Query 009914
Match_columns 522
No_of_seqs 651 out of 2702
Neff 10.9
Searched_HMMs 46136
Date Thu Mar 28 18:50:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009914.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009914hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 5E-40 1.1E-44 299.5 25.4 399 3-439 26-436 (448)
2 COG2814 AraJ Arabinose efflux 100.0 1E-37 2.2E-42 289.3 39.3 353 3-391 10-364 (394)
3 KOG1330 Sugar transporter/spin 100.0 4E-40 8.7E-45 302.9 19.5 385 1-393 28-418 (493)
4 PRK03545 putative arabinose tr 100.0 4.6E-36 1E-40 293.4 38.9 351 3-391 6-358 (390)
5 PRK09556 uhpT sugar phosphate 100.0 3.5E-36 7.5E-41 300.6 34.8 369 4-386 27-411 (467)
6 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2.2E-35 4.7E-40 289.6 36.4 378 2-392 4-400 (412)
7 PRK10642 proline/glycine betai 100.0 4.4E-35 9.5E-40 294.1 39.0 369 5-388 15-405 (490)
8 PRK11663 regulatory protein Uh 100.0 4.8E-35 1E-39 289.6 38.6 372 4-391 21-402 (434)
9 PRK11551 putative 3-hydroxyphe 100.0 5.7E-35 1.2E-39 287.8 38.1 358 3-388 12-371 (406)
10 PRK14995 methyl viologen resis 100.0 3.7E-34 8E-39 287.6 42.9 373 1-388 1-414 (495)
11 PRK12307 putative sialic acid 100.0 1.7E-34 3.7E-39 286.3 37.4 367 3-390 15-385 (426)
12 TIGR00890 2A0111 Oxalate/Forma 100.0 3.4E-34 7.3E-39 279.8 36.0 358 4-391 2-360 (377)
13 TIGR00903 2A0129 major facilit 100.0 1.1E-33 2.4E-38 271.5 37.3 336 18-385 3-340 (368)
14 PRK10213 nepI ribonucleoside t 100.0 2.5E-33 5.4E-38 273.3 40.2 351 3-391 17-369 (394)
15 TIGR00891 2A0112 putative sial 100.0 4.2E-34 9.2E-39 281.9 35.1 371 3-391 9-394 (405)
16 TIGR00892 2A0113 monocarboxyla 100.0 6E-34 1.3E-38 282.7 35.9 373 4-391 17-399 (455)
17 PRK09705 cynX putative cyanate 100.0 1.4E-33 2.9E-38 275.5 37.8 332 23-391 26-359 (393)
18 TIGR00893 2A0114 d-galactonate 100.0 3.2E-34 6.9E-39 282.0 33.0 364 15-390 3-375 (399)
19 TIGR01299 synapt_SV2 synaptic 100.0 7.2E-34 1.6E-38 289.9 36.2 371 4-387 165-710 (742)
20 PRK11273 glpT sn-glycerol-3-ph 100.0 2.9E-33 6.2E-38 278.4 39.0 371 4-391 27-413 (452)
21 PLN00028 nitrate transmembrane 100.0 1.3E-33 2.8E-38 281.7 36.5 363 4-380 34-402 (476)
22 PRK10406 alpha-ketoglutarate t 100.0 7.7E-33 1.7E-37 273.9 39.6 358 4-387 20-398 (432)
23 PRK03893 putative sialic acid 100.0 2.2E-33 4.7E-38 284.0 36.5 372 3-391 17-431 (496)
24 PRK03699 putative transporter; 100.0 7.2E-33 1.6E-37 271.0 38.6 354 2-391 3-358 (394)
25 TIGR00900 2A0121 H+ Antiporter 100.0 2.8E-33 6E-38 272.1 35.1 353 10-387 3-363 (365)
26 TIGR00897 2A0118 polyol permea 100.0 3.9E-32 8.4E-37 266.4 41.8 362 5-391 12-379 (402)
27 PRK10091 MFS transport protein 100.0 8.2E-33 1.8E-37 269.4 36.6 351 6-392 3-355 (382)
28 PRK10489 enterobactin exporter 100.0 2.8E-33 6E-38 276.4 32.9 353 8-391 19-377 (417)
29 PRK15034 nitrate/nitrite trans 100.0 6.7E-32 1.5E-36 260.2 41.1 383 5-440 33-457 (462)
30 PRK15402 multidrug efflux syst 100.0 6.9E-32 1.5E-36 265.6 41.2 357 5-387 12-370 (406)
31 PRK10504 putative transporter; 100.0 1.7E-32 3.6E-37 275.4 37.5 372 5-392 9-419 (471)
32 TIGR00894 2A0114euk Na(+)-depe 100.0 3.8E-34 8.2E-39 286.5 25.3 377 2-387 15-422 (465)
33 PRK15075 citrate-proton sympor 100.0 3.5E-32 7.5E-37 269.4 38.5 365 3-391 12-397 (434)
34 PRK10077 xylE D-xylose transpo 100.0 2.4E-32 5.1E-37 275.3 37.8 373 5-385 11-424 (479)
35 PRK03633 putative MFS family t 100.0 1.3E-31 2.9E-36 261.0 41.3 349 1-391 1-350 (381)
36 PRK09952 shikimate transporter 100.0 5.4E-32 1.2E-36 267.8 38.2 366 3-388 19-407 (438)
37 TIGR00881 2A0104 phosphoglycer 100.0 5.2E-33 1.1E-37 271.6 30.6 366 13-392 2-376 (379)
38 PF07690 MFS_1: Major Facilita 100.0 5.7E-33 1.2E-37 268.5 29.8 346 11-378 1-352 (352)
39 PRK05122 major facilitator sup 100.0 9.2E-32 2E-36 264.3 38.7 347 3-391 12-367 (399)
40 TIGR00710 efflux_Bcr_CflA drug 100.0 1E-31 2.2E-36 263.0 38.8 355 3-384 2-358 (385)
41 PRK11043 putative transporter; 100.0 2.5E-31 5.4E-36 261.3 39.8 352 5-387 5-357 (401)
42 TIGR00711 efflux_EmrB drug res 100.0 5.2E-32 1.1E-36 273.4 35.9 368 6-387 2-410 (485)
43 PRK12382 putative transporter; 100.0 4.2E-31 9.2E-36 258.8 39.6 345 5-391 14-367 (392)
44 COG2223 NarK Nitrate/nitrite t 100.0 5.4E-32 1.2E-36 247.8 30.0 359 2-391 10-379 (417)
45 PRK15403 multidrug efflux syst 100.0 1.1E-30 2.4E-35 256.2 41.0 348 12-387 22-373 (413)
46 PRK11646 multidrug resistance 100.0 1.1E-30 2.4E-35 255.2 40.5 347 9-390 13-362 (400)
47 TIGR00712 glpT glycerol-3-phos 100.0 1.7E-31 3.6E-36 264.9 35.1 371 4-391 25-411 (438)
48 TIGR00895 2A0115 benzoate tran 100.0 4E-32 8.7E-37 267.2 30.4 363 4-384 15-397 (398)
49 TIGR00879 SP MFS transporter, 100.0 1E-31 2.3E-36 271.1 32.4 370 10-392 32-449 (481)
50 PRK11195 lysophospholipid tran 100.0 2.4E-30 5.3E-35 252.2 39.5 347 8-385 5-354 (393)
51 TIGR00887 2A0109 phosphate:H+ 100.0 4.1E-31 8.8E-36 266.4 34.8 375 4-387 14-454 (502)
52 PRK09874 drug efflux system pr 100.0 2.1E-30 4.6E-35 255.7 38.7 353 5-391 13-376 (408)
53 PRK11652 emrD multidrug resist 100.0 4.1E-30 8.8E-35 252.0 39.7 354 3-387 5-360 (394)
54 PRK10054 putative transporter; 100.0 1.5E-30 3.3E-35 253.8 35.5 351 5-391 6-362 (395)
55 PRK10473 multidrug efflux syst 100.0 1.3E-29 2.8E-34 248.3 40.0 347 7-391 4-352 (392)
56 PRK10133 L-fucose transporter; 100.0 9.6E-30 2.1E-34 250.7 38.9 357 4-387 24-407 (438)
57 TIGR00899 2A0120 sugar efflux 100.0 8.2E-30 1.8E-34 248.6 36.1 343 12-391 3-352 (375)
58 TIGR00902 2A0127 phenyl propri 100.0 3.5E-29 7.5E-34 243.8 37.8 345 9-390 7-357 (382)
59 cd06174 MFS The Major Facilita 100.0 2.4E-29 5.2E-34 243.0 36.2 326 10-391 3-330 (352)
60 PF05977 MFS_3: Transmembrane 100.0 1.4E-29 3.1E-34 250.3 35.0 357 4-390 8-371 (524)
61 TIGR00885 fucP L-fucose:H+ sym 100.0 6.1E-29 1.3E-33 242.8 38.4 352 6-387 3-381 (410)
62 PRK11010 ampG muropeptide tran 100.0 8.1E-29 1.7E-33 247.6 40.1 358 5-391 11-381 (491)
63 PRK11102 bicyclomycin/multidru 100.0 4E-29 8.6E-34 243.8 36.5 333 21-379 6-341 (377)
64 TIGR00886 2A0108 nitrite extru 100.0 2E-29 4.3E-34 245.0 33.6 352 8-373 3-365 (366)
65 KOG2532 Permease of the major 100.0 7.4E-31 1.6E-35 254.9 23.3 346 34-386 66-418 (466)
66 PRK15011 sugar efflux transpor 100.0 6.1E-28 1.3E-32 236.0 40.9 349 6-391 15-369 (393)
67 TIGR00896 CynX cyanate transpo 100.0 1.3E-28 2.9E-33 237.8 34.0 335 22-391 16-352 (355)
68 PRK11902 ampG muropeptide tran 100.0 2.1E-27 4.5E-32 233.1 40.1 349 11-391 4-368 (402)
69 TIGR00883 2A0106 metabolite-pr 100.0 1.5E-28 3.2E-33 241.4 31.2 351 16-388 3-376 (394)
70 PRK11128 putative 3-phenylprop 100.0 1.2E-27 2.5E-32 233.2 36.9 342 12-390 10-357 (382)
71 PRK09528 lacY galactoside perm 100.0 3.7E-28 8.1E-33 240.0 33.2 358 5-391 9-381 (420)
72 TIGR00898 2A0119 cation transp 100.0 2.9E-29 6.4E-34 254.2 25.1 337 27-386 110-470 (505)
73 COG0738 FucP Fucose permease [ 100.0 4.9E-27 1.1E-31 213.7 35.2 356 3-387 10-384 (422)
74 PRK06814 acylglycerophosphoeth 100.0 1.3E-27 2.9E-32 264.6 38.5 328 41-390 52-399 (1140)
75 TIGR00889 2A0110 nucleoside tr 100.0 2.4E-27 5.2E-32 232.6 35.9 346 11-388 7-372 (418)
76 KOG0569 Permease of the major 100.0 5.3E-27 1.2E-31 224.9 37.0 400 13-450 18-464 (485)
77 KOG2533 Permease of the major 100.0 2.3E-28 4.9E-33 237.9 26.5 277 9-287 48-337 (495)
78 TIGR00901 2A0125 AmpG-related 100.0 3.2E-27 6.9E-32 228.3 32.9 325 22-371 4-355 (356)
79 TIGR00924 yjdL_sub1_fam amino 100.0 2.9E-26 6.3E-31 228.0 38.8 378 4-387 8-443 (475)
80 TIGR00792 gph sugar (Glycoside 100.0 2.8E-27 6.1E-32 235.5 31.6 342 26-392 20-384 (437)
81 TIGR00882 2A0105 oligosacchari 100.0 1.9E-26 4.1E-31 226.1 35.7 356 7-391 3-373 (396)
82 KOG2504 Monocarboxylate transp 100.0 1.6E-27 3.4E-32 234.7 27.4 373 5-394 45-457 (509)
83 TIGR00805 oat sodium-independe 100.0 4.6E-27 1E-31 239.9 30.7 282 8-289 35-397 (633)
84 TIGR02718 sider_RhtX_FptX side 100.0 1.4E-25 3.1E-30 219.4 39.4 356 8-391 3-369 (390)
85 COG2807 CynX Cyanate permease 100.0 1.8E-25 3.9E-30 200.3 36.2 338 19-392 25-364 (395)
86 PRK08633 2-acyl-glycerophospho 100.0 6.1E-26 1.3E-30 252.5 40.8 361 6-386 9-383 (1146)
87 PRK10207 dipeptide/tripeptide 100.0 1.1E-25 2.4E-30 223.7 37.3 375 3-384 11-438 (489)
88 KOG3764 Vesicular amine transp 100.0 1.5E-27 3.3E-32 215.2 18.3 327 34-392 99-433 (464)
89 PRK10429 melibiose:sodium symp 100.0 9.4E-25 2E-29 218.2 36.2 373 2-392 2-397 (473)
90 TIGR00806 rfc RFC reduced fola 100.0 2.2E-25 4.7E-30 210.4 29.3 341 21-379 41-407 (511)
91 KOG2615 Permease of the major 99.9 3.1E-26 6.7E-31 205.5 19.8 342 37-390 64-417 (451)
92 PRK09669 putative symporter Ya 99.9 2E-24 4.3E-29 214.7 33.6 359 8-392 11-392 (444)
93 PF03825 Nuc_H_symport: Nucleo 99.9 2E-23 4.4E-28 200.9 35.3 353 11-391 7-367 (400)
94 PTZ00207 hypothetical protein; 99.9 4.7E-23 1E-27 204.5 38.3 369 3-388 25-515 (591)
95 PRK09584 tppB putative tripept 99.9 2.3E-23 4.9E-28 208.5 36.5 370 6-387 21-440 (500)
96 COG2211 MelB Na+/melibiose sym 99.9 1.4E-22 3E-27 192.6 36.9 409 6-448 12-444 (467)
97 PF06609 TRI12: Fungal trichot 99.9 2.2E-22 4.7E-27 198.3 39.6 358 12-386 50-466 (599)
98 PRK11462 putative transporter; 99.9 2.9E-22 6.2E-27 198.8 39.5 358 9-393 12-392 (460)
99 KOG0254 Predicted transporter 99.9 2.2E-23 4.8E-28 210.2 30.9 365 11-387 50-457 (513)
100 TIGR00788 fbt folate/biopterin 99.9 2.6E-23 5.7E-28 206.3 28.3 371 5-390 25-415 (468)
101 KOG0252 Inorganic phosphate tr 99.9 2.3E-24 5E-29 198.3 17.6 373 6-387 41-468 (538)
102 PF11700 ATG22: Vacuole efflux 99.9 6.1E-21 1.3E-25 187.2 40.4 340 41-389 70-444 (477)
103 KOG0253 Synaptic vesicle trans 99.9 6.3E-23 1.4E-27 183.0 23.7 358 4-381 76-490 (528)
104 PF13347 MFS_2: MFS/sugar tran 99.9 7.3E-23 1.6E-27 202.5 26.6 344 26-394 22-390 (428)
105 PRK09848 glucuronide transport 99.9 9.7E-22 2.1E-26 195.8 34.8 357 6-392 8-392 (448)
106 PF01306 LacY_symp: LacY proto 99.9 1.1E-21 2.3E-26 184.9 30.9 359 3-391 4-378 (412)
107 TIGR01301 GPH_sucrose GPH fami 99.9 8.9E-21 1.9E-25 184.7 37.4 374 8-390 6-446 (477)
108 PRK15462 dipeptide/tripeptide 99.9 3.3E-20 7.1E-25 181.5 41.2 374 4-387 7-436 (493)
109 KOG2563 Permease of the major 99.9 2.8E-22 6.1E-27 184.9 22.5 370 2-389 41-423 (480)
110 KOG0255 Synaptic vesicle trans 99.9 1.5E-21 3.3E-26 198.2 29.9 332 34-386 111-467 (521)
111 PF00083 Sugar_tr: Sugar (and 99.9 3E-28 6.5E-33 243.4 -20.0 365 11-387 5-411 (451)
112 KOG4686 Predicted sugar transp 99.9 1.4E-23 3E-28 180.5 6.0 365 4-392 42-419 (459)
113 TIGR01272 gluP glucose/galacto 99.9 4.5E-19 9.7E-24 166.3 26.3 273 90-391 6-293 (310)
114 COG2270 Permeases of the major 99.8 2.4E-18 5.2E-23 158.4 27.2 329 40-388 57-404 (438)
115 PF03209 PUCC: PUCC protein; 99.8 2E-17 4.3E-22 153.1 31.9 333 31-388 5-364 (403)
116 COG3104 PTR2 Dipeptide/tripept 99.8 8.6E-17 1.9E-21 151.7 31.5 372 4-382 19-451 (498)
117 KOG3626 Organic anion transpor 99.8 8.2E-18 1.8E-22 166.9 25.8 284 6-289 97-459 (735)
118 PF03137 OATP: Organic Anion T 99.8 1.8E-20 3.9E-25 186.5 -1.1 377 8-387 5-514 (539)
119 KOG2325 Predicted transporter/ 99.8 2.1E-17 4.5E-22 157.8 16.8 375 2-392 30-454 (488)
120 PF03092 BT1: BT1 family; Int 99.7 1E-15 2.2E-20 150.1 22.1 350 25-390 9-382 (433)
121 KOG2816 Predicted transporter 99.7 6.1E-15 1.3E-19 143.2 22.6 359 8-390 24-395 (463)
122 TIGR00880 2_A_01_02 Multidrug 99.6 7.6E-15 1.6E-19 121.2 13.3 136 47-187 4-139 (141)
123 TIGR00889 2A0110 nucleoside tr 99.6 3.4E-14 7.3E-19 139.7 20.0 180 11-190 213-406 (418)
124 PF05631 DUF791: Protein of un 99.6 1.2E-12 2.7E-17 119.6 27.1 256 13-285 41-304 (354)
125 TIGR01299 synapt_SV2 synaptic 99.6 1.6E-13 3.5E-18 141.2 22.0 138 44-187 598-735 (742)
126 PRK10642 proline/glycine betai 99.6 6.7E-13 1.5E-17 133.7 23.8 171 19-193 263-437 (490)
127 PRK05122 major facilitator sup 99.6 4.4E-13 9.6E-18 131.8 21.7 162 22-190 232-393 (399)
128 PRK11551 putative 3-hydroxyphe 99.6 6E-13 1.3E-17 131.2 22.2 170 14-187 228-397 (406)
129 cd06174 MFS The Major Facilita 99.5 5.3E-13 1.1E-17 128.8 20.7 171 9-184 178-350 (352)
130 PRK15011 sugar efflux transpor 99.5 1.1E-12 2.4E-17 128.5 22.8 155 25-185 235-390 (393)
131 PRK09528 lacY galactoside perm 99.5 2.7E-13 5.9E-18 134.1 18.6 149 35-188 256-405 (420)
132 PF06963 FPN1: Ferroportin1 (F 99.5 8.8E-11 1.9E-15 112.9 34.9 363 6-379 2-410 (432)
133 TIGR00902 2A0127 phenyl propri 99.5 1.5E-12 3.3E-17 127.0 22.4 167 8-181 207-374 (382)
134 PRK09874 drug efflux system pr 99.5 6.1E-13 1.3E-17 131.3 19.6 161 21-186 234-398 (408)
135 TIGR00890 2A0111 Oxalate/Forma 99.5 4.4E-13 9.5E-18 130.8 18.4 161 14-179 213-375 (377)
136 PF01770 Folate_carrier: Reduc 99.5 5E-11 1.1E-15 112.4 30.5 340 23-377 21-392 (412)
137 PRK10489 enterobactin exporter 99.5 1.8E-12 3.8E-17 128.2 21.0 157 25-186 242-399 (417)
138 PRK03545 putative arabinose tr 99.5 3.4E-12 7.3E-17 125.0 22.6 158 25-189 225-383 (390)
139 PRK03633 putative MFS family t 99.5 3E-12 6.5E-17 124.9 21.9 155 23-185 217-371 (381)
140 TIGR00899 2A0120 sugar efflux 99.5 4.3E-12 9.2E-17 123.8 21.9 149 31-185 225-373 (375)
141 PRK12382 putative transporter; 99.5 2.1E-12 4.5E-17 126.7 19.8 157 22-185 232-388 (392)
142 PRK09556 uhpT sugar phosphate 99.5 1.9E-12 4.1E-17 129.8 19.6 178 8-185 260-448 (467)
143 TIGR00879 SP MFS transporter, 99.4 3.6E-12 7.9E-17 128.6 18.6 178 7-189 285-473 (481)
144 TIGR00897 2A0118 polyol permea 99.4 1.4E-11 3.1E-16 121.0 22.1 170 9-185 225-400 (402)
145 PRK03699 putative transporter; 99.4 6.2E-12 1.3E-16 123.2 19.4 173 8-186 207-380 (394)
146 TIGR00892 2A0113 monocarboxyla 99.4 2.3E-12 5E-17 128.4 16.5 169 8-181 243-416 (455)
147 PRK03893 putative sialic acid 99.4 7.7E-12 1.7E-16 126.8 19.1 148 25-177 294-444 (496)
148 PRK09705 cynX putative cyanate 99.4 2.4E-11 5.2E-16 118.9 21.1 173 10-188 209-383 (393)
149 PRK11128 putative 3-phenylprop 99.4 3.7E-11 8.1E-16 117.2 22.3 164 11-181 210-374 (382)
150 KOG3098 Uncharacterized conser 99.4 9.2E-10 2E-14 105.7 30.4 359 9-381 12-408 (461)
151 TIGR00883 2A0106 metabolite-pr 99.4 1.1E-11 2.5E-16 121.6 18.2 164 8-176 221-391 (394)
152 PRK11010 ampG muropeptide tran 99.4 1.7E-10 3.8E-15 115.8 26.6 156 27-187 244-404 (491)
153 PRK10504 putative transporter; 99.4 3.7E-11 8.1E-16 120.9 21.3 148 9-156 264-415 (471)
154 COG2271 UhpC Sugar phosphate p 99.4 3.8E-12 8.3E-17 117.7 12.7 131 247-391 52-184 (448)
155 COG2814 AraJ Arabinose efflux 99.4 5.7E-11 1.2E-15 111.5 20.6 176 4-186 210-386 (394)
156 PF05977 MFS_3: Transmembrane 99.4 5E-11 1.1E-15 118.8 21.5 160 20-184 232-392 (524)
157 PF11700 ATG22: Vacuole efflux 99.4 9.6E-11 2.1E-15 115.6 21.8 178 5-186 280-468 (477)
158 PRK09952 shikimate transporter 99.4 1.5E-10 3.3E-15 114.9 23.0 161 23-186 267-433 (438)
159 TIGR00893 2A0114 d-galactonate 99.4 5.7E-11 1.2E-15 116.6 19.8 172 7-184 216-397 (399)
160 TIGR00891 2A0112 putative sial 99.3 4.8E-11 1E-15 117.6 18.2 137 30-171 263-401 (405)
161 PRK11663 regulatory protein Uh 99.3 9.5E-11 2.1E-15 116.3 20.1 175 8-187 245-425 (434)
162 PRK11273 glpT sn-glycerol-3-ph 99.3 9.7E-11 2.1E-15 116.9 20.0 174 8-186 255-435 (452)
163 PRK10077 xylE D-xylose transpo 99.3 1.6E-10 3.4E-15 116.7 21.5 166 24-189 289-460 (479)
164 TIGR02718 sider_RhtX_FptX side 99.3 1.8E-10 3.8E-15 112.9 21.2 152 25-181 227-386 (390)
165 PRK12307 putative sialic acid 99.3 1.4E-10 3.1E-15 115.1 20.3 140 25-169 250-391 (426)
166 TIGR00900 2A0121 H+ Antiporter 99.3 1E-10 2.2E-15 113.5 18.2 130 27-156 232-363 (365)
167 TIGR00712 glpT glycerol-3-phos 99.3 7.1E-11 1.5E-15 117.5 16.5 136 246-391 49-184 (438)
168 PF06813 Nodulin-like: Nodulin 99.3 3.2E-10 6.9E-15 100.7 18.5 150 4-156 1-157 (250)
169 TIGR00895 2A0115 benzoate tran 99.3 1.7E-10 3.8E-15 113.3 18.5 145 9-153 253-397 (398)
170 TIGR00882 2A0105 oligosacchari 99.3 2.6E-10 5.6E-15 112.0 19.6 143 37-184 250-393 (396)
171 PRK15402 multidrug efflux syst 99.3 8.2E-10 1.8E-14 108.9 23.0 155 25-185 234-394 (406)
172 PRK15075 citrate-proton sympor 99.3 4.3E-10 9.2E-15 111.7 21.1 139 18-156 250-394 (434)
173 KOG3762 Predicted transporter 99.3 2.5E-11 5.4E-16 115.3 11.2 163 214-390 360-524 (618)
174 PRK10054 putative transporter; 99.3 1.9E-10 4.2E-15 112.5 17.8 153 34-192 237-390 (395)
175 PRK10213 nepI ribonucleoside t 99.3 1.1E-09 2.4E-14 107.2 22.7 150 27-182 238-387 (394)
176 PRK11646 multidrug resistance 99.3 3.4E-10 7.4E-15 111.0 18.6 162 26-189 228-391 (400)
177 PRK10406 alpha-ketoglutarate t 99.2 1.2E-09 2.6E-14 108.5 22.2 159 22-185 259-423 (432)
178 PRK11902 ampG muropeptide tran 99.2 1.6E-09 3.4E-14 106.6 22.6 150 29-187 233-391 (402)
179 TIGR00887 2A0109 phosphate:H+ 99.2 3.5E-10 7.5E-15 114.5 18.3 166 21-186 303-489 (502)
180 PF03825 Nuc_H_symport: Nucleo 99.2 1.8E-09 4E-14 104.5 21.4 182 8-189 209-398 (400)
181 COG2270 Permeases of the major 99.2 5.3E-10 1.1E-14 103.9 16.7 156 26-185 273-428 (438)
182 PRK15462 dipeptide/tripeptide 99.2 3.7E-10 8.1E-15 111.2 16.6 142 237-391 22-167 (493)
183 TIGR00769 AAA ADP/ATP carrier 99.2 9E-07 2E-11 86.6 39.4 278 5-289 6-333 (472)
184 KOG2504 Monocarboxylate transp 99.2 2.3E-10 5E-15 113.6 14.9 177 6-186 298-476 (509)
185 TIGR00792 gph sugar (Glycoside 99.2 1.7E-09 3.6E-14 107.8 21.4 147 9-156 225-380 (437)
186 TIGR00710 efflux_Bcr_CflA drug 99.2 5.1E-10 1.1E-14 109.5 16.9 133 245-391 26-158 (385)
187 PRK10091 MFS transport protein 99.2 2E-09 4.3E-14 105.1 20.9 153 27-185 221-375 (382)
188 TIGR00898 2A0119 cation transp 99.2 9.1E-10 2E-14 111.9 19.2 146 32-187 349-496 (505)
189 COG2223 NarK Nitrate/nitrite t 99.2 3.9E-10 8.4E-15 104.8 14.7 178 5-187 217-402 (417)
190 PF01306 LacY_symp: LacY proto 99.2 9.1E-10 2E-14 104.7 17.3 149 37-190 255-404 (412)
191 TIGR00924 yjdL_sub1_fam amino 99.2 4.9E-10 1.1E-14 112.0 16.5 151 227-391 12-170 (475)
192 KOG3574 Acetyl-CoA transporter 99.2 2.9E-09 6.3E-14 96.8 19.4 369 4-391 29-434 (510)
193 PLN00028 nitrate transmembrane 99.2 8.6E-10 1.9E-14 110.6 18.0 153 26-185 272-432 (476)
194 TIGR02332 HpaX 4-hydroxyphenyl 99.2 1.7E-09 3.8E-14 106.4 19.4 128 246-386 30-157 (412)
195 TIGR01272 gluP glucose/galacto 99.2 4.8E-09 1E-13 98.6 20.4 160 7-174 141-303 (310)
196 PRK08633 2-acyl-glycerophospho 99.2 1.2E-09 2.7E-14 122.4 19.3 147 28-178 255-402 (1146)
197 PRK11195 lysophospholipid tran 99.2 3.3E-09 7.1E-14 103.8 19.9 147 30-183 230-377 (393)
198 TIGR00926 2A1704 Peptide:H+ sy 99.1 6E-08 1.3E-12 99.2 29.0 161 24-184 6-180 (654)
199 PRK09584 tppB putative tripept 99.1 2E-09 4.3E-14 108.3 18.1 152 227-391 23-179 (500)
200 TIGR00896 CynX cyanate transpo 99.1 2.1E-09 4.6E-14 103.9 17.5 144 12-156 203-348 (355)
201 PF02487 CLN3: CLN3 protein; 99.1 4.7E-08 1E-12 92.5 25.1 316 43-384 61-394 (402)
202 PRK10207 dipeptide/tripeptide 99.1 1.8E-09 3.9E-14 108.0 16.6 142 237-391 27-172 (489)
203 PRK15034 nitrate/nitrite trans 99.1 5E-09 1.1E-13 102.1 19.1 175 8-187 254-455 (462)
204 PRK06814 acylglycerophosphoeth 99.1 1.8E-09 3.9E-14 120.6 17.9 168 8-179 227-415 (1140)
205 TIGR00901 2A0125 AmpG-related 99.1 3.5E-09 7.5E-14 102.4 17.5 130 11-140 214-355 (356)
206 PRK14995 methyl viologen resis 99.1 3.3E-09 7.2E-14 107.1 17.8 142 15-156 268-413 (495)
207 TIGR00711 efflux_EmrB drug res 99.1 3.2E-09 6.9E-14 107.4 17.7 145 12-156 261-410 (485)
208 PRK10473 multidrug efflux syst 99.1 2.1E-08 4.5E-13 98.4 22.4 135 31-175 229-363 (392)
209 KOG4686 Predicted sugar transp 99.1 1E-08 2.2E-13 89.6 17.0 151 30-184 289-441 (459)
210 TIGR00903 2A0129 major facilit 99.1 1.3E-08 2.8E-13 98.3 19.8 169 7-186 193-365 (368)
211 PRK11102 bicyclomycin/multidru 99.1 2.7E-09 5.9E-14 104.1 15.4 133 245-391 12-144 (377)
212 PF07690 MFS_1: Major Facilita 99.1 3.7E-10 8E-15 109.0 8.9 135 244-392 16-151 (352)
213 TIGR00881 2A0104 phosphoglycer 99.1 3.8E-09 8.2E-14 103.0 15.7 156 8-168 218-379 (379)
214 TIGR00894 2A0114euk Na(+)-depe 99.1 1.5E-08 3.2E-13 101.9 20.1 178 6-186 261-450 (465)
215 PRK10133 L-fucose transporter; 99.0 2E-08 4.4E-13 99.5 20.2 142 33-182 287-429 (438)
216 KOG4332 Predicted sugar transp 99.0 2.1E-08 4.6E-13 86.9 16.5 332 15-371 46-390 (454)
217 PRK11652 emrD multidrug resist 99.0 1.5E-08 3.3E-13 99.4 18.0 133 245-391 29-161 (394)
218 PRK09848 glucuronide transport 99.0 3E-08 6.4E-13 99.1 20.3 149 8-156 230-388 (448)
219 KOG0637 Sucrose transporter an 99.0 1E-08 2.2E-13 96.0 15.2 148 6-153 32-202 (498)
220 TIGR00885 fucP L-fucose:H+ sym 99.0 1.4E-08 3E-13 99.7 16.9 133 245-387 24-156 (410)
221 KOG0569 Permease of the major 99.0 6E-08 1.3E-12 94.3 20.7 180 5-190 269-458 (485)
222 PRK11043 putative transporter; 99.0 9.7E-08 2.1E-12 94.0 22.8 131 25-156 222-357 (401)
223 PRK15403 multidrug efflux syst 99.0 1.8E-08 4E-13 99.2 17.0 131 247-391 39-169 (413)
224 PF13347 MFS_2: MFS/sugar tran 99.0 2.3E-08 5E-13 99.2 17.0 151 6-156 225-384 (428)
225 COG0477 ProP Permeases of the 99.0 5.4E-08 1.2E-12 92.0 18.6 165 11-178 7-177 (338)
226 TIGR00886 2A0108 nitrite extru 99.0 2.7E-08 5.9E-13 96.6 16.7 134 241-387 18-152 (366)
227 PTZ00207 hypothetical protein; 98.9 4.6E-08 1E-12 98.3 17.3 136 241-385 44-179 (591)
228 PF13000 Acatn: Acetyl-coenzym 98.9 4E-07 8.7E-12 86.8 22.2 372 9-387 3-467 (544)
229 KOG0253 Synaptic vesicle trans 98.9 1.3E-08 2.8E-13 92.5 11.2 135 50-191 390-524 (528)
230 PRK09669 putative symporter Ya 98.9 1.2E-07 2.5E-12 94.6 19.4 146 11-156 234-388 (444)
231 COG2807 CynX Cyanate permease 98.9 1.9E-07 4.2E-12 85.3 18.2 172 10-186 212-385 (395)
232 KOG3762 Predicted transporter 98.9 2.8E-08 6.2E-13 94.9 13.2 168 12-184 377-545 (618)
233 TIGR00806 rfc RFC reduced fola 98.9 1.7E-07 3.7E-12 90.1 17.8 130 247-392 49-179 (511)
234 TIGR00788 fbt folate/biopterin 98.8 3.5E-08 7.5E-13 98.5 12.8 123 34-156 281-413 (468)
235 PRK10429 melibiose:sodium symp 98.8 1E-07 2.3E-12 95.7 16.2 151 6-156 231-393 (473)
236 TIGR01301 GPH_sucrose GPH fami 98.8 7.1E-08 1.5E-12 94.8 13.0 136 243-384 23-175 (477)
237 KOG2615 Permease of the major 98.8 1.3E-08 2.8E-13 93.1 6.3 118 255-386 64-181 (451)
238 KOG2532 Permease of the major 98.7 1.5E-07 3.4E-12 92.4 13.8 156 253-443 67-222 (466)
239 KOG1330 Sugar transporter/spin 98.7 5.1E-09 1.1E-13 98.4 2.1 129 253-394 62-190 (493)
240 TIGR00805 oat sodium-independe 98.7 5.6E-08 1.2E-12 100.2 9.4 137 247-388 56-235 (633)
241 TIGR00880 2_A_01_02 Multidrug 98.7 9.7E-08 2.1E-12 78.3 9.0 112 266-391 5-116 (141)
242 PF06779 DUF1228: Protein of u 98.7 2E-07 4.4E-12 66.7 9.1 80 18-97 4-83 (85)
243 KOG3764 Vesicular amine transp 98.7 1.7E-07 3.7E-12 86.4 10.1 161 21-186 285-454 (464)
244 PF05978 UNC-93: Ion channel r 98.6 2.5E-06 5.5E-11 70.0 15.6 109 46-155 42-150 (156)
245 COG2211 MelB Na+/melibiose sym 98.6 2.7E-06 5.8E-11 82.2 17.5 150 7-156 237-396 (467)
246 PF03209 PUCC: PUCC protein; 98.6 1E-05 2.2E-10 76.1 20.1 155 30-184 233-396 (403)
247 COG3104 PTR2 Dipeptide/tripept 98.6 3.6E-07 7.7E-12 87.4 9.9 174 231-440 28-209 (498)
248 PRK11462 putative transporter; 98.6 5.1E-06 1.1E-10 83.0 18.8 145 12-156 234-387 (460)
249 PF03219 TLC: TLC ATP/ADP tran 98.5 0.0007 1.5E-08 67.0 32.5 274 6-290 24-350 (491)
250 COG0738 FucP Fucose permease [ 98.5 7.4E-06 1.6E-10 76.3 17.2 166 6-179 236-402 (422)
251 PF12832 MFS_1_like: MFS_1 lik 98.5 1.2E-06 2.5E-11 62.5 9.0 71 10-80 4-74 (77)
252 KOG0255 Synaptic vesicle trans 98.5 3.9E-06 8.3E-11 85.7 15.4 121 253-387 112-232 (521)
253 KOG3810 Micronutrient transpor 98.5 9.9E-06 2.1E-10 73.5 15.7 339 25-378 24-379 (433)
254 COG3202 ATP/ADP translocase [E 98.4 0.0018 4E-08 62.3 34.2 273 6-289 27-352 (509)
255 KOG1237 H+/oligopeptide sympor 98.4 0.00021 4.6E-09 72.1 26.7 156 23-183 55-242 (571)
256 PF06609 TRI12: Fungal trichot 98.4 4.7E-06 1E-10 83.6 14.7 131 246-392 66-196 (599)
257 PF06813 Nodulin-like: Nodulin 98.4 8.5E-06 1.8E-10 72.7 14.6 138 239-385 17-155 (250)
258 KOG2533 Permease of the major 98.4 2E-06 4.4E-11 84.9 10.2 122 252-386 74-195 (495)
259 KOG1479 Nucleoside transporter 98.3 0.0002 4.3E-09 67.6 21.2 357 5-385 17-402 (406)
260 KOG0254 Predicted transporter 98.3 4.8E-05 1E-09 77.3 18.4 179 5-189 294-486 (513)
261 KOG0252 Inorganic phosphate tr 98.3 2.2E-05 4.7E-10 74.3 14.2 122 256-385 81-204 (538)
262 PF00854 PTR2: POT family; In 98.1 4.4E-05 9.5E-10 74.1 12.9 108 72-184 2-121 (372)
263 PF00083 Sugar_tr: Sugar (and 98.1 8.8E-08 1.9E-12 95.9 -7.2 113 259-381 46-158 (451)
264 PF05631 DUF791: Protein of un 98.0 0.00067 1.5E-08 63.0 17.6 125 252-391 62-192 (354)
265 KOG2816 Predicted transporter 98.0 0.00023 4.9E-09 70.1 14.8 124 31-155 267-391 (463)
266 KOG2325 Predicted transporter/ 97.9 2.8E-05 6.2E-10 75.4 7.7 130 248-387 58-191 (488)
267 TIGR00939 2a57 Equilibrative N 97.9 0.0021 4.5E-08 63.2 19.8 114 260-380 308-427 (437)
268 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.0011 2.5E-08 68.3 18.4 140 241-387 4-150 (654)
269 KOG2563 Permease of the major 97.8 0.00086 1.9E-08 63.8 14.3 133 247-387 67-202 (480)
270 PF07672 MFS_Mycoplasma: Mycop 97.8 0.00093 2E-08 58.9 13.5 247 126-384 2-265 (267)
271 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00017 3.8E-09 51.3 7.2 50 241-290 17-66 (77)
272 KOG2601 Iron transporter [Inor 97.6 0.0031 6.7E-08 58.2 14.4 167 6-177 27-217 (503)
273 PRK03612 spermidine synthase; 97.5 0.019 4.1E-07 57.9 20.8 165 12-182 20-193 (521)
274 KOG3880 Predicted small molecu 97.4 0.0014 3E-08 58.9 10.1 314 43-381 64-398 (409)
275 PF03092 BT1: BT1 family; Int 97.3 0.0019 4.1E-08 63.9 10.7 153 38-190 252-417 (433)
276 PF03137 OATP: Organic Anion T 97.1 8.9E-05 1.9E-09 74.8 -1.1 134 247-387 26-203 (539)
277 PF06963 FPN1: Ferroportin1 (F 96.9 0.089 1.9E-06 51.5 17.8 146 9-154 261-416 (432)
278 PRK03612 spermidine synthase; 96.9 0.06 1.3E-06 54.4 17.3 130 253-390 44-174 (521)
279 KOG3098 Uncharacterized conser 96.8 0.06 1.3E-06 52.7 15.6 145 8-153 242-411 (461)
280 PF05978 UNC-93: Ion channel r 96.8 0.079 1.7E-06 43.7 14.1 110 262-385 40-149 (156)
281 KOG3097 Predicted membrane pro 96.7 0.067 1.5E-06 48.9 13.9 139 7-152 30-179 (390)
282 PF02487 CLN3: CLN3 protein; 96.5 0.059 1.3E-06 51.8 12.8 112 39-154 279-395 (402)
283 COG0477 ProP Permeases of the 96.2 0.17 3.6E-06 47.2 14.4 131 246-387 24-158 (338)
284 TIGR00939 2a57 Equilibrative N 96.1 0.53 1.1E-05 46.5 17.7 34 323-358 105-138 (437)
285 KOG3626 Organic anion transpor 96.0 0.05 1.1E-06 56.0 10.4 139 252-391 125-303 (735)
286 KOG0637 Sucrose transporter an 96.0 0.013 2.8E-07 56.1 5.8 133 244-382 52-200 (498)
287 TIGR00769 AAA ADP/ATP carrier 95.9 0.37 8E-06 47.8 15.7 125 257-387 41-191 (472)
288 PF01733 Nucleoside_tran: Nucl 95.4 0.0032 6.9E-08 59.2 -0.9 113 263-380 186-303 (309)
289 PF01770 Folate_carrier: Reduc 95.1 0.35 7.5E-06 46.7 12.0 129 245-387 24-155 (412)
290 KOG1479 Nucleoside transporter 95.0 0.74 1.6E-05 44.2 13.5 36 324-361 117-152 (406)
291 PF06779 DUF1228: Protein of u 94.8 0.23 5E-06 35.8 7.5 49 241-289 9-57 (85)
292 COG4262 Predicted spermidine s 93.7 3.6 7.9E-05 38.4 14.4 143 36-184 38-189 (508)
293 PF00854 PTR2: POT family; In 92.9 0.29 6.2E-06 47.5 7.0 65 325-391 34-101 (372)
294 KOG4830 Predicted sugar transp 92.7 0.0053 1.2E-07 53.7 -4.7 64 10-73 21-93 (412)
295 KOG4332 Predicted sugar transp 92.6 2.2 4.7E-05 38.3 11.0 136 43-184 284-429 (454)
296 KOG1237 H+/oligopeptide sympor 92.3 3.7 8E-05 42.1 14.0 145 245-394 58-226 (571)
297 PF03547 Mem_trans: Membrane t 90.5 0.54 1.2E-05 45.9 5.9 14 273-286 9-22 (385)
298 KOG3574 Acetyl-CoA transporter 89.7 3.7 7.9E-05 39.0 9.9 65 225-291 31-100 (510)
299 PF02990 EMP70: Endomembrane p 87.5 12 0.00026 38.1 13.0 28 263-290 301-328 (521)
300 KOG3880 Predicted small molecu 86.9 3.1 6.8E-05 38.2 7.5 110 42-153 289-401 (409)
301 COG3202 ATP/ADP translocase [E 86.1 35 0.00077 33.9 14.6 43 345-387 168-210 (509)
302 KOG2568 Predicted membrane pro 83.2 52 0.0011 32.8 17.5 10 253-262 261-270 (518)
303 PF06912 DUF1275: Protein of u 82.6 32 0.0007 30.0 19.1 32 125-156 157-188 (209)
304 COG1230 CzcD Co/Zn/Cd efflux s 81.9 43 0.00093 30.9 14.5 73 8-86 27-102 (296)
305 PF01733 Nucleoside_tran: Nucl 79.8 0.71 1.5E-05 43.4 0.6 108 45-152 186-306 (309)
306 KOG3810 Micronutrient transpor 77.1 22 0.00048 33.6 9.2 96 43-138 273-370 (433)
307 PF11947 DUF3464: Protein of u 75.0 30 0.00065 28.3 8.4 80 63-146 56-146 (153)
308 COG5336 Uncharacterized protei 74.8 17 0.00037 27.3 6.3 30 44-73 45-75 (116)
309 COG5336 Uncharacterized protei 73.4 22 0.00047 26.8 6.6 36 356-391 37-72 (116)
310 PF11947 DUF3464: Protein of u 67.0 15 0.00032 30.0 5.1 45 327-375 100-144 (153)
311 KOG2601 Iron transporter [Inor 65.2 72 0.0016 30.7 9.7 30 358-387 172-201 (503)
312 PF11770 GAPT: GRB2-binding ad 63.5 7.1 0.00015 31.1 2.6 11 486-496 86-96 (158)
313 COG0861 TerC Membrane protein 62.9 1.2E+02 0.0026 27.5 18.3 62 106-174 28-89 (254)
314 PF03219 TLC: TLC ATP/ADP tran 62.9 1.8E+02 0.0039 29.5 21.7 79 99-182 287-366 (491)
315 PF07672 MFS_Mycoplasma: Mycop 61.5 1.3E+02 0.0028 27.4 11.2 93 45-138 145-250 (267)
316 PF02694 UPF0060: Uncharacteri 58.8 28 0.00061 26.2 4.9 53 39-91 52-104 (107)
317 TIGR00844 c_cpa1 na(+)/h(+) an 58.7 2.6E+02 0.0057 30.1 26.0 36 135-175 106-141 (810)
318 PF13000 Acatn: Acetyl-coenzym 57.9 2.2E+02 0.0047 28.8 14.7 58 96-153 407-464 (544)
319 PF07857 DUF1632: CEO family ( 55.6 37 0.0008 30.6 6.1 12 379-391 93-104 (254)
320 PF07760 DUF1616: Protein of u 53.9 1.9E+02 0.004 26.9 10.9 58 97-155 22-79 (287)
321 PRK10263 DNA translocase FtsK; 53.6 43 0.00094 37.6 7.3 16 372-387 142-157 (1355)
322 PRK02237 hypothetical protein; 53.3 52 0.0011 24.9 5.5 51 41-91 56-106 (109)
323 PHA03239 envelope glycoprotein 52.2 2.4E+02 0.0052 27.7 19.5 16 109-124 58-73 (429)
324 PF13386 DsbD_2: Cytochrome C 52.0 1.6E+02 0.0034 25.5 15.1 36 254-289 145-180 (199)
325 PRK10263 DNA translocase FtsK; 51.7 1.5E+02 0.0033 33.7 10.9 20 51-70 62-81 (1355)
326 PF11151 DUF2929: Protein of u 51.3 69 0.0015 21.2 6.1 45 140-189 12-56 (57)
327 KOG1278 Endosomal membrane pro 50.7 23 0.00051 35.3 4.3 41 246-286 345-386 (628)
328 PF11299 DUF3100: Protein of u 49.7 27 0.00058 30.6 4.1 55 98-153 175-229 (241)
329 PHA03242 envelope glycoprotein 48.5 78 0.0017 30.9 7.3 18 109-126 51-68 (428)
330 PF01528 Herpes_glycop: Herpes 48.2 69 0.0015 30.8 6.9 17 109-125 39-55 (374)
331 COG2836 Uncharacterized conser 47.9 2E+02 0.0042 25.4 16.5 34 255-288 160-193 (232)
332 COG4769 Predicted membrane pro 46.0 60 0.0013 26.7 5.2 51 51-107 83-133 (181)
333 PF12805 FUSC-like: FUSC-like 42.4 2.8E+02 0.0061 25.6 10.4 15 325-339 24-38 (284)
334 COG1268 BioY Uncharacterized c 42.3 1.7E+02 0.0036 25.0 7.6 23 48-70 89-111 (184)
335 COG4262 Predicted spermidine s 41.8 3.3E+02 0.0071 26.2 14.8 124 255-386 39-164 (508)
336 PF02632 BioY: BioY family; I 41.3 1.7E+02 0.0037 23.9 7.4 25 48-72 60-84 (148)
337 PF03606 DcuC: C4-dicarboxylat 40.7 2.9E+02 0.0063 27.8 10.5 19 168-186 5-23 (465)
338 PHA03237 envelope glycoprotein 40.4 3.2E+02 0.0068 26.9 10.0 18 109-126 50-67 (424)
339 COG3619 Predicted membrane pro 40.3 2.7E+02 0.0058 24.8 19.6 118 39-156 53-194 (226)
340 PF04346 EutH: Ethanolamine ut 40.0 3.4E+02 0.0074 25.9 16.8 107 42-154 48-161 (354)
341 PF05297 Herpes_LMP1: Herpesvi 39.5 5 0.00011 35.8 -1.7 30 357-386 131-160 (381)
342 PRK15086 ethanolamine utilizat 37.0 3.8E+02 0.0083 25.6 11.5 108 42-155 49-163 (372)
343 COG1457 CodB Purine-cytosine p 36.3 4.5E+02 0.0097 26.2 20.8 59 120-182 11-69 (442)
344 PF09527 ATPase_gene1: Putativ 36.1 1.2E+02 0.0026 19.6 6.1 33 49-81 8-41 (55)
345 PRK00293 dipZ thiol:disulfide 34.5 5.5E+02 0.012 26.7 21.2 31 256-286 322-352 (571)
346 PHA03242 envelope glycoprotein 33.8 4.7E+02 0.01 25.8 20.3 15 357-371 284-298 (428)
347 PF06679 DUF1180: Protein of u 32.0 24 0.00052 29.2 1.1 12 414-425 94-105 (163)
348 PF13940 Ldr_toxin: Toxin Ldr, 31.5 1.1E+02 0.0023 17.5 3.5 27 41-67 4-34 (35)
349 PF00558 Vpu: Vpu protein; In 30.0 1E+02 0.0022 22.1 3.7 18 427-444 17-34 (81)
350 COG4858 Uncharacterized membra 28.6 3.7E+02 0.0079 22.9 9.9 84 98-186 127-213 (226)
351 TIGR02230 ATPase_gene1 F0F1-AT 28.6 2.6E+02 0.0056 21.1 6.8 42 135-177 48-89 (100)
352 PF10225 DUF2215: Uncharacteri 28.2 4.5E+02 0.0098 23.8 8.9 31 322-355 32-62 (249)
353 PF03547 Mem_trans: Membrane t 27.7 5.7E+02 0.012 24.7 21.9 21 218-238 238-258 (385)
354 COG1288 Predicted membrane pro 27.4 5.7E+02 0.012 25.3 9.3 23 162-184 216-238 (481)
355 PF08611 DUF1774: Fungal prote 27.1 2.7E+02 0.0058 20.8 6.5 44 128-182 27-70 (97)
356 PLN03223 Polycystin cation cha 27.0 1.1E+03 0.023 27.6 12.4 12 359-370 1360-1371(1634)
357 PF03741 TerC: Integral membra 26.5 4.1E+02 0.0088 22.7 16.8 59 109-174 11-69 (183)
358 TIGR01667 YCCS_YHJK integral m 26.4 8.3E+02 0.018 26.2 12.3 17 323-339 80-96 (701)
359 PF07556 DUF1538: Protein of u 26.4 4.5E+02 0.0097 23.1 10.9 87 92-187 60-148 (212)
360 PF07857 DUF1632: CEO family ( 26.3 5E+02 0.011 23.6 11.2 9 245-253 198-207 (254)
361 PRK03818 putative transporter; 26.1 7.5E+02 0.016 25.6 11.1 102 42-144 436-539 (552)
362 PHA03231 glycoprotein BALF4; P 25.9 99 0.0021 33.1 4.5 18 367-384 680-697 (829)
363 PF12805 FUSC-like: FUSC-like 25.0 5.5E+02 0.012 23.7 9.7 36 75-110 3-39 (284)
364 TIGR01666 YCCS hypothetical me 24.8 8.9E+02 0.019 26.0 12.2 16 324-339 81-96 (704)
365 PHA03237 envelope glycoprotein 24.3 7E+02 0.015 24.6 20.3 8 66-73 18-25 (424)
366 PF10027 DUF2269: Predicted in 24.2 3.9E+02 0.0085 21.7 7.3 20 373-392 54-73 (150)
367 TIGR02230 ATPase_gene1 F0F1-AT 24.1 3.2E+02 0.0069 20.6 6.4 32 50-81 51-83 (100)
368 PF11833 DUF3353: Protein of u 24.0 4.7E+02 0.01 22.6 8.9 31 125-155 136-166 (194)
369 PF11298 DUF3099: Protein of u 23.4 2.7E+02 0.0058 19.6 4.8 59 64-126 10-68 (73)
370 PTZ00370 STEVOR; Provisional 23.4 2.7E+02 0.0058 25.5 6.1 13 427-439 269-281 (296)
371 PF14851 FAM176: FAM176 family 23.3 59 0.0013 26.6 1.9 14 417-430 23-36 (153)
372 KOG3817 Uncharacterized conser 22.8 1.7E+02 0.0036 27.7 4.8 14 278-291 178-191 (452)
373 PF05232 BTP: Bacterial Transm 22.7 2.6E+02 0.0057 19.1 6.3 49 23-71 16-64 (67)
374 PF04226 Transgly_assoc: Trans 22.6 2.1E+02 0.0046 18.0 5.1 22 162-183 22-43 (48)
375 PF05255 UPF0220: Uncharacteri 22.5 3.8E+02 0.0082 22.5 6.5 64 123-186 15-79 (166)
376 PF10785 NADH-u_ox-rdase: NADH 22.1 3.2E+02 0.0069 19.9 5.6 40 54-93 31-77 (86)
377 TIGR03802 Asp_Ala_antiprt aspa 21.4 9.3E+02 0.02 25.0 11.2 83 42-126 451-534 (562)
378 KOG3097 Predicted membrane pro 21.4 87 0.0019 29.6 2.8 71 39-109 308-382 (390)
379 COG2233 UraA Xanthine/uracil p 21.3 8.3E+02 0.018 24.4 12.7 122 6-129 16-140 (451)
380 PHA03239 envelope glycoprotein 21.1 7.2E+02 0.016 24.6 8.9 8 66-73 26-33 (429)
381 TIGR00801 ncs2 uracil-xanthine 20.7 8.2E+02 0.018 24.1 15.3 120 7-130 6-130 (415)
382 COG3619 Predicted membrane pro 20.2 6.2E+02 0.013 22.5 15.8 28 261-288 57-84 (226)
383 PF05297 Herpes_LMP1: Herpesvi 20.0 35 0.00076 30.7 0.0 30 261-290 107-136 (381)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-40 Score=299.47 Aligned_cols=399 Identities=18% Similarity=0.214 Sum_probs=319.0
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
.|+.+++.+++++...++.+..++...|.+.++.++|.+|+|++.+++.+.+.++.++.|.++||.+.|+.+..++++.+
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHH--HhhhcccccC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFS--VVMAPMTFMG 160 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~--~~l~~~~~~~ 160 (522)
+..++++++++.+.+.+..++.|..+|..+|++...+..|++++|||+..++.+...++|..+.|++. +++..+
T Consensus 106 i~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~---- 181 (448)
T COG2271 106 IVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH---- 181 (448)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc----
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 888777
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCC-----Cccc--ccchhhhhhHHHHHHhhhhhcchhHHHHHHH
Q 009914 161 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTAN-----SDQV--SSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQ 233 (522)
Q Consensus 161 ~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (522)
.+||..|++.++++++..++.++..+|.++...-.+. +..+ ++++..+.......-.+.+++||.+|.+.+.
T Consensus 182 -~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a 260 (448)
T COG2271 182 -GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALA 260 (448)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHH
Confidence 7999999999999999999988876654332111100 0000 0000000011222334678999999988777
Q ss_pred hhhccc-hhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHH
Q 009914 234 GVTGSF-PWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 311 (522)
Q Consensus 234 ~~~~~~-~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (522)
.++... =+++..|.|.|+. ..|+|..++++..+.+-++++.|.+++||++||+-+.++ .....+ ..+.+.+..
T Consensus 261 ~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR----~p~~~i-~~~~i~~~~ 335 (448)
T COG2271 261 NVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRR----GPMALI-FMLLITASL 335 (448)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccc----chHHHH-HHHHHHHHH
Confidence 666655 4889999999996 599999999999999999999999999999999753321 112211 122222222
Q ss_pred HHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHH-HhchhhHHHHHHHHHhhC
Q 009914 312 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESI-LSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~~g~l~~~~~g 390 (522)
+.+.. ....+.++..++++.+|+......- ..-....|..|++-.|++.|+...+.++ |.+.+....|++.|. +|
T Consensus 336 ~~~w~--~~~~~~~l~~~~l~~iGf~IyGPqm-LiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~-~g 411 (448)
T COG2271 336 VLYWL--APNGSYLLDAILLFIIGFLIYGPQM-LIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT-WG 411 (448)
T ss_pred HHHHc--CCCccHHHHHHHHHHHHHHHhhHHH-HHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec-CC
Confidence 22222 2233566778888899988777666 6777889999999999999999999999 888899999999998 78
Q ss_pred cccCCCCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 391 FKPIPKGSSATEEIATDRANAASLAKALYTAIGIPMALCCFIYSFLYST 439 (522)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (522)
|. +.+....+.++++.+++....+.
T Consensus 412 W~------------------------g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 412 WD------------------------GGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred Cc------------------------chHHHHHHHHHHHHHHHHHHHhh
Confidence 74 44666666666666666555544
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-37 Score=289.27 Aligned_cols=353 Identities=19% Similarity=0.265 Sum_probs=288.0
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
..+..++.+.++.|..+....+...++|++.+++|+|..+.|++.++|.++..+++|+...+.||+.||++++..+.++.
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi 89 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFI 89 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
++.+++++++||+.++++|++.|+..|.+++...++..+..|+++|++++++...+..++.++|.+++.++.+. .
T Consensus 90 ~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~-----~ 164 (394)
T COG2814 90 VSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQL-----F 164 (394)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHH-----h
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhc-cchh
Q 009914 163 GWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTG-SFPW 241 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 241 (522)
|||.+|++.++++++..+..+...+ |+...++. ....++..+.+|+|..+......++. ...|
T Consensus 165 GWR~~F~~ia~l~ll~~~~~~~~lP-~~~~~~~~---------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F 228 (394)
T COG2814 165 GWRATFLAIAVLALLALLLLWKLLP-PSEISGSL---------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGHF 228 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCCC---------------CcchhHHHHHhcCchHHHHHHHHHHHHcchh
Confidence 9999999999999999888877554 22211111 11112334567777777665544444 4467
Q ss_pred HHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009914 242 SALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 320 (522)
Q Consensus 242 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (522)
..++|+..+++ ..|++....+++...+++++++|+.+.|++.|| +.++ .+... ..+....... + ...
T Consensus 229 ~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~-----~l~~~-~~l~a~~~l~--l---~~~ 296 (394)
T COG2814 229 ALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRR-----ALIAA-LLLLALALLA--L---TFT 296 (394)
T ss_pred hhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchh-----HHHHH-HHHHHHHHHH--H---HHh
Confidence 88888877776 589999999999999999999999999999999 5552 22221 1122111111 1 112
Q ss_pred CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 321 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
.++.+......++.|+....... .......+.. ++.+..+.+++....++|..+|..++|.++|+ +|+
T Consensus 297 ~~~~~~~~~~~~~wg~a~~~~~~-~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-~g~ 364 (394)
T COG2814 297 GASPALALALLFLWGFAFSPALQ-GLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDA-LGY 364 (394)
T ss_pred cchHHHHHHHHHHHHHHhhhhhh-HHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hch
Confidence 34445455566667777665555 4555555533 47899999999999999999999999999999 786
No 3
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-40 Score=302.92 Aligned_cols=385 Identities=38% Similarity=0.588 Sum_probs=313.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHH
Q 009914 1 MKQETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFL 80 (522)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~ 80 (522)
++..++.+.++++.+.++..+.+.+....+.+++.+|++++..|++.+.+.+.+.+++|+.|+++||++||+++.+|..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 009914 81 WAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMG 160 (522)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~ 160 (522)
+.++.++.+++..+|++.++|.+.|+|.+.+.|.++++++|.+|+++|++.+++++.+..+|..+|.+.+..+....
T Consensus 108 W~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~--- 184 (493)
T KOG1330|consen 108 WTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT--- 184 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888773
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcc-----hhHHHHHHHhh
Q 009914 161 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKI-----PSFQIIVAQGV 235 (522)
Q Consensus 161 ~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 235 (522)
..||+.|+..+++++++.++..++.+||++...++.+.+.+..++. ...+++.+.+.++ +.+......+.
T Consensus 185 -~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~----ts~~kDl~~l~~~~v~v~~sl~~~a~~fv 259 (493)
T KOG1330|consen 185 -FWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPF----TSVWKDLKVLAKIKVFVLSSLGIIAAQFV 259 (493)
T ss_pred -cceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCc----cchHHHHHHHHccCceeeehHHHHHHHHh
Confidence 3499999999999999999999999888764332221211111111 2233334444443 34444444444
Q ss_pred hccchhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHH
Q 009914 236 TGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL 315 (522)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (522)
.+...|-...+.+...+-.|++..+..++..+...++.+|.+++|.++||+.++.++..+.........++......++.
T Consensus 260 ~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~ 339 (493)
T KOG1330|consen 260 IGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLF 339 (493)
T ss_pred ccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHH
Confidence 44444444444444444467777778888888999999999999999999888777666777777777777666666666
Q ss_pred hCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhH-HHHHHHHHhhCccc
Q 009914 316 VLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPP-VVGILAQHVYGFKP 393 (522)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~-~~g~l~~~~~g~~~ 393 (522)
..+..........+.++++|....+...+...-+..+++|++.|.+++++...+..+.+..+++ +.|.+.|+..||++
T Consensus 340 ~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~~ 418 (493)
T KOG1330|consen 340 LFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYKP 418 (493)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCCc
Confidence 6665555666677788888888887777677788899999999999999999998877766555 99999999999875
No 4
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=4.6e-36 Score=293.42 Aligned_cols=351 Identities=17% Similarity=0.201 Sum_probs=270.7
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
++|..++.+.++.+..........+++|.+.+++|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 34545666666666655555556677899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
++++++++++|++.+++.|+++|++.+...+...+++.|++|+++|++++++...+.++|.+++|++++.+.+. .
T Consensus 86 ~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~-----~ 160 (390)
T PRK03545 86 ASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY-----L 160 (390)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH-----h
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887 8
Q ss_pred CchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhh-hccchh
Q 009914 163 GWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGV-TGSFPW 241 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 241 (522)
|||++|++.++++++..+..+...++++.+ ++ +..++.++.++++.++......+ .....+
T Consensus 161 gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (390)
T PRK03545 161 GWRTTFLAIGGGALITLLLLIKLLPLLPSE--HS----------------GSLKSLPLLFRRPALVSLYLLTVVVVTAHF 222 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--Cc----------------chHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 999999999988877766655543332111 00 00123345667777655433332 222334
Q ss_pred HHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009914 242 SALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 320 (522)
Q Consensus 242 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (522)
...++.+.++++ .|++..+.+.+.....++.++++++.+++.||+++|. . .... ..... ....+...
T Consensus 223 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-----~-~~~~-~~~~~--~~~~l~~~--- 290 (390)
T PRK03545 223 TAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF-----L-LIAI-ALLLV--CLLLLLPA--- 290 (390)
T ss_pred HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH-----H-HHHH-HHHHH--HHHHHHHH---
Confidence 455677777764 7999999999999999999999999999999998762 2 2111 11111 11111111
Q ss_pred CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 321 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
.++.+......++.|++.+...+ .....+.+..| +.+++++|+.+...++|..+||.+.|++.|. .|+
T Consensus 291 ~~~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~-~g~ 358 (390)
T PRK03545 291 ANSEWHLSVLSIFWGIAIMCIGL-AMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH-LGL 358 (390)
T ss_pred hchHHHHHHHHHHHHHHHhcchH-HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCh
Confidence 12334455667777887766656 56677778776 6889999999999999999999999999998 676
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=3.5e-36 Score=300.65 Aligned_cols=369 Identities=18% Similarity=0.171 Sum_probs=270.6
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
.+..+.++++++++.++++..+++..|.+.+++|++.++.|++.+++.+++.+++++.|+++||+|||+++.++.+++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 34567788888888999999999999999999999999999999999999999999999999999999999988888877
Q ss_pred HHHHHHh-----hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009914 84 ATFLVAF-----SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTF 158 (522)
Q Consensus 84 ~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~ 158 (522)
..+++++ +++++.+++.|+++|++.+...|...+++.+|+|+++|++++++...+.++|.++++++..++.....
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~ 186 (467)
T PRK09556 107 CMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF 186 (467)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc
Confidence 7776665 58999999999999999999999999999999999999999999999999999999998877655310
Q ss_pred cCCCCchHHHHHHHHHHHHHHHhhhhccC-CCCCCCCCCCCC---cc---cccchhhhhhHHHHHH-hhhhhcchhHHHH
Q 009914 159 MGIPGWRISFHIVGLISVVVGTLVRLFAN-DPHFPDGGTANS---DQ---VSSKSFRSDVKVLIQE-AKSVIKIPSFQII 230 (522)
Q Consensus 159 ~~~~gw~~~f~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 230 (522)
..+||..|.+.+++.++..++.+++.+ +|+.....+.++ +. +++....++.. ..+. .+..++++.++..
T Consensus 187 --~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~ 263 (467)
T PRK09556 187 --DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMT-KWQIFVEYVLKNPVIWLL 263 (467)
T ss_pred --cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCc-HHHHHHHHHHcChHHHHH
Confidence 026999999988888777766665543 333211111000 00 00000000000 0111 2236788888877
Q ss_pred HHHhhhccc-hhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHH
Q 009914 231 VAQGVTGSF-PWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 308 (522)
Q Consensus 231 ~~~~~~~~~-~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (522)
.+..++... .++...|.|.|++ ++|++..+++.......++.+++.++.|+++||+++|+ .......... ..
T Consensus 264 ~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~-----~~~~~~~~~~-~~ 337 (467)
T PRK09556 264 CFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR-----ALVACIALAL-II 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-----hHHHHHHHHH-HH
Confidence 665554444 3456678999996 58999999999999999999999999999999999884 2222111111 11
Q ss_pred HHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHH-HhchhhHHHHHHHH
Q 009914 309 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESI-LSSFAPPVVGILAQ 386 (522)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~~g~l~~ 386 (522)
...... .. ..+.+...+..++.|++...... .......|.+|++.+|++.|+.+...++ +.+++|.+.|++.|
T Consensus 338 -~~~~~~--~~-~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 338 -FTLGVY--QH-ATSEYMYLASLFALGFLVFGPQL-LIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred -HHHHHH--Hh-cCcHHHHHHHHHHHHHHHhhHHH-HHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 111111 11 12233344455556654322222 2235677999999999999999999997 66999999999999
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=2.2e-35 Score=289.57 Aligned_cols=378 Identities=16% Similarity=0.127 Sum_probs=274.9
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHH
Q 009914 2 KQETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLW 81 (522)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~ 81 (522)
|.+|+.+..+++.+++++++....+...|.+.+++|++.+++|++.+++.+++.+++++.|++.||+|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 34688899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc-ccC
Q 009914 82 AAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT-FMG 160 (522)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~-~~~ 160 (522)
+++.+++++++|++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+.++|.++++++++++.... ..+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999886421 011
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhccCC-CCCCCCCCCCCcc--------------cccchhhhhhHHHHHHhhhhhcch
Q 009914 161 IPGWRISFHIVGLISVVVGTLVRLFAND-PHFPDGGTANSDQ--------------VSSKSFRSDVKVLIQEAKSVIKIP 225 (522)
Q Consensus 161 ~~gw~~~f~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 225 (522)
..|||+.|++.+++.++..++.+++.+| |+..+.-.+++++ ..+.....+.......++.++ ++
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 242 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TP 242 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-Ch
Confidence 2699999999988887776666554444 4321100000000 000000000000011233333 45
Q ss_pred hHHHHHHHhhhccc-hhHHHHHHHHHHHHh--CCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHH
Q 009914 226 SFQIIVAQGVTGSF-PWSALSFAAMWLELT--GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQIS 302 (522)
Q Consensus 226 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 302 (522)
.++......++... .+...+|+|.+++++ |++..+++.+.....++.+++.++.|+++||+++|+ .......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~-----~~~~~~~ 317 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK-----HHTALPY 317 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH-----HHHHHHH
Confidence 55555444433333 456678999999874 678888999999999999999999999999998763 2111111
Q ss_pred HHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHH
Q 009914 303 SLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVG 382 (522)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g 382 (522)
....+ . ..+... . ..... ....+.+.+++.....+ .......+.+|++.|++++|+.+...+++++++|.+.|
T Consensus 318 ~~~~~--~-~~~~~~-~-~~~~~-~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g 390 (412)
T TIGR02332 318 LFAAA--G-WLLASA-T-DHNLI-QLLGIIMASMGSFSAMA-IFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIG 390 (412)
T ss_pred HHHHH--H-HHHHHh-c-CCHHH-HHHHHHHHHHHhhhhhh-HHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence 11111 1 111111 1 12111 22222223333322223 33455567789999999999999999999999999999
Q ss_pred HHHHHhhCcc
Q 009914 383 ILAQHVYGFK 392 (522)
Q Consensus 383 ~l~~~~~g~~ 392 (522)
.+.|...+|.
T Consensus 391 ~i~~~~g~~~ 400 (412)
T TIGR02332 391 ILKDATGSFN 400 (412)
T ss_pred cccccCCCCc
Confidence 9999844564
No 7
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4.4e-35 Score=294.12 Aligned_cols=369 Identities=14% Similarity=0.193 Sum_probs=254.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhh----hHH--HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTG----LGS--LTLFRSIVQASCYPIAAYLAIRHNRAHVIALGA 78 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~g~--~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~ 78 (522)
++.+....++.++++++..+++...|.+.++++.+..+ ++. +.++..+++.++++++|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 45677788999999999999999999999998644322 222 257788999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHH--------HHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 009914 79 FLWAAATFLVAFSSTFAQ--------VAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFS 150 (522)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~ 150 (522)
++++++++++++++|++. ++++|+++|++.|..++...+++.|++|+++|+++.++...+..+|.++|+.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999874 789999999999999999999999999999999999999998888988888776
Q ss_pred Hhhhccc---ccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCc-ccc--cchhhhhhHHHHHHhhhhhcc
Q 009914 151 VVMAPMT---FMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSD-QVS--SKSFRSDVKVLIQEAKSVIKI 224 (522)
Q Consensus 151 ~~l~~~~---~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~ 224 (522)
..+.... ....+|||++|++.+++.++..++....+|+|++...+++.++ .++ .+....+.++.++.. .
T Consensus 175 ~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 249 (490)
T PRK10642 175 VLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKH-----W 249 (490)
T ss_pred HHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHh-----H
Confidence 5543210 0112799999999876666544444445555543211110000 000 000000112221110 0
Q ss_pred hhHHHHH-HHhhhccchhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHH
Q 009914 225 PSFQIIV-AQGVTGSFPWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQIS 302 (522)
Q Consensus 225 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 302 (522)
+.+.... ...+.....+....|+|.|++ .+|++..+.+.......++.+++.++.|+++||+|||+ .+.....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-----~~~~~~~ 324 (490)
T PRK10642 250 RSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRP-----FVILGSV 324 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-----HHHHHHH
Confidence 1111111 222222334566778999996 57999888888888888889999999999999999984 2222211
Q ss_pred HHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHH
Q 009914 303 SLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVG 382 (522)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g 382 (522)
...... ...+.... ..+...+....++.+++.+.... ....+..+.+|++.|+++.|+.+.+..+++.++|.+.|
T Consensus 325 ~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~g-~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g 399 (490)
T PRK10642 325 ALFVLA--IPAFILIN--SNVIGLIFAGLLMLAVILNCFTG-VMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAA 399 (490)
T ss_pred HHHHHH--HHHHHHHh--CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 11111111 12223334445555555544444 56677889999999999999877777888899999999
Q ss_pred HHHHHh
Q 009914 383 ILAQHV 388 (522)
Q Consensus 383 ~l~~~~ 388 (522)
++.+..
T Consensus 400 ~l~~~~ 405 (490)
T PRK10642 400 WLVEST 405 (490)
T ss_pred HHHHHh
Confidence 998863
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=4.8e-35 Score=289.62 Aligned_cols=372 Identities=16% Similarity=0.152 Sum_probs=271.5
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
++..+....++++...++...++..+|.+.+++|.|+.+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 34566667788888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC
Q 009914 84 ATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG 163 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g 163 (522)
+.++++++++++.+++.|++.|++.+...+...+++.+++|+++|++++++.+.+.++|.++++.+++++.+. .|
T Consensus 101 ~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~g 175 (434)
T PRK11663 101 INILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH-----YG 175 (434)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999887 89
Q ss_pred chHHHHHHHHHHHHHHHhhhh-ccCCCCCCCCCC--C--CCcc---cccchhhhhhHHHHHHhhhhhcchhHHHHHHHhh
Q 009914 164 WRISFHIVGLISVVVGTLVRL-FANDPHFPDGGT--A--NSDQ---VSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGV 235 (522)
Q Consensus 164 w~~~f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~--~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (522)
||+.|++.+++.++..++..+ ++++|+...... + .+.. ++.+....+.++..+ +..++++.++.+....+
T Consensus 176 w~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 253 (434)
T PRK11663 176 WRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILT--KYVLLNPYIWLLSFSYV 253 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHH--HHHhcChHHHHHHHHHH
Confidence 999999988877666554444 444433211000 0 0000 000000001111111 12566777776655444
Q ss_pred hccc-hhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHH
Q 009914 236 TGSF-PWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 313 (522)
Q Consensus 236 ~~~~-~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (522)
.... .....+|+|.|++ ++|++..+++...+...+++++++++.|++.||+.++++ +............ ....
T Consensus 254 ~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r---~~~~~~~~~~~~~--~~~~ 328 (434)
T PRK11663 254 LVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNR---GPMNLIFAAGILL--SVGS 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCc---cHHHHHHHHHHHH--HHHH
Confidence 4333 3455678999995 589999999999999999999999999999999843321 1111111111111 1111
Q ss_pred HHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 314 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
+...+. .+ ........+.+|++...... .......|..|++.++++.|+.++..++|++++|.+.|++.|. .||
T Consensus 329 ~~~~~~-~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~-~g~ 402 (434)
T PRK11663 329 LWLMPF-AS-YVMQAACFFTIGFFVFGPQM-LIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI-WHW 402 (434)
T ss_pred HHHccc-cc-HHHHHHHHHHHHHHHhhHHH-HHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh-ccc
Confidence 112222 12 22222333444443322222 2345668889999999999999999999999999999999998 666
No 9
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=5.7e-35 Score=287.79 Aligned_cols=358 Identities=18% Similarity=0.193 Sum_probs=273.4
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
++|..+...++..+.++++....+...|.+.+++|.|+.+.|++.+.+.++..++.++.|+++||+|||+++..+.++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 91 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFG 91 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 45677888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+. .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~ 166 (406)
T PRK11551 92 LFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD-----A 166 (406)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-----c
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888776 8
Q ss_pred CchHHHHHHHHHHHHHHHhhhh-ccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHH-HHHhhhccch
Q 009914 163 GWRISFHIVGLISVVVGTLVRL-FANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQII-VAQGVTGSFP 240 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 240 (522)
+||+.|++.+++.++..++... +++.|+...++.+ .+.++... +...+. .+.+..+.+ ....+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~ 236 (406)
T PRK11551 167 AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA---GKQRAPVL---RALFGE----GRATATLLLWISYFFTLIVL 236 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc---chhhhhhH---HHHhhh----hhhhHHHHHHHHHHHHHHHH
Confidence 9999999988776666555544 3443332211110 00000000 111111 011111122 1111222223
Q ss_pred hHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009914 241 WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 320 (522)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (522)
+....|.|.++++.|++..+.+.+.+...++.++++++.|++.||+++|+ .+.... ..... ....+. . .
T Consensus 237 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----~~~~~~-~~~~~--~~~~~~-~--~ 305 (406)
T PRK11551 237 YFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRR-----VVLLIY-AGILA--SLAALA-A--A 305 (406)
T ss_pred HHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHH-HHHHH--HHHHHH-h--c
Confidence 45567889999889999999999999999999999999999999999873 322211 11111 111111 1 1
Q ss_pred CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHh
Q 009914 321 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 388 (522)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~ 388 (522)
+ ..+...+..++.|++.+...+ ...++..|.+|+++|+++.|+.+....++..++|.+.|.+.+..
T Consensus 306 ~-~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 371 (406)
T PRK11551 306 P-SFAGMLLAGFAAGLFVVGGQS-VLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG 371 (406)
T ss_pred C-cHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC
Confidence 2 223344555667776665566 67889999999999999999999999999999999999999873
No 10
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=3.7e-34 Score=287.55 Aligned_cols=373 Identities=19% Similarity=0.165 Sum_probs=287.3
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHH
Q 009914 1 MKQETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFL 80 (522)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~ 80 (522)
|.++|..+..++++.++..++..+.+..+|.+.+++|.+.++.+|+.+.+.++..++.+++|+++||+|||++++.+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~ 80 (495)
T PRK14995 1 MFRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTL 80 (495)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 56788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhcc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009914 81 WAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADST-DDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFM 159 (522)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~ 159 (522)
.+++.+++++++|++.++++|+++|++.+...+.....+.+++ |+++|++++++......+|..+||.+++++.+.
T Consensus 81 ~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~--- 157 (495)
T PRK14995 81 FGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH--- 157 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---
Confidence 9999999999999999999999999999999998888887776 678999999999999999999999999999988
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcc----------------cccchhhhhh------------
Q 009914 160 GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQ----------------VSSKSFRSDV------------ 211 (522)
Q Consensus 160 ~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~------------ 211 (522)
.+||+.|++...+.++..++..+..++++..+.++.+... ......+...
T Consensus 158 --~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (495)
T PRK14995 158 --FYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALL 235 (495)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Confidence 8999999998887777766665544332211111100000 0000000000
Q ss_pred --HHHHHHh--------hhhhcchhHHHHHHHhhhccc-hhHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHhccchhh
Q 009914 212 --KVLIQEA--------KSVIKIPSFQIIVAQGVTGSF-PWSALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFG 279 (522)
Q Consensus 212 --~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 279 (522)
.....+. .+++++|.+.......+.... .++...+.|.|++. +|+++.++|.......++..++.++.
T Consensus 236 l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~ 315 (495)
T PRK14995 236 LGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIA 315 (495)
T ss_pred HHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000111 245677777665554444443 34555678999874 89999999999999999999999999
Q ss_pred hhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchh
Q 009914 280 GRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSR 359 (522)
Q Consensus 280 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 359 (522)
|++.||+++|+ .+... ..+..+. ...+.......+ .+......++.|++.+...+ .....+.+.+|++++
T Consensus 316 g~l~~r~g~~~-----~~~~g-~~~~~~~--~~~l~~~~~~~~-~~~~~~~~~l~G~g~g~~~~-~~~~~~~~~~~~~~~ 385 (495)
T PRK14995 316 GILVSRLGLRL-----VATGG-MALSALS--FYGLAMTDFSTQ-QWQAWGLMALLGFSAASALL-ASTSAIMAAAPPEKA 385 (495)
T ss_pred HHHHHHcCchH-----HHHHH-HHHHHHH--HHHHHHhcCCCc-hHHHHHHHHHHHHhHHHHHH-HHHHHHHhcCCHHhc
Confidence 99999999873 22221 1111111 111111122222 23345567788888888777 677888889999999
Q ss_pred HHHHHHHHHHHHHHhchhhHHHHHHHHHh
Q 009914 360 TSVYAMDRSFESILSSFAPPVVGILAQHV 388 (522)
Q Consensus 360 ~~~~g~~~~~~~~~~~i~~~~~g~l~~~~ 388 (522)
+.+.++.++..++|+.+|+.+.|.+.+..
T Consensus 386 g~~~~~~~~~~~lG~~~G~ai~g~i~~~~ 414 (495)
T PRK14995 386 AAAGAIETMAYELGAGLGIAIFGLLLSRS 414 (495)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998863
No 11
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.7e-34 Score=286.30 Aligned_cols=367 Identities=16% Similarity=0.142 Sum_probs=267.1
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
.+++.+..+.++++..+++.....+..|.+.+++|+|+.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34567788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
++.++++++++++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+. .
T Consensus 95 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~-----~ 169 (426)
T PRK12307 95 VGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA-----Y 169 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc-----C
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888877 8
Q ss_pred CchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc---
Q 009914 163 GWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF--- 239 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 239 (522)
+||+.|++..+..++...+....+++++..+++.+ ++.++....+ +......+..++++.++...........
T Consensus 170 ~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (426)
T PRK12307 170 GWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLS-GKGKHSQSAW---SVFSLSMKGLFNRAQFPLTLCVFIVLFSIFG 245 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhh-ccccccccch---hhhhHHHHHHHhhchHHHHHHHHHHHHHHHH
Confidence 99999998654433322222122222211111100 0000011111 1111234556666665543322221111
Q ss_pred -hhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCC
Q 009914 240 -PWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP 318 (522)
Q Consensus 240 -~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (522)
.+....++|.|+++.|+++.+.+.+.+...++.++++++.+++.||+++|+ ....... .... ....+....
T Consensus 246 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-----~~~~~~~-~~~~--~~~~~~~~~ 317 (426)
T PRK12307 246 ANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK-----TFSIGLL-MSFL--FIFPLFRIP 317 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-----HHHHHHH-HHHH--HHHHHHHHc
Confidence 223456789999888999999999999999999999999999999999873 3222211 1111 111111111
Q ss_pred CCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 319 DDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
...........+..+++.....+ ....++.|.+|++.|++++|+.+.+..+++.++|.+.|++.+. .|
T Consensus 318 --~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~-~g 385 (426)
T PRK12307 318 --QDNYLLLGACLFGLMATNVGVGG-LVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT-MG 385 (426)
T ss_pred --cccHHHHHHHHHHHHHhcccHhH-HHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc-cc
Confidence 11112121222222222222223 4567789999999999999999999999999999999999988 45
No 12
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=3.4e-34 Score=279.78 Aligned_cols=358 Identities=14% Similarity=0.119 Sum_probs=268.9
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
+|+.+....+..+..+ ....+++..|.+.+++|+|.++.|++.+++.+++.+++++.|+++||+|||+++..+.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 2 WWYVLVGTVIMCFTSG-YVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL 80 (377)
T ss_pred eEEEeHHHHHHHHHhh-HHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH
Confidence 3444444444444444 356788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC
Q 009914 84 ATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG 163 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g 163 (522)
+.++++++++++.+++.|++.|++.+...+.....+.+++| ++|++++++...+.++|.++++++.+.+.+. .+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~ 154 (377)
T TIGR00890 81 GFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINL-----EG 154 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhc-----cc
Confidence 99999999999999999999999999988888889999986 5799999999999999998877777776665 79
Q ss_pred chHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccch-hH
Q 009914 164 WRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFP-WS 242 (522)
Q Consensus 164 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 242 (522)
||+.|++.+++.++..+..+++.++|+.++.+++ ++.+ +..+..++.++++.++......+..... ..
T Consensus 155 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (377)
T TIGR00890 155 VPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTN-IEVS----------VKDYTVWEMLRTPQFWVLYLSFFLNAVSGLL 223 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheecCchhccccC-cccc----------hhhhhHHHHHcCccHHHHHHHHHHHhHHHHH
Confidence 9999999999888887777666555433221111 0000 0011234456777766655444433332 23
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 009914 243 ALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS 322 (522)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (522)
...+.+.|.+++|.+..+.+.+.+...++.++++++.|++.||+++|+ .+.... ..... ........ .. .
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----~~~~~~-~~~~~--~~~~~~~~-~~-~ 293 (377)
T TIGR00890 224 LIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK-----TMSIVF-GISAV--GMAAMLFI-PM-L 293 (377)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----hhhHHH-HHHHH--HHHHHHHc-cc-c
Confidence 345567777888999988999999999999999999999999999884 222211 11111 11111111 11 1
Q ss_pred hhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 323 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 323 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
.........++.+++.+...+ ....++.|.+|+++|+++.|+.+....++..++|.+.|.+.+. .||
T Consensus 294 ~~~~~~~~~~~~g~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~ 360 (377)
T TIGR00890 294 NDVLFLATVALVFFTWGGTIS-LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE-IGF 360 (377)
T ss_pred hhHHHHHHHHHHHHHhccchh-ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh-hch
Confidence 222233445566777776666 6778899999999999999999999999999999999999988 565
No 13
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.1e-33 Score=271.47 Aligned_cols=336 Identities=13% Similarity=0.018 Sum_probs=244.5
Q ss_pred HHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 009914 18 ERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQV 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l 97 (522)
+......+++.+|.+.+++|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+.....++++.+
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 44556778999999999999999999999999999999999999999999999988766655554544333334799999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHH
Q 009914 98 AISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVV 177 (522)
Q Consensus 98 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i 177 (522)
++.|+++|++.+. .+.....++|++|+++|++++++.+.+..+|.+++++++.++.+. .|||+.|++.++++++
T Consensus 83 ~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-----~gWr~~f~~~~~l~~~ 156 (368)
T TIGR00903 83 LACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA-----GGLQLLIIPIAAVAAA 156 (368)
T ss_pred HHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cchHHHHHHHHHHHHH
Confidence 9999999999986 456666779999999999999999999999999999999999887 8999999998888877
Q ss_pred HHHhhhhc-cCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHHHHHHHHHhC
Q 009914 178 VGTLVRLF-ANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSFAAMWLELTG 255 (522)
Q Consensus 178 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 255 (522)
..++.++. |++|++..+ . . +. ++..+++++++++|.++.+....++... .++..+|+|.|+++.|
T Consensus 157 ~~~~~~~~lp~~p~~~~~-~--~---~~-------~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g 223 (368)
T TIGR00903 157 GIILVLAALPALPFQAAE-G--F---GF-------KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAG 223 (368)
T ss_pred HHHHHHHHcCCCCCCCCC-C--c---ch-------HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 77666654 443432211 0 0 00 1112345678888888877665555544 5677889999998888
Q ss_pred CChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHH
Q 009914 256 FSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTG 335 (522)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 335 (522)
++.. .+....+..+.+.++ .++++||..|++.. +............ ... ..... .+ ......+..+.+
T Consensus 224 ~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r--~~~~~~~~~~~a~--~~~-~~~~~--~~-~~~~~~~~~l~~ 291 (368)
T TIGR00903 224 LEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLR--SIYIRAAALLIAA--FFL-ALAFE--LN-RLALFAFIGIAG 291 (368)
T ss_pred CChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhH--HHHHHHHHHHHHH--HHH-HHHHc--cc-cHHHHHHHHHHH
Confidence 8865 566666666655554 47788887654211 1111111111111 111 11111 11 222334445556
Q ss_pred HHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHH
Q 009914 336 LFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 385 (522)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~ 385 (522)
++.....+ ..+++.+|.+|++.|+++.|+.+..+++++.++|++.+.+.
T Consensus 292 ~~~~~~~~-~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 292 LLMLPAYA-IIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HhhhhhHH-HHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 65555555 57789999999999999999999999999999999988877
No 14
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.5e-33 Score=273.33 Aligned_cols=351 Identities=14% Similarity=0.131 Sum_probs=267.0
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
+.|+.+..+.++.+............+|.+.+++|.++++.|+..+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~ 96 (394)
T PRK10213 17 PNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLT 96 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 34555556666655555555566677899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|++++++...+.++|.++||++++.+.+. .
T Consensus 97 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~-----~ 171 (394)
T PRK10213 97 LSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL-----I 171 (394)
T ss_pred HHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----c
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987 8
Q ss_pred CchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hh
Q 009914 163 GWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PW 241 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 241 (522)
|||+.|++.+++.++..+......++++. +++ + . . +..++.+++|.++......+.... .+
T Consensus 172 gw~~~f~~~~~l~~~~~l~~~~~~p~~~~--~~~-----~-~-------~---~~~~~~l~~~~~~~~~~~~~~~~~~~~ 233 (394)
T PRK10213 172 GWRNVFNAAAVMGVLCIFWIIKSLPSLPG--EPS-----H-Q-------K---QNTFRLLQRPGVMAGMIAIFMSFAGQF 233 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCc--ccc-----c-c-------h---hHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 99999999887776655544432222111 000 0 0 0 112345677777665443333222 33
Q ss_pred HHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009914 242 SALSFA-AMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 320 (522)
Q Consensus 242 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (522)
...++. |.|.+++|+++.+.+......+++.+++.++.+++.||.+++ ............ . ..+...
T Consensus 234 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~------~l~~~~~~~~~~--~-~~l~~~--- 301 (394)
T PRK10213 234 AFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL------ALAGAPLVLAVS--A-LVLTLW--- 301 (394)
T ss_pred HHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh------HHHHHHHHHHHH--H-HHHHHH---
Confidence 444564 677778899999999999999999999999999999985433 222211111111 1 111111
Q ss_pred CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 321 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
.+..+......++.|++.+...+ ...+.+++..| +++++..+......+++..+||.++|++.|. .|+
T Consensus 302 ~~~~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~-~g~ 369 (394)
T PRK10213 302 GSDKIVATGVAIIWGLTFALVPV-GWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN-IGL 369 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCh
Confidence 12233455667778888887777 77778888887 5577888888888899999999999999997 564
No 15
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=4.2e-34 Score=281.94 Aligned_cols=371 Identities=17% Similarity=0.186 Sum_probs=272.4
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
++|+.+..++++++...++....++..|.+.+++|.|+.+.|++.+++.++..+++++.|.++||+|||+++..+.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~ 88 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFS 88 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 56788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+. .
T Consensus 89 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~-----~ 163 (405)
T TIGR00891 89 AGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV-----W 163 (405)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----c
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998775 4
Q ss_pred C--chHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCccccc--------chhhhhhHHHHHHhhhhh-cch-hHHHH
Q 009914 163 G--WRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSS--------KSFRSDVKVLIQEAKSVI-KIP-SFQII 230 (522)
Q Consensus 163 g--w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~-~~~~~ 230 (522)
+ ||+.|++.++..++..+.....+++++..+.+++.+...+. ...+...++.....+... +++ .+...
T Consensus 164 ~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
T TIGR00891 164 GDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYL 243 (405)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHH
Confidence 4 99999987766555544444454433222111110000000 000000000001111111 111 11111
Q ss_pred H-HHhhhccchhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHH
Q 009914 231 V-AQGVTGSFPWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 308 (522)
Q Consensus 231 ~-~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (522)
. ...+..........+.|.|++ ++|++..+.+.+.+...++.++++++.+++.||+++|+ .+..... ....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~-----~~~~~~~-~~~~- 316 (405)
T TIGR00891 244 VVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRK-----AYVCSLL-AGQL- 316 (405)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh-----hhHHHHH-HHHH-
Confidence 1 111122222344567888885 58999999999999999999999999999999999884 2222211 1111
Q ss_pred HHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHh
Q 009914 309 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 388 (522)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~ 388 (522)
........ ....+...+..++.++......+ ....++.|.+|++.|++++|+.+.+.++++.++|++.|.+.|.
T Consensus 317 -~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~- 390 (405)
T TIGR00891 317 -LIIPVFAI---GANVAVLGLGLFFQQMLVQGIWG-ILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR- 390 (405)
T ss_pred -HHHHHHHh---CCchHHHHHHHHHHHHHHccchh-hHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 11111111 12223334444555665555555 6778899999999999999999999999999999999999998
Q ss_pred hC-c
Q 009914 389 YG-F 391 (522)
Q Consensus 389 ~g-~ 391 (522)
.| |
T Consensus 391 ~g~~ 394 (405)
T TIGR00891 391 LDEY 394 (405)
T ss_pred cccc
Confidence 45 5
No 16
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=6e-34 Score=282.68 Aligned_cols=373 Identities=16% Similarity=0.120 Sum_probs=271.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
+|.++..+.+...........++...|.+.+++|.+.++.+++.+.+.++..++.+++|+++||+|||++++.+.++.++
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 96 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASL 96 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHH
Confidence 46666666666665555556678889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHH-HHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 84 ATFLVAFSSTFAQVAI-SRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
+.++++++++++.+++ .|++.|++.+...+...+++.++++ ++|++++++.+.+..+|..++|++++.+.+. .
T Consensus 97 ~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~-----~ 170 (455)
T TIGR00892 97 GMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES-----F 170 (455)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH-----h
Confidence 9999999999988865 5799999998877777888899995 7899999999999999999999999999887 8
Q ss_pred CchHHHHHHHHHHHHHHHhhhhccCCCCCC---CCCCCCC-cccccc-h--hhhhhHHHHHH-hhhhhcchhHHHHHHHh
Q 009914 163 GWRISFHIVGLISVVVGTLVRLFANDPHFP---DGGTANS-DQVSSK-S--FRSDVKVLIQE-AKSVIKIPSFQIIVAQG 234 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~-~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (522)
|||++|++.+++.++..+..++..+.++.. +.+.++. +..... + .....++..+. ..+.+++|.++..+...
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGN 250 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHH
Confidence 999999999988776665544443322111 0000000 000000 0 00000111110 01356778777665544
Q ss_pred hhccc-hhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHH
Q 009914 235 VTGSF-PWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 313 (522)
Q Consensus 235 ~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (522)
+.... .+....++|.|+++.|++..+++.+.++.+++.++++++.+++.||...++. +.........+.. +..+
T Consensus 251 ~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~---~~~~~~~~~~~~~-l~~l- 325 (455)
T TIGR00892 251 VIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH---VQYLFSFALLFNG-LTHL- 325 (455)
T ss_pred HHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH---HHHHHHHHHHHHH-HHHH-
Confidence 43333 3455578899998899999999999999999999999999999997422110 1111111111111 1111
Q ss_pred HHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 314 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
+.. . .++.+.+.+..++.|++.+...+ ...+++.|.+|++++++.+|+.+...+++.+++|.++|.+.+...+|
T Consensus 326 l~~--~-~~~~~~~~i~~~~~G~~~g~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~ 399 (455)
T TIGR00892 326 LCA--L-AGDYTGLVIYCIFFGLSFGSVGA-LLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNY 399 (455)
T ss_pred HHH--H-hchHHHHHHHHHHHHHHhchHHH-HHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCc
Confidence 111 1 12334455677788888877777 77889999999999999999999999999999999999999984455
No 17
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.4e-33 Score=275.48 Aligned_cols=332 Identities=14% Similarity=0.124 Sum_probs=249.0
Q ss_pred hhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 009914 23 SLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRA 102 (522)
Q Consensus 23 ~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 102 (522)
...++.+|.+.+++|+|.++.|++.+++.+++.+++++.|+++||+|||+++..+..+++++.++++++++++.+++.|+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhh
Q 009914 103 LNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLV 182 (522)
Q Consensus 103 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~ 182 (522)
++|++.+...+...+++.+++| ++|++++++...+..+|..+|+.+++++.++. .+||..+.+.++..++..+..
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~----~~w~~~~~~~~~~~~~~~~~~ 180 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS----ETWYQTLAWWALPAVVALFAW 180 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997 77999999999999999999999999888751 389999887766655443333
Q ss_pred hhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhcc-chhHHHHHHHHHHHHhCCChhHH
Q 009914 183 RLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGS-FPWSALSFAAMWLELTGFSHEKT 261 (522)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~ 261 (522)
+...++.+..++ + ++ . ..++.++++..+.......... ..+...+|.|.|++++|.+..++
T Consensus 181 ~~~~~~~~~~~~-~----~~-~------------~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~a 242 (393)
T PRK09705 181 WWQSAREVASSH-K----TT-T------------TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYS 242 (393)
T ss_pred HHHhcCCCcccc-C----CC-c------------CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhh
Confidence 322222111000 0 00 0 0112234454444433333233 34466678999998899999999
Q ss_pred HHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhcc
Q 009914 262 AFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWN 341 (522)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 341 (522)
+...++..++.++++++.+++.||+++|+ ...... .+... ....+...+. .... . ..++.|++.+..
T Consensus 243 g~~~~~~~i~~i~g~~~~g~l~~r~~~~~-----~~~~~~-~l~~~--~~~~~~~~~~--~~~~-~--~~~l~g~g~g~~ 309 (393)
T PRK09705 243 GSLLALMTLGQAAGALLMPAMARHQDRRK-----LLMLAL-VLQLV--GFCGFIWLPL--QLPV-L--WAMVCGLGLGGA 309 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccchH-----HHHHHH-HHHHH--HHHHHHHccc--hHHH-H--HHHHHHHhccch
Confidence 99999999999999999999999998873 322221 11111 1111111121 1111 1 233456666666
Q ss_pred CCCcchhhhhhhcC-cchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 342 APATNNPIFAEIVP-EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 342 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
.+ .......+..+ ++.+++..|+.+.+.++++.++|.+.|++.|...+|
T Consensus 310 ~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~ 359 (393)
T PRK09705 310 FP-LCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNY 359 (393)
T ss_pred HH-HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 66 45555566664 678999999999999999999999999999994334
No 18
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=3.2e-34 Score=282.05 Aligned_cols=364 Identities=18% Similarity=0.190 Sum_probs=271.9
Q ss_pred HHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhH
Q 009914 15 GIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTF 94 (522)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~ 94 (522)
+++..++...++...|.+.+++|.|+.+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 45667777889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHH
Q 009914 95 AQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLI 174 (522)
Q Consensus 95 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~ 174 (522)
+.+++.|++.|++.+...+...+++.|++|+++|++.+++.+....+|.++++.+++.+.+. .+||+.|++.+++
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~~~~~~~~ 157 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH-----FSWQWAFIIEGVL 157 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh-----CCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998877 8999999999888
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCccc-ccch------hhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHH
Q 009914 175 SVVVGTLVRLFANDPHFPDGGTANSDQV-SSKS------FRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSF 246 (522)
Q Consensus 175 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 246 (522)
.++..++.++..++++..+...++++++ ..+. ..++.+......++.+++|.++......+.... ......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (399)
T TIGR00893 158 GIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTW 237 (399)
T ss_pred HHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHH
Confidence 8777776665544432221111000000 0000 000001111234456677777766555554444 3455678
Q ss_pred HHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhH
Q 009914 247 AAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 325 (522)
Q Consensus 247 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (522)
.|.|++ .+|.+..+.+.+.+...++.+++.++.+++.||+++|+.. ........................ ....+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 313 (399)
T TIGR00893 238 FPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKS---LVFARKTAIIAGLVLSLLMFATNY-VNIPY 313 (399)
T ss_pred HHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---hhHHHHHHHHHHHHHHHHHHHhcc-chhHH
Confidence 898886 5899999999999999999999999999999999998521 111111111111111111111111 12222
Q ss_pred HHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 326 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 326 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
.......+.+++.+ ..+ ...++..|..|++.|+++.|+.+.+.+++..++|.+.|.+.|. .|
T Consensus 314 ~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~-~g 375 (399)
T TIGR00893 314 AALALVALGFFGLG-AGA-IGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT-TG 375 (399)
T ss_pred HHHHHHHHHHhchh-hhh-HHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC-CC
Confidence 22222333333333 455 7889999999999999999999999999999999999999998 44
No 19
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=7.2e-34 Score=289.89 Aligned_cols=371 Identities=14% Similarity=0.126 Sum_probs=270.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
+|..+++++++.+..+++...++.++|.+.+++|++..+.+++.+++.++.+++++++|+++||+|||++++++.++.++
T Consensus 165 ~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i 244 (742)
T TIGR01299 165 QWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGF 244 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 46677778888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccc-----
Q 009914 84 ATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTF----- 158 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~----- 158 (522)
+.++++++++++.++++|++.|++.+...+...+++.|++|+++|++.+++..++..+|.++++.++..+.....
T Consensus 245 ~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~ 324 (742)
T TIGR01299 245 FAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQM 324 (742)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999988877654210
Q ss_pred ---cCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCc--------------cc--ccch-------------
Q 009914 159 ---MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSD--------------QV--SSKS------------- 206 (522)
Q Consensus 159 ---~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--------------~~--~~~~------------- 206 (522)
....+||+.+++.++..++..++.+++|++|++...+.+.++ .. +...
T Consensus 325 g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~ 404 (742)
T TIGR01299 325 GSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQED 404 (742)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhh
Confidence 112479999999888877777777778888876432211000 00 0000
Q ss_pred -------hhh------------hhHHHHHHhhhhhcch----hHHHHHHHhhhccchhHHHHHHHHHHHHh---------
Q 009914 207 -------FRS------------DVKVLIQEAKSVIKIP----SFQIIVAQGVTGSFPWSALSFAAMWLELT--------- 254 (522)
Q Consensus 207 -------~~~------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 254 (522)
... .....+...+.+++.+ .+.+.++.++.....|+...|+|.++++.
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~ 484 (742)
T TIGR01299 405 ELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALT 484 (742)
T ss_pred hhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 000 0000111233333332 23344444444555678888999876431
Q ss_pred ---------------------------------CC-----C---------------------------------------
Q 009914 255 ---------------------------------GF-----S--------------------------------------- 257 (522)
Q Consensus 255 ---------------------------------g~-----~--------------------------------------- 257 (522)
|+ +
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 564 (742)
T TIGR01299 485 KNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEY 564 (742)
T ss_pred ccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhh
Confidence 00 0
Q ss_pred -----------------------------hhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHH
Q 009914 258 -----------------------------HEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 308 (522)
Q Consensus 258 -----------------------------~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (522)
.........+..++.+++.++.++++||+|||+ .+... ..+.++.
T Consensus 565 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~-----~l~~~-~~lsai~ 638 (742)
T TIGR01299 565 KFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLR-----MLAGS-MVLSCIS 638 (742)
T ss_pred hhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH-----HHHHH-HHHHHHH
Confidence 001233355667889999999999999999984 32221 1111111
Q ss_pred HHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 309 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
...+. . .++... +++..++.+++.+...+ ....+++|.+|++.|++++|+.+....+|.+++|+++|.+.+.
T Consensus 639 ~ll~~---~--~~s~~~-ll~~~~l~g~~~~~~~~-~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~ 710 (742)
T TIGR01299 639 CFFLS---F--GNSESA-MIALLCLFGGLSIAAWN-ALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI 710 (742)
T ss_pred HHHHH---H--HccHHH-HHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111 1 122222 33444566666665566 6889999999999999999999999999999999999988875
No 20
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.9e-33 Score=278.42 Aligned_cols=371 Identities=16% Similarity=0.134 Sum_probs=257.2
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
+|..+..+++.......++..+++..|.+.++ |.|+.+.|++.+.+.+++.+++++.|+++||+|||++++++.++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHH
Confidence 34445555566666666666678888999888 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh----hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHH-HHHHHHHhhhcccc
Q 009914 84 ATFLVAFSS----TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSL-VGGLFSVVMAPMTF 158 (522)
Q Consensus 84 ~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~-~g~~l~~~l~~~~~ 158 (522)
+.+++++.+ +++.+++.|++.|++.+...+.....+.+++|+++|++++++.+.+.++|.. .+++++..+...
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-- 183 (452)
T PRK11273 106 VMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-- 183 (452)
T ss_pred HHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh--
Confidence 998888763 6888899999999999999888888999999999999999999999999874 555554444333
Q ss_pred cCCCCchHHHHHHHHHHHHHHHhhhhc-cCCCCCCCCCCCCC--c--cc---ccchhhhhhHHHHHHhhhhhcchhHHHH
Q 009914 159 MGIPGWRISFHIVGLISVVVGTLVRLF-ANDPHFPDGGTANS--D--QV---SSKSFRSDVKVLIQEAKSVIKIPSFQII 230 (522)
Q Consensus 159 ~~~~gw~~~f~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~--~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (522)
.+||+.|++.+++.++..++..++ +++|+....+++.+ . .+ .++....+.++.. .+.+++++.++..
T Consensus 184 ---~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 258 (452)
T PRK11273 184 ---NDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIF--MQYVLPNKLLWYI 258 (452)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHH--HHHHHcChHHHHH
Confidence 599999999988877766655554 44333211100000 0 00 0000000111111 1246678888776
Q ss_pred HHHhhhccc-hhHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHH
Q 009914 231 VAQGVTGSF-PWSALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 308 (522)
Q Consensus 231 ~~~~~~~~~-~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (522)
.+..++... .+....++|.|+++ .|++..+++.......++.+++.++.|+++||+++++. +........+..+
T Consensus 259 ~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~---~~~~~~~~~l~~~- 334 (452)
T PRK11273 259 AIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR---GATGVFFMTLVTI- 334 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCc---chHHHHHHHHHHH-
Confidence 555444433 45667899999975 79999999999888899999999999999999954321 1111111111111
Q ss_pred HHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhch-hhHHHHHHHHH
Q 009914 309 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSF-APPVVGILAQH 387 (522)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i-~~~~~g~l~~~ 387 (522)
....+.. ... ...+...+..+..|.+...... ....+..|.+|++.+|+++|+.+...++++.+ +|.+.|.+.|+
T Consensus 335 -~~~~~~~-~~~-~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~ 410 (452)
T PRK11273 335 -ATIVYWL-NPA-GNPTVDMACMIVIGFLIYGPVM-LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF 410 (452)
T ss_pred -HHHHHHH-hcc-cChHHHHHHHHHHHHHHHhHHH-HHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 1111111 111 1222233344445544332222 23456779999999999999999999988765 79999999999
Q ss_pred hhCc
Q 009914 388 VYGF 391 (522)
Q Consensus 388 ~~g~ 391 (522)
.||
T Consensus 411 -~g~ 413 (452)
T PRK11273 411 -FGW 413 (452)
T ss_pred -hcc
Confidence 566
No 21
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.3e-33 Score=281.69 Aligned_cols=363 Identities=15% Similarity=0.092 Sum_probs=250.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
+++.+...+...+...+......+..|.+.+++|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..+.+++++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 44566666677777777777888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc----ccc
Q 009914 84 ATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM----TFM 159 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~----~~~ 159 (522)
+.++++++++++.+++.|++.|++.+... ....++.+++|+++|++++++.....++|..+++.+.+.+... ...
T Consensus 114 ~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 192 (476)
T PLN00028 114 AVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAP 192 (476)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999987654 4567899999999999999999888888887777666544321 001
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc
Q 009914 160 GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF 239 (522)
Q Consensus 160 ~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (522)
+..|||+.|++.+++.++..++.++++++++....++..++.+.++ ....+..++.++++.+|.+.+..+....
T Consensus 193 ~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (476)
T PLN00028 193 SFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPK------DSFSKVLRYGVTNYRTWILALTYGYSFG 266 (476)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCcccc------ccHHHHHHHHHcCchhHHHHHHHHHHHH
Confidence 1258999999999998888777777665433211000000000000 0111234455677776655444333322
Q ss_pred -hhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 009914 240 -PWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVL 317 (522)
Q Consensus 240 -~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (522)
.+...++.|.|+. ++|++..+++.+.++..++.++++++.|+++||+++|+..+.|.........+... .... .
T Consensus 267 ~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i--~~~~--~ 342 (476)
T PLN00028 267 VELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGV--FCIW--L 342 (476)
T ss_pred HHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHH--HHHH--h
Confidence 3445667888885 57999999999999999999999999999999999875433333332222221111 1111 1
Q ss_pred CCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHH
Q 009914 318 PDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPV 380 (522)
Q Consensus 318 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~ 380 (522)
....+ .......+++.+++.+.... ..+++..+..| +.+|+..|+.+..+.+++.++|.+
T Consensus 343 ~~~~~-~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l 402 (476)
T PLN00028 343 GRANS-LGAAIVVMILFSIFVQAACG-ATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLL 402 (476)
T ss_pred cccch-HHHHHHHHHHHHHHHHHhhh-hhcccCcccCh-hhchhhhhhhhccccHHHHHHHHH
Confidence 21222 22233444555555544444 45555666554 688999998866554554444443
No 22
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=7.7e-33 Score=273.86 Aligned_cols=358 Identities=15% Similarity=0.138 Sum_probs=244.5
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcC---CChhhhHH---HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALH---TDPTGLGS---LTLFRSIVQASCYPIAAYLAIRHNRAHVIALG 77 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~g~---~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~ 77 (522)
+++.+...+++.++++++...++...|.+.++++ .+..+.+. +.+...++..++++++|+++||+|||+++..+
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3445666778899999999999999999999985 55554444 44555555669999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 009914 78 AFLWAAATFLVAFSSTFA--------QVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLF 149 (522)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l 149 (522)
.++++++++++++++++. .++++|+++|++.|..++...+++.|++|+++|+++.++...+...|.++++.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988764 588999999999999999999999999999999999999998888888888877
Q ss_pred HHhhhccc---ccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchh
Q 009914 150 SVVMAPMT---FMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPS 226 (522)
Q Consensus 150 ~~~l~~~~---~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (522)
...+.... ....+|||++|++.+++.++...+....+|+++.+.++ .++ ....+++++++.
T Consensus 180 ~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~------~~~----------~~~~~~l~~~~~ 243 (432)
T PRK10406 180 VVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA------LKE----------AGSLKGLWRNRR 243 (432)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh------hcc----------cccHHHHHhhHH
Confidence 65543210 00127999999998887766544333333332211100 000 012233455555
Q ss_pred HHHHHHHhh-h-ccchhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHH
Q 009914 227 FQIIVAQGV-T-GSFPWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISS 303 (522)
Q Consensus 227 ~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 303 (522)
.+....... . ....+...+|+|.|++ ++|++..+.+....+..+..+++..+.|+++||++||+ .......
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~-----~~~~~~~- 317 (432)
T PRK10406 244 AFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRT-----SMLCFGS- 317 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH-----HHHHHHH-
Confidence 554433322 2 2334567789999986 58999988888888888888888999999999999884 3222211
Q ss_pred HHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHH-HhchhhHHHH
Q 009914 304 LSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESI-LSSFAPPVVG 382 (522)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~~g 382 (522)
+..+......... ..... .........+..+..+...+ ....+..|.+|++.|+++.|+.+.+.++ .+...|.+.+
T Consensus 318 ~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~ 394 (432)
T PRK10406 318 LAALFTVPILSAL-QNVSS-PYAAFGLVMCALLIVSFYTS-ISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL 394 (432)
T ss_pred HHHHHHHHHHHHH-HcCCc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH
Confidence 1111111111111 11112 22122222222222222233 4577889999999999999999988775 3555777777
Q ss_pred HHHHH
Q 009914 383 ILAQH 387 (522)
Q Consensus 383 ~l~~~ 387 (522)
.+ +.
T Consensus 395 ~l-~~ 398 (432)
T PRK10406 395 SL-KS 398 (432)
T ss_pred HH-HH
Confidence 54 54
No 23
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.2e-33 Score=283.95 Aligned_cols=372 Identities=16% Similarity=0.193 Sum_probs=263.5
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
++|+.+..++++.+++.++.....+.+|.+.+++|.|+.+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
++.+++++.++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+. .
T Consensus 97 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~ 171 (496)
T PRK03893 97 VGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV-----W 171 (496)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----C
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887 8
Q ss_pred CchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchh-hhhhHHHHH-------------Hhhhh-------
Q 009914 163 GWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSF-RSDVKVLIQ-------------EAKSV------- 221 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~------- 221 (522)
+||+.|++.++..++..+.....++.++...++++..+.++..+. ....++... .....
T Consensus 172 ~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (496)
T PRK03893 172 GWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIV 251 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHH
Confidence 999999875554433332222334332211111110000000000 000000000 00000
Q ss_pred --------------------hcchhHHHHHHHhhhcc-chhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhh
Q 009914 222 --------------------IKIPSFQIIVAQGVTGS-FPWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFG 279 (522)
Q Consensus 222 --------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 279 (522)
.+.+....+....+... ..+....++|.|++ ++|++..+.+.+.+...++.+++.++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~ 331 (496)
T PRK03893 252 AVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVG 331 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000111111111 11234567899996 799999999999999999999999999
Q ss_pred hhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchh
Q 009914 280 GRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSR 359 (522)
Q Consensus 280 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 359 (522)
|++.||+++|+ .+.... .+... ..+.... . .....+......++.++......+ ....++.+.+|++.|
T Consensus 332 g~l~dr~g~~~-----~~~~~~-~~~~~--~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 400 (496)
T PRK03893 332 GFLGDWLGTRK-----AYVCSL-LISQL--LIIPVFA-I-GGANVWVLGLLLFFQQMLGQGISG-LLPKLIGGYFDTEQR 400 (496)
T ss_pred HHHHHHhcchH-----HHHHHH-HHHHH--HHHHHhh-c-cccHHHHHHHHHHHHHHHhcccch-hhHHHHHhhCCHHHh
Confidence 99999999883 322221 11111 1111111 1 122222232333333333323334 567788999999999
Q ss_pred HHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 360 TSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 360 ~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
++++|+.+....+++.++|.+.|.+.|. .|+
T Consensus 401 g~~~~~~~~~~~~g~~lgp~l~g~l~~~-~g~ 431 (496)
T PRK03893 401 AAGLGFTYNVGALGGALAPILGALIAQR-LDL 431 (496)
T ss_pred hcccchhhhhhhHHHHHHHHHHHHHhcc-CCh
Confidence 9999999999999999999999999998 565
No 24
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=7.2e-33 Score=270.96 Aligned_cols=354 Identities=13% Similarity=0.104 Sum_probs=268.1
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHH
Q 009914 2 KQETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLW 81 (522)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~ 81 (522)
.+|++..+..+++.++.+.....+++.+|.+.+++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46777888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 009914 82 AAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGI 161 (522)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~ 161 (522)
+++.++++++++++.+++.|+++|++.+...+...+++.+++|+++|++.++..+....+|..++|.+.+.+....
T Consensus 83 ~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---- 158 (394)
T PRK03699 83 ILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS---- 158 (394)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988776421
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-h
Q 009914 162 PGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-P 240 (522)
Q Consensus 162 ~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (522)
.+||++|.+.+++.++..++.++ .+.|+.++++. ++.+ + . .+..+ ++.++.+....+.... .
T Consensus 159 ~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~~--~~~~-~-----~-------~~~~~-~~~~~~~~~~~~~~~~~~ 221 (394)
T PRK03699 159 IEWYWVYACIGLVYVAIFILTLF-SEFPALGKHAP--KADK-P-----V-------AKEKW-GIGVLFLAIAALLYILAQ 221 (394)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHh-cCCccccccCc--cccC-c-----c-------ccccC-ChHHHHHHHHHHHHHHHH
Confidence 69999999988877766554433 22232111111 0000 0 0 01111 2333333333333322 3
Q ss_pred hHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCC
Q 009914 241 WSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPD 319 (522)
Q Consensus 241 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (522)
+....|.|.|++ ++|+++.+.+.+.+...++.++++++.++++||+++|+ ....... .. .. . ...+...
T Consensus 222 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-----~l~~~~~-~~-~~-~-~~~~~~~- 291 (394)
T PRK03699 222 LTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR-----ILTVLAG-LA-LV-L-MYLFVNT- 291 (394)
T ss_pred HHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh-----HHHHHHH-HH-HH-H-HHHHHHc-
Confidence 466689999996 58999999999999999999999999999999999884 3222211 11 11 1 1111111
Q ss_pred CCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 320 DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 320 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
++ ........+..|++.+...+ ...+...+..| +.+++..|.......+|..++|.+.|++.+. .|+
T Consensus 292 -~~-~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~-~g~ 358 (394)
T PRK03699 292 -DD-PSHLLYAILGLGFFSSAIYT-TIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAH-FGL 358 (394)
T ss_pred -CC-chHHHHHHHHHHHHHHHHHH-HHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCc
Confidence 12 22244456677777766666 56667777766 4467788899999999999999999999998 565
No 25
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=2.8e-33 Score=272.09 Aligned_cols=353 Identities=16% Similarity=0.152 Sum_probs=277.8
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 009914 10 LVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVA 89 (522)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~ 89 (522)
.+..+.++..+......+.+|.+..+++.++.++|++.+++.++..++++++|+++||+|||+++..+.++.+++.++..
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 82 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP 82 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 35677788888888889999999999999999999999999999999999999999999999999999999988888888
Q ss_pred hhh-----hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCc
Q 009914 90 FSS-----TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGW 164 (522)
Q Consensus 90 ~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw 164 (522)
+.+ +++.+++.|++.|++.+...+...+++.|++|+++|++.+++.+....+|.++||.+++.+.+. .+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-----~g~ 157 (365)
T TIGR00900 83 FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT-----LGI 157 (365)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-----hhH
Confidence 887 9999999999999999999999999999999999999999999999999999999999999887 899
Q ss_pred hHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccch-hHH
Q 009914 165 RISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFP-WSA 243 (522)
Q Consensus 165 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 243 (522)
|+.|++.++..++..+..+....+ +..+.+++ + .++ +..++..+..+..+++|.++......+..... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (365)
T TIGR00900 158 KWAIWVDAVGFAISALLIVSVRIP-ELAASEIQ-A---LSN---AVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPA 229 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc-cCCCcccc-c---cch---hHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 999999887766665554443221 11111110 0 000 11123334556677888877666555444443 334
Q ss_pred H-HHHHHHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 009914 244 L-SFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDP 321 (522)
Q Consensus 244 ~-~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (522)
. .+.|.|.++ +|.+..+.+.+.....++.+++.++.+++.||+++++ ..... ....++.. .. .... +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~-~~~~~~~~--~~-~~~~--~ 298 (365)
T TIGR00900 230 IVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMA-----LMTGA-IFVIGLAI--LV-VGLT--P 298 (365)
T ss_pred HHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhH-----HHHHH-HHHHHHHH--HH-HHhh--c
Confidence 4 678888875 8999999999999999999999999999999998873 22221 11111111 11 1111 1
Q ss_pred chhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 322 STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
++.+...+..++.|++.+...+ ...+++.|.+|+++|+++.|+.+...+++..++|.+.|.+.|.
T Consensus 299 ~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 299 PNFPLFLVLWFAIGVGYGPINV-PQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1244466677888888888877 7889999999999999999999999999999999999999987
No 26
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=3.9e-32 Score=266.41 Aligned_cols=362 Identities=16% Similarity=0.175 Sum_probs=261.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAA 84 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~ 84 (522)
++.+....++.++...........++.+.+++|.|+++.|++.+.+.++..+++++.|++.||+|||+++..+..+.+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG 91 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 56677778888887777776666777778899999999999999999999999999999999999999999999998888
Q ss_pred HHHHH---h-hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHH-HHHHHHHHhhhccccc
Q 009914 85 TFLVA---F-SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGS-LVGGLFSVVMAPMTFM 159 (522)
Q Consensus 85 ~~~~~---~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~-~~g~~l~~~l~~~~~~ 159 (522)
.+++. . .++++.+++.|++.|++.+...+...+.+.+++|+++|++++|+.+...++|. ++++++++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~--- 168 (402)
T TIGR00897 92 HAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA--- 168 (402)
T ss_pred HHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---
Confidence 76553 3 25788889999999999988888888899999999999999999999999997 6899999988876
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc
Q 009914 160 GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF 239 (522)
Q Consensus 160 ~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (522)
.||+..++......++..++..++.++++.++.++ + +. .. ++..+..+.++++|.++......++...
T Consensus 169 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (402)
T TIGR00897 169 --FGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ--T--RE---KF---SELGKAATILFTNPNVLLGGMVRIINTI 236 (402)
T ss_pred --cchHHHHHHHHHHHHHHHHHHHhccCCCCCccccc--C--Cc---ch---hhHHHHHHHHHcChhHHHHHHHHHHHHH
Confidence 78666655544433333333344333322111110 0 00 01 2223345567788888766554444333
Q ss_pred -hhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCC
Q 009914 240 -PWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP 318 (522)
Q Consensus 240 -~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (522)
.+...++.|.|++++|++..+.+.+.....++.+++.++.|+++||+++|+ ...........+....+......
T Consensus 237 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-----~~~~~~~l~~~~~~~~l~~~~~~ 311 (402)
T TIGR00897 237 GLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN-----TVRWFGGVGCGIFTLALYYIPQH 311 (402)
T ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHHHHc
Confidence 456667899999889999999999999999999999999999999999874 22111111111111111111111
Q ss_pred CCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 319 DDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
. .+..+...+..++.|++.+...+ ......+.. +++|+++.|+.+....+++.++|.+.|.+.+. .|+
T Consensus 312 ~-~~~~~~~~~~~~~~G~~~~~~~~--~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~-~g~ 379 (402)
T TIGR00897 312 F-GHSFAVALIIAIALGIFLAGYVP--LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF-FGA 379 (402)
T ss_pred c-CCcHHHHHHHHHHHHHHHHHHHH--HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cch
Confidence 1 12233344566677777665544 345566654 46899999999999999999999999999998 564
No 27
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=8.2e-33 Score=269.40 Aligned_cols=351 Identities=14% Similarity=0.167 Sum_probs=255.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~ 85 (522)
+.+..+.+..+..........+.+|.+.+++|.|.++.|++.+++.+++.++++++|+++||+|||+++..+..+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 45667777888888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCch
Q 009914 86 FLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWR 165 (522)
Q Consensus 86 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~ 165 (522)
++++++++++.+++.|++.|++.+...+....++.+++++++|++++++...+..+|..+++++++.+.+. .+||
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-----~gwr 157 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQE-----FSWR 157 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhh-----ccHH
Confidence 99999999999999999999999998888889999999999999999999999999999999999999877 8999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhcc-chhHHH
Q 009914 166 ISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGS-FPWSAL 244 (522)
Q Consensus 166 ~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 244 (522)
++|++.+++.++..+..++..++++++ ++ . + .++. .+.++++..+.......... ..+...
T Consensus 158 ~~f~~~~~~~~~~~~~~~~~lp~~~~~--~~---~---~------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (382)
T PRK10091 158 YTFLLIAVFNIAVLASIYFWVPDIRDE--AK---G---G------LREQ----FHFLRSPAPWLIFAATMFGNAGVFAWF 219 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcc--cc---c---C------HHHH----HHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 999999888777666554433332111 00 0 0 0111 12345555554433332222 223334
Q ss_pred HHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCch
Q 009914 245 SFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPST 323 (522)
Q Consensus 245 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (522)
++.+.+++ ..|+++.+.+.+.....++.++++++.+++.||+++++ ...... .+..+. .+.+.... +.
T Consensus 220 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~-----~~~~~~-~~~~i~--~~~~~~~~--~~- 288 (382)
T PRK10091 220 SYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLR-----IAAVTD-FIIVLA--LLMLFFFG--GM- 288 (382)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchh-----HHHHHH-HHHHHH--HHHHHHHH--hh-
Confidence 56666665 58999999999999999999999999999999998874 222211 111111 11111111 11
Q ss_pred hHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcc
Q 009914 324 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~ 392 (522)
.+...+..++.+++.....++.......+..|++.++.+ ..+....+|.++||.+.|++.|...+|.
T Consensus 289 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~ 355 (382)
T PRK10091 289 KTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYN 355 (382)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcc
Confidence 222333344444444333331222344444455555544 3466788999999999999999756663
No 28
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.8e-33 Score=276.35 Aligned_cols=353 Identities=13% Similarity=0.072 Sum_probs=269.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFL 87 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~ 87 (522)
+..+.+..++..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+..+.+++.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~ 98 (417)
T PRK10489 19 FRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIG 98 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHH
Confidence 44555667777788888899999999999999999999999999999999999999999999999988888877776665
Q ss_pred HHh-----hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 88 VAF-----SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 88 ~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
.+. .++++.+++.|++.|++.+...++..+++.+++|+++|+++.++.....++|..+||.+++.+.+. .
T Consensus 99 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~-----~ 173 (417)
T PRK10489 99 LALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA-----G 173 (417)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH-----H
Confidence 442 467888999999999999998999999999999999999999999999999999999999999887 7
Q ss_pred CchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchhH
Q 009914 163 GWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWS 242 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (522)
+|++.|++.++..++..++.+.+++.++..++ +++ . .++..+..+..+++|.++......+.......
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (417)
T PRK10489 174 GVAWNYGLAAAGTFITLLPLLRLPALPPPPQP-----REH----P---LRSLLAGFRFLLASPVVGGIALLGGLLTMASA 241 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc-----ccc----c---hHHHHHHHHHHHcChHHHHHHHHHHHHHHHHh
Confidence 99999999888777666665555543321110 000 0 12233344556677776555444333333345
Q ss_pred HHHHHHHHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 009914 243 ALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDP 321 (522)
Q Consensus 243 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (522)
...+.|.|+++ +|.++.+.+++.+...++.+++.++.+++.||.++++ .+.... .+..+ ..+ .+.. .
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~-----~l~~~~-~~~~~--~~~-~~~~---~ 309 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGL-----LMLLST-LGSFL--AVG-LFGL---M 309 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcch-----HHHHHH-HHHHH--HHH-HHHc---c
Confidence 55678999986 8999999999999999999999999999998855442 222211 11111 111 1111 1
Q ss_pred chhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 322 STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
++.+...+..++.|++.+...+ ...+++.+..|++.||+++|+.+...+++..++|.+.|++.+. .|+
T Consensus 310 ~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~-~g~ 377 (417)
T PRK10489 310 PMWILAVLCLALFGYLSAISSL-LQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM-MTP 377 (417)
T ss_pred chHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH-hch
Confidence 2334455667777887776666 5678889999999999999999999999999999999999998 554
No 29
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=6.7e-32 Score=260.17 Aligned_cols=383 Identities=12% Similarity=0.063 Sum_probs=280.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHH-hcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGA-ALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
++.+.+..++.++......+++++.+.+.+ ++|+|++|.+++.+++.+++.+..++.|++.||+|.|+++.++.++.++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 478888889999999999999999999876 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-----hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc---
Q 009914 84 ATFLVAFS-----STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP--- 155 (522)
Q Consensus 84 ~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~--- 155 (522)
.++.++++ ++++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+..
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l 191 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPV 191 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999987 8999999999999998 77889999999999999999999999987777777766666554331
Q ss_pred --cc--------ccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcch
Q 009914 156 --MT--------FMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIP 225 (522)
Q Consensus 156 --~~--------~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (522)
.. ..+..+||.++++..++.++..++.+++.++++.. +...++.+..+|+|
T Consensus 192 ~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~-------------------~~~~~~~~~vlk~~ 252 (462)
T PRK15034 192 FAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS-------------------RASIADQLPVLQRL 252 (462)
T ss_pred HHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-------------------ccCHHHHHHHhCCC
Confidence 10 00124588888888888888777777765443221 11123445678888
Q ss_pred hHHHHHHHhhhccchhH-HHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHH
Q 009914 226 SFQIIVAQGVTGSFPWS-ALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSL 304 (522)
Q Consensus 226 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 304 (522)
..|.+....++.+..+. ...++|.|.++ .++.........+..+...+.++++|+++||+|+++ .+.......
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~-----vl~~~~i~~ 326 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVR-----VTLINFIFM 326 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchH-----HHHHHHHHH
Confidence 88887766666665554 44589999875 334333333344556788889999999999999984 333322212
Q ss_pred HHHHHHHHHHHhCCCC-CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCc---------------------chhHHH
Q 009914 305 SAIPLAALLLLVLPDD-PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPE---------------------KSRTSV 362 (522)
Q Consensus 305 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 362 (522)
... ....+...+.. ..+.+.....++.+.++.+..+. ..+-++.+.+|+ ++.|.+
T Consensus 327 ~i~--~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gng-svfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v 403 (462)
T PRK15034 327 AIF--SALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSG-STFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAA 403 (462)
T ss_pred HHH--HHHHHHHhccccccHHHHHHHHHHHHHHHhcccch-HHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHH
Confidence 111 11112222221 12334444444454555555555 566677777763 257889
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHhhCcccCCCCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009914 363 YAMDRSFESILSSFAPPVVGILAQHVYGFKPIPKGSSATEEIATDRANAASLAKALYTAIGIPMALCCFIYSFLYSTY 440 (522)
Q Consensus 363 ~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (522)
.|+....+.+|+++.|.+.|...+...++ ...+..+.+..++|.++.+..+.|.
T Consensus 404 ~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~------------------------~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 404 LGFISAIGAVGGFFIPQAFGMSLNMTGSP------------------------VGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred HHHHHHHHHcccchhhHHHHHHHHHcCCc------------------------HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999886555 3345666666676777766665543
No 30
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=6.9e-32 Score=265.57 Aligned_cols=357 Identities=13% Similarity=0.038 Sum_probs=270.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAA 84 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~ 84 (522)
+.....+.+..+...+....+.+.+|.+.+++|.|+.+.++..+.+.+++.+++++.|+++||+|||+++..+..+.+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~ 91 (406)
T PRK15402 12 LLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILT 91 (406)
T ss_pred HHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 34455566666777778888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCc
Q 009914 85 TFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGW 164 (522)
Q Consensus 85 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw 164 (522)
.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|.+.+++......+|..+||.+++.+.+. .+|
T Consensus 92 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~~w 166 (406)
T PRK15402 92 CLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV-----LPW 166 (406)
T ss_pred HHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCc
Confidence 999999999999999999999999998899999999999999999999999998999999999999999887 799
Q ss_pred hHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHH
Q 009914 165 RISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSA 243 (522)
Q Consensus 165 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 243 (522)
|+.|++.+++.++..+..++..++++...++ + . +.++..++.+..+++|.++........... ....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPETAGRVGE----K-L-------SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAW 234 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCCccccc----c-c-------cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 9999998888877766555433332211100 0 0 012334455677888887776554433333 2333
Q ss_pred HHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 009914 244 LSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS 322 (522)
Q Consensus 244 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (522)
..+.|.+++ ++|+++.+.+.......++.+++.++.+++.||+++|+ ...... ....+........... ...
T Consensus 235 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~-----~~~~~~-~~~~~g~~~~~~~~~~-~~~ 307 (406)
T PRK15402 235 IALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRS-----LIRMGL-WPMVAGLLLAALATVI-SSH 307 (406)
T ss_pred HHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-----HHHHHH-HHHHHHHHHHHHHHHc-ccc
Confidence 455787775 58999999998888888888999999999999998873 322221 1111111111111111 122
Q ss_pred hhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 323 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 323 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
..+......++.|++.+...+ ......... +++++|++.++.+....++..+|+.+.+.+.+.
T Consensus 308 ~~~~~~~~~~~~g~g~~~~~~-~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~ 370 (406)
T PRK15402 308 AYLWLTAGLSLYAFGIGLANA-GLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG 370 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHhh-hHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 333355667778888877666 444444433 458899999999999999999999999999877
No 31
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.7e-32 Score=275.43 Aligned_cols=372 Identities=16% Similarity=0.198 Sum_probs=281.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAA 84 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~ 84 (522)
++.++.++++.++..++...+.+.+|.+.+++|.++.+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 44677788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCc
Q 009914 85 TFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGW 164 (522)
Q Consensus 85 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw 164 (522)
.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|++++++.....++|..+||.+++.+.+. .+|
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~-----~gw 163 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY-----ASW 163 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh-----ccH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987 899
Q ss_pred hHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCc---------------ccccchhhhh--h----------------
Q 009914 165 RISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSD---------------QVSSKSFRSD--V---------------- 211 (522)
Q Consensus 165 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~--~---------------- 211 (522)
|+.|++......+..+......++.+....+.+... ...+...+.. .
T Consensus 164 ~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (471)
T PRK10504 164 HWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLL 243 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHH
Confidence 999999887776666665554333221111110000 0000000000 0
Q ss_pred HHHH----HHhhhhhcchhHHHHHHHhhhccchhH-HHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhH
Q 009914 212 KVLI----QEAKSVIKIPSFQIIVAQGVTGSFPWS-ALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF 285 (522)
Q Consensus 212 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 285 (522)
++.. ....+++++|.+...+...++....+. ...+.|.|++ ..|.++.+.++......++.+++.++.+++.||
T Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r 323 (471)
T PRK10504 244 HARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR 323 (471)
T ss_pred HHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 001236788888777666555554443 3356888887 489999999999998888888898999999999
Q ss_pred hhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHH
Q 009914 286 LSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAM 365 (522)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 365 (522)
+++|+ .+..... +..+ ....+..... ..+.+......++.|++.+...+ ....+..+.+|++.+++++|+
T Consensus 324 ~g~~~-----~~~~~~~-~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~ 393 (471)
T PRK10504 324 FGYRR-----VLVATTL-GLAL--VSLLFMLVAL-LGWYYLLPFVLFLQGMVNSTRFS-SMNTLTLKDLPDNLASSGNSL 393 (471)
T ss_pred cCchH-----HHHHHHH-HHHH--HHHHHHhccc-cccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCHHhccchHHH
Confidence 99883 3322211 1111 1111112221 22233233455666777776666 677888899999999999999
Q ss_pred HHHHHHHHhchhhHHHHHHHHHhhCcc
Q 009914 366 DRSFESILSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 366 ~~~~~~~~~~i~~~~~g~l~~~~~g~~ 392 (522)
.++...++..+|+.+.|.+.+. .|+.
T Consensus 394 ~~~~~~~g~~ig~~i~g~ll~~-~g~~ 419 (471)
T PRK10504 394 LSMIMQLSMSIGVTIAGLLLGL-FGQQ 419 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hhhh
Confidence 9999999999999999999998 5663
No 32
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=3.8e-34 Score=286.54 Aligned_cols=377 Identities=14% Similarity=0.114 Sum_probs=274.9
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhhhhHHHHHHH----------------------hcCCChhhhHHHHHHHHHHHHhhhh
Q 009914 2 KQETVTLVLVNLAGIMERADESLLPGVYKEVGA----------------------ALHTDPTGLGSLTLFRSIVQASCYP 59 (522)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~g~s~~~~g~~~s~~~~~~~i~~~ 59 (522)
+.|+....+++++..+++.++..++...+.+.+ +++++..+.|++.+.+.+++.++++
T Consensus 15 ~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~ 94 (465)
T TIGR00894 15 SFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQI 94 (465)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHc
Confidence 356778888889999999999999988888876 7899999999999999999999999
Q ss_pred hHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHH
Q 009914 60 IAAYLAIRHNRAHVIALGAFLWAAATFLVAFS--STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQL 137 (522)
Q Consensus 60 ~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 137 (522)
+.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.+++|+++|++++++...
T Consensus 95 ~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 174 (465)
T TIGR00894 95 PVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTS 174 (465)
T ss_pred chHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999988887554 5688899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccCCC-CchHHHHHHHHHHHHHHHhhhhccCC-CCCCCCCCCCCccc---ccchhhhhhH
Q 009914 138 TSNIGSLVGGLFSVVMAPMTFMGIP-GWRISFHIVGLISVVVGTLVRLFAND-PHFPDGGTANSDQV---SSKSFRSDVK 212 (522)
Q Consensus 138 ~~~lg~~~g~~l~~~l~~~~~~~~~-gw~~~f~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~ 212 (522)
+..+|.++++++++.+.+. . +||++|++.+++.++..++.+.++++ |+..+..++.+++. ..+....+ .
T Consensus 175 ~~~~g~~i~~~l~~~l~~~-----~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~-~ 248 (465)
T TIGR00894 175 GFQLGTFIFLPISGWLCES-----WGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGS-T 248 (465)
T ss_pred HHHHHHHHHHHHHHHHHhc-----cCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCC-C
Confidence 9999999999999998875 4 99999999999888877777665544 33222111100000 00000000 0
Q ss_pred HHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcC
Q 009914 213 VLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARF 290 (522)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 290 (522)
+....++++++++.++......+.... .+...+|+|.|++ .+|++..+.++..++..++.+++.++.|+++||+++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~ 328 (465)
T TIGR00894 249 RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSK 328 (465)
T ss_pred CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 001124567788887777665555444 4566689999996 58999999999999999999999999999999988765
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHH
Q 009914 291 PNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFE 370 (522)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (522)
....+..................+.. .......+....++.+.+.+.+...+ .......+..| +.+|.+.|+.+..+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~ 405 (465)
T TIGR00894 329 TLSLTAARKIFNGIGGLGPGIFAYAL-PYLSAAFYLTIIILTLANAVSSGPLA-GVLINSLDLAP-RFLGFIKGITGLPG 405 (465)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHH-HHcCCchHHHHHHHHHHHHHhhhhhh-hhhhchhhcCh-hHHHHHHHHHHHHH
Confidence 43222111111111111111111111 11112222233344444444444444 44555667776 48999999999999
Q ss_pred HHHhchhhHHHHHHHHH
Q 009914 371 SILSSFAPPVVGILAQH 387 (522)
Q Consensus 371 ~~~~~i~~~~~g~l~~~ 387 (522)
.+++.++|.+.|.+.+.
T Consensus 406 ~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 406 FIGGLIASTLAGNILSQ 422 (465)
T ss_pred HHHHHHHHHhhheeeCC
Confidence 99999999999988765
No 33
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=3.5e-32 Score=269.39 Aligned_cols=365 Identities=15% Similarity=0.174 Sum_probs=248.8
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHH-HHH-----HHHHHhhhhhHHHHHHHhchhHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLT-LFR-----SIVQASCYPIAAYLAIRHNRAHVIAL 76 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~-s~~-----~~~~~i~~~~~G~l~Dr~grr~~l~~ 76 (522)
.|++....++++.+++++++..+++..|.+.++++.++.+.+.+. +.. .+...+++++.|+++||+|||+.++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 91 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV 91 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH
Confidence 466778889999999999999999999999999999888765443 222 22334678999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHH
Q 009914 77 GAFLWAAATFLVAFSSTFA--------QVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGL 148 (522)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~ 148 (522)
+.++++++.++++++++++ .++++|+++|++.+...+....++.|++|+++|++++++...+.++|..+++.
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999877 46889999999999999999999999999999999999999999998888888
Q ss_pred HHHhhhcccc---cCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcch
Q 009914 149 FSVVMAPMTF---MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIP 225 (522)
Q Consensus 149 l~~~l~~~~~---~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (522)
+++.+..... ....|||++|++..+...+. ......++|.+....+ ++ + ... ++.. +...+++
T Consensus 172 ~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~---~~-~---~~~---~~~~---~~~~~~~ 237 (434)
T PRK15075 172 LGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFI-FLIRRSLEETEEFLAR---KH-R---PSM---REIF---RSLAANW 237 (434)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHHhcCCCHHHHHh---hh-c---ccc---ccHH---HHHHHhH
Confidence 8877642100 01279999999754432221 1111112111000000 00 0 000 1111 1122232
Q ss_pred hHHHH-HHHh-hhccchhHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHH
Q 009914 226 SFQII-VAQG-VTGSFPWSALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQIS 302 (522)
Q Consensus 226 ~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 302 (522)
..+.. +... +.....+....|.|.|+++ +|++..+.++......++.+++.++.|+++||+++|+ .......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~-----~~~~~~~ 312 (434)
T PRK15075 238 RIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRP-----VLIAFTV 312 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-----HHHHHHH
Confidence 22222 2222 2222234566789999975 8999999998888889999999999999999999884 3322211
Q ss_pred HHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHH-HhchhhHHH
Q 009914 303 SLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESI-LSSFAPPVV 381 (522)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~~ 381 (522)
. ... .....+......+ ..........+.+++.+...+ ....+..|.+|++.|+++.|+.+.+... ++.++|.+.
T Consensus 313 ~-~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~-~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~ 388 (434)
T PRK15075 313 L-AIL-TAYPALSWLVAAP-SFARMLAVELWLSFLYGSYNG-AMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAIS 388 (434)
T ss_pred H-HHH-HHHHHHHHHHcCC-chHHHHHHHHHHHHHHHHHHh-hHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHH
Confidence 1 111 1111111111112 222222333444555555555 5667889999999999999997666654 588899999
Q ss_pred HHHHHHhhCc
Q 009914 382 GILAQHVYGF 391 (522)
Q Consensus 382 g~l~~~~~g~ 391 (522)
|++.|. .|+
T Consensus 389 g~i~~~-~g~ 397 (434)
T PRK15075 389 TWLIHV-TGD 397 (434)
T ss_pred HHHHHh-cCC
Confidence 999998 454
No 34
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.4e-32 Score=275.26 Aligned_cols=373 Identities=14% Similarity=0.148 Sum_probs=254.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhc--------CCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAAL--------HTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIAL 76 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~ 76 (522)
.+..++..++.+..+++....++..|.+.+.+ +.++.+.+++.+++.++..++++++|+++||+|||+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~ 90 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI 90 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 45667777888999999999999999998887 8899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh------------hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHH
Q 009914 77 GAFLWAAATFLVAFS------------STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSL 144 (522)
Q Consensus 77 ~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~ 144 (522)
+.++.+++.+++++. +.++.+++.|+++|++.|...+...++++|++|+++|++++++.+.+..+|.+
T Consensus 91 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~ 170 (479)
T PRK10077 91 AAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL 170 (479)
T ss_pred HHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH
Confidence 999999888877763 23567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccc---ccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCccc----------ccchhhhhh
Q 009914 145 VGGLFSVVMAPMT---FMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQV----------SSKSFRSDV 211 (522)
Q Consensus 145 ~g~~l~~~l~~~~---~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 211 (522)
+++.++..+.... .....+||++|++.++..++..+..++++++|++...+++.++.+ ..+...++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (479)
T PRK10077 171 VVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEI 250 (479)
T ss_pred HHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHH
Confidence 9988877654211 012369999999988888777766666776664321111111100 000001111
Q ss_pred HHHHHHhh----hhhcchhHHHHH--HH-hhhccc-hhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhh
Q 009914 212 KVLIQEAK----SVIKIPSFQIIV--AQ-GVTGSF-PWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMG 283 (522)
Q Consensus 212 ~~~~~~~~----~~~~~~~~~~~~--~~-~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 283 (522)
++..+..+ ..+......... .. .+.... .+....+.|.+.++.|++....+......++..+++.++.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~ 330 (479)
T PRK10077 251 KHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTV 330 (479)
T ss_pred HHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111000 001000000000 00 000011 12233456888788899887777777788889999999999999
Q ss_pred hHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHH
Q 009914 284 DFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVY 363 (522)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (522)
||+++|+ ...... .+..+....+....... ... .......++.+++.+....+..+.++.|.+|++.|+++.
T Consensus 331 dr~g~r~-----~~i~~~-~~~~v~~~~l~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 402 (479)
T PRK10077 331 DKFGRKP-----LQIIGA-LGMAIGMFSLGTAFYTQ-APG-IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKAL 402 (479)
T ss_pred HHhcChH-----HHHHhH-HHHHHHHHHHHHHHhcC-ccc-HHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHH
Confidence 9999883 332222 22222111111111111 111 122233444444444332226789999999999999999
Q ss_pred HHHHHHHHHHhchhhHHHHHHH
Q 009914 364 AMDRSFESILSSFAPPVVGILA 385 (522)
Q Consensus 364 g~~~~~~~~~~~i~~~~~g~l~ 385 (522)
|+.+...+++..+++.+.+.+.
T Consensus 403 g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 403 AIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999987776554
No 35
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=1.3e-31 Score=260.97 Aligned_cols=349 Identities=17% Similarity=0.150 Sum_probs=259.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHH
Q 009914 1 MKQETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFL 80 (522)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~ 80 (522)
|++..+.+..+.++.++.........+.+|.+.+++|.|..++|++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~ 80 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLI 80 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 66777888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 009914 81 WAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMG 160 (522)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~ 160 (522)
.+++.++++++++++.+++.|+++|++.+...+...+.+.+..++++|++++++...+.++|..+|+.+++.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~---- 156 (381)
T PRK03633 81 FAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE---- 156 (381)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----
Confidence 9999999999999999999999999999999998888888889999999999999999999999999999998764
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-
Q 009914 161 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF- 239 (522)
Q Consensus 161 ~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (522)
..|...+. .+........+ .+...+++. .++ + +. . +.++.+++|.++......+....
T Consensus 157 -~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~-~~~---~---~~----~-------~~~~~~~~~~~~~~~~~~~~~~~~ 215 (381)
T PRK03633 157 -LMSVLPWV-TGLVLAAILPL-LFTRILNQQ-AEN---H---DS----T-------SIWPMLKLRQARLGVNGCIISGIV 215 (381)
T ss_pred -ccchHHHH-HHHHHHHHHHH-HHhcccCCC-CCC---C---CC----C-------CHHHHHHhcchHHHHHHHHHHHHH
Confidence 33333332 22222211111 121111111 100 0 00 0 01223455555544332222222
Q ss_pred hhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCC
Q 009914 240 PWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPD 319 (522)
Q Consensus 240 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (522)
.....+++|.|+++.|.++.+.+.+.+...++.+++++..+++.||+++|+ .+..... ...+ ......
T Consensus 216 ~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~-----~l~~~~~-~~~~--~~~~~~---- 283 (381)
T PRK03633 216 LGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL-----VLRVQVF-VVIL--GSIAML---- 283 (381)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH-----HHHHHHH-HHHH--HHHHHh----
Confidence 234456789999888999999999999999999999999999999999883 2222111 1111 111111
Q ss_pred CCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 320 DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 320 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
.... ......+.|++.....| ...+.+.|..|+++++...+..+...++|..++|.+.|++.|+ .|+
T Consensus 284 -~~~~--~~~~~~l~g~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~-~g~ 350 (381)
T PRK03633 284 -SQAA--MAPALFILGAAGFTLYP-VAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN-YSD 350 (381)
T ss_pred -hhHH--HHHHHHHHHHHHHhHHH-HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCc
Confidence 1111 22344455655555556 6778888999888888888888888899999999999999998 564
No 36
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=5.4e-32 Score=267.77 Aligned_cols=366 Identities=14% Similarity=0.119 Sum_probs=251.7
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHH-HHHhc--CCChhhhHHHH-----HHHHHHHHhhhhhHHHHHHHhchhHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKE-VGAAL--HTDPTGLGSLT-----LFRSIVQASCYPIAAYLAIRHNRAHVI 74 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--g~s~~~~g~~~-----s~~~~~~~i~~~~~G~l~Dr~grr~~l 74 (522)
++++.+....++.++++++...++.+.|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 35667788888999999999999988875 45555 67766 45553 345566778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHH
Q 009914 75 ALGAFLWAAATFLVAFSSTFA--------QVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVG 146 (522)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g 146 (522)
.++.+++++++++++++++++ .++++|+++|++.+..++....++.|++|+++|++..+....+..+|.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 588899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccc---cCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhc
Q 009914 147 GLFSVVMAPMTF---MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIK 223 (522)
Q Consensus 147 ~~l~~~l~~~~~---~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (522)
..+...+..... ...+|||++|++.+++.++...+....+|+|++.+.+.+.++.+++. ...+.+++
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~~~~~----------~~~~~l~~ 247 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAAKKRI----------PVIEALLR 247 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccccccC----------CHHHHHHH
Confidence 877776543100 01279999999988776554333223344333211111100000000 00112334
Q ss_pred chhHHHHHH-Hhh-hccchhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHH
Q 009914 224 IPSFQIIVA-QGV-TGSFPWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQ 300 (522)
Q Consensus 224 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 300 (522)
++..+.... ..+ .....+...+|.|.|++ ++|++......+....++..+++.++.|+++||++||+ .....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~-----~~~~~ 322 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRR-----VYITG 322 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH-----HHHHH
Confidence 444443322 222 22234566678898885 58888876666666667778888899999999999884 33322
Q ss_pred HHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHH-HHhchhhH
Q 009914 301 ISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFES-ILSSFAPP 379 (522)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~i~~~ 379 (522)
.. +............. ..+..+.+....++.+++.+...+ ..++++.|.+|++.|+++.|+.+.... +++.++|.
T Consensus 323 ~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~ 398 (438)
T PRK09952 323 AL--IGTLSAFPFFMALE-AQSIFWIVFFSIMLANIAHDMVVC-VQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPF 398 (438)
T ss_pred HH--HHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHH
Confidence 11 11111111111111 122233333444555666666555 678899999999999999999776655 88999999
Q ss_pred HHHHHHHHh
Q 009914 380 VVGILAQHV 388 (522)
Q Consensus 380 ~~g~l~~~~ 388 (522)
+.|++.+..
T Consensus 399 i~g~l~~~~ 407 (438)
T PRK09952 399 IAAALVTYF 407 (438)
T ss_pred HHHHHHHhc
Confidence 999999863
No 37
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=5.2e-33 Score=271.62 Aligned_cols=366 Identities=20% Similarity=0.214 Sum_probs=271.2
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhh
Q 009914 13 LAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSS 92 (522)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~ 92 (522)
++++...++...+.+..|.+.+++|.|+.+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 35667788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHH-HHHHhhhcccccCCCCchHHHHHH
Q 009914 93 TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGG-LFSVVMAPMTFMGIPGWRISFHIV 171 (522)
Q Consensus 93 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~-~l~~~l~~~~~~~~~gw~~~f~~~ 171 (522)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++ .++..+... .+||+.|++.
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~ 156 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-----YSWHWVFIVP 156 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-----CCchhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 566666665 7999999998
Q ss_pred HHHHHHHHHhhhhccCC-CCCCCCCCCCC---cc--cccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHH
Q 009914 172 GLISVVVGTLVRLFAND-PHFPDGGTANS---DQ--VSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSAL 244 (522)
Q Consensus 172 ~~~~~i~~~~~~~~~~~-~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 244 (522)
+++.++..++.++..++ |+....+..++ ++ +..+...++.+......+..+++|.++.+....+.... .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (379)
T TIGR00881 157 GIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGIL 236 (379)
T ss_pred HHHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 88877766666554433 32211110000 00 00000000001111233456677777766554444433 34566
Q ss_pred HHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCch
Q 009914 245 SFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPST 323 (522)
Q Consensus 245 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (522)
.+.|.|++ .+|++..+.+.......++.+++.++.+++.||..+++. ....... ..... .......... ...
T Consensus 237 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~----~~~~~~~-~~~~~-~~~~~~~~~~-~~~ 309 (379)
T TIGR00881 237 DWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRR----GPLAVFF-MALII-VSLLVYWLNP-AAN 309 (379)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcc----hHHHHHH-HHHHH-HHHHHHhcCc-chh
Confidence 78899886 589999999999999999999999999999998654431 1111111 11111 1111111111 122
Q ss_pred hHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcc
Q 009914 324 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~ 392 (522)
.+......++.|+......+ ....+..|.+|++.|+++.|+.+....+++.++|.+.|.+.|. .||.
T Consensus 310 ~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~ 376 (379)
T TIGR00881 310 PLMDLICLFALGFLVYGPQM-LIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG-FGWA 376 (379)
T ss_pred HHHHHHHHHHHHHHHhhhhH-HHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh-hccc
Confidence 33344455556655444444 4567889999999999999999999999999999999999998 6764
No 38
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=5.7e-33 Score=268.45 Aligned_cols=346 Identities=27% Similarity=0.382 Sum_probs=263.8
Q ss_pred HHHHHHHHHHHhhhhhhHHH-HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 009914 11 VNLAGIMERADESLLPGVYK-EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVA 89 (522)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~ 89 (522)
++++.++..+......+.+| .+.+++|.|+.+++++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh
Confidence 35677888888888999999 89999999999999999999999999999999999999999999999999999966666
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHH
Q 009914 90 FSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFH 169 (522)
Q Consensus 90 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~ 169 (522)
++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.....++|.++++.+++.+.+. .+||+.|+
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-----~~~~~~~~ 155 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY-----FGWRWAFL 155 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-----CHHCCHHH
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc-----cccccccc
Confidence 6688889999999999999999999999999999999999999999999999999999999999877 89999999
Q ss_pred HHHHHHHHHHHhhhh-ccCCCCCCCCCCCCCcccccchhhhhhHHHHH-HhhhhhcchhHHHHHHHhhhcc-chhHHHHH
Q 009914 170 IVGLISVVVGTLVRL-FANDPHFPDGGTANSDQVSSKSFRSDVKVLIQ-EAKSVIKIPSFQIIVAQGVTGS-FPWSALSF 246 (522)
Q Consensus 170 ~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 246 (522)
+.+++.++..++... ++++++..+.+++.+++++. ++... ..+..++++.++..+...+... .......+
T Consensus 156 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (352)
T PF07690_consen 156 ISAILSLIAAILFILFLPEPPPPRERESPKESESKK-------PKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFF 228 (352)
T ss_dssp HHHHHHHHHHHHHHCCC---STTTT--SSTTTT--H-------HHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhHhhhhhhccccccccccccccccc-------ccccccccccccccchhhhhhhhhhHHHHHHHHhhcc
Confidence 999998888775434 33333222222111110001 11111 2445556665553333333333 34456678
Q ss_pred HHHHH-HHhCCC-hhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 009914 247 AAMWL-ELTGFS-HEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 324 (522)
Q Consensus 247 ~~~~~-~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (522)
.|.|+ +++|++ ..+.+.+..+..+..+++.++.+++.||+++++ .......... + ....+. ......+.
T Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~-~--~~~~~~-~~~~~~~~ 299 (352)
T PF07690_consen 229 LPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR-----RLLIAILLLI-L--GALGLL-LLPFSSSP 299 (352)
T ss_dssp HHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH-----HHHHHHHHHH-H--HHHHHC-CSHHHCHH
T ss_pred cchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-----HHHHHHHHHH-H--HHHHHH-HHHHhhhH
Confidence 89985 578999 789999999999999999999999999998763 2222111111 1 111111 11111233
Q ss_pred HHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhh
Q 009914 325 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAP 378 (522)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~ 378 (522)
.......++.|++.+...+ ...+++.+.+|++++|++.|+.+...++++.++|
T Consensus 300 ~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFP-ILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCH-HHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4455677788888888888 8899999999999999999999999999999887
No 39
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=9.2e-32 Score=264.26 Aligned_cols=347 Identities=17% Similarity=0.185 Sum_probs=253.1
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHH-HHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKE-VGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLW 81 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~ 81 (522)
+.++.+..+.+..++..++..+..+.+|. +.+++|.|+.+.|++.+++.+++.+++++.|+++||+|||+++..+.++.
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 45677888899999999999998888886 57889999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHhh--------hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 82 AAATFLVAFS--------STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 82 ~~~~~~~~~~--------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
+++.+.+.++ .+++.+++.|+++|++.+...+...+++.+++|+++|++++++......+|.++|+.+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 171 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL 171 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 8776665543 25678899999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHH
Q 009914 154 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQ 233 (522)
Q Consensus 154 ~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (522)
.+. .||+..+++.+++.++..+..... |+..+.+ + ++. +.++.. +..++.. ...
T Consensus 172 ~~~-----~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~--~~~----~~~~~~---~~~~~~~-----~~~ 225 (399)
T PRK05122 172 YHW-----GGLAGLGLLIMLLALLGLLLARPR---PAVPPVK----G--ERL----PFRRVL---GRVWPYG-----MGL 225 (399)
T ss_pred HHc-----ccHHHHHHHHHHHHHHHHHHHhcC---CCCCCCC----c--cch----hHHHHH---HHHHHHH-----HHH
Confidence 887 899999888766554433332211 2111110 0 000 111111 1111111 111
Q ss_pred hhhccchhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHH
Q 009914 234 GVTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 313 (522)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (522)
.+..........+.|.|+++.|.+ ..+.......++.+++.++.+++.||+++|+ ...... .+..... ..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~-----~~~~~~-~~~~~~~--~~ 295 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLR-----VAIVSL-LVEILGL--LL 295 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHH-----HHHHHH-HHHHHHH--HH
Confidence 111111223446778888776663 4566677788888999999999999998873 322221 1111111 11
Q ss_pred HHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 314 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
+. . . ++.+...+..++.|++.+...+ .......+..|++.|+++.|+.+....++..++|++.|.+.+. .||
T Consensus 296 ~~-~--~-~~~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~ 367 (399)
T PRK05122 296 LW-L--A-PSPWMALIGAALTGFGFSLVFP-ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-FGY 367 (399)
T ss_pred HH-H--h-ccHHHHHHHHHHHHHhHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCH
Confidence 11 1 1 2233355667788888877766 5667778889999999999999999999999999999999988 565
No 40
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1e-31 Score=263.03 Aligned_cols=355 Identities=16% Similarity=0.153 Sum_probs=270.5
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
++++.+..+....+..........+..|.+.+++|.|+.+.|++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 2 SAKAFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFA 81 (385)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHH
Confidence 45555556666667777788888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++.+++.+....+|..+++.+++.+.+. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-----~ 156 (385)
T TIGR00710 82 LSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW-----L 156 (385)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----c
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887 8
Q ss_pred CchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hh
Q 009914 163 GWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PW 241 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 241 (522)
+||+.|++.+++.++..+..++..++++..+++ + +.++..+..+..++++.++........... .+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (385)
T TIGR00710 157 SWHAIFAFLSLAGILLSALIFFILPETLPYEAR------I-------QISTYFETFLLLLKSKMFWGYALIYGASFGGFF 223 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccc------C-------CHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 999999998888777776665544333221110 0 002223445566777777665544333332 34
Q ss_pred HHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009914 242 SALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 320 (522)
Q Consensus 242 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (522)
....+.|.+++ ++|.++.+.+.+.....++.+++.++.+++.||+++|+ ...... ................ .
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~-~ 296 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKS-----LLRMGL-ILFAVSAVLLEITAIL-G 296 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-----HHHHHH-HHHHHHHHHHHHHHHh-c
Confidence 44556788776 68999999999999999999999999999999999884 222221 1111111111111111 1
Q ss_pred CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHH
Q 009914 321 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGIL 384 (522)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l 384 (522)
...........++.|++.+...+ .......|..| +.++++.++.+.....++.+.+++.+.+
T Consensus 297 ~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 297 LGSWAMIIGPMMFVGIGNSMISS-IAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred cchHHHHHHHHHHHHHHHHHHHH-HHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12233344556667777777777 66777778776 6799999999999887777777776643
No 41
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=2.5e-31 Score=261.27 Aligned_cols=352 Identities=16% Similarity=0.094 Sum_probs=265.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAA 84 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~ 84 (522)
...+..+.+...+..+...++.+.+|.+.+++|.++++.|++.+++.++..++++++|+++||+|||+++..+..+..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG 84 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH
Confidence 33444444445556667778888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCc
Q 009914 85 TFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGW 164 (522)
Q Consensus 85 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw 164 (522)
.+++.++++++.+++.|+++|++.+...+...+++.|+++++++++..+.......+|..++|.+++.+.+. .+|
T Consensus 85 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~g~ 159 (401)
T PRK11043 85 SLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-----FGW 159 (401)
T ss_pred HHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCh
Confidence 999999999999999999999998888888889999999999999999999999999999999999999887 899
Q ss_pred hHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhh-ccchhHH
Q 009914 165 RISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVT-GSFPWSA 243 (522)
Q Consensus 165 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 243 (522)
|+.|++.+++.++..+..++++++++..++ ++.....++.++++.++........ ....+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (401)
T PRK11043 160 QAIFATLFAITLLLILPTLRLKPSKKARKQ-----------------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAW 222 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccc-----------------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH
Confidence 999999988888777666655544321110 0011234455666666543332222 2223445
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCch
Q 009914 244 LSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPST 323 (522)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (522)
..+.|.++++.|++..+.+.......++.++++++.+++.||+++|+ ....... ...+............ ...
T Consensus 223 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~-~~~ 295 (401)
T PRK11043 223 LTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQ-----LLPWLLV-LFAVSVIAIWLASLLS-HPS 295 (401)
T ss_pred HHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH-----HHHHHHH-HHHHHHHHHHHHHHhc-cCc
Confidence 56788888889999999999888888888999999999999998773 2221111 1111111111111111 122
Q ss_pred hHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 324 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
.+.......+.+++.+...+ ...+...+..| ++++++.|+.+.++..++..++.+.|.+.+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 296 LVPLLIPFCVMAAANGAIYP-IVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 33344555667777777777 66666667666 5799999999999998999999999988764
No 42
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=5.2e-32 Score=273.37 Aligned_cols=368 Identities=14% Similarity=0.158 Sum_probs=281.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~ 85 (522)
+.+..++++.++..++.....+.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++++.++.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCch
Q 009914 86 FLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWR 165 (522)
Q Consensus 86 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~ 165 (522)
++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++++.+. .+||
T Consensus 82 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-----~~w~ 156 (485)
T TIGR00711 82 LLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN-----YHWR 156 (485)
T ss_pred HHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC-----cCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887 8999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCc----------------ccccchhhhhhHH---------------H
Q 009914 166 ISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSD----------------QVSSKSFRSDVKV---------------L 214 (522)
Q Consensus 166 ~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~---------------~ 214 (522)
+.|++.+.+.++..++..+..+++++...++.+.. .+.++..+.+... .
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (485)
T TIGR00711 157 WIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFV 236 (485)
T ss_pred ehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99999888877776666554433222111110000 0000000000000 0
Q ss_pred HHH--------hhhhhcchhHHHHHHHhhhccc-hhHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhh
Q 009914 215 IQE--------AKSVIKIPSFQIIVAQGVTGSF-PWSALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGD 284 (522)
Q Consensus 215 ~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 284 (522)
.++ ..+.++++.++......+.... .+....++|.|+++ +|+++.+++.......++.+++.++.|++.|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~ 316 (485)
T TIGR00711 237 VWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGD 316 (485)
T ss_pred HHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 1235667766665444443333 45556778999975 8999999999999999999999999999999
Q ss_pred HhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHH
Q 009914 285 FLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYA 364 (522)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (522)
|+++|+ ...... .+. .+....+..........+......++.|++.+...+ .......+..|+++++++.|
T Consensus 317 r~~~~~-----~~~~g~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~-~~~~~~~~~~~~~~~g~~~~ 387 (485)
T TIGR00711 317 KIDPRK-----LVTIGL-ILY--AVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFM-PLTTIALSGLPPHKIARGSS 387 (485)
T ss_pred hcCcHH-----HHHHHH-HHH--HHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHhHHHH
Confidence 999883 222211 111 111111111111222333344557778888877665 46677778889999999999
Q ss_pred HHHHHHHHHhchhhHHHHHHHHH
Q 009914 365 MDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 365 ~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
+.+....+|+.+|+.+.|.+.++
T Consensus 388 ~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 388 LSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999886
No 43
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=4.2e-31 Score=258.80 Aligned_cols=345 Identities=16% Similarity=0.173 Sum_probs=247.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHH-HHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKE-VGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
.+.+..+.++.++..+...+..+.+|. +.+++|.|++++|++.+++.+++.++++++|+++||+|||++++.+.+...+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGL 93 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHH
Confidence 345666777777888877888888886 5789999999999999999999999999999999999999999998887776
Q ss_pred HHHHHHh--------hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009914 84 ATFLVAF--------SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP 155 (522)
Q Consensus 84 ~~~~~~~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~ 155 (522)
+.+.+.. .++++.+++.|+++|++.+...+...+++.+++|+++|++++++.+.+..+|.++||++++.+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~ 173 (392)
T PRK12382 94 AGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS 173 (392)
T ss_pred HHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 5543321 35788999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhh
Q 009914 156 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGV 235 (522)
Q Consensus 156 ~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (522)
. .||+..+.+..+..++........++++ +++ ++ +. +.++.. +..++ +.+...+
T Consensus 174 ~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~--~~----~~~~~~---~~~~~-~~~~~~l---- 227 (392)
T PRK12382 174 H-----FGFAALALTTMVLPLLAWAFNGTVRKVP---AHA----GE--RP----SLWSVV---GLIWK-PGLGLAL---- 227 (392)
T ss_pred c-----cChHHHHHHHHHHHHHHHHHHHhccCCC---CCc----cc--Cc----hHHHHH---HHHHH-hHHHHHH----
Confidence 7 8999887766554433332222122111 110 00 00 111111 11111 1111111
Q ss_pred hccchhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHH
Q 009914 236 TGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL 315 (522)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (522)
..........+.|.|+++.|++. .+.......++.++++++.|++.||+++|+ ....... +.... .....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-----~~~~~~~-~~~~~--~~~~~ 297 (392)
T PRK12382 228 QGVGFAVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVK-----VAIVSLL-VETVG--LLLLW 297 (392)
T ss_pred HHHHHhHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-----ehHHHHH-HHHHH--HHHHH
Confidence 11112334567788887777654 456666677888899999999999999875 2222211 11111 11111
Q ss_pred hCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 316 VLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
. .+ +.+......++.|++.+...+ ...+.+.+..|+++||++.|+.+....++..++|.+.|++.|. .||
T Consensus 298 -~--~~-~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-~g~ 367 (392)
T PRK12382 298 -L--AP-TAWVALAGAALTGAGCSLIFP-ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS-FGY 367 (392)
T ss_pred -H--cc-cHHHHHHHHHHHHHHHHhHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCc
Confidence 1 12 233345566777888777666 6677888999999999999999999999999999999999998 676
No 44
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-32 Score=247.78 Aligned_cols=359 Identities=18% Similarity=0.142 Sum_probs=286.2
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHH
Q 009914 2 KQETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLW 81 (522)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~ 81 (522)
+.+++.+.+..++..+.+....+++++.+.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.++.
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~ 89 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLL 89 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHH
Confidence 34567888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh---hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009914 82 AAATFLVAFSS---TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTF 158 (522)
Q Consensus 82 ~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~ 158 (522)
.+-++..+++. +++++++.+++.|++ |..+....++++.++||+++|.++|+.. ..++|..+..+++..+...
T Consensus 90 ~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~-- 165 (417)
T COG2223 90 LIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA-- 165 (417)
T ss_pred HHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH--
Confidence 99999988875 456999999999998 6677788899999999999999999999 9999999999999988877
Q ss_pred cCCCC---chHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHH-HHhhhhhcchhHHHHHHHh
Q 009914 159 MGIPG---WRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLI-QEAKSVIKIPSFQIIVAQG 234 (522)
Q Consensus 159 ~~~~g---w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 234 (522)
.+ |+.+..+..+..++..++.++..+|.+..+... ++.. .+.+.+++++..|.+.+..
T Consensus 166 ---~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~---------------~~~~~~~~~~v~~~~~~W~lsllY 227 (417)
T COG2223 166 ---FGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV---------------KPQLPAQLKAVFSNKDTWLLSLLY 227 (417)
T ss_pred ---HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc---------------cccchhHHHHHhcCcchHHHHHHH
Confidence 67 999999999988888888888766643321111 1111 4455667777777776666
Q ss_pred hhccch-hHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHH
Q 009914 235 VTGSFP-WSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 312 (522)
Q Consensus 235 ~~~~~~-~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (522)
+..+.. -+...++|.|++ ++|.+..++|.+.+...+.+.+.+.++|+++||+|.++ .+.......... ....
T Consensus 228 ~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~r-----v~~~~f~~~~~~-~~~l 301 (417)
T COG2223 228 FATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRR-----VTLAVFVGMALA-AALL 301 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchh-----HHHHHHHHHHHH-HHHH
Confidence 555554 455678999997 69999999999999999999999999999999999884 333322222211 1111
Q ss_pred HHHhCCCC--CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 313 LLLVLPDD--PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 313 ~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
. ...+.. ..+.+.....++..+++.+..+. ..+.++..++| ++.|.+.|+...++.+|+..-|...|...+.+..
T Consensus 302 ~-~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnG-svfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~ 378 (417)
T COG2223 302 S-LFLTGFGHGGSFVVFVAVFLALFVFAGLGNG-SVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS 378 (417)
T ss_pred H-ccccccccCcchHHHHHHHHHHHHHhccCcc-hheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhccc
Confidence 1 111111 13344455556666777777666 67788888886 5789999999999999999999999999999543
Q ss_pred c
Q 009914 391 F 391 (522)
Q Consensus 391 ~ 391 (522)
+
T Consensus 379 ~ 379 (417)
T COG2223 379 Y 379 (417)
T ss_pred H
Confidence 3
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.1e-30 Score=256.23 Aligned_cols=348 Identities=13% Similarity=0.081 Sum_probs=256.4
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh
Q 009914 12 NLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS 91 (522)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~ 91 (522)
.+..+...+......+.+|.+.++++.+..+.++..+++.+++.++++++|+++||+|||++++.+.++++++.+++.++
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 101 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT 101 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc
Confidence 44445566677788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHH
Q 009914 92 STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIV 171 (522)
Q Consensus 92 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~ 171 (522)
++++.++++|+++|++.+...+...+++.|++|+++|++++++......+|..+||++++.+.+. .|||+.|++.
T Consensus 102 ~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-----~gw~~~f~~~ 176 (413)
T PRK15403 102 TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-----VHWKVLFAII 176 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCHHHHHHHH
Confidence 99999999999999998877777788999999999999999999999999999999999999876 7999999999
Q ss_pred HHHHHHHHHhhhh-ccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHHHHH
Q 009914 172 GLISVVVGTLVRL-FANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSFAAM 249 (522)
Q Consensus 172 ~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 249 (522)
+++.++..+..++ +|++++. ++ +.. +.+...++++..+++|.++........... .+....+.|.
T Consensus 177 ~~~~~i~~~~~~~~lp~~~~~-~~-----~~~-------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~ 243 (413)
T PRK15403 177 AVMGLIAFVGLLLAMPETVKR-GA-----VPF-------SAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPV 243 (413)
T ss_pred HHHHHHHHHHHHHhCCCCccc-cC-----CCC-------ChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 9888777665444 4433221 10 000 013344566778899998876665444443 3444566788
Q ss_pred HHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHH-HHHHHHHHHHHHHHHhCCCCCchhHHH
Q 009914 250 WLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQ-ISSLSAIPLAALLLLVLPDDPSTPVMH 327 (522)
Q Consensus 250 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (522)
++++ +|+++.+.++.......+.+++..+.+++.++..+++ ..... .....+..+........ .+.++..
T Consensus 244 ~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~-----~~~~~~~~~~ig~~l~~~~~~~~---~~~~~~~ 315 (413)
T PRK15403 244 ILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR-----FIWRAVPIQLVGLALLIVGNLLW---PHVWLWS 315 (413)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh-----HHHHHHHHHHHHHHHHHHHHHHc---cccHHHH
Confidence 8875 6999999999988888888887777777654433321 21111 11111111111111111 2223324
Q ss_pred HHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 328 GLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 328 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
....++.+++.+...+ ....... .-.+..+|++.|+.+.....+..+++...|++.+.
T Consensus 316 ~~~~~l~~~G~~~~~p-~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 316 VLGTSLYAFGIGLIFP-TLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHHHHHHHHHHHHhH-HHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4566667777776666 4443222 11233579999999999999999999999988776
No 46
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=1.1e-30 Score=255.24 Aligned_cols=347 Identities=12% Similarity=0.070 Sum_probs=254.1
Q ss_pred HHHHHHHHHHHHHhhhhhhHHH-HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 009914 9 VLVNLAGIMERADESLLPGVYK-EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFL 87 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~ 87 (522)
.++....++.........+.++ ++.+++|+|+.++|++.+...+...+.+++.|+++||+|||+++..+.++.+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 4455666666666666555555 567899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHH
Q 009914 88 VAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRIS 167 (522)
Q Consensus 88 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~ 167 (522)
+.+.++++.+++.|+++|++.+...+...+++.+++|+++|++++++.....++|..+||.+++.+. . .+||+.
T Consensus 93 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~-----~g~~~~ 166 (400)
T PRK11646 93 MAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q-----YDFRLV 166 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-----hhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 4 799999
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHH
Q 009914 168 FHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSF 246 (522)
Q Consensus 168 f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 246 (522)
|++.++..++..++..+..++++.. +. + ++..+..+..+++|.++......+.... ......+
T Consensus 167 f~~~~~~~~~~~i~~~~~~~~~~~~--~~-------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (400)
T PRK11646 167 CATGAVLFVLAAAFNAWLLPAYKLS--TV-------R-------TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLM 230 (400)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccc--cc-------c-------hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHh
Confidence 9998887776655544433322110 00 0 0111234456677776654433322222 2233457
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhH-hhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhH
Q 009914 247 AAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF-LSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 325 (522)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (522)
.|.|+++.+.++.+.+.+.+...+....+....+++.|| ++.++ ..... ..+.++ .... ... .++ .+
T Consensus 231 ~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~~-~~~~~~--~~~~-l~~--~~~-~~ 298 (400)
T PRK11646 231 LPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH-----RLMAG-LLIMSL--SMFP-IGM--VSN-LQ 298 (400)
T ss_pred hhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH-----HHHHH-HHHHHH--HHHH-HHH--hhh-HH
Confidence 899988766677888888888777666555555555554 43331 22111 111111 1111 111 122 23
Q ss_pred HHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 326 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 326 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
.......+.+++.+...+ ...+++.+..|++++|+++|+.+....++..+||.+.|++.|...+
T Consensus 299 ~~~~~~~l~~~g~~~~~p-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~ 362 (400)
T PRK11646 299 QLFTLICLFYIGSIIAEP-ARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKA 362 (400)
T ss_pred HHHHHHHHHHHHHHHHHc-cHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhh
Confidence 233445566677666666 6789999999999999999999999999999999999999998543
No 47
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.7e-31 Score=264.87 Aligned_cols=371 Identities=16% Similarity=0.147 Sum_probs=260.7
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
++..+..+.+.+...+.....+....|.+.+ +|.++++.|++.+++.++..++.++.|+++||+|||+++..+.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 3555666667777777777777788888876 599999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh----hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc-ccc
Q 009914 84 ATFLVAFS----STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP-MTF 158 (522)
Q Consensus 84 ~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~-~~~ 158 (522)
+.+++++. ++++.+.+.|++.|++.+...+.....+.|++|+++|++++++.+.+.++|..+++.+.+.... .
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~-- 181 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF-- 181 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh--
Confidence 88887764 4677788999999999999999899999999999999999999999999999999887765443 3
Q ss_pred cCCCCchHHHHHHHHHHHHHHHhhhhccCC-CCCCCCCC----CCCc-cc--ccchhhhhhHHHHHHhhhhhcchhHHHH
Q 009914 159 MGIPGWRISFHIVGLISVVVGTLVRLFAND-PHFPDGGT----ANSD-QV--SSKSFRSDVKVLIQEAKSVIKIPSFQII 230 (522)
Q Consensus 159 ~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~-~~~~~~~~----~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (522)
.+||..|++.++++++..++.+++.++ |+....++ +.+. .+ ++.+...+.++.. .+..++++.++..
T Consensus 182 ---~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 256 (438)
T TIGR00712 182 ---NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIF--MQYVLPNKLLWYI 256 (438)
T ss_pred ---hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHH--HHHHccCchHHHH
Confidence 689999999988888776655554433 32211000 0000 00 0000000111111 1246788877776
Q ss_pred HHHhhhccc-hhHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHH
Q 009914 231 VAQGVTGSF-PWSALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 308 (522)
Q Consensus 231 ~~~~~~~~~-~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (522)
....++... .++..++.|.|+++ .|+++.++++...+..+++++++++.|++.||+++++. .......... ..
T Consensus 257 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~----~~~~~~~~~~-~~ 331 (438)
T TIGR00712 257 AIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNR----GATGVFFMTL-VT 331 (438)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc----cHHHHHHHHH-HH
Confidence 554444333 45667889999975 79999999999999999999999999999999965432 2211111111 11
Q ss_pred HHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHh-chhhHHHHHHHHH
Q 009914 309 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILS-SFAPPVVGILAQH 387 (522)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~i~~~~~g~l~~~ 387 (522)
.....+. .....+ .+......+..|++...... .......|.+|++.|+++.|+.+...++++ +++|.+.|.+.|+
T Consensus 332 ~~~~~~~-~~~~~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~ 408 (438)
T TIGR00712 332 IAVIVYW-MNPAGN-PLVDMICMIVIGFLIYGPVM-LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF 408 (438)
T ss_pred HHHHHHH-hcCCCc-hHHHHHHHHHHHHHHccHHH-HHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHh
Confidence 1111111 111112 22223334444543322212 123457789999999999999999988875 6899999999998
Q ss_pred hhCc
Q 009914 388 VYGF 391 (522)
Q Consensus 388 ~~g~ 391 (522)
.||
T Consensus 409 -~g~ 411 (438)
T TIGR00712 409 -FGW 411 (438)
T ss_pred -ccc
Confidence 565
No 48
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=4e-32 Score=267.18 Aligned_cols=363 Identities=21% Similarity=0.231 Sum_probs=268.8
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
+++.+....+..+..+++.....+..|.+.+++|.++.+.|++.+...++..++.++.|+++||+|||+.+..+.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 94 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHH
Confidence 44566666777778888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC
Q 009914 84 ATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG 163 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g 163 (522)
+.+++.+.++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+. .+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~g 169 (398)
T TIGR00895 95 FTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV-----FG 169 (398)
T ss_pred HHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc-----cc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999887 89
Q ss_pred chHHHHHHHHHHHHHHHhhhh-ccCCCCCCCCCCCCC------------------cccccchhhhhhHHHHHHhhhhhcc
Q 009914 164 WRISFHIVGLISVVVGTLVRL-FANDPHFPDGGTANS------------------DQVSSKSFRSDVKVLIQEAKSVIKI 224 (522)
Q Consensus 164 w~~~f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (522)
|+..|++.+++.++..++.+. +++.++....+++++ ...+.+...+..++..+..+...+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (398)
T TIGR00895 170 WRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTA 249 (398)
T ss_pred ceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhH
Confidence 999999987666665555544 443332111110000 0000000000111111111111112
Q ss_pred hhHHHHHHHhhhc-cchhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHH
Q 009914 225 PSFQIIVAQGVTG-SFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISS 303 (522)
Q Consensus 225 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 303 (522)
+..+.+....+.. ...+....+.|.+.++.|++..+.+.......++.+++.++.+++.||+++|+ ......
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~-- 322 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV-----TALLLL-- 322 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH-----HHHHHH--
Confidence 2222222222222 22344556788777789999999999999999999999999999999998872 222211
Q ss_pred HHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHH
Q 009914 304 LSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGI 383 (522)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~ 383 (522)
+..+. ...... . ..+........++.|++.+...+ ...+++.|.+|++.|+++.|+.+.+..++..++|.+.|+
T Consensus 323 ~~~~~-~~~~~~-~---~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 323 LGAVF-AVLVGS-T---LFSPTLLLLLGAIAGFFVNGGQS-GLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHHH-HHHHHH-H---hhCHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 11111 111111 1 12233355667778888887777 788999999999999999999999999999999999987
Q ss_pred H
Q 009914 384 L 384 (522)
Q Consensus 384 l 384 (522)
+
T Consensus 397 l 397 (398)
T TIGR00895 397 L 397 (398)
T ss_pred c
Confidence 5
No 49
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1e-31 Score=271.08 Aligned_cols=370 Identities=15% Similarity=0.142 Sum_probs=254.9
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhcCCC--------hhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHH
Q 009914 10 LVNLAGIMERADESLLPGVYKEVGAALHTD--------PTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLW 81 (522)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s--------~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~ 81 (522)
++.++.+...++.....+..|.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||++++++.++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~ 111 (481)
T TIGR00879 32 IAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLF 111 (481)
T ss_pred HHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHH
Confidence 334445566677778888889888888877 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh---hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHH---Hhhhc
Q 009914 82 AAATFLVAFSS---TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFS---VVMAP 155 (522)
Q Consensus 82 ~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~---~~l~~ 155 (522)
.++.+++.+.. +++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.++ .....
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 191 (481)
T TIGR00879 112 VIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNN 191 (481)
T ss_pred HHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99988886543 4568999999999999999999999999999999999999999999999999999998 55545
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCc-----------ccccchhhh---hhHH--------
Q 009914 156 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSD-----------QVSSKSFRS---DVKV-------- 213 (522)
Q Consensus 156 ~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~---~~~~-------- 213 (522)
. .+||+.|++.++..++..+..++++++|+....+++.++ ........+ ....
T Consensus 192 ~-----~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (481)
T TIGR00879 192 T-----LGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRS 266 (481)
T ss_pred C-----ccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 5 799999999777666666555566655432111111000 000000000 0000
Q ss_pred ---HHHHhhhhhc---chhHHHHHHHhhhccc-hhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHh
Q 009914 214 ---LIQEAKSVIK---IPSFQIIVAQGVTGSF-PWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL 286 (522)
Q Consensus 214 ---~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 286 (522)
.........+ .+.++......+.... ......+.|.++++.|++..+.+.......++.+++.++.+++.||+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 346 (481)
T TIGR00879 267 VQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF 346 (481)
T ss_pred ccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0011111111 2223333333222222 23344567888888999998889999999999999999999999999
Q ss_pred hhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCc-----hhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHH
Q 009914 287 SARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS-----TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTS 361 (522)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (522)
++|+ ..... ..+.......+.......... ... ......+.+.+.+....+....+..|.+|++.|++
T Consensus 347 ~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 419 (481)
T TIGR00879 347 GRRP-----LLLIG-AAGMAICLFVLGILGASFVTGSSKSSGNV-AIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPK 419 (481)
T ss_pred cchH-----HHHHH-HHHHHHHHHHHHHHhhcccCCcccchhHH-HHHHHHHHHHHHHccccCeehhhhhccCChHHHHH
Confidence 9884 32222 111111111111111111111 222 22222233333333222256778899999999999
Q ss_pred HHHHHHHHHHHHhchhhHHHHHHHHHhhCcc
Q 009914 362 VYAMDRSFESILSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 362 ~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~ 392 (522)
+.|+.+...+++++++|.+.|.+.+. .++.
T Consensus 420 ~~~~~~~~~~lg~~i~~~~~~~~~~~-~~~~ 449 (481)
T TIGR00879 420 GISIAVAANWLANFIVGFLFPTMLES-IGVG 449 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCcc
Confidence 99999999999999999999999988 5653
No 50
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=2.4e-30 Score=252.22 Aligned_cols=347 Identities=14% Similarity=0.111 Sum_probs=255.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFL 87 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~ 87 (522)
+..++++.++..++........+.+.++++.++.+.+++.+.+.+++.+..+++|+++||+|||++++++.++.+++.++
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~ 84 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH
Confidence 44567888888887777777777788999999999999999999999999999999999999999999999999998888
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHH
Q 009914 88 VAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRIS 167 (522)
Q Consensus 88 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~ 167 (522)
+.+..+. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++||.+++++.+. .|+..
T Consensus 85 ~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~------~~~~~ 155 (393)
T PRK11195 85 MLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP------HAEAA 155 (393)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHH
Confidence 7776664 77899999999999999999999999999999999999999999999999999999875 48888
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHH
Q 009914 168 FHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSF 246 (522)
Q Consensus 168 f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 246 (522)
+.+.+...++..+....+++++++.+..+ .+.. ...++..+..+.++++|.+............ .......
T Consensus 156 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (393)
T PRK11195 156 LAVCALIYLLAALFNLFIPRLGARRPGQS-----WNPI---ALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFL 227 (393)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccccccC-----CCHH---HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHH
Confidence 87776655544444444444332111100 0000 1112333445566777776554433322222 2233345
Q ss_pred HHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhH
Q 009914 247 AAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 325 (522)
Q Consensus 247 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (522)
.|.|++ .+|.++.+.|.+....+++.++++++.+++.||.++++ ..... ..++.. ...+ .. .++.+
T Consensus 228 ~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~-----~~~~g--~~~~~~--~~~~-~~---~~~~~ 294 (393)
T PRK11195 228 VLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR-----VLPAG--ILMGLV--VLLM-AL---QHSLL 294 (393)
T ss_pred HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-----hHHHH--HHHHHH--HHHH-HH---HhHHH
Confidence 667776 48999999999999999999999999999999877663 22221 111111 1111 11 12333
Q ss_pred HHHHHHHHHHHHHhccCCCcchhhhhhhcCcch-hHHHHHHHHHHHHHHhchhhHHHHHHH
Q 009914 326 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKS-RTSVYAMDRSFESILSSFAPPVVGILA 385 (522)
Q Consensus 326 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~i~~~~~g~l~ 385 (522)
......++.|++.+...+ ...+.+++..|++. +|++.|+.+...+++..++..+.+.+.
T Consensus 295 ~~~~~~~~~G~~~g~~~~-~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 295 PAYPLLILIGALGGFFVV-PMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHHHHHHHHHHhhhhhhh-hHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 345566678888877776 67788888766554 799999999999999999999988664
No 51
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=4.1e-31 Score=266.44 Aligned_cols=375 Identities=12% Similarity=0.051 Sum_probs=253.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhc-----CCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAAL-----HTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGA 78 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~ 78 (522)
+++.+.++.++.+..+++....+...|.+..++ +.+..+.+++.+...++..++++++|+++||+|||+++.++.
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 456677888899999999999999999887652 345667899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhh------HHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 009914 79 FLWAAATFLVAFSST------FAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVV 152 (522)
Q Consensus 79 ~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 152 (522)
++..++.++++++++ ++.++++|+++|++.+...+....++.|++|+++|++++++.+....+|.++++.++..
T Consensus 94 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~ 173 (502)
T TIGR00887 94 IIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALI 173 (502)
T ss_pred HHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888765 78899999999999999999999999999999999999999999999999999998876
Q ss_pred hhcccc------------------cCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCc-------------c
Q 009914 153 MAPMTF------------------MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSD-------------Q 201 (522)
Q Consensus 153 l~~~~~------------------~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-------------~ 201 (522)
+..... ....+||++|.+.++..++..+..+++||+|++...++++++ .
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~ 253 (502)
T TIGR00887 174 VLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKI 253 (502)
T ss_pred HHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcccc
Confidence 542100 011479999999888888777777778888876322111100 0
Q ss_pred cccchhhh----hhHHHHHHhhhhhc----chhHHH---HH-HHhhhccchhHHHHHHHHHHHHhCCChhHHHH------
Q 009914 202 VSSKSFRS----DVKVLIQEAKSVIK----IPSFQI---IV-AQGVTGSFPWSALSFAAMWLELTGFSHEKTAF------ 263 (522)
Q Consensus 202 ~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------ 263 (522)
+++....+ +.++....++++++ ++.... +. .........++...+.|.++++.|++....+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~ 333 (502)
T TIGR00887 254 EAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEEL 333 (502)
T ss_pred ccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHH
Confidence 00000000 00000012223322 111111 11 11111122345556788888888886542211
Q ss_pred ------HHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHH
Q 009914 264 ------LMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLF 337 (522)
Q Consensus 264 ------~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 337 (522)
...+..++.+++.++.+++.||+|||+ .++... .+..+....+...... ...... .....+...++
T Consensus 334 ~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~-----~l~~~~-~~~~~~~~~l~~~~~~-~~~~~~-~~~~~~~~~~~ 405 (502)
T TIGR00887 334 YKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKP-----IQLMGF-FILTVLFFVLGFAYNH-LSTHGF-LAIYVLAQFFA 405 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh-----HHHHHH-HHHHHHHHHHHHHHHh-cchhHH-HHHHHHHHHHH
Confidence 223344566778889999999999984 332221 1111111111111100 011111 11111112222
Q ss_pred HhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 338 ISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
.....+ ..+.+..|.+|++.|+++.|+.+.++.++++++|.+.+.+.+.
T Consensus 406 ~~~~~~-~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 406 NFGPNA-TTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQH 454 (502)
T ss_pred hcCCCc-hhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcc
Confidence 222333 5677889999999999999999999999999999999999885
No 52
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=2.1e-30 Score=255.68 Aligned_cols=353 Identities=17% Similarity=0.197 Sum_probs=260.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhh-----hHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTG-----LGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAF 79 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~ 79 (522)
.+.+..++++.++..+......+.+|.+.+++|.+..+ .|++.+++.++..++++++|+++||+|||+++..+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 34566777888888888888999999999999998654 4889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009914 80 LWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFM 159 (522)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~ 159 (522)
+.+++.+++.+.++++.+++.|++.|++.+ ..+...+++.+++|+++|++++++......+|.+++|.+++.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~--- 168 (408)
T PRK09874 93 GMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS--- 168 (408)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 999999999899999999999999999855 5677788999999999999999999999999999999999999887
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHH-HHHhhhcc
Q 009914 160 GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQII-VAQGVTGS 238 (522)
Q Consensus 160 ~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 238 (522)
.+||+.|++.+++.++..+..+++.++++.+.+++ +. . ..++..+.++++.++.. ....+...
T Consensus 169 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (408)
T PRK09874 169 --YGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK-------EM------L-HMREVVTSLKNPKLVLSLFVTTLIIQ 232 (408)
T ss_pred --hCHHHHHHHHHHHHHHHHHHHHHHhccCcccccch-------hh------h-HHHHHHHhCcCCchHHHHHHHHHHHH
Confidence 79999999999887777766666554432211110 00 0 01112233455554432 22222222
Q ss_pred c-hhHHHHHHHHHHHHhCCChh----HHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHH
Q 009914 239 F-PWSALSFAAMWLELTGFSHE----KTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 313 (522)
Q Consensus 239 ~-~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (522)
. ......+.+.|..+.+.+.. ..+.+..+.+++.+++.+..|++.||+++|+ .+..... .... ..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~-----~~~~~~~-~~~~--~~~~ 304 (408)
T PRK09874 233 VATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK-----ILITALI-FSVL--LLIP 304 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch-----hHHHHHH-HHHH--HHHH
Confidence 2 22334567777765433322 2455566677888888999999999999884 3222211 1111 1111
Q ss_pred HHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 314 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
.... +..+...+..++.|++.+...+ ...+.+.+..|++.+|+.+++.+....++..++|.+.|.+.+. .||
T Consensus 305 -~~~~---~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~-~g~ 376 (408)
T PRK09874 305 -MSFV---QTPLQLGILRFLLGAADGALLP-AVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN-YGF 376 (408)
T ss_pred -HHHh---ccHHHHHHHHHHHHhhhHhhHH-HHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh-cch
Confidence 1111 2233355566777888887777 6778888889999999999999999999999999999999988 565
No 53
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=4.1e-30 Score=252.04 Aligned_cols=354 Identities=14% Similarity=0.131 Sum_probs=266.3
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
+.++.+....+..++..+......+.+|.+.+++|.|+.+.+++.+++.++..++++++|+++||+|||+++.++..+..
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~ 84 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFI 84 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHH
Confidence 34566666677777777777888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
++.+++.+.++++.+++.|++.|++.+...+....+..|.++++++++++++...+..+|..++|.+++.+.+. .
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~ 159 (394)
T PRK11652 85 LGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL-----F 159 (394)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----c
Confidence 99999999999999999999999999988888889999999999999999999999999999999999999877 7
Q ss_pred CchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hh
Q 009914 163 GWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PW 241 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 241 (522)
+||+.|++.++..++..++..+..++++..+++ + .+..+..+..+++|.++..+...+.... ..
T Consensus 160 g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (394)
T PRK11652 160 GWRACYLFLLLLGAGVTFSMARWMPETRPADAR--------R-------TRVLASYRTLLSNRRFNCYLLMLIGTLAGIA 224 (394)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCccCccccc--------h-------hHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 999999998887776655544433332111100 0 1123445556777776654443332222 22
Q ss_pred HHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009914 242 SALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 320 (522)
Q Consensus 242 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (522)
....+.+.++++ +|++..+.+++.....++.+++..+.+++.||++++ .............. ........
T Consensus 225 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~- 295 (394)
T PRK11652 225 VFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL------MWQSVICCLLAGLL--MWIPGWFG- 295 (394)
T ss_pred HHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH--HHHHHHhc-
Confidence 233456677765 899999999998888888888999999999988743 22221111111111 11111111
Q ss_pred CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 321 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
....+......++.+++.+...+ ...+...+..| +++++..++.+....+++.+++.+.|.+.+.
T Consensus 296 ~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 296 VMNVWTLLVPAALFFFGAGMLFP-LATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred cccHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 12233345566777888887777 77888888887 5789999999999999999999988877554
No 54
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=1.5e-30 Score=253.83 Aligned_cols=351 Identities=11% Similarity=0.104 Sum_probs=258.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHH-HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYK-EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
++.+..+.+..++.........+.+| ++.+++|+|..++|++.+++.++..+++++.|+++||+|||+++.++.++.++
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~ 85 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFAS 85 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHH
Confidence 44566666777777777777666655 56678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC
Q 009914 84 ATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG 163 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g 163 (522)
+.++++++++++.++++|++.|.+.+...+...++..|..|+++|++++++.....++|.++||++++++.. .+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~------~g 159 (395)
T PRK10054 86 GFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM------QS 159 (395)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hc
Confidence 999999999999999999999988888888899999999999999999999999999999999999998874 58
Q ss_pred chHHHHHHHHHHHHHHHhhhh-ccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchh-
Q 009914 164 WRISFHIVGLISVVVGTLVRL-FANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPW- 241 (522)
Q Consensus 164 w~~~f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 241 (522)
|+.+|++.+++.++..++..+ ++++++.++ ++ + + +. .+.++.+++|.++......++....+
T Consensus 160 ~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~-~~---~----~-------~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 223 (395)
T PRK10054 160 INLPFWLAAICSAFPLVFIQIWVQRSEKAIA-TE---T----G-------SV-WSPSVLLQDKALLWFTCSGFLASFVSG 223 (395)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhccccccc-cc---h----h-------hh-hhhhhhccCceehHHHHHHHHHHHHHH
Confidence 999999988877776555544 333322111 00 0 0 00 11245677777766554444433322
Q ss_pred HHHHHHHHHHH---HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCC
Q 009914 242 SALSFAAMWLE---LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP 318 (522)
Q Consensus 242 ~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (522)
....+.+.|+. +.+.+....+.+.....+..+......+++.||.++|+ .+.... .+... ....+ ...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~l~~~~-~~~~~--~~~~~-~~~ 294 (395)
T PRK10054 224 AFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRP-----LMTAGT-LCFVI--GLVGF-IFS 294 (395)
T ss_pred HhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchh-----HHHHHH-HHHHH--HHHHH-HHc
Confidence 23345565553 34566677788888887777777888899999988773 222111 11111 11111 111
Q ss_pred CCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 319 DDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 319 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
.++.+...+...+.+++.+...| ...+.+.+..|++.++++.+..+ ...+|..+||.++|.+.|+ .|+
T Consensus 295 --~~~~~~~~~~~~~~~~g~~~~~p-~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~-~g~ 362 (395)
T PRK10054 295 --GNSLLLWGMSAAVFTVGEIIYAP-GEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT-LPP 362 (395)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH-cCh
Confidence 12333344566777888777667 67788999999999999998765 6678999999999999999 564
No 55
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=1.3e-29 Score=248.33 Aligned_cols=347 Identities=16% Similarity=0.102 Sum_probs=245.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH
Q 009914 7 TLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~ 86 (522)
.+....+..+..........+.+|.+.+++|.|..+.+++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~ 83 (392)
T PRK10473 4 FLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHH
Confidence 34445555566666666777889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchH
Q 009914 87 LVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRI 166 (522)
Q Consensus 87 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~ 166 (522)
++.++++++.+++.|+++|++.+...+...+++.|++|+++|++.+++.+....+|..++|.+++.+.+. .+|++
T Consensus 84 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~-----~g~~~ 158 (392)
T PRK10473 84 LCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK-----FPWQS 158 (392)
T ss_pred HHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----cChHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988776 79999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhc-cchhHHHH
Q 009914 167 SFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTG-SFPWSALS 245 (522)
Q Consensus 167 ~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 245 (522)
.|++.+++.++..++..+..++++..+++ ++ . ...+..++.++++.++......... ........
T Consensus 159 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (392)
T PRK10473 159 LFYTMAAMGILVLLLSLFILKETRPARAP---AA----S-------SKPRENSESLLNRFFLSRLVITTLSVTVILTFVN 224 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccC---Cc----c-------chHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888877776665544433211110 00 0 0112223445666655433332222 22233445
Q ss_pred HHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 009914 246 FAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 324 (522)
Q Consensus 246 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (522)
+.|.+++ ++|++..+.+.+.+..+++.+++.++.+++.||+++|+ ....... +.... ...+... . ...
T Consensus 225 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~-----~~~~~~~-~~~~~--~~~~~~~-~-~~~- 293 (392)
T PRK10473 225 TSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRT-----LMLTSQV-LFLAA--GITLALS-P-SHA- 293 (392)
T ss_pred hCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-----HHHHHHH-HHHHH--HHHHHHH-H-HHH-
Confidence 5677765 68999999999999999999999999999999999883 3222211 11111 1111111 1 111
Q ss_pred HHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 325 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
.......+.+.+.+...+ .....+..|.++++ |..+....++..+++.+.+++.+. .|+
T Consensus 294 -~~~~~~~l~~~g~~~~~~---~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~-~g~ 352 (392)
T PRK10473 294 -VSLFGITLICAGFSVGFG---VAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAV-LGI 352 (392)
T ss_pred -HHHHHHHHHHHHHHHHhH---HHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHH-hcc
Confidence 122333333333333333 23334455544443 444455567778888888888887 564
No 56
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=9.6e-30 Score=250.68 Aligned_cols=357 Identities=13% Similarity=0.101 Sum_probs=259.3
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
....+..+.+.+++.++......+..|.+++++|.|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+..++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 34556778888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc-c-
Q 009914 84 ATFLV---AFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT-F- 158 (522)
Q Consensus 84 ~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~-~- 158 (522)
+.+++ .++++++.++++|+++|++.+...+..++++.++.++++|.+.+++.+....+|..+|+.+++.+.... .
T Consensus 104 ~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~ 183 (438)
T PRK10133 104 GAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPH 183 (438)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99875 467899999999999999999999999999999877777777899999999999999999987654110 0
Q ss_pred -----------cC--------CCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhh
Q 009914 159 -----------MG--------IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAK 219 (522)
Q Consensus 159 -----------~~--------~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (522)
.. ..+||++|+....+..+..++..+ .+.|+.+.++.+ +++. .+..+..+
T Consensus 184 ~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~-~~~p~~~~~~~~---~~~~-------~~~~~~~~ 252 (438)
T PRK10133 184 QSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIML-TKFPALQSDNHS---DAKQ-------GSFSASLS 252 (438)
T ss_pred cchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCCccccc---cccc-------cchhhhHH
Confidence 00 025677776544333322222222 111211111100 0000 11223345
Q ss_pred hhhcchhHHHHHHHhhhccc-hhHHHHHHHHHH-H-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhH
Q 009914 220 SVIKIPSFQIIVAQGVTGSF-PWSALSFAAMWL-E-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRI 296 (522)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~ 296 (522)
+++++|.++...+..++... .+....|.+.|+ + .+|+++.++++......++.++++++.+++.||+++|+ .
T Consensus 253 ~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~-----~ 327 (438)
T PRK10133 253 RLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK-----V 327 (438)
T ss_pred HHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH-----H
Confidence 66778876655443333333 344556788775 4 47999999999999999999999999999999999884 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhch
Q 009914 297 ILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSF 376 (522)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i 376 (522)
+....... .....+. ...+ .. . ....+.+.|++.+...| ..++...+..|+ +.+++.++.. +..+++.+
T Consensus 328 l~~~~~~~--~~~~~~~-~~~~---~~-~-~~~~~~l~glg~~~i~P-~~~s~a~~~~~~-~~~~as~l~~-~~~~g~~~ 396 (438)
T PRK10133 328 LAAYALIA--MALCLIS-AFAG---GH-V-GLIALTLCSAFMSIQYP-TIFSLGIKNLGQ-DTKYGSSFIV-MTIIGGGI 396 (438)
T ss_pred HHHHHHHH--HHHHHHH-HHcC---Ch-H-HHHHHHHHHHHHHHHHH-HHHHHHHcccch-hhccchhHHh-HHhccchH
Confidence 32221111 1111111 1111 11 1 24566778999999999 888888888774 4677888876 45578899
Q ss_pred hhHHHHHHHHH
Q 009914 377 APPVVGILAQH 387 (522)
Q Consensus 377 ~~~~~g~l~~~ 387 (522)
+|++.|.+.|.
T Consensus 397 ~~~i~G~l~~~ 407 (438)
T PRK10133 397 VTPVMGFVSDA 407 (438)
T ss_pred HHHHHHHHHHh
Confidence 99999999987
No 57
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=8.2e-30 Score=248.61 Aligned_cols=343 Identities=14% Similarity=0.143 Sum_probs=249.7
Q ss_pred HHHHHHHHHHhhhhhhHHHH-HHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHH-HHHHHHHHHHHHHH
Q 009914 12 NLAGIMERADESLLPGVYKE-VGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIA-LGAFLWAAATFLVA 89 (522)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~-~~~~~~~~~~~~~~ 89 (522)
.+.+++..+......+.+|. +.+++|.|+.++|++.+++.+...+.+++.|+++||+||||.++ .+..+.+++.++++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 34567777777888888886 56789999999999999999999999999999999999988755 45666667778888
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHH--HHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHH
Q 009914 90 FSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVA--FGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRIS 167 (522)
Q Consensus 90 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~ 167 (522)
++++++.+++.|++.|.+.+...|...+++.|+.|+++|++. .+....+.++|.++|+.+++.+.+. .+||+.
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~-----~~~~~~ 157 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG-----FGFTVM 157 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-----cccHHH
Confidence 999999999999999988888888888999998887777654 6888888999999999999999887 899999
Q ss_pred HHHHHHHHHHHHHhhhh-ccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHH
Q 009914 168 FHIVGLISVVVGTLVRL-FANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALS 245 (522)
Q Consensus 168 f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 245 (522)
|++.+++.++..++.++ +++.|+..+++. . + . +.+..++++.++......+.... ......
T Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (375)
T TIGR00899 158 FLTAALAFVLCGVLVWLFLPSYPRGAPGAL----T--R-------L----EVRGLLASRDTRLLFVACTLMWGCNILYII 220 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCccccc----C--c-------c----hhhhhhcCcchHHHHHHHHHHHHHHHHHHh
Confidence 99999887777766655 444332211100 0 0 0 11123445555444333322222 223345
Q ss_pred HHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 009914 246 FAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 324 (522)
Q Consensus 246 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (522)
+.|.|++ ++|.++.+.+.+.....+..+++.++.|++.||+++|+ ...... ....... .... . .++.
T Consensus 221 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~-----~~~~~~--~~~~~~~-~~~~-~---~~~~ 288 (375)
T TIGR00899 221 NMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR-----LMLLAA--LAGVAFY-TGLA-A---DNSL 288 (375)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh-----HHHHHH--HHHHHHH-HHHH-H---HHHH
Confidence 6788875 68999999998888877778888899999999999884 322211 1111111 1111 1 1223
Q ss_pred HHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 325 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
+.......+.|++.+...+ ....+..|..|+ +++++.|+.+...+++..++|.+.|.+.+. .||
T Consensus 289 ~~~~~~~~~~g~~~g~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~-~g~ 352 (375)
T TIGR00899 289 WALLMLQLLNAIFIGILAG-IGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAER-WSY 352 (375)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccc
Confidence 3344455666777666666 667788888875 567999999999999999999999999998 565
No 58
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=3.5e-29 Score=243.80 Aligned_cols=345 Identities=14% Similarity=0.023 Sum_probs=257.0
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHH----HHHHHHHHHH
Q 009914 9 VLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVI----ALGAFLWAAA 84 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l----~~~~~~~~~~ 84 (522)
..+.+.++..+....+..|.+|.+.+++|.|.+++|++.+++.+...++++++|+++||+||+... ..+..+..+
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~- 85 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA- 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-
Confidence 446677888888888899999999999999999999999999999999999999999999985433 222222222
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCc
Q 009914 85 TFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGW 164 (522)
Q Consensus 85 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw 164 (522)
..+..+++++.+++.|+++|.+.+...|...++..++ +++|++.++......++|.+++|++++.+.+. .||
T Consensus 86 -~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~-----~g~ 157 (382)
T TIGR00902 86 -AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM-----FDE 157 (382)
T ss_pred -HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH-----cCh
Confidence 2344678899999999999999888899988887664 46789999999999999999999999999988 899
Q ss_pred hHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHH
Q 009914 165 RISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSA 243 (522)
Q Consensus 165 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 243 (522)
|..|++.++..+ ..++...+++++++.++++ ++ +. ...+..++.+|+|.++.+....++... ....
T Consensus 158 ~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~---~~-------~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~ 224 (382)
T TIGR00902 158 QNILAILTAGLA-FMLIGFLIKPTIPPKDAIP--ED---ES-------QGDSAFIALLKNPMNLRFLAAVCLIQGAHAAY 224 (382)
T ss_pred hHHHHHHHHHHH-HHHHHHHcCCCCCCCcccc--cc---cc-------ccchhHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 999988766533 3333333443322111110 00 00 011234466788888777665555444 3456
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCch
Q 009914 244 LSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPST 323 (522)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (522)
.++.|.|+++.|.++.+.|.+.....++.+++..+.+++.||++.|+ .+... .....+. +..... .++
T Consensus 225 ~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~-----~l~~~-~~~~~~~-----~~~~~~-~~~ 292 (382)
T TIGR00902 225 YGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD-----LLLIS-AIACVGR-----WAIIGA-IEA 292 (382)
T ss_pred HHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH-----HHHHH-HHHHHHH-----HHHHHh-Hhh
Confidence 67889999999999999999999999999999999999999999883 22211 1111111 111111 244
Q ss_pred hHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHH-HHHHHhchhhHHHHHHHHHhhC
Q 009914 324 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRS-FESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~i~~~~~g~l~~~~~g 390 (522)
.+.+.....+.|+..+...+ ....++.+. |++++++.+++++. ...++..++|.++|++.|. .|
T Consensus 293 ~~~~~~~q~l~g~~~~~~~~-~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~-~g 357 (382)
T TIGR00902 293 FPLIFLLQILHCGTFAVCHL-AAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT-LG 357 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc
Confidence 45566778899999998888 778888888 98999999999874 5668999999999999998 45
No 59
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.98 E-value=2.4e-29 Score=243.04 Aligned_cols=326 Identities=24% Similarity=0.393 Sum_probs=271.7
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 009914 10 LVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVA 89 (522)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~ 89 (522)
.+.+..+...+......+..|.+.+++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+..+..++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 45667788888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHH
Q 009914 90 FSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFH 169 (522)
Q Consensus 90 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~ 169 (522)
+.++++.+++.|++.|++.+...+...+++.|++|+|+|++.+++.....++|..+++.+++.+.+. .+||+.|+
T Consensus 83 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~ 157 (352)
T cd06174 83 FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES-----LGWRWLFL 157 (352)
T ss_pred HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH-----hhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999887 78999999
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHh-hhccchhHHHHHHH
Q 009914 170 IVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG-VTGSFPWSALSFAA 248 (522)
Q Consensus 170 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 248 (522)
+.+++.++..+...+.+ |.++...... +..........+.|
T Consensus 158 ~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (352)
T cd06174 158 ILAILGLLLALLLLFLL--------------------------------------RLLLLLALAFFLLSFGYYGLLTYLP 199 (352)
T ss_pred HHHHHHHHHHHHHHHHH--------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99888887776665543 1222333322 22333445566788
Q ss_pred HHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHH
Q 009914 249 MWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMH 327 (522)
Q Consensus 249 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (522)
.+.++ .|.+..+.+.......++.+++.++.+++.||+++|+. .+... ....... ...... .++.+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~-~~~~~i~--~~~~~~----~~~~~~~ 268 (352)
T cd06174 200 LYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL----LLLIG-LLLAALG--LLLLAL----APSLALL 268 (352)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH----HHHHH-HHHHHHH--HHHHHH----hccHHHH
Confidence 88876 49999999999999999999999999999999998831 12111 1111111 111111 1224456
Q ss_pred HHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 328 GLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 328 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
....++.|++.+...+ ...+++.|..|+++|++.+|+.+...+++..++|.+.|.+.+. .++
T Consensus 269 ~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~-~~~ 330 (352)
T cd06174 269 LVALLLLGFGLGFAFP-ALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT-GGY 330 (352)
T ss_pred HHHHHHHHHHHhccch-hHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCc
Confidence 6788888999998888 8999999999999999999999999999999999999999986 565
No 60
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.98 E-value=1.4e-29 Score=250.34 Aligned_cols=357 Identities=18% Similarity=0.199 Sum_probs=278.1
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
|.+.+..++++.++..++..+....++.+..++.-|+..++++..+..+...+.++++|.++||++||++++.+.++.++
T Consensus 8 r~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~ 87 (524)
T PF05977_consen 8 RNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRAL 87 (524)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Confidence 44667788999999999999999999999999999999999999999999999999999999999999999999888776
Q ss_pred HHHHHHhh-----hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009914 84 ATFLVAFS-----STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTF 158 (522)
Q Consensus 84 ~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~ 158 (522)
..++.++. .+.+.+++..++.|++.++..|+.++++.+..|+++...++++.+...++..++||.++|.+...
T Consensus 88 ~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~-- 165 (524)
T PF05977_consen 88 VALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAF-- 165 (524)
T ss_pred HHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHH--
Confidence 65554432 37888999999999999999999999999999999999999999999999999999999999887
Q ss_pred cCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhcc
Q 009914 159 MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGS 238 (522)
Q Consensus 159 ~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (522)
.|-.++|.+.++..++........+++++. ++. +++... ++.....+.+.++|.+...+...+...
T Consensus 166 ---~G~~~~f~inalsfl~~i~~l~~~~~~~~~--~~~------~~e~~~---~~l~~G~ryv~~~~~l~~~l~~~~~~~ 231 (524)
T PF05977_consen 166 ---FGAAAAFLINALSFLISILALLRWKPPPPP--SSL------PRERFF---SALREGLRYVRSSPPLRSVLLRSFLFN 231 (524)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHccccccc--ccc------chhhhh---hhHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 788999999888766655444443322111 100 111122 334445555666776665544333333
Q ss_pred c-hhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 009914 239 F-PWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV 316 (522)
Q Consensus 239 ~-~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (522)
. .......+|.+.+ .+|.++...|++.+..+++.++|.++.+++.+|+++++ ++... ..+.+. .+..
T Consensus 232 l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~-----lv~~~-~~~~a~-----~~~~ 300 (524)
T PF05977_consen 232 LFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRR-----LVLLA-SLLFAL-----ALLL 300 (524)
T ss_pred HhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch-----hhHHH-HHHHHH-----HHHH
Confidence 3 2344456888886 58999999999999999999999999999988877663 22211 111111 1111
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 317 LPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
... ..+.+...+.+++.|++...... ...+.+++..|++.||+++|+++++...+..+|..+.|.+.+. .|
T Consensus 301 lal-~~~~~~~~~~l~l~G~~~~~~~~-~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~-~g 371 (524)
T PF05977_consen 301 LAL-SPSFWLALIALFLAGAAWIIANS-SLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH-FG 371 (524)
T ss_pred Hhc-chHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hC
Confidence 122 23445566778888988888777 7889999999999999999999999999999999999999998 45
No 61
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.98 E-value=6.1e-29 Score=242.80 Aligned_cols=352 Identities=13% Similarity=0.104 Sum_probs=260.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~ 85 (522)
..+..++..++..++..+...+++|.+++++|.|+.+.|++.+.+.+++.+++++.|++.||+|||+++.++.++++++.
T Consensus 3 ~~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 3 IPFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred cHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 34667788888899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHh---hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccc---
Q 009914 86 FLVAF---SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFM--- 159 (522)
Q Consensus 86 ~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~--- 159 (522)
+++.. .++++.+++.|++.|+|.+...+...+++.+..|+++|++.+++.+...++|..+|+.+++.+......
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 88654 358999999999999999999999999999999999999999999999999999999999888532100
Q ss_pred ------------------CCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhh
Q 009914 160 ------------------GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSV 221 (522)
Q Consensus 160 ------------------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (522)
+..+||++|++.+++.++..++..+. +.|+.++.++ + + . ...+..+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~~p~~~~~~~--~--~--~-------~~~~~~~~~ 228 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLT-KMPALNHSDA--K--Q--I-------SFSASLSRL 228 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcccc--c--c--c-------cchhhHHHH
Confidence 11369999999988777665554332 2232111100 0 0 0 001123345
Q ss_pred hcchhHHHHHHHhhhccch-hHHHHHHHHHHHHh--CCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHH
Q 009914 222 IKIPSFQIIVAQGVTGSFP-WSALSFAAMWLELT--GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIIL 298 (522)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~ 298 (522)
+++|.++..+...+++... ....++++.|.++. +.+....+...+.......+|+++++++.||+++|+ .+.
T Consensus 229 ~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~-----~l~ 303 (410)
T TIGR00885 229 ARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK-----VLM 303 (410)
T ss_pred HhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH-----HHH
Confidence 6777777765555555443 35567888888754 445555566666667888899999999999998883 322
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhh
Q 009914 299 AQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAP 378 (522)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~ 378 (522)
.. ..+..+. ..+... .++. .....+.+.|++.+..+| ..++...+..+++.+....++.... +|+++.|
T Consensus 304 i~-~~~~~~~-~ll~~~----~~~~--~~~~~l~~~glf~s~~fp-~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p 372 (410)
T TIGR00885 304 AY-AIIGMAL-CLGSIF----AGGH--VGLYCLTLCSAFMSLMFP-TIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVP 372 (410)
T ss_pred HH-HHHHHHH-HHHHHH----cCCh--HHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhHHHHHHHH--hccchHH
Confidence 22 1121111 111111 1121 134667777888887777 8899999999877654455555543 9999999
Q ss_pred HHHHHHHHH
Q 009914 379 PVVGILAQH 387 (522)
Q Consensus 379 ~~~g~l~~~ 387 (522)
++.|++.|.
T Consensus 373 ~l~G~~~d~ 381 (410)
T TIGR00885 373 PLQGFIIDM 381 (410)
T ss_pred HHHHHHHHH
Confidence 999999996
No 62
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.98 E-value=8.1e-29 Score=247.59 Aligned_cols=358 Identities=14% Similarity=0.144 Sum_probs=254.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHh-----chhHH-HHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRH-----NRAHV-IALGA 78 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-----grr~~-l~~~~ 78 (522)
++....+.+..+..+.........+|.+.++.|.+..++|.+ +.....+ ++.+++|+++||+ |||+. ++.+.
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~ 88 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQ 88 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHH
Confidence 344556677777888888899999999999999999999997 4444444 5899999999999 98885 77888
Q ss_pred HHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009914 79 FLWAAATFLVAFS---STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP 155 (522)
Q Consensus 79 ~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~ 155 (522)
+..+++...+++. .+++.+.+.+++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.++.+
T Consensus 89 i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~ 168 (491)
T PRK11010 89 LLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLAD 168 (491)
T ss_pred HHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8787887777765 4688899999999999999999999999999999999999999999999999999999999987
Q ss_pred -ccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHh
Q 009914 156 -MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 234 (522)
Q Consensus 156 -~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (522)
. .|||.+|++.+++.++..+..++. ++|+...++ ++ ..+ +...+..++.++++..+......
T Consensus 169 ~~-----~GWr~~f~i~a~l~ll~~l~~~~~-~e~~~~~~~---~~-~~~-------~~~~~~l~~~~~~~~~~~~ll~~ 231 (491)
T PRK11010 169 RY-----LGWQGMYWLMAALLIPCIIATLLA-PEPTDTIPV---PK-TLE-------QAVVAPLRDFFGRNNAWLILLLI 231 (491)
T ss_pred cc-----cCHHHHHHHHHHHHHHHHHHHHhc-CCCcccccc---cc-chh-------hhHHHHHHHHHcCcCHHHHHHHH
Confidence 4 699999999998877776655554 333221110 00 000 11122344455555554443333
Q ss_pred hhccc-hhHHHHHHHHHH-HHhCCChhHHHHHHH-HHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHH
Q 009914 235 VTGSF-PWSALSFAAMWL-ELTGFSHEKTAFLMA-LFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 311 (522)
Q Consensus 235 ~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (522)
+.... ......+.+.|+ +++|++..+.+.+.. ...++.+++.++.|+++||+++|+ .+.... .+..+....
T Consensus 232 ~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~-----~l~i~~-~l~~l~~l~ 305 (491)
T PRK11010 232 VLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFR-----ALMIFG-ILQGVSNAG 305 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHH-HHHHHHHHH
Confidence 33322 234455667776 469999999999875 556799999999999999999873 322211 111111111
Q ss_pred HHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 312 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
....... .++.+.+....++..+..+...+ ...++..+..+++.+++.+|+.+....++..+++++.|++.|. .||
T Consensus 306 ~~~l~~~--~~~~~~l~~~~~l~~~~~g~~~~-~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~-~G~ 381 (491)
T PRK11010 306 YWLLSIT--DKNLYSMGAAVFFENLCGGMGTA-AFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA-HGW 381 (491)
T ss_pred HHHHHhc--cccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCh
Confidence 1111111 12222233334443333333334 5678888999999999999999999999999999999999998 576
No 63
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.98 E-value=4e-29 Score=243.83 Aligned_cols=333 Identities=13% Similarity=0.089 Sum_probs=239.9
Q ss_pred HhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 009914 21 DESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAIS 100 (522)
Q Consensus 21 ~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (522)
...+..+.+|.+.+++|.|+.+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.+.++++.+++.
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 44567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHH
Q 009914 101 RALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGT 180 (522)
Q Consensus 101 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~ 180 (522)
|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+. .+||+.|++.+++.++..+
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~ 160 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-----FSWHAIFWVLALAAILAAA 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887 8999999998888777766
Q ss_pred hhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHHHHHHHH-HhCCCh
Q 009914 181 LVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSFAAMWLE-LTGFSH 258 (522)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~g~~~ 258 (522)
+..+..++++..++++ +. +.++..+..++.++++.++........... .+....+.|.++. .+|+++
T Consensus 161 ~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 229 (377)
T PRK11102 161 LVFFFIPETLPKERRQ-----PF------HLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSP 229 (377)
T ss_pred HHHHhCCccCcccccC-----CC------ChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCH
Confidence 6555433322111100 00 012223445566777776655443333222 2334455566664 589999
Q ss_pred hHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHH
Q 009914 259 EKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFI 338 (522)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 338 (522)
.+.+.+.....++.+++.++.+++.||+++|+ .............+..... ... +...+...+...+.+.+.
T Consensus 230 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~-----~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~ 301 (377)
T PRK11102 230 QNFGYYFALNIVFLFVMTIINSRFVRRVGALN-----MLRFGLWIQFIMGIWLVVS-ALL--DLGFWALVVGVAAFVGCV 301 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH-----HHHHHHHHHHHHHHHHHHH-HHH--hhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999884 3332222111111111111 111 111222223333333333
Q ss_pred hccCCCcchhhhhhhcCcchhHHHHHHHHHHHH-HHhchhhH
Q 009914 339 SWNAPATNNPIFAEIVPEKSRTSVYAMDRSFES-ILSSFAPP 379 (522)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~i~~~ 379 (522)
+.... .....+.|..| +.++++.++.+.... ++..+++.
T Consensus 302 ~~~~~-~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~ 341 (377)
T PRK11102 302 SMISS-NAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGAL 341 (377)
T ss_pred HHhhH-HHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 33333 34566677766 789999998876654 33344443
No 64
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.98 E-value=2e-29 Score=245.05 Aligned_cols=352 Identities=14% Similarity=0.096 Sum_probs=246.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHH-HHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKE-VGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF 86 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~ 86 (522)
++..+++++..........+..|. +.+++|+|+.+.+++.+++.+++.+++++.|+++||+|||+.+.++.++.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 445777778888888889999995 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhh-hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc-----ccC
Q 009914 87 LVAFSS-TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT-----FMG 160 (522)
Q Consensus 87 ~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~-----~~~ 160 (522)
++++++ +++.+++.|+++|++.+. .+...+++.+++|+++|++++++.....++|..+++.+++.+.... ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 83 WAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999 999999999999998654 5667899999999999999999999888888888887777665420 001
Q ss_pred CCCchHHH-HHHHHHHHHHHHhhhh-ccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhcc
Q 009914 161 IPGWRISF-HIVGLISVVVGTLVRL-FANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGS 238 (522)
Q Consensus 161 ~~gw~~~f-~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (522)
..+||+.| ++.+++.++..++.+. .+++|+..+++++.+...... ...++..+..++.+++|.++......+...
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARW---SVGTGALGDQLKVFRDRHTWILALLYSVTF 238 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccc---cccchhHHHHHHHHhccchhhHHHHHHHHH
Confidence 24899999 4445555444444444 344443221111100000000 000111223445566777666555444433
Q ss_pred c-hhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 009914 239 F-PWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV 316 (522)
Q Consensus 239 ~-~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (522)
. .+....+.|.|++ .+|+++.+++.+.....+..++++++.|++.||+++|+ .......... . ....+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-----~~~~~~~~~~-~--~~~~~~~ 310 (366)
T TIGR00886 239 GSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR-----KLLMSFLGVA-M--GAFLVVL 310 (366)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch-----hHHHHHHHHH-H--HHHHHHh
Confidence 3 3455678898986 47999999999999999999999999999999999874 2222211111 1 1111111
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHH
Q 009914 317 LPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESIL 373 (522)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 373 (522)
................+.+++.+.... ..++...+..| +++|+++|+.+.+.++|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 311 GLVSPLSLAVFIVLFVALFFFSGAGNG-STFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred cCCCcchHHHHHHHHHHHHHHhccccc-hhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 111111333344445555556665555 66777888887 68999999999887765
No 65
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=7.4e-31 Score=254.90 Aligned_cols=346 Identities=19% Similarity=0.216 Sum_probs=258.0
Q ss_pred HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHhhhh
Q 009914 34 AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSS--TFAQVAISRALNGIGLALV 111 (522)
Q Consensus 34 ~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~ 111 (522)
.++++|..+.|++.+.+..|+.+++++.|++.||+|.|+++..+.++.++++++..++. +++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 46889999999999999999999999999999999999999999999999999999875 4567899999999999999
Q ss_pred HHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCC-CC
Q 009914 112 APAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFAND-PH 190 (522)
Q Consensus 112 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~-~~ 190 (522)
+|+...+..+|.|++||++..++...+..+|.+++.+++|++.+.. .||+.+|++.++++++..++.+++..| |.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~----~GW~sifY~~g~~g~i~~~~w~~~~~d~P~ 221 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESS----LGWPSIFYVFGIVGLIWFILWFLFYSDSPS 221 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccC----CCCchHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999999999998753 799999999999999999888776654 43
Q ss_pred CCCCCCCCCcccccchhh--hhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHHHHHHHHH-hCCChhHHHHHHH
Q 009914 191 FPDGGTANSDQVSSKSFR--SDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSFAAMWLEL-TGFSHEKTAFLMA 266 (522)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 266 (522)
..+.-.++|.+.-.+... ...+...-.++++++++.+|.+.+..+.... .+....+.|.|+++ +|++..+.|++.+
T Consensus 222 ~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~sa 301 (466)
T KOG2532|consen 222 KHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSA 301 (466)
T ss_pred cCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHH
Confidence 322211111100000000 0000012356788999999988877777666 46777899999975 9999999999999
Q ss_pred HHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcc
Q 009914 267 LFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATN 346 (522)
Q Consensus 267 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 346 (522)
+..+...+..+++|.++||+.+|...........-.+........+..+.+....+.+ ..+.++.++.+......+..
T Consensus 302 lP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~--~a~~~l~~~~~~~g~~~~Gf 379 (466)
T KOG2532|consen 302 LPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRL--LAVILLTIAIGLSGFNISGF 379 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcch--HHHHHHHHHHHHcccchhhh
Confidence 9999999999999999999987522222222222222332222222222222222221 22333333333333333123
Q ss_pred hhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 009914 347 NPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 386 (522)
Q Consensus 347 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~ 386 (522)
+.-..+.. +++.+..+|+.+.+..+.+.++|.+.|.+..
T Consensus 380 ~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~ 418 (466)
T KOG2532|consen 380 YKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVT 418 (466)
T ss_pred Hhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeC
Confidence 33333434 5889999999999999999999999999884
No 66
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=6.1e-28 Score=235.99 Aligned_cols=349 Identities=11% Similarity=0.124 Sum_probs=233.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHH-HHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHH-HHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKE-VGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVI-ALGAFLWAA 83 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l-~~~~~~~~~ 83 (522)
.....+.+..++..+......+.+|. +.+++|.|++++|++.+...+...+.+++.|.++||+||||.+ ..+.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~ 94 (393)
T PRK15011 15 LTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVL 94 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 34455666788888887777777665 5788999999999998776665454555555559999998874 556666667
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCch--hHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 009914 84 ATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNR--GVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGI 161 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~ 161 (522)
+..+.+++++++.+++.+.+.+...+...|...+++.++.++++| +...++.+.+.++|.++||++++.+.+.
T Consensus 95 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~----- 169 (393)
T PRK15011 95 ACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG----- 169 (393)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-----
Confidence 777888889998887666555555567788888888888776655 3456889999999999999999999887
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchh-HHHHHHHhhhccch
Q 009914 162 PGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPS-FQIIVAQGVTGSFP 240 (522)
Q Consensus 162 ~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 240 (522)
.|||..|++.++..++..++.++..++++.++++.+ ++ . +. .++ +++. ++.+..........
T Consensus 170 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~-------~~----~~~--~~~~~~~~~~~~~~~~~~~ 232 (393)
T PRK15011 170 FSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLAT--GT--L-------EA----PRR--NRRDTLLLFVICTLMWGTN 232 (393)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccc--cc--c-------cc----ccc--ccccHHHHHHHHHHHHHHH
Confidence 899999999988887777666554433321111110 00 0 00 000 1111 22222222222222
Q ss_pred hHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCC
Q 009914 241 WSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPD 319 (522)
Q Consensus 241 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (522)
+....+.|.|++ ++|++..+.+.+.....++.+++.++.|+++||+++|+ ...... ...... .... ...
T Consensus 233 ~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~-----~~~~~~--~~~~~~-~~~~-~~~- 302 (393)
T PRK15011 233 SLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF-----LMRVAA--VAGVCF-YAGM-LMA- 302 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-----HHHHHH--HHHHHH-HHHH-HHH-
Confidence 334457888886 58999999998888877888889999999999999883 322211 111111 1111 111
Q ss_pred CCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 320 DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 320 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
++.+......++.++..+...+ ....+..|..|+ +++++.++.+...++|..++|.+.|.+.|. .||
T Consensus 303 --~~~~~~l~~~~l~~~~~g~~~~-~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~-~g~ 369 (393)
T PRK15011 303 --HSPAILLGLQLLNAIYIGILGG-IGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEI-WNY 369 (393)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHH-hhh
Confidence 1222233344444444444444 445677888885 599999999999999999999999999997 565
No 67
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=1.3e-28 Score=237.80 Aligned_cols=335 Identities=18% Similarity=0.180 Sum_probs=244.7
Q ss_pred hhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 009914 22 ESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISR 101 (522)
Q Consensus 22 ~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 101 (522)
....++.+|.+.+++|.|+++.|++.+++.++..+++++.|+++||+|||+++.++.++.+++.+.+ ..++++.+++.|
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~ 94 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGT 94 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999998888888777 778899999999
Q ss_pred HHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHh
Q 009914 102 ALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTL 181 (522)
Q Consensus 102 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~ 181 (522)
++.|++.+...+....++.++++ ++|++++++.+....+|..+++.+++.+.+.. ..+||+.|.+.++..++...
T Consensus 95 ~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~---~~~w~~~f~~~~~~~~~~~~- 169 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHS---GGHWQQALAWWALPALLALL- 169 (355)
T ss_pred HHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHHHHH-
Confidence 99999999988888889999886 67999999999999999999999998887641 02499999887765444332
Q ss_pred hhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhcc-chhHHHHHHHHHHHHhCCChhH
Q 009914 182 VRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGS-FPWSALSFAAMWLELTGFSHEK 260 (522)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~ 260 (522)
.+.++.+++++++++ ... ...++.+|+|.++.......... ..+....++|.|+++.|++..+
T Consensus 170 -~~~~~~~~~~~~~~~----~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~ 233 (355)
T TIGR00896 170 -AWIPQVRRRVAANQT----TTR-----------LTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAAT 233 (355)
T ss_pred -HHhhhhccccCCCCC----CCC-----------CCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 223322211111000 000 11233456666665544333333 3455667899999889999999
Q ss_pred HHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhc
Q 009914 261 TAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISW 340 (522)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 340 (522)
.+.+.+...++.++++++.|++.||+++|+ +..... ..+..... +.+... ..... . ....+.|++.+.
T Consensus 234 ~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----~~~~~~-~~~~~~~~--~~~~~~---~~~~~-~-~~~~l~g~~~g~ 301 (355)
T TIGR00896 234 AGSLLALMQLAQAASALLIPALARRVKDQR----GIVAVL-AVLQLVGL--CGLLFA---PMHGL-W-AWALVLGLGQGG 301 (355)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhccch----HHHHHH-HHHHHHHH--HHHHHh---hhhHH-H-HHHHHHHHhhhh
Confidence 999999999999999999999999996553 122211 11111111 111111 11111 1 234567888877
Q ss_pred cCCCcchhhhhhhc-CcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 341 NAPATNNPIFAEIV-PEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 341 ~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
..+ ...+.+.+.. +++.++...++.+.+.+++..++|.+.|++.|+..+|
T Consensus 302 ~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~ 352 (355)
T TIGR00896 302 AFP-LALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNW 352 (355)
T ss_pred HhH-HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 777 5556555444 4567789999999999999999999999999995444
No 68
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=2.1e-27 Score=233.12 Aligned_cols=349 Identities=17% Similarity=0.149 Sum_probs=239.7
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHh-----chhH-HHHHHHHHHHHH
Q 009914 11 VNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRH-----NRAH-VIALGAFLWAAA 84 (522)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-----grr~-~l~~~~~~~~~~ 84 (522)
+...++.+++........+|.+.++.|.|.+++|++..+... .+..+++|+++||+ |||| ++.++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 455677788888889999999999999999999999777665 58899999999999 7765 688888888888
Q ss_pred HHHHHhh---hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 009914 85 TFLVAFS---STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGI 161 (522)
Q Consensus 85 ~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~ 161 (522)
..++++. .+++.+++..++.++..+...++..+++.|++|+++|+++.++...+.++|.++++.+++.+.+..
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~---- 157 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV---- 157 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc----
Confidence 8887776 357778888888888899999999999999999999999999999999999999999999888741
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccch-
Q 009914 162 PGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFP- 240 (522)
Q Consensus 162 ~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (522)
.|||..|++.+++.++..+...+. ++|+..++++ + + .. ++..+..++++++|.++.++...+.....
T Consensus 158 ~gw~~~f~i~a~~~l~~~l~~~~~-~e~~~~~~~~--~--~----~~---~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~ 225 (402)
T PRK11902 158 LGWGNTYLLMAGLMLAGALTTLWA-PEPEVPARPP--R--S----LG---EAVVGPLRDFFSRRGAWALLLLIVLYKLGD 225 (402)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhc-CCCccccccc--c--h----hH---HHHHHHHHHHHhCcCHHHHHHHHHHHHhHH
Confidence 499999999988777665544334 3332211110 0 0 00 12334556678888877655544333322
Q ss_pred hHHHHHHHHHH-HHhCCChhHHHHHHHHHH-HHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCC
Q 009914 241 WSALSFAAMWL-ELTGFSHEKTAFLMALFV-IASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP 318 (522)
Q Consensus 241 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (522)
.....+.+.++ +++|+++.+.+++....+ ++.+++.++.+++.||+++|+ ....... ...+...........
T Consensus 226 ~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~-----~l~~~~~-~~~l~~l~~~~~~~~ 299 (402)
T PRK11902 226 AFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYR-----SLMLFGV-LQAVSNLGYWVLAVT 299 (402)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHH-HHHHHHHHHHHHHhc
Confidence 22223434444 568999999999886655 468899999999999999873 3222111 111111111111111
Q ss_pred CCCchhHHHHHHH----HHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 319 DDPSTPVMHGLVL----VVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 319 ~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
+++.+.+.... +..|++.+.... ....++.+..| ++..++.+....++..++++++|.+.|. .||
T Consensus 300 --~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~G~l~~~-~G~ 368 (402)
T PRK11902 300 --PKHLWTMALAIGIENLCGGMGTAAFVA-LLMALCNRSFS----ATQYALLSALASVGRVYVGPTSGYLVEA-YGW 368 (402)
T ss_pred --CCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCc----HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCh
Confidence 12223233333 234444444444 44555555555 4445666666677777777899999999 676
No 69
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=1.5e-28 Score=241.44 Aligned_cols=351 Identities=15% Similarity=0.203 Sum_probs=245.2
Q ss_pred HHHHHHhhhhhhHHHHHHHhcC--CChhhhHHHHHH-----HHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHH
Q 009914 16 IMERADESLLPGVYKEVGAALH--TDPTGLGSLTLF-----RSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLV 88 (522)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~g--~s~~~~g~~~s~-----~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~ 88 (522)
+.+.+++..+++..+.+.+++. .++++.+.+.+. ..++..+++++.|+++||+|||+++..+.++.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4567788888888888888764 445666665543 333445688999999999999999999999999999999
Q ss_pred HhhhhHH--------HHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc---
Q 009914 89 AFSSTFA--------QVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT--- 157 (522)
Q Consensus 89 ~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~--- 157 (522)
+++++++ .+++.|+++|++.+...+...+++.|++++++|++..++...+..+|.++++.++..+....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9998875 47889999999999999999999999999999999999999999999999998887664210
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchh--HHHHHHHhh
Q 009914 158 FMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPS--FQIIVAQGV 235 (522)
Q Consensus 158 ~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 235 (522)
.....+||++|++.+++.++...+....+++++.+.++++.+ +. ..+.++ .++++. ++......+
T Consensus 163 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~-------~~~~~~~~~~~~~~~~~ 229 (394)
T TIGR00883 163 ALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKHK---KK---RGPIRE-------TLTKHRKPFLLGLGLVI 229 (394)
T ss_pred HhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhccc---cc---cCCHHH-------HHHhchHHHHHHHHHHH
Confidence 011269999999887776665544444444432221111100 00 011121 222222 333333333
Q ss_pred hcc-chhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHH
Q 009914 236 TGS-FPWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 313 (522)
Q Consensus 236 ~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (522)
... ..+....+.|.|++ ++|.+..+.+.......++.+++.++.+++.||+++|+ ..................
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----~~~~~~~~~~~~~~~~~~ 304 (394)
T TIGR00883 230 ATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRP-----VLIIFTVLAALLAVPLLM 304 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH-----HHHHHHHHHHHHHHHHHH
Confidence 322 23455678899985 68999999999999999999999999999999999883 222221111111111111
Q ss_pred HHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHH-HHHHHHhchhhHHHHHHHHHh
Q 009914 314 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDR-SFESILSSFAPPVVGILAQHV 388 (522)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~i~~~~~g~l~~~~ 388 (522)
.... ..+.+......++.+++.+...+ ...+++.|.+|++.|+++.|+.. ....++..++|.+.|++.++.
T Consensus 305 --~~~~-~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~ 376 (394)
T TIGR00883 305 --ALLD-SGSFTLFFFLVLGLALIGGMYTG-PMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT 376 (394)
T ss_pred --HHhc-CCchHHHHHHHHHHHHHHHHHhh-hHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence 1111 12333344556677777777777 78899999999999999999854 445678889999999999983
No 70
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=1.2e-27 Score=233.18 Aligned_cols=342 Identities=14% Similarity=0.060 Sum_probs=244.1
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchh----HHHHHHHHHHHHHHHH
Q 009914 12 NLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRA----HVIALGAFLWAAATFL 87 (522)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr----~~l~~~~~~~~~~~~~ 87 (522)
...++..........+.+|.+.+++|.|..++|++.+++.++..++++++|+++||+||| +.+.+...+. ....
T Consensus 10 ~~~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~ 87 (382)
T PRK11128 10 ALSYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAF 87 (382)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHH
Confidence 334555666678889999999999999999999999999999999999999999999984 3333222222 2233
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHH
Q 009914 88 VAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRIS 167 (522)
Q Consensus 88 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~ 167 (522)
....++++.+++.|++.|++.+...|...+++.++ +++|++.++......++|.++||++++++.+. .|||..
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~-----~g~~~~ 160 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW-----FGEQAI 160 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH-----cChhHH
Confidence 34457899999999999999999999888888876 35678889999999999999999999999988 899999
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHH
Q 009914 168 FHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSF 246 (522)
Q Consensus 168 f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 246 (522)
|++.++..++..+...+. +++++..++ ++. . ++..+..++.+|+|.++......+.... .....++
T Consensus 161 f~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~--~-------~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 227 (382)
T PRK11128 161 LWILTAGVASMLLGQLLR-PTIMPQGES---RQQ--E-------SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGF 227 (382)
T ss_pred HHHHHHHHHHHHHHHHcc-CCCCCcccc---ccc--c-------ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHH
Confidence 998876555444333322 222111110 000 0 0011234567788888776554444333 3345567
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHH
Q 009914 247 AAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVM 326 (522)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (522)
.|.|+++.|.+..+.|.+.+...++.++..++.+++.||+++++ .+... .....+ .. .... . .++.+.
T Consensus 228 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~-----~l~~~-~~~~~~--~~-~~~~--~-~~~~~~ 295 (382)
T PRK11128 228 SAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARD-----LLLLS-AICGVV--RW-GLMG--S-TTALPW 295 (382)
T ss_pred HHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-----HHHHH-HHHHHH--HH-HHHH--h-hhhHHH
Confidence 88898889999999999999888999999999999999999883 32221 111111 11 1111 1 233444
Q ss_pred HHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHH-HHHHhchhhHHHHHHHHHhhC
Q 009914 327 HGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSF-ESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 327 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~i~~~~~g~l~~~~~g 390 (522)
..+..++.|++.+...+ ....+..+. +++++++..++.+.. ..++..++|.++|.+.|. .|
T Consensus 296 ~~~~~~l~g~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~-~g 357 (382)
T PRK11128 296 LIVIQILHCGTFTVCHL-AAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH-LG 357 (382)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc
Confidence 56677788888887777 667777776 556678999988744 456678999999999998 44
No 71
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=3.7e-28 Score=239.95 Aligned_cols=358 Identities=11% Similarity=0.070 Sum_probs=230.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHH-HHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKE-VGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
++.++.+.+.+++..+......+.+|. +.+++|+|+.++|++.+++.++..++++++|+++||+|||++++++..+.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLV 88 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 345555666777777766666666665 4556999999999999999999999999999999999999998887666554
Q ss_pred HHHHHHh---hhh-----HHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009914 84 ATFLVAF---SST-----FAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP 155 (522)
Q Consensus 84 ~~~~~~~---~~~-----~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~ 155 (522)
+...... .+. +...++.+++.|.+.....+....+..+ . .+++++.++......++|..++|++++.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 166 (420)
T PRK09528 89 LFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN 166 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh
Confidence 4332211 111 1112233333443333333333343332 2 2456778899999999999999999998875
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhh
Q 009914 156 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGV 235 (522)
Q Consensus 156 ~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (522)
.+|+.+|++.+++.++..++.++..++++++...+++++.+++ +...++.+..+|+|.++.+.+..+
T Consensus 167 ------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~l~l~~~ 233 (420)
T PRK09528 167 ------INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANAS-------AVSLKDALALLKLPKFWFLVLYVI 233 (420)
T ss_pred ------cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccc-------cccHHHHHHHccCCCeEeehHHHH
Confidence 5899999998888777766666554443322111110000000 111233445667777655444333
Q ss_pred hccchh-HHHHHHHHHHHH----hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHH
Q 009914 236 TGSFPW-SALSFAAMWLEL----TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLA 310 (522)
Q Consensus 236 ~~~~~~-~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (522)
.....+ ....+.|.|+.+ .+.+..+.+.+.++..+..+++.++.|++.||+++|+ ..... ..+.+. .
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----~~~~~-~~l~~~--~ 305 (420)
T PRK09528 234 GVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKN-----ALLLA-GTIMAV--R 305 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-----hhHHH-HHHHHH--H
Confidence 332222 233456666643 3566678899999999999999999999999999984 22221 111111 1
Q ss_pred HHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHH-HHHHHHHHhchhhHHHHHHHHHhh
Q 009914 311 ALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAM-DRSFESILSSFAPPVVGILAQHVY 389 (522)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~i~~~~~g~l~~~~~ 389 (522)
...... .++ .+.+.....+.+++.+...+ ....++.+..|++.+++..+. .++...+|..++|.+.|++.|. .
T Consensus 306 -~~l~~~--~~~-~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~-~ 379 (420)
T PRK09528 306 -IIGSGF--ATG-PLEVSILKLLHAFEVPFLLV-GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS-I 379 (420)
T ss_pred -HHHHHh--ccc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh-h
Confidence 111111 122 33344556666766665555 456788899999999888766 6777889999999999999998 6
Q ss_pred Cc
Q 009914 390 GF 391 (522)
Q Consensus 390 g~ 391 (522)
||
T Consensus 380 G~ 381 (420)
T PRK09528 380 GF 381 (420)
T ss_pred Cc
Confidence 76
No 72
>TIGR00898 2A0119 cation transport protein.
Probab=99.97 E-value=2.9e-29 Score=254.21 Aligned_cols=337 Identities=16% Similarity=0.126 Sum_probs=240.3
Q ss_pred hHHHHHHHhcCCC---hhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 009914 27 GVYKEVGAALHTD---PTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRAL 103 (522)
Q Consensus 27 ~~~~~~~~~~g~s---~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 103 (522)
+..|.+.++++++ +.+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++.+++++++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5667888999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhh
Q 009914 104 NGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVR 183 (522)
Q Consensus 104 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~ 183 (522)
.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+ .+||+.|++.++..++..+..+
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--------~~wr~~~~~~~i~~~~~~~~~~ 261 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI--------PDWRWLQLAVSLPTFLFFLLSW 261 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988765 4599999999998888877777
Q ss_pred hccCCCCCCCCCCCCCcccc-------------cchh-----hhhhHHH--HHHhhhhhcchhHHHHHHHhhhccchhHH
Q 009914 184 LFANDPHFPDGGTANSDQVS-------------SKSF-----RSDVKVL--IQEAKSVIKIPSFQIIVAQGVTGSFPWSA 243 (522)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~-------------~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (522)
+++|+|++...+++.++..+ .... .++..+. ....+.++++|.++...+...........
T Consensus 262 ~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 341 (505)
T TIGR00898 262 FVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAF 341 (505)
T ss_pred hcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 77777754322221110000 0000 0000000 01334567777766554443333322222
Q ss_pred HHH-HHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 009914 244 LSF-AAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS 322 (522)
Q Consensus 244 ~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (522)
..+ .+.+....+.+.. ....+.++..+++.++.+++.||+|||+ .+... ..+.++.. +.+...+. .
T Consensus 342 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~-----~~~~~-~~~~~~~~--l~~~~~~~--~ 408 (505)
T TIGR00898 342 SYYGLVLDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRY-----TMAAS-LLLAGVAL--LLLLFVPV--D 408 (505)
T ss_pred HHHHHhccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHH-----HHHHH-HHHHHHHH--HHHHHcCC--C
Confidence 222 3334445555543 3334556777888999999999999883 22221 11211111 11111221 1
Q ss_pred hhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 009914 323 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 386 (522)
Q Consensus 323 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~ 386 (522)
..+......++.+++.+...+ ..+.+..|.+|++.|+++.|+.++...+|+.++|.+.+ +.+
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~ 470 (505)
T TIGR00898 409 LYFLRTALAVLGKFGITSAFQ-MVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE 470 (505)
T ss_pred chHHHHHHHHHHHHHHHHHHH-HHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH
Confidence 122233444455555555555 67889999999999999999999999999999999988 443
No 73
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4.9e-27 Score=213.71 Aligned_cols=356 Identities=16% Similarity=0.127 Sum_probs=278.5
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
+.+..+..+...+++.++......+++|.+++.++++..|.+++..+++.++.+.+++.|++.+|+|+|+.++.|+.+++
T Consensus 10 ~~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~a 89 (422)
T COG0738 10 SVKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYA 89 (422)
T ss_pred CceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHH
Confidence 34456777788888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH---hhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc--
Q 009914 83 AATFLVA---FSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT-- 157 (522)
Q Consensus 83 ~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~-- 157 (522)
+++.++. ...++..++++.++.|.|.+...++.+.++....++++..+.+++.+.+.++|.++||++++.+....
T Consensus 90 vg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~ 169 (422)
T COG0738 90 VGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVA 169 (422)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Confidence 9999985 45688899999999999999999999999999999988899999999999999999999999987621
Q ss_pred ------------ccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcch
Q 009914 158 ------------FMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIP 225 (522)
Q Consensus 158 ------------~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (522)
......|+.+|...+...+++.+..... +.|+.+..+.+..+. ++. ...+++++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~-k~p~~~~~~~~~~~~----------~~~--~~~~l~~~~ 236 (422)
T COG0738 170 LTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLS-KLPDLQVAAPSLGAS----------GSA--GLSSLFQNK 236 (422)
T ss_pred hccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhc-cCCcCCccccccccc----------ccc--hHHHHHhCh
Confidence 0111358889998888776666655442 223222211110100 000 334567888
Q ss_pred hHHHHHHHhhhccch-hHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHH
Q 009914 226 SFQIIVAQGVTGSFP-WSALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISS 303 (522)
Q Consensus 226 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 303 (522)
.++...+..+++... ....+|++.|+.+ .|.+..+++...+....+.++|++++.++.+|+...| .+....
T Consensus 237 ~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k-----~Laf~a-- 309 (422)
T COG0738 237 HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEK-----YLAFYA-- 309 (422)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH-----HHHHHH--
Confidence 888888887777775 4666899999987 8999999999999999999999999999999988773 322222
Q ss_pred HHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHH
Q 009914 304 LSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGI 383 (522)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~ 383 (522)
++.+.+.....+. ++ .+.....++.|++.+..+| ...+...+..| ++ ....|..-.+..+|+++.|++.|+
T Consensus 310 ~~~ill~~~~~l~----~g--~v~~~~l~~ig~F~simfP-TIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~ 380 (422)
T COG0738 310 LIAILLLLAVALI----GG--VVALYALFLIGLFNSIMFP-TIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGV 380 (422)
T ss_pred HHHHHHHHHHHHh----cC--hHHHHHHHHHHHHhHHHHH-HHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHH
Confidence 1111111111111 12 3355678889999999999 88999999998 33 344444455677899999999999
Q ss_pred HHHH
Q 009914 384 LAQH 387 (522)
Q Consensus 384 l~~~ 387 (522)
+.|.
T Consensus 381 i~d~ 384 (422)
T COG0738 381 IADM 384 (422)
T ss_pred HHHh
Confidence 9999
No 74
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=1.3e-27 Score=264.60 Aligned_cols=328 Identities=11% Similarity=0.011 Sum_probs=239.6
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHH---HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHH
Q 009914 41 TGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIAL---GAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQS 117 (522)
Q Consensus 41 ~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 117 (522)
...++..+++.++++++++++|+++||+|||+++.. ..++.++..+.....++++.++++|+++|++.++..|+..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457888899999999999999999999999997533 22222233333334489999999999999999999999999
Q ss_pred HHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCC
Q 009914 118 LVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTA 197 (522)
Q Consensus 118 ~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 197 (522)
++.+++++++|++++|+.+++.++|.++||++++++... .+|++.|+..++..++..++.+++++.++.....+
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 205 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS-----GNFVILVALLMGIAVLGWLASLFIPKTGNAAPDLK- 205 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc-----cccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCe-
Confidence 999999999999999999999999999999999999987 89999995555555554444444544332111100
Q ss_pred CCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHhcc
Q 009914 198 NSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLG 275 (522)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 275 (522)
. ... ..++....++.+.+++.++...+..+.... ......++|.|+++ +|.+....+++.+..+++.+++
T Consensus 206 --~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig 277 (1140)
T PRK06814 206 --I---DRN---IIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVG 277 (1140)
T ss_pred --e---ccc---hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 0 001 112334456677788888877665554444 34556789999975 8999999999999999999999
Q ss_pred chhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHH---------------hCCCCCchhHHHHHHHHHHHHHHhc
Q 009914 276 GLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL---------------VLPDDPSTPVMHGLVLVVTGLFISW 340 (522)
Q Consensus 276 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~g~~~~~ 340 (522)
.++.+++.++..+++. ..... ++.++....+.+. .+.. ....+.+.+..+++|++.+.
T Consensus 278 ~~~~g~l~~~~~~~~~-----~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~ 350 (1140)
T PRK06814 278 SFLASKLSEGRITLLY-----VPIGA-LLMGLFGLDLAFASSSVPAEPAQLKSILVFLS-KRHGWRILIDLFGLAAAGGL 350 (1140)
T ss_pred HHHHHHHhCCceeeee-----ehHHH-HHHHHHHHHHHhcccccccccccccchhhhhc-ccccHHHHHHHHHHHHHHHH
Confidence 9999999987665532 11111 1111111111110 0000 12234455677778888888
Q ss_pred cCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 341 NAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
..+ ...+++++.+|++.+|+++|+.+++..++..+++.+.|.+.+...+
T Consensus 351 ~~~-~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~ 399 (1140)
T PRK06814 351 YIV-PLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFS 399 (1140)
T ss_pred hHH-HHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 887 7899999999999999999999999999999999999999865333
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=2.4e-27 Score=232.65 Aligned_cols=346 Identities=13% Similarity=0.042 Sum_probs=235.7
Q ss_pred HHHHHHHHHHHhhhh-hhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhch-hHHHHHHHHHHHHHHHHH
Q 009914 11 VNLAGIMERADESLL-PGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNR-AHVIALGAFLWAAATFLV 88 (522)
Q Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~gr-r~~l~~~~~~~~~~~~~~ 88 (522)
+++.++..+....+. +++.+.+.+++|.+..++|++.+++.++..++++++|+++||+|| |+++.++.++.+++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 455556666666665 666667778899999999999999999999999999999999965 778888888888888888
Q ss_pred HhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhc--------cCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 009914 89 AFSSTFAQVAISRALNGIGLALVAPAIQSLVADS--------TDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMG 160 (522)
Q Consensus 89 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~--------~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~ 160 (522)
.+.++++.+++.|++.|++.+...+...++...+ .....|.+.+| .+|.++|+.+++.+...
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~---- 156 (418)
T TIGR00889 87 AQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIE---- 156 (418)
T ss_pred HHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhccc----
Confidence 8888999999999999998877777766654322 22223444444 47889999998877332
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccch
Q 009914 161 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFP 240 (522)
Q Consensus 161 ~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (522)
..|+ +|++.+++.++..++.++++|+|+.++++ + . + .. +......+..+|+|.++.+....++....
T Consensus 157 -~~~~-~f~~~~~~~~~~~~~~~~~~e~~~~~~~~---~--~-~--~~---~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 223 (418)
T TIGR00889 157 -LSNI-QLYITAGSSALLGVFALTLPDIPVAKSTA---K--M-S--IK---VMLGLDAFILFKNKRMAIFFFFSMLLGAP 223 (418)
T ss_pred -chhH-HHHHHHHHHHHHHHHHhcCCCCCCCcccc---c--c-C--HH---HHhhhhHHHHhcCCCeeeHHHHHHHHHhH
Confidence 3344 46666666666655544454433211110 0 0 0 00 11111233467777766655554444332
Q ss_pred -hHHHHHHHHHHHHhCCCh--------hHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHH
Q 009914 241 -WSALSFAAMWLELTGFSH--------EKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 311 (522)
Q Consensus 241 -~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (522)
.....+.+.++++.|.++ ...+...++..+..+++.++.+++.||+++|+ .+.... .+.++ ..
T Consensus 224 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~-----~l~~~~-~~~~v--~~ 295 (418)
T TIGR00889 224 LQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKK-----VMLLSL-VAWAL--RF 295 (418)
T ss_pred HHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-----HHHHHH-HHHHH--HH
Confidence 234456788887766553 56688999999999999999999999999984 322221 11111 11
Q ss_pred HHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHH-HHHHHHhchhhHHHHHHHHHh
Q 009914 312 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDR-SFESILSSFAPPVVGILAQHV 388 (522)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~i~~~~~g~l~~~~ 388 (522)
..+..........+.+.+..++.|++.+...+ ....++.|.+|++.|++++|+.+ ....++..++|.+.|++.|+.
T Consensus 296 ~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~-~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~ 372 (418)
T TIGR00889 296 GFFAYGDPEYFGYALLFLSMIVYGCAFDFFNI-SGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKM 372 (418)
T ss_pred HHHHHcCcchhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 11111111111233455567778888777666 67788999999999999999997 567899999999999999984
No 76
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.3e-27 Score=224.87 Aligned_cols=400 Identities=14% Similarity=0.133 Sum_probs=278.6
Q ss_pred HHHHHHHHHhhhhhhHHHHH--------HHhcC--CChh----hhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHH
Q 009914 13 LAGIMERADESLLPGVYKEV--------GAALH--TDPT----GLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGA 78 (522)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~--------~~~~g--~s~~----~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~ 78 (522)
++.+-.++....+++..+.+ .+.+| .++. ..+.+.+++.+|.+++++..|.++||+|||..+.+..
T Consensus 18 ~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~ 97 (485)
T KOG0569|consen 18 LGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSN 97 (485)
T ss_pred HhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 33344555555555444333 34455 3333 3577889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHh-hh
Q 009914 79 FLWAAATFLVAFS---STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVV-MA 154 (522)
Q Consensus 79 ~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~-l~ 154 (522)
++..++.+++.++ ++++.++++|++.|+..+.......-++.|..|++.||......+.+..+|.+++..++.. +.
T Consensus 98 ~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~il 177 (485)
T KOG0569|consen 98 LLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLL 177 (485)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhc
Confidence 8888887777664 6889999999999999999999999999999999999999999999999999999776643 22
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCC-CCCCCcccc-------c---chhh----hhhHHH-----
Q 009914 155 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDG-GTANSDQVS-------S---KSFR----SDVKVL----- 214 (522)
Q Consensus 155 ~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~---~~~~----~~~~~~----- 214 (522)
.. ...|++.+.+..+++++..+...++||+|++.-. +++.++.++ . +... ++.++.
T Consensus 178 Gt----~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~ 253 (485)
T KOG0569|consen 178 GT----EDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKK 253 (485)
T ss_pred CC----CcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccc
Confidence 22 1579999999999999999999999999998654 222111100 0 0000 000000
Q ss_pred -HHHhhhhhcchhHHH-----HHHHhhhcc-chhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhh
Q 009914 215 -IQEAKSVIKIPSFQI-----IVAQGVTGS-FPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLS 287 (522)
Q Consensus 215 -~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 287 (522)
....+++++++..+. +.+...... ..+....|...++++.|++..++.+.....++..++.++++.++.||+|
T Consensus 254 ~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~g 333 (485)
T KOG0569|consen 254 KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLG 333 (485)
T ss_pred cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 011234555543332 222222222 2345566777888899999999999999999999999999999999999
Q ss_pred hcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchh--HHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHH
Q 009914 288 ARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP--VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAM 365 (522)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 365 (522)
||+ +++..........+..............+ +..+.+.++..++.+....|+.+-+.+|++|++.|..+.++
T Consensus 334 RRp-----Lll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~ 408 (485)
T KOG0569|consen 334 RRP-----LLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSV 408 (485)
T ss_pred CcH-----HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHH
Confidence 984 44433322222222222211111111111 22234555555555555444789999999999999999999
Q ss_pred HHHHHHHHhchhhHHHHHHHHHhhCcccCCCCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccHH
Q 009914 366 DRSFESILSSFAPPVVGILAQHVYGFKPIPKGSSATEEIATDRANAASLAKALYTAIGIPMALCCFIYSFLYSTYPRDRE 445 (522)
Q Consensus 366 ~~~~~~~~~~i~~~~~g~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (522)
...++.+..++.....-.+.+..++| . +.+..+.+++...+.+++.|++|+
T Consensus 409 ~~~~~w~~~fiv~~~fp~l~~~~g~~--------------------------~---filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 409 ATAVNWLSNFIVGFAFPPLQNVIGPY--------------------------V---FILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcch--------------------------h---hHHHHHHHHHHHHHHHHhCcccCC
Confidence 99999999999988888888884222 1 334444566667778888999987
Q ss_pred HHHHH
Q 009914 446 RARME 450 (522)
Q Consensus 446 ~~~~~ 450 (522)
+...+
T Consensus 460 r~~~e 464 (485)
T KOG0569|consen 460 RTPYE 464 (485)
T ss_pred CCHHH
Confidence 76544
No 77
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.3e-28 Score=237.86 Aligned_cols=277 Identities=19% Similarity=0.246 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHHHhhhh-hhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 009914 9 VLVNLAGIMERADESLL-PGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFL 87 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~ 87 (522)
..++..++....+...+ ...+..+.++.+....+.+.+.+++.++++++.+++|.+.||++..+.+....+++++..++
T Consensus 48 ~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~ 127 (495)
T KOG2533|consen 48 PFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFL 127 (495)
T ss_pred HHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 33444444444444332 22233355888999999999999999999999999999999999999999999999888888
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc-ccCCCCchH
Q 009914 88 VAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT-FMGIPGWRI 166 (522)
Q Consensus 88 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~-~~~~~gw~~ 166 (522)
.....|++.+++.|++.|+.++..+|....+++.|+.+++|++.++++.+..++|.++|.+++..+.... .....||||
T Consensus 128 ~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~ 207 (495)
T KOG2533|consen 128 TAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRW 207 (495)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCcee
Confidence 8889999999999999999999999999999999999999999999999999999999999999865422 123489999
Q ss_pred HHHHHHHHHHHHHHhhhh-ccCCCCCCCCCCCCC--------cccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhc
Q 009914 167 SFHIVGLISVVVGTLVRL-FANDPHFPDGGTANS--------DQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTG 237 (522)
Q Consensus 167 ~f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (522)
.|++.|+++++..++.++ +|.+|....-.++++ ++.......+ +......++.+++|..|.+.+..++.
T Consensus 208 ~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~dp~vw~~~l~~~~~ 285 (495)
T KOG2533|consen 208 LFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIEN--KFKWKGFKEALKDPGVWPFSLCYFFL 285 (495)
T ss_pred ehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCccc--ccCHHHHHHHHhchhHHHHHHHHHHH
Confidence 999999999999988877 566665322111111 0000000000 13345667788899998887776666
Q ss_pred cc-hhHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhh
Q 009914 238 SF-PWSALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLS 287 (522)
Q Consensus 238 ~~-~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 287 (522)
.. .++..+|+|.|+++ .|++..+++.+.....++++++.+++|+++||.+
T Consensus 286 ~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 286 KLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred hhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 66 46788999999987 6799999999999999999999999999999953
No 78
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=3.2e-27 Score=228.34 Aligned_cols=325 Identities=15% Similarity=0.147 Sum_probs=233.5
Q ss_pred hhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHh-----chhHH-HHHHHHHHHHHHHHHHhh---h
Q 009914 22 ESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRH-----NRAHV-IALGAFLWAAATFLVAFS---S 92 (522)
Q Consensus 22 ~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-----grr~~-l~~~~~~~~~~~~~~~~~---~ 92 (522)
.....+.+|.+.+++|+|.+++|++... .+...+ .+++|+++||+ ||||. ++.+.++.++..+.+++. .
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 3456788999999999999999999755 555555 99999999998 88886 567777777777777776 4
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC--------c
Q 009914 93 TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG--------W 164 (522)
Q Consensus 93 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g--------w 164 (522)
+++.+....++.+++.+...++..+++.|++|+|+|+++.++...+..+|.++++.+++.+... .+ |
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~-----~g~~~~~~~~w 156 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP-----EFANTGLITLW 156 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh-----ccccccccccc
Confidence 5666777888889998999999999999999999999999999999999999999999988876 45 9
Q ss_pred hHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchh---HHHHHHHhhhccc-h
Q 009914 165 RISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPS---FQIIVAQGVTGSF-P 240 (522)
Q Consensus 165 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~ 240 (522)
|.+|++.++..++..+..++..+|++..+++ ++ +.. ++..+..+.+++++. ++......+.... .
T Consensus 157 r~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~----~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (356)
T TIGR00901 157 GYIFFWTALLILPGLLVTLFLAKEPQEDASV----PK----PLT---QAVLKPIREFFQRKNMIQALLLLLLIVLYKLGD 225 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCccccc----ch----hHH---HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 9999999988777666555544444321110 00 001 112233445555553 4444433333333 4
Q ss_pred hHHHHHHHHHHHHhCCChhHHHHHHHHHH-HHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCC
Q 009914 241 WSALSFAAMWLELTGFSHEKTAFLMALFV-IASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPD 319 (522)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (522)
+...++.|.|++++|++..+.+.+....+ ++.+++.++++++.||+++|+ .+... ..+..+......+.....
T Consensus 226 ~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~-----~l~~~-~~~~~~~~~~~~~~~~~~ 299 (356)
T TIGR00901 226 SAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY-----ALLLF-GIVQALTNAGFVWLASNG 299 (356)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH-----HHHHH-HHHHHHHHHHHHHHHhcC
Confidence 45667899999889999999998888766 577899999999999999874 22221 122222111111111010
Q ss_pred C-----CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHH
Q 009914 320 D-----PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFES 371 (522)
Q Consensus 320 ~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (522)
. .+..+....+.++.+++.+...+ ...+++.|.+|+++||+.+|+.++..+
T Consensus 300 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 300 HHDGITFPHLLMLFLTITLEAVTGGLGTV-AFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cccccccchHHHHHHHHHHHHHHhHHHHH-HHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 0 02334455566677888887778 889999999999999999999987654
No 79
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.96 E-value=2.9e-26 Score=228.00 Aligned_cols=378 Identities=12% Similarity=0.058 Sum_probs=253.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHH-Hh--cCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH-hchhHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVG-AA--LHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR-HNRAHVIALGAF 79 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~grr~~l~~~~~ 79 (522)
..+.+..+.+..+...+..+...+.+|.+. ++ +|.+..+.|++.+.+.++..++++++|+++|| +|||+++.++.+
T Consensus 8 ~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~ 87 (475)
T TIGR00924 8 HPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGI 87 (475)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHH
Confidence 446677777888888888877777777665 44 89999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 80 LWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSN---RGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
+.+++.++++++++++.+++.|++.|++.|...+...+++++++|+++ |++++++.+.+.++|.++||.+++++.+.
T Consensus 88 ~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~ 167 (475)
T TIGR00924 88 VLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN 167 (475)
T ss_pred HHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999888899999999999999999999999999998754 88899999999999999999999999887
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCC-Ccccccchhhh-------------------hhH----
Q 009914 157 TFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTAN-SDQVSSKSFRS-------------------DVK---- 212 (522)
Q Consensus 157 ~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------------------~~~---- 212 (522)
.||++.|.+.++..++..+...+..+..+..+.+++. ++++.+..... ...
T Consensus 168 -----~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (475)
T TIGR00924 168 -----YGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANIL 242 (475)
T ss_pred -----cChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 7999999998865555443333333221111100000 00000000000 000
Q ss_pred --------------HHHH-Hhhhhhcch--hHHHHHHHhhhccchhH-HHHHHHHHHHH-hCCCh----hHHHHHHHHHH
Q 009914 213 --------------VLIQ-EAKSVIKIP--SFQIIVAQGVTGSFPWS-ALSFAAMWLEL-TGFSH----EKTAFLMALFV 269 (522)
Q Consensus 213 --------------~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~g~~~----~~~~~~~~~~~ 269 (522)
...+ .....-+++ .+..+.+........+. ..+.++.+.++ .+.+. ...+++.++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~ 322 (475)
T TIGR00924 243 LMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNP 322 (475)
T ss_pred HHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhH
Confidence 0000 000011111 22222332223333332 23345666643 33221 12668888888
Q ss_pred HHHhccchhhhhhhhHhhhcCCCchhHH---HHHHHHHHHHHHHHHHH-HhCCCCCchhHHHHHHHHHHHHHHhccCCCc
Q 009914 270 IASSLGGLFGGRMGDFLSARFPNSGRII---LAQISSLSAIPLAALLL-LVLPDDPSTPVMHGLVLVVTGLFISWNAPAT 345 (522)
Q Consensus 270 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 345 (522)
+..++..++..++..|.++|........ ...+...+++....+.. ........+.++.....++.+++.....| .
T Consensus 323 ~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p-~ 401 (475)
T TIGR00924 323 FWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISP-L 401 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhH-H
Confidence 8888877776666566655421111122 22222111211111110 11111134556677889999999999999 9
Q ss_pred chhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 346 NNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
..+++.+..|++.||+++|+......+|..+++.+.....+.
T Consensus 402 ~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~ 443 (475)
T TIGR00924 402 GLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP 443 (475)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999988888888888887766554
No 80
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=2.8e-27 Score=235.52 Aligned_cols=342 Identities=16% Similarity=0.170 Sum_probs=241.9
Q ss_pred hhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH----hchhH-HHHHHHHHHHHHHHHHHhhhh------H
Q 009914 26 PGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR----HNRAH-VIALGAFLWAAATFLVAFSST------F 94 (522)
Q Consensus 26 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr----~grr~-~l~~~~~~~~~~~~~~~~~~~------~ 94 (522)
..+.+++.+++|+++.++|++.++..+..++.+|+.|+++|| +|||| .++.+....+++.+++.+.++ .
T Consensus 20 ~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 20 TYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 446667888999999999999999999999999999999998 67744 577888888888888777653 4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhcc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cCCCCchHHHHHH
Q 009914 95 AQVAISRALNGIGLALVAPAIQSLVADST-DDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTF--MGIPGWRISFHIV 171 (522)
Q Consensus 95 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~--~~~~gw~~~f~~~ 171 (522)
..+++.+++.+++.+...++..++..+.. ++++|++..++.+.+..+|.++++.+.+.+..... ....+||+.+++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 56677888899998888888889999987 46889999999999999998888777666553210 1236899999999
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchhHH-HHHHHHH
Q 009914 172 GLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSA-LSFAAMW 250 (522)
Q Consensus 172 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 250 (522)
+++.++..++.++..+|++...+++ ++++ .+..+..+.++++|.++..+...++....+.. ..+.+.|
T Consensus 180 ~~l~~~~~~~~~~~~~e~~~~~~~~----~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERYSEIPKN----IEKK-------LSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYY 248 (437)
T ss_pred HHHHHHHHHHHHcCCEecCCCCCcc----cccC-------CCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhhee
Confidence 9888888776665444432111100 0001 01223455677888887766555544443322 2344455
Q ss_pred HHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHH
Q 009914 251 LEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGL 329 (522)
Q Consensus 251 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (522)
.+. ++ +....+.+..+..++.+++.++.+++.||+++|+ ...... .+..+. ...+.... +..+...+
T Consensus 249 ~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~-----~~~~~~-~~~~~~--~~~~~~~~---~~~~~~~~ 316 (437)
T TIGR00792 249 FTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI-----LFAGGI-LLMVLG--YLIFFFAG---SNLPLILV 316 (437)
T ss_pred EeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-----HHHHHH-HHHHHH--HHHHHHcc---hhHHHHHH
Confidence 543 44 5566777777888999999999999999999873 332221 111111 11111111 22333455
Q ss_pred HHHHHHHHHhccCCCcchhhhhhhcC-------cchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcc
Q 009914 330 VLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 330 ~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~ 392 (522)
..++.|++.+...+ ..++++.|..| ++.+|+++|+.+....++..+++.+.|.+.+. .||.
T Consensus 317 ~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~-~G~~ 384 (437)
T TIGR00792 317 LIILAGFGQNFVTG-LVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI-IGYV 384 (437)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC
Confidence 66677777777666 67888888765 56689999999999999999999999999998 7875
No 81
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=1.9e-26 Score=226.07 Aligned_cols=356 Identities=9% Similarity=0.021 Sum_probs=240.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHH-HHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH
Q 009914 7 TLVLVNLAGIMERADESLLPGVYKEV-GAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT 85 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~ 85 (522)
.++.+...+++.......+.+.+|.+ .+++|.++.+.|++.+++.++..++++++|+++||+|||+.++.+....+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~ 82 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLF 82 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 34556667777777777777777755 56799999999999999999999999999999999999999988776665544
Q ss_pred HHHH---hhh-----hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009914 86 FLVA---FSS-----TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT 157 (522)
Q Consensus 86 ~~~~---~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~ 157 (522)
.... +.+ .+..+++.+++.|++.+...+...++..+..+ +++..++......++|.++||++++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-- 158 (396)
T TIGR00882 83 APFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS-- 158 (396)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc--
Confidence 3221 111 23345667888899888888888888777532 34567788888899999999999998865
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhc
Q 009914 158 FMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTG 237 (522)
Q Consensus 158 ~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (522)
.+|+.+|++.+++.++..++.+...++++.++.+++..+.+.++ +..++.++.+|+|.++.++...+..
T Consensus 159 ----~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~l~~~~~ 227 (396)
T TIGR00882 159 ----IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASA-------FSLKLALELFRQRKFWMFVLYVVGV 227 (396)
T ss_pred ----cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCC-------CCHHHHHHHHcCCcHHHHHHHHHHH
Confidence 59999999998888877766655444432211111000000000 1112345667788776554444333
Q ss_pred cchh-HHHHHHHHHHHHh----CCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHH
Q 009914 238 SFPW-SALSFAAMWLELT----GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 312 (522)
Q Consensus 238 ~~~~-~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (522)
...+ ....+.+.|+++. +.+....+...+...+...++.+..+++.||+++|+ .+.... .+.++ ...
T Consensus 228 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~-----~l~~~~-~l~~l--~~~ 299 (396)
T TIGR00882 228 ACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN-----ALLIAG-TIMSV--RII 299 (396)
T ss_pred HHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-----hHHHHH-HHHHH--HHH
Confidence 3322 3334677777653 455667888888888899999999999999999984 222211 11111 111
Q ss_pred HHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHH-HHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 313 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAM-DRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
. ... .. +.+.+....++.|++...... ....+..+..|++.+++..+. .+....+++.++|.+.|++.|. .||
T Consensus 300 ~-~~~--~~-~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~-~G~ 373 (396)
T TIGR00882 300 G-SSF--AT-TALEVVILKMLHAFEVPFLLV-GCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS-IGF 373 (396)
T ss_pred H-HHh--cC-ChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh-ccc
Confidence 1 111 12 233344556666766554443 345566777788888887766 6778899999999999999998 576
No 82
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.6e-27 Score=234.69 Aligned_cols=373 Identities=17% Similarity=0.202 Sum_probs=286.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAA 84 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~ 84 (522)
|.+.+..++......-....++.+.+.+.++++.+..+++|+.++......+..|+.+.+.||+|.|.+.++|.++.+++
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g 124 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALG 124 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 44555555666666556667788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHH-HHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC
Q 009914 85 TFLVAFSSTFAQVAI-SRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG 163 (522)
Q Consensus 85 ~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g 163 (522)
.++..+++++|.+++ .-++.|+|.++.+.+...++..+| +++|+.++|+...+.++|.++-|.+...+.+. +|
T Consensus 125 ~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~-----~G 198 (509)
T KOG2504|consen 125 LLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSK-----YG 198 (509)
T ss_pred HHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHH-----hC
Confidence 999999999988876 568899999999999999999888 46799999999999999999999999999998 99
Q ss_pred chHHHHHHHHHHHHHHHhhhhccCCCCCC-CC--------------------CCCC--Ccccc------------cchhh
Q 009914 164 WRISFHIVGLISVVVGTLVRLFANDPHFP-DG--------------------GTAN--SDQVS------------SKSFR 208 (522)
Q Consensus 164 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~-~~--------------------~~~~--~~~~~------------~~~~~ 208 (522)
||+.+++.+.+.+-..+......+.+... +. .... +.... .++.+
T Consensus 199 ~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (509)
T KOG2504|consen 199 WRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKW 278 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccc
Confidence 99999999988877666665544311110 00 0000 00000 00000
Q ss_pred h--hhHHHH-HHhhhhhcchhHHHHHHHhhhccch-hHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhh
Q 009914 209 S--DVKVLI-QEAKSVIKIPSFQIIVAQGVTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGD 284 (522)
Q Consensus 209 ~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 284 (522)
. ..+... .....+++++.++.+.....+.... +....++|.|.+..|++..+++.+.++.++..++++++.|++.|
T Consensus 279 ~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD 358 (509)
T KOG2504|consen 279 RNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLAD 358 (509)
T ss_pred cccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcC
Confidence 0 011111 1124678889998887777776664 44556799999999999999999999999999999999999999
Q ss_pred HhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHH
Q 009914 285 FLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYA 364 (522)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (522)
+...++ .....++++.... .....+.. ...+.+.....++|+..+.... ....++.|+++.++-..++|
T Consensus 359 ~~~~~~-----~~~~~~~ll~~gl----~~~~~p~~-~~~~~l~~~~~~fG~~~g~~~~-l~~~i~~~~~g~~~l~~a~G 427 (509)
T KOG2504|consen 359 KPGIRA-----LVLFLLTLLIAGL----ARLFLPFA-TTYVGLIVFSILFGFCVGSFSS-LTPVILVDLVGLEKLSNAYG 427 (509)
T ss_pred ccccch-----HHHHHHHHHHHHH----HHHHHHHh-ccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcChhhcchHHH
Confidence 988542 2222222222211 11222222 3335577788888998888777 66679999999999999999
Q ss_pred HHHHHHHHHhchhhHHHHHHHHHhhCcccC
Q 009914 365 MDRSFESILSSFAPPVVGILAQHVYGFKPI 394 (522)
Q Consensus 365 ~~~~~~~~~~~i~~~~~g~l~~~~~g~~~~ 394 (522)
+...++.++..+||++.|++.|....|...
T Consensus 428 l~l~~~gi~~l~gpPiag~~~d~tg~Y~~~ 457 (509)
T KOG2504|consen 428 LLLLFQGIGALVGPPIAGLLYDITGNYDHA 457 (509)
T ss_pred HHHHHhHHHHHcCcccceeeeeccCCeeee
Confidence 999999999999999999999996557543
No 83
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.96 E-value=4.6e-27 Score=239.89 Aligned_cols=282 Identities=18% Similarity=0.251 Sum_probs=223.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFL 87 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~ 87 (522)
++.+.+..+...+.....+..++.+.++++++.++.|++.+.+.++++++.++.|++.||+|||+++.++.++++++.++
T Consensus 35 ~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll 114 (633)
T TIGR00805 35 SLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFL 114 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHH
Confidence 34555567777777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhh---------------------------------------------------hHHHHHHHHHHHHHHhhhhHHHHH
Q 009914 88 VAFSS---------------------------------------------------TFAQVAISRALNGIGLALVAPAIQ 116 (522)
Q Consensus 88 ~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~ 116 (522)
+++.+ .+..++++|+++|+|.+..++...
T Consensus 115 ~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~ 194 (633)
T TIGR00805 115 LSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGI 194 (633)
T ss_pred HhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCc
Confidence 88763 245678899999999999999999
Q ss_pred HHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccc----------------CC-CCchHHHHHHHHHHHHHH
Q 009914 117 SLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFM----------------GI-PGWRISFHIVGLISVVVG 179 (522)
Q Consensus 117 ~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~----------------~~-~gw~~~f~~~~~~~~i~~ 179 (522)
+++.|++|+++|++++++......+|.++|+++++++.+.... .. .+|+..|++.+++.++..
T Consensus 195 ~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~ 274 (633)
T TIGR00805 195 SYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS 274 (633)
T ss_pred hhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998754200 00 137888999998888877
Q ss_pred HhhhhccCCCCCCCC-CC-C-CCcc---c-cc---chhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHHHH
Q 009914 180 TLVRLFANDPHFPDG-GT-A-NSDQ---V-SS---KSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSFAA 248 (522)
Q Consensus 180 ~~~~~~~~~~~~~~~-~~-~-~~~~---~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 248 (522)
+..++++++.+.... .+ + .+++ + .+ .......++..+..+.++++|.++...+..+.... .++..+|+|
T Consensus 275 v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP 354 (633)
T TIGR00805 275 IPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLP 354 (633)
T ss_pred HHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776677765332211 00 0 0000 0 00 00111234455667789999999888766665555 466778999
Q ss_pred HHHH-HhCCChhHHHHHHHHHHH-HHhccchhhhhhhhHhhhc
Q 009914 249 MWLE-LTGFSHEKTAFLMALFVI-ASSLGGLFGGRMGDFLSAR 289 (522)
Q Consensus 249 ~~~~-~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~~~~~~~ 289 (522)
.|++ ++|+++.+++++.....+ +.+++.+++|+++||++.+
T Consensus 355 ~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 355 KYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 9997 599999999999988776 5688999999999999855
No 84
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.96 E-value=1.4e-25 Score=219.38 Aligned_cols=356 Identities=12% Similarity=0.031 Sum_probs=246.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHH--HHHHHHHHHhhhhhHHH-HHHHhchhHHHHHHHHH-HHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSL--TLFRSIVQASCYPIAAY-LAIRHNRAHVIALGAFL-WAA 83 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~--~s~~~~~~~i~~~~~G~-l~Dr~grr~~l~~~~~~-~~~ 83 (522)
+..+...++.+++..+...+.+|.+.++.|.|.+++|++ .++..+...+.+|+++. ..||+||||..++...+ .++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 566777889999999999999999999999999999997 46678888888888854 78999998886555433 222
Q ss_pred HHHHHH-h--hhh-HHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009914 84 ATFLVA-F--SST-FAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFM 159 (522)
Q Consensus 84 ~~~~~~-~--~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~ 159 (522)
.....+ + ..+ ...++...++.++..+...+...++..|..++++++...+....+..+|.++|+.+.+++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~--- 159 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK--- 159 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 222222 1 222 333444556666777888888888999998888888899999999999999999999998887
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc
Q 009914 160 GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF 239 (522)
Q Consensus 160 ~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (522)
.|||.+|++.+++.++..+..++++++++.+++ + + +...+..++.+|+|.++..+...+....
T Consensus 160 --~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~-~----~----------~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 222 (390)
T TIGR02718 160 --FGQRPAFLLVACVPLASLVCVLWLKDRAVASPE-A----P----------LARRASLFRFFRRPLAWSLLALALLSAM 222 (390)
T ss_pred --hCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccc-c----c----------hhhHHHHHHHHcCcCHHHHHHHHHHHHH
Confidence 899999999998887777666555543321110 0 0 0111234556777776655544444443
Q ss_pred -hhHHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 009914 240 -PWSALSFAAMWLELTGFSHEKTAFLMALFVI-ASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVL 317 (522)
Q Consensus 240 -~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (522)
......+.+.|+++.|+++++.|.+....++ ..+++.++.|++.||+++++ .+...........+........
T Consensus 223 ~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~-----~l~~~~~~~~~~~~~~~~~~~~ 297 (390)
T TIGR02718 223 TAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR-----TFILGVGLAGSLALLWFAQAAF 297 (390)
T ss_pred HHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHHHHHc
Confidence 3455667888998899999999999888764 66677899999999999883 3332221111111111111111
Q ss_pred CCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCc-chhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 318 PDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPE-KSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 318 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
.. ............+.++..+...+ ...+...+..++ +.+++.+++.+...+++..++|.+.|.+.|. .||
T Consensus 298 ~~-~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~-~G~ 369 (390)
T TIGR02718 298 WL-APGIAVAWSCSAFGSLITGITSV-AIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR-FGY 369 (390)
T ss_pred cc-CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hcc
Confidence 11 11122222333344445555555 566666677665 8899999999999999999999999999998 565
No 85
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.8e-25 Score=200.31 Aligned_cols=338 Identities=16% Similarity=0.169 Sum_probs=265.3
Q ss_pred HHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 009914 19 RADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVA 98 (522)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 98 (522)
--.....+++++.+.+++|+|.+..|++.++..+...+.+++..++..|+|.++.+..++++.+++.++-... +.+.++
T Consensus 25 R~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~ 103 (395)
T COG2807 25 RPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLF 103 (395)
T ss_pred chhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHH
Confidence 3344668899999999999999999999999999999999999999999999999999999999999998877 788899
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHH
Q 009914 99 ISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVV 178 (522)
Q Consensus 99 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~ 178 (522)
.+-.+.|.+.+...+...+++.+.+|+ +-+..++++....++|..+++.+...+.++. .+||....+.+.++++.
T Consensus 104 ~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~----~gW~~aL~~WAl~allA 178 (395)
T COG2807 104 LGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHS----GGWRGALGFWALLALLA 178 (395)
T ss_pred HHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHhh----ccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999975 4799999999999999999999999998872 48999999999988887
Q ss_pred HHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhc-cchhHHHHHHHHHHHHhCCC
Q 009914 179 GTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTG-SFPWSALSFAAMWLELTGFS 257 (522)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ 257 (522)
.+.++.-...++....+. .......++|+|.-|.+.+.+-.. ..+|..+.|+|.++.+.|+|
T Consensus 179 l~~WlPq~~r~~~~~~~~-----------------~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~s 241 (395)
T COG2807 179 LLIWLPQALREQAASIAT-----------------KLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLS 241 (395)
T ss_pred HHHHhhhccccccccccc-----------------ccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC
Confidence 776543221111111100 001123467888766665554444 44788899999999999999
Q ss_pred hhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHH
Q 009914 258 HEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLF 337 (522)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 337 (522)
+.++|.+.++..+.++..++....+.+|.+.++ .+..............+. ..+. ..++.. .+++|++
T Consensus 242 a~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r-----~~~~~~~~~~l~G~~G~~--~~P~---~~~~lw--~~llG~G 309 (395)
T COG2807 242 AAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR-----PLVVLALLLMLVGLVGLL--LAPG---QLPILW--ALLLGLG 309 (395)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc-----hHHHHHHHHHHHHHHHHH--Hhhh---hHHHHH--HHHHhCc
Confidence 999999999999999999999999999876664 233322222222222222 2222 222122 5788998
Q ss_pred HhccCCCcchhhhhhhc-CcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcc
Q 009914 338 ISWNAPATNNPIFAEIV-PEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 338 ~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~ 392 (522)
.+..++ .....+.+.. .++..++-.|+.+.++++..++||.+.|++.|...+|.
T Consensus 310 ~G~~F~-laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~ 364 (395)
T COG2807 310 QGGAFP-LALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWS 364 (395)
T ss_pred cchHHH-HHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChH
Confidence 888888 6666665554 55777888999999999999999999999999976663
No 86
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=6.1e-26 Score=252.52 Aligned_cols=361 Identities=14% Similarity=0.088 Sum_probs=250.4
Q ss_pred HHHHHHHHHHHHHHHHh-hhhhhHHHHHHHhcCCCh--hhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADE-SLLPGVYKEVGAALHTDP--TGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~--~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
+.+..++++.++..+.. .....+.+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++.+
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~ 88 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEV 88 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHH
Confidence 34444555555544443 444555566666677654 447999999999999999999999999999999998887766
Q ss_pred HHHHHHH---hhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc--
Q 009914 83 AATFLVA---FSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT-- 157 (522)
Q Consensus 83 ~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~-- 157 (522)
+..++.. ..++++.++++|+++|++.+...++..+++.|++|+++|++++++...+.++|.++|+++++++....
T Consensus 89 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~ 168 (1146)
T PRK08633 89 GLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNG 168 (1146)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5555443 34689999999999999999999999999999999999999999999999999999999999987530
Q ss_pred --ccCCCCchHHHHHHHHHHHHHH-HhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHh
Q 009914 158 --FMGIPGWRISFHIVGLISVVVG-TLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 234 (522)
Q Consensus 158 --~~~~~gw~~~f~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (522)
.....+|++.+.+..+...+.. ++.+.+++.++......+ + .. ....+...+.++.+++++.++..++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~ 241 (1146)
T PRK08633 169 NTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFD--K--KK---YLFPKLLWRNLKLLRSDRVLWLAIIGL 241 (1146)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCccccc--c--cc---cccHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 0001244454444443333333 333334443332211110 0 00 011133344566677888777665544
Q ss_pred hhccc-hhHHHHHHHHHHH-HhCCChh-HHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHH
Q 009914 235 VTGSF-PWSALSFAAMWLE-LTGFSHE-KTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 311 (522)
Q Consensus 235 ~~~~~-~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (522)
++... .+....++|.|++ .+|++.. ..+++.+...++.+++.++.+++.||+++++. +... .++.++ ..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~-----~~~~-~~~~~~--~~ 313 (1146)
T PRK08633 242 SYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGL-----VPLG-ALGLAL--SL 313 (1146)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccc-----hhHH-HHHHHH--HH
Confidence 44333 3445567888886 5899988 99999999999999999999999999887742 2111 111111 11
Q ss_pred HHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 009914 312 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 386 (522)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~ 386 (522)
+.+. . ..+.+...+..++.|++.+...+ ...+++.+..|++.||+++|+.+++..++..+++.+++.+..
T Consensus 314 ~~~~-~---~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 314 FLLP-T---APSLASVLVLFFLFGFSAGLFIV-PLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHH-H---hhhHHHHHHHHHHHHHHHHHhhH-HHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1 12344455677788888887777 678999999999999999999999999998888777766554
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=1.1e-25 Score=223.73 Aligned_cols=375 Identities=13% Similarity=0.059 Sum_probs=247.9
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhh-hHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH-hchhHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLP-GVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR-HNRAHVIALGAFL 80 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~grr~~l~~~~~~ 80 (522)
+.++.++.+++..+...+..+... .+..++.+++|.+.++.+++.+.+.....+..+++|+++|| +||||+++++.++
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 456777777778888777776554 45556678899999999999999998888899999999999 9999999999999
Q ss_pred HHHHHHHHHhhhhHHH-HHHHHHHHHHHhhhhHHHHHHHHhhccCCC--chhHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009914 81 WAAATFLVAFSSTFAQ-VAISRALNGIGLALVAPAIQSLVADSTDDS--NRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT 157 (522)
Q Consensus 81 ~~~~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~ 157 (522)
++++.++++++++... ++++|+++|+|.|...|...+++.|.+|++ +|+++++++..+.++|..+||.+++++.+.
T Consensus 91 ~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~- 169 (489)
T PRK10207 91 LAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK- 169 (489)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 9999999998876444 558999999999999999999999999876 457799999999999999999999999988
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHhhhh-ccCCCCCCCCCCCCCcccccchh----------------hh--hhHH-----
Q 009914 158 FMGIPGWRISFHIVGLISVVVGTLVRL-FANDPHFPDGGTANSDQVSSKSF----------------RS--DVKV----- 213 (522)
Q Consensus 158 ~~~~~gw~~~f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------------~~--~~~~----- 213 (522)
.|||+.|++.++. ++..++.+. ..+..+....+.++++.+..... .+ ....
T Consensus 170 ----~gw~~~F~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (489)
T PRK10207 170 ----FGYSVTYNLCGAG-LIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIV 244 (489)
T ss_pred ----hChHHHHHHHHHH-HHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 8999999997553 333333333 22111111000000000000000 00 0000
Q ss_pred ---------HH--HHhhhhhcchhHHHHHHH--hhhccchhHH-HHHHHHHHHH-hCCCh----hHHHHHHHHHHHHHhc
Q 009914 214 ---------LI--QEAKSVIKIPSFQIIVAQ--GVTGSFPWSA-LSFAAMWLEL-TGFSH----EKTAFLMALFVIASSL 274 (522)
Q Consensus 214 ---------~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~-~g~~~----~~~~~~~~~~~~~~~~ 274 (522)
.. ...++.+|+|.+....+. .......+.. .+.++.+.++ .+.+. .....+..+..+..++
T Consensus 245 ~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii 324 (489)
T PRK10207 245 LSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVV 324 (489)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHH
Confidence 00 011234555555443322 2222222322 2456677653 22211 1234455555566767
Q ss_pred cchhhhhhhhHhhhcCCCchhHHHHHHHHHH-HHHHHHH--H--HHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhh
Q 009914 275 GGLFGGRMGDFLSARFPNSGRIILAQISSLS-AIPLAAL--L--LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPI 349 (522)
Q Consensus 275 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 349 (522)
.+++.+++.||+++|+..........++.++ ++..... . .........+.++.....++.|++.....+ ...+.
T Consensus 325 ~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~-~g~~~ 403 (489)
T PRK10207 325 ASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISA-LGLAM 403 (489)
T ss_pred HHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhH-HHHHH
Confidence 7888899999999885311111122221111 1111111 0 111111122344466788899999999999 88999
Q ss_pred hhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHH
Q 009914 350 FAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGIL 384 (522)
Q Consensus 350 ~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l 384 (522)
+.+..|++.++.++|+.+...++|+.++..+.+..
T Consensus 404 ~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 404 IAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999888887776654
No 88
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1.5e-27 Score=215.22 Aligned_cols=327 Identities=19% Similarity=0.216 Sum_probs=243.5
Q ss_pred HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHH
Q 009914 34 AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAP 113 (522)
Q Consensus 34 ~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 113 (522)
++++.+.+++|++++...+.+.+.+++.|.+.||+|+|..+++|+..+.++++++++..+++.++++|.+||+|.++...
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 45667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCC-chhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCC
Q 009914 114 AIQSLVADSTDDS-NRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFP 192 (522)
Q Consensus 114 ~~~~~i~~~~~~~-~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 192 (522)
+..++++|.+|++ +|++++|+...+.++|.++||++||.+++. .|.+.+|++.+++.++-..+.++..+..+..
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~-----~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF-----AGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh-----cCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 9999999999875 589999999999999999999999999998 8999999999999999888887766432222
Q ss_pred CCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchhHHH-HHHHHHH-HHhCCChhHHHHHHHHHHH
Q 009914 193 DGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWL-ELTGFSHEKTAFLMALFVI 270 (522)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~g~~~~~~~~~~~~~~~ 270 (522)
.... ++ ...+++++++|.++.............++. ..++.+. +.+..+..+.|..+....+
T Consensus 254 ~~~~---~~-------------~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~ 317 (464)
T KOG3764|consen 254 PDST---EQ-------------GTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASL 317 (464)
T ss_pred cccc---cc-------------CccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeeccccc
Confidence 2111 00 023445677887777665554444433332 3456655 4566556688999999999
Q ss_pred HHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCC--Ccchh
Q 009914 271 ASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAP--ATNNP 348 (522)
Q Consensus 271 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~ 348 (522)
...++..+.|.+.||++..+ ......+..+ ..+.....+.... +.-+++..+..+++.+.... .....
T Consensus 318 ~y~ig~~lfg~la~k~~~~~-----wl~~~~gl~~----~G~~~~~iP~~~~-~~~L~vp~~~l~~~i~~~dasl~P~l~ 387 (464)
T KOG3764|consen 318 SYAIGTNLFGKLADKYPHLR-----WLLSLGGLAT----VGVSSGPIPFATS-IAQLWVPNFGLGFGIGLADASLIPTLG 387 (464)
T ss_pred chhccCchHHHHHHhcCchh-----HHHHHHHHHH----HHHHhchhHhhhh-HHHHhhhhHHHHHHHHHHHHHHhhhhH
Confidence 99999999999999999652 2222222221 1122222222222 22133333333333332222 01344
Q ss_pred hhhhhcCcc---hhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcc
Q 009914 349 IFAEIVPEK---SRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 349 ~~~~~~~~~---~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~ 392 (522)
+..|....+ ..|.++++......++.++||.++|.+.+. .|+.
T Consensus 388 ~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~-iGF~ 433 (464)
T KOG3764|consen 388 YLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA-IGFE 433 (464)
T ss_pred HhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheee-hhHH
Confidence 444444444 678999999999999999999999999998 6763
No 89
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.95 E-value=9.4e-25 Score=218.22 Aligned_cols=373 Identities=13% Similarity=0.110 Sum_probs=245.3
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhhhh-HHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHH----Hhch-hHHHH
Q 009914 2 KQETVTLVLVNLAGIMERADESLLPG-VYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAI----RHNR-AHVIA 75 (522)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~D----r~gr-r~~l~ 75 (522)
+-..+..+...++.+...+......+ +..++.+.+|+++.++|.+..+..+..++..|+.|+++| |+|| |+.++
T Consensus 2 ~l~~~~~~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il 81 (473)
T PRK10429 2 SISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWIL 81 (473)
T ss_pred CCchhHHHhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHh
Confidence 33344444555666665555555554 455677788999999999999999999999999999999 5698 55677
Q ss_pred HHHHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHhhhhHHHHHHHHhhcc-CCCchhHHHHHHHHHHHHHHHHHHH
Q 009914 76 LGAFLWAAATFLVAFSST------FAQVAISRALNGIGLALVAPAIQSLVADST-DDSNRGVAFGWLQLTSNIGSLVGGL 148 (522)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lg~~~g~~ 148 (522)
++.+..+++.+++...++ +..+++..++.+++.+...++..++..|.. ++++|.+..++...+.++|..+.+.
T Consensus 82 ~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~ 161 (473)
T PRK10429 82 IGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAG 161 (473)
T ss_pred hhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887666654331 345566677888888999999999999998 5789999999988888888766665
Q ss_pred HHHhhhcccc--cCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchh
Q 009914 149 FSVVMAPMTF--MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPS 226 (522)
Q Consensus 149 l~~~l~~~~~--~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (522)
+...+..... ....+|+....+.+++.++..+..++..+|+......+. +++++ ....+..+.+++||.
T Consensus 162 ~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~~~-------~~~~~~~~~~~~n~~ 232 (473)
T PRK10429 162 FTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVS--AEGSH-------LTLKDIVALIYKNDQ 232 (473)
T ss_pred HHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccc--ccccC-------CCHHHHHHHHhcCHH
Confidence 5544332110 111367888777777777666665553333211111000 00001 112233445668888
Q ss_pred HHHHHHHhhhccchhHH-HHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHH
Q 009914 227 FQIIVAQGVTGSFPWSA-LSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLS 305 (522)
Q Consensus 227 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 305 (522)
++.++...+........ ..+.+.|.+....+....+.+.....++.+++.++.+++.||+|+|+ .+.......+
T Consensus 233 ~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~-----~~~~~~~~~~ 307 (473)
T PRK10429 233 LSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI-----LWAGASIFPV 307 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-----HHHHHHHHHH
Confidence 77776655555443333 33444444543335566677777777888999999999999999984 3332221111
Q ss_pred HHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcC-------cchhHHHHHHHHHHHHHHhchhh
Q 009914 306 AIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAP 378 (522)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~i~~ 378 (522)
+........... .+...+.+.+..++.|++.+.... ...++++|..+ .+..|..+|..+....++.++++
T Consensus 308 -~~~~~~~~~~~~-~~~~~~~~~i~~~l~g~~~~~~~~-~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~ 384 (473)
T PRK10429 308 -LSCGVLLLMGLA-APHNALLIVIAGILLNIGTALFWV-LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAA 384 (473)
T ss_pred -HHHHHHHHHhcc-CchhHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHH
Confidence 111111111111 123334445556667777776666 67888888865 45567799999999999999999
Q ss_pred HHHHHHHHHhhCcc
Q 009914 379 PVVGILAQHVYGFK 392 (522)
Q Consensus 379 ~~~g~l~~~~~g~~ 392 (522)
.+.|++.+. .||.
T Consensus 385 ~i~g~~l~~-~Gy~ 397 (473)
T PRK10429 385 FFIGVVLGL-IGYV 397 (473)
T ss_pred HHHHHHHHH-cCCC
Confidence 999999998 7885
No 90
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.95 E-value=2.2e-25 Score=210.36 Aligned_cols=341 Identities=9% Similarity=0.036 Sum_probs=237.9
Q ss_pred HhhhhhhHHHHHHHhcCCChhh-hHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 009914 21 DESLLPGVYKEVGAALHTDPTG-LGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAI 99 (522)
Q Consensus 21 ~~~~~~~~~~~~~~~~g~s~~~-~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 99 (522)
.+...+...|++.+++|+|.++ .|.+.+++..+++++.+++|.++||+|.|+++.++.+.+++.++++++++++..+.+
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHH---HHHHHH
Q 009914 100 SRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHI---VGLISV 176 (522)
Q Consensus 100 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~---~~~~~~ 176 (522)
.|++.|++.|... +...++..|+|+++|+++.++..++..+|.++++++++++. . .|||.-+.+ ......
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s-----~gWr~y~~Ln~Isl~s~~ 193 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-T-----LGWISYSTLNIISLVFMT 193 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-----cCchhHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999999944 4 688765443 333334
Q ss_pred HHHHhhhhccCCCCCC---CCC--------C-CCCccccc--c------hhhhhhHHHHHHhhhhhcchhHHHHHHHhhh
Q 009914 177 VVGTLVRLFANDPHFP---DGG--------T-ANSDQVSS--K------SFRSDVKVLIQEAKSVIKIPSFQIIVAQGVT 236 (522)
Q Consensus 177 i~~~~~~~~~~~~~~~---~~~--------~-~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (522)
+..++.+++|..++.. +.+ + +....++. . ......+..+.+.+...+++.++...+.-.+
T Consensus 194 ~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~ 273 (511)
T TIGR00806 194 FSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVF 273 (511)
T ss_pred HHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHH
Confidence 4445555565322210 000 0 00000000 0 0112234566677777788776655444444
Q ss_pred ccch-hHHHHHHHHHHHHhCC-ChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHH
Q 009914 237 GSFP-WSALSFAAMWLELTGF-SHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLL 314 (522)
Q Consensus 237 ~~~~-~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (522)
.... +-+.+|....-++..- .+...|..-++..+.+.+..+..|++-.++.+.. .+.+..++.+. +.+
T Consensus 274 a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~----~l~l~v~s~~~----~gl-- 343 (511)
T TIGR00806 274 NSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWS----KLLIAVVSAIQ----AGL-- 343 (511)
T ss_pred HhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhH----HHHHHHHHHHH----HHH--
Confidence 3332 3344454444443222 1225667777777888888888888755443221 11221111111 111
Q ss_pred HhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhH
Q 009914 315 LVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPP 379 (522)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~ 379 (522)
+......++.|+.++..++++..+.+..+ +...-+++....+..|...|+.+++.-+...+-..
T Consensus 344 l~~m~~t~~Iw~~Y~~yvlf~~~y~flit-ia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~ 407 (511)
T TIGR00806 344 VFWMSQSHDIWVLYVTYVLFRGIYQFLVP-IATFQIASSLSKELCALVFGINTFVATALKTIITA 407 (511)
T ss_pred hhhhhcccchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence 11222345666677888888888888877 66777777777777899999998877666555443
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=3.1e-26 Score=205.50 Aligned_cols=342 Identities=17% Similarity=0.150 Sum_probs=225.7
Q ss_pred CCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHH
Q 009914 37 HTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQ 116 (522)
Q Consensus 37 g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 116 (522)
+.+....|.+.+.+.+.+.+.++.+|.++||+|||++++++.+..++..++.+++.|+..++++|++.|+..|-.. ...
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~-v~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLS-VIR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchH-HHH
Confidence 3455678999999999999999999999999999999999999999999999999999777777999999977665 667
Q ss_pred HHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc-ccCCCCchHHHHHHHHHHHH-HHHhhhhccCCCCCCCC
Q 009914 117 SLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT-FMGIPGWRISFHIVGLISVV-VGTLVRLFANDPHFPDG 194 (522)
Q Consensus 117 ~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~-~~~~~gw~~~f~~~~~~~~i-~~~~~~~~~~~~~~~~~ 194 (522)
++++|.+++|+|+++++.+...+++|.++||.+|+++.... ..+.+-+-.+-++..++... ..++.++++|.-+.+++
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~ 222 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR 222 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence 99999999999999999999999999999999999998721 11222222222222222222 33444555554221111
Q ss_pred CCCCCcccccchhhhhh-HHHHHHhhhhhcchhHHH-------HHHHhhhccchhHHHHHHHHHH--HHhCCChhHHHHH
Q 009914 195 GTANSDQVSSKSFRSDV-KVLIQEAKSVIKIPSFQI-------IVAQGVTGSFPWSALSFAAMWL--ELTGFSHEKTAFL 264 (522)
Q Consensus 195 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~ 264 (522)
++++....+......+. +.........+|++.... +....+.+...+....+.+..+ ..+|+++.+.|.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~v 302 (451)
T KOG2615|consen 223 NDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKV 302 (451)
T ss_pred cccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheee
Confidence 11000000000000000 001111112233332222 2222222222333334445555 3589999999999
Q ss_pred HHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCC
Q 009914 265 MALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPA 344 (522)
Q Consensus 265 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 344 (522)
.+..++.+.+......+..+|.+... .......+.+.++.. .++... .....+.....+..+..+...+
T Consensus 303 l~~tGl~m~~~ql~~~~~l~~~~~~~-----~a~l~~~l~~~vP~~--llls~~---~~~~~l~~~s~l~sf~~A~~vt- 371 (451)
T KOG2615|consen 303 LSTTGLLMLVIQLALVPILPRYKGNI-----KAVLLFSLLLIVPAF--LLLSLA---RTPVVLYLGSTLKSFSTASVVT- 371 (451)
T ss_pred eehhhHHHHHHHHhccccccccccch-----hhHHHHHHHHHHHHH--HHHhcc---ccchhhhHHHHHHHHHHHHhhH-
Confidence 99999988887777776666655221 111112222222222 222211 2223456677777888887778
Q ss_pred cchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 345 TNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
....++....|++.||+.+|+..+.+.++.++||.+.|.+..+.-+
T Consensus 372 ~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~ 417 (451)
T KOG2615|consen 372 CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQG 417 (451)
T ss_pred HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecC
Confidence 8889999999999999999999999999999999999998877433
No 92
>PRK09669 putative symporter YagG; Provisional
Probab=99.94 E-value=2e-24 Score=214.67 Aligned_cols=359 Identities=13% Similarity=0.142 Sum_probs=241.0
Q ss_pred HHHHHHHHHHHHHHhhh-hhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH----hchh-HHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESL-LPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR----HNRA-HVIALGAFLW 81 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr----~grr-~~l~~~~~~~ 81 (522)
.+...++.+........ ...+..++.+.+|+|+.++|.+.++..+..++..|+.|+++|| +||| +.++.+.+..
T Consensus 11 ~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~ 90 (444)
T PRK09669 11 KIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPF 90 (444)
T ss_pred HHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHH
Confidence 33344444443333333 3455667888999999999999999999999999999999998 6764 5577787777
Q ss_pred HHHHHHHHhhhh------HHHHHHHHHHHHHHhhhhHHHHHHHHhhcc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009914 82 AAATFLVAFSST------FAQVAISRALNGIGLALVAPAIQSLVADST-DDSNRGVAFGWLQLTSNIGSLVGGLFSVVMA 154 (522)
Q Consensus 82 ~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~ 154 (522)
+++.++....|+ +..+++..++.+++.+....+..++.+|+. ++++|.+..++...+..+|..+++.+...+.
T Consensus 91 ~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~ 170 (444)
T PRK09669 91 GVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLV 170 (444)
T ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766555543 455666777778777788888889999988 5578999999999999998888877655544
Q ss_pred cccc--cCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHH
Q 009914 155 PMTF--MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVA 232 (522)
Q Consensus 155 ~~~~--~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (522)
.... ....+|+..+.+.+++.++..+..++..+|+..++++ ++ .+..+..+..+++|.++.++.
T Consensus 171 ~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~-------~~-------~~~~~~~~~~~~n~~~~~l~~ 236 (444)
T PRK09669 171 DILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVD-------NS-------SSVWKDLKLLLGNSQWRIMFI 236 (444)
T ss_pred HHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCc-------CC-------CCHHHHHHHHhCCchHHHHHH
Confidence 3211 1125899999988888777766665544432211110 00 112345566788998887766
Q ss_pred HhhhccchhHHHH-HHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHH
Q 009914 233 QGVTGSFPWSALS-FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 311 (522)
Q Consensus 233 ~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (522)
..++......... ..+.|.+..-.++...+.+.....+..+++.++++++.||+++|+ ....... +... ..
T Consensus 237 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~-----~~~~~~~-~~~~--~~ 308 (444)
T PRK09669 237 FNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVR-----AFKWTIV-AFVI--LS 308 (444)
T ss_pred HHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-----HHHHHHH-HHHH--HH
Confidence 5554444333222 233333332223334445555666778888899999999999884 3322211 1111 11
Q ss_pred HHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcC-------cchhHHHHHHHHHHHHHHhchhhHHHHHH
Q 009914 312 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAPPVVGIL 384 (522)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~i~~~~~g~l 384 (522)
..+...+ +++.+.+.+..++.|++.+...+ ..++++.|..+ ++..|..+|..+....++.++++.+.|.+
T Consensus 309 ~~~~~~~--~~~~~~~~~~~~i~g~~~~~~~~-~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 309 ALIFFIP--PSNVWLIFALNILFNFIQNLTTP-LQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred HHHHHhC--cchHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222 23344455666778888888777 78899988875 34467789999999999999999999999
Q ss_pred HHHhhCcc
Q 009914 385 AQHVYGFK 392 (522)
Q Consensus 385 ~~~~~g~~ 392 (522)
.+. .||.
T Consensus 386 l~~-~Gy~ 392 (444)
T PRK09669 386 LAW-VDYV 392 (444)
T ss_pred HHH-cCCC
Confidence 998 7985
No 93
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.94 E-value=2e-23 Score=200.90 Aligned_cols=353 Identities=19% Similarity=0.238 Sum_probs=251.0
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhc-hhHHHHHHHHHHHHHHHHHH
Q 009914 11 VNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHN-RAHVIALGAFLWAAATFLVA 89 (522)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g-rr~~l~~~~~~~~~~~~~~~ 89 (522)
++.-+++.++....+.|.++.+.++.|.|.+|+|.+.++..+...++++++|.++||.+ +|+.+.+..++.++..+...
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666677888889999999999999999999999999999999999999986 67778777777777777777
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHH-HhhhcccccCCCCchHHH
Q 009914 90 FSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFS-VVMAPMTFMGIPGWRISF 168 (522)
Q Consensus 90 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~-~~l~~~~~~~~~gw~~~f 168 (522)
..++++.+++..++..+......|...++..+... +++.-.|......++|.+++.... ..+.... +..+....+
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~--~~~~~~~~~ 162 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYL--GISGTSLIF 162 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhh--ccccccHHH
Confidence 78899988888888888888889999999988875 356678888888888888886542 2333220 112334566
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchh-HHHHHH
Q 009914 169 HIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPW-SALSFA 247 (522)
Q Consensus 169 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 247 (522)
++.+...++.....+.+|+.|+.+..+++.+ +...++..+++|+|.+..+++..+...... ...++.
T Consensus 163 ~i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~------------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~ 230 (400)
T PF03825_consen 163 YIAAILSLLLAGFALFLPKTPPKRSAKESVK------------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFF 230 (400)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccccCCCcc------------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666655566665552211111100 111122345788888877766666555544 455788
Q ss_pred HHHHHHhC-CChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHH
Q 009914 248 AMWLELTG-FSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVM 326 (522)
Q Consensus 248 ~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (522)
+.|+++.| .+....+.+.++..+..++.-...+++.+|++.++ .+.... .. ...=..+..... ++.+..
T Consensus 231 ~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~-----ll~~a~--~~--~~vR~~l~a~~~-~~~~~~ 300 (400)
T PF03825_consen 231 SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW-----LLLLAL--VA--YAVRWLLYAYFS-DPWPFI 300 (400)
T ss_pred HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-----HHHHHH--HH--HHHHHHHHHHhc-CCcHHH
Confidence 99999988 77888888888989999999999999999999883 222111 11 111111111111 122211
Q ss_pred ---HHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHH-HHHhchhhHHHHHHHHHhhCc
Q 009914 327 ---HGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFE-SILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 327 ---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~i~~~~~g~l~~~~~g~ 391 (522)
......+.|+..+.... ....++.+.+|++.|++++++++.+. .+|..+|..++|+++|+ .|.
T Consensus 301 ~~~~~l~q~lhG~tf~~~~~-a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~-~g~ 367 (400)
T PF03825_consen 301 VALQLLGQLLHGLTFGLFHA-ASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDA-FGA 367 (400)
T ss_pred HHHHHHHHhhhhHHHHHHHH-HHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hcc
Confidence 12223568888888888 78899999999999999999998864 68999999999999999 554
No 94
>PTZ00207 hypothetical protein; Provisional
Probab=99.94 E-value=4.7e-23 Score=204.51 Aligned_cols=369 Identities=15% Similarity=0.126 Sum_probs=250.7
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
+||..+..........+ ..+.++...|.+.+++|+|..+++++.++. ....+++++.|++.||+|+|+++.++.++++
T Consensus 25 ~Rw~~lva~~~~~~~~g-~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 25 RRFALLVLGAFCSICTS-FMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred chHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34554444444443333 334677888999999999999999998874 4455678889999999999999999999999
Q ss_pred HHHHHHHhh------hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 83 AATFLVAFS------STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 83 ~~~~~~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
++.++++++ ++++.+++.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++.+.+...+..
T Consensus 103 iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~- 180 (591)
T PTZ00207 103 LGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS- 180 (591)
T ss_pred HHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 999999987 689999999999999999999999999999996 678999999999999999865544444443
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCC---CCC-CCcccc------------cch--hh----------
Q 009914 157 TFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDG---GTA-NSDQVS------------SKS--FR---------- 208 (522)
Q Consensus 157 ~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~-~~~~~~------------~~~--~~---------- 208 (522)
.+|+..|++.+++.++..++.+.+.++|+.... ++. +++++. +.+ ..
T Consensus 181 -----~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l 255 (591)
T PTZ00207 181 -----DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIIL 255 (591)
T ss_pred -----HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHH
Confidence 368888999898888888887776666543221 100 000000 000 00
Q ss_pred ----------h---h-------------h-----------------------------------------------HHHH
Q 009914 209 ----------S---D-------------V-----------------------------------------------KVLI 215 (522)
Q Consensus 209 ----------~---~-------------~-----------------------------------------------~~~~ 215 (522)
. + + ....
T Consensus 256 ~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (591)
T PTZ00207 256 IVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDV 335 (591)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccc
Confidence 0 0 0 0000
Q ss_pred --------HHhhhhhcchhHHHHHHHhhhccch-hHHHHHHHHHHHHh-CCChhH--HHHHHHHHHHHHhccchhhhhhh
Q 009914 216 --------QEAKSVIKIPSFQIIVAQGVTGSFP-WSALSFAAMWLELT-GFSHEK--TAFLMALFVIASSLGGLFGGRMG 283 (522)
Q Consensus 216 --------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~ 283 (522)
+...+.+++..+|++....++.... ..+.+.+..+.+.+ |.+... ...+.++.++++.+|++..|.+.
T Consensus 336 ~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~ 415 (591)
T PTZ00207 336 DYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE 415 (591)
T ss_pred cCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH
Confidence 0222334455677766666655553 33444566666666 663322 23378889999999999999988
Q ss_pred hHhhhcCCC--chhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHH
Q 009914 284 DFLSARFPN--SGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTS 361 (522)
Q Consensus 284 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (522)
....+|+.. ..+.+...+..++ .....++.+..+. -.+.+..++.|++.|...+ +....++|++. ++-|+
T Consensus 416 ~~~~~~~~~~r~prt~~l~~~~~~-~~~~lll~~~~p~-----~~L~~~~~lvg~~~G~~~~-~~~~i~selFg-k~~g~ 487 (591)
T PTZ00207 416 IWSQKRRAEDRVPITIALFIPSVC-IITMLTLFLTLPK-----AALPLPYFIAAFANGFMAA-TIALVTRTIFA-KDPAK 487 (591)
T ss_pred HHHHhhccccccchhHHHHHHHHH-HHHHHHHHHHCCc-----cHhHHHHHHHHHHhhHhHH-HHHHHHHHHhc-cchHH
Confidence 444333310 1122222222222 1112222222221 1266888899999999988 89999999999 88999
Q ss_pred HHHHHHHHHHHHhchh-hHHHHHHHHHh
Q 009914 362 VYAMDRSFESILSSFA-PPVVGILAQHV 388 (522)
Q Consensus 362 ~~g~~~~~~~~~~~i~-~~~~g~l~~~~ 388 (522)
-+-+.....-+|..+- ..+.|.++|.-
T Consensus 488 ~yN~~~~a~pigs~~~n~~l~G~~Yd~e 515 (591)
T PTZ00207 488 HYNFCFLGSVLSAIFLNRLLYGEWYTQQ 515 (591)
T ss_pred HhhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888887665 66788898873
No 95
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=2.3e-23 Score=208.53 Aligned_cols=370 Identities=15% Similarity=0.085 Sum_probs=230.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHH-HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH-hchhHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYK-EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR-HNRAHVIALGAFLWAA 83 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~grr~~l~~~~~~~~~ 83 (522)
+.+..+++..+...+..+.....++ ++.+++|.+.++.+++.+.+........+++|+++|| +|||+.++++.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~i 100 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAI 100 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 4456666777777777666555555 5568999999999998888777766667899999999 5999999999999999
Q ss_pred HHHHHHhhh-hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCc--hhHHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 009914 84 ATFLVAFSS-TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSN--RGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMG 160 (522)
Q Consensus 84 ~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~ 160 (522)
+.+++++++ +.+.+++.|+++|++.|...+...+++.+++|+++ |..++++.+.+.++|..+||.+++++.+.
T Consensus 101 g~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~---- 176 (500)
T PRK09584 101 GYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK---- 176 (500)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 999888874 56667788999999999999999999999998653 45688999999999999999999999887
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhh---ccCCCCCCCCCCCCCcccc-------------------cchhhhhh-------
Q 009914 161 IPGWRISFHIVGLISVVVGTLVRL---FANDPHFPDGGTANSDQVS-------------------SKSFRSDV------- 211 (522)
Q Consensus 161 ~~gw~~~f~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~------- 211 (522)
.|||+.|++.++..++..+...+ ..++....+..++.+.... ........
T Consensus 177 -~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (500)
T PRK09584 177 -YGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALG 255 (500)
T ss_pred -hCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 89999999987654444332222 2222111110000000000 00000000
Q ss_pred --HHHHH---HhhhhhcchhHHHHHHHhhhccchhHHHHHHHHHHHH---hCCCh------hHHHHHHHHHHHHHhccch
Q 009914 212 --KVLIQ---EAKSVIKIPSFQIIVAQGVTGSFPWSALSFAAMWLEL---TGFSH------EKTAFLMALFVIASSLGGL 277 (522)
Q Consensus 212 --~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~------~~~~~~~~~~~~~~~~~~~ 277 (522)
....+ ..++.-++|.+ ..+...+.....|......+.++.. ...+. ...+++.++..+..++..+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p 334 (500)
T PRK09584 256 IVVIFGKEAFAMKGAARRKMI-VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSP 334 (500)
T ss_pred HHHHHHHHHhhcCHHHHHHHH-HHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHH
Confidence 00000 01111222222 2222222223334444444444321 11111 1256677777777777777
Q ss_pred hhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCC--CCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcC
Q 009914 278 FGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP--DDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP 355 (522)
Q Consensus 278 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 355 (522)
+.+++-+|.++|.+...+..+..+....+........ ... ...-+.++.....++.+++.....| ...+++.+..|
T Consensus 335 ~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~-~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p-~g~s~~~~~aP 412 (500)
T PRK09584 335 ILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGA-KFANDAGIVSVNWLIASYGLQSIGELMISG-LGLAMVAQLVP 412 (500)
T ss_pred HHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCccCHHHHHHHHHHHHHHHHHHhH-HHHHHHHHhCc
Confidence 7777777777664432233332222222222211111 110 1112233577888999999999999 89999999999
Q ss_pred cchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 356 EKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 356 ~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
++.||+++|+...... +++.+.|.+.+.
T Consensus 413 ~~~rg~~~g~~~l~~a----~g~~~~g~~~~~ 440 (500)
T PRK09584 413 QRLMGFIMGSWFLTTA----GAALIAGYVANL 440 (500)
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 9999999997665444 445555555543
No 96
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.4e-22 Score=192.59 Aligned_cols=409 Identities=15% Similarity=0.172 Sum_probs=287.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhh-hHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH----hchhH-HHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLP-GVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR----HNRAH-VIALGAF 79 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr----~grr~-~l~~~~~ 79 (522)
+..+...++.+.......... .++-++.+.+|+++..+|.+..+.-+-.++..|+.|.++|| +||+| .++.+.+
T Consensus 12 ~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~i 91 (467)
T COG2211 12 KEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAI 91 (467)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhH
Confidence 334444555555544444444 44456788899999999999999999999999999999996 67655 5888888
Q ss_pred HHHHHHHHHHhhhh------HHHHHHHHHHHHHHhhhhHHHHHHHHhhccC-CCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 009914 80 LWAAATFLVAFSST------FAQVAISRALNGIGLALVAPAIQSLVADSTD-DSNRGVAFGWLQLTSNIGSLVGGLFSVV 152 (522)
Q Consensus 80 ~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 152 (522)
..++.+.++..+++ ....++..++.+++.+....+..++.++..+ ++||.+..++.+.+..+|..+...+...
T Consensus 92 p~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~p 171 (467)
T COG2211 92 PFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPP 171 (467)
T ss_pred HHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888887763 4566788899999999999999999999984 5889999999999999998887777766
Q ss_pred hhcccccC--CCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHH
Q 009914 153 MAPMTFMG--IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQII 230 (522)
Q Consensus 153 l~~~~~~~--~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (522)
+......+ ..||+..-.+.+++..+..+.+++-.+|+..+....+. ..+ ++..+.....++|+.+...
T Consensus 172 lv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~---~~~-------~~~~~~~~~~~~Nrp~~~~ 241 (467)
T COG2211 172 LVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKT---GVK-------LKLKDSFLLIFKNRPLLLL 241 (467)
T ss_pred HHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcc---ccc-------ccHHHHHHHHHccchHHHH
Confidence 66543222 46899999999999888888888866554432221110 000 2233445567789988888
Q ss_pred HHHhhhccchhHH-HHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHH
Q 009914 231 VAQGVTGSFPWSA-LSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 308 (522)
Q Consensus 231 ~~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (522)
+...++....+.+ .+....|.+ .+|.+.............+.+++.++..++.+|+|+|+ ....... +..
T Consensus 242 l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~-----~~~~~~~-~~~-- 313 (467)
T COG2211 242 LLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKK-----LFLIGLL-LLA-- 313 (467)
T ss_pred HHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH-----HHHHHHH-HHH--
Confidence 7766666554433 344556665 47888888888888888888888999999999999994 3333321 111
Q ss_pred HHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcC-------cchhHHHHHHHHHHHHHHhchhhHHH
Q 009914 309 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAPPVV 381 (522)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~i~~~~~ 381 (522)
+....++..+ .++.++.++..++.+++.+...+ ..++++.|..+ .+..|..+|...++.-+|.+++..+.
T Consensus 314 i~~~~~~f~~--~~~~~l~~~~~~i~~~g~~~~~~-l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 314 VGYLLLYFTP--AGSVVLIVVALIIAGVGTGIANP-LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred HHHHHHHhhc--CcchHHHHHHHHHHHHHhhcccc-ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 1222222222 34455566666788888888888 88999998765 55668899999999999999999999
Q ss_pred HHHHHHhhCcccCCCCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccHHHHH
Q 009914 382 GILAQHVYGFKPIPKGSSATEEIATDRANAASLAKALYTAIGIPMALCCFIYSFLYSTYPRDRERAR 448 (522)
Q Consensus 382 g~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (522)
|++.+. .||.+.- ..|...++..-......+++++..+.+ +..+.++.++++.+
T Consensus 391 g~~L~~-~Gyv~~~-----------~~Q~~~al~gI~~~~~~~Pa~l~l~~~-i~~~~y~L~~~~~~ 444 (467)
T COG2211 391 GWILGA-IGYVPNV-----------SAQSASALFGIRFLFIILPALLLLLAA-IIIFFYKLNEKMHK 444 (467)
T ss_pred HHHHHH-cCCCCCc-----------ccCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCHHHHH
Confidence 999999 8997541 123333333333333444444433333 33346665555443
No 97
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.93 E-value=2.2e-22 Score=198.27 Aligned_cols=358 Identities=15% Similarity=0.130 Sum_probs=242.2
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh
Q 009914 12 NLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS 91 (522)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~ 91 (522)
++......+........++.+..++|-+ ....|+.+...++.++..++.|+++|.+|||..++.+.++..+|.++++.+
T Consensus 50 ~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA 128 (599)
T PF06609_consen 50 SLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA 128 (599)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC
Confidence 3333444555556677889999999965 678899999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHH
Q 009914 92 STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIV 171 (522)
Q Consensus 92 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~ 171 (522)
+|...++.+..+.|+|.|... .....++|..|.|.|....++.....-.....++.++..+... .+|||.|++.
T Consensus 129 ~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~-----~~WRw~~~~~ 202 (599)
T PF06609_consen 129 QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH-----SGWRWIFYIF 202 (599)
T ss_pred CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC-----CCcchHHHHH
Confidence 999999999999999977766 4556689999999998887777766655566777777776655 7999999999
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCC--Cccc---------------------------ccchhhhhh-----------
Q 009914 172 GLISVVVGTLVRLFANDPHFPDGGTAN--SDQV---------------------------SSKSFRSDV----------- 211 (522)
Q Consensus 172 ~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~---------------------------~~~~~~~~~----------- 211 (522)
++...+..++.+++...|++.+.+.++ .++. .....|++.
T Consensus 203 ~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~ 282 (599)
T PF06609_consen 203 IIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFV 282 (599)
T ss_pred HHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHH
Confidence 888777766655543333322111110 0000 000011110
Q ss_pred -------HHHHHH------hhhhhcc-hhHHHHHHHhhhcc-chhHHHHHHHHHHH-HhCCCh---hHHHHHHHHHHHHH
Q 009914 212 -------KVLIQE------AKSVIKI-PSFQIIVAQGVTGS-FPWSALSFAAMWLE-LTGFSH---EKTAFLMALFVIAS 272 (522)
Q Consensus 212 -------~~~~~~------~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~~~~~ 272 (522)
-|.+.. ..+++++ |.+...++..+... .++....+.|.... .++-++ ...++.....+++.
T Consensus 283 ~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~ 362 (599)
T PF06609_consen 283 LLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGS 362 (599)
T ss_pred HHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHH
Confidence 011100 1245665 44555444433333 34555556666554 355544 25677778888888
Q ss_pred hccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhh
Q 009914 273 SLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAE 352 (522)
Q Consensus 273 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 352 (522)
.++.++.+.+..++++.| ..+......+. .+...+...-+. .... .....++.|++.++... ......+-
T Consensus 363 ~~g~~i~g~l~~~ir~~K-----w~li~~~~~~t-a~~Gama~~~~~-n~~~--~i~~~~l~g~giG~~~~-~~~~~~ql 432 (599)
T PF06609_consen 363 CAGAVILGLLFSKIRHIK-----WQLIFGSVLMT-AFCGAMAAVRPD-NKNA--AIAFLVLAGFGIGGILV-PAIVIAQL 432 (599)
T ss_pred HHHHHHHHHHHHHccchh-----HHHHHHHHHHH-HHHHHHHHccCC-Ccch--HHHHHHHHHHhHHHHHH-HHHHeeEe
Confidence 889999999998887553 33322222222 222222222222 2222 33556677777777666 56777777
Q ss_pred hcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 009914 353 IVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 386 (522)
Q Consensus 353 ~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~ 386 (522)
.+|++.-|++.|+..+++.+|+++|..+...+..
T Consensus 433 ~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 433 IVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred eeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 8899999999999999999999999998876664
No 98
>PRK11462 putative transporter; Provisional
Probab=99.93 E-value=2.9e-22 Score=198.81 Aligned_cols=358 Identities=10% Similarity=0.118 Sum_probs=237.1
Q ss_pred HHHHHHHHHHHHHhhhhh-hHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH----hchhH-HHHHHHHHHH
Q 009914 9 VLVNLAGIMERADESLLP-GVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR----HNRAH-VIALGAFLWA 82 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr----~grr~-~l~~~~~~~~ 82 (522)
+...++.+.......... .+..++.+.+|+++..+|.+..+..+..++..|+.|+++|| +|||| .++++.+..+
T Consensus 12 ~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~ 91 (460)
T PRK11462 12 IGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFG 91 (460)
T ss_pred HhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHH
Confidence 344445544444444444 45567788899999999999999999999999999999996 68765 4777878888
Q ss_pred HHHHHHHhhhh------HHHHHHHHHHHHHHhhhhHHHHHHHHhhccC-CCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009914 83 AATFLVAFSST------FAQVAISRALNGIGLALVAPAIQSLVADSTD-DSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP 155 (522)
Q Consensus 83 ~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~ 155 (522)
++.+++...|+ +..+++..++..++..+...+..++.+|..+ ++||++..++...+..+|..+++.+...+..
T Consensus 92 i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~ 171 (460)
T PRK11462 92 IVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVN 171 (460)
T ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777665553 4456677778889999999999999999986 6889999999999999998888877665554
Q ss_pred ccc--cCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHH
Q 009914 156 MTF--MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQ 233 (522)
Q Consensus 156 ~~~--~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (522)
... ....+|+....+.+++.+++..+.+...+|+...+. + + ....+..+..++|+.++.++..
T Consensus 172 ~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~------~--~-------~~~~~~l~~~~~Nk~~~~l~~~ 236 (460)
T PRK11462 172 LIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP------T--T-------TSMREDLRDIWQNDQWRIVGLL 236 (460)
T ss_pred HhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc------c--C-------CCHHHHHHHHhCChHHHHHHHH
Confidence 311 111468888888887777776665554443221110 0 0 0122345667788888776655
Q ss_pred hhhccchhHHH-HHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHH
Q 009914 234 GVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 312 (522)
Q Consensus 234 ~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (522)
.+......... .....|.+...-++...+.+.....++.+++.++++++.||+++|+ ....... .... ..+
T Consensus 237 ~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~-----~~~~~~~-~~~~--~~~ 308 (460)
T PRK11462 237 TIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVT-----IFWWTNA-LLAV--ISL 308 (460)
T ss_pred HHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-----HHHHHHH-HHHH--HHH
Confidence 44444432222 2233333332223344556677778888999999999999998873 3222111 1111 111
Q ss_pred HHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcC-------cchhHHHHHHHHHHHHHHhchhhHHHHHHH
Q 009914 313 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAPPVVGILA 385 (522)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~ 385 (522)
.+...+ ....+...+..++.|++.+...+ ..++++.|..+ .+..|..++..++...++.++++.+.|.+.
T Consensus 309 ~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~-l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 309 AMFFVP--MQASITMFVFIFVIGVLHQLVTP-IQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred HHHHhc--hhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222 12222233344556666655555 55777777765 455577778888999999999999999999
Q ss_pred HHhhCccc
Q 009914 386 QHVYGFKP 393 (522)
Q Consensus 386 ~~~~g~~~ 393 (522)
+. .||..
T Consensus 386 ~~-~Gy~~ 392 (460)
T PRK11462 386 AY-GGYDA 392 (460)
T ss_pred HH-cCCCC
Confidence 98 68863
No 99
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=2.2e-23 Score=210.22 Aligned_cols=365 Identities=15% Similarity=0.178 Sum_probs=242.2
Q ss_pred HHHHHHHHHHH--hhhhhhHHHHHHHhcC-----CCh--hhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHH
Q 009914 11 VNLAGIMERAD--ESLLPGVYKEVGAALH-----TDP--TGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLW 81 (522)
Q Consensus 11 ~~~~~~~~~~~--~~~~~~~~~~~~~~~g-----~s~--~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~ 81 (522)
..++.+..+.+ .....+....+.+... .+. .+.+++.+...++..+++++.|+++|++|||+.++++.+.+
T Consensus 50 ~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~ 129 (513)
T KOG0254|consen 50 AALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLF 129 (513)
T ss_pred HHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 34444444543 3455666666666322 222 34599999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 009914 82 AAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGI 161 (522)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~ 161 (522)
.++.+++++++|++.++++|++.|+|.|........+++|..|++.|+...+..+....+|..++..++....+. .
T Consensus 130 ~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~---~- 205 (513)
T KOG0254|consen 130 LIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV---Y- 205 (513)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC---C-
Confidence 999999999999999999999999999999999999999999999999999999999999999996555554332 0
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCccc------------ccchhhhhhH-HHHH---------Hhh
Q 009914 162 PGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQV------------SSKSFRSDVK-VLIQ---------EAK 219 (522)
Q Consensus 162 ~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~-~~~~---------~~~ 219 (522)
.+||..+.+..+.+++..+..++.|++|++..++.+.++.+ +........+ +... .++
T Consensus 206 ~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (513)
T KOG0254|consen 206 AGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWG 285 (513)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHH
Confidence 48999999999999998888777888887765533221110 0000110111 0000 011
Q ss_pred hhh----cchhHHHHHHHhhhccc-hhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCch
Q 009914 220 SVI----KIPSFQIIVAQGVTGSF-PWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSG 294 (522)
Q Consensus 220 ~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 294 (522)
.++ +++.+..+.+..+.... .+....|.+.+++..|.+... .....+.++..+++.++..++.||+|||+
T Consensus 286 ~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~---- 360 (513)
T KOG0254|consen 286 ELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRK---- 360 (513)
T ss_pred HhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHH----
Confidence 112 22223233333333322 234446778888887776543 45555667777788888899999999984
Q ss_pred hHHHHH-HHHHHHHHHHHHHHHhCCC----C--CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHH
Q 009914 295 RIILAQ-ISSLSAIPLAALLLLVLPD----D--PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDR 367 (522)
Q Consensus 295 ~~~~~~-~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 367 (522)
+++.. ..+..+..+.......... . .....+...+.+...+..+. .+ +.+.+..|.+|.+.|+++.++..
T Consensus 361 -lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~-g~-v~w~~~sEifp~~~r~~~~s~~~ 437 (513)
T KOG0254|consen 361 -LLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGW-GP-VPWVIVSEIFPLRLRSKGASLAV 437 (513)
T ss_pred -HHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhccc-cc-chhhhhhccCcHhHHhhhHHHHH
Confidence 33322 2222222222222222111 1 11222222233333333333 33 56789999999999999999999
Q ss_pred HHHHHHhchhhHHHHHHHHH
Q 009914 368 SFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 368 ~~~~~~~~i~~~~~g~l~~~ 387 (522)
.+..+...+-....-.+.+.
T Consensus 438 ~~n~~~~~~v~~~~~~~~~~ 457 (513)
T KOG0254|consen 438 AVNWLWNFLISFFFPFITEA 457 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99988777665555555444
No 100
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.93 E-value=2.6e-23 Score=206.27 Aligned_cols=371 Identities=15% Similarity=0.049 Sum_probs=244.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhc-----hhHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHN-----RAHVIALGAF 79 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g-----rr~~l~~~~~ 79 (522)
...+.++...++..++.........|.+.+++|+|+++++...++..++..+ .+++|.++||++ ||+.++++.+
T Consensus 25 ~~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 25 RVVLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGL 103 (468)
T ss_pred chHHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHH
Confidence 3455666777888888844455666677778999999999999999999997 556999999997 6777777776
Q ss_pred HHH-HHHHHHHhhhhHHHH-HHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHH---HHHHHHHHHHHHHHHHHHHHhhh
Q 009914 80 LWA-AATFLVAFSSTFAQV-AISRALNGIGLALVAPAIQSLVADSTDDSNRGVA---FGWLQLTSNIGSLVGGLFSVVMA 154 (522)
Q Consensus 80 ~~~-~~~~~~~~~~~~~~l-~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~---~~~~~~~~~lg~~~g~~l~~~l~ 154 (522)
+.+ ++...++..++.... .+..++.+++.+...++..++..|..+ +++... .++......+|.++|+.+++.+.
T Consensus 104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 663 443444444554444 448899999999999999999999998 544443 34444455689999999999999
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCc----ccccchhhhhhHHHHHHhhhhhcchhHHHH
Q 009914 155 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSD----QVSSKSFRSDVKVLIQEAKSVIKIPSFQII 230 (522)
Q Consensus 155 ~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (522)
+. .+|+..|++.+++.++..+...+++|+++....+..++. ...........++..++.+..+++|.++..
T Consensus 183 ~~-----~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~ 257 (468)
T TIGR00788 183 DK-----TLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKP 257 (468)
T ss_pred Hh-----cCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHH
Confidence 87 899999999988887775544555543211111100000 000000011123334445556777777664
Q ss_pred HHHhhh-ccc-hhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHH
Q 009914 231 VAQGVT-GSF-PWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 308 (522)
Q Consensus 231 ~~~~~~-~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (522)
++..++ +.. ......+.-...+.+|+++...|.+....+++.+++..+.+++.+|++.|+ .+.... .+....
T Consensus 258 l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~-----~l~~~~-~l~~~~ 331 (468)
T TIGR00788 258 LIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRL-----LFGVTT-LLYTLS 331 (468)
T ss_pred HHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHH-----HHHHHH-HHHHHH
Confidence 443333 211 111111100111358999999999999999999999999999988888773 222111 111111
Q ss_pred HHHHHHH--hCC--CCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHH
Q 009914 309 LAALLLL--VLP--DDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGIL 384 (522)
Q Consensus 309 ~~~~~~~--~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l 384 (522)
....... .+. ...+..+......++.+++.+.... ....++++.+|++.+|+.+++.+++.+++..+++.++|.+
T Consensus 332 ~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~-~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 332 SLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFM-PFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred HhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHc-cHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 000 0001122344555667777777777 6799999999999999999999999999999999999999
Q ss_pred HHHhhC
Q 009914 385 AQHVYG 390 (522)
Q Consensus 385 ~~~~~g 390 (522)
.+. .|
T Consensus 411 ~~~-~g 415 (468)
T TIGR00788 411 MET-IG 415 (468)
T ss_pred HHH-cC
Confidence 998 56
No 101
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.92 E-value=2.3e-24 Score=198.27 Aligned_cols=373 Identities=13% Similarity=0.116 Sum_probs=245.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcC--------CChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALH--------TDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALG 77 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~ 77 (522)
+.+.+..++.+.+.++...++.+.|.+...+. .++...+.+..+..++.+++++++|++.||+|||+++...
T Consensus 41 k~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~ 120 (538)
T KOG0252|consen 41 KAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKE 120 (538)
T ss_pred HHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHH
Confidence 45666777889999999999999888776542 3455678899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 009914 78 AFLWAAATFLVAFSS-------TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFS 150 (522)
Q Consensus 78 ~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~ 150 (522)
++++.++++++++.. -.+++...|++.|+|.|.-+|...+..+|...+++||...+.+.+..++|.+.|.+++
T Consensus 121 liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt 200 (538)
T KOG0252|consen 121 LIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVA 200 (538)
T ss_pred HHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHH
Confidence 999999999887752 2577889999999999999999999999999999999999999988888888888777
Q ss_pred Hhhhccc---cc-------CCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCC----------Cc------cccc
Q 009914 151 VVMAPMT---FM-------GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTAN----------SD------QVSS 204 (522)
Q Consensus 151 ~~l~~~~---~~-------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----------~~------~~~~ 204 (522)
..+.... .. -+.-||..|.+.++..++.....+..+++++...-..++ .. +...
T Consensus 201 ~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~ 280 (538)
T KOG0252|consen 201 LIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTA 280 (538)
T ss_pred HHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhcc
Confidence 6655321 00 113499999999888888877777777765554110000 00 0000
Q ss_pred chhhhhhHHHHHHhhhhhcch----hHHHHHHHhhhccchhHHHHHHHHHHHHhCCChhHHHH--------HHHHHHH-H
Q 009914 205 KSFRSDVKVLIQEAKSVIKIP----SFQIIVAQGVTGSFPWSALSFAAMWLELTGFSHEKTAF--------LMALFVI-A 271 (522)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~-~ 271 (522)
.......+.....+...+..+ .+......+..-...|....+...+++..|+.+..... ...+... +
T Consensus 281 ~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~ 360 (538)
T KOG0252|consen 281 ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCS 360 (538)
T ss_pred ccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHc
Confidence 000000011111111111111 11122223333333455555666777766665443322 2223333 3
Q ss_pred HhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC-CchhHHHHHHHHHHHHHHhccCCCcchhhh
Q 009914 272 SSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD-PSTPVMHGLVLVVTGLFISWNAPATNNPIF 350 (522)
Q Consensus 272 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 350 (522)
.+.|..+...++|++||++ ..+..+ .++. ...+.+..+.. ........++..+..++..+........+.
T Consensus 361 ~vPGyw~tv~~id~iGRk~-----iq~~GF-~~~~---i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivp 431 (538)
T KOG0252|consen 361 TVPGYWFTVYFIDIIGRKY-----IQLMGF-FIMT---IFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVP 431 (538)
T ss_pred cCCceeEEEEEeehhhhHH-----HHHhhH-HHHH---HHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEee
Confidence 3447778888999999994 222111 1111 11111122221 111122334444445444444444677888
Q ss_pred hhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 351 AEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 351 ~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
+|.+|.+.|++..|+....+.+|+.++....+++.++
T Consensus 432 aE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~ 468 (538)
T KOG0252|consen 432 AEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH 468 (538)
T ss_pred hhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc
Confidence 9999999999999999999999999999999999885
No 102
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.92 E-value=6.1e-21 Score=187.20 Aligned_cols=340 Identities=19% Similarity=0.186 Sum_probs=245.5
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHH-HHHHHHHHHHHHHHHHhh-h-hHHHHHHHHHHHHHHhhhhHHHHHH
Q 009914 41 TGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHV-IALGAFLWAAATFLVAFS-S-TFAQVAISRALNGIGLALVAPAIQS 117 (522)
Q Consensus 41 ~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~-l~~~~~~~~~~~~~~~~~-~-~~~~l~~~r~l~G~~~~~~~~~~~~ 117 (522)
+..++..++..+..++..|+.|.++|+-++||. +.+...+..+++.++.+. + +++...+..++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345778899999999999999999999987766 445555555666666664 3 4555556666667788888999999
Q ss_pred HHhhccCCCch--------------------------hHHHHHHHHHHHHHHHHHHHHHHhhhccccc---CCCCchHHH
Q 009914 118 LVADSTDDSNR--------------------------GVAFGWLQLTSNIGSLVGGLFSVVMAPMTFM---GIPGWRISF 168 (522)
Q Consensus 118 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~---~~~gw~~~f 168 (522)
++.+..+++++ ++..+.-.....+|.++..++.-.+...... +..+.|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999998888 8999999999999998888777665433211 124568999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHHH
Q 009914 169 HIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSFA 247 (522)
Q Consensus 169 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 247 (522)
.+.++..++..+..++..++++..+... ..........++..+..|+..+.|....+++..+++.- ..++..+.
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~-----~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~ 304 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLP-----SGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFA 304 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCC-----cchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888887777555433321111 01111222335555566666677777776666555444 45666778
Q ss_pred HHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHH-HHhCCCCCchhH
Q 009914 248 AMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL-LLVLPDDPSTPV 325 (522)
Q Consensus 248 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 325 (522)
..|.+ ++|++..+...+..+..+.+++|+++.+++.||+|.|.. +.+...+.....+++..+. +..........+
T Consensus 305 ~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~---~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~ 381 (477)
T PF11700_consen 305 GIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK---RTLLISLILWIIIPLYGLFGFWPSFFGLKSPW 381 (477)
T ss_pred HHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh---HHHHHHHHHHHHHHHHHHHHhhhcccCcccHH
Confidence 88886 799999999999999999999999999999999998831 1333222222222222211 111111233444
Q ss_pred HHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhh
Q 009914 326 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVY 389 (522)
Q Consensus 326 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~ 389 (522)
.+.+..++.|++.+..++ ...++.+++.|+++.+..+|++.......+.+||.+.|.+.+.+.
T Consensus 382 ~f~~~a~~~G~~~G~~qs-~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg 444 (477)
T PF11700_consen 382 EFWVLAVLIGLFMGGIQS-ASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG 444 (477)
T ss_pred HHHHHHHHHHHHhhhHHH-HHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 577788889999999998 899999999999999999999999999999999999999999953
No 103
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.92 E-value=6.3e-23 Score=183.02 Aligned_cols=358 Identities=15% Similarity=0.094 Sum_probs=249.1
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
+|........+.....+.....+.+.|.+...+|.+.-|..++......+..+++..+|.++|++|||+...+.....++
T Consensus 76 q~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v 155 (528)
T KOG0253|consen 76 QWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGV 155 (528)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHH
Confidence 45566666677777777777788888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC
Q 009914 84 ATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG 163 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g 163 (522)
...+.+.++|+..+++.|.+.|+|.|. .|...++-.|..|..+|..-+-.. ..+.+|.+....+.-..... .|
T Consensus 156 ~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~-----~g 228 (528)
T KOG0253|consen 156 FGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN-----FG 228 (528)
T ss_pred HHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh-----hh
Confidence 999999999999999999999999999 888888889999988888777666 99999999999999888888 89
Q ss_pred chHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCc----------------------------ccccchhhh-----h
Q 009914 164 WRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSD----------------------------QVSSKSFRS-----D 210 (522)
Q Consensus 164 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~-----~ 210 (522)
|||..........+.+.+..+++|+|+....+.++++ ++++..... .
T Consensus 229 wr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a 308 (528)
T KOG0253|consen 229 WRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSA 308 (528)
T ss_pred HHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhcc
Confidence 9999999998888888888889999887544332111 000000000 0
Q ss_pred hHHHHHHhhhh----hcchhHHHHHHHhhhccchhHHHHH-----------------HHHHHHH-h--CCChhHHHHHHH
Q 009914 211 VKVLIQEAKSV----IKIPSFQIIVAQGVTGSFPWSALSF-----------------AAMWLEL-T--GFSHEKTAFLMA 266 (522)
Q Consensus 211 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-~--g~~~~~~~~~~~ 266 (522)
-++.......+ ++...+.+....+.-...+|+.... .|.+++. . ..+...--.=..
T Consensus 309 ~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdll 388 (528)
T KOG0253|consen 309 AKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLL 388 (528)
T ss_pred ccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHH
Confidence 01111111111 2223332222222211222332222 2222221 0 111111112233
Q ss_pred HHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcc
Q 009914 267 LFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATN 346 (522)
Q Consensus 267 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 346 (522)
+..+..+.|.++.+++.||+|||+. +..... ++++ +....+. ....+. +.+..+..-++....+. +.
T Consensus 389 itslaefPGlLIt~~iverlGRKkT-----Mal~l~-~f~i-flfll~~---c~~rn~--~tvllf~arafisg~fq-va 455 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKT-----MALSLI-LFGI-FLFLLTT---CKTRNA--YTVLLFTARAFISGAFQ-VA 455 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhH-----HHHHHH-HHHH-HHHHHHH---hcCcch--hHHHHHHHHHHHhchhe-EE
Confidence 5578889999999999999999952 221111 1111 1111111 112221 33444555556666666 78
Q ss_pred hhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHH
Q 009914 347 NPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 381 (522)
Q Consensus 347 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~ 381 (522)
+.+..|++|+..|+++.|..+.+..+|+++.|.++
T Consensus 456 YvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 456 YVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred EEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 99999999999999999999999999999999988
No 104
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.92 E-value=7.3e-23 Score=202.48 Aligned_cols=344 Identities=18% Similarity=0.260 Sum_probs=256.9
Q ss_pred hhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHH----HhchhHH-HHHHHHHHHHHHHHHHhh-h-------
Q 009914 26 PGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAI----RHNRAHV-IALGAFLWAAATFLVAFS-S------- 92 (522)
Q Consensus 26 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~D----r~grr~~-l~~~~~~~~~~~~~~~~~-~------- 92 (522)
....+++.+.+|+++..+|++..+..+..++..|+.|.++| |+||||. ++++.+..+++.+++... |
T Consensus 22 ~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 22 SYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 45567788889999999999999999999999999999999 7997766 778888888888888766 4
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccC-CCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC--CCchHHHH
Q 009914 93 TFAQVAISRALNGIGLALVAPAIQSLVADSTD-DSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGI--PGWRISFH 169 (522)
Q Consensus 93 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~--~gw~~~f~ 169 (522)
....+++..++..++......+..++..|..+ +++|.+..++...+..+|.++...+.+.+......+. .+|++..+
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 23345777788899999999999999999997 4789999999999999999877777777664432222 27999999
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchhH-HHHHHH
Q 009914 170 IVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWS-ALSFAA 248 (522)
Q Consensus 170 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 248 (522)
+.+++.++..++..+..+|++.+.+++ +++ .+..+..+.++++|.++.++...++....+. .....+
T Consensus 182 v~~iv~~v~~~i~~~~~ke~~~~~~~~-----~~~-------~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~ 249 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKERSVEVTEQ-----EKK-------ISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLP 249 (428)
T ss_pred HHHHHHHHHhhhhhheeeecccccccc-----ccc-------cccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHH
Confidence 999999888888877666511111110 001 2233455677888888877777666655443 334566
Q ss_pred HHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHH
Q 009914 249 MWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMH 327 (522)
Q Consensus 249 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (522)
.|.+. .|.+ ...+.+.....++.+++.++.++++||+|+|+. ......... .......+ .+ ..+.+..
T Consensus 250 y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~-----~~~~~~~~~-~~~~~~~~--~~--~~~~~~~ 318 (428)
T PF13347_consen 250 YYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV-----YIIGLLLAA-LGFLLLFF--LG--PGSPWLV 318 (428)
T ss_pred HHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee-----hhhhHHHHH-HHHHHHHH--HH--hhhHHHH
Confidence 67764 5555 567788888899999999999999999999952 222211111 11111111 11 1445567
Q ss_pred HHHHHHHHHHHhccCCCcchhhhhhhcC-------cchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcccC
Q 009914 328 GLVLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFKPI 394 (522)
Q Consensus 328 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~~~ 394 (522)
.+...+.|++.+.... ..+++..|..+ ++..|..+|+.+....++..+++.+.|.+.+. .||...
T Consensus 319 ~i~~~l~gi~~~~~~~-~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~-~Gy~~~ 390 (428)
T PF13347_consen 319 LILFILAGIGYGAFFV-IPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL-VGYDAN 390 (428)
T ss_pred HHHHHHhHhhhccccc-ccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH-hCcCCC
Confidence 7888889999988888 88899998886 34579999999999999999999999999988 788644
No 105
>PRK09848 glucuronide transporter; Provisional
Probab=99.92 E-value=9.7e-22 Score=195.77 Aligned_cols=357 Identities=9% Similarity=0.022 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHHHHHHhhhh-hhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHh----chhHH-HHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLL-PGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRH----NRAHV-IALGAF 79 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~----grr~~-l~~~~~ 79 (522)
+..+...++.+......... ..+.+++.+.+|+++.++|.+.++..+..++..++.|+++||. ||||. +.++.+
T Consensus 8 ~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~ 87 (448)
T PRK09848 8 RTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTA 87 (448)
T ss_pred HHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHH
Confidence 33444445555555555444 4455677788899999999999999999999999999999996 76764 466655
Q ss_pred HHHHHHHHHHhhh-------hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccC-CCchhHHHHHHHHHHH-----HHHHHH
Q 009914 80 LWAAATFLVAFSS-------TFAQVAISRALNGIGLALVAPAIQSLVADSTD-DSNRGVAFGWLQLTSN-----IGSLVG 146 (522)
Q Consensus 80 ~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----lg~~~g 146 (522)
...+..++....+ ....+++..++.+++.+...++..++..+..+ +++|.+..++...+.+ ++..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~ 167 (448)
T PRK09848 88 PLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIG 167 (448)
T ss_pred HHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554444432211 22334556677888888888888888777764 4678888777665434 445555
Q ss_pred HHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchh
Q 009914 147 GLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPS 226 (522)
Q Consensus 147 ~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (522)
|.++....... ..+|.....+.+++.++..++.....+|+...+ . + + ....+.++.++++|.
T Consensus 168 p~i~~~~g~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~--~--~----~-------~~~~~~~~~l~~n~~ 229 (448)
T PRK09848 168 PSIKNSSPEEM---VSVYHFWTIVLAIAGMVLYFICFKSTRENVVRI--V--A----Q-------PSLKISLQTLKRNRP 229 (448)
T ss_pred HHHHHhCCCch---hhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCC--c--c----C-------CCHHHHHHHHhCCch
Confidence 55554321110 012222222333333333333333222221111 0 0 0 112234566789998
Q ss_pred HHHHHHHhhhccchh-HHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHH
Q 009914 227 FQIIVAQGVTGSFPW-SALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSL 304 (522)
Q Consensus 227 ~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 304 (522)
++......++....+ ......|.|++ .+|.+....++......++.+++.++.+++.||+++|+ .+..... +
T Consensus 230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~-----~~~~g~~-~ 303 (448)
T PRK09848 230 LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN-----TFLIGAL-L 303 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-----HHHHHHH-H
Confidence 887766655555433 33345666666 47776665555555556677888999999999999873 3332221 1
Q ss_pred HHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcc-------hhHHHHHHHHHHHHHHhchh
Q 009914 305 SAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK-------SRTSVYAMDRSFESILSSFA 377 (522)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~i~ 377 (522)
..+ ..+.+.. .. ....+......++.|++.+...+ ...++..|..|.+ .+|..+|+.+....++.+++
T Consensus 304 ~~i--~~~~~~~-~~-~~~~~~~~~~~~l~g~G~~~~~~-~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig 378 (448)
T PRK09848 304 GTC--GYLLFFW-VS-VWSLPVALVALAIASIGQGVTMT-VMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIG 378 (448)
T ss_pred HHH--HHHHHHH-cC-chhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHH
Confidence 111 1111111 11 22333345556677888877777 7788888887643 46999999999999999999
Q ss_pred hHHHHHHHHHhhCcc
Q 009914 378 PPVVGILAQHVYGFK 392 (522)
Q Consensus 378 ~~~~g~l~~~~~g~~ 392 (522)
+.+.|.+.+. .||+
T Consensus 379 ~~i~g~~l~~-~G~~ 392 (448)
T PRK09848 379 GSIPAFILGL-SGYI 392 (448)
T ss_pred HHHHHHHHHH-cCCC
Confidence 9999999998 7886
No 106
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.91 E-value=1.1e-21 Score=184.92 Aligned_cols=359 Identities=13% Similarity=0.151 Sum_probs=236.0
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhHHHHHHH-hcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHH
Q 009914 3 QETVTLVLVNLAGIMERADESLLPGVYKEVGA-ALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLW 81 (522)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~ 81 (522)
.+++..+.+...++...+...+..+..+...+ ..|+|.+++|.+.++..+...+.+|+.|.++||+|.||-++......
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l 83 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL 83 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence 34556777777888888888887777776665 58999999999999999999999999999999999666544333222
Q ss_pred --HHHH-HHHHhhh----hH-HHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 82 --AAAT-FLVAFSS----TF-AQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 82 --~~~~-~~~~~~~----~~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
..+. +...+.| |. ...+++-+..|+......|...+++.++. ++.+.-.|-..++.++|.+++..++|.+
T Consensus 84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L 161 (412)
T PF01306_consen 84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGIL 161 (412)
T ss_dssp HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhhee
Confidence 2222 2222222 22 22333344455556666777777777765 3446678889999999999999999999
Q ss_pred hcccccCCCCchHHHHHHHHHHHHHHHhhhhccCC-CCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHH
Q 009914 154 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFAND-PHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVA 232 (522)
Q Consensus 154 ~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (522)
.+. +-+..|++..+.+++..++.++..++ ++.....+. ++.+++ +...++..+++|+|.+|.+++
T Consensus 162 ~~i------~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~l~k~~~fw~~~l 227 (412)
T PF01306_consen 162 FNI------NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADA-LGAKKD-------KVSLKDVLSLFKMRNFWFFVL 227 (412)
T ss_dssp HHH------HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTT-SSS-------------HHHHHHHTTSHHHHHHHH
T ss_pred eee------CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcc-cccCCC-------CCcHHHHHHHhcchhHHHHHH
Confidence 874 55788887766666555554444322 221111111 111111 223455677889999998877
Q ss_pred Hhhhccchh-HHHHHHHHHHHHh----CCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHH
Q 009914 233 QGVTGSFPW-SALSFAAMWLELT----GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAI 307 (522)
Q Consensus 233 ~~~~~~~~~-~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (522)
........| ......+.|...+ +.+....|++.+...+..++...+.+++.+|+|.|+ .++.... +.
T Consensus 228 ~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~-----~Lllag~-i~-- 299 (412)
T PF01306_consen 228 FVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN-----LLLLAGV-IM-- 299 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-----HHHHHHH-HH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh-----HHHHHHH-HH--
Confidence 665554444 3334567777543 344567889999999999999999999999999994 2222211 11
Q ss_pred HHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHH-HHHHHHHhchhhHHHHHHHH
Q 009914 308 PLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMD-RSFESILSSFAPPVVGILAQ 386 (522)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~i~~~~~g~l~~ 386 (522)
.+=...... .++++.+...-.+.++....... ...-++.+.+|++..++.+.+. +...+++..+.++++|.++|
T Consensus 300 ---~iRi~~~~~-~~~~~~i~~~klLH~~e~~l~lv-a~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd 374 (412)
T PF01306_consen 300 ---AIRIIGSGF-ATNPWVISLIKLLHALEFPLLLV-AAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD 374 (412)
T ss_dssp ---HHHHHHHHT---SHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHhh-hcchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh
Confidence 111111111 23444577778888888887777 7889999999999999999885 56778999999999999999
Q ss_pred HhhCc
Q 009914 387 HVYGF 391 (522)
Q Consensus 387 ~~~g~ 391 (522)
+ .|+
T Consensus 375 ~-~G~ 378 (412)
T PF01306_consen 375 R-IGF 378 (412)
T ss_dssp H-HHH
T ss_pred h-cCc
Confidence 9 565
No 107
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.91 E-value=8.9e-21 Score=184.66 Aligned_cols=374 Identities=14% Similarity=0.095 Sum_probs=242.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHH----HhchhHHHHH-HHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAI----RHNRAHVIAL-GAFLWA 82 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~D----r~grr~~l~~-~~~~~~ 82 (522)
++.++...+-..+.+....+.++.+.+++|.+..+.+++..+..+...+.+|+.|+++| |+||||.+++ +....+
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~ 85 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHH
Confidence 44445555555666677777777788999999999999999999999999999999999 5999998766 466677
Q ss_pred HHHHHHHhhhhHH-----------------HHHHHHHHHHHHhhhhHHHHHHHHhhccCCCch--hHHHHHHHHHHHHHH
Q 009914 83 AATFLVAFSSTFA-----------------QVAISRALNGIGLALVAPAIQSLVADSTDDSNR--GVAFGWLQLTSNIGS 143 (522)
Q Consensus 83 ~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~lg~ 143 (522)
++.++++++++.. .++++-.+..++.....++..++++|.+|+++| +.++++.+...++|.
T Consensus 86 ~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ 165 (477)
T TIGR01301 86 FAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGN 165 (477)
T ss_pred HHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHH
Confidence 7777777766542 223344455567888888999999999998765 579999999999999
Q ss_pred HHHHHHHHhhh--cccc------cC--CCCchHHHHHHHHHHHHHHHhhhhccCCCCC-CCCCCC-CC-cccccchhhhh
Q 009914 144 LVGGLFSVVMA--PMTF------MG--IPGWRISFHIVGLISVVVGTLVRLFANDPHF-PDGGTA-NS-DQVSSKSFRSD 210 (522)
Q Consensus 144 ~~g~~l~~~l~--~~~~------~~--~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~-~~-~~~~~~~~~~~ 210 (522)
++|+.++++.. .... .+ -.+.|..|++.+++.++..++..+..+|.+. .+++.+ ++ ++.++......
T Consensus 166 ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (477)
T TIGR01301 166 VLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAF 245 (477)
T ss_pred HHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhh
Confidence 99999998752 1100 00 1267999999988888888777775555322 111110 00 01111111122
Q ss_pred hHHHHHHhhhhhcchhHHHHHHHhhhccch-hHHHHHHHHHHH-H-hCCChh------H----HHHHHHHHHHHHhccch
Q 009914 211 VKVLIQEAKSVIKIPSFQIIVAQGVTGSFP-WSALSFAAMWLE-L-TGFSHE------K----TAFLMALFVIASSLGGL 277 (522)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~g~~~~------~----~~~~~~~~~~~~~~~~~ 277 (522)
+++.++..+.+ .+.++.++...++.+.. +.+..|.+.|+. + ++.++. + ..+......+...+.++
T Consensus 246 ~~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~ 323 (477)
T TIGR01301 246 FGELFGAFKYL--PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSI 323 (477)
T ss_pred HHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444432 34555565555555553 455566666663 2 443321 1 12333445555566777
Q ss_pred hhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCC---------------CCCchhHHHHHHHHHHHHHHhccC
Q 009914 278 FGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP---------------DDPSTPVMHGLVLVVTGLFISWNA 342 (522)
Q Consensus 278 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~g~~~~~~~ 342 (522)
+..++.+|+|+|+ +...... .+.++.+....+.... ......+...+.+...|+..+...
T Consensus 324 ~l~~l~~~~g~~k----~~~~~s~-~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~ 398 (477)
T TIGR01301 324 GMEKLCRGWGAGK----RLWGIVN-IILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITY 398 (477)
T ss_pred HHHHHHHHhccch----hHHHHHH-HHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHH
Confidence 7888888887542 1212221 1111122222212110 000112456677788888888777
Q ss_pred CCcchhhhhhhcCc--chhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 343 PATNNPIFAEIVPE--KSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 343 ~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
. .-++++++..++ +..|..+|+.|.+..+.+.+.....|.+.+. .|
T Consensus 399 s-iPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~-~g 446 (477)
T TIGR01301 399 S-IPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQL-FG 446 (477)
T ss_pred H-HhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH-cC
Confidence 7 779999999984 5569999999999999999999998986666 44
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.91 E-value=3.3e-20 Score=181.49 Aligned_cols=374 Identities=14% Similarity=0.071 Sum_probs=231.7
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHH-HHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHh-chhHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEV-GAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRH-NRAHVIALGAFLW 81 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-grr~~l~~~~~~~ 81 (522)
+++.+..++...+...+..+.....+|.+ .+++|.++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 34566666777777777777666666654 567899999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHhhh-hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCC--chhHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009914 82 AAATFLVAFSS-TFAQVAISRALNGIGLALVAPAIQSLVADSTDDS--NRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTF 158 (522)
Q Consensus 82 ~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~ 158 (522)
+++.++++..+ +...+++...+.++|.|...+...++++|.+|++ +|..++++.+.+.++|..++|.+.+++.+.
T Consensus 87 ~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~-- 164 (493)
T PRK15462 87 AIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE-- 164 (493)
T ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 99987776543 2233444445555677777787889999999875 689999999999999999999999999887
Q ss_pred cCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCC-CCCCCCCcccccchh--------------h--hhhHHHH------
Q 009914 159 MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFP-DGGTANSDQVSSKSF--------------R--SDVKVLI------ 215 (522)
Q Consensus 159 ~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------------~--~~~~~~~------ 215 (522)
.||++.|.+.++..++..+......+..... ..+++..++++.... . ....+..
T Consensus 165 ---~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (493)
T PRK15462 165 ---YSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALI 241 (493)
T ss_pred ---hChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999987664443333332222111110 000000000000000 0 0000000
Q ss_pred -----------H-Hhhhh--hcchhHHHHHHHhhhccchhHHH----HHHHHHHHH------hCCChhHHHHHHHHHHHH
Q 009914 216 -----------Q-EAKSV--IKIPSFQIIVAQGVTGSFPWSAL----SFAAMWLEL------TGFSHEKTAFLMALFVIA 271 (522)
Q Consensus 216 -----------~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~g~~~~~~~~~~~~~~~~ 271 (522)
. ..+.. -.+++...++...+....+|... +-+..|.++ +|++ -..+++.++..+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ 320 (493)
T PRK15462 242 VATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFA 320 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHH
Confidence 0 00000 01222323322222222233222 234445543 2332 2255777788887
Q ss_pred HhccchhhhhhhhHhhhc--CC-CchhHHHHHHHHHHHHHHHHHHHHhCCC-CCchhHHHHHHHHHHHHHHhccCCCcch
Q 009914 272 SSLGGLFGGRMGDFLSAR--FP-NSGRIILAQISSLSAIPLAALLLLVLPD-DPSTPVMHGLVLVVTGLFISWNAPATNN 347 (522)
Q Consensus 272 ~~~~~~~~g~l~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 347 (522)
.++.+++.+++-.|..+| .+ ...|..+..+...++..+..+....... ...+.++++...++.+++.-...| +..
T Consensus 321 ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sP-vgl 399 (493)
T PRK15462 321 VMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDP-VAM 399 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHCh-HHH
Confidence 777777777776666332 22 2223333333333332222221111111 113445577888889999999999 999
Q ss_pred hhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 348 PIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
+.++++.|++.+|+.+|+.... .+++++.++|.+.+.
T Consensus 400 s~~~~laP~~~~g~~mg~w~l~---~~~~~~~~~g~~~~~ 436 (493)
T PRK15462 400 SQITRIEIPGVTGVLTGIYMLL---SGAIANYLAGVIADQ 436 (493)
T ss_pred HHHHHhChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 9999999999999999998432 335666666766665
No 109
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.90 E-value=2.8e-22 Score=184.94 Aligned_cols=370 Identities=16% Similarity=0.142 Sum_probs=277.7
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHH
Q 009914 2 KQETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLW 81 (522)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~ 81 (522)
++||.+++.+++..+.+.+.+..++++..+....+| +....-|+..+|++.+....+++-|+.||+|-|...+++..+.
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln 119 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLN 119 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHH
Confidence 578999999999999999999899999888888899 7778889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh------hhHH--HHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 82 AAATFLVAFS------STFA--QVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 82 ~~~~~~~~~~------~~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
+++..+-..+ +.++ ....+..+.+.++-+.......+..-|+++++|+.+..+-.++..+|.++|.++...+
T Consensus 120 ~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 120 GIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred HHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcccee
Confidence 9999887665 2344 6678888888888888877778889999999999999999999999999999999998
Q ss_pred hccc-ccCCCCchH--HHHHHHHHHHHHHHhhhh-ccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHH
Q 009914 154 APMT-FMGIPGWRI--SFHIVGLISVVVGTLVRL-FANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQI 229 (522)
Q Consensus 154 ~~~~-~~~~~gw~~--~f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (522)
.... ..+...|.. .|+..+++..+..++..+ ..+.|+.++.......+ + .+..+..++.++++.+.+
T Consensus 200 V~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~--~-------~~f~~si~~~~~n~~F~i 270 (480)
T KOG2563|consen 200 VPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ--D-------ASFPKSIKSCFKNRQFII 270 (480)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh--c-------CcHHHHHHHHHcCccHHH
Confidence 8764 223345654 455455544444444444 33334433332211111 0 235567778899999888
Q ss_pred HHHHhhhccch-hHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHH
Q 009914 230 IVAQGVTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 308 (522)
Q Consensus 230 ~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (522)
........... ++..+.+..-+...|++...+|++.....+++++++++.|.+.||.++.+ ......... ...
T Consensus 271 l~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk-----~~~~v~~~~-~~v 344 (480)
T KOG2563|consen 271 LAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFK-----LTTLVLYLF-ALV 344 (480)
T ss_pred HHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH-----HHHHHHHHH-HHH
Confidence 77666555543 34444444444456888888999999999999999999999999987764 222211111 111
Q ss_pred HHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHh
Q 009914 309 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 388 (522)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~ 388 (522)
..+.+..........+++.....++|++.....| +...+..|..-|...++..|+.+..+++.+.+-..+.+...+..
T Consensus 345 -~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~P-ig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~ 422 (480)
T KOG2563|consen 345 -GTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLP-IGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDL 422 (480)
T ss_pred -HHHHHHHhhccCCceEehhhhHHHHHHhhcCCCC-cceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhcc
Confidence 1122333333334445567778888888888888 89999999988888999999999999999999999999888873
Q ss_pred h
Q 009914 389 Y 389 (522)
Q Consensus 389 ~ 389 (522)
.
T Consensus 423 ~ 423 (480)
T KOG2563|consen 423 G 423 (480)
T ss_pred C
Confidence 3
No 110
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=1.5e-21 Score=198.18 Aligned_cols=332 Identities=17% Similarity=0.100 Sum_probs=221.0
Q ss_pred HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHH
Q 009914 34 AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAP 113 (522)
Q Consensus 34 ~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 113 (522)
+.+..+.....+..+++.+|..++++++|+++||+|||+++++++++..++.++.++++|++.+++.|++.|++.+....
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 45667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCC
Q 009914 114 AIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPD 193 (522)
Q Consensus 114 ~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~ 193 (522)
....++.|++++++|+.+..+ ......+..+++++++++. .+||+.+++..+..++..++.++.+|+|++..
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~-------~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~ 262 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYIT-------RDWRWLFWIISIPSGLFLLLWFLPPESPRWLL 262 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHccCcChHHHH
Confidence 999999999999999999999 7777778888888888876 48999999999998888777444557787765
Q ss_pred CCCCCCccccc-----------chhhhhhHHH--HH-----------HhhhhhcchhHHHHHHHhhhccchhHHHHH-HH
Q 009914 194 GGTANSDQVSS-----------KSFRSDVKVL--IQ-----------EAKSVIKIPSFQIIVAQGVTGSFPWSALSF-AA 248 (522)
Q Consensus 194 ~~~~~~~~~~~-----------~~~~~~~~~~--~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 248 (522)
.+++.++..+. .......... .+ ....+++.+.+........+....+....+ ++
T Consensus 263 ~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~ 342 (521)
T KOG0255|consen 263 SKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLS 342 (521)
T ss_pred HcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhh
Confidence 54432211100 0000000000 00 012233443222222222222211122222 22
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHH
Q 009914 249 MWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHG 328 (522)
Q Consensus 249 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (522)
.....+|.+.. ......+.....+....+...|+.|||. ..........+.+.... ........ ++..
T Consensus 343 ~~~~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~------~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~ 410 (521)
T KOG0255|consen 343 LNVSGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRP------PLFLSLFLAGIGLLLFG--WLPDDLGG-WLHW 410 (521)
T ss_pred hhhhhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHH------HHHHHHHHHHHHHHHHH--Hhhccchh-HHHH
Confidence 22334554443 3334444466677777789999998873 22222222222222222 12211121 1122
Q ss_pred HHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 009914 329 LVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 386 (522)
Q Consensus 329 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~ 386 (522)
....+..++.+.... ....+..|+.|+..|+.+.+..+....++++++|.+.-....
T Consensus 411 ~~~~~~~~~~~~~~~-~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 411 ILPLLGKFFIGSAFN-LIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 233333333333334 458899999999999999999999999999999988755544
No 111
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.90 E-value=3e-28 Score=243.38 Aligned_cols=365 Identities=18% Similarity=0.155 Sum_probs=243.4
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHH--HhcCCC---------hhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHH
Q 009914 11 VNLAGIMERADESLLPGVYKEVG--AALHTD---------PTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAF 79 (522)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~--~~~g~s---------~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~ 79 (522)
..++.+..+++....+...+... ..++.+ ..+.+++.+...++..++++++|.++||+|||+.+.++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 34555778888777766665554 222222 2357899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh---hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 80 LWAAATFLVAFSS---TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 80 ~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
+..++.++.++++ +++.+.++|++.|++.|...+....++.|..|+++|++..++.+.+..+|.+++..++..+...
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 9999999999999999999999999999999999999999999999999999998887665433
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccc----------hhhhhhHH-HH------HHhh
Q 009914 157 TFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSK----------SFRSDVKV-LI------QEAK 219 (522)
Q Consensus 157 ~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~-~~------~~~~ 219 (522)
.+..+||..+++.++++++..+...++||+|++...+++.++.++.. ...++..+ .. ..++
T Consensus 165 --~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (451)
T PF00083_consen 165 --SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWR 242 (451)
T ss_pred --cccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeee
Confidence 11246999999999998888888888999998875544332211100 00000000 00 1123
Q ss_pred hhhcchh----HHH-HHHHhhhccch-hHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCc
Q 009914 220 SVIKIPS----FQI-IVAQGVTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNS 293 (522)
Q Consensus 220 ~~~~~~~----~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 293 (522)
.+++++. +.. +.+..+..... +....+.+.+++..+.+.. -.......+...++.++..++.||+|||+.
T Consensus 243 ~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~-- 318 (451)
T PF00083_consen 243 DLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKL-- 318 (451)
T ss_pred eccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccc--
Confidence 3444422 111 22222221112 2333456666666676665 233334556677788888899999999953
Q ss_pred hhHHHHHHHHHHHHHHHHHH--HHhCCCCC--chhHHHHHHHHHHHHHHh-ccCCCcchhhhhhhcCcchhHHHHHHHHH
Q 009914 294 GRIILAQISSLSAIPLAALL--LLVLPDDP--STPVMHGLVLVVTGLFIS-WNAPATNNPIFAEIVPEKSRTSVYAMDRS 368 (522)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 368 (522)
.+... ...++....+. .......+ .... ......+...+.+ ...+ ..+.+..|.+|++.|+++.|+...
T Consensus 319 ---~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~l~~~~~~~g~~~-~~~~~~~ElfPt~~R~~~~~~~~~ 392 (451)
T PF00083_consen 319 ---LIIGL-LLMAICSLILGIIFFLGVSSSSWWSIL-SIVFLALFFAFFSLGWGP-LPWIYTAELFPTKVRSTGIGLSYA 392 (451)
T ss_pred ---ccccc-ccccccccccccccccccccccccccc-cceeeeeccccccccccc-cccccccccccccccccccccccc
Confidence 22211 11111111111 11111111 0111 1122222222222 2223 567888999999999999999999
Q ss_pred HHHHHhchhhHHHHHHHHH
Q 009914 369 FESILSSFAPPVVGILAQH 387 (522)
Q Consensus 369 ~~~~~~~i~~~~~g~l~~~ 387 (522)
++.+++.++|.+...+.+.
T Consensus 393 ~~~i~~~i~~~~~~~~~~~ 411 (451)
T PF00083_consen 393 VGRIGGFIIPFLFPYLFNN 411 (451)
T ss_pred ccccccccccccccccccc
Confidence 9999999999988888777
No 112
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.4e-23 Score=180.46 Aligned_cols=365 Identities=15% Similarity=0.089 Sum_probs=244.7
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH-hchhHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR-HNRAHVIALGAFLWA 82 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~grr~~l~~~~~~~~ 82 (522)
|...+...++..|-+++.+.....+..++..+.+++.++..++.+++.....+..+++|++.|| +|-|..-++-++...
T Consensus 42 r~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~ 121 (459)
T KOG4686|consen 42 RFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVF 121 (459)
T ss_pred HHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHH
Confidence 3445566666667778888888888889999999999999999999999999999999999997 677766555555566
Q ss_pred HHHHHHHh---hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccc-
Q 009914 83 AATFLVAF---SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTF- 158 (522)
Q Consensus 83 ~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~- 158 (522)
++.++++. .+.+|.+..+|++.|+|.-..-++-++++.-|+..|+.+.++|+......+|..+--.+.+++.+...
T Consensus 122 ~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~ 201 (459)
T KOG4686|consen 122 LGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGR 201 (459)
T ss_pred HHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHH
Confidence 67666654 57899999999999999888888889999999999999999999999999999877777777665310
Q ss_pred -cCCCCc--hHHHHHHHHHHHHHHHhhhh---ccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHH
Q 009914 159 -MGIPGW--RISFHIVGLISVVVGTLVRL---FANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVA 232 (522)
Q Consensus 159 -~~~~gw--~~~f~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (522)
.+..|- -...+..+.......+.... ..++ +.++.-+.++....+.+... +. .-++ |.+|.+..
T Consensus 202 ~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~-rAerilh~e~g~~Ge~pkLt-------dv-~~f~-ppfw~~~i 271 (459)
T KOG4686|consen 202 MFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDD-RAERILHLEEGFLGEEPKLT-------DV-NTFY-PPFWVLVI 271 (459)
T ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-HHHHHHhhhcCcccCCcccc-------cc-cccC-ccHHHHHH
Confidence 000111 01112222222222222211 1111 11100000000000011110 11 1133 34444444
Q ss_pred Hhhhcc-chhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHH
Q 009914 233 QGVTGS-FPWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLA 310 (522)
Q Consensus 233 ~~~~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (522)
..+.+. ..+.....-|.+++ ++|+|+..++.+.+.......+.+++.|.++||+|++. +........ .+.
T Consensus 272 icv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~------~wv~~a~~~--tl~ 343 (459)
T KOG4686|consen 272 ICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL------WWVASACIL--TLL 343 (459)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee------hhHHHHHHH--HHH
Confidence 433333 34455566777775 69999999999999999999999999999999999983 222111111 111
Q ss_pred HHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 311 ALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
.=..+.+.. .+ -...+.++|+......- ..+..+..++|+++.|+++|.++.++++|-++.|.++|.+.|...+
T Consensus 344 ~H~~l~Ft~--ls---Py~~m~~lGLsysllAc-slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~ 417 (459)
T KOG4686|consen 344 GHSGLFFTF--LS---PYTSMTFLGLSYSLLAC-SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS 417 (459)
T ss_pred HhhhHHhhh--cc---HHHHHHHHhhhHHHHHH-HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc
Confidence 111111111 11 23566677777665555 5788889999999999999999999999999999999999998655
Q ss_pred cc
Q 009914 391 FK 392 (522)
Q Consensus 391 ~~ 392 (522)
|.
T Consensus 418 y~ 419 (459)
T KOG4686|consen 418 YD 419 (459)
T ss_pred hh
Confidence 64
No 113
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.85 E-value=4.5e-19 Score=166.28 Aligned_cols=273 Identities=14% Similarity=0.111 Sum_probs=192.2
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccc----------
Q 009914 90 FSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFM---------- 159 (522)
Q Consensus 90 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~---------- 159 (522)
...+++.++++-++.|.|.+...+..+.++++..++|++++.+++.+.++++|.+++|.+++.+......
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4578999999999999999999999999999999999999999999999999999999999988743110
Q ss_pred -CCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhcc
Q 009914 160 -GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGS 238 (522)
Q Consensus 160 -~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (522)
....|+++|++.+.+.++..++..+.+ -|+.++++.+ +...++. .+.+..+++|.++...+..+++.
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~-~p~~~~~~~~--~~~~~~~---------~~~~~~~~~~~~~l~~~~~f~yv 153 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLP-LPELQEADVA--RVSSGDT---------TQKTSAFQFTHLVLGALGIFVYV 153 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCCCccccc--ccccccc---------cchhhHHhhHHHHHHHHHHHHHH
Confidence 014799999987776666655544432 2221111110 0000000 01123456666776666666665
Q ss_pred c-hhHHHHHHHHHHHH---hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHH
Q 009914 239 F-PWSALSFAAMWLEL---TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLL 314 (522)
Q Consensus 239 ~-~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (522)
. -.+...|.+.|+++ +|+++.+.+...+....+.++|+++.+++.||+++++ .+.... .+..... +..
T Consensus 154 g~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~-----~l~~~~--~l~~~~~-~l~ 225 (310)
T TIGR01272 154 GAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR-----YLAFNA--FLAVLLS-IGA 225 (310)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH-----HHHHHH--HHHHHHH-HHH
Confidence 4 35667899999964 5899999999999999999999999999999999873 332221 1111111 111
Q ss_pred HhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 315 LVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
... +.. . .....++.|++.+..+| ...+...+..|+ +.+++.++. .+..+|+++.|++.|.+.|. .|.
T Consensus 226 ~~~---~~~-~-~~~~~~l~g~~~s~i~P-~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~-~g~ 293 (310)
T TIGR01272 226 ALT---HGY-V-AMWFVLALGLFNSIMFP-TIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADC-LGI 293 (310)
T ss_pred HHc---CCH-H-HHHHHHHHHHHHHHHHH-HHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHh-ccc
Confidence 111 111 1 23455678899988888 778888887774 466777775 57789999999999999998 454
No 114
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.84 E-value=2.4e-18 Score=158.45 Aligned_cols=329 Identities=14% Similarity=0.140 Sum_probs=245.1
Q ss_pred hhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHH-HHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHhhhhHHHH
Q 009914 40 PTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHV-IALGAFLWAAATFLVAFSST---FAQVAISRALNGIGLALVAPAI 115 (522)
Q Consensus 40 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~-l~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~ 115 (522)
.+..|...++..+..++.+|+.|.++|+.|+||. +-+...+..++.+++.++++ ++..++..++..++.....+..
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3457888899999999999999999999996554 66666666777777777754 4455667888889999999999
Q ss_pred HHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh--c-----------ccccCCCCchHHHHHHHHHHHHHHHhh
Q 009914 116 QSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMA--P-----------MTFMGIPGWRISFHIVGLISVVVGTLV 182 (522)
Q Consensus 116 ~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~--~-----------~~~~~~~gw~~~f~~~~~~~~i~~~~~ 182 (522)
.+++.+..++++-++..++-.....+|..+.-+..-... . .+..+...-|..+.+.++..++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 999999999988888877777777777766554432111 1 011123567899999999988888888
Q ss_pred hhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHHHHHHHH-HhCCChhH
Q 009914 183 RLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSFAAMWLE-LTGFSHEK 260 (522)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~g~~~~~ 260 (522)
++..++++... ....+......++.....++..+++.+..+++..+++.- ..+...+...|.. ++|++..+
T Consensus 217 ~~~v~~~~~~~-------~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~ 289 (438)
T COG2270 217 ILNVHDAEKIS-------SPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTE 289 (438)
T ss_pred Hhccccccccc-------ccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHH
Confidence 87766654321 111233344557777778888888877777666555544 5677778888887 79999999
Q ss_pred HHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhc
Q 009914 261 TAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISW 340 (522)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 340 (522)
...+.....+.+++|+++.|++.||++.|+ .+...+......++.. +. . .....+.++..+.|++.+.
T Consensus 290 lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~-----vl~~~lvi~~~~~~~~--~~--~---~~~~~f~i~gll~g~s~G~ 357 (438)
T COG2270 290 LLLIGIALSVVAALGAIIAGFLDERFGSKP-----VLMIGLVILSIAALYL--IF--L---EGELDFWILGLLVGTSLGG 357 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCce-----eehHHHHHHHHHHHHH--HH--c---cccHHHHHHHHHHHHhcch
Confidence 999999999999999999999999999984 2232222222221111 11 1 1123355666788888888
Q ss_pred cCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHh
Q 009914 341 NAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 388 (522)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~ 388 (522)
.+. ...++..+.+|+++.++.+|+++..+...+.+||.+.+.+.+.+
T Consensus 358 ~qA-~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT 404 (438)
T COG2270 358 AQA-SSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT 404 (438)
T ss_pred HHH-HHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh
Confidence 888 88999999999999999999999999999999999999999984
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.83 E-value=2e-17 Score=153.07 Aligned_cols=333 Identities=15% Similarity=0.108 Sum_probs=230.8
Q ss_pred HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhc-----hhHH-HHHHHHHHHHHHHHHHhh-----h-------
Q 009914 31 EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHN-----RAHV-IALGAFLWAAATFLVAFS-----S------- 92 (522)
Q Consensus 31 ~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g-----rr~~-l~~~~~~~~~~~~~~~~~-----~------- 92 (522)
.+..|++++..-.+.+.+...+..- ..+.+|+.+|+.+ ||.. +..|.++.+.+..+.+++ .
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 4667899999999999999888766 6999999999988 7765 555666666665555443 2
Q ss_pred hH--H--HHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCch---
Q 009914 93 TF--A--QVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWR--- 165 (522)
Q Consensus 93 ~~--~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~--- 165 (522)
+. + ...+.-.+.|+|.+....+..+++.|..|+|+|+++.++.....-+|.+++..+.+.+.+. +.-.
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~-----~s~~rL~ 158 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP-----FSPERLI 158 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc-----cCHHHHH
Confidence 11 1 2345677889999999999999999999999999999999999999999999999988865 3322
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchhHHH-
Q 009914 166 ISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL- 244 (522)
Q Consensus 166 ~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 244 (522)
.++...+++.++..++..+-. |++..+... ..++++ ....+.+++++.+|....+....+.....+...
T Consensus 159 ~v~~~~a~i~~~l~~ia~wg~-E~r~~~~~~--~~~~~~-------~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD 228 (403)
T PF03209_consen 159 QVIQGVALIALLLNLIALWGQ-EPRRSRRAA--AAERPR-------PPFREAWRQVWASPQARRFFVFLFLGTLAFFMQD 228 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ccCCccccc--CCCCCC-------ccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhH
Confidence 233333333333333333333 333222221 111111 222234455556666666665555555544433
Q ss_pred HHHHHHH-HHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCch
Q 009914 245 SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPST 323 (522)
Q Consensus 245 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (522)
..+-.|- +.+|++..+...+....+.+.+++..+.|++..|...++ +.... .+..+...+..+.+.. ...+
T Consensus 229 ~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~----~~a~~-G~~~~~~~f~lii~a~---~~~~ 300 (403)
T PF03209_consen 229 VILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK----RTAAL-GCLLGALAFALIILAG---PLGS 300 (403)
T ss_pred HHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch----HHHHH-HHHHHHHHHHHHHHHH---hccc
Confidence 3455555 459999999999999999999999999998877432221 22221 1222222222222222 1233
Q ss_pred hHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHh
Q 009914 324 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 388 (522)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~ 388 (522)
.+.+....+++|++.+.... ...+.+.+..++++.|..+|.....+.+...++..++|.+.|..
T Consensus 301 ~~~~~~~~~l~G~g~G~f~v-gals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 301 PWLFRPGVFLLGLGNGLFTV-GALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred chHHHHHHHHHHHhhhHHHH-HHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55577888999999998888 78889999999999999999999999999999999999999984
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.81 E-value=8.6e-17 Score=151.74 Aligned_cols=372 Identities=17% Similarity=0.117 Sum_probs=246.6
Q ss_pred chHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHhcC----CChhhhHHHHHHHHHHHHhhhhhHHHHHHH-hchhHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLL-PGVYKEVGAALH----TDPTGLGSLTLFRSIVQASCYPIAAYLAIR-HNRAHVIALG 77 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g----~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~grr~~l~~~ 77 (522)
+.+.+..+...-+...+.++.. .++.-++..+++ .++++..-+.+++....-+...++|+++|| +|+|+.+..|
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lG 98 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLG 98 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 3466777888888888877654 455556667777 999999888888888888899999999999 5999999999
Q ss_pred HHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCC--chhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 78 AFLWAAATFLVAFSS--TFAQVAISRALNGIGLALVAPAIQSLVADSTDDS--NRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 78 ~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
.+++.+|.++.+... +...++++..+.++|.|..-+...+++.|.+|++ +|...++++.++.++|+.++|.+.+++
T Consensus 99 ail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~ 178 (498)
T COG3104 99 AILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLL 178 (498)
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHH
Confidence 999999999999884 7889999999999999999999999999999764 478899999999999999999999999
Q ss_pred hcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCC--cccccchhh------------------hhhH-
Q 009914 154 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANS--DQVSSKSFR------------------SDVK- 212 (522)
Q Consensus 154 ~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------------------~~~~- 212 (522)
.+. +||...|-+.++-..+..+..+..++.-......++.. ........+ +...
T Consensus 179 ~~~-----~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 253 (498)
T COG3104 179 AIN-----YGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSG 253 (498)
T ss_pred HHh-----hCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 99999999998877766666555543211111111000 000000000 0000
Q ss_pred ---------------HHHHHhhhhhcchhHHHHHHHhhhccchhHHH----HHHHHHHHH------hCCChhHHHHHHHH
Q 009914 213 ---------------VLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL----SFAAMWLEL------TGFSHEKTAFLMAL 267 (522)
Q Consensus 213 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~g~~~~~~~~~~~~ 267 (522)
+..+..+..-.+++.+..+..++....+|... +-+..|.++ +|++ -..+++.++
T Consensus 254 ~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQsl 332 (498)
T COG3104 254 VLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSL 332 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHhh
Confidence 00000000011122222322222222233222 233444422 2222 234577778
Q ss_pred HHHHHhccchhhhhhhhHhhhcC--C-CchhHHHHHHHHHHHHHHHHHHHHhCC--CCCchhHHHHHHHHHHHHHHhccC
Q 009914 268 FVIASSLGGLFGGRMGDFLSARF--P-NSGRIILAQISSLSAIPLAALLLLVLP--DDPSTPVMHGLVLVVTGLFISWNA 342 (522)
Q Consensus 268 ~~~~~~~~~~~~g~l~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~ 342 (522)
..+.-++.+++..++..|.++++ + ...+.-+......++..+......... ....+.++.+...++.+++.-+..
T Consensus 333 Np~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iS 412 (498)
T COG3104 333 NPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFIS 412 (498)
T ss_pred CHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhC
Confidence 78888888888888887754442 2 222333333322332222222211122 333455667888999999999999
Q ss_pred CCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHH
Q 009914 343 PATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVG 382 (522)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g 382 (522)
| +..+++.+..|+...+..+|+.......+..++..+.+
T Consensus 413 p-vGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 413 P-VGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred H-HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 9 99999999999998888888887776666666665555
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.81 E-value=8.2e-18 Score=166.93 Aligned_cols=284 Identities=19% Similarity=0.278 Sum_probs=232.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~ 85 (522)
..+.++++..+...+....+...+..+.+.++++.++.|++.+.+-++..+...+..++.-|..|-+++-+|.++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 45666777788888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh--------------------h--------------------------------hHHHHHHHHHHHHHHhhhhHH
Q 009914 86 FLVAFS--------------------S--------------------------------TFAQVAISRALNGIGLALVAP 113 (522)
Q Consensus 86 ~~~~~~--------------------~--------------------------------~~~~l~~~r~l~G~~~~~~~~ 113 (522)
+++++- + -+..++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 998762 0 022567789999999999999
Q ss_pred HHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccC--------------CCCchHHHHHHHHHHHHHH
Q 009914 114 AIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMG--------------IPGWRISFHIVGLISVVVG 179 (522)
Q Consensus 114 ~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~--------------~~gw~~~f~~~~~~~~i~~ 179 (522)
...+++-|...+++-...+|++.....+|.++|-++++++......- ...|..-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987532100 1248888999999999999
Q ss_pred HhhhhccCCCCCCCC-----CCC--CCc---ccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccch-hHHHHHHH
Q 009914 180 TLVRLFANDPHFPDG-----GTA--NSD---QVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFP-WSALSFAA 248 (522)
Q Consensus 180 ~~~~~~~~~~~~~~~-----~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 248 (522)
+..+++|++.+...+ +.+ +++ .+......+++++..+..+++++||.+...++..++.... .++.+|+|
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlP 416 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLP 416 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhH
Confidence 999999987543321 000 011 1223334456778888899999999999888877777764 57778999
Q ss_pred HHHH-HhCCChhHHHHHHHHHHH-HHhccchhhhhhhhHhhhc
Q 009914 249 MWLE-LTGFSHEKTAFLMALFVI-ASSLGGLFGGRMGDFLSAR 289 (522)
Q Consensus 249 ~~~~-~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~~~~~~~ 289 (522)
-|++ ++|.++..+..+.....+ +..+|.+++|++.+|+..+
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 9997 699999999999977666 5557888999999998665
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.77 E-value=1.8e-20 Score=186.51 Aligned_cols=377 Identities=19% Similarity=0.278 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFL 87 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~ 87 (522)
+..+++..+............+..+.+.|+++.++.|++.+.+-++..+..++..++.+|..|-|++-+|.++.+++.++
T Consensus 5 l~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 5 LVFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHH
Confidence 34455556666777778888999999999999999999999999999999999999999988889999999999999998
Q ss_pred HHhhh--------------------------------------------------hHHHHHHHHHHHHHHhhhhHHHHHH
Q 009914 88 VAFSS--------------------------------------------------TFAQVAISRALNGIGLALVAPAIQS 117 (522)
Q Consensus 88 ~~~~~--------------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~ 117 (522)
+++-+ -+..++++.++.|+|.+..++...+
T Consensus 85 ~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 85 FALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred HhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 76520 0244678999999999999999999
Q ss_pred HHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc----ccC-------------CCCchHHHHHHHHHHHHHHH
Q 009914 118 LVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT----FMG-------------IPGWRISFHIVGLISVVVGT 180 (522)
Q Consensus 118 ~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~----~~~-------------~~gw~~~f~~~~~~~~i~~~ 180 (522)
++-|..++++-+.++|+..+...+|.++|-++++.+.... ..+ ...|..-|++.+++.++..+
T Consensus 165 YiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ai 244 (539)
T PF03137_consen 165 YIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAI 244 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999877431 000 12488889999999999988
Q ss_pred hhhhccCCCCCCC-C--CC-----CCCcc--c--cc----chhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHH
Q 009914 181 LVRLFANDPHFPD-G--GT-----ANSDQ--V--SS----KSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSA 243 (522)
Q Consensus 181 ~~~~~~~~~~~~~-~--~~-----~~~~~--~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 243 (522)
..+.+|++-+... . .+ +.++. + .+ +......++..+..+++++||.+....+....... ..+.
T Consensus 245 pl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~ 324 (539)
T PF03137_consen 245 PLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGF 324 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 8888887633220 0 00 00000 0 00 11123456777888899999999888777776666 4577
Q ss_pred HHHHHHHHH-HhCCChhHHHHHHHHHHH-HHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHH-HHHHHHhCC--
Q 009914 244 LSFAAMWLE-LTGFSHEKTAFLMALFVI-ASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPL-AALLLLVLP-- 318 (522)
Q Consensus 244 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-- 318 (522)
.+|.|-|++ +++.++.+++.+.....+ +.++|.+++|++.+|++-+.....+.... ..++.+.. ...+++.-+
T Consensus 325 ~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v--~~~v~~~~~~~~~~~~C~~~ 402 (539)
T PF03137_consen 325 ATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIV--VSIVSVILYSPLFFLGCPNP 402 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHH--HHHHHHHHHHHHHeecCCCC
Confidence 789999997 699999999988877655 67789999999999987653221111111 11111111 111111100
Q ss_pred --------C-------C----------------------------CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcC
Q 009914 319 --------D-------D----------------------------PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP 355 (522)
Q Consensus 319 --------~-------~----------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 355 (522)
. . ....+.+.+..++..+..+.... .......+.+|
T Consensus 403 ~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~-p~~~i~LR~V~ 481 (539)
T PF03137_consen 403 PIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQV-PSTLITLRCVP 481 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhccc-chheeeeccCC
Confidence 0 0 00112233333333344444444 45667778999
Q ss_pred cchhHHHHHHHHHHHHHH-hchhhHHHHHHHHH
Q 009914 356 EKSRTSVYAMDRSFESIL-SSFAPPVVGILAQH 387 (522)
Q Consensus 356 ~~~~~~~~g~~~~~~~~~-~~i~~~~~g~l~~~ 387 (522)
+++|+.+.|+...+..+. ..-+|.+.|.+.|.
T Consensus 482 ~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 482 PEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ---------------------------------
T ss_pred hhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 999999999999887754 57799999999998
No 119
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.76 E-value=2.1e-17 Score=157.75 Aligned_cols=375 Identities=12% Similarity=0.090 Sum_probs=233.2
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhhhhHHHHHHHh--cCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhch-hHHHHHHH
Q 009914 2 KQETVTLVLVNLAGIMERADESLLPGVYKEVGAA--LHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNR-AHVIALGA 78 (522)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~gr-r~~l~~~~ 78 (522)
+.+|+.+++..+..++.....+++.+..-++.++ .+.+.+..|++.++..++.+++++.+|++..|.+. |+.++.+.
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 4578999999999999999988877666555565 77888899999999999999999999999999986 88899999
Q ss_pred HHHHHHHHHHH-hh---h-hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 79 FLWAAATFLVA-FS---S-TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 79 ~~~~~~~~~~~-~~---~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
++..++.++.. +. + ..+.++++|++.|+|.+... ...+++++....++|.++++....+..+|.++||.++..+
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 99999999883 32 2 56888999999999966554 6679999988889999999999999999999999998887
Q ss_pred hccccc--------CCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcch
Q 009914 154 APMTFM--------GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIP 225 (522)
Q Consensus 154 ~~~~~~--------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (522)
...... ...-+..+-|+.+++.++..++..+..+|+.....+++.+++++.+.. ++..+..+ +..+
T Consensus 189 ~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~d~~ 262 (488)
T KOG2325|consen 189 TPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEEKSD----IEKVKKPK--LDWV 262 (488)
T ss_pred hhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhhccc----hhhhccCC--hhHH
Confidence 643211 111245677788888888888777766665444332211111101000 00000000 0111
Q ss_pred hHHHHHHHhhhccc-hhHHHHHHHHH-HHHhCCChhHHHH----HHHHHHHHHhccchhhhhhh-hHhhhcCCCchhHHH
Q 009914 226 SFQIIVAQGVTGSF-PWSALSFAAMW-LELTGFSHEKTAF----LMALFVIASSLGGLFGGRMG-DFLSARFPNSGRIIL 298 (522)
Q Consensus 226 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~g~l~-~~~~~~~~~~~~~~~ 298 (522)
..+.++...+.... .....+..+.+ ...++++..++-. +.++.++..+.-.+...... .++.+|. .+.
T Consensus 263 ~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~-----~~~ 337 (488)
T KOG2325|consen 263 AVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRR-----IIL 337 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccce-----eee
Confidence 11122222222222 22223333333 3346665554433 33333333333333333222 1212221 111
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCC---------------------------chhHHHHHHHHHHHHHHhccCCCcchhhhh
Q 009914 299 AQISSLSAIPLAALLLLVLPDDP---------------------------STPVMHGLVLVVTGLFISWNAPATNNPIFA 351 (522)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 351 (522)
... +..+....+....+.... +.+..+....+.+|.+.-.... ...++.+
T Consensus 338 ~g~--l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~-~~~tlyS 414 (488)
T KOG2325|consen 338 LGF--LIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFIST-ALDTLYS 414 (488)
T ss_pred ehH--HHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccc-hHHHHHH
Confidence 111 111111111111111100 0011122234445555555555 6788999
Q ss_pred hhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcc
Q 009914 352 EIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 352 ~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~ 392 (522)
+...+.+++++.|++......+..++|.+...+... .|++
T Consensus 415 kiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~-~g~~ 454 (488)
T KOG2325|consen 415 KILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTL-SGPR 454 (488)
T ss_pred HHhCCccccceeEEEEeccchhhhhhHHHHhhhHHh-cCcc
Confidence 999999999999999999999999999999888888 6764
No 120
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.72 E-value=1e-15 Score=150.07 Aligned_cols=350 Identities=19% Similarity=0.164 Sum_probs=226.8
Q ss_pred hhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhc-----hhHHHHHHHHHHHHHHHHHHhhh----hHH
Q 009914 25 LPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHN-----RAHVIALGAFLWAAATFLVAFSS----TFA 95 (522)
Q Consensus 25 ~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g-----rr~~l~~~~~~~~~~~~~~~~~~----~~~ 95 (522)
.....|.+.+++|+++++...+.++..+...+ .++.|.++|-+. ||+-++++.++.+++.+.++..+ +..
T Consensus 9 ~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 9 RLAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 45667889999999999999999999998884 899999999863 45557778877766666666543 466
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhccC--CCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHH
Q 009914 96 QVAISRALNGIGLALVAPAIQSLVADSTD--DSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGL 173 (522)
Q Consensus 96 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~ 173 (522)
...+.-++..+|.+.....+.+++.|... ++.|+...+.......+|.+++..++|.+.+. .+++..|.+.++
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~-----~~~~~~f~i~~~ 162 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS-----FGPQGVFLISAA 162 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc-----CCCeEEehHHHH
Confidence 66777788899999999999999999884 33478888999999999999999999999988 889999999988
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCC-CcccccchhhhhhHHHHHHhhhhhcchhHHHHHH-HhhhccchhHHHHHHHHHH
Q 009914 174 ISVVVGTLVRLFANDPHFPDGGTAN-SDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVA-QGVTGSFPWSALSFAAMWL 251 (522)
Q Consensus 174 ~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 251 (522)
+.++..+...++.+|.+..+..+.. ..++.........++..+..++.++.+.++.... ..++.........-...|.
T Consensus 163 ~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~ 242 (433)
T PF03092_consen 163 LPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYF 242 (433)
T ss_pred HHHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEE
Confidence 8887777777766652111111100 0111111122224666677777777777765544 2222221111000001111
Q ss_pred --HHhC---CChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCC-----C-C
Q 009914 252 --ELTG---FSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP-----D-D 320 (522)
Q Consensus 252 --~~~g---~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~ 320 (522)
...+ +++...+.+..+..++.++|..+..+...+..-| .+......+..+ ....-+.... . .
T Consensus 243 ~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R------~~~~~t~~~~~~-~~l~~~~lv~~~n~~~Gi 315 (433)
T PF03092_consen 243 QTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWR------RIFVVTTLVSVL-ASLFDLLLVTRWNLDLGI 315 (433)
T ss_pred EeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH------HHHHHHHHHHHH-HhcccEEEEEEEeeeeCc
Confidence 2345 8888888888777777777777766555444444 222211111111 1110000000 0 1
Q ss_pred CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 321 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
++.+. ...--++..+....... ....++++++|+...|+.+++..++.+++..++..++..+.+. ++
T Consensus 316 ~d~~f-~lgd~~l~~~~~~i~~m-P~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~-~~ 382 (433)
T PF03092_consen 316 PDQWF-ALGDTILEEVIGMIAFM-PSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMEL-FG 382 (433)
T ss_pred CCeEE-EEEhHHHHHHHHHHHHH-HHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cC
Confidence 11111 11222333333333333 4678899999999999999999999999999999999999888 45
No 121
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.68 E-value=6.1e-15 Score=143.23 Aligned_cols=359 Identities=16% Similarity=0.154 Sum_probs=233.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChh-hhHHHHHHH----HHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALHTDPT-GLGSLTLFR----SIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~g~~~s~~----~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
.....+-.+..++.........+......+.... ..+...... .+...+.++..|.++||+|||..+....+...
T Consensus 24 ~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~ 103 (463)
T KOG2816|consen 24 EPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTI 103 (463)
T ss_pred HHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHH
Confidence 3444455555555555555666666655554332 233333333 67888899999999999999999999999888
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHH--HhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGI--GLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMG 160 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~--~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~ 160 (522)
+..+...+.. +|.++ +.++ +.+.......++++|....++|...+++.......+..++|.+++.+...
T Consensus 104 l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~---- 174 (463)
T KOG2816|consen 104 LPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF---- 174 (463)
T ss_pred HhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh----
Confidence 8888777765 33333 3333 23555667789999999999999999999999999999999999999988
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCC-CC-cccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhcc
Q 009914 161 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTA-NS-DQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGS 238 (522)
Q Consensus 161 ~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (522)
.|.-.+|.+..+..++..+...+..+|+..++.+.. .. +............+..+.....-.+|..+.++...+...
T Consensus 175 -~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~ 253 (463)
T KOG2816|consen 175 -LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSS 253 (463)
T ss_pred -cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHH
Confidence 899999999999999888888887766554443331 00 001111111122233333333333344443333222222
Q ss_pred c-hhHHHH-HHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhh-hhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHH
Q 009914 239 F-PWSALS-FAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGG-RMGDFLSARFPNSGRIILAQISSLSAIPLAALLL 314 (522)
Q Consensus 239 ~-~~~~~~-~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (522)
. ...... ..+.|++ .++++..+.+.+.+..+....++.++.. .+...++.++ . +..++..-.....+
T Consensus 254 ~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~-----~----i~lGl~~~~~~~~~ 324 (463)
T KOG2816|consen 254 LPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR-----L----ISLGLLSEFLQLLL 324 (463)
T ss_pred HHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----H----hhHHHHHHHHHHHH
Confidence 1 111111 2345555 5899999999999998888888887666 6677777773 1 11122222222222
Q ss_pred HhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 315 LVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
..+.... |..+.. ...........+ ...+.++..++++++|+++++...+..+...++|.+.+.++..+..
T Consensus 325 ~af~~~~---w~~~~~-~v~~~~~~~~~p-a~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~ 395 (463)
T KOG2816|consen 325 FAFATET---WMMFAA-GVVVALAGIVFP-AIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLD 395 (463)
T ss_pred HHHhccc---hhhhHH-HHHHHhhcchhH-HHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 2222222 212222 223333444555 6889999999999999999999999999999999999999877543
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.62 E-value=7.6e-15 Score=121.23 Aligned_cols=136 Identities=27% Similarity=0.433 Sum_probs=123.1
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCC
Q 009914 47 TLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDS 126 (522)
Q Consensus 47 ~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 126 (522)
.+.+.++..++.++.|++.||+|||+.+..+.....++.+.....++++.+.+.+++.|++.+...+...+++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34566788899999999999999999999999999999888888899999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccC
Q 009914 127 NRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFAN 187 (522)
Q Consensus 127 ~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 187 (522)
+|++.+++.+....+|..+++.+.+.+.+. .+|++.|++.++..++..+..+++.+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQF-----LGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-----cchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999877 79999999988887777777666543
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.62 E-value=3.4e-14 Score=139.74 Aligned_cols=180 Identities=16% Similarity=0.200 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhcCCCh--------hhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 11 VNLAGIMERADESLLPGVYKEVGAALHTDP--------TGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~--------~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
+.+..++............+.+.++.|.++ ...+.+.++..+...++.++.|+++||+|+|+++.++.++.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~ 292 (418)
T TIGR00889 213 FFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWA 292 (418)
T ss_pred HHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 333344433333344455566666666543 567999999999999999999999999999999999999988
Q ss_pred HHHHHHHhhh----hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHH-HHHHHHHHHHHHHHHhhhccc
Q 009914 83 AATFLVAFSS----TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQ-LTSNIGSLVGGLFSVVMAPMT 157 (522)
Q Consensus 83 ~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~lg~~~g~~l~~~l~~~~ 157 (522)
++..+..... +++.+++.+++.|++.+...+....++.|++|+++|++++++.+ ...++|.++||+++|.+.+..
T Consensus 293 v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~ 372 (418)
T TIGR00889 293 LRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKM 372 (418)
T ss_pred HHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 8877666632 24567788999999999999999999999999999999999997 678999999999999998762
Q ss_pred c-cCCCCchHHHHHHHHHHHHHHHhhhhccCCCC
Q 009914 158 F-MGIPGWRISFHIVGLISVVVGTLVRLFANDPH 190 (522)
Q Consensus 158 ~-~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~ 190 (522)
. .+..||+..|.+.+++.++..++.+++.+++.
T Consensus 373 g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 373 FAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 1 11146999999999988888888877666553
No 124
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.61 E-value=1.2e-12 Score=119.58 Aligned_cols=256 Identities=14% Similarity=0.113 Sum_probs=169.9
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhh
Q 009914 13 LAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSS 92 (522)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~ 92 (522)
..+.+........+|..-.+-+++|.+..|++.+..+.....++..++.|.++||+|||+..++-+++.+++++. -..+
T Consensus 41 ~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~ 119 (354)
T PF05631_consen 41 LVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSS 119 (354)
T ss_pred HHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-Hhcc
Confidence 334444555566666666666789999999999999999999999999999999999999999999999988864 4568
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHhhcc-----CCCchhHHHHHHH-HHHHHHHHHHHHHHHhhhcccccCCCCchH
Q 009914 93 TFAQVAISRALNGIGLALVAPAIQSLVADST-----DDSNRGVAFGWLQ-LTSNIGSLVGGLFSVVMAPMTFMGIPGWRI 166 (522)
Q Consensus 93 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-----~~~~r~~~~~~~~-~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~ 166 (522)
+++.++++|++.|++.+..+.+-.++...-. |++..+..++... ..+++-.+++.+++.++.+.. ..|-..
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~---~~g~va 196 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF---GFGPVA 196 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh---CCCCcc
Confidence 9999999999999999999998888764322 2222333333333 234444556666666666541 024478
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHH-HHHhhhccchhHHH-
Q 009914 167 SFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQII-VAQGVTGSFPWSAL- 244 (522)
Q Consensus 167 ~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~- 244 (522)
+|....++.++..++....-+|......++ .+.. +...+..+.++++|.++.+ ++..++-...|.+.
T Consensus 197 PF~~a~~~l~~~~~~I~~~W~ENyg~~~~~--------~~~~---~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVf 265 (354)
T PF05631_consen 197 PFDAAIVLLAVAAVLILKTWPENYGDTSSS--------SSLS---GSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVF 265 (354)
T ss_pred hHHHHHHHHHHHHHHHHhcccccCCCcccc--------cchH---HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHhee
Confidence 898888877777776655333321111110 0111 2233445566677776665 44444444444332
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhH
Q 009914 245 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF 285 (522)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 285 (522)
.|.|..-. +-...-.|++++.+.+..++|+.+..++..+
T Consensus 266 lWtPaL~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 266 LWTPALDP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred eeeceecC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45665541 1112337899999999999999888766554
No 125
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.59 E-value=1.6e-13 Score=141.25 Aligned_cols=138 Identities=14% Similarity=0.135 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q 009914 44 GSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADST 123 (522)
Q Consensus 44 g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 123 (522)
.+...+..++..++.++.|+++||+|||++++++.++.+++.+++++.++...+++.+++.|++.+..++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456677888999999999999999999999999999999999999988888888889999988888999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccC
Q 009914 124 DDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFAN 187 (522)
Q Consensus 124 ~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 187 (522)
|.++|++++|+..+...+|.++||++++.+... +...+|++.+++.++.+++.+++|+
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~------~~~~pf~i~a~~lll~~ll~~~LPE 735 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI------TKAAPILFASAALACGGLLALKLPD 735 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999988764 4677888888887777777766653
No 126
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.56 E-value=6.7e-13 Score=133.71 Aligned_cols=171 Identities=11% Similarity=-0.019 Sum_probs=128.5
Q ss_pred HHHhhhhhhHHHHHH-HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHH-H--HhhhhH
Q 009914 19 RADESLLPGVYKEVG-AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFL-V--AFSSTF 94 (522)
Q Consensus 19 ~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~-~--~~~~~~ 94 (522)
....+.....+|.+. +.+|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.+. . ..+++.
T Consensus 263 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (490)
T PRK10642 263 NVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVI 342 (490)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 334444455566654 678999888888888888999999999999999999999988877654433322 2 223457
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHH
Q 009914 95 AQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLI 174 (522)
Q Consensus 95 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~ 174 (522)
..+++++++.|++.+........++.+.+|++.|++++++......++..++|.+.+++.+.. .+|+.++++..+.
T Consensus 343 ~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~----~~~~~~~~~~~~~ 418 (490)
T PRK10642 343 GLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST----QNLMMPAYYLMVV 418 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCchHHHHHHHHH
Confidence 778888999998877777778888999999999999999865556666788888888887641 3578777777777
Q ss_pred HHHHHHhhhhccCCCCCCC
Q 009914 175 SVVVGTLVRLFANDPHFPD 193 (522)
Q Consensus 175 ~~i~~~~~~~~~~~~~~~~ 193 (522)
+++..+..+++||+|++..
T Consensus 419 ~~i~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 419 AVIGLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHhccccCCCC
Confidence 7777777677777776544
No 127
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.56 E-value=4.4e-13 Score=131.79 Aligned_cols=162 Identities=17% Similarity=0.143 Sum_probs=135.6
Q ss_pred hhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 009914 22 ESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISR 101 (522)
Q Consensus 22 ~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 101 (522)
.......+|.+.++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T PRK05122 232 FGTIATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGA 309 (399)
T ss_pred HHHHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 33344455555556665 3456677888889999999999999999999999999888888888888888888888899
Q ss_pred HHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHh
Q 009914 102 ALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTL 181 (522)
Q Consensus 102 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~ 181 (522)
++.|++.+...+.....+.+..|+++|++++++.+....+|..+++.+.+.+.+. .||+..|++.+++.++..++
T Consensus 310 ~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~~~~~~~~~~~~~~~ 384 (399)
T PRK05122 310 ALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-----FGYPSIFLAAALAALLGLAL 384 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCHHHHHHHHHHHHHHHHHH
Confidence 9999999998988888888999999999999999999999999999999999887 79999999998888887777
Q ss_pred hhhccCCCC
Q 009914 182 VRLFANDPH 190 (522)
Q Consensus 182 ~~~~~~~~~ 190 (522)
.++++++++
T Consensus 385 ~~~~~~~~~ 393 (399)
T PRK05122 385 TWLLYRRAP 393 (399)
T ss_pred HHHhccccc
Confidence 666655443
No 128
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.56 E-value=6e-13 Score=131.23 Aligned_cols=170 Identities=14% Similarity=0.017 Sum_probs=137.4
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhh
Q 009914 14 AGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSST 93 (522)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~ 93 (522)
..+.............|.+.++.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.+..+++.++..+.++
T Consensus 228 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (406)
T PRK11551 228 SYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPS 307 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 33333333344455567888889999999999999999999999999999999999999988877777777777777778
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHH
Q 009914 94 FAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGL 173 (522)
Q Consensus 94 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~ 173 (522)
.+.+.+..++.|++.+...+...+++.|.+|+++|++.+++.+....+|..+||.+++.+.+.. .+|...+++.+.
T Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~----~~~~~~~~~~~~ 383 (406)
T PRK11551 308 FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG----RSTVGVIGASIP 383 (406)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC----CchHHHHHHHHH
Confidence 8778888888898888888888999999999999999999999999999999999999998751 356666766666
Q ss_pred HHHHHHHhhhhccC
Q 009914 174 ISVVVGTLVRLFAN 187 (522)
Q Consensus 174 ~~~i~~~~~~~~~~ 187 (522)
..++..+..++..+
T Consensus 384 ~~~~~~~~~~~~~~ 397 (406)
T PRK11551 384 VILVAALAALLLVS 397 (406)
T ss_pred HHHHHHHHHHHHhc
Confidence 65555555555443
No 129
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.55 E-value=5.3e-13 Score=128.78 Aligned_cols=171 Identities=20% Similarity=0.255 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHhc-CCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhH-HHHHHHHHHHHHHH
Q 009914 9 VLVNLAGIMERADESLLPGVYKEVGAAL-HTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAH-VIALGAFLWAAATF 86 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~-~l~~~~~~~~~~~~ 86 (522)
....+..+.............|.+.++. |.++.+.+++.+...++..++.++.|++.||+|||+ .+..+..+..++.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 257 (352)
T cd06174 178 LLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLL 257 (352)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3344445555555566666677666655 999999999999999999999999999999999999 99999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchH
Q 009914 87 LVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRI 166 (522)
Q Consensus 87 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~ 166 (522)
.....++.+.+.+..++.|++.+...+...+++.|..|+++|++.+++.+....+|..+++.+.+.+.+. .+|+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~-----~~~~~ 332 (352)
T cd06174 258 LLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT-----GGYGG 332 (352)
T ss_pred HHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCcch
Confidence 9999889999999999999999999999999999999999999999999999999999999999999987 89999
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 009914 167 SFHIVGLISVVVGTLVRL 184 (522)
Q Consensus 167 ~f~~~~~~~~i~~~~~~~ 184 (522)
.|++.+++.++..+..++
T Consensus 333 ~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 333 VFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHHHHHHhee
Confidence 999999988887776544
No 130
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.55 E-value=1.1e-12 Score=128.46 Aligned_cols=155 Identities=14% Similarity=0.073 Sum_probs=127.8
Q ss_pred hhhHHHH-HHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 009914 25 LPGVYKE-VGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRAL 103 (522)
Q Consensus 25 ~~~~~~~-~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 103 (522)
+....|. +.+++|.++.+.+++.+...+...++.++.|+++||+|||+.+..+.....+........++.+.+++.+++
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3444554 557789999999999888888888899999999999999998887776666555555566778888888998
Q ss_pred HHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhh
Q 009914 104 NGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVR 183 (522)
Q Consensus 104 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~ 183 (522)
.+++.+...+....+..|..|+ +|++++++.+....+|..+++.+++.+.+. .||+..|++.+++.++..++.+
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~-----~g~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEI-----WNYHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHH
Confidence 8888888777777888898875 589999999999999999999999999987 7999999988887777666665
Q ss_pred hc
Q 009914 184 LF 185 (522)
Q Consensus 184 ~~ 185 (522)
+.
T Consensus 389 ~~ 390 (393)
T PRK15011 389 RI 390 (393)
T ss_pred hh
Confidence 54
No 131
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.54 E-value=2.7e-13 Score=134.12 Aligned_cols=149 Identities=13% Similarity=0.173 Sum_probs=130.8
Q ss_pred hcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHH
Q 009914 35 ALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPA 114 (522)
Q Consensus 35 ~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 114 (522)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 34677788999999999999999999999999999999999999999998888888899999999999999998888888
Q ss_pred HHHHHhhccCCCchhHHHHH-HHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCC
Q 009914 115 IQSLVADSTDDSNRGVAFGW-LQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFAND 188 (522)
Q Consensus 115 ~~~~i~~~~~~~~r~~~~~~-~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 188 (522)
...++.+.+|++.|+...+. .+....+|.++++.+.+++.+. .||+..|.+.+++.++..++.++..++
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~-----~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS-----IGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh-----hCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88999999999888877655 6777889999999999999987 899999999888887777666665444
No 132
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.54 E-value=8.8e-11 Score=112.90 Aligned_cols=363 Identities=13% Similarity=0.052 Sum_probs=222.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcC-CChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALH-TDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAA 84 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~ 84 (522)
+....+....++...+.-++.+..|.+..+.. -+---.+...-.-.+..+++++..|.+.||..|.+++..+.+.--++
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLS 81 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHH
Confidence 44567788889999998899998887776663 24444555556666777888999999999999988876665443222
Q ss_pred ----HHHHH--hh--h-------hHHHHHHHHHHHHHHhhhhHH-HHHHHHhhcc------CCCchhHHHHHHHHHHHHH
Q 009914 85 ----TFLVA--FS--S-------TFAQVAISRALNGIGLALVAP-AIQSLVADST------DDSNRGVAFGWLQLTSNIG 142 (522)
Q Consensus 85 ----~~~~~--~~--~-------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~------~~~~r~~~~~~~~~~~~lg 142 (522)
+.+.. +. + ....+++.-.+.|.-.-.... ...+.-.||. +++.+.+.++.+.-.-.+.
T Consensus 82 v~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~c 161 (432)
T PF06963_consen 82 VAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFC 161 (432)
T ss_pred HHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHH
Confidence 22221 11 1 112222222233322222221 1122223332 3556788899999999999
Q ss_pred HHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccC-----CCCCCCCCCCCCc--c---------cccch
Q 009914 143 SLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFAN-----DPHFPDGGTANSD--Q---------VSSKS 206 (522)
Q Consensus 143 ~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~--~---------~~~~~ 206 (522)
-+++|++.|.+... .+.+....+.++..++..++=+++.. .|.-..++.+.+. . .....
T Consensus 162 kllaPl~vG~l~t~-----~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (432)
T PF06963_consen 162 KLLAPLFVGLLMTF-----ASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPS 236 (432)
T ss_pred HHHHHHHHHHHhhc-----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhh
Confidence 99999999999887 78888888888877777665544321 1211111110000 0 00111
Q ss_pred hh----hhhHHHHHHhhhhhcchhHHHHHHHhhhccchhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhh
Q 009914 207 FR----SDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRM 282 (522)
Q Consensus 207 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 282 (522)
.. +..+...+.++..++.+.+...+...+.+....+....+..|+...|+++...|.+-+...+.++.+.++..++
T Consensus 237 ~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l 316 (432)
T PF06963_consen 237 ILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWL 316 (432)
T ss_pred HHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 12233345566778888877766666665554444566788888889999999999999999999999999999
Q ss_pred hhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC---chhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchh
Q 009914 283 GDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDP---STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSR 359 (522)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 359 (522)
.+|+|..+. -...+..-..+....+..+..+..+ .....+.....+.=+|.-..-. ...-+++|.+|+++|
T Consensus 317 ~~riGlvr~-----G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL-~~~qi~Qe~V~~~~R 390 (432)
T PF06963_consen 317 MKRIGLVRA-----GLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDL-AVTQIMQENVPESER 390 (432)
T ss_pred HHHhcchhh-----HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhH-HHHHhhcccCCHHHh
Confidence 999997742 2222111111111222222222222 1222222233333344433334 567788999999999
Q ss_pred HHHHHHHHHHHHHHhchhhH
Q 009914 360 TSVYAMDRSFESILSSFAPP 379 (522)
Q Consensus 360 ~~~~g~~~~~~~~~~~i~~~ 379 (522)
|+..|+.+..+++...+.-.
T Consensus 391 g~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 391 GAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 99999999999977665543
No 133
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.53 E-value=1.5e-12 Score=126.97 Aligned_cols=167 Identities=12% Similarity=0.035 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFL 87 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~ 87 (522)
++...+..++............|.+.+++|.++.++|.+.+...++..+..++.+++.||+|+|+.+.++.+...+..++
T Consensus 207 ~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~ 286 (382)
T TIGR00902 207 NLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAI 286 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555555667777789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHH-HHHHHHHHHHHHHHHhhhcccccCCCCchH
Q 009914 88 VAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQ-LTSNIGSLVGGLFSVVMAPMTFMGIPGWRI 166 (522)
Q Consensus 88 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~ 166 (522)
++++++.+.+++.+++.|+..+...+....++.+. |+++|++..++++ ...++|.++|+.++|++.+. .|+ .
T Consensus 287 ~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~-----~g~-~ 359 (382)
T TIGR00902 287 IGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT-----LGA-G 359 (382)
T ss_pred HHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccH-H
Confidence 99999999999999999999999999999999998 8889999999986 57789999999999999988 786 6
Q ss_pred HHHHHHHHHHHHHHh
Q 009914 167 SFHIVGLISVVVGTL 181 (522)
Q Consensus 167 ~f~~~~~~~~i~~~~ 181 (522)
.|++.+++.++..++
T Consensus 360 ~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 360 TFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHH
Confidence 677777777655444
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.53 E-value=6.1e-13 Score=131.31 Aligned_cols=161 Identities=16% Similarity=0.181 Sum_probs=133.9
Q ss_pred HhhhhhhHHHHHHHhcCCChh----hhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHH
Q 009914 21 DESLLPGVYKEVGAALHTDPT----GLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQ 96 (522)
Q Consensus 21 ~~~~~~~~~~~~~~~~g~s~~----~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~ 96 (522)
......+..+.+..+.+.+.. ..+.+.++..++..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
T PRK09874 234 ATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQ 313 (408)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHH
Confidence 333444555655555433333 3456667778888899999999999999999999998888888877777788888
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHH
Q 009914 97 VAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISV 176 (522)
Q Consensus 97 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~ 176 (522)
+++.+++.|++.+...+...+++.+..|+++|++.+++......+|..+||.+++.+.+. .||+..|++.+++.+
T Consensus 314 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~-----~g~~~~f~~~~~~~l 388 (408)
T PRK09874 314 LGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN-----YGFRAVFLVTAGVVL 388 (408)
T ss_pred HHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh-----cchhHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999887 899999999999888
Q ss_pred HHHHhhhhcc
Q 009914 177 VVGTLVRLFA 186 (522)
Q Consensus 177 i~~~~~~~~~ 186 (522)
+..++.++..
T Consensus 389 ~~~~~~~~~~ 398 (408)
T PRK09874 389 FNAVYSWNSL 398 (408)
T ss_pred HHHHHHHHHH
Confidence 8777766544
No 135
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.53 E-value=4.4e-13 Score=130.75 Aligned_cols=161 Identities=19% Similarity=0.209 Sum_probs=132.9
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhh
Q 009914 14 AGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSST 93 (522)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~ 93 (522)
..+.............+.+.++++.++.+.+.+.+...++..++.++.|++.||+|||+.+.++.++.+++.++..+.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
T TIGR00890 213 SFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPM 292 (377)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHccc
Confidence 33333333333444456667889999999999999999999999999999999999999999998888888887777664
Q ss_pred H--HHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHH
Q 009914 94 F--AQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIV 171 (522)
Q Consensus 94 ~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~ 171 (522)
. ..+++..++.|++.+...+...+++.|.+|+++|++.+++.+....+|..++|.+.+.+.+. .||+..|++.
T Consensus 293 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~f~~~ 367 (377)
T TIGR00890 293 LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE-----IGFEYTFIVT 367 (377)
T ss_pred chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh-----hchhhHHHHH
Confidence 3 33445677888888888878888999999999999999999999999999999999999887 8999999998
Q ss_pred HHHHHHHH
Q 009914 172 GLISVVVG 179 (522)
Q Consensus 172 ~~~~~i~~ 179 (522)
+++.++..
T Consensus 368 ~~~~~~~~ 375 (377)
T TIGR00890 368 GAFALTSL 375 (377)
T ss_pred HHHHHHhc
Confidence 87766543
No 136
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.52 E-value=5e-11 Score=112.37 Aligned_cols=340 Identities=11% Similarity=0.057 Sum_probs=228.4
Q ss_pred hhhhhHHHHHHHh-cCCChhhhH-HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 009914 23 SLLPGVYKEVGAA-LHTDPTGLG-SLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAIS 100 (522)
Q Consensus 23 ~~~~~~~~~~~~~-~g~s~~~~g-~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (522)
-.-+.+.|++.+. .|++..|+. -+.-...-.+....++...+.|..+.|++++++.+...+...+..+.++...+-+.
T Consensus 21 PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~ 100 (412)
T PF01770_consen 21 PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLM 100 (412)
T ss_pred CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHH
Confidence 3456667777775 899988875 45555566677788899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHH
Q 009914 101 RALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGT 180 (522)
Q Consensus 101 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~ 180 (522)
.++.|++.+. ..+..+++-...|+++-.++.+...+..-+|..++.++|-.+... +..+++...++......+..+
T Consensus 101 q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~---~~~sy~~L~~isl~~~~~a~~ 176 (412)
T PF01770_consen 101 QFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF---GGVSYFQLNYISLASVSLALL 176 (412)
T ss_pred HHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHH
Confidence 9999998665 668889999999999999999999999999999999999988764 225667777776665566666
Q ss_pred hhhhccCCCCCC---CCC----------CCC-Cc-cc-----------ccchhhhhhHHHHHHhhhhhcchhHHHHHHHh
Q 009914 181 LVRLFANDPHFP---DGG----------TAN-SD-QV-----------SSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 234 (522)
Q Consensus 181 ~~~~~~~~~~~~---~~~----------~~~-~~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (522)
+.+++|..++.. +.. .+. ++ .+ .........+..+++.+...++|.++...+.-
T Consensus 177 ~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWW 256 (412)
T PF01770_consen 177 IALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWW 256 (412)
T ss_pred HHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 666666533211 100 000 00 00 00111122345667777888888877665554
Q ss_pred hhccch-hHHHHHHHHHHHHh---CCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHH
Q 009914 235 VTGSFP-WSALSFAAMWLELT---GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLA 310 (522)
Q Consensus 235 ~~~~~~-~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (522)
.+.... +...++.....++. +-.....|.+-+...+.+.++.+..|++..++.+.. .+.+...+.+.+..+.
T Consensus 257 a~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~----~l~l~~~S~l~a~~L~ 332 (412)
T PF01770_consen 257 AFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWG----ELALGVFSLLQAGLLF 332 (412)
T ss_pred HHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHH----HHHHHHHHHHHHHHHH
Confidence 444443 33445555444443 334455688888888888888899998855544431 1222222222222111
Q ss_pred HHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchh
Q 009914 311 ALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFA 377 (522)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~ 377 (522)
.. ....+.+...+..++++.......+ ....-++.....+.-|.+.|+.+++..+...+-
T Consensus 333 lm------~~t~~Iwv~Y~~yIif~~~y~fliT-iA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtil 392 (412)
T PF01770_consen 333 LM------SFTGNIWVCYAGYIIFRSLYMFLIT-IASFQIAKNLSEERYALVFGINTFVALVLQTIL 392 (412)
T ss_pred HH------HHhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccccceeeeeeeHHHHHHHHHHhe
Confidence 11 1234555566777777777776666 555666666667888899998887766555443
No 137
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.51 E-value=1.8e-12 Score=128.23 Aligned_cols=157 Identities=17% Similarity=0.118 Sum_probs=136.3
Q ss_pred hhhHHHHHHHh-cCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 009914 25 LPGVYKEVGAA-LHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRAL 103 (522)
Q Consensus 25 ~~~~~~~~~~~-~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 103 (522)
.....|.+.++ +|.++.+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.++.++
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLAL 321 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 44456666666 89999999999999999999999999999999888888888888888888888888888888888999
Q ss_pred HHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhh
Q 009914 104 NGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVR 183 (522)
Q Consensus 104 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~ 183 (522)
.|++.+...+...+++.+..|++.|++.+++......+|..+|+.+.+.+.+. .|++..+++.++..++..++..
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~~ 396 (417)
T PRK10489 322 FGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM-----MTPVASASASGFGLLIIGVLLL 396 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHH
Confidence 99998888888889999999999999999999999999999999999999987 8999999888877777666665
Q ss_pred hcc
Q 009914 184 LFA 186 (522)
Q Consensus 184 ~~~ 186 (522)
...
T Consensus 397 ~~~ 399 (417)
T PRK10489 397 LVL 399 (417)
T ss_pred Hhc
Confidence 543
No 138
>PRK03545 putative arabinose transporter; Provisional
Probab=99.51 E-value=3.4e-12 Score=125.04 Aligned_cols=158 Identities=14% Similarity=0.038 Sum_probs=128.2
Q ss_pred hhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHH
Q 009914 25 LPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT-FLVAFSSTFAQVAISRAL 103 (522)
Q Consensus 25 ~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~r~l 103 (522)
.....|.+.+.+|.|..+.+++.+...++..+++++.|++.||++||+.+. +..+..++. .+....++.+.+++..++
T Consensus 225 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l 303 (390)
T PRK03545 225 YSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIF 303 (390)
T ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 334445566678999999999999999999999999999999999887544 444333333 334456677888888999
Q ss_pred HHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhh
Q 009914 104 NGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVR 183 (522)
Q Consensus 104 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~ 183 (522)
.|++.+...+...+.+.+..| ++|++++++......+|..+||++++.+.+. .|++..|++.+++.++..+..+
T Consensus 304 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~-----~g~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 304 WGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH-----LGLSSIGYVGAALALAALVWSI 377 (390)
T ss_pred HHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cChhHHHHHHHHHHHHHHHHHH
Confidence 999988777778888888766 5789999999999999999999999999988 8999999999988888777776
Q ss_pred hccCCC
Q 009914 184 LFANDP 189 (522)
Q Consensus 184 ~~~~~~ 189 (522)
...+++
T Consensus 378 ~~~~~~ 383 (390)
T PRK03545 378 LIFRRF 383 (390)
T ss_pred HHcccc
Confidence 665443
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.50 E-value=3e-12 Score=124.89 Aligned_cols=155 Identities=15% Similarity=0.078 Sum_probs=127.7
Q ss_pred hhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 009914 23 SLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRA 102 (522)
Q Consensus 23 ~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 102 (522)
......+|.+.++.|.++.+.|++.+...++..+++++.|++.||+|+|+++..+..+.+++.+... + ........+
T Consensus 217 ~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~ 293 (381)
T PRK03633 217 GSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALF 293 (381)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHH
Confidence 3344456777778899999999999999999999999999999999999999888887777665443 2 233445677
Q ss_pred HHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhh
Q 009914 103 LNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLV 182 (522)
Q Consensus 103 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~ 182 (522)
+.|++.....|...+++.|..|+++++...+......++|..+||.+++++.+. .+|++.|++.+.+.++..+..
T Consensus 294 l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~-----~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 294 ILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN-----YSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCccHHHHHHHHHHHHHHHHH
Confidence 788877778899999999999888888888888889999999999999999988 899999999888877666555
Q ss_pred hhc
Q 009914 183 RLF 185 (522)
Q Consensus 183 ~~~ 185 (522)
++.
T Consensus 369 ~~~ 371 (381)
T PRK03633 369 LRK 371 (381)
T ss_pred Hhc
Confidence 543
No 140
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.49 E-value=4.3e-12 Score=123.76 Aligned_cols=149 Identities=15% Similarity=0.112 Sum_probs=126.9
Q ss_pred HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 009914 31 EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLAL 110 (522)
Q Consensus 31 ~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 110 (522)
.+.+++|.++.+.|++.+.......++.++.|++.||+|||+.+.++.++..+..+...+.++.+.+++.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44577899999999998888778888899999999999999998888777666666666677888888889999999998
Q ss_pred hHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhc
Q 009914 111 VAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLF 185 (522)
Q Consensus 111 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~ 185 (522)
..+....++.|..|+ ++++++++.+....+|..++|.+++.+.+. .||+..|++.+++.++..++..+.
T Consensus 305 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAER-----WSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccchhHHHHHHHHHHHHHHHHhee
Confidence 888888999998875 567999999999999999999999999887 799999999888877776665443
No 141
>PRK12382 putative transporter; Provisional
Probab=99.49 E-value=2.1e-12 Score=126.65 Aligned_cols=157 Identities=17% Similarity=0.090 Sum_probs=133.6
Q ss_pred hhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 009914 22 ESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISR 101 (522)
Q Consensus 22 ~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 101 (522)
........|.+.++.+.+. .++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (392)
T PRK12382 232 FAVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGA 309 (392)
T ss_pred HhHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 3344455555666666653 45666778888889999999999999999999999998888888888888888888899
Q ss_pred HHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHh
Q 009914 102 ALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTL 181 (522)
Q Consensus 102 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~ 181 (522)
++.|++.+...+...+.+.+.+|+++|++++++.+....+|..+||.+.+.+.+. .||+..|.+.+++.++..++
T Consensus 310 ~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-----~g~~~~~~~~~~~~~~~~~~ 384 (392)
T PRK12382 310 ALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS-----FGYPSVFLAGAISAVLGIIV 384 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHH
Confidence 9999999988888888999999999999999999999999999999999999988 89999999999888777766
Q ss_pred hhhc
Q 009914 182 VRLF 185 (522)
Q Consensus 182 ~~~~ 185 (522)
.++.
T Consensus 385 ~~~~ 388 (392)
T PRK12382 385 TILS 388 (392)
T ss_pred HHhh
Confidence 6554
No 142
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.49 E-value=1.9e-12 Score=129.80 Aligned_cols=178 Identities=12% Similarity=-0.032 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHH-HHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKE-VGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF 86 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~ 86 (522)
++.+++..++............|. +.+++|.|..+.++..+...++..++.+++|+++||+|||+.+.....+..++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 444555555555555555666674 5567999999999999999999999999999999999999877665444443332
Q ss_pred H--HHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHH-HHHHHHHHHHhhhcc-c-----
Q 009914 87 L--VAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNI-GSLVGGLFSVVMAPM-T----- 157 (522)
Q Consensus 87 ~--~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~l-g~~~g~~l~~~l~~~-~----- 157 (522)
+ ....++...+.+.+++.|++.............|.+|++.|+.+.|+.+....+ |..++|.+.|.+.+. .
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 2 223346666667788888654333333346677999999999999999999886 779999999999881 0
Q ss_pred -ccCCCCchHHHHHHHHHHHHHHHhhhhc
Q 009914 158 -FMGIPGWRISFHIVGLISVVVGTLVRLF 185 (522)
Q Consensus 158 -~~~~~gw~~~f~~~~~~~~i~~~~~~~~ 185 (522)
.....+|+..|++.++..++..+..+++
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 0012689999999877777765555543
No 143
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.45 E-value=3.6e-12 Score=128.61 Aligned_cols=178 Identities=13% Similarity=0.044 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH
Q 009914 7 TLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~ 86 (522)
.+....+..+.............|.+.+++|.+..+.++......++..++.+++|+++||+|||+.+..+.++.+++.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 364 (481)
T TIGR00879 285 LFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLF 364 (481)
T ss_pred HHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 34444444444444455566777888899999998889999999999999999999999999999999988888877777
Q ss_pred HHHhh-----h------hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009914 87 LVAFS-----S------TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP 155 (522)
Q Consensus 87 ~~~~~-----~------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~ 155 (522)
+.++. + +...+....++.+.......+....++.|.+|+++|++++++......+|.++++.+.+.+.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 365 VLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred HHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66521 1 222233333333332233345666778999999999999999999999999999999999988
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHhhhhccCCC
Q 009914 156 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDP 189 (522)
Q Consensus 156 ~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 189 (522)
. .+|++.|++.++++++..++.+++.+++
T Consensus 445 ~-----~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 445 S-----IGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred h-----cCccceehhHHHHHHHHHHHHheecccC
Confidence 7 7999999999988888877776655443
No 144
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.45 E-value=1.4e-11 Score=120.99 Aligned_cols=170 Identities=15% Similarity=0.109 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHH-HHHHHHHHHHHH
Q 009914 9 VLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIA-LGAFLWAAATFL 87 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~-~~~~~~~~~~~~ 87 (522)
....+..++............|.+.+++|.+..+.+.+.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~ 304 (402)
T TIGR00897 225 LLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLA 304 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Confidence 3444445555555555666778888889999999999999999999999999999999999888754 333333333333
Q ss_pred HHh-----hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 88 VAF-----SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 88 ~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
+.+ .++.+.+++..++.|++.+...+ ....+.+.. +++|++++|+.+....+|..++|.+++.+.+. .
T Consensus 305 l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~-----~ 377 (402)
T TIGR00897 305 LYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF-----F 377 (402)
T ss_pred HHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----c
Confidence 322 23566777788888988777654 445666754 56899999999999999999999999999988 8
Q ss_pred CchHHHHHHHHHHHHHHHhhhhc
Q 009914 163 GWRISFHIVGLISVVVGTLVRLF 185 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~ 185 (522)
||+.+|++.+++.++..++..++
T Consensus 378 g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 378 GAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred chHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998887777766553
No 145
>PRK03699 putative transporter; Provisional
Probab=99.45 E-value=6.2e-12 Score=123.24 Aligned_cols=173 Identities=10% Similarity=0.058 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHH-HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVG-AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF 86 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~ 86 (522)
+..+.+..++.......+....|.+. +++|.+..+.+.+.+.+.++..++.++.|+++||+++|+.+.....+.++...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~ 286 (394)
T PRK03699 207 VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMY 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Confidence 34445555555555555556667655 67899999999999999999999999999999999999998888777777766
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchH
Q 009914 87 LVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRI 166 (522)
Q Consensus 87 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~ 166 (522)
+....++.+.+.+..++.|++.+...+...++..+..| +++++..+.......+|..++|.+.+.+.+. .||+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~-----~g~~~ 360 (394)
T PRK03699 287 LFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAH-----FGLQA 360 (394)
T ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH-----hCchh
Confidence 66667777777778888999888888888888888765 4467888999999999999999999999987 89999
Q ss_pred HHHHHHHHHHHHHHhhhhcc
Q 009914 167 SFHIVGLISVVVGTLVRLFA 186 (522)
Q Consensus 167 ~f~~~~~~~~i~~~~~~~~~ 186 (522)
.+++.+++.++..+.....+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 361 ALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred hhhhhHHHHHHHHHHHHHHH
Confidence 99988888777766555544
No 146
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.45 E-value=2.3e-12 Score=128.37 Aligned_cols=169 Identities=12% Similarity=0.095 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH--hchhHHHH--HHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR--HNRAHVIA--LGAFLWAA 83 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr--~grr~~l~--~~~~~~~~ 83 (522)
+....+..++...........+|.+.+++|.+..+.+++.++..++..+++++.|++.|| +++|+... .+.++.++
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l 322 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGL 322 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHH
Confidence 334444455555555555566677778899999999999999999999999999999997 34444333 33444445
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC-
Q 009914 84 ATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP- 162 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~- 162 (522)
+.+++.+.++++.+++.+++.|++.+...+...+++.|.+|++++++.+++.+...++|.++||.+++.+.+. .
T Consensus 323 ~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~-----~g 397 (455)
T TIGR00892 323 THLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA-----TK 397 (455)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh-----cC
Confidence 5556667788898999999999999999999999999999999999999999999999999999999999876 4
Q ss_pred CchHHHHHHHHHHHHHHHh
Q 009914 163 GWRISFHIVGLISVVVGTL 181 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~ 181 (522)
+|+..|++.+++.++..+.
T Consensus 398 ~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 398 NYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred CcchHHHHhhHHHHHHHHH
Confidence 5999999988876665543
No 147
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.43 E-value=7.7e-12 Score=126.79 Aligned_cols=148 Identities=9% Similarity=0.096 Sum_probs=116.0
Q ss_pred hhhHHHHHH-HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHH
Q 009914 25 LPGVYKEVG-AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS--STFAQVAISR 101 (522)
Q Consensus 25 ~~~~~~~~~-~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r 101 (522)
....+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+++..+..+..+..++.... .+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 345667666 5899999999999999999999999999999999999999888877666665544333 3334444445
Q ss_pred HHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHH
Q 009914 102 ALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVV 177 (522)
Q Consensus 102 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i 177 (522)
++.+.......+...+++.+.+|+++|++.+++......+|..+||.+++.+.+. .||+..+...+....+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~-----~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR-----LDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc-----CChHHHHHHHHHHHHH
Confidence 5544443344566678899999999999999999999999999999999999987 8999888665544433
No 148
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.42 E-value=2.4e-11 Score=118.91 Aligned_cols=173 Identities=15% Similarity=0.099 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 009914 10 LVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVA 89 (522)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~ 89 (522)
.+.+..++............|.+.+++|.+..+.|.+.+.+.++..++.++.|++.||+|||+.+..+..+..++.++..
T Consensus 209 ~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~ 288 (393)
T PRK09705 209 TLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFI 288 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Confidence 33344444444555555666777777999999999999999999999999999999999999998888877777766554
Q ss_pred hhh-hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccC-CCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHH
Q 009914 90 FSS-TFAQVAISRALNGIGLALVAPAIQSLVADSTD-DSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRIS 167 (522)
Q Consensus 90 ~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~ 167 (522)
..+ +...+ .-++.|++.+...+.......+..+ ++++++.+++.+....++..++|.+.+++.+.. .+|...
T Consensus 289 ~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~----g~~~~~ 362 (393)
T PRK09705 289 WLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS----GNYLMD 362 (393)
T ss_pred HccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCchHH
Confidence 433 22222 2345688888888877777777775 567899999999999999999999999999872 248888
Q ss_pred HHHHHHHHHHHHHhhhhccCC
Q 009914 168 FHIVGLISVVVGTLVRLFAND 188 (522)
Q Consensus 168 f~~~~~~~~i~~~~~~~~~~~ 188 (522)
|++.++..++..+....+.++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 363 WAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred HHHHHHHHHHHHHHHHHhccc
Confidence 888877777766665555433
No 149
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.42 E-value=3.7e-11 Score=117.23 Aligned_cols=164 Identities=12% Similarity=0.036 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHh
Q 009914 11 VNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAF 90 (522)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~ 90 (522)
+.+..++............|.+.++.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.++.+.
T Consensus 210 ~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~ 289 (382)
T PRK11128 210 FLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGS 289 (382)
T ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh
Confidence 33334433333333444556666789999999999999999999999999999999999999999999999998888888
Q ss_pred hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHH-HHHHHHHHHHHHHHHhhhcccccCCCCchHHHH
Q 009914 91 SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQ-LTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFH 169 (522)
Q Consensus 91 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~ 169 (522)
.++.+.+++..++.|++.+...+....++.+. +++++++..+... ....+|..+||.++|.+.+. .|+ ..|+
T Consensus 290 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~-----~g~-~~~~ 362 (382)
T PRK11128 290 TTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH-----LGA-GVFW 362 (382)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccH-HHHH
Confidence 89999999999999999999999999998886 5666788888876 55678889999999999987 777 4676
Q ss_pred HHHHHHHHHHHh
Q 009914 170 IVGLISVVVGTL 181 (522)
Q Consensus 170 ~~~~~~~i~~~~ 181 (522)
..+++.++..++
T Consensus 363 ~~~~~~~~~~~~ 374 (382)
T PRK11128 363 VMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHH
Confidence 666665554443
No 150
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.41 E-value=9.2e-10 Score=105.69 Aligned_cols=359 Identities=13% Similarity=0.094 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHhcCCC-----hhhhHHH-HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH
Q 009914 9 VLVNLAGIMERADESLLPGVYKEVGAALHTD-----PTGLGSL-TLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA 82 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s-----~~~~g~~-~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~ 82 (522)
..+.++..........-..+...+.+..+.. ....|.. .++-.....+..++.+.+.|+.|.|..+.++...+.
T Consensus 12 ~~lg~g~~~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~ 91 (461)
T KOG3098|consen 12 LMLGFGFLFLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYA 91 (461)
T ss_pred eehhhhHHHHhHhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHH
Confidence 3444555555554444455555444433221 1223443 677778888999999999999999999999999888
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccc---c
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTF---M 159 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~---~ 159 (522)
.-.+.+.+ +|-+.+++...+.|+|.+..+..--.++++..+++++.+..++..+....+.++|..+-..+..... .
T Consensus 92 ~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~ 170 (461)
T KOG3098|consen 92 AFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAI 170 (461)
T ss_pred HHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccc
Confidence 77666544 5677888999999999999999999999999999999999999999999999999776655543321 0
Q ss_pred CCCCch--------H---HHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHH
Q 009914 160 GIPGWR--------I---SFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQ 228 (522)
Q Consensus 160 ~~~gw~--------~---~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (522)
...+.+ . ...+.+++..+..+...-....|.......+ +.. + ....+.++..-+.++++...
T Consensus 171 ~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~~~~~~---~~~-~---~~~~~~l~~~~~l~~~~~ml 243 (461)
T KOG3098|consen 171 ITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKDVVNCK---SSS-E---TSFSELLKLTFKLLKTPKML 243 (461)
T ss_pred cccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccchhhhh---hhc-c---ccHHHHHHHHHHHhcCHhHH
Confidence 011111 0 1111111111111111111111211110000 000 0 22344555555566666666
Q ss_pred HHHHHhhhccchhH-HHHHHHHHHH---HhCCCh-hHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHH
Q 009914 229 IIVAQGVTGSFPWS-ALSFAAMWLE---LTGFSH-EKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISS 303 (522)
Q Consensus 229 ~~~~~~~~~~~~~~-~~~~~~~~~~---~~g~~~-~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 303 (522)
.+...++....... .....|..+. ..+.+. ...+......+++.+++....+.+.+|.++.... ..+.. ..
T Consensus 244 ~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~--~~~~~--~~ 319 (461)
T KOG3098|consen 244 LLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK--PTVLI--GI 319 (461)
T ss_pred HHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC--cchhH--HH
Confidence 55554444433222 2223444332 333333 3345555567778888888888888776554321 12221 11
Q ss_pred HHHHHHHHHHHHhCCCCC-------------chhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHH
Q 009914 304 LSAIPLAALLLLVLPDDP-------------STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFE 370 (522)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 370 (522)
.+-.....+..+..+... +...+..++.++.|++.+.... ..+.++....| ++|.++.++..+-.
T Consensus 320 ~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t-~~~~ii~~~~~-~~~~~~fsi~kfyq 397 (461)
T KOG3098|consen 320 IIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNT-QRYVIIALLYP-DDRAQAFSLFKFYQ 397 (461)
T ss_pred HHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHH-HHHHHHHHHhc-CchHHHHHHHHHHH
Confidence 121212222222222211 1234577788899999998888 88888888884 77888888888777
Q ss_pred HHHhchhhHHH
Q 009914 371 SILSSFAPPVV 381 (522)
Q Consensus 371 ~~~~~i~~~~~ 381 (522)
.+...++-...
T Consensus 398 ~~~s~v~~f~~ 408 (461)
T KOG3098|consen 398 SVASCVAFFFS 408 (461)
T ss_pred HHHHHHHhhhh
Confidence 76666554443
No 151
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.41 E-value=1.1e-11 Score=121.57 Aligned_cols=164 Identities=14% Similarity=0.064 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHH-HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH-
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVG-AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT- 85 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~- 85 (522)
+.......+.............|.+. +++|.+..+.+.+.+...++..++.++.|+++||+|||+.+.....+..+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 300 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAV 300 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 44444455555555555556666655 7789999999999999999999999999999999999998775544443332
Q ss_pred H-HHHh--hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHH-HHHHHHHHHHHHHHHHhhhcccccCC
Q 009914 86 F-LVAF--SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWL-QLTSNIGSLVGGLFSVVMAPMTFMGI 161 (522)
Q Consensus 86 ~-~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~lg~~~g~~l~~~l~~~~~~~~ 161 (522)
. ...+ .++.+.+++..++.|++.+...+...+++.|.+|+++|++++++. .....+|..++|.+++.+.+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~----- 375 (394)
T TIGR00883 301 PLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM----- 375 (394)
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH-----
Confidence 2 2222 246677777888899998899999999999999999999999984 566678999999999999987
Q ss_pred CC-chHHHHHHHHHHH
Q 009914 162 PG-WRISFHIVGLISV 176 (522)
Q Consensus 162 ~g-w~~~f~~~~~~~~ 176 (522)
.| |+..++...+..+
T Consensus 376 ~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 376 TGDWYAIGYYLAALAL 391 (394)
T ss_pred cCcchhHHHHHHHHHH
Confidence 66 8887777665443
No 152
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.40 E-value=1.7e-10 Score=115.80 Aligned_cols=156 Identities=11% Similarity=0.057 Sum_probs=123.3
Q ss_pred hHHHHHHHhcCCChhhhHHHHH-HHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHH
Q 009914 27 GVYKEVGAALHTDPTGLGSLTL-FRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLV---AFS-STFAQVAISR 101 (522)
Q Consensus 27 ~~~~~~~~~~g~s~~~~g~~~s-~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r 101 (522)
...|.+.+++|.+..+.|++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.+.+ +.. ++.+.+.+..
T Consensus 244 ~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~ 323 (491)
T PRK11010 244 LTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV 323 (491)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 3445556789999999999974 6668999999999999999999988776665555443332 232 3555555566
Q ss_pred HHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHh
Q 009914 102 ALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTL 181 (522)
Q Consensus 102 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~ 181 (522)
++..++.+...+...++..+..+++.+++.+++.+...++|..+++.+.|.+.+. .||+..|.+.++++++..++
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~-----~G~~~~f~~~~~~~l~~l~~ 398 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA-----HGWPTFYLFSVAAAVPGLLL 398 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHHHHHHHHHHHHHHHHH
Confidence 6766666766777788999999999999999999999999999998999999987 89999999998888887777
Q ss_pred hhhccC
Q 009914 182 VRLFAN 187 (522)
Q Consensus 182 ~~~~~~ 187 (522)
..+..+
T Consensus 399 ~~~~~~ 404 (491)
T PRK11010 399 LLVCRQ 404 (491)
T ss_pred HHHHHh
Confidence 766543
No 153
>PRK10504 putative transporter; Provisional
Probab=99.39 E-value=3.7e-11 Score=120.87 Aligned_cols=148 Identities=12% Similarity=0.092 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHH-hcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 009914 9 VLVNLAGIMERADESLLPGVYKEVGA-ALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFL 87 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~ 87 (522)
.......++............|.+.+ .+|.++.+.+++.....++..++.++.|++.||+|||+++..+..+.+++.++
T Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~ 343 (471)
T PRK10504 264 SLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLL 343 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 33444455555555566667777665 58999999999999999999989999999999999999999988888877666
Q ss_pred HHhh---hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 88 VAFS---STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 88 ~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
..+. ++.+.+.+..++.|++.+...+....++.+..|+++++.++++.+....+|..+|+.+++.+.+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 344 FMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6553 33444455677888999988999999999999999999999999999999999999999988765
No 154
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.39 E-value=3.8e-12 Score=117.75 Aligned_cols=131 Identities=18% Similarity=0.263 Sum_probs=105.1
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHH
Q 009914 247 AAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVM 326 (522)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (522)
.|...++.++|..+.|.+.+...+..-++.++.|.++||.+.|+- +... .++ ..+..+.+.. .++.++
T Consensus 52 ~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~f-----m~~g-Lil-----sai~nil~Gf-s~s~~~ 119 (448)
T COG2271 52 MPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYF-----MAFG-LIL-----SAIVNILFGF-SPSLFL 119 (448)
T ss_pred cHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcee-----ehHH-HHH-----HHHHHHHHhh-hhHHHH
Confidence 567777888999999999999999999999999999999998852 1111 111 1111111111 236667
Q ss_pred HHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHH--HHHHHHhhCc
Q 009914 327 HGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV--GILAQHVYGF 391 (522)
Q Consensus 327 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~--g~l~~~~~g~ 391 (522)
+.++..+-|.+.+...| .+...+...+|+++||+..|+.|+..++|+++.|++. +++.++ +++
T Consensus 120 ~~~l~~lng~fQg~Gwp-p~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~-~~w 184 (448)
T COG2271 120 FAVLWVLNGWFQGMGWP-PCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH-GGW 184 (448)
T ss_pred HHHHHHHHHHHhcCCCc-HHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc-cch
Confidence 88889999999999999 8899999999999999999999999999999999999 888777 455
No 155
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.39 E-value=5.7e-11 Score=111.50 Aligned_cols=176 Identities=14% Similarity=0.054 Sum_probs=145.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
++.+...+....+.....+..+.++-|.+.+..|.|.+.++++..++.++..++..++|++.|| +.|+.+.....+.++
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~ 288 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLAL 288 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHH
Confidence 3444455555555555566778889999999999999999999999999999999999999999 889988888777777
Q ss_pred HHHHHHhhh-hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 84 ATFLVAFSS-TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 84 ~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
..+.+.+.+ +.+..++.-++.|+..+.........+++ ..++.+..+.++.....++|..+|..++|.+.++ .
T Consensus 289 ~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-----~ 362 (394)
T COG2814 289 ALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA-----L 362 (394)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----h
Confidence 777666654 55566677777888877777777777777 4467789999999999999999999999999998 9
Q ss_pred CchHHHHHHHHHHHHHHHhhhhcc
Q 009914 163 GWRISFHIVGLISVVVGTLVRLFA 186 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~~ 186 (522)
|+....++.+++.++..++.+...
T Consensus 363 g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 363 GYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998888877776644
No 156
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.39 E-value=5e-11 Score=118.83 Aligned_cols=160 Identities=21% Similarity=0.198 Sum_probs=142.0
Q ss_pred HHhhhhhhHHHHHH-HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 009914 20 ADESLLPGVYKEVG-AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVA 98 (522)
Q Consensus 20 ~~~~~~~~~~~~~~-~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 98 (522)
+.......++|.+. +.+|.++...|++.++..+|..+++++.+++.+|+++++++..+.++.+++.+.++++++.+..+
T Consensus 232 l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~ 311 (524)
T PF05977_consen 232 LFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLAL 311 (524)
T ss_pred HhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHH
Confidence 33334445677665 56899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHH
Q 009914 99 ISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVV 178 (522)
Q Consensus 99 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~ 178 (522)
+..++.|++.....+...+.+.+..|++.|||.++++.+....+..+|.++.|.+.+. .|.+..+.+.++..++.
T Consensus 312 ~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~-----~g~~~al~~a~~~lll~ 386 (524)
T PF05977_consen 312 IALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH-----FGVRTALLIAGAALLLS 386 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998 89999998888766666
Q ss_pred HHhhhh
Q 009914 179 GTLVRL 184 (522)
Q Consensus 179 ~~~~~~ 184 (522)
.++...
T Consensus 387 ~~~~~~ 392 (524)
T PF05977_consen 387 ALIALR 392 (524)
T ss_pred HHHHHH
Confidence 555544
No 157
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.37 E-value=9.6e-11 Score=115.57 Aligned_cols=178 Identities=16% Similarity=0.131 Sum_probs=144.6
Q ss_pred hHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchh--HHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESL-LPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRA--HVIALGAFLW 81 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr--~~l~~~~~~~ 81 (522)
.+.+....+++++..-+.+. ......+..+++|++..+...+..+..+...++++++|++.||+|.| ++++++++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 34555566666554444433 44444555669999999999999999999999999999999999998 8888888777
Q ss_pred HHHHHHHHh--------hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 82 AAATFLVAF--------SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 82 ~~~~~~~~~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
.+..+.-.+ ..+.+.+.+.-++.|+..|..++...++.++..|+++.+..+|++....-....+||++.+.+
T Consensus 360 ~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i 439 (477)
T PF11700_consen 360 IIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLI 439 (477)
T ss_pred HHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555544444 567788999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCCchHHHHHHHHHHHHHHHhhhhcc
Q 009914 154 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFA 186 (522)
Q Consensus 154 ~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 186 (522)
.+.. .+-|+.+....++.++..++.++..
T Consensus 440 ~~~t----g~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 440 TDAT----GSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHh----CCchhHHHHHHHHHHHHHHHHhhcc
Confidence 8873 3478888888777776666665544
No 158
>PRK09952 shikimate transporter; Provisional
Probab=99.36 E-value=1.5e-10 Score=114.86 Aligned_cols=161 Identities=17% Similarity=0.100 Sum_probs=117.5
Q ss_pred hhhhhHHH-HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHh---h-hhHHHH
Q 009914 23 SLLPGVYK-EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAF---S-STFAQV 97 (522)
Q Consensus 23 ~~~~~~~~-~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~---~-~~~~~l 97 (522)
.......| ++.+++|.+......+.....+...++.++.|+++||+|||+++..+.++.+++.+.+.. . ++.+.+
T Consensus 267 ~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (438)
T PRK09952 267 YIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIV 346 (438)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHH
Confidence 33333444 455678988877666666667777888999999999999999988887766555443322 1 234444
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHH-HHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHH
Q 009914 98 AISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLT-SNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISV 176 (522)
Q Consensus 98 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~ 176 (522)
++..++.+++.+...+...+++.|.+|.+.|+...++.... ..+|..++|.+.+++.+.. ..+|+.++...++..+
T Consensus 347 ~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~---~~~~~~~~~~~~~~~~ 423 (438)
T PRK09952 347 FFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF---GGSWHSVAIYLLAGCL 423 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHH
Confidence 55667778888888888899999999999999888886544 4589999999999997641 0358888888877777
Q ss_pred HHHHhhhhcc
Q 009914 177 VVGTLVRLFA 186 (522)
Q Consensus 177 i~~~~~~~~~ 186 (522)
+..+..+..+
T Consensus 424 i~~v~~~~~~ 433 (438)
T PRK09952 424 ISAMTALLMK 433 (438)
T ss_pred HHHHHHHHcc
Confidence 7766665543
No 159
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.36 E-value=5.7e-11 Score=116.62 Aligned_cols=172 Identities=13% Similarity=0.118 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHH-HHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHH--HHH------H
Q 009914 7 TLVLVNLAGIMERADESLLPGVYKEV-GAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHV--IAL------G 77 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~--l~~------~ 77 (522)
.+....+..+.............|.+ .+++|.++.+.+++.+...++..++.++.|++.||++||+. ... +
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
T TIGR00893 216 RVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIA 295 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Confidence 34455555666666656666666655 46689999999999999999999999999999999999961 111 1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009914 78 AFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT 157 (522)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~ 157 (522)
.++..+........++.+..+...++.+.+.+ ..+...+++.|.+|+++|++.+++.+....+|..++|.+.+.+.+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~- 373 (399)
T TIGR00893 296 GLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT- 373 (399)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC-
Confidence 11111111111112234444444444444444 7888999999999999999999999999999999999999999887
Q ss_pred ccCCCC-chHHHHHHHHHHHHHHHhhhh
Q 009914 158 FMGIPG-WRISFHIVGLISVVVGTLVRL 184 (522)
Q Consensus 158 ~~~~~g-w~~~f~~~~~~~~i~~~~~~~ 184 (522)
.| |+..|++.++..++..+..++
T Consensus 374 ----~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 374 ----TGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHH
Confidence 67 999999988877776665543
No 160
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=4.8e-11 Score=117.64 Aligned_cols=137 Identities=10% Similarity=0.141 Sum_probs=113.5
Q ss_pred HHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHHHh
Q 009914 30 KEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF-LVAFSSTFAQVAISRALNGIGL 108 (522)
Q Consensus 30 ~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~ 108 (522)
+.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++..+..+ +....++.+.+.+..++.|+..
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLV 342 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 345567899999999999999999999999999999999999998887766533332 3334456666777777777777
Q ss_pred hhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC-chHHHHHH
Q 009914 109 ALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG-WRISFHIV 171 (522)
Q Consensus 109 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g-w~~~f~~~ 171 (522)
+...+...+++.|.+|+++|++++|+.+....+|..++|++.+.+.+. .| |+..+...
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-----~g~~~~~~~~~ 401 (405)
T TIGR00891 343 QGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR-----LDEYGTALASL 401 (405)
T ss_pred ccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh-----ccccchhHHhh
Confidence 777778889999999999999999999999999999999999999987 66 77766553
No 161
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.34 E-value=9.5e-11 Score=116.32 Aligned_cols=175 Identities=12% Similarity=0.027 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHH-HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHh--chhHHH-HHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVG-AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRH--NRAHVI-ALGAFLWAA 83 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~--grr~~l-~~~~~~~~~ 83 (522)
++.+.++.+........+...+|.+. +++|.+..+.+...+...++..++.++.|+++||+ ++|+.. ....+...+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~ 324 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILL 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHH
Confidence 34444445555554445555666555 67899999999999999999999999999999998 333322 221111111
Q ss_pred HHHHHH--hhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 009914 84 ATFLVA--FSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGI 161 (522)
Q Consensus 84 ~~~~~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~ 161 (522)
...... ...+...+.+..+..|++...........+.|.+|+++|++.+|+.+....+|..++|.+.+++.+.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~----- 399 (434)
T PRK11663 325 SVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI----- 399 (434)
T ss_pred HHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh-----
Confidence 111111 1223333333444444433222223345678889999999999999999999999999999999987
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhccC
Q 009914 162 PGWRISFHIVGLISVVVGTLVRLFAN 187 (522)
Q Consensus 162 ~gw~~~f~~~~~~~~i~~~~~~~~~~ 187 (522)
.||+..|++.+++.++..+..+...+
T Consensus 400 ~g~~~~f~~~~~~~~~~~~~~~~~~~ 425 (434)
T PRK11663 400 WHWTGFFVVISIAAGISALLLLPFLN 425 (434)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999988887776665543
No 162
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.34 E-value=9.7e-11 Score=116.92 Aligned_cols=174 Identities=10% Similarity=-0.001 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHH-hcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHh--chhHHH-HHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGA-ALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRH--NRAHVI-ALGAFLWAA 83 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~--grr~~l-~~~~~~~~~ 83 (522)
++...+..++...........+|.+.+ +.|.+..+.+++...+.++..++.+++|+++||+ +||+.. .....+..+
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~ 334 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI 334 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHH
Confidence 344445554444444555566776655 4799999999999999999999999999999999 555432 222233333
Q ss_pred HHHHHHhh--hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHH-HHHHHHHhhhcccccC
Q 009914 84 ATFLVAFS--STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSL-VGGLFSVVMAPMTFMG 160 (522)
Q Consensus 84 ~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~-~g~~l~~~l~~~~~~~ 160 (522)
+.++..+. .+.+...+..++.|.+..........++.|.+|+++|++++|+.+....+|.. ++|.+.+.+.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~---- 410 (452)
T PRK11273 335 ATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---- 410 (452)
T ss_pred HHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH----
Confidence 33333222 24444444555555543333333445677999999999999999988888765 579999999988
Q ss_pred CCCchHHHHHHHHHHHHHHHhhhhcc
Q 009914 161 IPGWRISFHIVGLISVVVGTLVRLFA 186 (522)
Q Consensus 161 ~~gw~~~f~~~~~~~~i~~~~~~~~~ 186 (522)
.||+..|++.++.+++..+....+.
T Consensus 411 -~g~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 411 -FGWDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred -hcchHHHHHHHHHHHHHHHHHHHHh
Confidence 7999999998887777766665544
No 163
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.33 E-value=1.6e-10 Score=116.70 Aligned_cols=166 Identities=14% Similarity=0.085 Sum_probs=123.1
Q ss_pred hhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhh--hH--HHHHH
Q 009914 24 LLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSS--TF--AQVAI 99 (522)
Q Consensus 24 ~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~--~~--~~l~~ 99 (522)
......|.+.++.|.+....++......+...++.++.|+++||+|||++++.+.++.+++.++++... +. .....
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 344556888888999888777777788888999999999999999999999999999888877765432 11 12223
Q ss_pred HHHHHHHHhhh-hHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-cccCCCCchHHHHHHHHHHHH
Q 009914 100 SRALNGIGLAL-VAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM-TFMGIPGWRISFHIVGLISVV 177 (522)
Q Consensus 100 ~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~-~~~~~~gw~~~f~~~~~~~~i 177 (522)
+.++.+.+.+. ..+....++.|.+|+++|++++++......+|.++++.+.+.+.+. ...+..+|+..|++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVL 448 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHH
Confidence 34444444443 2366789999999999999999999999999999887666544410 001127899999998888887
Q ss_pred HHHhhhhccCCC
Q 009914 178 VGTLVRLFANDP 189 (522)
Q Consensus 178 ~~~~~~~~~~~~ 189 (522)
..++.+++.+|+
T Consensus 449 ~~~~~~~~~~e~ 460 (479)
T PRK10077 449 AALFMWKFVPET 460 (479)
T ss_pred HHHHHHhccccC
Confidence 777776665443
No 164
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.33 E-value=1.8e-10 Score=112.91 Aligned_cols=152 Identities=16% Similarity=0.076 Sum_probs=116.8
Q ss_pred hhhHHHHHHHhcCCChhhhHHHHHHHHH-HHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHh------hhhHHHH
Q 009914 25 LPGVYKEVGAALHTDPTGLGSLTLFRSI-VQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAF------SSTFAQV 97 (522)
Q Consensus 25 ~~~~~~~~~~~~g~s~~~~g~~~s~~~~-~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~------~~~~~~l 97 (522)
.....+.+.++.|.+++++|++...... ...++.++.|++.||+|+|+.+..+..+.++..+.... .++...+
T Consensus 227 ~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (390)
T TIGR02718 227 GFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVA 306 (390)
T ss_pred HHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHH
Confidence 3334556666789999999999888764 66677889999999999999988877665333332221 1233444
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhccCC-CchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHH
Q 009914 98 AISRALNGIGLALVAPAIQSLVADSTDD-SNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISV 176 (522)
Q Consensus 98 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~ 176 (522)
+...++.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+. .||+..|++.+++.+
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~-----~G~~~~f~~~~~~~l 381 (390)
T TIGR02718 307 WSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR-----FGYAGGFLSGTVLAV 381 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HccHHHHHHHHHHHH
Confidence 5555666777788888888888888776 7889999999999999999999999999988 799999998887766
Q ss_pred HHHHh
Q 009914 177 VVGTL 181 (522)
Q Consensus 177 i~~~~ 181 (522)
+..++
T Consensus 382 ~a~~~ 386 (390)
T TIGR02718 382 LAILL 386 (390)
T ss_pred HHHHH
Confidence 65544
No 165
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.32 E-value=1.4e-10 Score=115.08 Aligned_cols=140 Identities=11% Similarity=0.029 Sum_probs=105.9
Q ss_pred hhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 009914 25 LPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALN 104 (522)
Q Consensus 25 ~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 104 (522)
....+|.+.++.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.++.++..+.....++.....+.-++.
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 44566777777899999999999999999999999999999999999998888877766655444333222222222333
Q ss_pred HH--HhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHH
Q 009914 105 GI--GLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFH 169 (522)
Q Consensus 105 G~--~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~ 169 (522)
|+ +.....+....++.|.+|+++|++++|+......+|..++|.+.+++.+. .|+....+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~-----~g~~~~~~ 391 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT-----MGLGAALT 391 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc-----ccHHHHHH
Confidence 33 22233445567889999999999999999999999999999999999887 67655433
No 166
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.31 E-value=1e-10 Score=113.47 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=118.0
Q ss_pred hHHHHHHHh-cCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHH
Q 009914 27 GVYKEVGAA-LHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSST-FAQVAISRALN 104 (522)
Q Consensus 27 ~~~~~~~~~-~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~ 104 (522)
...|.+.++ +|.++.+.+++.+...++..++.++.+++.||++||+.+..+..+.+++.++..+.++ ++.+++..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 566776665 8999999999999999999999999999999999999998888888888887777774 88888899999
Q ss_pred HHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 105 GIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 105 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
|++.+...+...+++.|..|+++|++.+++.+....+|..+++.+++.+.+.
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998765
No 167
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.30 E-value=7.1e-11 Score=117.45 Aligned_cols=136 Identities=19% Similarity=0.229 Sum_probs=96.3
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhH
Q 009914 246 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 325 (522)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (522)
..| ++++.|.++.+.++..+...++..++.++.|+++||+++|+. +.... .+.++ ..+.....+....+..
T Consensus 49 ~~p-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~-----~~~~~-~~~~~--~~~~~~~~~~~~~~~~ 119 (438)
T TIGR00712 49 AMP-YLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVF-----LPAGL-ILSAA--VMLLMGFVPWATSSIA 119 (438)
T ss_pred hhH-HHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCcee-----hHHHH-HHHHH--HHHHHhccccccchHH
Confidence 345 444569999999999999999999999999999999998852 22211 11111 1111111111122334
Q ss_pred HHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 326 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 326 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
.+.+..++.|++.+...+ .....+.|.+|+++|++++|+.+....+++.++|++.+...+...+|
T Consensus 120 ~l~~~~~l~g~~~g~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w 184 (438)
T TIGR00712 120 IMFVLLFLNGWFQGMGWP-PCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDW 184 (438)
T ss_pred HHHHHHHHHHHHhhcchH-HHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhh
Confidence 445566777888887776 67788889999999999999999999999999999888766543455
No 168
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.29 E-value=3.2e-10 Score=100.69 Aligned_cols=150 Identities=14% Similarity=0.026 Sum_probs=124.6
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
||..+..........+ ..+.++..-|.+++.+|.|.+|...+.++..++..+ .++.|.+.||+|++.++.+|.+...+
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 4555555555544444 456788889999999999999999999999999986 58899999999999999999999999
Q ss_pred HHHHHHhh-------hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 84 ATFLVAFS-------STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 84 ~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
+..+...+ +++|.+.+..++.|.+.+....++.....+.+| ++||.+.|+.-...+++..+-..+...+...
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 98887764 367888888888888888877777777778897 4699999999999999998888877777654
No 169
>TIGR00895 2A0115 benzoate transport.
Probab=99.29 E-value=1.7e-10 Score=113.34 Aligned_cols=145 Identities=14% Similarity=0.045 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHH
Q 009914 9 VLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLV 88 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~ 88 (522)
..+.+..+.............|.+.+++|.++.+.+++.+...++..++.++.|++.||+|||+.+....+......++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 332 (398)
T TIGR00895 253 VLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVG 332 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 33444444444455555666788889999999999999999999999999999999999999955544444443333333
Q ss_pred HhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 89 AFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 89 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
....+.+.+++..++.|++.+...+...+++.|.+|+++|++++|+......+|..+||.++|.+
T Consensus 333 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 333 STLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 33567777788889999999999999999999999999999999999999999999999999875
No 170
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.29 E-value=2.6e-10 Score=111.95 Aligned_cols=143 Identities=11% Similarity=0.159 Sum_probs=123.0
Q ss_pred CCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHH
Q 009914 37 HTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQ 116 (522)
Q Consensus 37 g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 116 (522)
+.+....|.+.++..+...++.++.|++.||+|+|+.+.++.++.++...+....++.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667789999999999999999999999999999999999998888888878888999889999999998877776777
Q ss_pred HHHhhccCCCchhHHHHH-HHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhh
Q 009914 117 SLVADSTDDSNRGVAFGW-LQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRL 184 (522)
Q Consensus 117 ~~i~~~~~~~~r~~~~~~-~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~ 184 (522)
.++.+..+++.++...+. .+....+|.++++.++|++.+. .||+.+|.+.+++.++..+...+
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~-----~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS-----IGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh-----cccHHHHHHHHHHHHHHHHHHHH
Confidence 778887877777776665 6688999999999999999987 89999999999888877766544
No 171
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.28 E-value=8.2e-10 Score=108.86 Aligned_cols=155 Identities=17% Similarity=0.082 Sum_probs=119.1
Q ss_pred hhhHHHHH-HHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh-----hhHHHHH
Q 009914 25 LPGVYKEV-GAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS-----STFAQVA 98 (522)
Q Consensus 25 ~~~~~~~~-~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~ 98 (522)
.....|.+ .+++|.++.+.++......++..++.++.|++.||+++|+.+.++.++.+++.++..+. .+++.++
T Consensus 234 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 313 (406)
T PRK15402 234 WIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLT 313 (406)
T ss_pred HHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHH
Confidence 33344544 56789999999998888888899999999999999999999998888877777766653 2566677
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHH
Q 009914 99 ISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVV 178 (522)
Q Consensus 99 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~ 178 (522)
+..++.|++.+...+......... ++++|++..+..+....+|..+|+.+++.+.+. .++....+..++..++.
T Consensus 314 ~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~-----~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 314 AGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG-----GGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccC-----CchHHHHHHHHHHHHHH
Confidence 888899999888877766665443 458899999999999999999999999999876 56665555555444444
Q ss_pred HHhhhhc
Q 009914 179 GTLVRLF 185 (522)
Q Consensus 179 ~~~~~~~ 185 (522)
..+...+
T Consensus 388 ~~~~~~~ 394 (406)
T PRK15402 388 LLLVRIF 394 (406)
T ss_pred HHHHHHH
Confidence 4433333
No 172
>PRK15075 citrate-proton symporter; Provisional
Probab=99.28 E-value=4.3e-10 Score=111.74 Aligned_cols=139 Identities=14% Similarity=0.073 Sum_probs=101.0
Q ss_pred HHHHhhhhhhHHHHHHH-hcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH-HHH---hhh
Q 009914 18 ERADESLLPGVYKEVGA-ALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF-LVA---FSS 92 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~-~~~---~~~ 92 (522)
............|.+.+ .+|.+..+.+++.....++..++.+++|+++||+|||+++..+.++..+..+ ... ..+
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33444445555676654 4899999999999999999999999999999999999987776544332221 111 123
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHH-HHHHHHHHHHHHHhhhcc
Q 009914 93 TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLT-SNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 93 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~lg~~~g~~l~~~l~~~ 156 (522)
++..+.+..++.+++.+...+....++.|.+|+++|+..+++.... ..++..++|.+.+++.+.
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 4444445556667777777777778899999999999999986544 444577899999999887
No 173
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.28 E-value=2.5e-11 Score=115.27 Aligned_cols=163 Identities=12% Similarity=0.071 Sum_probs=115.1
Q ss_pred HHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCC
Q 009914 214 LIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPN 292 (522)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 292 (522)
.+....+++.++...+++....+... ...+.+++=-++++.+..+...|...+....+.++.-++.+++.+|+|+-+..
T Consensus 360 v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~ 439 (618)
T KOG3762|consen 360 VLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM 439 (618)
T ss_pred HHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee
Confidence 34444455666665554444433333 33445666667788888888888888888889999999999999999987531
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHH-
Q 009914 293 SGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFES- 371 (522)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~- 371 (522)
. .++.+...-..++.. -.++|..+..-++-|+..+.... ...++++...||+.++++.|+......
T Consensus 440 -----~----lgLa~~~~Rf~~~S~---L~n~W~vLPieilqgit~aliWa-a~~sY~s~vaPp~l~at~Q~l~~g~f~G 506 (618)
T KOG3762|consen 440 -----Y----LGLACNVGRFLYYSY---LQNPWMVLPIEILQGITHALIWA-AIISYASHVAPPGLRATAQGLLQGIFHG 506 (618)
T ss_pred -----e----ehhhHHHHHHHHHHH---hcCchheeeHHHHHHHHHHHHHH-HHHHHHHhhCCCcchHHHHHHHHHHhcc
Confidence 1 111111122222221 24556677788899999998888 889999999999999999999987754
Q ss_pred HHhchhhHHHHHHHHHhhC
Q 009914 372 ILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 372 ~~~~i~~~~~g~l~~~~~g 390 (522)
+|-.+|.+++|.+.+. +|
T Consensus 507 lG~g~GslIGG~~v~~-fg 524 (618)
T KOG3762|consen 507 LGKGLGSLIGGFVVER-FG 524 (618)
T ss_pred cCcchhhhhhhhhhee-eh
Confidence 7889999999999988 44
No 174
>PRK10054 putative transporter; Provisional
Probab=99.27 E-value=1.9e-10 Score=112.47 Aligned_cols=153 Identities=14% Similarity=0.056 Sum_probs=125.7
Q ss_pred HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhhH
Q 009914 34 AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS-STFAQVAISRALNGIGLALVA 112 (522)
Q Consensus 34 ~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~ 112 (522)
++.+.+....+++.+...+.....+++.|++.||+++|+.+..+..+..++.+...+. ++.+.+++..++.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 4556677788888888888888888999999999999999999988888888777664 567777788899999999888
Q ss_pred HHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCC
Q 009914 113 PAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFP 192 (522)
Q Consensus 113 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 192 (522)
|...+++.+..|++.|+++++..+ ...+|..+||.+++.+.++ .|....|++.++...+..++...-.++|++.
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT-----LPPWSLFVILALAIVAAWLLMLKGMRARPWG 390 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH-----cChhhHHHHHHHHHHHHHHHHHhccccCccc
Confidence 898999999999999999988655 5668999999999999998 8888888887776666666655444555543
No 175
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.27 E-value=1.1e-09 Score=107.18 Aligned_cols=150 Identities=13% Similarity=0.065 Sum_probs=119.8
Q ss_pred hHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 009914 27 GVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGI 106 (522)
Q Consensus 27 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 106 (522)
...|.+.+++|.++.+.+.+.....++..++.++.|++.||.+++..+....+......++....++.+.+.+..++.|+
T Consensus 238 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~ 317 (394)
T PRK10213 238 YIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34577888899999999999999999999999999999999654443443333344444444556677888888999999
Q ss_pred HhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhh
Q 009914 107 GLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLV 182 (522)
Q Consensus 107 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~ 182 (522)
+.+...+...+++.+..| +++++..+......++|..+|+.++|.+.+. .|++..++..+++.++..+..
T Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~ 387 (394)
T PRK10213 318 TFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN-----IGLTSPLMLSGTLMLLTALLV 387 (394)
T ss_pred HHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cChhhHHHHHHHHHHHHHHHH
Confidence 999999999999998886 5567888888889999999999999999987 899999988877665555443
No 176
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.26 E-value=3.4e-10 Score=110.97 Aligned_cols=162 Identities=14% Similarity=0.163 Sum_probs=123.9
Q ss_pred hhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH-hchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 009914 26 PGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR-HNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALN 104 (522)
Q Consensus 26 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 104 (522)
....|.+.++.+.++.+.+++.+...++......+.+++.|| ++.++.+..+.++.+++.+++++.++++.+.+..++.
T Consensus 228 ~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 307 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLF 307 (400)
T ss_pred HHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 345677666666688889999888877776666666776664 6667777788888888888888888888888888889
Q ss_pred HHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC-chHHHHHHHHHHHHHHHhhh
Q 009914 105 GIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG-WRISFHIVGLISVVVGTLVR 183 (522)
Q Consensus 105 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g-w~~~f~~~~~~~~i~~~~~~ 183 (522)
+++.+...|...+++.+..|+++|++.+++.+....+|..+||.+++++.+... ..+ ....+++.+++.++..+...
T Consensus 308 ~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 308 YIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK--ALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh--hcCCcchHHHHHHHHHHHHHHHHH
Confidence 999888889999999999999999999999999999999999999999987621 012 35666666666555555444
Q ss_pred hccCCC
Q 009914 184 LFANDP 189 (522)
Q Consensus 184 ~~~~~~ 189 (522)
...++|
T Consensus 386 ~~~~~~ 391 (400)
T PRK11646 386 WQFSQK 391 (400)
T ss_pred HHHhhc
Confidence 333333
No 177
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.25 E-value=1.2e-09 Score=108.45 Aligned_cols=159 Identities=11% Similarity=-0.041 Sum_probs=103.2
Q ss_pred hhhhhhHHHHH-HHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHH--h--hhhHHH
Q 009914 22 ESLLPGVYKEV-GAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVA--F--SSTFAQ 96 (522)
Q Consensus 22 ~~~~~~~~~~~-~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~--~--~~~~~~ 96 (522)
.+.+...+|.+ .+++|.+..+.+...++..+...++.++.|+++||+|||+.+.++.++.++...... . .++...
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYA 338 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 33344455654 466899999999999988888899999999999999999987776554433332111 1 122332
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHH-HHHHHHHHHHhhhcccccCCCCchHHHHHHHHHH
Q 009914 97 VAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNI-GSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLIS 175 (522)
Q Consensus 97 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~l-g~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~ 175 (522)
.+..-.+.+++.+...+....+++|++|++.|+.++|+.+...++ .....|.+.+.+... ..|...++..++..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~-----g~~~~~~~~~~~~~ 413 (432)
T PRK10406 339 AFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSI-----GMETAFFWYVTLMA 413 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHh-----CCCcHHHHHHHHHH
Confidence 222222233333444455678889999999999999998876554 344577777755432 33666666666666
Q ss_pred HHHHHhhhhc
Q 009914 176 VVVGTLVRLF 185 (522)
Q Consensus 176 ~i~~~~~~~~ 185 (522)
++..+..+++
T Consensus 414 ~i~~~~~~~l 423 (432)
T PRK10406 414 VVAFLVSLML 423 (432)
T ss_pred HHHHHHHHHh
Confidence 6555555543
No 178
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.24 E-value=1.6e-09 Score=106.59 Aligned_cols=150 Identities=15% Similarity=0.122 Sum_probs=109.0
Q ss_pred HHHHHHhcCCChhhhHHHHHHHH-HHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHHH-
Q 009914 29 YKEVGAALHTDPTGLGSLTLFRS-IVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLV---AFS-STFAQVAISRA- 102 (522)
Q Consensus 29 ~~~~~~~~g~s~~~~g~~~s~~~-~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~- 102 (522)
.+.+.+++|.++.++|++.+... ++..++.+++|++.||+|+|+.+..+..+.++..+.+ ++. ++.+.+++.-+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 45677789999999999986654 5688899999999999999998877776655554333 343 35555555543
Q ss_pred ---HHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHH
Q 009914 103 ---LNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVG 179 (522)
Q Consensus 103 ---l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~ 179 (522)
..|++.+...+....++.+.+|.+ ..++.....++|.++++.+++.+.+. .||+..|.+.++++++..
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~-----~G~~~~f~~~~~~~~~~~ 383 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSAT----QYALLSALASVGRVYVGPTSGYLVEA-----YGWPGFYLMTVVIALPGL 383 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHHHHHHHHHHHHHHH
Confidence 445555666666666777666644 44566666678887777789999988 899999999998888876
Q ss_pred HhhhhccC
Q 009914 180 TLVRLFAN 187 (522)
Q Consensus 180 ~~~~~~~~ 187 (522)
++.+..++
T Consensus 384 ~~~~~~~~ 391 (402)
T PRK11902 384 ALLWLMRG 391 (402)
T ss_pred HHHHHHhh
Confidence 66655443
No 179
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.24 E-value=3.5e-10 Score=114.53 Aligned_cols=166 Identities=13% Similarity=0.034 Sum_probs=108.9
Q ss_pred HhhhhhhHHHHHHHhcCCChhhhHH------------HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHH
Q 009914 21 DESLLPGVYKEVGAALHTDPTGLGS------------LTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLV 88 (522)
Q Consensus 21 ~~~~~~~~~~~~~~~~g~s~~~~g~------------~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~ 88 (522)
..+......|.+.++.|.+....+. ...+..++..++.++.++++||+|||++++++..+.+++.++.
T Consensus 303 ~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l 382 (502)
T TIGR00887 303 AFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVL 382 (502)
T ss_pred HHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHH
Confidence 3333444567777788876543211 2233445666688899999999999999988887777766655
Q ss_pred Hhhhh----HHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccc-----
Q 009914 89 AFSST----FAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFM----- 159 (522)
Q Consensus 89 ~~~~~----~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~----- 159 (522)
++..+ ...+...-+...++.....+....+.+|.+|.+.|+++.++.+....+|.++++.+.+.+.+....
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 462 (502)
T TIGR00887 383 GFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYP 462 (502)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccc
Confidence 54321 111111111112222233455667789999999999999999999999999999999988763100
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhcc
Q 009914 160 GIPGWRISFHIVGLISVVVGTLVRLFA 186 (522)
Q Consensus 160 ~~~gw~~~f~~~~~~~~i~~~~~~~~~ 186 (522)
...++...|++.++..++..+..+++|
T Consensus 463 ~~~~~~~~~~i~~~~~~~~~i~~~~lp 489 (502)
T TIGR00887 463 TGIWMGHVLEIFALFMFLGILFTLLIP 489 (502)
T ss_pred ccccchHHHHHHHHHHHHHHHHheEec
Confidence 013456788888887777666554444
No 180
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.22 E-value=1.8e-09 Score=104.49 Aligned_cols=182 Identities=14% Similarity=0.211 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcC-CChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALH-TDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF 86 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~ 86 (522)
+....+..++.+..........+.+.++.| .+....|.+.++..+.-.+.-.+.+++..|+|.|+++.++.+.+++=..
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~ 288 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWL 288 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 334445555666666666666777777888 6778888888888888889999999999999999999999999999888
Q ss_pred HHHhh-hhHHHHH----HHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHH-HHHHHHHHHHHHHHhhhcccc-c
Q 009914 87 LVAFS-STFAQVA----ISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQL-TSNIGSLVGGLFSVVMAPMTF-M 159 (522)
Q Consensus 87 ~~~~~-~~~~~l~----~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~lg~~~g~~l~~~l~~~~~-~ 159 (522)
+++.. ++.+... +...+.|+..+....+...++.+..|++.|+++.+++.. ..++|..+|..++|++.+... .
T Consensus 289 l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 289 LYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred HHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcch
Confidence 88887 4544433 335679999999999999999999999999999999876 468999999999999998721 1
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhhhccCCC
Q 009914 160 GIPGWRISFHIVGLISVVVGTLVRLFANDP 189 (522)
Q Consensus 160 ~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 189 (522)
....|...+.+.+++.++..++.+++.|++
T Consensus 369 ~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 369 GMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 123456667777777767666666655443
No 181
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.22 E-value=5.3e-10 Score=103.93 Aligned_cols=156 Identities=21% Similarity=0.168 Sum_probs=131.3
Q ss_pred hhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 009914 26 PGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNG 105 (522)
Q Consensus 26 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 105 (522)
.....+-..++|++..++.++.....+..+++++++|++.||+|.|+++..+++++.+.++...+...-..+.++-.+.|
T Consensus 273 ~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g 352 (438)
T COG2270 273 AMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVG 352 (438)
T ss_pred HHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 33334445599999999999999999999999999999999999999999999999888887777777677778889999
Q ss_pred HHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhc
Q 009914 106 IGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLF 185 (522)
Q Consensus 106 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~ 185 (522)
++.|..+..+.++..+..|++|-++.+|++......+..+||.+-+.+.+.+ .+-|..+....++..+..++....
T Consensus 353 ~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT----g~~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 353 TSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT----GSSRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred HhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh----cchhhHHHHHHHHHHhhHhhEEee
Confidence 9999999999999999999999999999999999999999999999988763 446666666655544444443333
No 182
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.22 E-value=3.7e-10 Score=111.17 Aligned_cols=142 Identities=13% Similarity=0.168 Sum_probs=100.7
Q ss_pred ccchhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHh-hhcCCCchhHHHHHHHHHHHHHHHHHHH
Q 009914 237 GSFPWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL-SARFPNSGRIILAQISSLSAIPLAALLL 314 (522)
Q Consensus 237 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (522)
....|+...++|.|+. ++|++..+++.+.........++.+++|+++||+ |+|+ .+...... ..+ ... .
T Consensus 22 ~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr-----~iliG~il-~~l--g~l-l 92 (493)
T PRK15462 22 YFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRM-----AVMLGALL-MAI--GHV-V 92 (493)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH-----HHHHHHHH-HHH--HHH-H
Confidence 3345677789999986 5899999999999999999999999999999999 9884 33222111 111 111 1
Q ss_pred HhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcc--hhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 315 LVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK--SRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
+.... .......+...+..++.+...+ ...+++.|.+|++ .|.++.++.....++|+.++|.+.|++.+. .||
T Consensus 93 l~~~~--~~~~~~~l~l~li~iG~G~~~~-~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~-~Gw 167 (493)
T PRK15462 93 LGASE--IHPSFLYLSLAIIVCGYGLFKS-NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE-YSW 167 (493)
T ss_pred HHHhh--cchhHHHHHHHHHHHhcccccc-cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh-hCh
Confidence 11111 1111122333444455565556 6788999999875 699999999999999999999999999887 566
No 183
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.21 E-value=9e-07 Score=86.56 Aligned_cols=278 Identities=10% Similarity=-0.003 Sum_probs=163.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCC-----ChhhhHHHHHHHHHHHHhh-hhhHHHHHHHhchhHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHT-----DPTGLGSLTLFRSIVQASC-YPIAAYLAIRHNRAHVIALGA 78 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----s~~~~g~~~s~~~~~~~i~-~~~~G~l~Dr~grr~~l~~~~ 78 (522)
++.++...+..|+..+.+++. -.+.+.+.. +.+.+.++-+...+..++. .++.+++++|++|++++-+..
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iL----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~ 81 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTIL----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence 344555555556555555444 445555544 3467889988888877776 899999999999999987777
Q ss_pred HHHHHHHHHHHhh--h-----------------------------hHHHHHHHHHHHHHHhhhhHH-HHHHHHhhccCCC
Q 009914 79 FLWAAATFLVAFS--S-----------------------------TFAQVAISRALNGIGLALVAP-AIQSLVADSTDDS 126 (522)
Q Consensus 79 ~~~~~~~~~~~~~--~-----------------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~ 126 (522)
..+.+..+++++. | +.|...+..+...+....... ...+++.|.++.+
T Consensus 82 ~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~ 161 (472)
T TIGR00769 82 SPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTID 161 (472)
T ss_pred HHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 7666666665554 1 123334455555565555555 7789999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhccc---ccCCCCch----HHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCC
Q 009914 127 NRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT---FMGIPGWR----ISFHIVGLISVVVGTLVRLFANDPHFPDGGTANS 199 (522)
Q Consensus 127 ~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~---~~~~~gw~----~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 199 (522)
|-.|.+++...+.++|.++++.+..++.+.. ......|. ..+.+.++..++...+.+++.+.....+...+.+
T Consensus 162 qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 241 (472)
T TIGR00769 162 EAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPA 241 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchh
Confidence 9999999999999999999999988876321 01113442 3334444444444444333332221111000000
Q ss_pred cccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchhHHHHH-HHHHHHHhCCChhH----HHHHHHHHHHHHhc
Q 009914 200 DQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSALSF-AAMWLELTGFSHEK----TAFLMALFVIASSL 274 (522)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~----~~~~~~~~~~~~~~ 274 (522)
+.+++++.. ....+..+.++++|.++.+....+++......... .-..+++..-++.+ .|.+....++..++
T Consensus 242 ~~~~k~k~k---~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~ 318 (472)
T TIGR00769 242 LKEKKVKPK---MSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVT 318 (472)
T ss_pred hccccCCCC---CCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000010111 23456667788888877766655555443222211 12222332233332 23344445556666
Q ss_pred cchhhhhhhhHhhhc
Q 009914 275 GGLFGGRMGDFLSAR 289 (522)
Q Consensus 275 ~~~~~g~l~~~~~~~ 289 (522)
..++.+++.+|+|-+
T Consensus 319 ~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 319 MMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHhhHH
Confidence 666778999998877
No 184
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.21 E-value=2.3e-10 Score=113.59 Aligned_cols=177 Identities=16% Similarity=0.198 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhc--hhHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHN--RAHVIALGAFLWAA 83 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g--rr~~l~~~~~~~~~ 83 (522)
+.++.+.+...+..+........+|.+.++.+.+..+.+.+.++..+...++.+..|+++|+.. ++.+..++++..++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 5677788888888888899999999999999999999999999999999999999999999988 45567788888888
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC
Q 009914 84 ATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG 163 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g 163 (522)
+.+.+++.++++.++..-++.|+..|.........+.|..+.++...+.|+...+.+++.++||++++.+.+.. .+
T Consensus 378 ~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t----g~ 453 (509)
T KOG2504|consen 378 ARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT----GN 453 (509)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeecc----CC
Confidence 88899999999999999999999999999888889999999999999999999999999999999999888762 34
Q ss_pred chHHHHHHHHHHHHHHHhhhhcc
Q 009914 164 WRISFHIVGLISVVVGTLVRLFA 186 (522)
Q Consensus 164 w~~~f~~~~~~~~i~~~~~~~~~ 186 (522)
|...|+..++..++.....+..+
T Consensus 454 Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 454 YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeehhhcChHHHHHHHHHHHhH
Confidence 99999999998888877666655
No 185
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.21 E-value=1.7e-09 Score=107.85 Aligned_cols=147 Identities=18% Similarity=0.236 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHh-cCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 009914 9 VLVNLAGIMERADESLLPGVYKEVGAA-LHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFL 87 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~ 87 (522)
..+.+..++............+.+.++ ++ ++.+.+++.++..++..++.+++++++||+|+|+++..+.++.+++.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~ 303 (437)
T TIGR00792 225 LILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLI 303 (437)
T ss_pred HHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444433 34 5667788888889999999999999999999999999998888888777
Q ss_pred HHhh-hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 88 VAFS-STFAQVAISRALNGIGLALVAPAIQSLVADSTD-------DSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 88 ~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
..+. ++.+.+++..++.|++.+...+...++++|..+ ++++|..+++.+....+|..+++.+.+.+.+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~ 380 (437)
T TIGR00792 304 FFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI 380 (437)
T ss_pred HHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7665 356677778888999999999999999998865 45579999999999999999999999998865
No 186
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.21 E-value=5.1e-10 Score=109.52 Aligned_cols=133 Identities=14% Similarity=0.166 Sum_probs=102.9
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 009914 245 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 324 (522)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (522)
...|.+.+++|.+..+.+++.+...++..++.++.|++.||+++|+ .+..... +..+...... . .++.
T Consensus 26 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~-----~~~~~~~-~~~~~~~~~~-~-----~~~~ 93 (385)
T TIGR00710 26 PAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRP-----VLLLGLF-IFALSSLGLA-L-----SNNI 93 (385)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH-----HHHHHHH-HHHHHHHHHH-H-----HccH
Confidence 3467777889999999999999999999999999999999999984 3332211 1111111111 1 1234
Q ss_pred HHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 325 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
+.+.+..++.|++.+...+ ...+++.|.+|+++|+++.|+.+....++..++|.+.+.+.+. .+|
T Consensus 94 ~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~~~ 158 (385)
T TIGR00710 94 ETLLVLRFVQAFGASAGSV-ISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW-LSW 158 (385)
T ss_pred HHHHHHHHHHHcchhHHHH-HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCH
Confidence 4466677788888887777 7889999999999999999999999999999999999999887 565
No 187
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.21 E-value=2e-09 Score=105.12 Aligned_cols=153 Identities=15% Similarity=0.134 Sum_probs=112.4
Q ss_pred hHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHH
Q 009914 27 GVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAF-SSTFAQVAISRALNG 105 (522)
Q Consensus 27 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G 105 (522)
...|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+..++..++.+
T Consensus 221 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 300 (382)
T PRK10091 221 YIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICC 300 (382)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3445666778999999999999999999999999999999999999998888887877765543 455555566666666
Q ss_pred HHhhhhHHHHHH-HHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhh
Q 009914 106 IGLALVAPAIQS-LVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRL 184 (522)
Q Consensus 106 ~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~ 184 (522)
++.....+.... ...+..+++.++.. ..+....+|..+||.+++++.+.. .+|+..+.+.+++.++.......
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 301 AGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLG----LAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcc----cCcchHHHHHHHHHHHHHHHHHH
Confidence 665544444443 33443344444443 346678899999999999998742 68999999887776666554444
Q ss_pred c
Q 009914 185 F 185 (522)
Q Consensus 185 ~ 185 (522)
.
T Consensus 375 ~ 375 (382)
T PRK10091 375 Y 375 (382)
T ss_pred H
Confidence 3
No 188
>TIGR00898 2A0119 cation transport protein.
Probab=99.20 E-value=9.1e-10 Score=111.89 Aligned_cols=146 Identities=14% Similarity=0.145 Sum_probs=115.2
Q ss_pred HHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHhh
Q 009914 32 VGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTF--AQVAISRALNGIGLA 109 (522)
Q Consensus 32 ~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~ 109 (522)
....++.+.. +......+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+..++.+++.+
T Consensus 349 ~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (505)
T TIGR00898 349 DLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGIT 425 (505)
T ss_pred cccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Confidence 3344555433 33344456677788899999999999999999999988888887776643 445556667777777
Q ss_pred hhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccC
Q 009914 110 LVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFAN 187 (522)
Q Consensus 110 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 187 (522)
...+....+..|.+|++.|+.++|+.+....+|.+++|.+.+ +.. .++..++++.++..++..++.+++|+
T Consensus 426 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~lpe 496 (505)
T TIGR00898 426 SAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE------KWLFLPLVLFGGLALLAGILTLFLPE 496 (505)
T ss_pred HHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH------HHHhhHHHHHHHHHHHHHHHHHcCcC
Confidence 888888899999999999999999999999999999999988 443 56778888888888888777776664
No 189
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.20 E-value=3.9e-10 Score=104.80 Aligned_cols=178 Identities=13% Similarity=0.060 Sum_probs=141.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHH-HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYK-EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
.+..+.+++.++...-....++..+| ++.++|+.++.+.|.+...+.+...+..+.+|+++||+|.+|++.+....+++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMAL 296 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHH
Confidence 34566677777777777777777777 56778999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHhh-------hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 84 ATFLVAFS-------STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 84 ~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
+..+..+. ++....+..-+..++..|........++...+|+ +-+.+.|+..+..++|...-|..-+...+.
T Consensus 297 ~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~ 375 (417)
T COG2223 297 AAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDL 375 (417)
T ss_pred HHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHh
Confidence 88777765 3444444444444555555555666888888864 679999999999999998888888887776
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHhhhhccC
Q 009914 157 TFMGIPGWRISFHIVGLISVVVGTLVRLFAN 187 (522)
Q Consensus 157 ~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 187 (522)
. ..+...|++...+.+++.++.+....
T Consensus 376 t----g~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 376 T----GSYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred c----ccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 34999999999999888887776543
No 190
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.20 E-value=9.1e-10 Score=104.65 Aligned_cols=149 Identities=13% Similarity=0.176 Sum_probs=130.3
Q ss_pred CCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHH
Q 009914 37 HTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQ 116 (522)
Q Consensus 37 g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 116 (522)
+.+....|.+.++..+.-++...+..++.+|+|.|+.++++..++++=.++++++++.+.+.+.+.+.|+-.+....+..
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCchhHHHHH-HHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCC
Q 009914 117 SLVADSTDDSNRGVAFGW-LQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPH 190 (522)
Q Consensus 117 ~~i~~~~~~~~r~~~~~~-~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~ 190 (522)
.++++.+|++-.++...+ .+...++|.++.+.++|.+.+. .|.+..|++.+.+.++..++..+..++++
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~-----~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDR-----IGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh-----cCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 999999998887778777 4688899999999999999998 89999999999998888888887655433
No 191
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.20 E-value=4.9e-10 Score=111.99 Aligned_cols=151 Identities=14% Similarity=0.153 Sum_probs=109.9
Q ss_pred HHHHHHHhhhc-cchhHHHHHHHHHHHH---hCCChhHHHHHHHHHHHHHhccchhhhhhhhH-hhhcCCCchhHHHHHH
Q 009914 227 FQIIVAQGVTG-SFPWSALSFAAMWLEL---TGFSHEKTAFLMALFVIASSLGGLFGGRMGDF-LSARFPNSGRIILAQI 301 (522)
Q Consensus 227 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~ 301 (522)
++.+....+.. ...++...++|.|+++ +|++..+++.+.+...++..++.+++|+++|| +|+|+ .+....
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~-----~l~~~~ 86 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKK-----TMVLGG 86 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHH-----HHHHHH
Confidence 33444444443 3356777889999974 79999999999999999999999999999999 79984 333222
Q ss_pred HHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcch---hHHHHHHHHHHHHHHhchhh
Q 009914 302 SSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKS---RTSVYAMDRSFESILSSFAP 378 (522)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~i~~ 378 (522)
. +.++. . ..... . ++.+.+.+...+.|++.+...+ ...+++.+.+|+++ |+++.++.+...++|..++|
T Consensus 87 ~-~~~~g--~-~~~~~--~-~~~~~~~~~~~l~g~g~g~~~~-~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~ 158 (475)
T TIGR00924 87 I-VLMLG--H-FMLAM--S-IYPDLIFYGLGTIAVGSGLFKA-NPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISP 158 (475)
T ss_pred H-HHHHH--H-HHHHh--c-ccHhHHHHHHHHHHhccccccC-CHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHH
Confidence 1 11111 1 11111 1 2233345566678888888777 78889999998654 88899999999999999999
Q ss_pred HHHHHHHHHhhCc
Q 009914 379 PVVGILAQHVYGF 391 (522)
Q Consensus 379 ~~~g~l~~~~~g~ 391 (522)
.+.|++.+. .||
T Consensus 159 ~l~g~l~~~-~g~ 170 (475)
T TIGR00924 159 LLAGVIAEN-YGY 170 (475)
T ss_pred HHHHHHHHh-cCh
Confidence 999999987 565
No 192
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.19 E-value=2.9e-09 Score=96.76 Aligned_cols=369 Identities=12% Similarity=0.074 Sum_probs=210.6
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHH-----HhchhHH-HHHH
Q 009914 4 ETVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAI-----RHNRAHV-IALG 77 (522)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~D-----r~grr~~-l~~~ 77 (522)
.++.+..+.+.+.+.+.-.+... .+|.+.+.-|.|.++.+....++ ..+. ..++|.++.| |+||||. ++-.
T Consensus 29 d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay-~P~s-LKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAY-WPFS-LKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred hhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhh-hHHH-HHHHHHhhhHHHHHHhhccccceeeeh
Confidence 45667788888889988888888 88999999999998887644332 3333 3678899999 9999886 3334
Q ss_pred HHHHHHHHHHHHhh-----------hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHH
Q 009914 78 AFLWAAATFLVAFS-----------STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVG 146 (522)
Q Consensus 78 ~~~~~~~~~~~~~~-----------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g 146 (522)
..+.+..+++.+.- ++...+....++.-+..+.-..+...+.-.+..+++.+-+......+...|..++
T Consensus 106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 44433333333321 2333343445566666777788888888888888888877777777777776666
Q ss_pred HHHHHhhhccc---------c--cCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccchhhhhhHHHH
Q 009914 147 GLFSVVMAPMT---------F--MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLI 215 (522)
Q Consensus 147 ~~l~~~l~~~~---------~--~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (522)
..+--.+...+ + .+...-..-.++.|.+.++...+..+..++++....+ +....+++..
T Consensus 186 ~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~----------e~~~~i~~~y 255 (510)
T KOG3574|consen 186 NVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDE----------ELELGIHESY 255 (510)
T ss_pred cceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhh----------hhhcCHHHHH
Confidence 55433332210 0 0111112233445555556655555555444332111 1111235566
Q ss_pred HHhhhhhcchhHHHHHHHhhhccchh-HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCch
Q 009914 216 QEAKSVIKIPSFQIIVAQGVTGSFPW-SALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSG 294 (522)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 294 (522)
+-.+.+++-|....+.......=..+ +.....+.-+-+.|++..+.+.+..+..-.+++.....|++..+..+-.+..+
T Consensus 256 k~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lk 335 (510)
T KOG3574|consen 256 KLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLK 335 (510)
T ss_pred HHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHH
Confidence 66667777776666555444444433 33345666677899999887766644333444444433333321111000000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCC--------chhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHH
Q 009914 295 RIILAQISSLSAIPLAALLLLVLPDDP--------STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMD 366 (522)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 366 (522)
+...-.. .+.....+.+ ..+... ....+.+....+.+...-..+. ..++..+++.||...|+.+.+.
T Consensus 336 a~~~R~~---~~~~~t~Lv~-~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv-~~maf~aqisdp~iggTymTlL 410 (510)
T KOG3574|consen 336 AVPYRLG---GGLVQTALVW-WTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFV-SGMAFHAQISDPAIGGTYMTLL 410 (510)
T ss_pred hhhHHHH---HHHHHHHHHh-hhcccccCCCceeechHHHHHHHHHHhhhHHHHHHH-HHHHHHhhcCCcccCccHHHHH
Confidence 1111111 1111111111 111111 1111122223333433333334 4678888999999999999999
Q ss_pred HHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 367 RSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 367 ~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
|+..++|+..-..+..++.|. .++
T Consensus 411 NTLsnLGg~wp~tv~l~l~D~-ltv 434 (510)
T KOG3574|consen 411 NTLSNLGGNWPGTVALWLADG-LTV 434 (510)
T ss_pred HHHHHhcCCcHHHHHHHhccc-Cce
Confidence 999999999999999999998 554
No 193
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.19 E-value=8.6e-10 Score=110.62 Aligned_cols=153 Identities=12% Similarity=0.106 Sum_probs=107.0
Q ss_pred hhHHH-HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchh-------HHHHHHHHHHHHHHHHHHhhhhHHHH
Q 009914 26 PGVYK-EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRA-------HVIALGAFLWAAATFLVAFSSTFAQV 97 (522)
Q Consensus 26 ~~~~~-~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr-------~~l~~~~~~~~~~~~~~~~~~~~~~l 97 (522)
...+| ++.+++|.+..+.+.+.++..++..++.+++|+++||++|| ..+.+..++.++..++....++.+..
T Consensus 272 ~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~ 351 (476)
T PLN00028 272 DNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAA 351 (476)
T ss_pred HhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 33344 44667899999999999999999999999999999999875 22333333333334444555566655
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHH
Q 009914 98 AISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVV 177 (522)
Q Consensus 98 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i 177 (522)
.+..++.+++.+...+...+++.+.. +++++...|+...+..+|..+++.+.+ .... .+|+..|++.+++.++
T Consensus 352 ~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~-----~~y~~~f~~~~~~~~i 424 (476)
T PLN00028 352 IVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSS-----YSTETGISLMGVMIIA 424 (476)
T ss_pred HHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCC-----ccHhhHHHHHHHHHHH
Confidence 66666667766666666666667654 467899999987777777777766543 1112 5799999999888777
Q ss_pred HHHhhhhc
Q 009914 178 VGTLVRLF 185 (522)
Q Consensus 178 ~~~~~~~~ 185 (522)
..++.++.
T Consensus 425 ~~~~~~~~ 432 (476)
T PLN00028 425 CTLPVAFI 432 (476)
T ss_pred HHHHHHhe
Confidence 76666554
No 194
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.18 E-value=1.7e-09 Score=106.43 Aligned_cols=128 Identities=16% Similarity=0.084 Sum_probs=98.3
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhH
Q 009914 246 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 325 (522)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (522)
..|.+.+++|++..+.+++.+...++..++.+..|++.||+|+|+ .+.... .+..+ ..... .. .++.+
T Consensus 30 ~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~-----~~~~~~-~~~~~--~~~~~-~~---~~~~~ 97 (412)
T TIGR02332 30 AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARR-----WIAGIM-VLWGI--ASTAT-MF---ATGPE 97 (412)
T ss_pred HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH-----HHHHHH-HHHHH--HHHHH-HH---hcCHH
Confidence 456555789999999999999999999999999999999999994 222221 11111 11111 11 12334
Q ss_pred HHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 009914 326 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 386 (522)
Q Consensus 326 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~ 386 (522)
.+.+.-++.|++.+...+ ....++.|.+|+++|+++.|+.+....+|..+++.+.+++.+
T Consensus 98 ~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 157 (412)
T TIGR02332 98 SLYLLRILVGIAEAGFLP-GILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILA 157 (412)
T ss_pred HHHHHHHHHHHHHhhHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 466677888999988777 777889999999999999999999999999999999999875
No 195
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.16 E-value=4.8e-09 Score=98.62 Aligned_cols=160 Identities=16% Similarity=0.092 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHH---hcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHH
Q 009914 7 TLVLVNLAGIMERADESLLPGVYKEVGA---ALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAA 83 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~ 83 (522)
.+.+..++.++............+.+.+ .+|.++.+.++..+.+..+..++.++.+++.||+|+|+.+.++..+.++
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~ 220 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVL 220 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 3444455555555445555555555554 3699999999999999999999999999999999999998888888877
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC
Q 009914 84 ATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG 163 (522)
Q Consensus 84 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g 163 (522)
+.++....++...+ ..-++.|++.+..+|...+...+..|++ .+++.++. ....+|..++|++.|.+.+. .|
T Consensus 221 ~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~-----~g 292 (310)
T TIGR01272 221 LSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADC-----LG 292 (310)
T ss_pred HHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHh-----cc
Confidence 77666555544333 3556889999999999999999988754 45666665 56778999999999999887 78
Q ss_pred chHHHHHHHHH
Q 009914 164 WRISFHIVGLI 174 (522)
Q Consensus 164 w~~~f~~~~~~ 174 (522)
.+..|++..+.
T Consensus 293 ~~~a~~v~~~~ 303 (310)
T TIGR01272 293 IQLAFALPVPC 303 (310)
T ss_pred chHHHHHHHHH
Confidence 88888755443
No 196
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.16 E-value=1.2e-09 Score=122.38 Aligned_cols=147 Identities=18% Similarity=0.173 Sum_probs=124.6
Q ss_pred HHHHHHHhcCCChh-hhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 009914 28 VYKEVGAALHTDPT-GLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGI 106 (522)
Q Consensus 28 ~~~~~~~~~g~s~~-~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 106 (522)
+.+++.+.+|.+.. +.|++.+...++.+++.+++|++.||+++++.+.++.++.+++.+++.+..+.+.+++..++.|+
T Consensus 255 ~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 255 FPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF 334 (1146)
T ss_pred hHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 33455677899999 99999999999999999999999999999999988888888888888888888888899999999
Q ss_pred HhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHH
Q 009914 107 GLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVV 178 (522)
Q Consensus 107 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~ 178 (522)
+.+...+...+++.+..|+++|++++++.+....+|.++++.+++.+.... .++...|++.+.+.++.
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLG----LSPAGLFYLIALVTLIG 402 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhc----cCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988888887765421 45666666655544433
No 197
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.16 E-value=3.3e-09 Score=103.76 Aligned_cols=147 Identities=16% Similarity=0.061 Sum_probs=116.5
Q ss_pred HHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 009914 30 KEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLA 109 (522)
Q Consensus 30 ~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 109 (522)
+.+.+.+|.++.+.|++.+...++..+++++.+++.||.++|+++..+.. .++..++..+.++++...+..++.|++.+
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 34566789999999999999999999999999999999999988877753 44445555666777777788889999999
Q ss_pred hhHHHHHHHHhhccCCCc-hhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhh
Q 009914 110 LVAPAIQSLVADSTDDSN-RGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVR 183 (522)
Q Consensus 110 ~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~ 183 (522)
...+...+.+.+..|++. ++++.++.+...++|..++..+.+.+.. .|-+..+++.++..++...+.+
T Consensus 309 ~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 309 FFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVK------LGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred hhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHH
Confidence 888888899888766554 7999999999999999999999987754 5666666665554444444443
No 198
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.15 E-value=6e-08 Score=99.20 Aligned_cols=161 Identities=12% Similarity=0.108 Sum_probs=129.3
Q ss_pred hhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH-hchhHHHHHHHHHHHHHHHHHHhhhh--------H
Q 009914 24 LLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR-HNRAHVIALGAFLWAAATFLVAFSST--------F 94 (522)
Q Consensus 24 ~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~grr~~l~~~~~~~~~~~~~~~~~~~--------~ 94 (522)
+...+..++.+.+|.+.+....+...+....-+...++|.++|+ +|+++.++++.++..++.++.++... .
T Consensus 6 m~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~ 85 (654)
T TIGR00926 6 MRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHD 85 (654)
T ss_pred cHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHH
Confidence 44555667777899999999999988888888999999999996 79999999999999999888876421 2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhccCCC---chhHHHHHHHHHHHHHHHHHHHHHHhhhccc-c-cCCCCchHHHH
Q 009914 95 AQVAISRALNGIGLALVAPAIQSLVADSTDDS---NRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT-F-MGIPGWRISFH 169 (522)
Q Consensus 95 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~-~-~~~~gw~~~f~ 169 (522)
...+++-.+.++|.|+.-|...+...|.++++ +|...+.++..+.++|.++++.+..++.+.. . ....+|...|.
T Consensus 86 ~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~ 165 (654)
T TIGR00926 86 LLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFG 165 (654)
T ss_pred HHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHH
Confidence 33567778888999999999999999999754 3677889999999999999999998886331 0 01147999999
Q ss_pred HHHHHHHHHHHhhhh
Q 009914 170 IVGLISVVVGTLVRL 184 (522)
Q Consensus 170 ~~~~~~~i~~~~~~~ 184 (522)
+.++..++..++...
T Consensus 166 i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 166 VPAILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998887777666544
No 199
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.15 E-value=2e-09 Score=108.33 Aligned_cols=152 Identities=17% Similarity=0.172 Sum_probs=102.5
Q ss_pred HHHHHHHhhhccc-hhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhH-hhhcCCCchhHHHHHHHH
Q 009914 227 FQIIVAQGVTGSF-PWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF-LSARFPNSGRIILAQISS 303 (522)
Q Consensus 227 ~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~ 303 (522)
++..+...+.... .+....+++.|++ ++|++..+++..............+++|+++|| +|+|+ .+.....
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~-----~~~~g~~- 96 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKR-----VIMLGAI- 96 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH-----HHHHHHH-
Confidence 4444444333333 5677788999985 699999988888777665555556789999999 59983 3332221
Q ss_pred HHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcch--hHHHHHHHHHHHHHHhchhhHHH
Q 009914 304 LSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKS--RTSVYAMDRSFESILSSFAPPVV 381 (522)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~i~~~~~ 381 (522)
+..+ .... .... ......+.+...+.|++.+...+ ...+++.+.+|+++ +..+.++.+...++|..++|.+.
T Consensus 97 ~~~i--g~~l-~~~~--~~~~~~l~~~~~l~gig~g~~~~-~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~ 170 (500)
T PRK09584 97 VLAI--GYAL-VAWS--GHDAGIVYMGMATIAVGNGLFKA-NPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLAT 170 (500)
T ss_pred HHHH--HHHH-HHHh--cccHHHHHHHHHHHHHhhhcccC-CHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHH
Confidence 1111 1111 1111 12233344566677888887777 77789999997643 45678888999999999999999
Q ss_pred HHHHHHhhCc
Q 009914 382 GILAQHVYGF 391 (522)
Q Consensus 382 g~l~~~~~g~ 391 (522)
|++.+. .||
T Consensus 171 g~l~~~-~g~ 179 (500)
T PRK09584 171 PWLAAK-YGW 179 (500)
T ss_pred HHHHHh-hCH
Confidence 999987 676
No 200
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.14 E-value=2.1e-09 Score=103.88 Aligned_cols=144 Identities=17% Similarity=0.105 Sum_probs=112.4
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHh-chhHHHHHHHHHHHHHHHHHHh
Q 009914 12 NLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRH-NRAHVIALGAFLWAAATFLVAF 90 (522)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-grr~~l~~~~~~~~~~~~~~~~ 90 (522)
.+..++...........+|.+.++.|.+..+.+.+.+...++..++.++.|++.||+ +||+.+..+.++.+++.+.+.+
T Consensus 203 ~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 282 (355)
T TIGR00896 203 TVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLF 282 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 333334444444455667877778999999999999999999999999999999999 5666777888888777777766
Q ss_pred hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccC-CCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 91 SSTFAQVAISRALNGIGLALVAPAIQSLVADSTD-DSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 91 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
.++..... ..++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+.+.
T Consensus 283 ~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 283 APMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred hhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65433322 4567899999999888777765554 46678889999999999999999999999876
No 201
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.13 E-value=4.7e-08 Score=92.49 Aligned_cols=316 Identities=15% Similarity=0.048 Sum_probs=187.1
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q 009914 43 LGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADS 122 (522)
Q Consensus 43 ~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 122 (522)
.+.+.-+..+...+..+.+-++.+|+..+.=+....++++++.++.+++++.+.=+++-++.+++.|........+.. .
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 355777777888888888999999988665566666788889999999999998899999999999988888777755 5
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCC---
Q 009914 123 TDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANS--- 199 (522)
Q Consensus 123 ~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--- 199 (522)
+++ ...+-+..+.+.++++|+..-..+.... ...|..+++...+.++..+..++..+.|+......+.+
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g----~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~ 211 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTTLG----LSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED 211 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHHhC----cCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC
Confidence 553 3577788888888888887766555421 45577888877776666655555444332211111000
Q ss_pred --cc---ccc-------chhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchhHHHH-HHHHHH-H-HhCCChhHHHHH
Q 009914 200 --DQ---VSS-------KSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSALS-FAAMWL-E-LTGFSHEKTAFL 264 (522)
Q Consensus 200 --~~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~g~~~~~~~~~ 264 (522)
++ ..+ .......++.++..+. .++.++-....+..-|.+.. ..|... . ...-...+..+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~-----Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y 286 (402)
T PF02487_consen 212 EAEDDLLESETSESKPDSSSKLSFKEKLKRLKP-----LLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWY 286 (402)
T ss_pred cccccccccccccccccccchhhHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHH
Confidence 00 000 0001111111222121 12222222222223233322 344433 1 222234566777
Q ss_pred HHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCC
Q 009914 265 MALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPA 344 (522)
Q Consensus 265 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 344 (522)
...+.++.++++--...+ |+ | ++.+..+...+-+. ...+-.+....++.++.++.++..|+..|..+.
T Consensus 287 ~~~YQ~GVFISRSS~~~~--ri--r-----~lwils~LQ~~nl~--~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV- 354 (402)
T PF02487_consen 287 QLLYQLGVFISRSSLPFF--RI--R-----RLWILSLLQVINLV--FLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV- 354 (402)
T ss_pred HHHHHHHHhhhhcceeee--eh--h-----hHHHHHHHHHHHHH--HHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH-
Confidence 778888888776544332 22 2 12222222221111 111111111123455666788888988888888
Q ss_pred cchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHH
Q 009914 345 TNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGIL 384 (522)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l 384 (522)
.....+.+..|+++|-.++|.......+|..++..++=++
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6777888888999999999999988887777766655443
No 202
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.12 E-value=1.8e-09 Score=108.04 Aligned_cols=142 Identities=15% Similarity=0.151 Sum_probs=104.1
Q ss_pred ccchhHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhH-hhhcCCCchhHHHHHHHHHHHHHHHHHHH
Q 009914 237 GSFPWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF-LSARFPNSGRIILAQISSLSAIPLAALLL 314 (522)
Q Consensus 237 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (522)
....|+...+++.|++ ++|++..+++++...+.....+..+++|+++|| +|||+ .+......... ..+..
T Consensus 27 r~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~-----~~~~g~~~~~~---g~~~~ 98 (489)
T PRK10207 27 RFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKR-----TIVLGAIVLAI---GYFMT 98 (489)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHH-----HHHHHHHHHHH---HHHHH
Confidence 3445677788888886 699999999998888887778888899999999 99994 33332222111 11111
Q ss_pred HhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcc--hhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 315 LVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK--SRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
. .. ......+.+...+.|++.+...+ ...+++.|.+|++ +|++++++.....++|..++|.++|++.++ .||
T Consensus 99 ~-~~--~~~~~ll~~~~~l~~ig~g~~~~-~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~-~gw 172 (489)
T PRK10207 99 G-MS--LLKPDLIFIALGTIAVGNGLFKA-NPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK-FGY 172 (489)
T ss_pred H-Hh--ccchhHHHHHHHHHHhccccccC-CHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh-hCh
Confidence 1 11 11122244566777888888888 7889999999877 457789999999999999999999999998 576
No 203
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.12 E-value=5e-09 Score=102.12 Aligned_cols=175 Identities=11% Similarity=0.051 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFL 87 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~ 87 (522)
.+.+++.++..+.....+...+|.+.++ ..+.........+..+...+..|++|+++||+|+|+++.++.+...++...
T Consensus 254 ~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~ 332 (462)
T PRK15034 254 LWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSAL 332 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 4555556666555555566666666544 223333333345566788889999999999999999999888777666543
Q ss_pred HH-hhh-----hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCC---------------------CchhHHHHHHHHHHH
Q 009914 88 VA-FSS-----TFAQVAISRALNGIGLALVAPAIQSLVADSTDD---------------------SNRGVAFGWLQLTSN 140 (522)
Q Consensus 88 ~~-~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~---------------------~~r~~~~~~~~~~~~ 140 (522)
.. ..+ +++.+.+..+...++.|....+...++.+.+|+ ++-|.+.|+..+...
T Consensus 333 ~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~ 412 (462)
T PRK15034 333 LFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGA 412 (462)
T ss_pred HHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHH
Confidence 22 222 456666665555566666677777888888874 156778899999999
Q ss_pred HHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccC
Q 009914 141 IGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFAN 187 (522)
Q Consensus 141 lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 187 (522)
+|..+-|.+-+...+.. .++...|+...+..+++.++.+....
T Consensus 413 ~Ggf~~p~~~g~~~~~~----g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 413 VGGFFIPQAFGMSLNMT----GSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred cccchhhHHHHHHHHHc----CCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 98888887766666542 56888999999988888888877543
No 204
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.11 E-value=1.8e-09 Score=120.61 Aligned_cols=168 Identities=11% Similarity=0.009 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHH-HHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEV-GAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF 86 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~ 86 (522)
++.+.++.++..+....+...+|.+ .+.+|.++.+.|++.+.+.++.++++++.|+++||.++++.+..+.++.+++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 306 (1140)
T PRK06814 227 IWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGL 306 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHH
Confidence 3344444444444444444445554 456899999999999999999999999999999988877776666666555554
Q ss_pred HHHhh--------------------hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHH
Q 009914 87 LVAFS--------------------STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVG 146 (522)
Q Consensus 87 ~~~~~--------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g 146 (522)
.+.+. ++.+.+++..++.|++.+...+...+++.+.+|++.||+++|..+....+|..++
T Consensus 307 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig 386 (1140)
T PRK06814 307 DLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAG 386 (1140)
T ss_pred HHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHH
Confidence 44432 6677788889999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccccCCCCchHHHHHHHHHHHHHH
Q 009914 147 GLFSVVMAPMTFMGIPGWRISFHIVGLISVVVG 179 (522)
Q Consensus 147 ~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~ 179 (522)
+++.+.+.... .++...|++.+++.++..
T Consensus 387 ~~~~g~l~~~~----~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 387 TIILALLQALG----FSIPWIILFIALANLIVA 415 (1140)
T ss_pred HHHHHHHHHhc----cCHHHHHHHHHHHHHHHH
Confidence 99999887421 566777766655444443
No 205
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.11 E-value=3.5e-09 Score=102.42 Aligned_cols=130 Identities=8% Similarity=-0.011 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHH-HHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 009914 11 VNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRS-IVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVA 89 (522)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~-~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~ 89 (522)
+.+..++............|.+.+++|.++.+.+.+.++.. ++..++.+++|++.||+|+|+.+..+.++.+++..+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~ 293 (356)
T TIGR00901 214 LLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFV 293 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444555666666669999999998887765 57788999999999999999998888888777766555
Q ss_pred hh-----------hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHH
Q 009914 90 FS-----------STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSN 140 (522)
Q Consensus 90 ~~-----------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 140 (522)
+. ++.+.+..+.++.+++.+...+...+++.+.+|+++|++.+++.+...+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 294 WLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 43 3457778888999999999999999999999999999999999887654
No 206
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.11 E-value=3.3e-09 Score=107.09 Aligned_cols=142 Identities=17% Similarity=0.046 Sum_probs=117.1
Q ss_pred HHHHHHHhhhhhhHHH-HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh--
Q 009914 15 GIMERADESLLPGVYK-EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS-- 91 (522)
Q Consensus 15 ~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~-- 91 (522)
.+.............| +++..+|.|+.+.|+......++..++.++.|++.||+|+|+.+..+.++.+++.+++.+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~ 347 (495)
T PRK14995 268 AMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDF 347 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333333333344445 4556689999999999999999999999999999999999999998888888777665443
Q ss_pred -hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 92 -STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 92 -~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
++.+...+..++.|++.+...+.....+.+..|+++++.+.++.+...++|..+|+.+.+.+.+.
T Consensus 348 ~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 348 STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666677889999999999998999999999999999999999999999999999999988653
No 207
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.10 E-value=3.2e-09 Score=107.41 Aligned_cols=145 Identities=12% Similarity=0.134 Sum_probs=119.3
Q ss_pred HHHHHHHHHHhhhhhhHHHHHH-HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHh
Q 009914 12 NLAGIMERADESLLPGVYKEVG-AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAF 90 (522)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~ 90 (522)
.+..+...+........+|.+. +.+|.++.+.|++.....++..++.++.|++.||+|||+.+.++..+.+++..++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~ 340 (485)
T TIGR00711 261 CVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAF 340 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 3444444444444445566554 558999999999999999999999999999999999999999999888888877763
Q ss_pred --h--hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 91 --S--STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 91 --~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
. .+++.+....++.|++.+...+.......+..|+++|+.+.++.+....+|..+|+.+.+.+.+.
T Consensus 341 ~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 341 TFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 35667777788999999998888888888889999999999999999999999999999988764
No 208
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.09 E-value=2.1e-08 Score=98.37 Aligned_cols=135 Identities=13% Similarity=0.081 Sum_probs=94.5
Q ss_pred HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 009914 31 EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLAL 110 (522)
Q Consensus 31 ~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 110 (522)
.+.+++|.++.+.+.+.+...++..++.++.+++.||+|||+.+.++..+..++.++..+.++.+..+..-.+.+.+.+.
T Consensus 229 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 229 LLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSV 308 (392)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999998888888877776655444444444444444
Q ss_pred hHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHH
Q 009914 111 VAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLIS 175 (522)
Q Consensus 111 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~ 175 (522)
..+.. +..+..|.++|+ +.......++..+|+.+++++.+. .|+.....+.+.+.
T Consensus 309 ~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~-----~g~~~~~~~~~~~~ 363 (392)
T PRK10473 309 GFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAV-----LGISAWNMLIGILI 363 (392)
T ss_pred HhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHH-----hccchhHHHHHHHH
Confidence 33332 333344544443 444455567777778888777766 56665455444433
No 209
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.08 E-value=1e-08 Score=89.64 Aligned_cols=151 Identities=16% Similarity=0.140 Sum_probs=113.2
Q ss_pred HHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHH-HHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 009914 30 KEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFL-WAAATFLVAFSSTFAQVAISRALNGIGL 108 (522)
Q Consensus 30 ~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 108 (522)
..+++.+|+|+...+.+.+.-....++.+++.|.++||+|++.+.+.+..+ ..++-....+ +++.=+++..+.|+..
T Consensus 289 ~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsy 366 (459)
T KOG4686|consen 289 MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSY 366 (459)
T ss_pred HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhH
Confidence 367889999999999999999999999999999999999999876655443 3333333333 2333356667888887
Q ss_pred hhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHH-HHHHHHHHHHhhhh
Q 009914 109 ALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHI-VGLISVVVGTLVRL 184 (522)
Q Consensus 109 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~-~~~~~~i~~~~~~~ 184 (522)
+..-.....+++...|+++.|++.+..+...++|..+-|++++++.+.. +.+.|--+|++ .+.+++....+.+.
T Consensus 367 sllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~--g~y~~le~ffl~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 367 SLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGD--GSYDNLEAFFLIIGLMALTSVGILFY 441 (459)
T ss_pred HHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCC--CchhhHHHHHHHHHHHHHHHHHHHhh
Confidence 7777777888899999999999999999999999999999999998763 11345444444 44444444444333
No 210
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.08 E-value=1.3e-08 Score=98.26 Aligned_cols=169 Identities=15% Similarity=0.076 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhch---hHHHH-HHHHHHH
Q 009914 7 TLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNR---AHVIA-LGAFLWA 82 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~gr---r~~l~-~~~~~~~ 82 (522)
.++.+.+.+++.......+...+|.+.++.|.+.. .+...++..+...++ .++++||..| |+... ...++.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a 268 (368)
T TIGR00903 193 DLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIA 268 (368)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHH
Confidence 34555556666666666666778888788888764 566655555555544 4677777654 33323 2344444
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 009914 83 AATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIP 162 (522)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~ 162 (522)
+...+.++..+....++.-.+.+++.....+...++.+|.+|++.|++++|+.+....+|.+++|++.+.+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~------- 341 (368)
T TIGR00903 269 AFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS------- 341 (368)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-------
Confidence 4444444444444445555667777777777788999999999999999999999999999999999887762
Q ss_pred CchHHHHHHHHHHHHHHHhhhhcc
Q 009914 163 GWRISFHIVGLISVVVGTLVRLFA 186 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~~~~~ 186 (522)
+.+..|.+.++..++..+....++
T Consensus 342 ~~~~~f~~~~~~~~i~~~~~~~~~ 365 (368)
T TIGR00903 342 SAEAYFTFLAILITIAFAIALLLP 365 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCC
Confidence 567778888887777776664333
No 211
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.08 E-value=2.7e-09 Score=104.07 Aligned_cols=133 Identities=17% Similarity=0.228 Sum_probs=102.5
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 009914 245 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 324 (522)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (522)
..+|.+.+++|.+..+.+++.+...++..++.++.|++.||++||+ .+.... .+..+...... . .++.
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-----~~~~~~-~~~~i~~~~~~-~-----~~~~ 79 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKP-----VILGGT-LVFALAAVACA-L-----AQTI 79 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChH-----HHHHHH-HHHHHHHHHHH-H-----HccH
Confidence 4577888889999999999999999999999999999999999873 332221 11111111111 1 1233
Q ss_pred HHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 325 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
+.+.+..++.|++.+...+ ...+++.|.+|+++|+++.++.+....++..++|.+.+.+.+. .+|
T Consensus 80 ~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~ 144 (377)
T PRK11102 80 DQLIYMRFLHGLAAAAASV-VINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-FSW 144 (377)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCh
Confidence 4456677788888887777 7788999999999999999999999999999999999999887 565
No 212
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.07 E-value=3.7e-10 Score=109.01 Aligned_cols=135 Identities=20% Similarity=0.303 Sum_probs=103.3
Q ss_pred HHHHH-HHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 009914 244 LSFAA-MWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS 322 (522)
Q Consensus 244 ~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (522)
....| .+.+++|.+..+.+++.+...++..++.++.|+++||+|+|+ .+.... .+.++. ..+..+. .+
T Consensus 16 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-----~l~~~~-~~~~~~-~~~~~~~----~~ 84 (352)
T PF07690_consen 16 SPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR-----VLIIGL-LLFALG-SLLLAFA----SN 84 (352)
T ss_dssp HHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH-----HHHHHH-HHHHHH-HHHHHHH----CC
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee-----eEeehh-hhhhhH-HHHhhhh----hh
Confidence 34566 444579999999999999999999999999999999999983 222222 122111 1111111 33
Q ss_pred hhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcc
Q 009914 323 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 323 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~ 392 (522)
.+ .+.+..++.|++.+...+ ....++.|.+|+++|++++++.+....++..++|.+++.+.+. .+|+
T Consensus 85 ~~-~~~~~~~l~g~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~~~~ 151 (352)
T PF07690_consen 85 FW-LLLIARFLLGIGSGFFSP-ASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY-FGWR 151 (352)
T ss_dssp HH-HHHHHHHHHHHHHHHHHH-HHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-CHHC
T ss_pred HH-HHhhhccccccccccccc-cccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc-cccc
Confidence 34 677888899999888888 8899999999999999999999999999999999999999866 5553
No 213
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.06 E-value=3.8e-09 Score=103.02 Aligned_cols=156 Identities=12% Similarity=0.035 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHH-HHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhch-hHH-HHHHH-HHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKE-VGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNR-AHV-IALGA-FLWAA 83 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~gr-r~~-l~~~~-~~~~~ 83 (522)
+..+.+..+.............|. +.+.+|.++.+.+++.+...++..++.++.|++.||..+ |+. +.... ....+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~ 297 (379)
T TIGR00881 218 LWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIV 297 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHH
Confidence 344445555555444445555555 456789999999999999999999999999999998643 332 22222 22222
Q ss_pred HHHHHHh--hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 009914 84 ATFLVAF--SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGI 161 (522)
Q Consensus 84 ~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~ 161 (522)
+...... ..+....++..++.|+......+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~----- 372 (379)
T TIGR00881 298 SLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG----- 372 (379)
T ss_pred HHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh-----
Confidence 2222222 234555566667777766666666678889999999999999999999999999999999999988
Q ss_pred CCchHHH
Q 009914 162 PGWRISF 168 (522)
Q Consensus 162 ~gw~~~f 168 (522)
.||+..|
T Consensus 373 ~g~~~~f 379 (379)
T TIGR00881 373 FGWAGAF 379 (379)
T ss_pred hcccccC
Confidence 8888754
No 214
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.06 E-value=1.5e-08 Score=101.87 Aligned_cols=178 Identities=17% Similarity=0.140 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHH-HHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHH--------HHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEV-GAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHV--------IAL 76 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~--------l~~ 76 (522)
+.++.+.+..+........+...+|.+ .+.+|.+..+.|++.++..++..++.++.|+++||+++|+. +..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 340 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFN 340 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 345566666666666666666667755 56689999999999999999999999999999999875421 111
Q ss_pred HHHHHHHHHHH--HHh-hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 77 GAFLWAAATFL--VAF-SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 77 ~~~~~~~~~~~--~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
+......+..+ ... ..+....++.-.+.+.+.+...+.......+..|+ .++..+++.+....+|..++|.+.+.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~ 419 (465)
T TIGR00894 341 GIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNI 419 (465)
T ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 11111111111 112 22344444445555555555555555566676654 799999999999999999999999988
Q ss_pred hcccccCCCCchHHHHHHHHHHHHHHHhhhhcc
Q 009914 154 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFA 186 (522)
Q Consensus 154 ~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 186 (522)
.+.. ...+|+..|.+.++..++..++..++.
T Consensus 420 ~~~~--~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 420 LSQD--SKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred eCCC--CchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 7641 113489999999888877776665544
No 215
>PRK10133 L-fucose transporter; Provisional
Probab=99.05 E-value=2e-08 Score=99.48 Aligned_cols=142 Identities=14% Similarity=0.044 Sum_probs=113.4
Q ss_pred HHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhH
Q 009914 33 GAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVA 112 (522)
Q Consensus 33 ~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 112 (522)
.+.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++..+.++.. .+..-++.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999888877777766666655542 3456678999999999
Q ss_pred HHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC-chHHHHHHHHHHHHHHHhh
Q 009914 113 PAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPG-WRISFHIVGLISVVVGTLV 182 (522)
Q Consensus 113 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~g-w~~~f~~~~~~~~i~~~~~ 182 (522)
|...+...+..++ +.+.+.++... ..+|..++|.+.+.+.+. .| -+..|++..+..+....+.
T Consensus 366 P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~-----~g~~~~~~~v~~~~~~~~~~~~ 429 (438)
T PRK10133 366 PTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDA-----AGNIPTAELIPALCFAVIFIFA 429 (438)
T ss_pred HHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHH
Confidence 9999999998765 35677777764 446788888888888876 66 7888887666555544443
No 216
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.03 E-value=2.1e-08 Score=86.89 Aligned_cols=332 Identities=14% Similarity=0.169 Sum_probs=183.4
Q ss_pred HHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhH
Q 009914 15 GIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTF 94 (522)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~ 94 (522)
+++...+....+|.+-++-+.+|....++|.+..+..-..++...+.|.++|+-|||+..+.-++.+.++++ .-.++.+
T Consensus 46 yslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqY 124 (454)
T KOG4332|consen 46 YSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQY 124 (454)
T ss_pred HHHHHhhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCce
Confidence 334444445556655566677888999999999888888899999999999999999986665555554443 3456789
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHH-hhccCCCchhHHHHHHH--------HHHHHHHHHHHHHHHhhhcccccCCCCch
Q 009914 95 AQVAISRALNGIGLALVAPAIQSLV-ADSTDDSNRGVAFGWLQ--------LTSNIGSLVGGLFSVVMAPMTFMGIPGWR 165 (522)
Q Consensus 95 ~~l~~~r~l~G~~~~~~~~~~~~~i-~~~~~~~~r~~~~~~~~--------~~~~lg~~~g~~l~~~l~~~~~~~~~gw~ 165 (522)
-.++++|++-|+..+..+.+..++. .|.-+ +|+.---+.. .+..+-.+++.+.+..+.+... .|--
T Consensus 125 kVLmVGR~LGGiaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~s---lGPV 199 (454)
T KOG4332|consen 125 KVLMVGRVLGGIATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFS---LGPV 199 (454)
T ss_pred EEEeehhhhhhHHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhc---cCCC
Confidence 9999999999999999998887765 45442 2332222211 2233334444455555554311 3555
Q ss_pred HHHHHHHHHHHHHHHhhhh-ccCCCCCCCCCCCCCcccccchhhhhhHHHHHHhhhhhcchhHHHH-HHHhhhccchhH-
Q 009914 166 ISFHIVGLISVVVGTLVRL-FANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQII-VAQGVTGSFPWS- 242 (522)
Q Consensus 166 ~~f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~- 242 (522)
.+|-..+.+..+...+... .-++-. .+.++ +... +......+.+..++.+.++ .+...+-...|.
T Consensus 200 APFdAAacfLaigmAvil~~W~ENyg-dps~~--------kdll---tqf~gaa~aiaSD~ki~LLG~iqsLFE~smytF 267 (454)
T KOG4332|consen 200 APFDAAACFLAIGMAVILSSWSENYG-DPSEN--------KDLL---TQFKGAARAIASDEKIALLGAIQSLFEGSMYTF 267 (454)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhccC-Chhhh--------HHHH---HHhhHhHHHHhcchHHHHHHHHHHHHhhhhhee
Confidence 6666554443333332222 111111 11110 0000 1111122233444444333 333333332222
Q ss_pred HHHHHHHHH-HHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 009914 243 ALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDP 321 (522)
Q Consensus 243 ~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (522)
.+.|.|..- ++.+.+ -|++++.+.++.++|+-+..++..|-..|-. ..+.+............+.........
T Consensus 268 VFLWTPaLspn~e~iP---hGfiFatFMlASmLGSSla~Rl~s~s~~~ve---~ymqivf~vs~a~l~Lpilt~~vsP~k 341 (454)
T KOG4332|consen 268 VFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLLSRSSPKVE---SYMQIVFLVSIAALLLPILTSSVSPSK 341 (454)
T ss_pred eeeecccCCCCcccCC---chhHHHHHHHHHHHhhHHHHHHHhcCCcccc---hHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 223444432 122332 3678888888888888888777665443321 222222222221111111111111122
Q ss_pred chhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHH
Q 009914 322 STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFES 371 (522)
Q Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (522)
..+..-.+.++++-.+.|...| .++-+-.+..|.+.|++.+-.+..--+
T Consensus 342 es~~~s~i~F~~~E~cvGlfwP-SimkmRsqyIPEearstimNfFRvPLn 390 (454)
T KOG4332|consen 342 ESPSESLIGFCLFEACVGLFWP-SIMKMRSQYIPEEARSTIMNFFRVPLN 390 (454)
T ss_pred CCchHHHHHHHHHHHHHhhcch-HHHHHHHhhCCHHHHhhhhhheechhh
Confidence 3334445666777778888888 788888899999999887666554333
No 217
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.02 E-value=1.5e-08 Score=99.39 Aligned_cols=133 Identities=16% Similarity=0.181 Sum_probs=98.5
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 009914 245 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 324 (522)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (522)
..+|.+.+++|.|+.+.++..+...++..++.++.|+++||+|||+ .+..... ...+ ....... .++.
T Consensus 29 p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~-----~~~~~~~-~~~~--~~~~~~~----~~~~ 96 (394)
T PRK11652 29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRP-----VILVGMS-IFIL--GTLVALF----AHSL 96 (394)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH-----HHHHHHH-HHHH--HHHHHHH----HccH
Confidence 3467778889999999999999999999999999999999999984 3332211 1111 1111111 1233
Q ss_pred HHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 325 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
+.+.+..++.|++.+...+ ....+..|..++++++.+.+..+....++..++|.+.+.+.+. .||
T Consensus 97 ~~l~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-~g~ 161 (394)
T PRK11652 97 TVLIAASAIQGLGTGVGGV-MARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL-FGW 161 (394)
T ss_pred HHHHHHHHHHHhhhhHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCh
Confidence 4455666777877766555 5667788888889999999999999999999999999998876 565
No 218
>PRK09848 glucuronide transporter; Provisional
Probab=99.02 E-value=3e-08 Score=99.07 Aligned_cols=149 Identities=13% Similarity=0.205 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHH-HHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEV-GAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF 86 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~ 86 (522)
+....+..++............|.+ .+.+|.++...++......++..++.++++++.||+|+|+++.++.++.+++.+
T Consensus 230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~ 309 (448)
T PRK09848 230 LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYL 309 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3444444444444444444455544 345676665555555555677888999999999999999999999988888877
Q ss_pred HHHhhh--hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCC-------chhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 87 LVAFSS--TFAQVAISRALNGIGLALVAPAIQSLVADSTDDS-------NRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 87 ~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
++.+.+ +++.+++..++.|+|.+...+...++.+|..|.+ ++|..++..+....+|..+|+.+.+.+.+.
T Consensus 310 ~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 310 LFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776654 5677777788999999999999999999988654 358899999999999999999999887654
No 219
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.01 E-value=1e-08 Score=96.02 Aligned_cols=148 Identities=14% Similarity=0.122 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH----hchhHH-HHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR----HNRAHV-IALGAFL 80 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr----~grr~~-l~~~~~~ 80 (522)
+.++.++...+-..+.+..-....+++.+++|++....+.+-.+..+...+.+|+.|..+|| |||||. +..+...
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 44555555555556666666667778888899999999999999999999999999999995 888877 6666677
Q ss_pred HHHHHHHHHhhhhHHH-----------------HHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhH-HHHHHHHHHHHH
Q 009914 81 WAAATFLVAFSSTFAQ-----------------VAISRALNGIGLALVAPAIQSLVADSTDDSNRGV-AFGWLQLTSNIG 142 (522)
Q Consensus 81 ~~~~~~~~~~~~~~~~-----------------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~lg 142 (522)
..++.++..++.++.. ++++--+.=++.-....++.+++.|...++++.+ +++++..+.++|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 7788888887755433 2334444445666778889999999997666555 999999999999
Q ss_pred HHHHHHHHHhh
Q 009914 143 SLVGGLFSVVM 153 (522)
Q Consensus 143 ~~~g~~l~~~l 153 (522)
.++|..++++.
T Consensus 192 nvLGY~~g~y~ 202 (498)
T KOG0637|consen 192 NVLGYALGSYL 202 (498)
T ss_pred ceeeeeccccc
Confidence 99999888744
No 220
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.01 E-value=1.4e-08 Score=99.67 Aligned_cols=133 Identities=16% Similarity=0.111 Sum_probs=101.8
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 009914 245 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 324 (522)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (522)
...|.+.+++|.+..+.|++.+...++.+++++..|++.||+|+|+ .+..... +.++ ......... ..++.
T Consensus 24 ~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~-----~~~~g~~-l~~~--g~~l~~~~~-~~~~~ 94 (410)
T TIGR00885 24 PMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKA-----GILLGLF-LYAL--GAFLFWPAA-EIMNY 94 (410)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH-----HHHHHHH-HHHH--HHHHHHHHH-hhccH
Confidence 5677777789999999999999999999999999999999999984 3222221 1111 111111111 12344
Q ss_pred HHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 325 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
+.+.+..++.|++.+...+ ....++.+..|++++++..++.+...++|..++|.+.+.+...
T Consensus 95 ~~~l~~~~l~G~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 95 TLFLVGLFILTAGLGFLET-AANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHHHHHHHhhHHHHHh-hhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5566777888999888887 7788888999999999999999999999999999999988754
No 221
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.00 E-value=6e-08 Score=94.29 Aligned_cols=180 Identities=13% Similarity=0.031 Sum_probs=136.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAA 84 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~ 84 (522)
+.....+.+.......+.+........+.++-|++..+.-++.....+...+..+++..+.||+|||+.++.+..++.+.
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 33344444444445555566677777888899999999999999999999999999999999999999999999998888
Q ss_pred HHHHHhhh---hHH------HHHHHHHHHHHHhhh-hHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009914 85 TFLVAFSS---TFA------QVAISRALNGIGLAL-VAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMA 154 (522)
Q Consensus 85 ~~~~~~~~---~~~------~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~ 154 (522)
.+++.... +.. ..+++.++..++.+. ..|...-+.+|.+|++.|..++++......+...+-...-..+.
T Consensus 349 ~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~ 428 (485)
T KOG0569|consen 349 LLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQ 428 (485)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87776542 111 123444444444443 36677889999999999999999999999888887777777776
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCC
Q 009914 155 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPH 190 (522)
Q Consensus 155 ~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~ 190 (522)
+. .|- +.|++..+.+++..+..++..+|.+
T Consensus 429 ~~-----~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 429 NV-----IGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HH-----hcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 65 554 7888888888888888888665543
No 222
>PRK11043 putative transporter; Provisional
Probab=99.00 E-value=9.7e-08 Score=93.99 Aligned_cols=131 Identities=8% Similarity=0.007 Sum_probs=101.5
Q ss_pred hhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHH---Hh--hhhHHHHHH
Q 009914 25 LPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLV---AF--SSTFAQVAI 99 (522)
Q Consensus 25 ~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~---~~--~~~~~~l~~ 99 (522)
+....|.+.+++|.++.+.|+......++..++.++.+++.||+|+|+.+.......+++.+.. .. .++.+.+++
T Consensus 222 ~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (401)
T PRK11043 222 WLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLI 301 (401)
T ss_pred HHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 3345677778899999999998888888999999999999999999987665555444443322 22 245555666
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 100 SRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 100 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
...+.|++.+...+...+...+..| +++++++++.+.....+...++.+.+.+.+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 302 PFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 6778888889999988888877765 5799999999998888888888888888654
No 223
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.98 E-value=1.8e-08 Score=99.17 Aligned_cols=131 Identities=11% Similarity=0.075 Sum_probs=97.8
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHH
Q 009914 247 AAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVM 326 (522)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (522)
+|.+.++++.+..+.++..+++.++..++.++.|+++||+|||+ .+..... +..+ ..+... . .++.+.
T Consensus 39 l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~-----~l~~~~~-~~~~--~~~~~~-~---a~~~~~ 106 (413)
T PRK15403 39 IINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRP-----VLITGAL-IFTL--ACAATL-F---TTSMTQ 106 (413)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchH-----HHHHHHH-HHHH--HHHHHH-H---cCCHHH
Confidence 45555789999999999999999999999999999999999994 3332211 1111 111111 1 133444
Q ss_pred HHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 327 HGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 327 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
+.+.-++.|++.+...+ ....++.|.+|++++++.+++.+....++..++|.+++.+.+. .||
T Consensus 107 l~~~r~l~Gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-~gw 169 (413)
T PRK15403 107 FLIARFIQGTSICFIAT-VGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-VHW 169 (413)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCH
Confidence 56667778887765555 5667888999999999999999999999999999999998877 565
No 224
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.97 E-value=2.3e-08 Score=99.17 Aligned_cols=151 Identities=18% Similarity=0.153 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~ 85 (522)
+.+..+....++............+++.++.--++...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~ 304 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGF 304 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHH
Confidence 44556666677777777777767777666543344678888899999999999999999999999999999999999999
Q ss_pred HHHHhhh--hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCC-------CchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 86 FLVAFSS--TFAQVAISRALNGIGLALVAPAIQSLVADSTDD-------SNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 86 ~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
++..+.+ +.+.+++..++.|++.+...+...++++|..+. ++.|..+|.......+|..+++.+.+.+.+.
T Consensus 305 ~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 305 LLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred HHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9988886 899999999999999999999999999998873 3458889999999999999999998887754
No 225
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.96 E-value=5.4e-08 Score=91.98 Aligned_cols=165 Identities=24% Similarity=0.353 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhcCCCh--hhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHH
Q 009914 11 VNLAGIMERADESLLPGVYKEVGAALHTDP--TGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLV 88 (522)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~--~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~ 88 (522)
.....+.............+.+..+++.+. .+.++..+.+.+...++.++.|.+.||+|||+.+..+.....++.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 86 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLL 86 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHH
Confidence 344445555666777788888888888777 588999999999999999999999999999988888887666666677
Q ss_pred Hhhhh--HHHHHHHHHHHHHHhhhhHHHHHHHHhhccCC-CchhHHHHHHHH-HHHHHHHHHHHHHHhhhcccccCCCCc
Q 009914 89 AFSST--FAQVAISRALNGIGLALVAPAIQSLVADSTDD-SNRGVAFGWLQL-TSNIGSLVGGLFSVVMAPMTFMGIPGW 164 (522)
Q Consensus 89 ~~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~lg~~~g~~l~~~l~~~~~~~~~gw 164 (522)
.+..+ .+.+++.|+++|++.+...+...+++.++.|+ ++|+...+.... ...+|.++++.+++.+... ...+|
T Consensus 87 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 163 (338)
T COG0477 87 ALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA---LLWGW 163 (338)
T ss_pred HhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhcch
Confidence 77766 88999999999999999999999999999987 678999999888 5888999999887777653 33689
Q ss_pred hHHHHHHHHHHHHH
Q 009914 165 RISFHIVGLISVVV 178 (522)
Q Consensus 165 ~~~f~~~~~~~~i~ 178 (522)
|..|.+........
T Consensus 164 ~~~~~~~~~~~~~~ 177 (338)
T COG0477 164 RAAFLLAALLGLLL 177 (338)
T ss_pred HHHHHHHHHHHHHH
Confidence 99777776655444
No 226
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.95 E-value=2.7e-08 Score=96.62 Aligned_cols=134 Identities=16% Similarity=0.147 Sum_probs=95.9
Q ss_pred hHHHHHHHHHH-HHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCC
Q 009914 241 WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPD 319 (522)
Q Consensus 241 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (522)
+....+.|.++ +++|+|..+.+++.+...++.+++.++.|+++||+|+|+ .+.... .+..+......+
T Consensus 18 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-----~~~~~~-~~~~i~~~~~~~----- 86 (366)
T TIGR00886 18 FAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRY-----TTTLSL-LLLAIPCLWAGL----- 86 (366)
T ss_pred HHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchH-----HHHHHH-HHHHHHHHHHHH-----
Confidence 34446678644 679999999999999999999999999999999999984 322221 111111111111
Q ss_pred CCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 320 DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 320 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
.+.+.+.+.+..++.|++.+.. + ....++.+.+|+++|+++.++.....++|..+++.+.+.+...
T Consensus 87 ~~~~~~~~~~~~~~~g~~~~~~-~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 152 (366)
T TIGR00886 87 AVQSYSVLLLLRLFIGIAGGSF-A-SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGS 152 (366)
T ss_pred HhhhHHHHHHHHHHHHHhchhh-H-hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 1103444556667778775543 4 4678899999999999999999988888988888888777664
No 227
>PTZ00207 hypothetical protein; Provisional
Probab=98.93 E-value=4.6e-08 Score=98.26 Aligned_cols=136 Identities=10% Similarity=0.012 Sum_probs=88.1
Q ss_pred hHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009914 241 WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 320 (522)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (522)
|....+.|.+.+++|++..+.+.+....... ....++.|++.||+|+|+ .+.... ....+......+......
T Consensus 44 y~fsv~s~~L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R~-----vllig~-ll~~iG~ll~ala~~~~i 116 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPRP-----IFVLSM-TVFCLGTLLFALTFQEVI 116 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcHH-----HHHHHH-HHHHHHHHHHHHHhcccc
Confidence 4444566766678999999999888764333 345667899999999984 332221 111111111111101111
Q ss_pred CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHH
Q 009914 321 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 385 (522)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~ 385 (522)
..+.+.+.+..++.|++.+...+ .....+.+.+| ++||++.|+......+|+++.+.+...+.
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~-~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDL-GAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23455566777788888877766 56677788887 78999999999999999987555544444
No 228
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.92 E-value=4e-07 Score=86.76 Aligned_cols=372 Identities=14% Similarity=0.072 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHh--cCCChhhhHHHHHHHHHHHHhhhhhHHHHHH-----HhchhHHHHH-HHHH
Q 009914 9 VLVNLAGIMERADESLLPGVYKEVGAA--LHTDPTGLGSLTLFRSIVQASCYPIAAYLAI-----RHNRAHVIAL-GAFL 80 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~D-----r~grr~~l~~-~~~~ 80 (522)
.++.+.+++++.-.+.....+|.+.++ -+.|.+|.|... .....+. ..++|.++.| |+||||.-++ .-.+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fS-la~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l 80 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFS-LASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYL 80 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeee-eeechhH-HHHhhhhhhhhhcccccCCcchhhhHHHHH
Confidence 456677788887777765677888888 788999987543 2233333 3566777776 7899987443 3333
Q ss_pred HHHHHHHHHhhh----------------------hH--HHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHH
Q 009914 81 WAAATFLVAFSS----------------------TF--AQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQ 136 (522)
Q Consensus 81 ~~~~~~~~~~~~----------------------~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 136 (522)
.++..+..+..- +. ..+...-++.-+-.+--..+...+.-....+++++.+..-..
T Consensus 81 ~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqt 160 (544)
T PF13000_consen 81 SGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQT 160 (544)
T ss_pred HHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHH
Confidence 333333322211 01 112222222223334445555666666777788888777777
Q ss_pred HHHHHHHHHHHHHHHhhhccc-----------ccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCC----C--C--C
Q 009914 137 LTSNIGSLVGGLFSVVMAPMT-----------FMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDG----G--T--A 197 (522)
Q Consensus 137 ~~~~lg~~~g~~l~~~l~~~~-----------~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~----~--~--~ 197 (522)
.+.+.|..++..+--.+.+.+ ..+...-..-..+.|...++..++..++.+|++.... + + +
T Consensus 161 vG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~ 240 (544)
T PF13000_consen 161 VGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSD 240 (544)
T ss_pred hHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCcccccccccc
Confidence 777777777665544443211 0011111222334455556666666666555322111 0 0 0
Q ss_pred --CCc-----ccc---cchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchhHHH-HHHHHHHHHhCCChhHHHHHHH
Q 009914 198 --NSD-----QVS---SKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLMA 266 (522)
Q Consensus 198 --~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~ 266 (522)
.++ .+. ......++++..+...+++|.|....+++..+..-..+... .....=+-+.|++.++.+.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEkG~~KE~LAl~~l 320 (544)
T PF13000_consen 241 GKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEKGLSKEDLALLVL 320 (544)
T ss_pred ccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHcCCCHHHhHHHHH
Confidence 000 000 12223456677777778888888887766665555544322 3344445589999998776665
Q ss_pred HHHHHHhccchhhhhhhhHhhhcCC-Cc---------------h----------hHHHHHH-HHHHHHHHHHHHHHhCCC
Q 009914 267 LFVIASSLGGLFGGRMGDFLSARFP-NS---------------G----------RIILAQI-SSLSAIPLAALLLLVLPD 319 (522)
Q Consensus 267 ~~~~~~~~~~~~~g~l~~~~~~~~~-~~---------------~----------~~~~~~~-~~~~~~~~~~~~~~~~~~ 319 (522)
+. +...++.|+++.|+.+.++ .. . +..+... .-+....+.......++.
T Consensus 321 i~----~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~ 396 (544)
T PF13000_consen 321 ID----FPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPS 396 (544)
T ss_pred Hh----hhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCC
Confidence 44 3344444454444433221 00 0 1111111 011111111111122331
Q ss_pred CCch----hHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 320 DPST----PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 320 ~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
.... ..++++..++..+..-..+. ...+.-+++.+|..-|+.+-+.|++.++|+-.-..+.=++.|.
T Consensus 397 ~g~v~~~Yf~lvI~~~~l~sf~stvmFV-ai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 397 DGPVPTYYFLLVIIQHVLSSFMSTVMFV-AIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 1111 11122222333344444444 5677888899999999999999999999999999898889988
No 229
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.91 E-value=1.3e-08 Score=92.50 Aligned_cols=135 Identities=14% Similarity=0.154 Sum_probs=103.4
Q ss_pred HHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchh
Q 009914 50 RSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRG 129 (522)
Q Consensus 50 ~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 129 (522)
..+.-..+.++.+.+.||+|||+.|....+++++..++.....+-..+.+..+..-++.+..+.+.+.|..|.+|..-|+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 34555678889999999999999999999999998888776654333322222333334444556678999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCC
Q 009914 130 VAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHF 191 (522)
Q Consensus 130 ~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~ 191 (522)
...|.-.....+|.++.|+++ ...+ ..-..+..+.+.+.++..+...++|-+++-
T Consensus 470 tgvGtcSsmaRIggI~~p~iA-~~~e------~s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA-MRAE------LSTSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH-HHhc------cceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 999999999999999999999 3333 345567778888888899998898877653
No 230
>PRK09669 putative symporter YagG; Provisional
Probab=98.90 E-value=1.2e-07 Score=94.64 Aligned_cols=146 Identities=13% Similarity=0.054 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHh
Q 009914 11 VNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAF 90 (522)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~ 90 (522)
+....++............+++.++.-.++...+.+.....+...++.+++++++||+|+|+.+..+.++.++..+...+
T Consensus 234 l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~ 313 (444)
T PRK09669 234 MFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFF 313 (444)
T ss_pred HHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 33344433333333344444444433223444455666777888888999999999999999988887766654443333
Q ss_pred --hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCC-------CchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 91 --SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDD-------SNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 91 --~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
.++.+.+++..++.|++.+...+...++++|..+. ++.+..++.......+|..+|+.+++.+.+.
T Consensus 314 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 314 IPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred hCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24677778888999999999999999999998852 2346678889999999999999999998765
No 231
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.89 E-value=1.9e-07 Score=85.27 Aligned_cols=172 Identities=15% Similarity=0.104 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHh-chhHHHHHHHHHHHHHHHHH
Q 009914 10 LVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRH-NRAHVIALGAFLWAAATFLV 88 (522)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-grr~~l~~~~~~~~~~~~~~ 88 (522)
.+.+-+-+..+..++....+|.+..|.|+|..+.|++.+...+.....++..-.+++|. ++|+..+....++.++...+
T Consensus 212 ~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~ 291 (395)
T COG2807 212 QVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGL 291 (395)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 33444444555566777788999999999999999999999999999999999999975 46777777777888888877
Q ss_pred HhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCC-CchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHH
Q 009914 89 AFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDD-SNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRIS 167 (522)
Q Consensus 89 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~ 167 (522)
.+.|.-..+.- .++.|+|.|..++.+..++.+..++ ++-++..++.+....+=..+||.+.|++.+.. .+|+.+
T Consensus 292 ~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~----gsw~~~ 366 (395)
T COG2807 292 LLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT----GSWSAP 366 (395)
T ss_pred HHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc----CChHHH
Confidence 77765433333 4899999999999999999988754 45566677777777777788999999998864 789999
Q ss_pred HHHHHHHHHHHHHhhhhcc
Q 009914 168 FHIVGLISVVVGTLVRLFA 186 (522)
Q Consensus 168 f~~~~~~~~i~~~~~~~~~ 186 (522)
+...+...++..+..+..-
T Consensus 367 ~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 367 LVLLALATLLMLIFGLRAG 385 (395)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 9998888888777766644
No 232
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.88 E-value=2.8e-08 Score=94.92 Aligned_cols=168 Identities=20% Similarity=0.133 Sum_probs=145.2
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh
Q 009914 12 NLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS 91 (522)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~ 91 (522)
.+...+.+........++-.-.++++..++..|........+-++.-++.+++..|+|+-+++..++.+.++=.+.....
T Consensus 377 f~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L 456 (618)
T KOG3762|consen 377 FFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL 456 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh
Confidence 33444445555555555566678888888889988888888888899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHH-HHHHHHHHHHHHHHhhhcccccCCCCchHHHHH
Q 009914 92 STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQL-TSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHI 170 (522)
Q Consensus 92 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~ 170 (522)
.|.|..+...+++|+..+..+.+..+++++..||+.|+.+.++++. ..++|--+|.++||.+.+. ++-|..|.+
T Consensus 457 ~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~-----fg~~ttf~~ 531 (618)
T KOG3762|consen 457 QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER-----FGARTTFRI 531 (618)
T ss_pred cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee-----ehhHHHHHH
Confidence 9999999999999999999999999999999999999999999775 5689999999999999998 899999999
Q ss_pred HHHHHHHHHHhhhh
Q 009914 171 VGLISVVVGTLVRL 184 (522)
Q Consensus 171 ~~~~~~i~~~~~~~ 184 (522)
.++.+++..++...
T Consensus 532 ~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 532 FGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHHHHHH
Confidence 99888877666544
No 233
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.86 E-value=1.7e-07 Score=90.05 Aligned_cols=130 Identities=14% Similarity=0.087 Sum_probs=99.6
Q ss_pred HHHHHHHhCCChhH-HHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhH
Q 009914 247 AAMWLELTGFSHEK-TAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 325 (522)
Q Consensus 247 ~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (522)
.|.+.+++|++..+ .|.+...+..+..+..+..|+++||+|.|+ .+..... .-++......+ .....
T Consensus 49 ~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~-----vL~l~~l-~Wsl~t~L~~f------a~Sl~ 116 (511)
T TIGR00806 49 TPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKP-----VLVLQAL-SFVCVWLLLLL------GTSVW 116 (511)
T ss_pred HHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchH-----HHHHHHH-HHHHHHHHHHH------HHHHH
Confidence 45555689999999 999999999999999999999999999984 3222221 11111111111 13355
Q ss_pred HHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcc
Q 009914 326 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 326 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~ 392 (522)
.+.+.-++.|++.+.... ...++...+|+++|+++.|+.+....+|.++++++++++ .. +||.
T Consensus 117 ~L~i~R~llGvaEA~~~A--~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s-~gWr 179 (511)
T TIGR00806 117 HMQLMEVFYSVTMAARIA--YSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VT-LGWI 179 (511)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-cCch
Confidence 577788899999887774 889999999999999999999999999999999999994 34 4653
No 234
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.83 E-value=3.5e-08 Score=98.51 Aligned_cols=123 Identities=13% Similarity=0.089 Sum_probs=108.8
Q ss_pred HhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHH
Q 009914 34 AALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS----------STFAQVAISRAL 103 (522)
Q Consensus 34 ~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~l 103 (522)
+.+|.++.+.|++.....++.+++....+++.+|++.|+++.++.++.+++.+..... ++.+.++...++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 5689999999999999999999999999999999999999999999988877554311 333455666788
Q ss_pred HHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 104 NGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 104 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
.+++.+....+...++.+..|+++++...++.....++|..+++.+++.+.+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~ 413 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET 413 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876
No 235
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.83 E-value=1e-07 Score=95.65 Aligned_cols=151 Identities=14% Similarity=0.058 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~ 85 (522)
+.+..+....++............+++.+....+....+++.+...++..++.+++++++||+|+|+.+.++..+.+++.
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~ 310 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSC 310 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 33444444455555555555555566655554466677778887778899999999999999999999988887766665
Q ss_pred HHHHh-----hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 86 FLVAF-----SSTFAQVAISRALNGIGLALVAPAIQSLVADSTD-------DSNRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 86 ~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
+...+ ..+.+.+++.-++.|++.+...+...++++|..| +++.|..++......-+|..+++.+.+++
T Consensus 311 ~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 311 GVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55432 2356677777888999999999999999999865 23346688999999999999999999988
Q ss_pred hcc
Q 009914 154 APM 156 (522)
Q Consensus 154 ~~~ 156 (522)
.+.
T Consensus 391 l~~ 393 (473)
T PRK10429 391 LGL 393 (473)
T ss_pred HHH
Confidence 754
No 236
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.79 E-value=7.1e-08 Score=94.83 Aligned_cols=136 Identities=13% Similarity=0.087 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhh----HhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhC-
Q 009914 243 ALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGD----FLSARFPNSGRIILAQISSLSAIPLAALLLLVL- 317 (522)
Q Consensus 243 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 317 (522)
...+++.|++++|.+....+.+.....+.+++..++.|+++| |+|||++ .+........+.+..+.+...
T Consensus 23 ~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp-----~il~g~~~~~~~l~ll~~~~~~ 97 (477)
T TIGR01301 23 QLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP-----FIAAGAALVAFAVILIGFAADI 97 (477)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH-----HHHHHHHHHHHHHHHHHhCchh
Confidence 345778889999999999999999999999999999999999 4898853 222212222111111111000
Q ss_pred ----C----CCCchh--HHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchh--HHHHHHHHHHHHHHhchhhHHHHHH
Q 009914 318 ----P----DDPSTP--VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSR--TSVYAMDRSFESILSSFAPPVVGIL 384 (522)
Q Consensus 318 ----~----~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~i~~~~~g~l 384 (522)
. ...... +...+.+.+..++.....+ ...+++.|.+|+++| +.++++.+...++|+.+++.+++..
T Consensus 98 ~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~-p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 98 GHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQG-PCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred hhhccccccccchhHHHHHHHHHHHHHHHHHHHHHH-HHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000011 2233444455556666666 678999999998765 6799999999999999999998875
No 237
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.76 E-value=1.3e-08 Score=93.06 Aligned_cols=118 Identities=22% Similarity=0.183 Sum_probs=87.4
Q ss_pred CCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHH
Q 009914 255 GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVT 334 (522)
Q Consensus 255 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (522)
+-+....|++-+.+.+..++.++.+|.++||+|||. .++.+.. ...+.+..+.. +.+...+...=++.
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkp-----vll~c~~------~va~s~ll~~~-S~~F~afv~aR~l~ 131 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKP-----VLLACLI------GVALSYLLWAL-SRNFAAFVLARFLG 131 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchH-----HHHHHHH------HHHHHHHHHHH-HHHHHHHHHHHHhh
Confidence 345567889999999999999999999999999993 2222111 11112222222 23333333335677
Q ss_pred HHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 009914 335 GLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 386 (522)
Q Consensus 335 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~ 386 (522)
|++-+...+ ..++++|++++++|+.+++.++...++|-.+||.++|++..
T Consensus 132 Gi~kgnl~v--~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 132 GIFKGNLSV--IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhccCchHH--HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 777776555 89999999999999999999999999999999999999988
No 238
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.75 E-value=1.5e-07 Score=92.42 Aligned_cols=156 Identities=21% Similarity=0.304 Sum_probs=116.7
Q ss_pred HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 009914 253 LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLV 332 (522)
Q Consensus 253 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (522)
++.++..+-+++.+....+.+++.+..|++.||+|.|+ ...... .+.++ ...+.-+.. ....+.+++.=+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~-----v~~~~~-~~sa~-~t~l~P~aa---~~~~~~~~~~R~ 136 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARR-----VFFISG-LISAL-LTLLTPLAA---SIGFYLLLVLRF 136 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchH-----HHHHHH-HHHHH-HHHHHHHHH---HhcchhhHHHHH
Confidence 47788999999999999999999999999999999994 222211 11111 111111111 111124677888
Q ss_pred HHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcccCCCCCCcchhhhhhhhhHH
Q 009914 333 VTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFKPIPKGSSATEEIATDRANAA 412 (522)
Q Consensus 333 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 412 (522)
+.|++.+...| ....+..+-.|+++|++..++.....++|..++-++.|.+.+...||
T Consensus 137 lqGl~~g~~~p-a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW--------------------- 194 (466)
T KOG2532|consen 137 LQGLGQGVLFP-AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGW--------------------- 194 (466)
T ss_pred HhHHHHhHHHh-hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCC---------------------
Confidence 99999999999 89999999999999999999999999999999999999999987788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCccc
Q 009914 413 SLAKALYTAIGIPMALCCFIYSFLYSTYPRD 443 (522)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (522)
...|++.++..++..+++..++.-.|++
T Consensus 195 ---~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 195 ---PSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred ---chHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 4556667776666666666655544433
No 239
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.71 E-value=5.1e-09 Score=98.36 Aligned_cols=129 Identities=13% Similarity=0.075 Sum_probs=102.5
Q ss_pred HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 009914 253 LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLV 332 (522)
Q Consensus 253 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (522)
.++.+....|++.....+..++.+++.|++.||+.|++.. ...+.+-. ...+... . ....|.+.++=.
T Consensus 62 ~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~-----~vG~~iW~----~Av~~~~--f-s~~Fwq~~l~R~ 129 (493)
T KOG1330|consen 62 YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI-----AVGIFIWT----LAVFASG--F-SNHFWQVLLCRG 129 (493)
T ss_pred hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE-----eeHHHHHH----HHHHHHH--H-HHHHHHHHHHHH
Confidence 4899999999999999999999999999999999998532 11111111 1111111 1 145566778888
Q ss_pred HHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcccC
Q 009914 333 VTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFKPI 394 (522)
Q Consensus 333 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~~~ 394 (522)
+.|+|.+...+ +..++++|.+|.+.|++++++++.....|..+|-+.++.+.++.+.|+.+
T Consensus 130 ~vGiGeAs~~~-ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~a 190 (493)
T KOG1330|consen 130 FVGIGEASYSP-IAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWA 190 (493)
T ss_pred Hhccchhhhcc-cchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEE
Confidence 99999999999 99999999999999999999999999999999999999998885556554
No 240
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.69 E-value=5.6e-08 Score=100.23 Aligned_cols=137 Identities=10% Similarity=-0.015 Sum_probs=101.0
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCC--------
Q 009914 247 AAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP-------- 318 (522)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 318 (522)
++.+-++++++..+.|++.+.+.++.+++.++.+++.||.+|++......++. .++..+..+.-+...
T Consensus 56 l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~----~lg~ll~alphf~~~~y~~~~~~ 131 (633)
T TIGR00805 56 LTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIM----GLGSFLLSLPHFLSGRYSYSTTV 131 (633)
T ss_pred chhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHH----HHHHHHHhChHHhcCCccccccc
Confidence 45555679999999999999999999999999999999999886421111111 111111111100000
Q ss_pred ----------------C-----------------C--CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHH
Q 009914 319 ----------------D-----------------D--PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVY 363 (522)
Q Consensus 319 ----------------~-----------------~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (522)
. . ...+..+++.-++.|++.+...+ ...+++.|.+|+++|+...
T Consensus 132 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~-~~~~~i~d~~~~~~~~~~~ 210 (633)
T TIGR00805 132 SSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP-LGISYIDDFAKSKNSPLYI 210 (633)
T ss_pred cccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh-cCchhhhccCCccccHHHH
Confidence 0 0 01244566788899999998888 8899999999999999999
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHh
Q 009914 364 AMDRSFESILSSFAPPVVGILAQHV 388 (522)
Q Consensus 364 g~~~~~~~~~~~i~~~~~g~l~~~~ 388 (522)
|+.+....+|..+|+.++|++.+..
T Consensus 211 ~i~~~~~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 211 GILESIAVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhcc
Confidence 9999999999999999999998763
No 241
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.69 E-value=9.7e-08 Score=78.31 Aligned_cols=112 Identities=16% Similarity=0.281 Sum_probs=80.7
Q ss_pred HHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCc
Q 009914 266 ALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPAT 345 (522)
Q Consensus 266 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 345 (522)
....++.+++.++.+++.||+++|+ ....... ..... .+... . ..+.+......++.|++.+...+ .
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~-----~~~~~~~-~~~~~--~~~~~-~---~~~~~~~~~~~~~~g~~~~~~~~-~ 71 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKP-----VLLVGLF-IFVLS--TAMFA-L---SSNITVLIIARFLQGFGAAFALV-A 71 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhH-----HHHHHHH-HHHHH--HHHHH-H---hccHHHHHHHHHHHHHHHHHHHH-h
Confidence 3456778888999999999999884 3222211 11111 11111 1 12334455677888888887777 7
Q ss_pred chhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 346 NNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
...++.|..|+++|++..++.+....++..++|.+.+.+.+. .++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~ 116 (141)
T TIGR00880 72 GAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF-LGW 116 (141)
T ss_pred HHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-cch
Confidence 889999999999999999999999999999999999999876 454
No 242
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.68 E-value=2e-07 Score=66.67 Aligned_cols=80 Identities=13% Similarity=-0.007 Sum_probs=74.7
Q ss_pred HHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 009914 18 ERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQV 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l 97 (522)
.++.+..+.+++|.++++.++|.++.|++.+...+++.++++...++.++..+++.+..+.+...+..+.+++.++++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 46778889999999999999999999999999999999999999999999888999999999999999999999887654
No 243
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.65 E-value=1.7e-07 Score=86.41 Aligned_cols=161 Identities=15% Similarity=0.154 Sum_probs=129.5
Q ss_pred HhhhhhhHHH-HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhc--hhHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 009914 21 DESLLPGVYK-EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHN--RAHVIALGAFLWAAATFLVAFSSTFAQV 97 (522)
Q Consensus 21 ~~~~~~~~~~-~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g--rr~~l~~~~~~~~~~~~~~~~~~~~~~l 97 (522)
.....-|.++ .+.+.+..+..++|+..--..+.+.++..+.|.++||++ |-.....+++..+++.....+++++..+
T Consensus 285 ~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L 364 (464)
T KOG3764|consen 285 SLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQL 364 (464)
T ss_pred hHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHH
Confidence 3344444445 477788877779999999999999999999999999999 4333555666667777777888999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhccCCC------chhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHH
Q 009914 98 AISRALNGIGLALVAPAIQSLVADSTDDS------NRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIV 171 (522)
Q Consensus 98 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~ 171 (522)
++-++..+++.+..............+.+ -.|...++....+++|..+||.+++.+.+. .|++|.-.+.
T Consensus 365 ~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~-----iGF~wl~~ii 439 (464)
T KOG3764|consen 365 WVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA-----IGFEWLMTII 439 (464)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheee-----hhHHHHHHHH
Confidence 99988888888877777666666666433 346889999999999999999999999998 8999999999
Q ss_pred HHHHHHHHHhhhhcc
Q 009914 172 GLISVVVGTLVRLFA 186 (522)
Q Consensus 172 ~~~~~i~~~~~~~~~ 186 (522)
++..++...+...+.
T Consensus 440 g~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 440 GILNLIYAPVLLLLR 454 (464)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988877766543
No 244
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.63 E-value=2.5e-06 Score=69.99 Aligned_cols=109 Identities=17% Similarity=0.106 Sum_probs=93.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCC
Q 009914 46 LTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDD 125 (522)
Q Consensus 46 ~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 125 (522)
-.++......+..++...+.+++|.|+.++++.+.+.+-.+.. +-++.+.++.+-++.|++.+..+++.-.++.+..++
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 3466666777888889999999999999999999888655543 557888999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009914 126 SNRGVAFGWLQLTSNIGSLVGGLFSVVMAP 155 (522)
Q Consensus 126 ~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~ 155 (522)
+++++..++.......+.++|.++.-.+.+
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999887766543
No 245
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.61 E-value=2.7e-06 Score=82.19 Aligned_cols=150 Identities=15% Similarity=0.197 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHH-hcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH
Q 009914 7 TLVLVNLAGIMERADESLLPGVYKEVGA-ALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT 85 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~ 85 (522)
.+...++.+++.....++......++.+ .+|.++.+..+.......+..++.+++.++.+|+|+|+++.++.++.+++.
T Consensus 237 p~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~ 316 (467)
T COG2211 237 PLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGY 316 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 3444445666666666676666665544 467777777788888888888889999999999999999999999999999
Q ss_pred HHHHhhh--hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCC-------CchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 86 FLVAFSS--TFAQVAISRALNGIGLALVAPAIQSLVADSTDD-------SNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 86 ~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
++..+.+ +.+.+++..++.+++.+...+...++++|..+- ++-|...+....+.=+|..++..+.++....
T Consensus 317 ~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 317 LLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred HHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998876 678888899999999999999999999987752 3347778888888888999999888887754
No 246
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.59 E-value=1e-05 Score=76.13 Aligned_cols=155 Identities=18% Similarity=0.154 Sum_probs=129.8
Q ss_pred HHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHH-HhchhHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHH
Q 009914 30 KEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAI-RHNRAHVIALGAFLWAAATFLVAFS---STFAQVAISRALNG 105 (522)
Q Consensus 30 ~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~D-r~grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G 105 (522)
|+=.+.||+|..|...+......+..++....|++.. |.++++.-.+++....++..+..++ .+.+.+...-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 3445679999999999999999999999999999888 6788888888888877776665544 57889999999999
Q ss_pred HHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc----c-cCCCCchHHHHHHHHHHHHHHH
Q 009914 106 IGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT----F-MGIPGWRISFHIVGLISVVVGT 180 (522)
Q Consensus 106 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~----~-~~~~gw~~~f~~~~~~~~i~~~ 180 (522)
++.|.+.....+.+.+..++++.|..+|.+.....++..+|..+++.+.+.. . ....+|..+|.+-++..++...
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999887532 1 2346788899988887766665
Q ss_pred hhhh
Q 009914 181 LVRL 184 (522)
Q Consensus 181 ~~~~ 184 (522)
+...
T Consensus 393 ll~~ 396 (403)
T PF03209_consen 393 LLGR 396 (403)
T ss_pred HHHH
Confidence 5543
No 247
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.56 E-value=3.6e-07 Score=87.43 Aligned_cols=174 Identities=18% Similarity=0.199 Sum_probs=116.2
Q ss_pred HHHhhhccchhHHHHHHHHHHH-HhC----CChhHHHHHHHHHHHHHhccchhhhhhhhHh-hhcCCCchhHHHHHHHHH
Q 009914 231 VAQGVTGSFPWSALSFAAMWLE-LTG----FSHEKTAFLMALFVIASSLGGLFGGRMGDFL-SARFPNSGRIILAQISSL 304 (522)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~ 304 (522)
..-..--+.+|++...+..|+. +.+ +|.+++.-++..+..-.-+..+++||++||+ |+|+ .+... .++
T Consensus 28 ~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~-----tI~lG-ail 101 (498)
T COG3104 28 FVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR-----TIVLG-AIL 101 (498)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH-----HHHHH-HHH
Confidence 3333444446777777777774 455 9999988888888777778899999999996 6663 21111 111
Q ss_pred HHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcc--hhHHHHHHHHHHHHHHhchhhHHHH
Q 009914 305 SAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK--SRTSVYAMDRSFESILSSFAPPVVG 382 (522)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~i~~~~~g 382 (522)
. ...-..+.... ......+.+.+.+++++.|..-+ ...+++.|++|++ +|-...++..+..++|+.++|.+.+
T Consensus 102 ~---~iGh~~L~~~~-~~~~~gl~i~L~~I~iG~Gl~K~-NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~ 176 (498)
T COG3104 102 M---AIGHLVLAISS-VSGPGGLYIGLALIIVGTGLFKP-NISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITG 176 (498)
T ss_pred H---HHHHHHHhccc-cccccHHHHHHHHHHhccccccc-cHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHH
Confidence 1 11222222221 01223366777888899999988 8899999999754 3556778888888999999999999
Q ss_pred HHHHHhhCcccCCCCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 009914 383 ILAQHVYGFKPIPKGSSATEEIATDRANAASLAKALYTAIGIPMALCCFIYSFLYSTY 440 (522)
Q Consensus 383 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (522)
++.++ .||+ ..|...++-...+++.++...++.
T Consensus 177 ~~~~~-~g~~------------------------~gF~~aavGm~~gl~~f~~~~r~~ 209 (498)
T COG3104 177 LLAIN-YGWH------------------------VGFGLAAVGMIIGLVIFLLGRRHV 209 (498)
T ss_pred HHHHh-hCHH------------------------HHHHHHHHHHHHHHHHHHHccchh
Confidence 99999 6763 335555555555555555555443
No 248
>PRK11462 putative transporter; Provisional
Probab=98.56 E-value=5.1e-06 Score=82.95 Aligned_cols=145 Identities=14% Similarity=0.106 Sum_probs=95.9
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh
Q 009914 12 NLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS 91 (522)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~ 91 (522)
....++.............++.+...-++...+.+.+.+.++.+++.+++++++||+|+|+.+..+..+.++..++..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~ 313 (460)
T PRK11462 234 GLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFV 313 (460)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 33344444444444444444444444345556677788888999999999999999999998775555444433333333
Q ss_pred h--hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 92 S--TFAQVAISRALNGIGLALVAPAIQSLVADSTD-------DSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 92 ~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
+ +...+++.-++.|++.+...+...++++|..+ +++.+..++......-+|..+++.+++.+...
T Consensus 314 ~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 314 PMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 23344555567788877777777788888766 23335556777788889999999998887754
No 249
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.54 E-value=0.0007 Score=66.97 Aligned_cols=274 Identities=12% Similarity=0.109 Sum_probs=149.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhc---CCChhhhHHHHHHHHHH-HHhhhhhHHHHHHHhchhHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAAL---HTDPTGLGSLTLFRSIV-QASCYPIAAYLAIRHNRAHVIALGAFLW 81 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~s~~~~g~~~s~~~~~-~~i~~~~~G~l~Dr~grr~~l~~~~~~~ 81 (522)
+.++.+.+..|+..+.++..- .+.+.+ ...++.+..+-....+. ..+...+..++++|+++.+++-+....+
T Consensus 24 ~k~~~l~~m~f~i~f~y~~lR----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F 99 (491)
T PF03219_consen 24 KKFLPLALMFFFILFNYTILR----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPF 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 445555666666555544432 222222 12455566665555553 3455677899999999999877666665
Q ss_pred HHHHHHHHhh--h-----------------------------hHHHHHHHHHHHHHHhhhhHH-HHHHHHhhccCCCchh
Q 009914 82 AAATFLVAFS--S-----------------------------TFAQVAISRALNGIGLALVAP-AIQSLVADSTDDSNRG 129 (522)
Q Consensus 82 ~~~~~~~~~~--~-----------------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~ 129 (522)
.....++++. | +.|...+..++.-+-.....+ .-..+..|.++.+|-.
T Consensus 100 ~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAK 179 (491)
T PF03219_consen 100 LGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAK 179 (491)
T ss_pred HHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 5555555442 1 112233444444444344333 4578899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc-c---cccCCCCchHHHHHHH----HHHHHHHHhhhhccC----CCCCCCCCCC
Q 009914 130 VAFGWLQLTSNIGSLVGGLFSVVMAP-M---TFMGIPGWRISFHIVG----LISVVVGTLVRLFAN----DPHFPDGGTA 197 (522)
Q Consensus 130 ~~~~~~~~~~~lg~~~g~~l~~~l~~-~---~~~~~~gw~~~f~~~~----~~~~i~~~~~~~~~~----~~~~~~~~~~ 197 (522)
|..+++..+.++|.++++.+..++.+ . ...+...|...+.... +.+++......++.+ +|...+...+
T Consensus 180 RfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~~ 259 (491)
T PF03219_consen 180 RFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAKK 259 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhhc
Confidence 99999999999999999998888877 1 1122345654443222 222222222222221 1221111111
Q ss_pred CCcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchhHHH-HHHHHHHHHhCCChhH----HHHHHHHHHHHH
Q 009914 198 NSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLELTGFSHEK----TAFLMALFVIAS 272 (522)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~----~~~~~~~~~~~~ 272 (522)
+++++++ ....+..+.++++|.+..+.+..+.+....... ...-..+++.--++.+ .|.+....++..
T Consensus 260 ~kk~k~k-------~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivt 332 (491)
T PF03219_consen 260 KKKKKPK-------MSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVT 332 (491)
T ss_pred ccccCCC-------ccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH
Confidence 1111111 223355566778888777766555554432221 1122222322223322 344455556666
Q ss_pred hccchhhhhhhhHhhhcC
Q 009914 273 SLGGLFGGRMGDFLSARF 290 (522)
Q Consensus 273 ~~~~~~~g~l~~~~~~~~ 290 (522)
++..++++.+.+|+|-+.
T Consensus 333 ii~~~l~~~iir~~GW~~ 350 (491)
T PF03219_consen 333 IIMMFLSSNIIRRFGWRT 350 (491)
T ss_pred HHHHHHHHHHHHHhhHHH
Confidence 667788888989888773
No 250
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.53 E-value=7.4e-06 Score=76.32 Aligned_cols=166 Identities=18% Similarity=0.083 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHh-cCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAA-LHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAA 84 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~ 84 (522)
+.+..-.++.|+...........++.+.++ .|.+..+.+...+.+..+.+++.+++.++..|+...|.+.+..++..+.
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill 315 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILL 315 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 344555666666666666666666666666 8889999999999999999999999999999999999999988888888
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCc
Q 009914 85 TFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGW 164 (522)
Q Consensus 85 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw 164 (522)
++..+++++...++ +.++.|+..+..+|...++..+..+ +.....|..-....+|.++-|.+.|++.+. .|-
T Consensus 316 ~~~~~l~~g~v~~~-~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~-----~g~ 387 (422)
T COG0738 316 LLAVALIGGVVALY-ALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADM-----FGI 387 (422)
T ss_pred HHHHHHhcChHHHH-HHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHh-----hhh
Confidence 88888888855444 5578899999999999999999998 334556666666778999999999999998 788
Q ss_pred hHHHHHHHHHHHHHH
Q 009914 165 RISFHIVGLISVVVG 179 (522)
Q Consensus 165 ~~~f~~~~~~~~i~~ 179 (522)
...+.+...++.+..
T Consensus 388 ~~~~~~~pllc~lyV 402 (422)
T COG0738 388 QLTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888775555555444
No 251
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.50 E-value=1.2e-06 Score=62.49 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHH
Q 009914 10 LVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFL 80 (522)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~ 80 (522)
.+...+++.......+.|.+|.+.++.|.|+.++|.+.++..+...++.+++|.++||+++++.++.....
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 34556667777778888889999999999999999999999999999999999999999998887666544
No 252
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.46 E-value=3.9e-06 Score=85.66 Aligned_cols=121 Identities=18% Similarity=0.203 Sum_probs=94.8
Q ss_pred HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHH
Q 009914 253 LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLV 332 (522)
Q Consensus 253 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (522)
....+.....+..++..++.++|.++.|.++||+|||+ .++....+.....+.... ..+.+.+.++=+
T Consensus 112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~-----~~~~~~~~~~i~~~~~a~-------a~~~~~~~~~Rf 179 (521)
T KOG0255|consen 112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKP-----VLLVSLLLFIIFGILTAF-------APNYWMFLIFRF 179 (521)
T ss_pred eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHH-----HHHHHHHHHHHHHHHHHH-------hCcHHHHHHHHH
Confidence 45667778888999999999999999999999999994 333322222221111111 355666888899
Q ss_pred HHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 333 VTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 333 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
+.|++.+.... ....++.|.+++++|+.+..+ ......++.+++++.+++...
T Consensus 180 l~G~~~~~~~~-~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~ 232 (521)
T KOG0255|consen 180 LSGFFGSGPLT-VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRD 232 (521)
T ss_pred HHHhhccchhH-HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 99999998888 899999999999999999999 888888999999999888873
No 253
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.46 E-value=9.9e-06 Score=73.47 Aligned_cols=339 Identities=11% Similarity=0.029 Sum_probs=199.0
Q ss_pred hhhHHHHHH-HhcCCChhhhH-HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 009914 25 LPGVYKEVG-AALHTDPTGLG-SLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRA 102 (522)
Q Consensus 25 ~~~~~~~~~-~~~g~s~~~~g-~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 102 (522)
-+.+.|++. .+.+++..++. -+.-...-.+.+.-.+.=.+.|-.-.|++++.-.+.......+..+.++.+.+=+.-+
T Consensus 24 eP~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~ 103 (433)
T KOG3810|consen 24 EPYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEF 103 (433)
T ss_pred CCccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehh
Confidence 344455544 45566666543 1222222333444445557889888899988877777788888888999999999999
Q ss_pred HHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhh
Q 009914 103 LNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLV 182 (522)
Q Consensus 103 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~ 182 (522)
..|...+ ...+.++++-+..+++++.++.+...+..-.|...|..++..+.+.. ..++...=.+.-....+..++.
T Consensus 104 FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~---~~sy~~LN~ISL~~~~ia~~~A 179 (433)
T KOG3810|consen 104 FYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLE---TLSYTTLNYISLAEVTIAVLLA 179 (433)
T ss_pred hcChHHH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhc---ccchhhhchhhHHHHHHHHHHH
Confidence 9998754 45588899999999999999999999999999999999999888651 1334444444433334444445
Q ss_pred hhccCCCCCCCCCCC--------CCcccccchhh----hhhHHHHHHhhhhhcchhHHHHHHHhhhccc-hhHHHHHHHH
Q 009914 183 RLFANDPHFPDGGTA--------NSDQVSSKSFR----SDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF-PWSALSFAAM 249 (522)
Q Consensus 183 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 249 (522)
.++|+.++..-.+++ .++.....+.. ..+....++.....++|.+...-+.-.+... .+-..++...
T Consensus 180 ~fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~ 259 (433)
T KOG3810|consen 180 LFLPRVKRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQI 259 (433)
T ss_pred hhCCCCchhhhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHH
Confidence 555543322111100 00001111111 1123334455666777776555444333333 3444445444
Q ss_pred HHHHhC--CChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHH
Q 009914 250 WLELTG--FSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMH 327 (522)
Q Consensus 250 ~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (522)
.-++.. -.....|..-++..+.++++.+..|++.-++.|.. ..++...+ ...++..++ .......|+.
T Consensus 260 LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g----~~ll~~~s----~~~agllf~--m~~t~~Iw~~ 329 (433)
T KOG3810|consen 260 LWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWG----DLLLAVGS----AVQAGLLFI--MAQTQHIWVC 329 (433)
T ss_pred HHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhh----HHHHHHHH----HHhhhhhhh--hhcccceehh
Confidence 444432 11122355556666777778888888766555542 12222221 111222222 1223445556
Q ss_pred HHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhh
Q 009914 328 GLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAP 378 (522)
Q Consensus 328 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~ 378 (522)
.+...++........+ +...-+++....+.-|...|+..++.-+...+-.
T Consensus 330 Ya~yvlfr~~y~l~it-iA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT 379 (433)
T KOG3810|consen 330 YAGYVLFRVIYQLTIT-IATFQIARNLSSELFGLVFGINTFVALILQSILT 379 (433)
T ss_pred hhhHHHHHhhHhhhhh-HHHHHHHHhhhhhhheeeeehHHHHHHHHHHhhe
Confidence 6777777777777777 5566666666778889999988877665554433
No 254
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.45 E-value=0.0018 Score=62.32 Aligned_cols=273 Identities=13% Similarity=0.039 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcC---CChhhhHHHHHHHHH-HHHhhhhhHHHHHHHhchhHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALH---TDPTGLGSLTLFRSI-VQASCYPIAAYLAIRHNRAHVIALGAFLW 81 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~g~~~s~~~~-~~~i~~~~~G~l~Dr~grr~~l~~~~~~~ 81 (522)
..++.+.+..++..+.++.. -.+.+.+. ..+..+.++-+..-+ +..+..++.+++.+++.+.+++-+.+..+
T Consensus 27 ~kflpl~Ll~f~I~~ny~~l----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F 102 (509)
T COG3202 27 KKFLPLALLFFCILFNYNLL----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFF 102 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 34445555555555544443 34455554 346667788787777 66778889999999999999988777777
Q ss_pred HHHHHHHHhh---------hh-----------------------HHHHHHHHHHHHHHhhhhHH-HHHHHHhhccCCCch
Q 009914 82 AAATFLVAFS---------ST-----------------------FAQVAISRALNGIGLALVAP-AIQSLVADSTDDSNR 128 (522)
Q Consensus 82 ~~~~~~~~~~---------~~-----------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r 128 (522)
....+++++. ++ .|..-+..++.=+-.+.... .-.....|.++.+|-
T Consensus 103 ~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ea 182 (509)
T COG3202 103 LGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEA 182 (509)
T ss_pred HHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 7777776653 11 13333334444443343333 456778888888899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcccc-----cCCCCchHHHHHHHHHHHHHHHhhhhccC----CCCCCCCCC-CC
Q 009914 129 GVAFGWLQLTSNIGSLVGGLFSVVMAPMTF-----MGIPGWRISFHIVGLISVVVGTLVRLFAN----DPHFPDGGT-AN 198 (522)
Q Consensus 129 ~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~-----~~~~gw~~~f~~~~~~~~i~~~~~~~~~~----~~~~~~~~~-~~ 198 (522)
.|.+++++.+.+++..++..+..++..... ......+..+.+.+..++++..+..++-+ +|....... ++
T Consensus 183 kRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk 262 (509)
T COG3202 183 KRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKK 262 (509)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhccc
Confidence 999999999999999999999988876310 00011445555555555555555444332 232210111 11
Q ss_pred CcccccchhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchhHHH--HHHHHHHHHhCCChhH---HHHHHHHHHHH-H
Q 009914 199 SDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL--SFAAMWLELTGFSHEK---TAFLMALFVIA-S 272 (522)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~---~~~~~~~~~~~-~ 272 (522)
++++.+ ....+..+.+.+.|.++.+.+...++....... .|-...-+.+-.+.+. .|.+....++. .
T Consensus 263 ~~~k~k-------~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~ 335 (509)
T COG3202 263 KKKKLK-------LGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSL 335 (509)
T ss_pred cccccc-------CcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHH
Confidence 111111 223345566677777776655555444422111 2222221112222222 23334444444 4
Q ss_pred hccchhhhhhhhHhhhc
Q 009914 273 SLGGLFGGRMGDFLSAR 289 (522)
Q Consensus 273 ~~~~~~~g~l~~~~~~~ 289 (522)
++....++.+.+|.|-.
T Consensus 336 v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 336 VVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHhhhHHHHHHhhHH
Confidence 45566788888888765
No 255
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.44 E-value=0.00021 Score=72.14 Aligned_cols=156 Identities=19% Similarity=0.253 Sum_probs=123.1
Q ss_pred hhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHh-chhHHHHHHHHHHHHHHHHHHhhhh--------
Q 009914 23 SLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRH-NRAHVIALGAFLWAAATFLVAFSST-------- 93 (522)
Q Consensus 23 ~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-grr~~l~~~~~~~~~~~~~~~~~~~-------- 93 (522)
.....++.++.++++.+...+.-..+.+.-...+..+.++.++|-| ||-+++.++.++..++..+..+...
T Consensus 55 g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~ 134 (571)
T KOG1237|consen 55 GLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFM 134 (571)
T ss_pred cchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 3456778888999999988888888888888888899999999975 8888999999888888665544321
Q ss_pred -----------------HHHHHHHHHHHHHHhhhhHHHHHHHHhhccC---CC---chhHHHHHHHHHHHHHHHHHHHHH
Q 009914 94 -----------------FAQVAISRALNGIGLALVAPAIQSLVADSTD---DS---NRGVAFGWLQLTSNIGSLVGGLFS 150 (522)
Q Consensus 94 -----------------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~lg~~~g~~l~ 150 (522)
...++.+.-+..+|.|..-|...++-+|-++ ++ .+...+.++....++|..++..+-
T Consensus 135 ~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~ 214 (571)
T KOG1237|consen 135 CKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVL 214 (571)
T ss_pred ccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHH
Confidence 1245666777788999999999999999998 32 234678899999999999998888
Q ss_pred HhhhcccccCCCCchHHHHHHHHHHHHHHHhhh
Q 009914 151 VVMAPMTFMGIPGWRISFHIVGLISVVVGTLVR 183 (522)
Q Consensus 151 ~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~ 183 (522)
.+.-+. .+|.+.|.+..+...++.++..
T Consensus 215 vyiq~~-----~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 215 VYIQDN-----VGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred Hhhhhc-----ccceeeccHHHHHHHHHHHHHH
Confidence 887666 8999999988877666655544
No 256
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.44 E-value=4.7e-06 Score=83.57 Aligned_cols=131 Identities=18% Similarity=0.205 Sum_probs=83.4
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhH
Q 009914 246 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 325 (522)
Q Consensus 246 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (522)
.++.+.+++|-+ ....++.....++..++.++.|+++|.+|||. ..+... ++ ..+...... ..++.-
T Consensus 66 ~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~-----~~i~g~--~l----~vvG~Iv~a-tA~~~~ 132 (599)
T PF06609_consen 66 ILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRY-----FFIIGS--LL----GVVGSIVCA-TAQNMN 132 (599)
T ss_pred HHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchH-----HHHHHH--HH----HHhHHHHhh-cCCcHH
Confidence 345555678765 44667778888899999999999999999994 222111 11 111111111 123344
Q ss_pred HHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCcc
Q 009914 326 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 326 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~~ 392 (522)
.++....+.|++.+.... ....++|..|.+.|....++.....-....++|.+...+... .+|+
T Consensus 133 ~~iag~~l~GvgaG~~~~--~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~-~~WR 196 (599)
T PF06609_consen 133 TFIAGMVLYGVGAGVQEL--AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAH-SGWR 196 (599)
T ss_pred HHHHHHHHHHHhhHHHHH--HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccC-CCcc
Confidence 467788888888765554 566689999999998887776655444445666666555444 4554
No 257
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.43 E-value=8.5e-06 Score=72.68 Aligned_cols=138 Identities=16% Similarity=0.176 Sum_probs=89.9
Q ss_pred chhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCC
Q 009914 239 FPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP 318 (522)
Q Consensus 239 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (522)
..|.+..|.|..-+++|+|..+...+.....++..+ .++.|.+.|+++.+ ..+.............+.+....
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~------~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW------VVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH------HHHHHHHHHHHHHHHHHHHHHhC
Confidence 345666677777778999999999999999999876 48899999999987 22222222222222222222222
Q ss_pred CC-CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHH
Q 009914 319 DD-PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 385 (522)
Q Consensus 319 ~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~ 385 (522)
.. ....+.+.+..++.+.+..+... .......+.+| ++||++.|+.-....+++++-..+...+.
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~t-a~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNT-ASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhh-HHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 21 23445455566666666666666 44445556777 67999999999998888776666544443
No 258
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.37 E-value=2e-06 Score=84.87 Aligned_cols=122 Identities=15% Similarity=0.050 Sum_probs=94.5
Q ss_pred HHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 009914 252 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVL 331 (522)
Q Consensus 252 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (522)
++.++...+.+.+.+++.++.+++.+.++.+.||++..+ .+.. ...+.++ +..+... ..+.+.+++.-
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~-----~l~~-~~~~w~~-~~~~~~~-----~~s~~~~ialr 141 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSK-----GLSV-SGILWGL-FGFLTAA-----VHSFPGLIALR 141 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHH-----HHHH-HHHHHHH-HHHHHHH-----HhhhHHHHHHH
Confidence 357788889999999999999999999999999998542 2221 1111111 1111111 23445577889
Q ss_pred HHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 009914 332 VVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 386 (522)
Q Consensus 332 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~ 386 (522)
++.|++.+...| ....++...+.+++|+..+|+.+....+|+++|+.+...+..
T Consensus 142 ~llGl~es~~wP-~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~ 195 (495)
T KOG2533|consen 142 FLLGLFESGGWP-GVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK 195 (495)
T ss_pred HHHHHHhcccch-HHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh
Confidence 999999999999 899999999999999999999999999999999999888765
No 259
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.31 E-value=0.0002 Score=67.63 Aligned_cols=357 Identities=12% Similarity=0.004 Sum_probs=158.6
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHH--HHHHHHH--
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHV--IALGAFL-- 80 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~--l~~~~~~-- 80 (522)
.......++..+-....++.+....+++.+.+-.+.. .-.....+.+...+...+...+--+...|.. +..+...
T Consensus 17 ~~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~ 95 (406)
T KOG1479|consen 17 NLVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIA 95 (406)
T ss_pred ccHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555566677788888888887755444 3333344444444444444443333332221 1111111
Q ss_pred -HHHHHHHHHh-------hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHH--
Q 009914 81 -WAAATFLVAF-------SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFS-- 150 (522)
Q Consensus 81 -~~~~~~~~~~-------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~-- 150 (522)
..+..+..+. ...+...++.-.+.+.+.+..........++ +|++. ..-+..+.++++++..++.
T Consensus 96 il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y----tqavm~G~a~aG~l~Sl~~i~ 170 (406)
T KOG1479|consen 96 ILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY----TQAVMSGQALAGTLTSLLRIL 170 (406)
T ss_pred HHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHH----HHHHHhcchhHhHHHHHHHHH
Confidence 1111122222 1245666778888888888888777777776 45442 2233333444443333322
Q ss_pred -HhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCC---CCCCC-----CCcccccchhhhhhHHHHHHhhhh
Q 009914 151 -VVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFP---DGGTA-----NSDQVSSKSFRSDVKVLIQEAKSV 221 (522)
Q Consensus 151 -~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 221 (522)
....+. ...+-..-|.+..++.+++.+....+++.|-.+ +++.+ .+++.+++... .+.....+.+
T Consensus 171 tka~~~~---~~~sA~~yF~~s~~~~llC~i~y~~l~~lpf~~yy~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~i 244 (406)
T KOG1479|consen 171 TKAAFSD---SRTSALIYFITSTVILLLCFVLYLVLPKLPFVRYYREKAGSIGSKLAAEGIESDSSL---SNEDDSLWDI 244 (406)
T ss_pred HHHhcCC---CCceeehhHHHHHHHHHHHHHHHHHhhcchHHHHHhhhccccccccccccccccccc---ccccchHHHH
Confidence 222221 112222333333343344444434344433111 00000 00000111111 1100022222
Q ss_pred hcchhHHHHHHHhhhccchhHHHHHHHHHHHH---hCC-ChhHHHHHHHH-HHHHHhccchhhhhhhhHhhhcCCCchhH
Q 009914 222 IKIPSFQIIVAQGVTGSFPWSALSFAAMWLEL---TGF-SHEKTAFLMAL-FVIASSLGGLFGGRMGDFLSARFPNSGRI 296 (522)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~-~~~~~~~~~~~-~~~~~~~~~~~~g~l~~~~~~~~~~~~~~ 296 (522)
+++-......+ .+.+ ....+..|-+..+ .+. +....-.+... +.+...+|.+...++..+-+|. +
T Consensus 245 ~~k~~~~~~~i-~lvy---~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~------l 314 (406)
T KOG1479|consen 245 FKKIKDLAFNI-FLVY---FVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRK------L 314 (406)
T ss_pred HHHHHHHhhch-heee---eeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCce------e
Confidence 22211111111 1111 1122334655532 122 23334455555 7788888877776665543232 2
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhc
Q 009914 297 ILAQISSLSAIPLAALLLLV-LPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSS 375 (522)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 375 (522)
......=...+++..++... .+..-...++......++|+..|.... ..+.+..+.+|++++-. .|....+.-.++.
T Consensus 315 ~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlts-l~m~~aPk~v~~~e~e~-aG~~m~~fl~~Gl 392 (406)
T KOG1479|consen 315 TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTS-LIMMYAPKQVKPSEKEA-AGNLMVFFLVGGL 392 (406)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhh-heehhcCCCCChHHHHH-HHHHHHHHHHHHH
Confidence 22222222222222222110 111112234466788889999998888 88888888888776644 4444444444444
Q ss_pred hhhHHHHHHH
Q 009914 376 FAPPVVGILA 385 (522)
Q Consensus 376 i~~~~~g~l~ 385 (522)
....+.+++.
T Consensus 393 ~~G~~~s~l~ 402 (406)
T KOG1479|consen 393 ALGSLLSWVF 402 (406)
T ss_pred HHhhHHHHHH
Confidence 4444444443
No 260
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.29 E-value=4.8e-05 Score=77.28 Aligned_cols=179 Identities=12% Similarity=0.025 Sum_probs=117.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHH
Q 009914 5 TVTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAA 84 (522)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~ 84 (522)
++.+..+.+..+....+.+......+.+.+..|.+... .+...+..+...++..++..+.||+|||+.++.+...+.++
T Consensus 294 ~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~ 372 (513)
T KOG0254|consen 294 KRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSIC 372 (513)
T ss_pred HHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHH
Confidence 34455566666666666677778888888888877554 44555566666777777899999999999999999999999
Q ss_pred HHHHHhhhhH-------------HHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 009914 85 TFLVAFSSTF-------------AQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSV 151 (522)
Q Consensus 85 ~~~~~~~~~~-------------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~ 151 (522)
.++++..... ..+....+..........+....+.+|.+|.+-|+++.++......+...+-.....
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~ 452 (513)
T KOG0254|consen 373 LVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFP 452 (513)
T ss_pred HHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9888765221 112222222223333344455578899999999999999887777665554443333
Q ss_pred hhhcccccCCCCchHHHHHHHHHHHHHHH-hhhhccCCC
Q 009914 152 VMAPMTFMGIPGWRISFHIVGLISVVVGT-LVRLFANDP 189 (522)
Q Consensus 152 ~l~~~~~~~~~gw~~~f~~~~~~~~i~~~-~~~~~~~~~ 189 (522)
.+... .++...|...+..+.+... ..+++.+|.
T Consensus 453 ~~~~~-----~~~~~~f~~f~~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 453 FITEA-----LGIGGTFGYFGGICLLSLIIFVFFFVPET 486 (513)
T ss_pred HHHHh-----ccccchHHHHHHHHHHHHHHHheEEcccC
Confidence 33332 2345666666666666665 455544443
No 261
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.28 E-value=2.2e-05 Score=74.29 Aligned_cols=122 Identities=17% Similarity=0.145 Sum_probs=84.0
Q ss_pred CChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC--chhHHHHHHHHH
Q 009914 256 FSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDP--STPVMHGLVLVV 333 (522)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 333 (522)
++....+.+.+...++.++|+++.|++.||+|||+.. -....+.+ ......-+.....+ ...+.+...=++
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vY-----G~~liImI--i~t~~~~~s~~~~~~~~~m~~L~~~R~~ 153 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVY-----GKELIIMI--ICSALSGLSVGTTSPLGVMMTLCFFRFL 153 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhh-----hHHHHHHH--HHHHHhccCCCCCCCcchhhHHHHHHHH
Confidence 5667788899999999999999999999999999642 11111111 11111111111112 223445556678
Q ss_pred HHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHH
Q 009914 334 TGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 385 (522)
Q Consensus 334 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~ 385 (522)
+|+|.|.=+| ...++.+|....+.||.-.+...+++..|...|.++.-.+.
T Consensus 154 LGiGIGGDYP-lSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~ 204 (538)
T KOG0252|consen 154 LGIGIGGDYP-LSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 204 (538)
T ss_pred hhccccCCCc-chHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHH
Confidence 9999999999 99999999999999999988888877777666655544443
No 262
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.10 E-value=4.4e-05 Score=74.15 Aligned_cols=108 Identities=24% Similarity=0.386 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhh---h------HHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCC---chhHHHHHHHHHH
Q 009914 72 HVIALGAFLWAAATFLVAFSS---T------FAQVAISRALNGIGLALVAPAIQSLVADSTDDS---NRGVAFGWLQLTS 139 (522)
Q Consensus 72 ~~l~~~~~~~~~~~~~~~~~~---~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 139 (522)
|+++++.+++.+|.++..++. + .+.++++..+.++|.|+.-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 578888899999988855442 2 357889999999999999999999999999765 4677889999999
Q ss_pred HHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhh
Q 009914 140 NIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRL 184 (522)
Q Consensus 140 ~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~ 184 (522)
++|..++..+.+++-+. .+|.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~-----~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQN-----YGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHC-----S-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccc-----cchhhhhhHHHHHHHHHHHHHHh
Confidence 99999999999999887 89999999998877766665544
No 263
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.05 E-value=8.8e-08 Score=95.90 Aligned_cols=113 Identities=17% Similarity=0.140 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHH
Q 009914 259 EKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFI 338 (522)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 338 (522)
...++..+...++.++|+++.|+++||+|||+.. .... .+. .+..+. ........+.+.+.+.-++.|++.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~-----~~~~--~~~-~i~~~~-~~~~~~~~~~~~~~~~R~~~G~~~ 116 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPAL-----IISA--LLM-IIGSIL-IAFAPSYNNFWMLLIGRFLIGFGI 116 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccc-----cccc--ccc-cccccc-cccccccccccccccccccccccc
Confidence 4567888899999999999999999999999631 1111 110 011111 111111124555677788899999
Q ss_pred hccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHH
Q 009914 339 SWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 381 (522)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~ 381 (522)
+...+ ....++.|..|++.|+...++.+....+|..++..+.
T Consensus 117 g~~~~-~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~ 158 (451)
T PF00083_consen 117 GGAYV-VSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIG 158 (451)
T ss_pred ccccc-ccccccccccccccccccccccccccccccccccccc
Confidence 98888 8999999999999999999998888777777666554
No 264
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.99 E-value=0.00067 Score=63.01 Aligned_cols=125 Identities=22% Similarity=0.238 Sum_probs=76.4
Q ss_pred HHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHH
Q 009914 252 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVL 331 (522)
Q Consensus 252 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (522)
+++|++..+++.++.......++...+.|.++||+|||+. . +..++.-...++. ...++...+++.=
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~------c----l~~cily~~scl~---k~~~~~~~L~~GR 128 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKA------C----LLFCILYSLSCLT---KHSSNYPVLLLGR 128 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH------H----HHHHHHHHHHHHH---HhccccHHHHHHH
Confidence 5799999999999999999999999999999999999941 1 1111111111111 1234455566677
Q ss_pred HHHHHHHhccCCCcchhh-hhhh----cCcchhHHHHHHHHHH-HHHHhchhhHHHHHHHHHhhCc
Q 009914 332 VVTGLFISWNAPATNNPI-FAEI----VPEKSRTSVYAMDRSF-ESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 332 ~~~g~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~g~~~~~-~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
++.|++...... ..-++ +.|. +|++..+...+...+. +.+...++..++.++.+. .+.
T Consensus 129 vlgGiaTSLLfS-~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~-~~~ 192 (354)
T PF05631_consen 129 VLGGIATSLLFS-AFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW-FGF 192 (354)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH-hCC
Confidence 777877776555 33333 3333 3445555555555533 334445555566666666 444
No 265
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.96 E-value=0.00023 Score=70.08 Aligned_cols=124 Identities=15% Similarity=0.164 Sum_probs=111.7
Q ss_pred HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHH-HHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 009914 31 EVGAALHTDPTGLGSLTLFRSIVQASCYPIAA-YLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLA 109 (522)
Q Consensus 31 ~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G-~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 109 (522)
++...+++++.+.+.+.+...+...+++.+.. .+...+|-|+++..|+....+..+..+++.+.|+++...++.++. .
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~ 345 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-G 345 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-c
Confidence 44557899999999999999999999998877 777788999999999999999999999999999999988888775 7
Q ss_pred hhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009914 110 LVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP 155 (522)
Q Consensus 110 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~ 155 (522)
...|+..+.++.+.+++++|+.+++......+..+++|.+-+.+..
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 8888999999999999999999999999999999999999887754
No 266
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.92 E-value=2.8e-05 Score=75.44 Aligned_cols=130 Identities=14% Similarity=0.115 Sum_probs=91.3
Q ss_pred HHHHHH--hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhh-cCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCc-h
Q 009914 248 AMWLEL--TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSA-RFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS-T 323 (522)
Q Consensus 248 ~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 323 (522)
-.|+++ .+.+.+..|++.+...++.++++++.|+...|.+. |+| ++...+. ..++-++++.....++ .
T Consensus 58 wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~P----li~s~ii----~~~g~llY~~l~~~~~~~ 129 (488)
T KOG2325|consen 58 WPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP----LIVSFLI----AIIGNLLYLALAYVPNGV 129 (488)
T ss_pred chhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccC----HHHHHHH----HHHHHHHHHHHHhcccch
Confidence 355654 78888899999999999999999999999999875 433 2222221 1222233322333333 5
Q ss_pred hHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 324 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
.++.+++-++.|++.+.... .-+++++..-.++|.++++..+....++..+||.+...+...
T Consensus 130 ~y~mL~~R~l~Gvg~~n~a~--lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L 191 (488)
T KOG2325|consen 130 KYLMLVARILTGVGVGNFAV--LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL 191 (488)
T ss_pred HHHHHHHHHHcCcCcccHHH--HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh
Confidence 56677778888888765555 788888877778899999998888888888888876555443
No 267
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.87 E-value=0.0021 Score=63.23 Aligned_cols=114 Identities=12% Similarity=0.051 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCC------CCchhHHHHHHHHH
Q 009914 260 KTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPD------DPSTPVMHGLVLVV 333 (522)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 333 (522)
..-.+...+.++-.+|+.+..+..- .++|.. .+....+.=++.+++..++ .... .-.+.+..++..++
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~---~l~i~s~~R~iFIPlf~lc--n~~~~~~~p~~~~~d~~~~~~~~l 381 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFMW-PDEDSR---WLPILSFLRVLFIPLFLLC--NYPQRSRLPVFFPGDAYFIILMLL 381 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEe-eCCCcc---chHHHHHHHHHHHHHHHHh--cCCccccCCeeecccHHHHHHHHH
Confidence 4456677788999999986654311 111110 1222222222222222222 1110 11234456677899
Q ss_pred HHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHH
Q 009914 334 TGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPV 380 (522)
Q Consensus 334 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~ 380 (522)
+|+..|.... ..+.+..+.+++++|..+-.+......+|-.+|..+
T Consensus 382 ~gltnGy~~s-~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 382 FGFSNGYLGS-LSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHhhhHHHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888 778888888888888777777777666666666554
No 268
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.86 E-value=0.0011 Score=68.30 Aligned_cols=140 Identities=18% Similarity=0.181 Sum_probs=92.2
Q ss_pred hHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHh-hhcCCCchhHHHHHHHHHHHHHHHHHHHHhCC
Q 009914 241 WSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL-SARFPNSGRIILAQISSLSAIPLAALLLLVLP 318 (522)
Q Consensus 241 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (522)
|++...+..|+. .+|++...+..+...+....-+..+++|+++|++ |+++ .+.. ..++..+....+.+...+
T Consensus 4 YGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~-----tIl~-~~ii~~lG~~llai~a~~ 77 (654)
T TIGR00926 4 YGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFK-----TILY-LSIVYVVGHALLSFGAIP 77 (654)
T ss_pred eecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH-----HHHH-HHHHHHHHHHHHHhccCc
Confidence 455556666664 5899988888888887777778888999999975 5552 2221 111111111111111111
Q ss_pred CC--CchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcc---hhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 319 DD--PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK---SRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 319 ~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
.. .......++.+.+.++|.+..-+ ...+...|.++++ .+-+.+.+.....++|+.+++.+.+++.+.
T Consensus 78 ~~~~~~~~~~~l~gLaLia~G~GgiKp-~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~ 150 (654)
T TIGR00926 78 SSGHPLHDLLDLLGLALIALGTGGIKP-CVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGD 150 (654)
T ss_pred ccccchHHHHHHHHHHHHHhhcccccc-CchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 11123355677788888888888 8889999888654 366788888888999999999999988765
No 269
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.76 E-value=0.00086 Score=63.77 Aligned_cols=133 Identities=15% Similarity=0.063 Sum_probs=85.7
Q ss_pred HHHHHHH-hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhH
Q 009914 247 AAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 325 (522)
Q Consensus 247 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (522)
...+.+. +| +...+-++..++.+..+...+.+.|+.||+|-|. .....+..-++....=+....+..++..+
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~------a~llgt~ln~iGa~Ir~iss~p~v~~~f~ 139 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRT------ALLLGTVLNGIGAWIRLISSLPFVPPLFR 139 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHH------HHHHHHHHHHHHHHHhhhccCccccccch
Confidence 3344543 66 6777888889999999999999999999999983 22222222222211111222222223333
Q ss_pred --HHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 326 --MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 326 --~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
+......+.+........ .-.-+..-.+|+++|+++..+..+.+.+|.+++..+...+..+
T Consensus 140 ~~l~~~Gq~iaa~Aq~Fim~-lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 140 RPLTHTGQSIAAAAQPFILG-LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred hhhhHHhHHHHHHhhhHhhc-cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 444555666665555544 3334555668999999999999988889988888877777665
No 270
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.76 E-value=0.00093 Score=58.90 Aligned_cols=247 Identities=13% Similarity=0.071 Sum_probs=112.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccc
Q 009914 126 SNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSK 205 (522)
Q Consensus 126 ~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (522)
++|+....+...+.++|.++..+.--.-.+.......+|++++.+.+++.++-.++..++-++-+....++++++.+...
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~~~ 81 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENSTL 81 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccccc
Confidence 55677777777788888877654422211111111256999999999888777776666543311111111111111010
Q ss_pred hhhhhhHHHHHHhhhhhcchhHHHHHHHhhhc--cchhH-HHHHHHHHHHHhC--C----Chh----HHHHHHHHHHHHH
Q 009914 206 SFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTG--SFPWS-ALSFAAMWLELTG--F----SHE----KTAFLMALFVIAS 272 (522)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~g--~----~~~----~~~~~~~~~~~~~ 272 (522)
.. ....+..+|++.-|..+...... ...+. ...+...+....+ . +.. .......+...+.
T Consensus 82 ~~-------~~s~~~~LK~K~tw~w~~~Yg~wLv~~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~ 154 (267)
T PF07672_consen 82 SK-------KPSYKSILKEKETWKWILIYGIWLVVVVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGY 154 (267)
T ss_pred cc-------cchHHHHHccchHHHHHHHHHHHheeEEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHH
Confidence 01 12334455655544433322222 11221 1122222222211 1 111 1122333334444
Q ss_pred hccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHH-hCCCCC-chhHHHHHHHHHHHHHHhccCCCcchhhh
Q 009914 273 SLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL-VLPDDP-STPVMHGLVLVVTGLFISWNAPATNNPIF 350 (522)
Q Consensus 273 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 350 (522)
.+|.+..|...+..-+|+ +.+...+.+.+.+.+...+.. ...... .....+.+..++.|++.-...+ +...+.
T Consensus 155 ~~G~~~ig~~nkt~~kRk----~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~-ViL~lP 229 (267)
T PF07672_consen 155 FLGPFTIGLWNKTNYKRK----PFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG-VILNLP 229 (267)
T ss_pred hhhceeeccchhhhhhhh----hHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH-HHhcCh
Confidence 566667777665433333 233333322222222222221 112111 1233355555666666555555 455555
Q ss_pred hhhc--CcchhHHHHHHHHHHHHHHhchhhHHHHHH
Q 009914 351 AEIV--PEKSRTSVYAMDRSFESILSSFAPPVVGIL 384 (522)
Q Consensus 351 ~~~~--~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l 384 (522)
.|.- .|++-|...|+...++++.-.+.-.+...+
T Consensus 230 hEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i 265 (267)
T PF07672_consen 230 HEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVI 265 (267)
T ss_pred hhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5542 456678888888888777666555554433
No 271
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.73 E-value=0.00017 Score=51.32 Aligned_cols=50 Identities=20% Similarity=0.234 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcC
Q 009914 241 WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARF 290 (522)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 290 (522)
.....++|.|+++.|+|+.+.|.+.++..+..+++.+++|+++||.++++
T Consensus 17 g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 17 GCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 34557899999999999999999999999999999999999999999984
No 272
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=97.57 E-value=0.0031 Score=58.24 Aligned_cols=167 Identities=13% Similarity=0.052 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCC-hhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALHTD-PTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAA 84 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s-~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~ 84 (522)
...+.+.+++++.....-++.+....+..+++-+ -.........-.....+..++.|...|+..|+|++...+.+-=++
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlS 106 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLS 106 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHH
Confidence 3445678888888888888888888777777643 334444444555566778888899999999999877765543222
Q ss_pred HH------HHHhh-h-----hHHHHHHHHHHHHHHhhhhHHH--HH--HHHhhcc----CCCchhHH---HHHHHHHHHH
Q 009914 85 TF------LVAFS-S-----TFAQVAISRALNGIGLALVAPA--IQ--SLVADST----DDSNRGVA---FGWLQLTSNI 141 (522)
Q Consensus 85 ~~------~~~~~-~-----~~~~l~~~r~l~G~~~~~~~~~--~~--~~i~~~~----~~~~r~~~---~~~~~~~~~l 141 (522)
.+ +..+. + +++.+..+.++.-...+...-. +. ..-.||. ..+.+... ++.....-..
T Consensus 107 v~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~ 186 (503)
T KOG2601|consen 107 VIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQS 186 (503)
T ss_pred HHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhh
Confidence 22 22222 2 4455544444433322221111 11 1122333 23444444 4666677777
Q ss_pred HHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHH
Q 009914 142 GSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVV 177 (522)
Q Consensus 142 g~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i 177 (522)
-.++.|++.|.+... .+-|..-.+.++-+++
T Consensus 187 tn~Lapv~tg~Iitf-----vsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 187 TNLLAPVITGLIITF-----VSLRASAGTFAAWALV 217 (503)
T ss_pred hhchhhhhhccccee-----echhhhhhhhHHHHHH
Confidence 889999999999877 5666644444444444
No 273
>PRK03612 spermidine synthase; Provisional
Probab=97.50 E-value=0.019 Score=57.95 Aligned_cols=165 Identities=13% Similarity=0.080 Sum_probs=97.2
Q ss_pred HHHHHHHHHHhhhhhhHHH-HHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHH-HHHHH-HHHHHHH
Q 009914 12 NLAGIMERADESLLPGVYK-EVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIAL-GAFLW-AAATFLV 88 (522)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~-~~~~~-~~~~~~~ 88 (522)
.+..++.++....+-.+.. .+...+|.+..+.+.+.+++..+..+++.+++++.++.-++....- ...+. .++..+.
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll 99 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALIL 99 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444333333332 3444578899999999999999999999999988744333322111 11111 1111111
Q ss_pred Hhhhh----H-HHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc-ccccCCC
Q 009914 89 AFSST----F-AQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP-MTFMGIP 162 (522)
Q Consensus 89 ~~~~~----~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~-~~~~~~~ 162 (522)
..... + ..++...++.++..|+..|....+..+.. .++-++..|.......+|.++|.++.+++.- . .
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~-----l 173 (521)
T PRK03612 100 YAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPR-----L 173 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHh-----c
Confidence 11111 1 12234455667788888888777766533 2235677899999999999999999887764 3 5
Q ss_pred CchHHHHHHHHHHHHHHHhh
Q 009914 163 GWRISFHIVGLISVVVGTLV 182 (522)
Q Consensus 163 gw~~~f~~~~~~~~i~~~~~ 182 (522)
|-....++.+.+.++++++.
T Consensus 174 G~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 174 GLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 65555555555555554433
No 274
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.43 E-value=0.0014 Score=58.88 Aligned_cols=314 Identities=14% Similarity=0.063 Sum_probs=170.9
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q 009914 43 LGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADS 122 (522)
Q Consensus 43 ~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 122 (522)
.|.+.-+-.+...+..+.+-.+.||+.--.=+.+..++.+.+.++.+++++.++-+.+..+..++.|.......++-+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~- 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR- 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-
Confidence 5677777778888888888889998754333444556677788888899999998888888888888777665555444
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCc--
Q 009914 123 TDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSD-- 200 (522)
Q Consensus 123 ~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-- 200 (522)
+++. ..+.+..+.+.++++|..--..+.+. -...-|...++...+.++.++..+++.++|+......-++.
T Consensus 143 Y~~~----~i~~WSSGTGgAGliGa~SYa~lT~~---~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~ 215 (409)
T KOG3880|consen 143 YPSI----VIAGWSSGTGGAGLIGASSYAFLTSW---ANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTE 215 (409)
T ss_pred CCCc----eeccccCCCCcchhhhhhHHHHHhhh---cCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccce
Confidence 3322 34555555666666666555555442 11566788888877777777777777666654332111000
Q ss_pred -----------cccc--chhhhhhHHHHHHhhhhhcchhHHHHHHHhhhccchhHHHH-HHHHHHH--HhCCCh---hHH
Q 009914 201 -----------QVSS--KSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSALS-FAAMWLE--LTGFSH---EKT 261 (522)
Q Consensus 201 -----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~g~~~---~~~ 261 (522)
.+.+ .......++.++..+.++ +.++-....+..-|.+.. ..+..+- ..|++. .|.
T Consensus 216 ~~~~~~~~~~a~e~~sv~s~~~~~~e~~~~i~pll-----~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqY 290 (409)
T KOG3880|consen 216 IIPSQYLPFEAAEEKSVPSRRLGLKETLKRIKPLL-----KYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQY 290 (409)
T ss_pred eccCCCCcccccccccCchhhhcHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcc
Confidence 0001 111122233333333322 222222222333232222 2333221 133332 234
Q ss_pred HHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhcc
Q 009914 262 AFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWN 341 (522)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 341 (522)
-+....+.++..+.+--.-..--+ .+....+..+.-+. ...+-.+....+..+++.+.++.-|+..|..
T Consensus 291 RwyqvlYQlGVFiSRSS~~~~~~p---------~l~~LailQ~vNl~--ff~~~a~~~ftpsi~ivf~lI~~EGLlGGas 359 (409)
T KOG3880|consen 291 RWYQVLYQLGVFISRSSINLFTMP---------YLWLLAILQFVNLL--FFLLQAWYWFTPSIWIVFALILFEGLLGGAS 359 (409)
T ss_pred hhhheeeeeeEEEEeccceEEech---------HHHHHHHHHHHHHH--HHHHHHHHHhccHHHHHHHHHHHHhhcCchH
Confidence 566666777666555332221111 01111111111111 1111111111345555667777778877776
Q ss_pred CCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHH
Q 009914 342 APATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 381 (522)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~ 381 (522)
+. ..+--+.+..+++.|--+++.....-.+|..++..++
T Consensus 360 YV-NTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 360 YV-NTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HH-HHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 66 5556666767789999999888877776666555543
No 275
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.30 E-value=0.0019 Score=63.86 Aligned_cols=153 Identities=13% Similarity=0.103 Sum_probs=111.3
Q ss_pred CChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHHHH
Q 009914 38 TDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS----------STFAQVAISRALNGIG 107 (522)
Q Consensus 38 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~l~G~~ 107 (522)
.++...|.+..+..++..++..+..++.-+..-|+++..+.++.++..+.-... ++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 889999999988899999999999888888888998888777766655432211 2222233445666666
Q ss_pred hhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccc---CCCCchHHHHHHHHHHHHHHHhhhh
Q 009914 108 LALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFM---GIPGWRISFHIVGLISVVVGTLVRL 184 (522)
Q Consensus 108 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~---~~~gw~~~f~~~~~~~~i~~~~~~~ 184 (522)
....+.+...++++..|+..-+..++++....++|..++..++..+.+...- +..+-.+..++..+..++...+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 6777778889999999999999999999999999999999999988765311 1123345555666666555666656
Q ss_pred ccCCCC
Q 009914 185 FANDPH 190 (522)
Q Consensus 185 ~~~~~~ 190 (522)
+|++.+
T Consensus 412 Lp~~~~ 417 (433)
T PF03092_consen 412 LPPQKR 417 (433)
T ss_pred cCCCch
Confidence 665433
No 276
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.08 E-value=8.9e-05 Score=74.80 Aligned_cols=134 Identities=9% Similarity=-0.048 Sum_probs=2.7
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHH--HHhCCC-----
Q 009914 247 AAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL--LLVLPD----- 319 (522)
Q Consensus 247 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----- 319 (522)
++.+=++++++..+.|++.+.+-++.++..++..++.+|..|.+ ++....+++++...... -+....
T Consensus 26 lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrpr------wig~g~~~~~~g~~l~~lPhf~~~~y~~~~ 99 (539)
T PF03137_consen 26 LTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPR------WIGIGALLMGLGSLLFALPHFLSGPYSYEE 99 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc------eeeecHHHHHHHHHHHhccHhhcCCCcccc
Confidence 34444579999999999999999999999999888887744332 12111111111111100 000000
Q ss_pred -------------------------------------CCchhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHH
Q 009914 320 -------------------------------------DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSV 362 (522)
Q Consensus 320 -------------------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (522)
......++++..++.|+|....++ +..+++-|.++++..+..
T Consensus 100 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t-LG~tYiDDnv~~~~splY 178 (539)
T PF03137_consen 100 ASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT-LGITYIDDNVSKKNSPLY 178 (539)
T ss_dssp ----------------------------------------------------SSS-------------------------
T ss_pred ccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc-ceeeeeccccccccCccc
Confidence 000124556677888888888888 899999999999999999
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 363 YAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 363 ~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
.|+..++..+|-++|-.++|...+.
T Consensus 179 iGi~~~~~~lGPa~Gf~lg~~~L~~ 203 (539)
T PF03137_consen 179 IGILYAMSILGPALGFLLGSFCLRI 203 (539)
T ss_dssp -------------------------
T ss_pred hhhhhHHhhccHHHHHHHHHHHHhc
Confidence 9999999999988888888888766
No 277
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.92 E-value=0.089 Score=51.45 Aligned_cols=146 Identities=13% Similarity=0.099 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHH
Q 009914 9 VLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLV 88 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~ 88 (522)
+...++..+-++..-.+......+...-|.++..+|..-+...+....+.+...++.+|+|..|.-+++...-.++..++
T Consensus 261 flas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~ 340 (432)
T PF06963_consen 261 FLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALC 340 (432)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHH
Confidence 34444444444444445666666666779999999999999999999999999999999998887666665443332222
Q ss_pred H---hh---h----hHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009914 89 A---FS---S----TFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMA 154 (522)
Q Consensus 89 ~---~~---~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~ 154 (522)
. +. + +...++.+-++.=+|.=.+.....-++.|..|+++|+...|.-.+..++--++-..++-.+.
T Consensus 341 v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 341 VVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 2 11 1 33444555555556666677788899999999999999999999999988888877765443
No 278
>PRK03612 spermidine synthase; Provisional
Probab=96.91 E-value=0.06 Score=54.41 Aligned_cols=130 Identities=15% Similarity=0.111 Sum_probs=72.9
Q ss_pred HhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHH-HHHHHHHHHHhCCCCCchhHHHHHHH
Q 009914 253 LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLS-AIPLAALLLLVLPDDPSTPVMHGLVL 331 (522)
Q Consensus 253 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (522)
-+|-+....+.+.+++.++..+|+.+++++.++..++ .....+.+.+ +.....+...................
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~------~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~ 117 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG------FVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLV 117 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688888888888888888888888887776433322 1111111111 11111111111111111112233445
Q ss_pred HHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhC
Q 009914 332 VVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 390 (522)
Q Consensus 332 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g 390 (522)
++.++..|...| ....+..+.. .+..+...|-......+|+.+|+.+.+++.--..|
T Consensus 118 ~~~~~l~G~~~P-l~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG 174 (521)
T PRK03612 118 LLIGLLIGMEIP-LLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLG 174 (521)
T ss_pred HHHHHHHHHHHH-HHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcc
Confidence 566777777666 4444433322 23456778888999999999999999988764355
No 279
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.81 E-value=0.06 Score=52.67 Aligned_cols=145 Identities=16% Similarity=0.154 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHH---HHhcCCChh-hhHHHHHHHHHHHHhhhhhHHHHHH---HhchhHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEV---GAALHTDPT-GLGSLTLFRSIVQASCYPIAAYLAI---RHNRAHVIALGAFL 80 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~s~~-~~g~~~s~~~~~~~i~~~~~G~l~D---r~grr~~l~~~~~~ 80 (522)
++.+....+..+.....+....|.- ....+.+.. ..+...-...++..++..+.+.+.+ |+||++.+.++..+
T Consensus 242 ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~ 321 (461)
T KOG3098|consen 242 MLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIII 321 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHH
Confidence 3444455555555555544444432 222233322 2333333444555555666666665 47899999999888
Q ss_pred HHHHHHHHHhh------------------hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHH
Q 009914 81 WAAATFLVAFS------------------STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIG 142 (522)
Q Consensus 81 ~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg 142 (522)
..++.++.-+. +++...++..++.|++.+......+.++...+ +++|..+.++...-..++
T Consensus 322 ~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~ 400 (461)
T KOG3098|consen 322 HLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVA 400 (461)
T ss_pred HHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHH
Confidence 88877776543 23566788889999999999999999999999 677899999999888888
Q ss_pred HHHHHHHHHhh
Q 009914 143 SLVGGLFSVVM 153 (522)
Q Consensus 143 ~~~g~~l~~~l 153 (522)
..++.......
T Consensus 401 s~v~~f~~~~~ 411 (461)
T KOG3098|consen 401 SCVAFFFSPYL 411 (461)
T ss_pred HHHHhhhhhhh
Confidence 87776655444
No 280
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.80 E-value=0.079 Score=43.69 Aligned_cols=110 Identities=9% Similarity=-0.004 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCchhHHHHHHHHHHHHHHhcc
Q 009914 262 AFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWN 341 (522)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 341 (522)
-.-.++......++.++.+.+.+++|.|+ .+... ...-.+ -....+ ..+.+.++....+.|++.+..
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~-----sm~lg-~~~y~~--y~~~~~-----~~~~~~l~~~s~l~G~~~a~l 106 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKW-----SMILG-SLGYAI--YIASFF-----YPNSYTLYPASALLGFGAALL 106 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHH-----HHHHH-HHHHHH--HHHHHH-----hhhHHHHHHHHHHHhhhhHHh
Confidence 34445556666777788899999999983 11111 111111 111111 133455778888999999988
Q ss_pred CCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHH
Q 009914 342 APATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 385 (522)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~ 385 (522)
.. ..-.++.+...++.+++..|+...+.+.+..+|..+.-.+.
T Consensus 107 W~-aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 107 WT-AQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hH-hhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88 77788999999999999999999999988777777655443
No 281
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.71 E-value=0.067 Score=48.95 Aligned_cols=139 Identities=11% Similarity=0.092 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH
Q 009914 7 TLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~ 86 (522)
.+..+..+..+..........+......++| .++ .....+..+..+.+.+.+..++|-|.++.++...+.....
T Consensus 30 nv~i~s~~fl~~f~a~~gl~nlq~~vn~~lg----~~s--l~~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA 103 (390)
T KOG3097|consen 30 NVLILSIAFLLTFTAYLGLQNLQTSVNYDLG----TVS--LGALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA 103 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhcCcc----cch--hhhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4455555555544443333333333322333 122 1223344455566666999999999999988877654322
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCC--Cch---------hHHHHHHHHHHHHHHHHHHHHHHh
Q 009914 87 LVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDD--SNR---------GVAFGWLQLTSNIGSLVGGLFSVV 152 (522)
Q Consensus 87 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~r---------~~~~~~~~~~~~lg~~~g~~l~~~ 152 (522)
.-+-+.+..++-.-...|++.+..+..--+++++.-.. +.| .+..+.+.+...-+...|..++..
T Consensus 104 -~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issl 179 (390)
T KOG3097|consen 104 -ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSL 179 (390)
T ss_pred -hhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHH
Confidence 22336788889999999999998887666666554432 223 345565555555555555444443
No 282
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.47 E-value=0.059 Score=51.78 Aligned_cols=112 Identities=11% Similarity=0.105 Sum_probs=80.1
Q ss_pred ChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHH--HHH---HHHHHHHhhhhHHHHHHHHHHHHHHhhhhHH
Q 009914 39 DPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAF--LWA---AATFLVAFSSTFAQVAISRALNGIGLALVAP 113 (522)
Q Consensus 39 s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~--~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 113 (522)
...+.-+...++.+|..++.--...+ |+ |++.+.+.+ +.. +.....-+.++.|.+++.-+..|+..|..++
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 34566677777777766654332211 33 333222222 211 2222233467899999999999999999999
Q ss_pred HHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009914 114 AIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMA 154 (522)
Q Consensus 114 ~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~ 154 (522)
.....+.+..++++|..+++....+.++|..++.+++-.+-
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887764
No 283
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.15 E-value=0.17 Score=47.18 Aligned_cols=131 Identities=19% Similarity=0.293 Sum_probs=85.3
Q ss_pred HHHHHHHHhCCCh--hHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCch
Q 009914 246 FAAMWLELTGFSH--EKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPST 323 (522)
Q Consensus 246 ~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (522)
..+.+..+.+.+. ...++......+...++.++.|++.||.|+|+ ........ ............. ..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-----~~~~~~~~---~~~~~~~~~~~~~--~~ 93 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRK-----VLIIGLLL---FLLGTLLLALAPN--VG 93 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchH-----HHHHHHHH---HHHHHHHHHhCcc--ch
Confidence 4555666665555 46788888888888888899999999997772 22222211 1111111111111 23
Q ss_pred hHHHHHHHHHHHHHHhccCCCcchhhhhhhcCc-chhHHHHHHHHH-HHHHHhchhhHHHHHHHHH
Q 009914 324 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPE-KSRTSVYAMDRS-FESILSSFAPPVVGILAQH 387 (522)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~-~~~~~~~i~~~~~g~l~~~ 387 (522)
.+.........|++.+...+ ...+++.+..|+ +.++...+.... ...++..++|.+.+.+...
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLP-VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHH-HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455557777776666 788999999987 678888888888 5677778888777766655
No 284
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.10 E-value=0.53 Score=46.54 Aligned_cols=34 Identities=9% Similarity=-0.059 Sum_probs=21.7
Q ss_pred hhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcch
Q 009914 323 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKS 358 (522)
Q Consensus 323 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 358 (522)
..+..++..++.|++.+.... ....+.+ .+|++.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~-s~~gla~-~fp~~~ 138 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQG-SLFGLAG-VFPSTY 138 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcc-cchhhcc-cCCHHH
Confidence 344556667778888887777 5666655 456443
No 285
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.04 E-value=0.05 Score=55.98 Aligned_cols=139 Identities=12% Similarity=0.018 Sum_probs=91.5
Q ss_pred HHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHH-HHHHHHHHHH-------HH----HhCC-
Q 009914 252 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQIS-SLSAIPLAAL-------LL----LVLP- 318 (522)
Q Consensus 252 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~----~~~~- 318 (522)
++++++..+.|++...+-++..+..++..+...|..|.+..-....+..+. ++..++=... .. ...+
T Consensus 125 rRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~ 204 (735)
T KOG3626|consen 125 RRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPS 204 (735)
T ss_pred hhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCc
Confidence 358999999999999888888888888888877765543211111111111 1111110000 00 0000
Q ss_pred -------------------------CCCc--hhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHH
Q 009914 319 -------------------------DDPS--TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFES 371 (522)
Q Consensus 319 -------------------------~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (522)
...+ .+.++++..++.|+|....++ ...+++-|.+.+++.....|+..++..
T Consensus 205 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t-lGisYiDDnvk~~~SplYlgi~~~~~~ 283 (735)
T KOG3626|consen 205 SSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT-LGISYIDDNVKKKNSPLYLGILYSMAI 283 (735)
T ss_pred cccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc-CCCccccccccccCCcHHHHHHHHHHH
Confidence 0001 233566777888998888888 899999999999999999999999999
Q ss_pred HHhchhhHHHHHHHHHhhCc
Q 009914 372 ILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 372 ~~~~i~~~~~g~l~~~~~g~ 391 (522)
+|-++|-.+++++......+
T Consensus 284 lGPaiGfllgS~~l~lYvD~ 303 (735)
T KOG3626|consen 284 LGPAIGFLLGSFCLKLYVDF 303 (735)
T ss_pred hhhHHHHHHHHHHHHeeecc
Confidence 99999988888888774343
No 286
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.02 E-value=0.013 Score=56.09 Aligned_cols=133 Identities=17% Similarity=0.139 Sum_probs=85.7
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhH----hhhcCCCchhHHHHHHHHHHHHHHHHHHHH----
Q 009914 244 LSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF----LSARFPNSGRIILAQISSLSAIPLAALLLL---- 315 (522)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 315 (522)
.++++.|+++.|.+....+.+.....+.+++.+++.|..+|| +|||||. +. ..+..+.+.+..+.+.
T Consensus 52 lsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPf----I~-~~s~~i~~~l~Lig~aaDig 126 (498)
T KOG0637|consen 52 LSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPF----IL-AGSLLIAVSLFLIGYAADIG 126 (498)
T ss_pred hccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccch----HH-HhhHHHHHHHhhhhhHhhhh
Confidence 468999999999999999999999999999999999999996 5677653 22 1122222111111111
Q ss_pred -hCCCCCch------hHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHH-HHHHHHHHHHHHhchhhHHHH
Q 009914 316 -VLPDDPST------PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTS-VYAMDRSFESILSSFAPPVVG 382 (522)
Q Consensus 316 -~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~i~~~~~g 382 (522)
.+...... ..+.++.+.+.=+....... ..-++..|+..++.+.+ +++....+..+|+.+|-.+++
T Consensus 127 ~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qg-p~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 127 LLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQG-PCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhh-hHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 11111111 11222233333345545555 67899999987777777 999999888888888766655
No 287
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.93 E-value=0.37 Score=47.82 Aligned_cols=125 Identities=15% Similarity=0.118 Sum_probs=75.4
Q ss_pred ChhHHHHHHHHHHHHHhcc-chhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCc-------------
Q 009914 257 SHEKTAFLMALFVIASSLG-GLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS------------- 322 (522)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~-~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 322 (522)
+.+...++.....+...+. .++.+++++|+++++ +.......... .+........+....
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~-----lf~~~~~~F~~-~f~lF~~vl~p~~~~~~p~~~~~~~~~~ 114 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEA-----LFYTVISPFLG-FFALFAFVIYPLSDLLHPTALADKLLSL 114 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH-----hHHHHHHHHHH-HHHHHHHHHhcchhhcCCcHHHHHHHhh
Confidence 3456677776665655555 788999999999984 33322222222 222222222222111
Q ss_pred ------------hhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 323 ------------TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 323 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
..|...+......+.......-..++++.|.+..++..+.+++....+++|..+++.+..++.+.
T Consensus 115 ~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~ 191 (472)
T TIGR00769 115 LPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKL 191 (472)
T ss_pred cchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 01222223333333222222115789999999999999999999999999999999998887754
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.37 E-value=0.0032 Score=59.19 Aligned_cols=113 Identities=13% Similarity=0.063 Sum_probs=3.4
Q ss_pred HHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHh-----CCCCCchhHHHHHHHHHHHHH
Q 009914 263 FLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV-----LPDDPSTPVMHGLVLVVTGLF 337 (522)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~ 337 (522)
..+..+.++-.+|+.+.++..-+..+++ .+....+.=+..+++..++-.. .+..-++.+..++..+++|+.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~----~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~T 261 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPR----WLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFT 261 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccc----cHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHc
Confidence 3455788899999998876432211121 1111111111112222222111 001112334467788899999
Q ss_pred HhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHH
Q 009914 338 ISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPV 380 (522)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~ 380 (522)
.|.... ..+.+..+.+++++|..+-.+......+|-.+|..+
T Consensus 262 NGyl~t-l~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 262 NGYLST-LAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp -----H-HHH---------------------------------
T ss_pred cchhhh-ceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888 888888898888888777666666666665655544
No 289
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.14 E-value=0.35 Score=46.69 Aligned_cols=129 Identities=16% Similarity=0.098 Sum_probs=81.7
Q ss_pred HHHHHHHH-H-hCCChhHHHHHHHH-HHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 009914 245 SFAAMWLE-L-TGFSHEKTAFLMAL-FVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDP 321 (522)
Q Consensus 245 ~~~~~~~~-~-~g~~~~~~~~~~~~-~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (522)
.++..|+. . .|++..+...-... ..=..+...+....+.|.++-|. .++......+.. -.++++ .
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykp-----viil~~~~~i~t--~~lll~-----~ 91 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKP-----VIILQALSYIIT--WLLLLF-----G 91 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhH-----HHHHHHHHHHHH--HHHHHH-----H
Confidence 46666664 3 78888876543333 22344445567778889988873 222222111111 111111 2
Q ss_pred chhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 322 STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
......-+.-+..|++.+.-.. .++++-..+|+++.-++.+......-+|..++..++-.+...
T Consensus 92 ~sv~~mq~~q~~yg~~~a~eva--y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~ 155 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATAAEVA--YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF 155 (412)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH--HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444466777888887776444 678888888999999999999988888888888777766664
No 290
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.98 E-value=0.74 Score=44.16 Aligned_cols=36 Identities=8% Similarity=0.030 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHH
Q 009914 324 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTS 361 (522)
Q Consensus 324 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (522)
.+..+....+.+++.+.... ..+...++. |+++...
T Consensus 117 f~vt~~~vv~~~~a~a~~qg-s~~G~a~~~-P~~ytqa 152 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQG-SLYGLAGLF-PSEYTQA 152 (406)
T ss_pred HHHHHHHHHHHhhhhhhhcc-chhhhhhcC-CHHHHHH
Confidence 34455666677777777776 566665554 5554433
No 291
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.81 E-value=0.23 Score=35.85 Aligned_cols=49 Identities=14% Similarity=0.243 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhc
Q 009914 241 WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSAR 289 (522)
Q Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~ 289 (522)
+.+...+|...++.++|..+.+++.+...++.++|.+...++.++.+++
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~ 57 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR 57 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 3445578888899999999999999999999999999999888875544
No 292
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=93.75 E-value=3.6 Score=38.37 Aligned_cols=143 Identities=14% Similarity=0.085 Sum_probs=84.2
Q ss_pred cCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchh-HH---HHHHHHHHHHHHHHH-Hhh----hhHHHHHHHHHHHHH
Q 009914 36 LHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRA-HV---IALGAFLWAAATFLV-AFS----STFAQVAISRALNGI 106 (522)
Q Consensus 36 ~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr-~~---l~~~~~~~~~~~~~~-~~~----~~~~~l~~~r~l~G~ 106 (522)
+|-+.-|.+.+.+.+...+.+++...-++.|.--.- .+ +++|++.-.-..+++ .|+ ++-+.+++..++.|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 466778899999999999999888887777643322 21 223332221111222 222 466788889999999
Q ss_pred HhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhh
Q 009914 107 GLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRL 184 (522)
Q Consensus 107 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~ 184 (522)
-.|...|..+.++..-. .+.....+.....-.+|.+.+.++-.++.-. ..|---.-...|.+.++.++...+
T Consensus 118 LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP----~LGl~rta~laG~~Nl~aAvv~~f 189 (508)
T COG4262 118 LVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLP----RLGLVRTAALAGLCNLAAAVVTLF 189 (508)
T ss_pred HHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhh----hhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988722 2222233333444666777666665554421 033333333445555555544443
No 293
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=92.94 E-value=0.29 Score=47.54 Aligned_cols=65 Identities=23% Similarity=0.217 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHhccCCCcchhhhhhhcCcc---hhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 325 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK---SRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 325 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
..+.+.++++++|.|..-+ ...++..|.++++ .+.+....+....++|..+++.+.+++-++ .||
T Consensus 34 ~~~~~gL~lia~G~G~~K~-ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~-~~~ 101 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKP-NISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQN-YGW 101 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHH-HHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC-S-H
T ss_pred HHHHHHHHHHHhccccccc-cHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccc-cch
Confidence 4467788889999999999 8899999999765 456677888889999999999999999887 565
No 294
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.70 E-value=0.0053 Score=53.70 Aligned_cols=64 Identities=13% Similarity=0.095 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHH---------HHHhchhHH
Q 009914 10 LVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYL---------AIRHNRAHV 73 (522)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l---------~Dr~grr~~ 73 (522)
....+.+.+-+..+.+...+-.+.++.|.++.....++.+..+..++..++.|.. .||+|||+.
T Consensus 21 ~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 21 AYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred eechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 3456677777777777777777778889999888899999999999999998754 578998875
No 295
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.64 E-value=2.2 Score=38.33 Aligned_cols=136 Identities=16% Similarity=0.109 Sum_probs=86.4
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHhchh--HHHHHHHHHHHHHHHHHHhh----h---hHHHHHHHHHHHHHHhhhhHH
Q 009914 43 LGSLTLFRSIVQASCYPIAAYLAIRHNRA--HVIALGAFLWAAATFLVAFS----S---TFAQVAISRALNGIGLALVAP 113 (522)
Q Consensus 43 ~g~~~s~~~~~~~i~~~~~G~l~Dr~grr--~~l~~~~~~~~~~~~~~~~~----~---~~~~l~~~r~l~G~~~~~~~~ 113 (522)
-|.+.+.++++.++++-+..++..|-..| ..+.+..++.++...+..+. | +...-+++-.+.-.+.|.++|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 58999999999999999998888875543 34555555544444333322 2 222224555566667789999
Q ss_pred HHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-cccCCCCchHHHHHHHHHHHHHHHhhhh
Q 009914 114 AIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM-TFMGIPGWRISFHIVGLISVVVGTLVRL 184 (522)
Q Consensus 114 ~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~-~~~~~~gw~~~f~~~~~~~~i~~~~~~~ 184 (522)
....+-.++.|++.|+..+.++..-.++=..+ .+... ...-..+-|..|-+..+...+..+....
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvCl------vLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~~ 429 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCL------VLYNLHVDAFPTTTRNMFGICSAFLFVASILQRR 429 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhh------hheecccccCccccchhhhhhHHHHHHHHHHHHH
Confidence 99999999999999999888876544332221 12221 0111145677888777766666555443
No 296
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=92.33 E-value=3.7 Score=42.11 Aligned_cols=145 Identities=19% Similarity=0.066 Sum_probs=81.4
Q ss_pred HHHHHHH-HHhCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhcCCCchhHHHHHHHHHHHHHH---HHHHHHhCCC-
Q 009914 245 SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPL---AALLLLVLPD- 319 (522)
Q Consensus 245 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~- 319 (522)
.-+-.|+ .+++.+...+...............+++++++|.+--|... +.........+... ........+.
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~t---I~~~s~i~~~G~~~lt~~a~~~~l~p~~ 134 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFT---INIGSLISLLGLFGLTLSAMIPALLPFM 134 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 3344444 46777777777777777777777788999999987555210 11111111111111 1111111110
Q ss_pred -----C------Cc--hhHHHHHHHHHHHHHHhccCCCcchhhhhhhcCcc----hh--HHHHHHHHHHHHHHhchhhHH
Q 009914 320 -----D------PS--TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK----SR--TSVYAMDRSFESILSSFAPPV 380 (522)
Q Consensus 320 -----~------~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~g~~~~~~~~~~~i~~~~ 380 (522)
. +. ....+...+.+..+|.+..-+ ...++-.|.++.. .+ ...+.......++|..++-.+
T Consensus 135 ~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~-~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~ 213 (571)
T KOG1237|consen 135 CKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRP-CLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTV 213 (571)
T ss_pred ccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCC-cchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHH
Confidence 0 01 123455566667778888788 8888888888722 22 245666667777777777777
Q ss_pred HHHHHHHhhCcccC
Q 009914 381 VGILAQHVYGFKPI 394 (522)
Q Consensus 381 ~g~l~~~~~g~~~~ 394 (522)
.-++-+. .||...
T Consensus 214 ~vyiq~~-~~w~lg 226 (571)
T KOG1237|consen 214 LVYIQDN-VGWKLG 226 (571)
T ss_pred HHhhhhc-ccceee
Confidence 6666565 566443
No 297
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=90.49 E-value=0.54 Score=45.90 Aligned_cols=14 Identities=7% Similarity=-0.145 Sum_probs=7.2
Q ss_pred hccchhhhhhhhHh
Q 009914 273 SLGGLFGGRMGDFL 286 (522)
Q Consensus 273 ~~~~~~~g~l~~~~ 286 (522)
++..+..|++..|+
T Consensus 9 i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 9 IFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHh
Confidence 33444555665554
No 298
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=89.68 E-value=3.7 Score=39.04 Aligned_cols=65 Identities=15% Similarity=0.120 Sum_probs=40.3
Q ss_pred hhHHHHHHHhhhccchhHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhccchhhhhhhh-----HhhhcCC
Q 009914 225 PSFQIIVAQGVTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGD-----FLSARFP 291 (522)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~-----~~~~~~~ 291 (522)
+.+..++..........+...-+|.+++..|.|-.+.+.+.....=.. --+++..+.| |+||||.
T Consensus 31 ~~illLl~LYllQGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~s--LKllWaPiVDs~y~k~~Grrks 100 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPFS--LKLLWAPIVDSVYSKRFGRRKS 100 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHHH--HHHHHHhhhHHHHHHhhccccc
Confidence 344556666667777777777889999876777665555444332111 1345556666 9999964
No 299
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=87.49 E-value=12 Score=38.15 Aligned_cols=28 Identities=14% Similarity=0.294 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhccchhhhhhhhHhhhcC
Q 009914 263 FLMALFVIASSLGGLFGGRMGDFLSARF 290 (522)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 290 (522)
.....+.+.+.+++..++++...++.++
T Consensus 301 ~~i~~y~~~~~iaGy~S~~~yk~~~g~~ 328 (521)
T PF02990_consen 301 AAIILYALTSFIAGYVSARLYKSFGGKK 328 (521)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCCCc
Confidence 3344455555666666666666666553
No 300
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=86.92 E-value=3.1 Score=38.18 Aligned_cols=110 Identities=10% Similarity=0.071 Sum_probs=76.4
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHhchhHH---HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHH
Q 009914 42 GLGSLTLFRSIVQASCYPIAAYLAIRHNRAHV---IALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSL 118 (522)
Q Consensus 42 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~---l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 118 (522)
|.-|....+.+|..+..--.-..- ...-+. +-.-.+++.+......+.++++..++.-+.-|+-.|..++...--
T Consensus 289 qYRwyqvlYQlGVFiSRSS~~~~~--~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~ 366 (409)
T KOG3880|consen 289 QYRWYQVLYQLGVFISRSSINLFT--MPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHN 366 (409)
T ss_pred cchhhheeeeeeEEEEeccceEEe--chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHH
Confidence 466777777766554322111100 001111 222233444555566778999999999999999888888888888
Q ss_pred HhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 119 VADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 119 i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
+.+-.++++|-.+++......++|..++.+++-.+
T Consensus 367 i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 367 IHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 88888899999999999999999999888877655
No 301
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=86.09 E-value=35 Score=33.90 Aligned_cols=43 Identities=16% Similarity=0.067 Sum_probs=37.2
Q ss_pred cchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 345 TNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
..+..+.|.+..++..+.+++.+...+++..++..+..++..+
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4678889999999999999999999999988888888877764
No 302
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=83.20 E-value=52 Score=32.84 Aligned_cols=10 Identities=30% Similarity=0.265 Sum_probs=5.1
Q ss_pred HhCCChhHHH
Q 009914 253 LTGFSHEKTA 262 (522)
Q Consensus 253 ~~g~~~~~~~ 262 (522)
+.|.++....
T Consensus 261 ~tG~~~~~~~ 270 (518)
T KOG2568|consen 261 STGMSPKVYT 270 (518)
T ss_pred ccCCCchhHH
Confidence 4566554433
No 303
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=82.62 E-value=32 Score=30.03 Aligned_cols=32 Identities=9% Similarity=0.182 Sum_probs=19.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 125 DSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 125 ~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
++++.+.-.......-++..+|..+++.+...
T Consensus 157 ~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~ 188 (209)
T PF06912_consen 157 GKDRALRRALRYLLIILSFFIGAILGALLYRR 188 (209)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444555566666777777777777665
No 304
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=81.89 E-value=43 Score=30.95 Aligned_cols=73 Identities=27% Similarity=0.226 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHH---hchhHHHHHHHHHHHHH
Q 009914 8 LVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIR---HNRAHVIALGAFLWAAA 84 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr---~grr~~l~~~~~~~~~~ 84 (522)
.+.+.+++++.-+..+...-.+..+.+..+......++..+...... +.+-.++ ||.||.=+++....++.
T Consensus 27 ~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~------a~r~~~~~~TfGy~R~eiLaa~~nav~ 100 (296)
T COG1230 27 ALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKL------ARRPATKRFTFGYKRLEILAAFLNALL 100 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCccHhHHHHHHHHHHHHH
Confidence 33444444444444455555666777777776666666555433322 2222332 78888755555444444
Q ss_pred HH
Q 009914 85 TF 86 (522)
Q Consensus 85 ~~ 86 (522)
.+
T Consensus 101 Li 102 (296)
T COG1230 101 LI 102 (296)
T ss_pred HH
Confidence 33
No 305
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=79.78 E-value=0.71 Score=43.42 Aligned_cols=108 Identities=14% Similarity=0.079 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHH---HHHHH----------hhhhHHHHHHHHHHHHHHhhhh
Q 009914 45 SLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAA---TFLVA----------FSSTFAQVAISRALNGIGLALV 111 (522)
Q Consensus 45 ~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~---~~~~~----------~~~~~~~l~~~r~l~G~~~~~~ 111 (522)
.+..+++++..+|....++..=+..+++.+.+..+.-.+. .+++. +.+|-+..++..++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 3566788888888887776421111333333333322222 22221 1234466678889999999999
Q ss_pred HHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 009914 112 APAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVV 152 (522)
Q Consensus 112 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~ 152 (522)
......+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888888888888888888776543
No 306
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=77.10 E-value=22 Score=33.59 Aligned_cols=96 Identities=20% Similarity=0.210 Sum_probs=73.8
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHhchhH--HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHh
Q 009914 43 LGSLTLFRSIVQASCYPIAAYLAIRHNRAH--VIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVA 120 (522)
Q Consensus 43 ~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 120 (522)
-|..-++..+..+++++..|.+--++.|.. .+.++.+..+...+++..+.+.|..+++.++...-.....+.+..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 366677778888889999999987776653 355555555566666777788999999888888888888888888888
Q ss_pred hccCCCchhHHHHHHHHH
Q 009914 121 DSTDDSNRGVAFGWLQLT 138 (522)
Q Consensus 121 ~~~~~~~r~~~~~~~~~~ 138 (522)
+....+.-|..+|+....
T Consensus 353 ~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFV 370 (433)
T ss_pred HhhhhhhheeeeehHHHH
Confidence 888888778777776543
No 307
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=74.97 E-value=30 Score=28.27 Aligned_cols=80 Identities=20% Similarity=0.301 Sum_probs=48.4
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHHh-----------hhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHH
Q 009914 63 YLAIRHNRAHVIALGAFLWAAATFLVAF-----------SSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVA 131 (522)
Q Consensus 63 ~l~Dr~grr~~l~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 131 (522)
.++||.-||-.+..|.-. +++...+.+ .+++..+++...+.|+|. ....+..++...++++.|..
T Consensus 56 ~Vs~RM~rRm~~~~GiP~-~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSl 131 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPT-ALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSL 131 (153)
T ss_pred HHHHHHHHHHHHHhchHH-HHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCc
Confidence 457888666655544322 222221111 145556666666666543 33456677777788888999
Q ss_pred HHHHHHHHHHHHHHH
Q 009914 132 FGWLQLTSNIGSLVG 146 (522)
Q Consensus 132 ~~~~~~~~~lg~~~g 146 (522)
+|+-.+-.+++-+.-
T Consensus 132 lG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 132 LGWEEFKRNWGRMWE 146 (153)
T ss_pred ccHHHHHHhHHHHHH
Confidence 999998888876643
No 308
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.76 E-value=17 Score=27.30 Aligned_cols=30 Identities=7% Similarity=-0.209 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHh-chhHH
Q 009914 44 GSLTLFRSIVQASCYPIAAYLAIRH-NRAHV 73 (522)
Q Consensus 44 g~~~s~~~~~~~i~~~~~G~l~Dr~-grr~~ 73 (522)
++-.+.-.++..+.....||+.||| |.+++
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 4455667777777788889999996 44444
No 309
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.43 E-value=22 Score=26.78 Aligned_cols=36 Identities=22% Similarity=0.141 Sum_probs=29.5
Q ss_pred cchhHHHHHHHHHHHHHHhchhhHHHHHHHHHhhCc
Q 009914 356 EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 391 (522)
Q Consensus 356 ~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~~~g~ 391 (522)
++.++.+.++-...-.+++.+.....||+.|+..|.
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agT 72 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 456777888888888889999999999999997664
No 310
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=66.98 E-value=15 Score=29.99 Aligned_cols=45 Identities=13% Similarity=-0.034 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhc
Q 009914 327 HGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSS 375 (522)
Q Consensus 327 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 375 (522)
++..+.++|.+... +.+.+++...+++..|+..|+-.+-.+++..
T Consensus 100 ~~~S~~~Fg~gllG----isYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 100 LLVSLVFFGLGLLG----ISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HHHHHHHHHHHHHh----hhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 44444444444331 3566677788888899999998887776543
No 311
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=65.25 E-value=72 Score=30.69 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=22.4
Q ss_pred hhHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 009914 358 SRTSVYAMDRSFESILSSFAPPVVGILAQH 387 (522)
Q Consensus 358 ~~~~~~g~~~~~~~~~~~i~~~~~g~l~~~ 387 (522)
......+.....-.....+.|.+.|.+...
T Consensus 172 ~lt~mnatir~iDq~tn~Lapv~tg~Iitf 201 (503)
T KOG2601|consen 172 VLTNMNATIRGIDQSTNLLAPVITGLIITF 201 (503)
T ss_pred HHhhcchhhhhhhhhhhchhhhhhccccee
Confidence 334444666667777889999999999887
No 312
>PF11770 GAPT: GRB2-binding adapter (GAPT); InterPro: IPR021082 This entry represents a family of transmembrane proteins which bind the growth factor receptor-bound protein 2 (GRB2) in B cells []. In contrast to other transmembrane adaptor proteins, GAPT, which this entry represents, is not phosphorylated upon BCR ligation. It associates with GRB2 constitutively through its proline-rich region [].
Probab=63.46 E-value=7.1 Score=31.11 Aligned_cols=11 Identities=18% Similarity=0.371 Sum_probs=5.0
Q ss_pred ccceeeccccc
Q 009914 486 NRTVIEMDYDY 496 (522)
Q Consensus 486 ~~~~~~~~~~~ 496 (522)
.+.....+|++
T Consensus 86 ~~~~i~~NYEN 96 (158)
T PF11770_consen 86 KENNIHDNYEN 96 (158)
T ss_pred cCCccccchhh
Confidence 34444445544
No 313
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=62.93 E-value=1.2e+02 Score=27.48 Aligned_cols=62 Identities=13% Similarity=-0.002 Sum_probs=38.2
Q ss_pred HHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHH
Q 009914 106 IGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLI 174 (522)
Q Consensus 106 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~ 174 (522)
...|.-+....+++.+..|+++|.|+.-+--.+.-+=-++--..+.++.+. |.+.+.+.+..
T Consensus 28 ~vL~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~l-------~~~l~~~fg~~ 89 (254)
T COG0861 28 IVLGIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLTL-------TQPLLYIFGLY 89 (254)
T ss_pred HHHHhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hHHHHHHHHHH
Confidence 345667777889999999988776665443333333334444555666653 56666664443
No 314
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=62.89 E-value=1.8e+02 Score=29.49 Aligned_cols=79 Identities=19% Similarity=0.262 Sum_probs=59.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhccCC-CchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHH
Q 009914 99 ISRALNGIGLALVAPAIQSLVADSTDD-SNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVV 177 (522)
Q Consensus 99 ~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i 177 (522)
+.-+..|+.........-..+.+.+|+ +++...+|-.+...++-.++-.++++.+... .||+..-.+.-+..++
T Consensus 287 ~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~-----~GW~~~AlitPiv~li 361 (491)
T PF03219_consen 287 LLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRR-----FGWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHHhHHHHHH
Confidence 444566777777777777888888864 5678888888888888777777888888888 8999988886665555
Q ss_pred HHHhh
Q 009914 178 VGTLV 182 (522)
Q Consensus 178 ~~~~~ 182 (522)
..+..
T Consensus 362 t~~~F 366 (491)
T PF03219_consen 362 TGLLF 366 (491)
T ss_pred HHHHH
Confidence 54433
No 315
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=61.53 E-value=1.3e+02 Score=27.36 Aligned_cols=93 Identities=16% Similarity=0.079 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHH-hchhHHHH----HHHHHHHHHHHHHHh-hh----hHHHHHHHHHHHHHHhhhhHHH
Q 009914 45 SLTLFRSIVQASCYPIAAYLAIR-HNRAHVIA----LGAFLWAAATFLVAF-SS----TFAQVAISRALNGIGLALVAPA 114 (522)
Q Consensus 45 ~~~s~~~~~~~i~~~~~G~l~Dr-~grr~~l~----~~~~~~~~~~~~~~~-~~----~~~~l~~~r~l~G~~~~~~~~~ 114 (522)
...-++..+..++.+..|.+... +.||+.+. .+.+++.++.++... .+ ++..+++.-++.|++.=+..+.
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 34445555555666666776653 45666544 234444444444212 11 3566777778888764333322
Q ss_pred HHHHHhhccC---CCchhHHHHHHHHH
Q 009914 115 IQSLVADSTD---DSNRGVAFGWLQLT 138 (522)
Q Consensus 115 ~~~~i~~~~~---~~~r~~~~~~~~~~ 138 (522)
.-.+...++ |++-|...|+....
T Consensus 225 -iL~lPhEyK~~~pk~ig~~Fg~iWGf 250 (267)
T PF07672_consen 225 -ILNLPHEYKGYNPKKIGIQFGLIWGF 250 (267)
T ss_pred -HhcChhhhcCCCcceehhHHHHHHHH
Confidence 233343343 34444444444333
No 316
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=58.76 E-value=28 Score=26.22 Aligned_cols=53 Identities=13% Similarity=0.102 Sum_probs=43.0
Q ss_pred ChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh
Q 009914 39 DPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS 91 (522)
Q Consensus 39 s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~ 91 (522)
.++..|-+.+++.-.+++.++++++..|+..+.+.=.+|..+..++..+..+.
T Consensus 52 ~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 52 QPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred CcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 34678889999999999999999999999988888777777777766655443
No 317
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=58.67 E-value=2.6e+02 Score=30.10 Aligned_cols=36 Identities=25% Similarity=0.258 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHH
Q 009914 135 LQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLIS 175 (522)
Q Consensus 135 ~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~ 175 (522)
...+..++.++..+++.++... .+|...+++.++++
T Consensus 106 l~~~M~lT~livAL~a~~Li~G-----L~~~~ALLLGAILA 141 (810)
T TIGR00844 106 LVPVMTSGWLVIALFVWILVPG-----LNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-----CCHHHHHHHHhhhc
Confidence 3344455555555555555333 57777777666554
No 318
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=57.87 E-value=2.2e+02 Score=28.84 Aligned_cols=58 Identities=22% Similarity=0.230 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 96 QVAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 96 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
.+++..++..+.....+++..+.-++..+|.-=|.+|.+.+...++|+---..+.-++
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~l 464 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWL 464 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHH
Confidence 3445567777777888889999999999999999999999999998854333333333
No 319
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=55.58 E-value=37 Score=30.64 Aligned_cols=12 Identities=17% Similarity=0.465 Sum_probs=7.0
Q ss_pred HHHHHHHHHhhCc
Q 009914 379 PVVGILAQHVYGF 391 (522)
Q Consensus 379 ~~~g~l~~~~~g~ 391 (522)
.+.||.... +|+
T Consensus 93 ~l~Gw~~gr-fGl 104 (254)
T PF07857_consen 93 CLTGWASGR-FGL 104 (254)
T ss_pred HHHHHHHhh-cee
Confidence 366677666 443
No 320
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=53.89 E-value=1.9e+02 Score=26.88 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009914 97 VAISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP 155 (522)
Q Consensus 97 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~ 155 (522)
.-..|.+.|+-.-.+ .+.++++.-.+|++++--..--.....+++.++-+++|-.+..
T Consensus 22 ~~~lr~~~g~~~vlf-~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~~ 79 (287)
T PF07760_consen 22 IPPLRVILGFPFVLF-LPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLNY 79 (287)
T ss_pred hhHHHHHHHHHHHHH-hccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566788888765444 4667889999986554333333444455555566666555543
No 321
>PRK10263 DNA translocase FtsK; Provisional
Probab=53.59 E-value=43 Score=37.64 Aligned_cols=16 Identities=6% Similarity=-0.130 Sum_probs=10.6
Q ss_pred HHhchhhHHHHHHHHH
Q 009914 372 ILSSFAPPVVGILAQH 387 (522)
Q Consensus 372 ~~~~i~~~~~g~l~~~ 387 (522)
.|+.+|..+...+...
T Consensus 142 gGGIIG~lLs~lL~~L 157 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPL 157 (1355)
T ss_pred ccchHHHHHHHHHHHH
Confidence 4667777776666665
No 322
>PRK02237 hypothetical protein; Provisional
Probab=53.26 E-value=52 Score=24.93 Aligned_cols=51 Identities=8% Similarity=0.014 Sum_probs=41.4
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh
Q 009914 41 TGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFS 91 (522)
Q Consensus 41 ~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~ 91 (522)
+..|-+.++|.-.+++.++++++..|+..+-+.=.+|..+..++..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 558899999999999999999999999988777777777776666555443
No 323
>PHA03239 envelope glycoprotein M; Provisional
Probab=52.15 E-value=2.4e+02 Score=27.68 Aligned_cols=16 Identities=25% Similarity=0.106 Sum_probs=9.3
Q ss_pred hhhHHHHHHHHhhccC
Q 009914 109 ALVAPAIQSLVADSTD 124 (522)
Q Consensus 109 ~~~~~~~~~~i~~~~~ 124 (522)
+..+|..+.-+.|+-.
T Consensus 58 ~~GFPCfy~~vVDY~~ 73 (429)
T PHA03239 58 FTGFPCFVAAVGDSEL 73 (429)
T ss_pred CCCCCccchhhcchhh
Confidence 4446666666666543
No 324
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=52.03 E-value=1.6e+02 Score=25.48 Aligned_cols=36 Identities=28% Similarity=0.212 Sum_probs=27.4
Q ss_pred hCCChhHHHHHHHHHHHHHhccchhhhhhhhHhhhc
Q 009914 254 TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSAR 289 (522)
Q Consensus 254 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~ 289 (522)
..-|+......+..++++.+...+..+.+..+.+++
T Consensus 145 ~s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 145 ASGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred HcCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 345777778888888998888888888777776655
No 325
>PRK10263 DNA translocase FtsK; Provisional
Probab=51.69 E-value=1.5e+02 Score=33.65 Aligned_cols=20 Identities=10% Similarity=-0.139 Sum_probs=9.0
Q ss_pred HHHHHhhhhhHHHHHHHhch
Q 009914 51 SIVQASCYPIAAYLAIRHNR 70 (522)
Q Consensus 51 ~~~~~i~~~~~G~l~Dr~gr 70 (522)
+++..+|..+...+..-||.
T Consensus 62 Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccchHHHHHHHHHHHHHhH
Confidence 34444444444444444553
No 326
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=51.31 E-value=69 Score=21.15 Aligned_cols=45 Identities=13% Similarity=0.262 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhhhhccCCC
Q 009914 140 NIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDP 189 (522)
Q Consensus 140 ~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 189 (522)
-+|.++|.+.+...... +++....++..+.+++..++....++++
T Consensus 12 il~~vvgyI~ssL~~~~-----~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVT-----YNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHHHhCCC-----CChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34555555544444333 7788887777777777777666665543
No 327
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=50.68 E-value=23 Score=35.27 Aligned_cols=41 Identities=22% Similarity=0.375 Sum_probs=19.5
Q ss_pred HHHHHHHHhCC-ChhHHHHHHHHHHHHHhccchhhhhhhhHh
Q 009914 246 FAAMWLELTGF-SHEKTAFLMALFVIASSLGGLFGGRMGDFL 286 (522)
Q Consensus 246 ~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 286 (522)
....++.-+|+ ++..-|.+++...+..++..+++|+.+.|+
T Consensus 345 ~vti~fA~lGflSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 345 LVTIFFACLGFLSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred HHHHHHHHhccCCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 33444444443 555545555444444444455555555443
No 328
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=49.67 E-value=27 Score=30.63 Aligned_cols=55 Identities=13% Similarity=0.160 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 009914 98 AISRALNGIGLALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVM 153 (522)
Q Consensus 98 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l 153 (522)
...-.-.|+|.+..+.++..-+.+.+| +......++..+.+-+..+.|-.+.-++
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566788999999888888888886 4556677777776666666665554443
No 329
>PHA03242 envelope glycoprotein M; Provisional
Probab=48.48 E-value=78 Score=30.89 Aligned_cols=18 Identities=17% Similarity=-0.001 Sum_probs=11.3
Q ss_pred hhhHHHHHHHHhhccCCC
Q 009914 109 ALVAPAIQSLVADSTDDS 126 (522)
Q Consensus 109 ~~~~~~~~~~i~~~~~~~ 126 (522)
+..+|..+.-+.|+-.-+
T Consensus 51 ~~GFPCfy~~vVdY~~~N 68 (428)
T PHA03242 51 RAGFPCFYAAVASYGLAN 68 (428)
T ss_pred CCCCCccchhhccccccc
Confidence 445667777777765444
No 330
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=48.15 E-value=69 Score=30.79 Aligned_cols=17 Identities=24% Similarity=0.192 Sum_probs=9.6
Q ss_pred hhhHHHHHHHHhhccCC
Q 009914 109 ALVAPAIQSLVADSTDD 125 (522)
Q Consensus 109 ~~~~~~~~~~i~~~~~~ 125 (522)
+..+|..+.-+.|+-.-
T Consensus 39 ~~GfPC~y~~vVDY~~~ 55 (374)
T PF01528_consen 39 GLGFPCFYAAVVDYSAL 55 (374)
T ss_pred CCCCCeeccccccchhc
Confidence 34466666666665433
No 331
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=47.92 E-value=2e+02 Score=25.40 Aligned_cols=34 Identities=24% Similarity=0.070 Sum_probs=26.4
Q ss_pred CCChhHHHHHHHHHHHHHhccchhhhhhhhHhhh
Q 009914 255 GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSA 288 (522)
Q Consensus 255 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 288 (522)
.-|+.+-+..+..++++.....+..|..++++..
T Consensus 160 tgS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~s~ 193 (232)
T COG2836 160 TGSAFEGALVMLAFGLGTLPNLLAMGIFSSKLSK 193 (232)
T ss_pred cCCHHHHHHHHHHHhhcccHHHHHHHHHHHHHHH
Confidence 3477778888888898888888888888777643
No 332
>COG4769 Predicted membrane protein [Function unknown]
Probab=46.04 E-value=60 Score=26.70 Aligned_cols=51 Identities=18% Similarity=0.152 Sum_probs=31.3
Q ss_pred HHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 009914 51 SIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIG 107 (522)
Q Consensus 51 ~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 107 (522)
.....+.+...-++..++|+|.+-.++...+ -++.+|..++.+.+++.+-.
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHhHHHHHHHHHHHhcc
Confidence 3344445555566777888777644444332 24567888888887776643
No 333
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=42.39 E-value=2.8e+02 Score=25.61 Aligned_cols=15 Identities=27% Similarity=0.337 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHh
Q 009914 325 VMHGLVLVVTGLFIS 339 (522)
Q Consensus 325 ~~~~~~~~~~g~~~~ 339 (522)
+.+.+.+++.+|+.+
T Consensus 24 ~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 24 WLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444455444
No 334
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=42.29 E-value=1.7e+02 Score=25.00 Aligned_cols=23 Identities=13% Similarity=-0.197 Sum_probs=18.9
Q ss_pred HHHHHHHHhhhhhHHHHHHHhch
Q 009914 48 LFRSIVQASCYPIAAYLAIRHNR 70 (522)
Q Consensus 48 s~~~~~~~i~~~~~G~l~Dr~gr 70 (522)
.-|.+++.+++.+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 44667788889999999999875
No 335
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=41.78 E-value=3.3e+02 Score=26.18 Aligned_cols=124 Identities=16% Similarity=0.151 Sum_probs=60.9
Q ss_pred CCChhHHHHHHHHHHHHHhccchhhhhhhhHh-hhcCCCchhHHHHHHHHHHHHHHHHHH-HHhCCCCCchhHHHHHHHH
Q 009914 255 GFSHEKTAFLMALFVIASSLGGLFGGRMGDFL-SARFPNSGRIILAQISSLSAIPLAALL-LLVLPDDPSTPVMHGLVLV 332 (522)
Q Consensus 255 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 332 (522)
|-..-+.+.+.+.+-..+-+|+.+.-++.|.- -.|.. ..-...+++..+....+. .+.... ....+++....+
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv----~vElllgligg~Sa~~ly~~FA~~~-~~~~~Vly~lt~ 113 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFV----DVELLLGLIGGVSAAALYLLFALES-APSRLVLYALTA 113 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHH----HHHHHHHHhccchHHHHHHHHHhcc-chHHHHHHHHHH
Confidence 44445556666666556666666655554432 11110 000111112222222222 122222 234555777888
Q ss_pred HHHHHHhccCCCcchhhhhhhcCcchhHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 009914 333 VTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 386 (522)
Q Consensus 333 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~ 386 (522)
.+|.-.|.-.| ..+.+..... .......+.....-++|...+..+..++.-
T Consensus 114 vIG~LVG~EiP-L~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lll 164 (508)
T COG4262 114 VIGVLVGAEIP-LLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLL 164 (508)
T ss_pred HHHHHHhcchH-HHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHh
Confidence 88988888888 7777776622 112222333333466777766666665543
No 336
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=41.31 E-value=1.7e+02 Score=23.90 Aligned_cols=25 Identities=20% Similarity=-0.064 Sum_probs=19.8
Q ss_pred HHHHHHHHhhhhhHHHHHHHhchhH
Q 009914 48 LFRSIVQASCYPIAAYLAIRHNRAH 72 (522)
Q Consensus 48 s~~~~~~~i~~~~~G~l~Dr~grr~ 72 (522)
.-|.+++.+.+.+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4466778888889999999987763
No 337
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=40.72 E-value=2.9e+02 Score=27.77 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHhhhhcc
Q 009914 168 FHIVGLISVVVGTLVRLFA 186 (522)
Q Consensus 168 f~~~~~~~~i~~~~~~~~~ 186 (522)
|.+..++.++..++.+..|
T Consensus 5 ~~il~iiiv~~~ilt~~iP 23 (465)
T PF03606_consen 5 FVILFIIIVFAAILTWIIP 23 (465)
T ss_pred HHHHHHHHHHHHHHHhcCc
Confidence 4444444455555555554
No 338
>PHA03237 envelope glycoprotein M; Provisional
Probab=40.39 E-value=3.2e+02 Score=26.91 Aligned_cols=18 Identities=22% Similarity=0.130 Sum_probs=11.0
Q ss_pred hhhHHHHHHHHhhccCCC
Q 009914 109 ALVAPAIQSLVADSTDDS 126 (522)
Q Consensus 109 ~~~~~~~~~~i~~~~~~~ 126 (522)
+..+|..+.-+.|+-.-+
T Consensus 50 ~~GFPCfy~~vVDY~~~N 67 (424)
T PHA03237 50 LTGFPCFYAAVVDYTQVN 67 (424)
T ss_pred CCCCCccchhhccccccC
Confidence 445667777777765433
No 339
>COG3619 Predicted membrane protein [Function unknown]
Probab=40.33 E-value=2.7e+02 Score=24.75 Aligned_cols=118 Identities=14% Similarity=0.118 Sum_probs=53.7
Q ss_pred ChhhhHHHHHHHHHHHHhhhhhHHHHHHHhch-hHH--HHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHhhh-
Q 009914 39 DPTGLGSLTLFRSIVQASCYPIAAYLAIRHNR-AHV--IALGAFLWAAATFLVAFS----STFAQVAISRALNGIGLAL- 110 (522)
Q Consensus 39 s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~gr-r~~--l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~- 110 (522)
.+...........+...++......+..|..| ..+ .....++.+...+..++. ++....+..-+.+|+-...
T Consensus 53 ~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf 132 (226)
T COG3619 53 GDAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASF 132 (226)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 35555666677777777775555555555543 121 223333333333333432 3444444444444421111
Q ss_pred ----------hHH-----HHHHHHhhccCC-CchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009914 111 ----------VAP-----AIQSLVADSTDD-SNRGVAFGWLQLTSNIGSLVGGLFSVVMAPM 156 (522)
Q Consensus 111 ----------~~~-----~~~~~i~~~~~~-~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~ 156 (522)
.+. ....-+.++... ++.-..-...+...-++.++|...++.+...
T Consensus 133 ~k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~ 194 (226)
T COG3619 133 RKVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLF 194 (226)
T ss_pred HHhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 111223344433 2223334445555556666666666666543
No 340
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=39.98 E-value=3.4e+02 Score=25.88 Aligned_cols=107 Identities=15% Similarity=0.142 Sum_probs=56.5
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHH---HHHHHHHHhhhhHHHHHHHHHHHHHHhh----hhHHH
Q 009914 42 GLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLW---AAATFLVAFSSTFAQVAISRALNGIGLA----LVAPA 114 (522)
Q Consensus 42 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~r~l~G~~~~----~~~~~ 114 (522)
..|.+..+..+... ..++.+++.+++|.-+.+..+.++. +--.+...++.|......+-.+.|.-.| +..|.
T Consensus 48 m~GI~~laP~la~~-l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPV 126 (354)
T PF04346_consen 48 MAGIMALAPVLAAF-LSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPV 126 (354)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhh
Confidence 34555555545444 4677789999999999888877653 2234445556666555555445444333 33444
Q ss_pred HHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009914 115 IQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMA 154 (522)
Q Consensus 115 ~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~ 154 (522)
...++.+ ++++-.+.|+... -+..-+|.++++.+.
T Consensus 127 aLgii~k---~D~~y~a~Gil~G--iitIPiG~~vggl~~ 161 (354)
T PF04346_consen 127 ALGIIEK---EDHKYLAKGILAG--IITIPIGCFVGGLIA 161 (354)
T ss_pred hhhhcCh---hhhHHHHHHHHHH--HhhhCHHHHHHHHHH
Confidence 4443332 3333344444432 222234444445443
No 341
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=39.51 E-value=5 Score=35.76 Aligned_cols=30 Identities=10% Similarity=0.142 Sum_probs=0.0
Q ss_pred chhHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 009914 357 KSRTSVYAMDRSFESILSSFAPPVVGILAQ 386 (522)
Q Consensus 357 ~~~~~~~g~~~~~~~~~~~i~~~~~g~l~~ 386 (522)
+.-++..-+..++-.+.-++.-.+...+..
T Consensus 131 ~~GAs~WtiLaFcLAF~LaivlLIIAv~L~ 160 (381)
T PF05297_consen 131 ELGASFWTILAFCLAFLLAIVLLIIAVLLH 160 (381)
T ss_dssp ------------------------------
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444433333333333444433
No 342
>PRK15086 ethanolamine utilization protein EutH; Provisional
Probab=36.99 E-value=3.8e+02 Score=25.63 Aligned_cols=108 Identities=13% Similarity=0.134 Sum_probs=57.1
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHH---HHHHHHHhhhhHHHHHHHHHHHHHH----hhhhHHH
Q 009914 42 GLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWA---AATFLVAFSSTFAQVAISRALNGIG----LALVAPA 114 (522)
Q Consensus 42 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~----~~~~~~~ 114 (522)
.+|.+..+..+... -.++.+++.+.+|.-+.+..+.++.. --.+...++.|......+-++.|.- ..+..|.
T Consensus 49 m~GI~~laP~ls~~-l~~ii~Pi~~~lgaDpsmfa~siLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPV 127 (372)
T PRK15086 49 MVGIMALAPVLAHV-LGPVIIPIYEALGADPSMFATTLLAVDMGGYQLAKELAGDPEAWLFSGLILGSMMGATIVFTIPV 127 (372)
T ss_pred HHHHHHHHHHHHHH-HhhhHHHHHHHhCCCHHHHHHHHHHhcCcCHHHHHHHhcChhhHHHHHHHHHHhccceEEeeHHh
Confidence 45555555555544 46677889999999998887766532 2234445555655555444444433 3344555
Q ss_pred HHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009914 115 IQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP 155 (522)
Q Consensus 115 ~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~ 155 (522)
...++.+ ++++-.+.|+.. .-+..-+|.++++.+..
T Consensus 128 aLgii~k---~D~~yla~Gil~--GiitIPiG~~vggl~~g 163 (372)
T PRK15086 128 ALGIIEK---EDRKYLALGVLA--GIITIPIGCLIGGLVAG 163 (372)
T ss_pred hHhhcch---hhHHHHHHHHHH--HhHhhcHHHHHHHHHHh
Confidence 5444433 333334444433 23333444555555543
No 343
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=36.32 E-value=4.5e+02 Score=26.20 Aligned_cols=59 Identities=7% Similarity=0.019 Sum_probs=30.5
Q ss_pred hhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhh
Q 009914 120 ADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLV 182 (522)
Q Consensus 120 ~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~ 182 (522)
.|..|+++|...........+.-..++....|.+.... .+++...+...+-.++..+..
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~----L~~~~si~aillG~llG~i~~ 69 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPG----LSFGQSLLAILLGNLLGGIFM 69 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhcccccc----ccHHHHHHHHHHHHHHHHHHH
Confidence 34567777754446655555555555555555544321 456655555444444444433
No 344
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=36.14 E-value=1.2e+02 Score=19.60 Aligned_cols=33 Identities=12% Similarity=0.036 Sum_probs=19.1
Q ss_pred HHHHHHHhhhhhHHHHHHH-hchhHHHHHHHHHH
Q 009914 49 FRSIVQASCYPIAAYLAIR-HNRAHVIALGAFLW 81 (522)
Q Consensus 49 ~~~~~~~i~~~~~G~l~Dr-~grr~~l~~~~~~~ 81 (522)
.......+.....|+..|+ ++.++...+..++.
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~ll 41 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLL 41 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 3444555566677888886 56656544443333
No 345
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=34.50 E-value=5.5e+02 Score=26.71 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=18.9
Q ss_pred CChhHHHHHHHHHHHHHhccchhhhhhhhHh
Q 009914 256 FSHEKTAFLMALFVIASSLGGLFGGRMGDFL 286 (522)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 286 (522)
-+....+..+..++++..+--++.+....|+
T Consensus 322 g~~~~g~~~l~~~gLG~~~Plll~~~~~~~~ 352 (571)
T PRK00293 322 GDLLLGGLTLYLLALGMGLPLILITTFGNKL 352 (571)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3555566667777777765555555555444
No 346
>PHA03242 envelope glycoprotein M; Provisional
Probab=33.85 E-value=4.7e+02 Score=25.76 Aligned_cols=15 Identities=0% Similarity=-0.383 Sum_probs=7.3
Q ss_pred chhHHHHHHHHHHHH
Q 009914 357 KSRTSVYAMDRSFES 371 (522)
Q Consensus 357 ~~~~~~~g~~~~~~~ 371 (522)
..-|-..|..-....
T Consensus 284 vl~G~~lG~lia~~~ 298 (428)
T PHA03242 284 VLPGPHLGALVAAGI 298 (428)
T ss_pred ccccchHHHHHHHHH
Confidence 344555555544433
No 347
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=32.00 E-value=24 Score=29.23 Aligned_cols=12 Identities=42% Similarity=0.894 Sum_probs=5.1
Q ss_pred HHHHHHHHHHHH
Q 009914 414 LAKALYTAIGIP 425 (522)
Q Consensus 414 ~~~~~~~~~~~~ 425 (522)
+..++++++++.
T Consensus 94 l~R~~~Vl~g~s 105 (163)
T PF06679_consen 94 LKRALYVLVGLS 105 (163)
T ss_pred hhhhHHHHHHHH
Confidence 344444444433
No 348
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=31.51 E-value=1.1e+02 Score=17.52 Aligned_cols=27 Identities=22% Similarity=0.121 Sum_probs=16.1
Q ss_pred hhhHHHH----HHHHHHHHhhhhhHHHHHHH
Q 009914 41 TGLGSLT----LFRSIVQASCYPIAAYLAIR 67 (522)
Q Consensus 41 ~~~g~~~----s~~~~~~~i~~~~~G~l~Dr 67 (522)
+|.|+.+ ++..+...+.+.+.+++-+|
T Consensus 4 aqlg~~~WhDLAAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 4 AQLGIAFWHDLAAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHHHHhc
Confidence 4455443 55566666677777776554
No 349
>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=30.02 E-value=1e+02 Score=22.10 Aligned_cols=18 Identities=11% Similarity=0.508 Sum_probs=4.3
Q ss_pred HHHHHHHHHHHhhCcccH
Q 009914 427 ALCCFIYSFLYSTYPRDR 444 (522)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~ 444 (522)
+++.+++.+.+..+++.+
T Consensus 17 iiaIvvW~iv~ieYrk~~ 34 (81)
T PF00558_consen 17 IIAIVVWTIVYIEYRKIK 34 (81)
T ss_dssp HHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444444444433
No 350
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=28.65 E-value=3.7e+02 Score=22.85 Aligned_cols=84 Identities=11% Similarity=0.016 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhccC-CCchhHHH-HHHHHHHHHHHHHHH-HHHHhhhcccccCCCCchHHHHHHHHH
Q 009914 98 AISRALNGIGLALVAPAIQSLVADSTD-DSNRGVAF-GWLQLTSNIGSLVGG-LFSVVMAPMTFMGIPGWRISFHIVGLI 174 (522)
Q Consensus 98 ~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~-~~~~~~~~lg~~~g~-~l~~~l~~~~~~~~~gw~~~f~~~~~~ 174 (522)
++..++.|+..|+.+-..+-++.+... ..+|+... ++.....++-.-+.- ...+++-.. .+-+.+-+...++
T Consensus 127 lItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPts-----lN~~L~pi~l~Ii 201 (226)
T COG4858 127 LITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTS-----LNPQLPPIALTII 201 (226)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCc-----CCcCCchHHHHHH
Confidence 445566777777777777777777654 23443222 111111111111111 222222222 5666666666666
Q ss_pred HHHHHHhhhhcc
Q 009914 175 SVVVGTLVRLFA 186 (522)
Q Consensus 175 ~~i~~~~~~~~~ 186 (522)
+.+...+.+.+.
T Consensus 202 Gav~lalRfylk 213 (226)
T COG4858 202 GAVILALRFYLK 213 (226)
T ss_pred HHHHHHHHHHHH
Confidence 666666655554
No 351
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=28.60 E-value=2.6e+02 Score=21.09 Aligned_cols=42 Identities=17% Similarity=0.264 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHH
Q 009914 135 LQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVV 177 (522)
Q Consensus 135 ~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i 177 (522)
......+..++|..+|-++-..... ...|-.+|++.|+..-+
T Consensus 48 IG~~~v~pil~G~~lG~WLD~~~~t-~~~~tl~~lllGv~~G~ 89 (100)
T TIGR02230 48 IGWSVAIPTLLGVAVGIWLDRHYPS-PFSWTLTMLIVGVVIGC 89 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC-CcHHHHHHHHHHHHHHH
Confidence 3333444555666666666554211 13456666666554333
No 352
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=28.19 E-value=4.5e+02 Score=23.77 Aligned_cols=31 Identities=10% Similarity=0.025 Sum_probs=14.9
Q ss_pred chhHHHHHHHHHHHHHHhccCCCcchhhhhhhcC
Q 009914 322 STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP 355 (522)
Q Consensus 322 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 355 (522)
.+...++.....+|+...... ..-...+..|
T Consensus 32 ~s~~FyY~sg~~lGv~~s~li---~~~~~~k~lP 62 (249)
T PF10225_consen 32 RSVLFYYSSGISLGVLASLLI---LLFQLSKLLP 62 (249)
T ss_pred cChhHHHhhhHHHHHHHHHHH---HHHHHHHHcc
Confidence 333334444445555433322 2455667777
No 353
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=27.70 E-value=5.7e+02 Score=24.73 Aligned_cols=21 Identities=19% Similarity=0.243 Sum_probs=11.4
Q ss_pred hhhhhcchhHHHHHHHhhhcc
Q 009914 218 AKSVIKIPSFQIIVAQGVTGS 238 (522)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~ 238 (522)
.++.+++|..+..++......
T Consensus 238 ~~~~~~nP~~~a~~lgli~~~ 258 (385)
T PF03547_consen 238 ILKLFKNPPLIAIILGLIIGL 258 (385)
T ss_pred HHHHHhCcHHHHHHHHHHHHH
Confidence 345566676665555444433
No 354
>COG1288 Predicted membrane protein [Function unknown]
Probab=27.38 E-value=5.7e+02 Score=25.34 Aligned_cols=23 Identities=17% Similarity=0.105 Sum_probs=16.6
Q ss_pred CCchHHHHHHHHHHHHHHHhhhh
Q 009914 162 PGWRISFHIVGLISVVVGTLVRL 184 (522)
Q Consensus 162 ~gw~~~f~~~~~~~~i~~~~~~~ 184 (522)
.+||...++...+..+..+..+.
T Consensus 216 ~~~Riv~~v~~~~~~i~y~~~Ya 238 (481)
T COG1288 216 MGLRIVVWVVFTLISIIYVYWYA 238 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999887766665555443
No 355
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=27.06 E-value=2.7e+02 Score=20.79 Aligned_cols=44 Identities=20% Similarity=0.407 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHHHHHHHHhh
Q 009914 128 RGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLISVVVGTLV 182 (522)
Q Consensus 128 r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~~~i~~~~~ 182 (522)
-|...++...+.++|....- .+. ..|-.+|.+.+++.+......
T Consensus 27 ~GfslS~L~~slgv~Q~~~k----via-------lQWIFAFvI~avlfv~sl~va 70 (97)
T PF08611_consen 27 MGFSLSYLTASLGVGQFFIK----VIA-------LQWIFAFVIAAVLFVLSLVVA 70 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555554433 222 468888888888766655444
No 356
>PLN03223 Polycystin cation channel protein; Provisional
Probab=26.99 E-value=1.1e+03 Score=27.62 Aligned_cols=12 Identities=17% Similarity=0.271 Sum_probs=4.7
Q ss_pred hHHHHHHHHHHH
Q 009914 359 RTSVYAMDRSFE 370 (522)
Q Consensus 359 ~~~~~g~~~~~~ 370 (522)
.....++...+.
T Consensus 1360 STf~sSL~TLFq 1371 (1634)
T PLN03223 1360 SDMTDSINSLFE 1371 (1634)
T ss_pred cCHHHHHHHHHH
Confidence 333344444333
No 357
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=26.51 E-value=4.1e+02 Score=22.68 Aligned_cols=59 Identities=10% Similarity=0.137 Sum_probs=35.0
Q ss_pred hhhHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHHHHHHH
Q 009914 109 ALVAPAIQSLVADSTDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFHIVGLI 174 (522)
Q Consensus 109 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~~~~~~ 174 (522)
+.-+....+++.+..|+++|.++.-+-..+.-+-.++.-.++.++.+. |++..++.|+.
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~-------~~~i~~igG~~ 69 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI-------FPWILLIGGLF 69 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHH
Confidence 444556667788888887776665544444444455555666677653 35555555543
No 358
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=26.42 E-value=8.3e+02 Score=26.23 Aligned_cols=17 Identities=12% Similarity=0.186 Sum_probs=8.4
Q ss_pred hhHHHHHHHHHHHHHHh
Q 009914 323 TPVMHGLVLVVTGLFIS 339 (522)
Q Consensus 323 ~~~~~~~~~~~~g~~~~ 339 (522)
.++++...+.+.+++.+
T Consensus 80 ~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 80 KPWLFPFLLTLLTFGFI 96 (701)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 33445555555555544
No 359
>PF07556 DUF1538: Protein of unknown function (DUF1538); InterPro: IPR011435 This family of protenis of unknown function contains several conserved glycines and phenylalanines.
Probab=26.40 E-value=4.5e+02 Score=23.10 Aligned_cols=87 Identities=10% Similarity=0.121 Sum_probs=49.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhcc--CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCchHHHH
Q 009914 92 STFAQVAISRALNGIGLALVAPAIQSLVADST--DDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMTFMGIPGWRISFH 169 (522)
Q Consensus 92 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~--~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~~~~~~gw~~~f~ 169 (522)
.+.+.++..-++.|+......|....+..+.- ++.+..+..=+...+.++|..++--+.-.+ ++|+.-++
T Consensus 60 ~~~~~l~~~gf~lGf~~t~AEPal~vL~~qve~vs~G~i~~~~l~~~vaiGVg~~i~lg~lRIi--------~g~~l~~~ 131 (212)
T PF07556_consen 60 GSLWLLLLFGFVLGFLVTIAEPALRVLADQVEEVSGGSIPKSVLILAVAIGVGIFIALGMLRII--------FGIPLWYF 131 (212)
T ss_pred CCcEEeHHHHHHHHHHHHhhCcHHHHHHHHHHHhCcCCcchhHHHHHHHHHHHHHHHHHHHHHH--------hCCcHHHH
Confidence 35677888889999999999998887765432 222233333333344444444443333334 46665555
Q ss_pred HHHHHHHHHHHhhhhccC
Q 009914 170 IVGLISVVVGTLVRLFAN 187 (522)
Q Consensus 170 ~~~~~~~i~~~~~~~~~~ 187 (522)
+... ..+..++.++.|+
T Consensus 132 l~~~-Y~l~~~l~~f~p~ 148 (212)
T PF07556_consen 132 LIPG-YILVLILTFFSPE 148 (212)
T ss_pred HHHH-HHHHHHHHHhcCH
Confidence 4433 3444455555553
No 360
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=26.34 E-value=5e+02 Score=23.61 Aligned_cols=9 Identities=11% Similarity=0.571 Sum_probs=4.3
Q ss_pred HHHH-HHHHH
Q 009914 245 SFAA-MWLEL 253 (522)
Q Consensus 245 ~~~~-~~~~~ 253 (522)
++.| .|.++
T Consensus 198 ~fvPv~Yi~~ 207 (254)
T PF07857_consen 198 NFVPVIYIQD 207 (254)
T ss_pred ccchHHHHHh
Confidence 3445 44554
No 361
>PRK03818 putative transporter; Validated
Probab=26.13 E-value=7.5e+02 Score=25.61 Aligned_cols=102 Identities=9% Similarity=0.096 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHhhhhHHHHHHHHh
Q 009914 42 GLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSS-TFAQVAISRALNGIGLALVAPAIQSLVA 120 (522)
Q Consensus 42 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 120 (522)
+.|+...++.++...+.-+...+.+..|.+.. +++.++..+..++..+.. ...-+=..+.+-.++.+...++..+.+.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~ 514 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWI-GYGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFAN 514 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHh
Confidence 45666666666666666555555444554443 344444443333332221 1111112233333444556677777777
Q ss_pred hc-cCCCchhHHHHHHHHHHHHHHH
Q 009914 121 DS-TDDSNRGVAFGWLQLTSNIGSL 144 (522)
Q Consensus 121 ~~-~~~~~r~~~~~~~~~~~~lg~~ 144 (522)
|. .+.+.-...++..+....++.+
T Consensus 515 ~~~~~~~~~~~gYa~~Yp~~~~~~i 539 (552)
T PRK03818 515 NLHPTSGAAALSYATVYPLVMFLRI 539 (552)
T ss_pred cccCCCCCcccchHHHHHHHHHHHH
Confidence 74 4443333334444333333333
No 362
>PHA03231 glycoprotein BALF4; Provisional
Probab=25.90 E-value=99 Score=33.12 Aligned_cols=18 Identities=11% Similarity=0.311 Sum_probs=8.4
Q ss_pred HHHHHHHhchhhHHHHHH
Q 009914 367 RSFESILSSFAPPVVGIL 384 (522)
Q Consensus 367 ~~~~~~~~~i~~~~~g~l 384 (522)
+.++.++++++..+.|++
T Consensus 680 ~vv~~v~ga~~SiVsG~~ 697 (829)
T PHA03231 680 NVVSGVAGAVGSIVSGVI 697 (829)
T ss_pred hhhhhHHHHHHHHHHHHH
Confidence 334444455555554443
No 363
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=25.05 E-value=5.5e+02 Score=23.68 Aligned_cols=36 Identities=17% Similarity=0.078 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhh
Q 009914 75 ALGAFLWAAATFLVAFS-STFAQVAISRALNGIGLAL 110 (522)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~ 110 (522)
+.+.++++++.++..+. ++.+.+.+.-++.+++.++
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 34444454444444443 4555555555555555443
No 364
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=24.83 E-value=8.9e+02 Score=26.02 Aligned_cols=16 Identities=19% Similarity=0.220 Sum_probs=7.5
Q ss_pred hHHHHHHHHHHHHHHh
Q 009914 324 PVMHGLVLVVTGLFIS 339 (522)
Q Consensus 324 ~~~~~~~~~~~g~~~~ 339 (522)
++++...+.+.+++.+
T Consensus 81 p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 81 PWLFAVGLTVSTFGFI 96 (704)
T ss_pred cHHHHHHHHHHHHHHH
Confidence 3334455555555443
No 365
>PHA03237 envelope glycoprotein M; Provisional
Probab=24.32 E-value=7e+02 Score=24.64 Aligned_cols=8 Identities=0% Similarity=-0.549 Sum_probs=4.4
Q ss_pred HHhchhHH
Q 009914 66 IRHNRAHV 73 (522)
Q Consensus 66 Dr~grr~~ 73 (522)
|++.-|.+
T Consensus 18 D~i~~r~W 25 (424)
T PHA03237 18 DYIHWRLW 25 (424)
T ss_pred chhhHHHH
Confidence 66655544
No 366
>PF10027 DUF2269: Predicted integral membrane protein (DUF2269); InterPro: IPR018729 Members of this family of bacterial hypothetical integral membrane proteins have no known function.
Probab=24.21 E-value=3.9e+02 Score=21.70 Aligned_cols=20 Identities=20% Similarity=0.416 Sum_probs=11.8
Q ss_pred HhchhhHHHHHHHHHhhCcc
Q 009914 373 LSSFAPPVVGILAQHVYGFK 392 (522)
Q Consensus 373 ~~~i~~~~~g~l~~~~~g~~ 392 (522)
.+.+.-++.|.......|+.
T Consensus 54 ~~~~~~~vtG~~l~~~~g~~ 73 (150)
T PF10027_consen 54 PGGILLPVTGLWLAWLLGWP 73 (150)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 34555566777666545664
No 367
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.09 E-value=3.2e+02 Score=20.61 Aligned_cols=32 Identities=6% Similarity=-0.109 Sum_probs=17.3
Q ss_pred HHHHHHhhhhhHHHHHHH-hchhHHHHHHHHHH
Q 009914 50 RSIVQASCYPIAAYLAIR-HNRAHVIALGAFLW 81 (522)
Q Consensus 50 ~~~~~~i~~~~~G~l~Dr-~grr~~l~~~~~~~ 81 (522)
..+...+...+.|.+.|+ ++-++.+.+.+++.
T Consensus 51 ~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lll 83 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIV 83 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 334444556667777775 66555444444333
No 368
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=23.96 E-value=4.7e+02 Score=22.57 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009914 125 DSNRGVAFGWLQLTSNIGSLVGGLFSVVMAP 155 (522)
Q Consensus 125 ~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~ 155 (522)
.++.+++..+...+..+|.++|.++..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4567888888888888888888888887754
No 369
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=23.41 E-value=2.7e+02 Score=19.58 Aligned_cols=59 Identities=14% Similarity=0.037 Sum_probs=33.3
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCC
Q 009914 64 LAIRHNRAHVIALGAFLWAAATFLVAFSSTFAQVAISRALNGIGLALVAPAIQSLVADSTDDS 126 (522)
Q Consensus 64 l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 126 (522)
--|+-.|++-..+.+.+-..+.++..+....+.+-+.- +..+...|-.-.++++--+++
T Consensus 10 ~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~~~la~~~----~~~av~LPwvAVviAN~~~~~ 68 (73)
T PF11298_consen 10 SQDQRRRRRRYLIMMGIRIPCFVLAAVVYRLGWLAWAI----IVGAVPLPWVAVVIANARPPR 68 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH----HHHhcccchhheeeccCCCCC
Confidence 34667788888888888887777777665542221111 122444554445555544433
No 370
>PTZ00370 STEVOR; Provisional
Probab=23.39 E-value=2.7e+02 Score=25.55 Aligned_cols=13 Identities=23% Similarity=0.618 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHhh
Q 009914 427 ALCCFIYSFLYST 439 (522)
Q Consensus 427 ~~~~~~~~~~~~~ 439 (522)
++.+++++++++|
T Consensus 269 vvliilYiwlyrr 281 (296)
T PTZ00370 269 VVLIILYIWLYRR 281 (296)
T ss_pred HHHHHHHHHHHHh
Confidence 3334444444444
No 371
>PF14851 FAM176: FAM176 family
Probab=23.30 E-value=59 Score=26.61 Aligned_cols=14 Identities=36% Similarity=0.422 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHH
Q 009914 417 ALYTAIGIPMALCC 430 (522)
Q Consensus 417 ~~~~~~~~~~~~~~ 430 (522)
++|.++.+.+.+.+
T Consensus 23 aLYFv~gVC~GLlL 36 (153)
T PF14851_consen 23 ALYFVSGVCAGLLL 36 (153)
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444443333
No 372
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=22.77 E-value=1.7e+02 Score=27.66 Aligned_cols=14 Identities=0% Similarity=-0.375 Sum_probs=7.9
Q ss_pred hhhhhhhHhhhcCC
Q 009914 278 FGGRMGDFLSARFP 291 (522)
Q Consensus 278 ~~g~l~~~~~~~~~ 291 (522)
+.-++..|+-.|+.
T Consensus 178 ~Viflv~rf~PKkt 191 (452)
T KOG3817|consen 178 VVIFLVARFFPKKT 191 (452)
T ss_pred HHHHHHHHhccccc
Confidence 44455666666654
No 373
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=22.70 E-value=2.6e+02 Score=19.15 Aligned_cols=49 Identities=14% Similarity=-0.073 Sum_probs=39.7
Q ss_pred hhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchh
Q 009914 23 SLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRA 71 (522)
Q Consensus 23 ~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr 71 (522)
..+....|.+.--+|.+..+.+.+.....+...+=..+..++-||+-+|
T Consensus 16 ~~l~~~~P~~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 16 GALLISVPLIAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4455666777777899999999888888888888888999999997554
No 374
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=22.55 E-value=2.1e+02 Score=18.02 Aligned_cols=22 Identities=18% Similarity=0.221 Sum_probs=11.3
Q ss_pred CCchHHHHHHHHHHHHHHHhhh
Q 009914 162 PGWRISFHIVGLISVVVGTLVR 183 (522)
Q Consensus 162 ~gw~~~f~~~~~~~~i~~~~~~ 183 (522)
.++.+.-++.+++..+..+..+
T Consensus 22 ~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 22 GGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred CCchHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555554444
No 375
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=22.49 E-value=3.8e+02 Score=22.46 Aligned_cols=64 Identities=13% Similarity=-0.109 Sum_probs=34.1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccc-ccCCCCchHHHHHHHHHHHHHHHhhhhcc
Q 009914 123 TDDSNRGVAFGWLQLTSNIGSLVGGLFSVVMAPMT-FMGIPGWRISFHIVGLISVVVGTLVRLFA 186 (522)
Q Consensus 123 ~~~~~r~~~~~~~~~~~~lg~~~g~~l~~~l~~~~-~~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 186 (522)
+|.+++.+..+...++.-.+...--++=+.+.... ......+...+++.++++.+..++.-.+.
T Consensus 15 ~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~ 79 (166)
T PF05255_consen 15 FDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVS 79 (166)
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhcccc
Confidence 44445555555555544444433334444443321 01112577888888888887776665544
No 376
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=22.12 E-value=3.2e+02 Score=19.90 Aligned_cols=40 Identities=18% Similarity=0.265 Sum_probs=27.7
Q ss_pred HHhhhhhHHHHHHHhch-------hHHHHHHHHHHHHHHHHHHhhhh
Q 009914 54 QASCYPIAAYLAIRHNR-------AHVIALGAFLWAAATFLVAFSST 93 (522)
Q Consensus 54 ~~i~~~~~G~l~Dr~gr-------r~~l~~~~~~~~~~~~~~~~~~~ 93 (522)
...+.+.++++..|..+ ++.+.++.++...+.++++...|
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 34456677777777654 67777777777777777776554
No 377
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=21.37 E-value=9.3e+02 Score=25.01 Aligned_cols=83 Identities=11% Similarity=0.040 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHhhhhHHHHHHHHh
Q 009914 42 GLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATFLVAFSST-FAQVAISRALNGIGLALVAPAIQSLVA 120 (522)
Q Consensus 42 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~ 120 (522)
+.|+..-++.++...+.-+...+.. .|-+.. +++.++..+..++..+... +.-+=....+-.++.+...++..+.+.
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~~-~G~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a~ 528 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIKE-MGLTLF-LLGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAVL 528 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHHH
Confidence 4677777777887777777766643 454443 3444444444333322221 111111222222344566677777777
Q ss_pred hccCCC
Q 009914 121 DSTDDS 126 (522)
Q Consensus 121 ~~~~~~ 126 (522)
|..+.+
T Consensus 529 ~~~~~~ 534 (562)
T TIGR03802 529 ERAGSS 534 (562)
T ss_pred HhcCCC
Confidence 766544
No 378
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=21.36 E-value=87 Score=29.56 Aligned_cols=71 Identities=18% Similarity=0.175 Sum_probs=49.5
Q ss_pred ChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH-HHHHhh---hhHHHHHHHHHHHHHHhh
Q 009914 39 DPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT-FLVAFS---STFAQVAISRALNGIGLA 109 (522)
Q Consensus 39 s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~-~~~~~~---~~~~~l~~~r~l~G~~~~ 109 (522)
.-.++|..+.++.++.++.+...|.+..++||-.....+.+.-..-. ..+... .+.+.+++.-.+.|.+.+
T Consensus 308 Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~li~~~~~w~~~~~~~~i~y~~aalwgv~d~ 382 (390)
T KOG3097|consen 308 GVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLLLITILFFWAPNPQDSWIFYVAAALWGVGDA 382 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHhcccCCCCceEEEeehhhcCccHH
Confidence 35678999999999999999999999999999998877765543322 222222 244555555566666544
No 379
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=21.31 E-value=8.3e+02 Score=24.42 Aligned_cols=122 Identities=15% Similarity=0.068 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHH
Q 009914 6 VTLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAAT 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~ 85 (522)
.....+.+-.++..+...+..|. .+..+++++.++...+.+...+...++.++--....+.|-|-....+.....++.
T Consensus 16 ~~~~~lglQH~lamfg~~V~VPl--ivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p 93 (451)
T COG2233 16 GKLLLLGLQHLLAMFGATVLVPL--LVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAP 93 (451)
T ss_pred HHHHHHHHHHHHHHHhcchHhhH--HhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHH
Confidence 34555566666666555444443 3456789999999999999999999888876653334555555555544444444
Q ss_pred HHHHhh---hhHHHHHHHHHHHHHHhhhhHHHHHHHHhhccCCCchh
Q 009914 86 FLVAFS---STFAQVAISRALNGIGLALVAPAIQSLVADSTDDSNRG 129 (522)
Q Consensus 86 ~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 129 (522)
...... +.....+.+-+..|+......+.....+.+.+||---|
T Consensus 94 ~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG 140 (451)
T COG2233 94 MIAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTG 140 (451)
T ss_pred HHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 443333 23566666666666665544444333788888876444
No 380
>PHA03239 envelope glycoprotein M; Provisional
Probab=21.09 E-value=7.2e+02 Score=24.56 Aligned_cols=8 Identities=13% Similarity=-0.259 Sum_probs=4.4
Q ss_pred HHhchhHH
Q 009914 66 IRHNRAHV 73 (522)
Q Consensus 66 Dr~grr~~ 73 (522)
|++.-|.+
T Consensus 26 D~i~~r~W 33 (429)
T PHA03239 26 ERISWRIW 33 (429)
T ss_pred hhhhHHHH
Confidence 66655544
No 381
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=20.68 E-value=8.2e+02 Score=24.13 Aligned_cols=120 Identities=9% Similarity=0.032 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCCChhhhHHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHHHHHHHHHH
Q 009914 7 TLVLVNLAGIMERADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQASCYPIAAYLAIRHNRAHVIALGAFLWAAATF 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~ 86 (522)
....+.+-..+..+...+..+++ +.... .++.+...+.+...+...++.++-+...++. -|-....+.....++..
T Consensus 6 ~~~~lglQh~l~~~~~~i~~p~i--v~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~ 81 (415)
T TIGR00801 6 QTLVLGLQHLLAMFGGTVLVPLL--VGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPM 81 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--Hhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHH
Confidence 33444444444444433333332 33445 8899999999999999999999988877653 11122222211111111
Q ss_pred H-HHhhhhHHHHHHHHHHHHHHhhhhHHH----HHHHHhhccCCCchhH
Q 009914 87 L-VAFSSTFAQVAISRALNGIGLALVAPA----IQSLVADSTDDSNRGV 130 (522)
Q Consensus 87 ~-~~~~~~~~~l~~~r~l~G~~~~~~~~~----~~~~i~~~~~~~~r~~ 130 (522)
. .....++.....+-++.|+........ ...++.+.+|+.-.+.
T Consensus 82 ~~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~ 130 (415)
T TIGR00801 82 IAIGSGLGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGP 130 (415)
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHH
Confidence 1 112224444444555555544433322 2345577788765544
No 382
>COG3619 Predicted membrane protein [Function unknown]
Probab=20.20 E-value=6.2e+02 Score=22.51 Aligned_cols=28 Identities=21% Similarity=0.144 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHhccchhhhhhhhHhhh
Q 009914 261 TAFLMALFVIASSLGGLFGGRMGDFLSA 288 (522)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 288 (522)
-........+.-++|......+.+|..+
T Consensus 57 ~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 57 LAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3344444445555554444444444443
No 383
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=20.00 E-value=35 Score=30.72 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhccchhhhhhhhHhhhcC
Q 009914 261 TAFLMALFVIASSLGGLFGGRMGDFLSARF 290 (522)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 290 (522)
.|++..+..+..+++..+.-++.+++|...
T Consensus 107 ~Gi~~l~l~~lLaL~vW~Ym~lLr~~GAs~ 136 (381)
T PF05297_consen 107 VGIVILFLCCLLALGVWFYMWLLRELGASF 136 (381)
T ss_dssp ------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 445555555544555555566777777653
Done!