Query 009917
Match_columns 522
No_of_seqs 392 out of 3506
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 15:51:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009917.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009917hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gwf_A Cyclohexanone monooxyge 100.0 6.5E-54 2.2E-58 450.5 24.2 460 3-520 8-532 (540)
2 3uox_A Otemo; baeyer-villiger 100.0 1.8E-53 6.2E-58 447.6 24.2 394 3-442 9-462 (545)
3 4ap3_A Steroid monooxygenase; 100.0 1.6E-53 5.5E-58 448.4 21.7 387 4-442 22-467 (549)
4 2xve_A Flavin-containing monoo 100.0 1.2E-51 4.1E-56 427.3 34.6 385 1-521 1-422 (464)
5 1w4x_A Phenylacetone monooxyge 100.0 7.1E-50 2.4E-54 422.3 28.7 432 3-486 16-504 (542)
6 2gv8_A Monooxygenase; FMO, FAD 100.0 6.1E-47 2.1E-51 391.4 31.4 356 3-496 6-410 (447)
7 4a9w_A Monooxygenase; baeyer-v 100.0 5.8E-39 2E-43 321.7 23.9 345 1-445 1-351 (357)
8 4b63_A L-ornithine N5 monooxyg 100.0 3E-35 1E-39 307.0 22.2 210 4-242 40-284 (501)
9 3d1c_A Flavin-containing putat 100.0 5.5E-34 1.9E-38 287.1 24.1 324 1-455 2-348 (369)
10 3lzw_A Ferredoxin--NADP reduct 100.0 3.7E-32 1.2E-36 269.5 18.9 289 4-441 8-310 (332)
11 2zbw_A Thioredoxin reductase; 100.0 5.8E-32 2E-36 268.7 18.5 295 3-442 5-313 (335)
12 3ab1_A Ferredoxin--NADP reduct 100.0 3.5E-31 1.2E-35 265.7 22.2 298 2-442 13-324 (360)
13 3fbs_A Oxidoreductase; structu 100.0 5.2E-31 1.8E-35 257.0 20.6 285 1-442 1-288 (297)
14 3f8d_A Thioredoxin reductase ( 100.0 1.7E-30 5.9E-35 256.3 21.1 283 4-442 16-313 (323)
15 2q7v_A Thioredoxin reductase; 100.0 4.5E-30 1.5E-34 254.0 22.5 288 3-443 8-309 (325)
16 3itj_A Thioredoxin reductase 1 100.0 2.1E-30 7E-35 257.6 17.7 292 3-442 22-331 (338)
17 2q0l_A TRXR, thioredoxin reduc 100.0 7.8E-30 2.7E-34 250.5 19.7 289 4-442 2-305 (311)
18 3r9u_A Thioredoxin reductase; 100.0 9.3E-30 3.2E-34 250.3 20.1 293 2-442 3-308 (315)
19 2a87_A TRXR, TR, thioredoxin r 100.0 1.2E-29 4.1E-34 252.0 18.8 286 3-442 14-312 (335)
20 1fl2_A Alkyl hydroperoxide red 100.0 3.8E-29 1.3E-33 245.5 19.8 287 4-442 2-301 (310)
21 1vdc_A NTR, NADPH dependent th 100.0 3.8E-29 1.3E-33 248.1 19.2 288 3-441 8-318 (333)
22 1trb_A Thioredoxin reductase; 100.0 1.7E-29 6E-34 249.1 16.4 289 2-441 4-309 (320)
23 3iwa_A FAD-dependent pyridine 100.0 3.2E-29 1.1E-33 260.5 16.6 309 1-445 1-330 (472)
24 3cty_A Thioredoxin reductase; 100.0 1.1E-28 3.7E-33 243.3 19.6 285 3-442 16-312 (319)
25 3ics_A Coenzyme A-disulfide re 100.0 4E-29 1.4E-33 266.8 14.6 302 1-443 34-352 (588)
26 3s5w_A L-ornithine 5-monooxyge 100.0 1.4E-27 4.6E-32 247.9 24.0 204 4-246 31-268 (463)
27 3klj_A NAD(FAD)-dependent dehy 100.0 1.2E-29 3.9E-34 255.9 6.4 281 3-445 9-295 (385)
28 4eqs_A Coenzyme A disulfide re 100.0 1.8E-28 6.2E-33 251.6 15.1 298 4-445 1-312 (437)
29 3urh_A Dihydrolipoyl dehydroge 100.0 2.1E-28 7.1E-33 255.6 14.6 311 1-445 23-364 (491)
30 3lxd_A FAD-dependent pyridine 100.0 3.8E-28 1.3E-32 248.2 15.4 293 3-445 9-322 (415)
31 1hyu_A AHPF, alkyl hydroperoxi 100.0 4.7E-27 1.6E-31 246.4 24.0 287 3-441 212-511 (521)
32 3ef6_A Toluene 1,2-dioxygenase 100.0 4.9E-29 1.7E-33 254.2 8.2 293 1-445 1-310 (410)
33 3l8k_A Dihydrolipoyl dehydroge 100.0 7E-29 2.4E-33 257.3 9.3 304 1-444 1-333 (466)
34 3oc4_A Oxidoreductase, pyridin 100.0 1.2E-27 4.2E-32 247.1 18.5 296 1-444 1-314 (452)
35 3fg2_P Putative rubredoxin red 100.0 1.6E-28 5.5E-33 250.0 11.5 292 3-445 1-311 (404)
36 3ntd_A FAD-dependent pyridine 100.0 2.5E-28 8.5E-33 259.8 13.1 300 4-445 2-339 (565)
37 3kd9_A Coenzyme A disulfide re 100.0 8.3E-28 2.9E-32 248.2 16.4 296 1-445 1-316 (449)
38 4fk1_A Putative thioredoxin re 99.9 2.2E-27 7.4E-32 232.3 18.0 177 1-240 4-181 (304)
39 2wpf_A Trypanothione reductase 99.9 4.1E-28 1.4E-32 253.0 13.4 308 1-444 4-355 (495)
40 2hqm_A GR, grase, glutathione 99.9 3.1E-28 1.1E-32 253.2 11.9 305 3-444 11-347 (479)
41 1mo9_A ORF3; nucleotide bindin 99.9 8.3E-28 2.9E-32 252.5 14.6 304 3-444 43-378 (523)
42 1zmd_A Dihydrolipoyl dehydroge 99.9 3.6E-28 1.2E-32 252.7 11.3 307 3-444 6-345 (474)
43 1ojt_A Surface protein; redox- 99.9 2E-27 7E-32 247.4 16.8 308 3-444 6-349 (482)
44 1xhc_A NADH oxidase /nitrite r 99.9 2E-28 6.7E-33 245.7 8.4 283 4-444 9-297 (367)
45 4gcm_A TRXR, thioredoxin reduc 99.9 4E-27 1.4E-31 231.3 17.1 171 4-240 7-179 (312)
46 1xdi_A RV3303C-LPDA; reductase 99.9 1.6E-27 5.5E-32 249.2 15.1 312 4-444 3-342 (499)
47 2bc0_A NADH oxidase; flavoprot 99.9 3E-27 1E-31 246.5 17.0 297 3-445 35-362 (490)
48 2qae_A Lipoamide, dihydrolipoy 99.9 6.4E-28 2.2E-32 250.4 11.3 308 3-444 2-340 (468)
49 2r9z_A Glutathione amide reduc 99.9 1.2E-27 4.3E-32 247.5 12.8 301 1-444 1-327 (463)
50 2a8x_A Dihydrolipoyl dehydroge 99.9 7.8E-28 2.7E-32 249.5 10.6 305 1-443 1-333 (464)
51 4a5l_A Thioredoxin reductase; 99.9 9.2E-27 3.2E-31 228.9 16.9 184 1-240 1-186 (314)
52 2gqw_A Ferredoxin reductase; f 99.9 5.4E-27 1.8E-31 238.8 15.6 288 3-445 7-309 (408)
53 2eq6_A Pyruvate dehydrogenase 99.9 2.2E-27 7.7E-32 245.8 12.2 302 1-445 4-335 (464)
54 3ic9_A Dihydrolipoamide dehydr 99.9 1.8E-28 6.2E-33 255.6 3.8 312 4-443 9-337 (492)
55 1lvl_A Dihydrolipoamide dehydr 99.9 3.2E-27 1.1E-31 244.2 13.0 298 3-444 5-330 (458)
56 1zk7_A HGII, reductase, mercur 99.9 1E-26 3.4E-31 241.3 16.0 307 2-444 3-334 (467)
57 3dk9_A Grase, GR, glutathione 99.9 4.8E-27 1.7E-31 244.5 13.3 301 3-444 20-356 (478)
58 3h8l_A NADH oxidase; membrane 99.9 9.5E-27 3.3E-31 237.5 15.2 296 4-445 2-335 (409)
59 1dxl_A Dihydrolipoamide dehydr 99.9 3.6E-27 1.2E-31 245.0 12.0 310 2-444 5-342 (470)
60 1q1r_A Putidaredoxin reductase 99.9 4.3E-27 1.5E-31 241.2 12.2 294 3-445 4-320 (431)
61 1ges_A Glutathione reductase; 99.9 1.1E-27 3.7E-32 247.2 7.7 299 3-444 4-328 (450)
62 1onf_A GR, grase, glutathione 99.9 4.3E-27 1.5E-31 245.8 12.2 303 1-444 1-371 (500)
63 2cdu_A NADPH oxidase; flavoenz 99.9 7.2E-27 2.5E-31 241.4 13.2 300 4-445 1-318 (452)
64 1ebd_A E3BD, dihydrolipoamide 99.9 1.3E-26 4.4E-31 239.8 14.9 304 3-444 3-333 (455)
65 2yqu_A 2-oxoglutarate dehydrog 99.9 2.7E-27 9.1E-32 244.9 9.6 303 4-444 2-327 (455)
66 1fec_A Trypanothione reductase 99.9 1.3E-26 4.6E-31 241.4 14.8 308 1-444 1-351 (490)
67 3lad_A Dihydrolipoamide dehydr 99.9 9.9E-27 3.4E-31 242.1 13.7 309 2-445 2-344 (476)
68 3o0h_A Glutathione reductase; 99.9 7.1E-27 2.4E-31 243.4 12.0 300 3-444 26-351 (484)
69 3dgh_A TRXR-1, thioredoxin red 99.9 1.4E-26 4.9E-31 241.1 13.9 308 3-444 9-352 (483)
70 1nhp_A NADH peroxidase; oxidor 99.9 2.2E-26 7.5E-31 237.4 14.9 296 4-444 1-316 (447)
71 3dgz_A Thioredoxin reductase 2 99.9 1.8E-26 6.1E-31 240.6 13.9 311 3-444 6-352 (488)
72 2v3a_A Rubredoxin reductase; a 99.9 2.7E-26 9.2E-31 232.1 14.7 289 3-444 4-306 (384)
73 1v59_A Dihydrolipoamide dehydr 99.9 4.7E-27 1.6E-31 244.7 9.2 306 3-444 5-350 (478)
74 3qfa_A Thioredoxin reductase 1 99.9 2.5E-26 8.6E-31 240.9 14.7 310 3-444 32-380 (519)
75 3cgb_A Pyridine nucleotide-dis 99.9 2.2E-26 7.6E-31 239.3 12.6 298 4-444 37-353 (480)
76 4dna_A Probable glutathione re 99.9 3.1E-26 1.1E-30 237.3 13.6 299 3-444 5-331 (463)
77 2x8g_A Thioredoxin glutathione 99.9 1.2E-25 4.2E-30 240.2 13.0 311 3-444 107-459 (598)
78 2vdc_G Glutamate synthase [NAD 99.9 1.1E-25 3.8E-30 231.2 9.9 171 3-244 122-303 (456)
79 4g6h_A Rotenone-insensitive NA 99.9 1.1E-25 3.9E-30 234.1 9.6 308 3-448 42-403 (502)
80 3k30_A Histamine dehydrogenase 99.9 2.1E-25 7.2E-30 241.7 8.9 268 3-446 391-675 (690)
81 4b1b_A TRXR, thioredoxin reduc 99.9 5.1E-25 1.8E-29 229.9 11.3 308 4-444 43-384 (542)
82 1lqt_A FPRA; NADP+ derivative, 99.9 1.1E-24 3.7E-29 224.2 13.0 172 1-240 1-202 (456)
83 3sx6_A Sulfide-quinone reducta 99.9 2.9E-25 9.8E-30 228.3 7.8 299 1-442 1-340 (437)
84 1m6i_A Programmed cell death p 99.9 9.9E-25 3.4E-29 227.3 7.4 314 2-445 10-353 (493)
85 1o94_A Tmadh, trimethylamine d 99.9 1.2E-24 4.1E-29 236.6 7.5 279 3-445 389-699 (729)
86 1ps9_A 2,4-dienoyl-COA reducta 99.9 1.6E-23 5.4E-28 226.4 12.3 273 3-441 373-671 (671)
87 2gag_A Heterotetrameric sarcos 99.9 1.2E-22 4.1E-27 226.9 16.5 293 4-442 129-440 (965)
88 1cjc_A Protein (adrenodoxin re 99.9 4E-23 1.4E-27 212.7 10.7 169 3-241 6-201 (460)
89 3h28_A Sulfide-quinone reducta 99.9 2.8E-23 9.5E-28 213.1 4.4 292 4-441 3-328 (430)
90 1gte_A Dihydropyrimidine dehyd 99.8 1.6E-21 5.3E-26 219.3 10.8 174 4-245 188-372 (1025)
91 3hyw_A Sulfide-quinone reducta 99.8 2.2E-22 7.6E-27 206.2 1.6 102 334-442 210-329 (430)
92 3vrd_B FCCB subunit, flavocyto 99.8 7.5E-21 2.6E-25 193.3 12.7 292 4-442 3-320 (401)
93 1y56_A Hypothetical protein PH 99.8 2.8E-20 9.4E-25 193.7 12.7 262 4-445 109-376 (493)
94 2gqf_A Hypothetical protein HI 99.4 1E-13 3.5E-18 140.0 5.7 136 1-162 2-168 (401)
95 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 1E-11 3.5E-16 122.9 10.3 129 4-161 2-164 (342)
96 3cgv_A Geranylgeranyl reductas 99.2 3E-11 1E-15 121.9 12.3 135 1-162 2-162 (397)
97 3oz2_A Digeranylgeranylglycero 99.2 2.9E-11 9.8E-16 121.8 11.9 136 1-162 2-162 (397)
98 3v76_A Flavoprotein; structura 99.2 2.4E-11 8.2E-16 123.1 11.1 133 3-166 27-190 (417)
99 1yvv_A Amine oxidase, flavin-c 99.2 5.1E-11 1.7E-15 117.4 12.5 129 4-162 3-162 (336)
100 2ywl_A Thioredoxin reductase r 99.2 9.2E-11 3.1E-15 104.6 12.7 108 4-161 2-109 (180)
101 2cul_A Glucose-inhibited divis 99.2 7.5E-11 2.6E-15 109.8 11.9 123 1-162 1-125 (232)
102 3nix_A Flavoprotein/dehydrogen 99.2 1.9E-10 6.5E-15 117.1 14.4 135 3-162 5-166 (421)
103 3fpz_A Thiazole biosynthetic e 99.1 2E-12 7E-17 127.1 -1.8 150 4-240 66-217 (326)
104 3rp8_A Flavoprotein monooxygen 99.1 1.2E-10 4E-15 118.2 10.0 129 3-162 23-181 (407)
105 2xdo_A TETX2 protein; tetracyc 99.1 3.9E-10 1.3E-14 113.9 13.0 130 2-162 25-182 (398)
106 3i3l_A Alkylhalidase CMLS; fla 99.1 6.6E-10 2.3E-14 117.4 14.9 137 1-162 21-188 (591)
107 3c96_A Flavin-containing monoo 99.1 2.9E-10 1E-14 115.4 11.7 137 1-162 2-169 (410)
108 3nlc_A Uncharacterized protein 99.1 2.5E-10 8.5E-15 118.9 10.9 131 4-162 108-277 (549)
109 2bry_A NEDD9 interacting prote 99.1 1.2E-10 4.2E-15 120.9 8.5 136 3-162 92-230 (497)
110 3alj_A 2-methyl-3-hydroxypyrid 99.1 2.1E-10 7.2E-15 115.1 9.8 129 1-162 9-160 (379)
111 2x3n_A Probable FAD-dependent 99.1 3.2E-10 1.1E-14 114.6 10.6 130 4-162 7-166 (399)
112 2vou_A 2,6-dihydroxypyridine h 99.1 6.1E-10 2.1E-14 112.4 12.5 130 2-162 4-153 (397)
113 2r0c_A REBC; flavin adenine di 99.1 9.9E-10 3.4E-14 115.6 14.5 132 4-162 27-196 (549)
114 1rp0_A ARA6, thiazole biosynth 99.1 1E-09 3.5E-14 105.4 13.4 136 3-162 39-191 (284)
115 3ihg_A RDME; flavoenzyme, anth 99.1 1.1E-09 3.9E-14 115.0 14.8 136 3-162 5-183 (535)
116 2qa2_A CABE, polyketide oxygen 99.1 9.8E-10 3.4E-14 114.1 13.7 134 3-162 12-166 (499)
117 3fmw_A Oxygenase; mithramycin, 99.1 9.2E-10 3.2E-14 116.0 13.4 132 4-162 50-207 (570)
118 3ces_A MNMG, tRNA uridine 5-ca 99.1 1.6E-10 5.5E-15 121.3 7.3 168 3-236 28-220 (651)
119 2qa1_A PGAE, polyketide oxygen 99.1 1.1E-09 3.8E-14 113.7 13.7 134 3-162 11-165 (500)
120 1k0i_A P-hydroxybenzoate hydro 99.0 3.2E-10 1.1E-14 114.4 9.1 133 4-162 3-163 (394)
121 3e1t_A Halogenase; flavoprotei 99.0 1.1E-09 3.9E-14 114.3 13.4 135 4-162 8-172 (512)
122 2ywl_A Thioredoxin reductase r 99.0 3.1E-10 1.1E-14 101.1 7.5 93 338-443 70-168 (180)
123 2i0z_A NAD(FAD)-utilizing dehy 99.0 4.5E-10 1.5E-14 115.2 8.1 131 4-162 27-191 (447)
124 2gmh_A Electron transfer flavo 99.0 3.9E-09 1.3E-13 111.7 15.0 136 4-162 36-217 (584)
125 1y0p_A Fumarate reductase flav 99.0 3.3E-09 1.1E-13 112.2 14.5 137 3-162 126-317 (571)
126 3atr_A Conserved archaeal prot 99.0 1.4E-09 4.9E-14 111.7 11.3 134 3-162 6-162 (453)
127 3ps9_A TRNA 5-methylaminomethy 99.0 5.8E-09 2E-13 112.7 15.7 130 4-162 273-473 (676)
128 3dme_A Conserved exported prot 99.0 2.2E-09 7.5E-14 106.9 11.6 61 76-162 149-209 (369)
129 2zxi_A TRNA uridine 5-carboxym 98.9 7.1E-10 2.4E-14 116.0 7.2 169 3-237 27-220 (637)
130 2uzz_A N-methyl-L-tryptophan o 98.9 3E-09 1E-13 106.3 11.3 35 4-38 3-37 (372)
131 1qo8_A Flavocytochrome C3 fuma 98.9 7.8E-09 2.7E-13 109.2 13.9 136 4-162 122-312 (566)
132 3dje_A Fructosyl amine: oxygen 98.9 1.1E-08 3.7E-13 104.6 14.6 38 3-40 6-44 (438)
133 3da1_A Glycerol-3-phosphate de 98.9 8E-09 2.7E-13 108.7 13.6 63 77-162 170-232 (561)
134 3pvc_A TRNA 5-methylaminomethy 98.9 1.4E-08 4.8E-13 109.8 15.5 36 4-39 265-300 (689)
135 2qcu_A Aerobic glycerol-3-phos 98.9 4.2E-09 1.4E-13 109.6 10.8 138 1-162 1-210 (501)
136 4hb9_A Similarities with proba 98.9 1E-08 3.5E-13 103.7 12.4 35 4-38 2-36 (412)
137 1y56_B Sarcosine oxidase; dehy 98.8 2.3E-08 7.9E-13 100.2 13.8 36 3-39 5-40 (382)
138 3k7m_X 6-hydroxy-L-nicotine ox 98.8 8.5E-09 2.9E-13 105.2 10.7 41 4-44 2-42 (431)
139 1ryi_A Glycine oxidase; flavop 98.8 1.2E-08 4.1E-13 102.2 11.1 36 4-39 18-53 (382)
140 3nyc_A D-arginine dehydrogenas 98.8 1.1E-08 3.9E-13 102.2 10.6 36 3-39 9-44 (381)
141 2gag_B Heterotetrameric sarcos 98.8 1.9E-08 6.6E-13 101.6 12.1 35 3-37 21-57 (405)
142 2dkh_A 3-hydroxybenzoate hydro 98.8 2.7E-08 9.2E-13 106.5 13.5 141 4-162 33-211 (639)
143 1d4d_A Flavocytochrome C fumar 98.8 4.6E-08 1.6E-12 103.3 14.8 136 4-162 127-317 (572)
144 4at0_A 3-ketosteroid-delta4-5a 98.8 6.6E-08 2.3E-12 100.8 15.4 38 4-41 42-79 (510)
145 2gf3_A MSOX, monomeric sarcosi 98.8 2.9E-08 9.8E-13 99.7 12.0 37 3-39 3-39 (389)
146 3kkj_A Amine oxidase, flavin-c 98.8 6.5E-09 2.2E-13 98.7 6.7 50 1-51 1-51 (336)
147 3jsk_A Cypbp37 protein; octame 98.8 8.2E-09 2.8E-13 100.3 7.1 103 3-109 79-191 (344)
148 2oln_A NIKD protein; flavoprot 98.8 2.6E-08 8.8E-13 100.4 10.9 38 1-38 1-39 (397)
149 3nrn_A Uncharacterized protein 98.8 1.8E-08 6.2E-13 102.4 9.7 41 4-44 1-41 (421)
150 3ka7_A Oxidoreductase; structu 98.7 4.6E-08 1.6E-12 99.5 11.1 40 4-43 1-40 (425)
151 3i6d_A Protoporphyrinogen oxid 98.7 6.6E-08 2.3E-12 99.6 11.8 40 3-42 5-50 (470)
152 1pn0_A Phenol 2-monooxygenase; 98.7 1.3E-07 4.5E-12 101.5 14.1 105 3-109 8-152 (665)
153 3cp8_A TRNA uridine 5-carboxym 98.7 4.4E-08 1.5E-12 102.9 9.2 169 3-237 21-215 (641)
154 1s3e_A Amine oxidase [flavin-c 98.6 1.1E-07 3.7E-12 99.5 11.9 41 3-43 4-44 (520)
155 2cul_A Glucose-inhibited divis 98.6 3.8E-08 1.3E-12 91.3 7.0 33 204-239 4-36 (232)
156 1kf6_A Fumarate reductase flav 98.6 2.5E-07 8.7E-12 98.0 14.1 37 3-39 5-43 (602)
157 2aqj_A Tryptophan halogenase, 98.6 6.4E-08 2.2E-12 101.6 9.4 34 3-36 5-41 (538)
158 2e1m_A L-glutamate oxidase; L- 98.6 5.9E-08 2E-12 96.1 8.3 91 3-101 44-136 (376)
159 2wdq_A Succinate dehydrogenase 98.6 4.2E-07 1.4E-11 96.1 15.4 137 4-162 8-206 (588)
160 2ivd_A PPO, PPOX, protoporphyr 98.6 1.2E-07 4.3E-12 97.9 10.9 41 3-43 16-56 (478)
161 2eq6_A Pyruvate dehydrogenase 98.6 2.8E-07 9.5E-12 94.8 13.3 101 4-161 170-270 (464)
162 3s5w_A L-ornithine 5-monooxyge 98.6 1.8E-07 6E-12 96.4 11.7 175 3-211 227-417 (463)
163 2gjc_A Thiazole biosynthetic e 98.6 1.3E-07 4.6E-12 91.2 10.0 103 4-109 66-177 (326)
164 2e5v_A L-aspartate oxidase; ar 98.6 2.4E-07 8.1E-12 95.5 12.5 36 5-41 1-36 (472)
165 1v59_A Dihydrolipoamide dehydr 98.6 3.2E-07 1.1E-11 94.8 13.5 103 4-161 184-286 (478)
166 2h88_A Succinate dehydrogenase 98.6 3.5E-07 1.2E-11 96.9 13.8 37 4-40 19-55 (621)
167 3c4a_A Probable tryptophan hyd 98.6 2E-08 7E-13 100.6 3.9 119 4-162 1-143 (381)
168 2rgh_A Alpha-glycerophosphate 98.6 3.6E-07 1.2E-11 96.4 13.3 38 3-40 32-69 (571)
169 2yqu_A 2-oxoglutarate dehydrog 98.6 2.6E-07 8.8E-12 94.9 12.0 96 4-161 168-263 (455)
170 1pj5_A N,N-dimethylglycine oxi 98.6 2.5E-07 8.4E-12 102.3 12.4 35 3-37 4-39 (830)
171 2v3a_A Rubredoxin reductase; a 98.6 4E-07 1.4E-11 91.3 12.7 98 3-161 145-242 (384)
172 2bs2_A Quinol-fumarate reducta 98.6 7.5E-07 2.6E-11 95.1 15.4 36 3-38 5-40 (660)
173 3c4n_A Uncharacterized protein 98.5 1.1E-07 3.6E-12 96.2 8.0 34 4-37 37-72 (405)
174 2e4g_A Tryptophan halogenase; 98.5 4.5E-07 1.6E-11 95.3 12.7 61 74-162 191-252 (550)
175 3axb_A Putative oxidoreductase 98.5 2.6E-07 9E-12 94.6 10.4 38 1-38 21-59 (448)
176 1ges_A Glutathione reductase; 98.5 4.3E-07 1.5E-11 93.0 11.9 98 3-161 167-264 (450)
177 1onf_A GR, grase, glutathione 98.5 1.8E-06 6.2E-11 89.6 16.7 102 4-168 177-278 (500)
178 1chu_A Protein (L-aspartate ox 98.5 2.5E-07 8.5E-12 96.8 10.1 36 4-40 9-44 (540)
179 1ebd_A E3BD, dihydrolipoamide 98.5 7.1E-07 2.4E-11 91.6 13.4 99 4-161 171-269 (455)
180 2pyx_A Tryptophan halogenase; 98.5 6.9E-07 2.4E-11 93.4 13.2 59 75-162 173-233 (526)
181 3urh_A Dihydrolipoyl dehydroge 98.5 7.6E-07 2.6E-11 92.3 13.4 105 4-168 199-303 (491)
182 2weu_A Tryptophan 5-halogenase 98.5 3.5E-07 1.2E-11 95.4 10.7 60 75-162 171-230 (511)
183 1zmd_A Dihydrolipoyl dehydroge 98.5 1E-06 3.5E-11 90.9 13.6 103 4-161 179-281 (474)
184 4gut_A Lysine-specific histone 98.5 6.2E-07 2.1E-11 97.3 12.3 38 3-40 336-373 (776)
185 2r9z_A Glutathione amide reduc 98.5 7.2E-07 2.5E-11 91.7 11.8 97 4-161 167-263 (463)
186 1dxl_A Dihydrolipoamide dehydr 98.5 6.7E-07 2.3E-11 92.2 11.6 101 4-161 178-278 (470)
187 1nhp_A NADH peroxidase; oxidor 98.5 6.3E-07 2.2E-11 91.7 11.3 101 3-168 149-249 (447)
188 2a8x_A Dihydrolipoyl dehydroge 98.4 1.6E-06 5.5E-11 89.2 13.7 99 4-161 172-270 (464)
189 3lxd_A FAD-dependent pyridine 98.4 1.2E-06 4.2E-11 88.6 12.5 99 3-161 152-250 (415)
190 3ef6_A Toluene 1,2-dioxygenase 98.4 9.4E-07 3.2E-11 89.3 10.9 98 3-161 143-240 (410)
191 3dgh_A TRXR-1, thioredoxin red 98.4 2.4E-06 8.1E-11 88.3 14.1 101 4-161 188-288 (483)
192 3ic9_A Dihydrolipoamide dehydr 98.4 2.2E-06 7.6E-11 88.7 13.8 103 4-168 175-277 (492)
193 1trb_A Thioredoxin reductase; 98.4 2.3E-06 7.9E-11 83.1 12.9 100 4-161 146-246 (320)
194 2wpf_A Trypanothione reductase 98.4 1.6E-06 5.6E-11 89.8 12.5 97 4-161 192-291 (495)
195 1fec_A Trypanothione reductase 98.4 1.4E-06 4.9E-11 90.1 12.0 97 4-161 188-287 (490)
196 2qae_A Lipoamide, dihydrolipoy 98.4 2.2E-06 7.5E-11 88.3 13.3 100 4-161 175-275 (468)
197 1lvl_A Dihydrolipoamide dehydr 98.4 7.3E-07 2.5E-11 91.6 9.7 100 4-168 172-271 (458)
198 3dgz_A Thioredoxin reductase 2 98.4 2.8E-06 9.5E-11 88.0 14.0 101 4-161 186-286 (488)
199 3fg2_P Putative rubredoxin red 98.4 1.7E-06 6E-11 87.2 12.2 98 4-161 143-240 (404)
200 3dk9_A Grase, GR, glutathione 98.4 2.8E-06 9.7E-11 87.7 13.8 102 4-161 188-292 (478)
201 1ojt_A Surface protein; redox- 98.4 1.1E-06 3.6E-11 91.0 10.4 101 3-161 185-285 (482)
202 2gqw_A Ferredoxin reductase; f 98.4 2.1E-06 7.1E-11 86.7 12.2 94 3-161 145-238 (408)
203 1q1r_A Putidaredoxin reductase 98.4 2.3E-06 8E-11 87.0 12.5 99 3-161 149-249 (431)
204 3oc4_A Oxidoreductase, pyridin 98.4 3.2E-06 1.1E-10 86.6 13.4 100 4-168 148-247 (452)
205 1mo9_A ORF3; nucleotide bindin 98.3 2.3E-06 7.8E-11 89.3 12.2 98 4-161 215-315 (523)
206 3lad_A Dihydrolipoamide dehydr 98.3 4E-06 1.4E-10 86.5 13.6 99 4-161 181-279 (476)
207 4dgk_A Phytoene dehydrogenase; 98.3 3.2E-07 1.1E-11 95.4 5.3 49 4-52 2-51 (501)
208 1xdi_A RV3303C-LPDA; reductase 98.3 2.6E-06 8.8E-11 88.5 12.1 96 4-161 183-278 (499)
209 1xhc_A NADH oxidase /nitrite r 98.3 9.4E-07 3.2E-11 87.9 8.2 90 4-161 144-233 (367)
210 2hqm_A GR, grase, glutathione 98.3 3.5E-06 1.2E-10 86.9 12.5 98 4-161 186-284 (479)
211 4gde_A UDP-galactopyranose mut 98.3 1.1E-06 3.7E-11 91.6 8.5 41 4-44 11-52 (513)
212 3iwa_A FAD-dependent pyridine 98.3 4.2E-06 1.4E-10 86.2 12.9 97 4-161 160-257 (472)
213 2zbw_A Thioredoxin reductase; 98.3 4.7E-06 1.6E-10 81.5 12.6 99 4-161 153-251 (335)
214 3o0h_A Glutathione reductase; 98.3 3.7E-06 1.3E-10 86.9 12.3 96 4-161 192-287 (484)
215 1zk7_A HGII, reductase, mercur 98.3 3.7E-06 1.3E-10 86.5 12.2 94 4-161 177-270 (467)
216 2bc0_A NADH oxidase; flavoprot 98.3 2.9E-06 9.9E-11 87.9 11.3 97 3-161 194-290 (490)
217 2cdu_A NADPH oxidase; flavoenz 98.3 3.4E-06 1.2E-10 86.4 11.6 96 4-161 150-246 (452)
218 4b1b_A TRXR, thioredoxin reduc 98.3 3.6E-06 1.2E-10 87.7 11.6 101 3-169 223-323 (542)
219 3cgb_A Pyridine nucleotide-dis 98.3 2.2E-06 7.4E-11 88.6 9.7 96 3-161 186-281 (480)
220 4eqs_A Coenzyme A disulfide re 98.3 3E-06 1E-10 86.3 10.6 92 4-161 148-239 (437)
221 2b9w_A Putative aminooxidase; 98.3 9.4E-07 3.2E-11 89.7 6.7 42 3-44 6-48 (424)
222 3ntd_A FAD-dependent pyridine 98.3 5.6E-06 1.9E-10 87.3 12.8 114 4-161 152-266 (565)
223 1jnr_A Adenylylsulfate reducta 98.2 5.7E-06 1.9E-10 88.4 12.8 34 4-37 23-60 (643)
224 3hyw_A Sulfide-quinone reducta 98.2 2.1E-06 7.2E-11 87.3 9.1 106 204-377 3-110 (430)
225 3gyx_A Adenylylsulfate reducta 98.2 3.2E-06 1.1E-10 90.2 10.8 34 4-37 23-62 (662)
226 1rsg_A FMS1 protein; FAD bindi 98.2 6.6E-07 2.2E-11 93.4 5.3 51 3-53 8-61 (516)
227 1m6i_A Programmed cell death p 98.2 5.5E-06 1.9E-10 85.7 11.8 97 4-161 181-281 (493)
228 2bi7_A UDP-galactopyranose mut 98.2 9.7E-07 3.3E-11 88.3 5.6 44 1-44 1-44 (384)
229 4dna_A Probable glutathione re 98.2 6.4E-06 2.2E-10 84.6 11.9 97 3-161 170-267 (463)
230 3qfa_A Thioredoxin reductase 1 98.2 1.2E-05 4E-10 83.8 14.0 104 4-161 211-314 (519)
231 3vrd_B FCCB subunit, flavocyto 98.2 2E-06 6.7E-11 86.7 7.4 108 202-378 1-110 (401)
232 3itj_A Thioredoxin reductase 1 98.2 1E-05 3.4E-10 79.1 12.0 97 4-161 174-270 (338)
233 2bcg_G Secretory pathway GDP d 98.2 1.5E-06 5.2E-11 89.0 5.8 42 3-44 11-52 (453)
234 1v0j_A UDP-galactopyranose mut 98.2 1.5E-06 5E-11 87.5 5.6 42 3-44 7-49 (399)
235 3lov_A Protoporphyrinogen oxid 98.1 1.8E-06 6.3E-11 89.0 6.2 50 1-50 2-54 (475)
236 1fl2_A Alkyl hydroperoxide red 98.1 1.7E-05 6E-10 76.5 12.8 96 4-161 145-241 (310)
237 3hdq_A UDP-galactopyranose mut 98.1 2.6E-06 8.8E-11 85.1 6.8 42 3-44 29-70 (397)
238 2q7v_A Thioredoxin reductase; 98.1 7.3E-06 2.5E-10 79.9 10.0 96 4-161 153-248 (325)
239 3ab1_A Ferredoxin--NADP reduct 98.1 8.2E-06 2.8E-10 80.8 10.3 99 4-161 164-262 (360)
240 2yg5_A Putrescine oxidase; oxi 98.1 1.5E-06 5.1E-11 89.1 5.0 42 3-44 5-46 (453)
241 3pl8_A Pyranose 2-oxidase; sub 98.1 2.7E-05 9.2E-10 82.7 14.7 40 3-42 46-85 (623)
242 2q0l_A TRXR, thioredoxin reduc 98.1 7.9E-06 2.7E-10 79.0 9.6 97 4-161 144-240 (311)
243 4dsg_A UDP-galactopyranose mut 98.1 3.4E-06 1.2E-10 87.1 7.3 51 3-53 9-62 (484)
244 3ics_A Coenzyme A-disulfide re 98.1 1E-05 3.5E-10 85.8 10.9 95 3-161 187-281 (588)
245 1vdc_A NTR, NADPH dependent th 98.1 9.7E-06 3.3E-10 79.2 10.1 99 4-161 160-258 (333)
246 3f8d_A Thioredoxin reductase ( 98.1 1.4E-05 4.8E-10 77.4 10.6 97 3-161 154-250 (323)
247 1sez_A Protoporphyrinogen oxid 98.1 3.2E-06 1.1E-10 87.8 6.3 49 3-51 13-62 (504)
248 3cty_A Thioredoxin reductase; 98.1 1.9E-05 6.4E-10 76.7 11.2 96 4-161 156-251 (319)
249 3d1c_A Flavin-containing putat 98.1 1.4E-05 4.9E-10 79.1 10.4 104 4-161 167-271 (369)
250 3nks_A Protoporphyrinogen oxid 98.1 2.6E-06 8.8E-11 87.9 5.0 41 4-44 3-45 (477)
251 2jae_A L-amino acid oxidase; o 98.0 3.1E-06 1.1E-10 87.6 5.6 42 3-44 11-52 (489)
252 3kd9_A Coenzyme A disulfide re 98.0 2.2E-05 7.6E-10 80.2 11.7 95 4-161 149-243 (449)
253 3l8k_A Dihydrolipoyl dehydroge 98.0 2.2E-05 7.4E-10 80.7 11.0 99 4-161 173-271 (466)
254 2vvm_A Monoamine oxidase N; FA 98.0 4.9E-06 1.7E-10 86.2 5.9 41 4-44 40-80 (495)
255 2a87_A TRXR, TR, thioredoxin r 98.0 8.6E-06 2.9E-10 79.8 7.2 96 4-161 156-251 (335)
256 1i8t_A UDP-galactopyranose mut 98.0 6.7E-06 2.3E-10 81.7 6.3 41 4-44 2-42 (367)
257 3lzw_A Ferredoxin--NADP reduct 98.0 3.2E-05 1.1E-09 75.3 11.1 95 4-161 155-249 (332)
258 4g6h_A Rotenone-insensitive NA 98.0 2.8E-05 9.6E-10 80.5 11.1 98 4-161 218-331 (502)
259 2x8g_A Thioredoxin glutathione 98.0 6.3E-05 2.2E-09 79.8 13.8 103 4-161 287-394 (598)
260 3klj_A NAD(FAD)-dependent dehy 97.9 5.5E-06 1.9E-10 82.8 4.6 66 4-103 147-212 (385)
261 3r9u_A Thioredoxin reductase; 97.9 2.9E-05 1E-09 74.9 9.6 96 4-161 148-243 (315)
262 1hyu_A AHPF, alkyl hydroperoxi 97.9 7.1E-05 2.4E-09 77.9 12.5 96 4-161 356-452 (521)
263 3sx6_A Sulfide-quinone reducta 97.9 1.4E-05 4.8E-10 81.4 7.0 46 332-378 67-114 (437)
264 1b37_A Protein (polyamine oxid 97.9 1.2E-05 4.1E-10 82.8 6.4 55 3-57 4-60 (472)
265 4a5l_A Thioredoxin reductase; 97.9 5.6E-05 1.9E-09 73.0 10.3 101 4-168 153-253 (314)
266 3k30_A Histamine dehydrogenase 97.8 4.8E-05 1.6E-09 82.1 10.6 98 4-161 524-623 (690)
267 2iid_A L-amino-acid oxidase; f 97.8 1E-05 3.4E-10 84.0 4.9 42 3-44 33-74 (498)
268 1d5t_A Guanine nucleotide diss 97.8 1.5E-05 5.1E-10 81.1 5.6 42 3-44 6-47 (433)
269 3p1w_A Rabgdi protein; GDI RAB 97.8 1.4E-05 4.8E-10 81.4 5.1 42 3-44 20-61 (475)
270 3h8l_A NADH oxidase; membrane 97.7 4.8E-05 1.6E-09 76.7 7.9 35 204-241 2-39 (409)
271 3h28_A Sulfide-quinone reducta 97.7 2.7E-05 9.4E-10 79.0 6.1 107 204-378 3-111 (430)
272 2xve_A Flavin-containing monoo 97.7 0.00014 4.7E-09 74.6 10.7 35 3-37 197-231 (464)
273 3ihm_A Styrene monooxygenase A 97.7 2.2E-05 7.6E-10 79.7 4.3 33 4-36 23-55 (430)
274 2z3y_A Lysine-specific histone 97.7 2.9E-05 1E-09 83.3 5.2 42 3-44 107-148 (662)
275 3fbs_A Oxidoreductase; structu 97.6 8.1E-05 2.8E-09 71.1 7.5 85 3-161 141-225 (297)
276 2xag_A Lysine-specific histone 97.6 3.4E-05 1.2E-09 84.3 5.3 42 3-44 278-319 (852)
277 1c0p_A D-amino acid oxidase; a 97.6 6.2E-05 2.1E-09 74.5 5.7 34 3-36 6-39 (363)
278 2gv8_A Monooxygenase; FMO, FAD 97.5 0.0002 6.9E-09 73.0 8.8 34 4-37 213-247 (447)
279 3g3e_A D-amino-acid oxidase; F 97.5 4.9E-05 1.7E-09 74.8 3.9 34 4-37 1-40 (351)
280 1lqt_A FPRA; NADP+ derivative, 97.5 0.00034 1.2E-08 71.4 9.9 35 4-38 148-203 (456)
281 4gcm_A TRXR, thioredoxin reduc 97.4 0.0006 2.1E-08 65.7 10.9 34 4-37 146-179 (312)
282 2gag_A Heterotetrameric sarcos 97.4 0.00038 1.3E-08 77.8 10.6 93 4-161 285-382 (965)
283 4a9w_A Monooxygenase; baeyer-v 97.4 0.00015 5E-09 71.2 6.4 33 3-36 163-195 (357)
284 1cjc_A Protein (adrenodoxin re 97.4 0.0008 2.7E-08 68.7 11.7 34 4-37 146-200 (460)
285 3gwf_A Cyclohexanone monooxyge 97.3 0.00062 2.1E-08 71.0 10.1 35 3-37 178-212 (540)
286 1o94_A Tmadh, trimethylamine d 97.3 0.00041 1.4E-08 75.2 8.9 69 4-107 529-599 (729)
287 3g5s_A Methylenetetrahydrofola 97.3 0.00018 6.1E-09 70.5 5.3 36 4-39 2-37 (443)
288 1ps9_A 2,4-dienoyl-COA reducta 97.3 0.00049 1.7E-08 73.9 9.1 28 4-31 495-522 (671)
289 2vdc_G Glutamate synthase [NAD 97.3 0.00046 1.6E-08 70.3 8.0 34 4-37 265-299 (456)
290 3ayj_A Pro-enzyme of L-phenyla 97.2 0.00012 4.1E-09 78.0 2.8 35 4-38 57-100 (721)
291 2bry_A NEDD9 interacting prote 97.1 0.00027 9.2E-09 73.0 4.0 37 201-240 90-126 (497)
292 4fk1_A Putative thioredoxin re 97.1 0.0028 9.6E-08 60.7 11.0 32 205-239 8-39 (304)
293 3alj_A 2-methyl-3-hydroxypyrid 97.1 0.00033 1.1E-08 69.7 4.2 35 203-240 11-45 (379)
294 1gte_A Dihydropyrimidine dehyd 97.0 0.0028 9.5E-08 71.3 11.7 33 4-36 333-366 (1025)
295 3uox_A Otemo; baeyer-villiger 96.9 0.0015 5E-08 68.2 8.0 34 4-37 186-219 (545)
296 1rp0_A ARA6, thiazole biosynth 96.8 0.0012 4E-08 62.8 5.4 35 203-240 39-74 (284)
297 4ap3_A Steroid monooxygenase; 96.8 0.0055 1.9E-07 63.9 10.9 35 3-37 191-225 (549)
298 1kdg_A CDH, cellobiose dehydro 96.7 0.00096 3.3E-08 69.8 4.8 35 3-37 7-41 (546)
299 3ces_A MNMG, tRNA uridine 5-ca 96.7 0.0014 4.7E-08 69.0 5.7 33 204-239 29-61 (651)
300 2x3n_A Probable FAD-dependent 96.7 0.0013 4.5E-08 65.7 5.1 34 204-240 7-40 (399)
301 3nlc_A Uncharacterized protein 96.7 0.0013 4.5E-08 68.3 5.0 35 203-240 107-141 (549)
302 3t37_A Probable dehydrogenase; 96.6 0.0012 4.1E-08 68.7 4.5 36 3-38 17-53 (526)
303 3v76_A Flavoprotein; structura 96.6 0.00084 2.9E-08 67.5 3.0 35 203-240 27-61 (417)
304 1n4w_A CHOD, cholesterol oxida 96.6 0.0015 5.2E-08 67.5 4.9 38 2-39 4-41 (504)
305 1ju2_A HydroxynitrIle lyase; f 96.6 0.0011 3.9E-08 69.0 3.8 34 4-38 27-60 (536)
306 2vou_A 2,6-dihydroxypyridine h 96.5 0.002 6.9E-08 64.3 5.3 35 203-240 5-39 (397)
307 1vg0_A RAB proteins geranylger 96.5 0.0022 7.6E-08 67.4 5.6 42 3-44 8-49 (650)
308 2zxi_A TRNA uridine 5-carboxym 96.4 0.0021 7.1E-08 67.4 4.6 33 204-239 28-60 (637)
309 2xdo_A TETX2 protein; tetracyc 96.4 0.0028 9.7E-08 63.3 5.5 35 203-240 26-60 (398)
310 1yvv_A Amine oxidase, flavin-c 96.4 0.0049 1.7E-07 59.8 6.9 34 204-240 3-36 (336)
311 3q9t_A Choline dehydrogenase a 96.3 0.002 6.9E-08 67.4 4.1 35 3-37 6-41 (577)
312 3cp8_A TRNA uridine 5-carboxym 96.3 0.004 1.4E-07 65.4 6.0 34 203-239 21-54 (641)
313 1gpe_A Protein (glucose oxidas 96.3 0.0027 9.3E-08 66.8 4.7 37 2-38 23-60 (587)
314 1id1_A Putative potassium chan 96.3 0.005 1.7E-07 52.3 5.5 35 1-35 1-35 (153)
315 1coy_A Cholesterol oxidase; ox 96.2 0.003 1E-07 65.3 4.7 35 3-37 11-45 (507)
316 3rp8_A Flavoprotein monooxygen 96.2 0.0024 8.3E-08 64.0 3.4 37 201-240 21-57 (407)
317 3qj4_A Renalase; FAD/NAD(P)-bi 96.1 0.0088 3E-07 58.2 7.3 33 204-239 2-37 (342)
318 3dfz_A SIRC, precorrin-2 dehyd 96.1 0.0033 1.1E-07 56.9 3.8 36 200-238 28-63 (223)
319 3qvp_A Glucose oxidase; oxidor 96.1 0.0034 1.2E-07 65.7 4.0 34 3-36 19-53 (583)
320 1y0p_A Fumarate reductase flav 96.0 0.03 1E-06 58.7 11.2 34 204-240 127-160 (571)
321 4b63_A L-ornithine N5 monooxyg 96.0 0.019 6.5E-07 59.2 9.4 34 4-37 247-282 (501)
322 3nix_A Flavoprotein/dehydrogen 96.0 0.0057 2E-07 61.4 5.3 33 204-239 6-38 (421)
323 3fim_B ARYL-alcohol oxidase; A 96.0 0.0036 1.2E-07 65.4 3.9 36 3-38 2-38 (566)
324 2gqf_A Hypothetical protein HI 96.0 0.0038 1.3E-07 62.5 3.6 34 204-240 5-38 (401)
325 2i0z_A NAD(FAD)-utilizing dehy 95.9 0.0031 1.1E-07 64.1 2.6 47 329-376 139-191 (447)
326 1k0i_A P-hydroxybenzoate hydro 95.8 0.004 1.4E-07 62.0 3.3 33 205-240 4-36 (394)
327 2g1u_A Hypothetical protein TM 95.8 0.01 3.4E-07 50.6 5.1 35 3-37 19-53 (155)
328 2jbv_A Choline oxidase; alcoho 95.7 0.0058 2E-07 63.7 4.1 36 3-38 13-49 (546)
329 1lss_A TRK system potassium up 95.7 0.011 3.7E-07 49.0 4.8 34 3-36 4-37 (140)
330 3llv_A Exopolyphosphatase-rela 95.7 0.012 4E-07 49.1 5.1 33 4-36 7-39 (141)
331 4hb9_A Similarities with proba 95.6 0.018 6E-07 57.4 7.0 33 205-240 3-35 (412)
332 3fwz_A Inner membrane protein 95.6 0.014 4.7E-07 48.7 5.1 33 4-36 8-40 (140)
333 1qo8_A Flavocytochrome C3 fuma 95.5 0.065 2.2E-06 56.1 11.3 34 204-240 122-155 (566)
334 3pvc_A TRNA 5-methylaminomethy 95.5 0.033 1.1E-06 59.8 8.9 34 203-239 264-297 (689)
335 3atr_A Conserved archaeal prot 95.4 0.0042 1.4E-07 63.3 1.6 34 204-240 7-40 (453)
336 3i3l_A Alkylhalidase CMLS; fla 95.3 0.0069 2.4E-07 63.7 2.7 35 202-239 22-56 (591)
337 3e1t_A Halogenase; flavoprotei 95.2 0.01 3.5E-07 61.4 3.8 33 204-239 8-40 (512)
338 3cgv_A Geranylgeranyl reductas 95.2 0.04 1.4E-06 54.6 7.9 34 204-240 5-38 (397)
339 2hmt_A YUAA protein; RCK, KTN, 95.1 0.021 7.3E-07 47.4 4.9 33 4-36 7-39 (144)
340 3fmw_A Oxygenase; mithramycin, 95.1 0.015 5.2E-07 60.9 4.7 34 204-240 50-83 (570)
341 4at0_A 3-ketosteroid-delta4-5a 95.1 0.098 3.3E-06 53.9 10.8 34 204-240 42-75 (510)
342 3ic5_A Putative saccharopine d 95.0 0.018 6E-07 46.1 3.9 33 4-36 6-39 (118)
343 1d4d_A Flavocytochrome C fumar 95.0 0.11 3.6E-06 54.5 10.7 35 203-240 126-160 (572)
344 3c85_A Putative glutathione-re 94.9 0.025 8.6E-07 49.5 4.9 34 3-36 39-73 (183)
345 4e12_A Diketoreductase; oxidor 94.6 0.03 1E-06 52.9 5.0 36 1-36 2-37 (283)
346 3ihg_A RDME; flavoenzyme, anth 94.5 0.04 1.4E-06 57.2 6.1 34 204-240 6-39 (535)
347 3ghy_A Ketopantoate reductase 94.4 0.036 1.2E-06 53.8 5.0 35 1-35 1-35 (335)
348 3dfz_A SIRC, precorrin-2 dehyd 94.4 0.042 1.4E-06 49.6 5.0 34 2-35 30-63 (223)
349 3lk7_A UDP-N-acetylmuramoylala 94.3 0.037 1.2E-06 56.1 5.1 34 3-36 9-42 (451)
350 2qa2_A CABE, polyketide oxygen 94.3 0.059 2E-06 55.4 6.7 36 202-240 11-46 (499)
351 2x5o_A UDP-N-acetylmuramoylala 94.2 0.033 1.1E-06 56.2 4.4 36 3-38 5-40 (439)
352 3l4b_C TRKA K+ channel protien 94.1 0.038 1.3E-06 49.8 4.3 32 5-36 2-33 (218)
353 4dio_A NAD(P) transhydrogenase 94.1 0.049 1.7E-06 53.7 5.2 35 3-37 190-224 (405)
354 2dpo_A L-gulonate 3-dehydrogen 94.0 0.045 1.5E-06 52.6 4.8 35 2-36 5-39 (319)
355 2a9f_A Putative malic enzyme ( 94.0 0.048 1.6E-06 53.2 4.8 34 2-35 187-221 (398)
356 1bg6_A N-(1-D-carboxylethyl)-L 93.9 0.046 1.6E-06 53.4 4.9 36 1-36 2-37 (359)
357 3gpi_A NAD-dependent epimerase 93.9 0.059 2E-06 50.7 5.4 36 1-36 1-36 (286)
358 3i83_A 2-dehydropantoate 2-red 93.8 0.055 1.9E-06 52.1 4.9 33 4-36 3-35 (320)
359 1vl6_A Malate oxidoreductase; 93.8 0.055 1.9E-06 52.7 4.8 34 2-35 191-225 (388)
360 3gg2_A Sugar dehydrogenase, UD 93.7 0.054 1.8E-06 54.7 4.9 36 1-37 1-36 (450)
361 1kyq_A Met8P, siroheme biosynt 93.7 0.05 1.7E-06 50.8 4.2 34 3-36 13-46 (274)
362 3g79_A NDP-N-acetyl-D-galactos 93.6 0.064 2.2E-06 54.4 5.1 35 3-37 18-54 (478)
363 2ew2_A 2-dehydropantoate 2-red 93.6 0.059 2E-06 51.5 4.7 35 2-36 2-36 (316)
364 3p2y_A Alanine dehydrogenase/p 93.5 0.056 1.9E-06 52.9 4.4 34 3-36 184-217 (381)
365 3gvi_A Malate dehydrogenase; N 93.5 0.072 2.5E-06 51.2 5.1 36 1-36 5-41 (324)
366 3hn2_A 2-dehydropantoate 2-red 93.5 0.06 2E-06 51.6 4.5 32 4-35 3-34 (312)
367 1f0y_A HCDH, L-3-hydroxyacyl-C 93.3 0.081 2.8E-06 50.4 5.2 33 4-36 16-48 (302)
368 3k96_A Glycerol-3-phosphate de 93.2 0.083 2.8E-06 51.6 5.2 34 3-36 29-62 (356)
369 4huj_A Uncharacterized protein 93.2 0.042 1.4E-06 49.7 2.9 36 1-36 21-57 (220)
370 3kkj_A Amine oxidase, flavin-c 93.2 0.041 1.4E-06 50.8 2.9 33 205-240 4-36 (336)
371 2raf_A Putative dinucleotide-b 93.1 0.092 3.1E-06 47.0 5.0 35 3-37 19-53 (209)
372 3qha_A Putative oxidoreductase 93.1 0.072 2.5E-06 50.6 4.5 35 3-37 15-49 (296)
373 3p7m_A Malate dehydrogenase; p 93.1 0.097 3.3E-06 50.2 5.3 36 1-36 3-39 (321)
374 1hdo_A Biliverdin IX beta redu 93.0 0.099 3.4E-06 46.2 5.1 36 1-36 1-37 (206)
375 3g17_A Similar to 2-dehydropan 93.0 0.076 2.6E-06 50.4 4.5 33 4-36 3-35 (294)
376 2y0c_A BCEC, UDP-glucose dehyd 93.0 0.081 2.8E-06 53.9 4.9 34 3-36 8-41 (478)
377 2rcy_A Pyrroline carboxylate r 93.0 0.09 3.1E-06 48.8 4.8 37 1-37 2-42 (262)
378 1ks9_A KPA reductase;, 2-dehyd 93.0 0.092 3.1E-06 49.5 5.0 33 5-37 2-34 (291)
379 1chu_A Protein (L-aspartate ox 92.9 0.19 6.6E-06 52.1 7.7 32 205-240 10-41 (540)
380 3dtt_A NADP oxidoreductase; st 92.9 0.098 3.3E-06 48.1 5.0 35 3-37 19-53 (245)
381 4e21_A 6-phosphogluconate dehy 92.9 0.091 3.1E-06 51.3 4.9 35 2-36 21-55 (358)
382 1pjq_A CYSG, siroheme synthase 92.8 0.066 2.3E-06 54.3 3.9 35 200-237 9-43 (457)
383 3oj0_A Glutr, glutamyl-tRNA re 92.8 0.044 1.5E-06 45.8 2.2 33 4-36 22-54 (144)
384 2zyd_A 6-phosphogluconate dehy 92.7 0.091 3.1E-06 53.6 4.7 36 1-36 13-48 (480)
385 3tri_A Pyrroline-5-carboxylate 92.7 0.12 4E-06 48.6 5.2 36 1-36 1-39 (280)
386 3ado_A Lambda-crystallin; L-gu 92.6 0.087 3E-06 50.4 4.2 33 4-36 7-39 (319)
387 2hjr_A Malate dehydrogenase; m 92.6 0.12 4E-06 49.9 5.2 34 4-37 15-49 (328)
388 3tl2_A Malate dehydrogenase; c 92.6 0.11 3.6E-06 49.8 4.8 35 1-35 6-41 (315)
389 1x13_A NAD(P) transhydrogenase 92.6 0.092 3.2E-06 52.1 4.5 35 3-37 172-206 (401)
390 2ewd_A Lactate dehydrogenase,; 92.6 0.11 3.7E-06 49.9 4.9 36 1-36 1-38 (317)
391 1pzg_A LDH, lactate dehydrogen 92.5 0.11 3.9E-06 50.1 5.0 33 4-36 10-43 (331)
392 1t2d_A LDH-P, L-lactate dehydr 92.5 0.13 4.5E-06 49.4 5.3 34 3-36 4-38 (322)
393 1z82_A Glycerol-3-phosphate de 92.5 0.11 3.7E-06 50.3 4.8 33 4-36 15-47 (335)
394 3doj_A AT3G25530, dehydrogenas 92.3 0.12 4.2E-06 49.3 4.9 34 4-37 22-55 (310)
395 4a7p_A UDP-glucose dehydrogena 92.3 0.13 4.3E-06 51.9 5.1 35 3-37 8-42 (446)
396 1l7d_A Nicotinamide nucleotide 92.2 0.12 4.2E-06 51.0 5.0 34 3-36 172-205 (384)
397 1y56_A Hypothetical protein PH 92.2 0.24 8.2E-06 50.7 7.3 46 87-161 267-312 (493)
398 1x0v_A GPD-C, GPDH-C, glycerol 92.2 0.069 2.3E-06 52.1 3.1 37 1-37 6-49 (354)
399 3g0o_A 3-hydroxyisobutyrate de 92.1 0.13 4.6E-06 48.9 4.9 34 3-36 7-40 (303)
400 3pid_A UDP-glucose 6-dehydroge 92.0 0.13 4.4E-06 51.4 4.8 33 4-37 37-69 (432)
401 2vns_A Metalloreductase steap3 91.9 0.16 5.4E-06 45.7 4.9 33 4-36 29-61 (215)
402 3ius_A Uncharacterized conserv 91.9 0.13 4.6E-06 48.2 4.6 33 4-36 6-38 (286)
403 4gbj_A 6-phosphogluconate dehy 91.9 0.11 3.9E-06 49.3 4.1 36 1-37 4-39 (297)
404 3pef_A 6-phosphogluconate dehy 91.9 0.13 4.6E-06 48.4 4.6 34 4-37 2-35 (287)
405 2uyy_A N-PAC protein; long-cha 91.8 0.16 5.3E-06 48.7 5.1 34 3-36 30-63 (316)
406 1y6j_A L-lactate dehydrogenase 91.8 0.15 5.1E-06 48.9 4.9 34 3-36 7-42 (318)
407 3vtf_A UDP-glucose 6-dehydroge 91.8 0.13 4.5E-06 51.4 4.5 34 4-37 22-55 (444)
408 3eag_A UDP-N-acetylmuramate:L- 91.8 0.16 5.6E-06 48.8 5.2 34 3-36 4-38 (326)
409 2izz_A Pyrroline-5-carboxylate 91.8 0.15 5E-06 49.1 4.8 36 1-36 20-59 (322)
410 3mog_A Probable 3-hydroxybutyr 91.8 0.15 5.2E-06 51.9 5.1 35 2-36 4-38 (483)
411 4dll_A 2-hydroxy-3-oxopropiona 91.8 0.15 5.3E-06 48.9 4.9 33 4-36 32-64 (320)
412 3ego_A Probable 2-dehydropanto 91.8 0.15 5E-06 48.7 4.7 34 1-36 1-34 (307)
413 1zcj_A Peroxisomal bifunctiona 91.7 0.15 5.1E-06 51.7 5.0 34 3-36 37-70 (463)
414 2q3e_A UDP-glucose 6-dehydroge 91.7 0.13 4.3E-06 52.4 4.5 36 1-36 2-40 (467)
415 1lld_A L-lactate dehydrogenase 91.7 0.15 5.2E-06 48.8 4.8 33 4-36 8-42 (319)
416 1mv8_A GMD, GDP-mannose 6-dehy 91.6 0.13 4.5E-06 51.8 4.5 32 5-36 2-33 (436)
417 3k6j_A Protein F01G10.3, confi 91.6 0.17 5.8E-06 50.9 5.2 33 4-36 55-87 (460)
418 4ffl_A PYLC; amino acid, biosy 91.6 0.17 5.7E-06 49.5 5.1 34 4-37 2-35 (363)
419 1ur5_A Malate dehydrogenase; o 91.6 0.17 6E-06 48.2 5.0 33 4-36 3-36 (309)
420 4ezb_A Uncharacterized conserv 91.6 0.14 4.7E-06 49.2 4.3 33 4-36 25-58 (317)
421 2o3j_A UDP-glucose 6-dehydroge 91.5 0.14 4.7E-06 52.3 4.5 33 4-36 10-44 (481)
422 4gwg_A 6-phosphogluconate dehy 91.5 0.17 5.9E-06 51.4 5.1 37 1-37 2-38 (484)
423 1nyt_A Shikimate 5-dehydrogena 91.4 0.19 6.5E-06 46.9 5.1 33 3-35 119-151 (271)
424 1pjc_A Protein (L-alanine dehy 91.4 0.17 5.7E-06 49.6 4.8 33 4-36 168-200 (361)
425 3fi9_A Malate dehydrogenase; s 91.4 0.2 6.7E-06 48.5 5.2 35 1-35 6-43 (343)
426 3phh_A Shikimate dehydrogenase 91.4 0.19 6.6E-06 46.7 5.0 33 4-36 119-151 (269)
427 1zej_A HBD-9, 3-hydroxyacyl-CO 91.4 0.17 5.9E-06 47.8 4.7 33 3-36 12-44 (293)
428 1kyq_A Met8P, siroheme biosynt 91.4 0.11 3.6E-06 48.5 3.2 36 200-238 10-45 (274)
429 3e8x_A Putative NAD-dependent 91.4 0.18 6E-06 45.8 4.7 35 2-36 20-55 (236)
430 3d0o_A L-LDH 1, L-lactate dehy 91.3 0.18 6E-06 48.4 4.8 34 2-35 5-40 (317)
431 2v6b_A L-LDH, L-lactate dehydr 91.2 0.18 6.1E-06 48.1 4.7 33 4-36 1-35 (304)
432 2g1u_A Hypothetical protein TM 91.2 0.14 4.9E-06 43.2 3.6 39 199-240 15-53 (155)
433 3l6d_A Putative oxidoreductase 91.2 0.22 7.4E-06 47.5 5.2 34 3-36 9-42 (306)
434 3pdu_A 3-hydroxyisobutyrate de 91.1 0.15 5.1E-06 48.1 4.0 34 4-37 2-35 (287)
435 2iz1_A 6-phosphogluconate dehy 91.1 0.2 6.7E-06 51.0 5.1 36 1-36 3-38 (474)
436 2vhw_A Alanine dehydrogenase; 91.0 0.2 7E-06 49.2 5.0 34 3-36 168-201 (377)
437 3qsg_A NAD-binding phosphogluc 91.0 0.17 5.8E-06 48.4 4.3 33 3-35 24-57 (312)
438 2eez_A Alanine dehydrogenase; 91.0 0.21 7.1E-06 49.1 5.0 34 3-36 166-199 (369)
439 1jw9_B Molybdopterin biosynthe 90.9 0.19 6.5E-06 46.3 4.4 33 4-36 32-65 (249)
440 2egg_A AROE, shikimate 5-dehyd 90.9 0.22 7.7E-06 47.2 5.0 33 3-35 141-174 (297)
441 3ggo_A Prephenate dehydrogenas 90.9 0.24 8E-06 47.4 5.1 33 4-36 34-68 (314)
442 4g65_A TRK system potassium up 90.8 0.11 3.8E-06 52.6 2.9 35 3-37 3-37 (461)
443 1jay_A Coenzyme F420H2:NADP+ o 90.7 0.22 7.7E-06 44.4 4.7 32 5-36 2-34 (212)
444 1dlj_A UDP-glucose dehydrogena 90.7 0.17 5.9E-06 50.3 4.2 31 5-36 2-32 (402)
445 3l9w_A Glutathione-regulated p 90.6 0.23 8E-06 49.4 5.1 34 3-36 4-37 (413)
446 3i6i_A Putative leucoanthocyan 90.6 0.23 8E-06 48.0 5.0 36 1-36 8-44 (346)
447 1evy_A Glycerol-3-phosphate de 90.6 0.14 4.8E-06 50.2 3.3 32 5-36 17-48 (366)
448 1guz_A Malate dehydrogenase; o 90.5 0.24 8.2E-06 47.3 4.9 32 5-36 2-35 (310)
449 3dhn_A NAD-dependent epimerase 90.5 0.18 6.3E-06 45.3 3.9 37 1-37 1-39 (227)
450 3gt0_A Pyrroline-5-carboxylate 90.4 0.28 9.7E-06 45.0 5.1 35 1-36 1-39 (247)
451 3b1f_A Putative prephenate deh 90.4 0.21 7.2E-06 47.1 4.3 36 1-36 4-41 (290)
452 1pjq_A CYSG, siroheme synthase 90.3 0.23 7.8E-06 50.3 4.7 33 3-35 12-44 (457)
453 1vpd_A Tartronate semialdehyde 90.3 0.23 7.7E-06 47.1 4.5 33 4-36 6-38 (299)
454 2rir_A Dipicolinate synthase, 90.3 0.28 9.7E-06 46.5 5.1 33 3-35 157-189 (300)
455 2h78_A Hibadh, 3-hydroxyisobut 90.3 0.22 7.6E-06 47.2 4.4 33 4-36 4-36 (302)
456 3ew7_A LMO0794 protein; Q8Y8U8 90.2 0.29 9.8E-06 43.7 4.9 32 5-36 2-34 (221)
457 3d4o_A Dipicolinate synthase s 90.2 0.29 9.9E-06 46.3 5.1 33 3-35 155-187 (293)
458 3hwr_A 2-dehydropantoate 2-red 90.2 0.25 8.7E-06 47.3 4.7 32 3-35 19-50 (318)
459 2vvm_A Monoamine oxidase N; FA 90.1 0.41 1.4E-05 48.8 6.6 40 95-161 272-311 (495)
460 3hwr_A 2-dehydropantoate 2-red 90.1 0.26 9E-06 47.2 4.8 36 200-239 16-51 (318)
461 3q2o_A Phosphoribosylaminoimid 89.9 0.33 1.1E-05 47.9 5.5 35 3-37 14-48 (389)
462 1p77_A Shikimate 5-dehydrogena 89.9 0.24 8.1E-06 46.3 4.1 33 3-35 119-151 (272)
463 1txg_A Glycerol-3-phosphate de 89.8 0.24 8.2E-06 47.7 4.3 30 5-34 2-31 (335)
464 1ff9_A Saccharopine reductase; 89.8 0.26 8.9E-06 49.7 4.7 36 1-36 1-36 (450)
465 3cky_A 2-hydroxymethyl glutara 89.8 0.27 9.3E-06 46.5 4.6 34 3-36 4-37 (301)
466 3pqe_A L-LDH, L-lactate dehydr 89.7 0.28 9.7E-06 47.0 4.6 33 4-36 6-40 (326)
467 2gf2_A Hibadh, 3-hydroxyisobut 89.6 0.29 9.9E-06 46.2 4.7 32 5-36 2-33 (296)
468 2z1m_A GDP-D-mannose dehydrata 89.6 0.32 1.1E-05 46.8 5.1 37 1-37 1-38 (345)
469 3don_A Shikimate dehydrogenase 89.6 0.28 9.6E-06 45.9 4.4 34 3-36 117-151 (277)
470 1a5z_A L-lactate dehydrogenase 89.6 0.26 9E-06 47.2 4.3 33 4-36 1-35 (319)
471 3oz2_A Digeranylgeranylglycero 89.6 0.18 6.3E-06 49.4 3.3 33 205-240 6-38 (397)
472 4b4o_A Epimerase family protei 89.4 0.37 1.3E-05 45.5 5.2 36 4-39 1-37 (298)
473 2pv7_A T-protein [includes: ch 89.4 0.33 1.1E-05 46.0 4.8 33 4-36 22-55 (298)
474 2f1k_A Prephenate dehydrogenas 89.3 0.33 1.1E-05 45.4 4.7 32 5-36 2-33 (279)
475 3h2s_A Putative NADH-flavin re 89.2 0.37 1.3E-05 43.1 4.8 32 5-36 2-34 (224)
476 3g5s_A Methylenetetrahydrofola 89.1 0.19 6.6E-06 49.3 2.9 34 204-240 2-35 (443)
477 3vps_A TUNA, NAD-dependent epi 89.1 0.39 1.3E-05 45.6 5.1 35 3-37 7-42 (321)
478 3gvp_A Adenosylhomocysteinase 89.0 0.33 1.1E-05 48.0 4.6 34 3-36 220-253 (435)
479 2hk9_A Shikimate dehydrogenase 89.0 0.32 1.1E-05 45.5 4.3 32 4-35 130-161 (275)
480 3nrn_A Uncharacterized protein 89.0 0.19 6.5E-06 50.2 2.9 53 327-380 192-247 (421)
481 2cvz_A Dehydrogenase, 3-hydrox 89.0 0.32 1.1E-05 45.7 4.4 32 4-36 2-33 (289)
482 2aef_A Calcium-gated potassium 89.0 0.16 5.4E-06 46.2 2.2 33 3-36 9-41 (234)
483 2p4q_A 6-phosphogluconate dehy 88.9 0.39 1.3E-05 49.0 5.2 34 4-37 11-44 (497)
484 4aj2_A L-lactate dehydrogenase 88.8 0.44 1.5E-05 45.8 5.2 33 3-35 19-53 (331)
485 1qyc_A Phenylcoumaran benzylic 88.8 0.42 1.4E-05 45.1 5.2 36 1-36 1-38 (308)
486 1yqg_A Pyrroline-5-carboxylate 88.8 0.34 1.2E-05 44.8 4.3 32 5-36 2-34 (263)
487 2dvm_A Malic enzyme, 439AA lon 88.7 0.41 1.4E-05 47.7 5.1 31 3-33 186-219 (439)
488 2g5c_A Prephenate dehydrogenas 88.6 0.4 1.4E-05 44.9 4.8 33 4-36 2-36 (281)
489 3jyo_A Quinate/shikimate dehyd 88.6 0.46 1.6E-05 44.6 5.1 33 3-35 127-160 (283)
490 3vku_A L-LDH, L-lactate dehydr 88.6 0.41 1.4E-05 45.9 4.8 34 3-36 9-44 (326)
491 1hyh_A L-hicdh, L-2-hydroxyiso 88.6 0.34 1.2E-05 46.2 4.3 33 4-36 2-36 (309)
492 3ond_A Adenosylhomocysteinase; 88.6 0.43 1.5E-05 48.1 5.1 34 3-36 265-298 (488)
493 3k5i_A Phosphoribosyl-aminoimi 88.6 0.4 1.4E-05 47.6 5.0 35 1-36 22-56 (403)
494 3ojo_A CAP5O; rossmann fold, c 88.6 0.34 1.2E-05 48.4 4.3 34 4-37 12-45 (431)
495 3tnl_A Shikimate dehydrogenase 88.5 0.48 1.6E-05 45.2 5.2 33 3-35 154-187 (315)
496 1yj8_A Glycerol-3-phosphate de 88.5 0.3 1E-05 48.0 3.9 34 4-37 22-62 (375)
497 1oju_A MDH, malate dehydrogena 88.5 0.36 1.2E-05 45.6 4.3 33 4-36 1-35 (294)
498 1leh_A Leucine dehydrogenase; 88.5 0.46 1.6E-05 46.3 5.1 32 3-34 173-204 (364)
499 3o8q_A Shikimate 5-dehydrogena 88.4 0.48 1.6E-05 44.4 5.1 33 3-35 126-159 (281)
500 3orq_A N5-carboxyaminoimidazol 88.4 0.5 1.7E-05 46.4 5.5 35 3-37 12-46 (377)
No 1
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=6.5e-54 Score=450.53 Aligned_cols=460 Identities=18% Similarity=0.295 Sum_probs=318.2
Q ss_pred CCcEEEECCChhHHHHHHHHH-hcCCceEEEecCCCccccccc-cccceeecCCccceeecCCC----CCCCCCCCCCCh
Q 009917 3 KKQIAIVGAGVSGLLACKYLL-LKGFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLYQFSDYP----WPDSVTTDFPDH 76 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~-~~g~~v~i~e~~~~~Gg~w~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 76 (522)
.++|+|||||++|+++|..|+ +.|++|+|||+++.+||+|.. .||++++++|...|.|+..+ .+. +...|+++
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~-~~~~~~~~ 86 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQEST-WKTTYITQ 86 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCC-CSBSEEEH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCC-CcccCCCH
Confidence 368999999999999999999 899999999999999999997 89999999999999888542 112 25678889
Q ss_pred hHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEE
Q 009917 77 NQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVIL 156 (522)
Q Consensus 77 ~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvv 156 (522)
.++.+|+.++++++++.++++++++|+++++++ ..+.|.|++.++ +++.||+||+
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~--------------------~~~~~~V~~~~G-----~~i~ad~lV~ 141 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFKFGTEVTSALYLD--------------------DENLWEVTTDHG-----EVYRAKYVVN 141 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEESCCEEEEEEET--------------------TTTEEEEEETTS-----CEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCcceeEeccEEEEEEEeC--------------------CCCEEEEEEcCC-----CEEEeCEEEE
Confidence 999999999999999988999999999999876 235799998876 4789999999
Q ss_pred eecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEE
Q 009917 157 CVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLY 236 (522)
Q Consensus 157 AtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~ 236 (522)
|||.+ +.|++|++| |++.|.|.++|+..|.. ..+..+|+|+|||+|.||+|+|.+|++.+. +||+++
T Consensus 142 AtG~~-s~p~~p~ip---G~~~f~g~~~~~~~~~~------~~~~~~krV~VIG~G~sgve~a~~l~~~~~---~Vtv~~ 208 (540)
T 3gwf_A 142 AVGLL-SAINFPNLP---GLDTFEGETIHTAAWPE------GKSLAGRRVGVIGTGSTGQQVITSLAPEVE---HLTVFV 208 (540)
T ss_dssp CCCSC-CSBCCCCCT---TGGGCCSEEEEGGGCCS------SCCCTTSEEEEECCSHHHHHHHHHHTTTCS---EEEEEE
T ss_pred CCccc-ccCCCCCCC---CccccCCCEEEeecCCC------ccccccceEEEECCCchHHHHHHHHHhhCC---EEEEEE
Confidence 99998 589999999 99999999999999986 245789999999999999999999998764 599999
Q ss_pred cccceeecCCCCCCCchhhHHHHHHH----HH---hhcC-CC----------------h--hHHHHH------HHh----
Q 009917 237 RTEHWNIPDYFPWGFPLAYLYLNRFA----EL---LVHK-PG----------------E--GFLLSL------LAT---- 280 (522)
Q Consensus 237 r~~~~~~p~~~~~g~p~~~~~~~r~~----~~---~~~~-~~----------------~--~~~~~~------~~~---- 280 (522)
|++.|++|... .++.......+. .. .... .+ . ..+... +..
T Consensus 209 r~~~~i~p~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~ 285 (540)
T 3gwf_A 209 RTPQYSVPVGN---RPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGT 285 (540)
T ss_dssp SSCCCEEECCC---CBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTS
T ss_pred CCCCccccCcc---CCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhh
Confidence 99999999865 222222111111 11 0000 00 0 000000 000
Q ss_pred -----hhhhhHHHHHHHHHHHHhhhc--cccccCCCCCCcccccccccceeccCCcccccccCCcEEEe---ecCceeEe
Q 009917 281 -----MLSPLRWAISKFVEADIKKKH--RLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILK---KSQDFSFC 350 (522)
Q Consensus 281 -----~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~---~~~i~~~~ 350 (522)
....++....+++...++..+ +.....|.|+ ++ +|++++++++|++++++++|+++ ...|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~-~~-----g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it 359 (540)
T 3gwf_A 286 FGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPK-GL-----FAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVT 359 (540)
T ss_dssp CSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCC-SC-----CCSSCEEESSTGGGGGSTTEEEEETTTSCEEEEC
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCC-CC-----CccccCCCccHHHHhcCCCEEEEeCCCCCccEEe
Confidence 012233444555555555443 2344567887 65 99999999999999999999999 67799999
Q ss_pred cCcEEEcCCCceecccEEEEecCCCCCcccccccc---c--ccccccccCCCCCCcccceeecCCCCCceEEE-cccC-C
Q 009917 351 EDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFL---S--QTFQDYLAGSPTEKLPLYREIIHPQIPQLAII-GFSE-S 423 (522)
Q Consensus 351 ~~gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~---~--~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~i-G~~~-~ 423 (522)
++||+++||++ +++|+||+||||+++..++..+. . ..+.+.+. +....|++++.+++||+|++ |... .
T Consensus 360 ~~gv~~~dG~~-~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~----~~~~~y~g~~v~gfPN~f~~~Gp~~~~ 434 (540)
T 3gwf_A 360 AKGVVTEDGVL-HELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWD----GQPTSYLGVSTANFPNWFMVLGPNGPF 434 (540)
T ss_dssp SSEEEETTCCE-EECSEEEECCCBSCSSHHHHTSEEECGGGCBHHHHTS----SSCCCBTTTBCTTCTTEEESSCSSCBC
T ss_pred cCeEEcCCCCE-EECCEEEECCccCccccCcCcceEECCCCcCHHHhhc----cChhhccccccCCCCceEEEecCCCCC
Confidence 99999999998 99999999999999863222111 0 12333333 23468999999999999999 5332 3
Q ss_pred cchhhhHHHHHHHHHHHHcCCC--CCCCHHHHHHHHHHHHHHHHHhcCCCCCCccceeeceecHHHH--HH--HcCCCCC
Q 009917 424 ISNLYTSEMRCRWLAELLDGAV--KLPSIKEMEEDMRKWDEYMKRYSGKYYRRSCIGALHIWYNDQL--CK--DMGWNPK 497 (522)
Q Consensus 424 ~~~~~~~e~qa~~ia~~l~g~~--~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~l--~~--~~g~~~~ 497 (522)
.+.+..+|.|++|++++|+... ...+.+...+..++|++.+.+...+ +.+..|.+||++.= .+ ....-|.
T Consensus 435 ~s~~~~~e~q~~~i~~~i~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~----t~~~~~~swy~~~~~~g~~~~~~~~p~ 510 (540)
T 3gwf_A 435 TNLPPSIETQVEWISDTIGYAERNGVRAIEPTPEAEAEWTETCTEIANA----TLFTKGDSWIFGANIPGKKPSVLFYLG 510 (540)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHTT----SCC------------------CCCBCS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHCCCeEEEECHHHHHHHHHHHHHHHhC----CCccCCCcceeCCCCCCCCceEeeCCC
Confidence 4557789999999999885211 1112222222233455444443321 11223789998742 11 1122222
Q ss_pred CCchhhhhhhccCCCcCCCCCCC
Q 009917 498 RKKGWFAELFEPYGPVDYAPPST 520 (522)
Q Consensus 498 ~~~~~~~~~~~p~~~~~y~~~~~ 520 (522)
....++ +...-..++||.|+..
T Consensus 511 ~~~~~~-~~~~~~~~~~~~g~~~ 532 (540)
T 3gwf_A 511 GLRNYR-AVMAEVAADGYRGFEV 532 (540)
T ss_dssp CHHHHH-HHHHHHHHTTSTTEEE
T ss_pred CHHHHH-HHHhccchhcCCCeEe
Confidence 211222 2233334578988754
No 2
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=1.8e-53 Score=447.61 Aligned_cols=394 Identities=20% Similarity=0.355 Sum_probs=296.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc-cccceeecCCccceeecCCCCC---CCCCCCCCChhH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLYQFSDYPWP---DSVTTDFPDHNQ 78 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 78 (522)
.++|+|||||++|+++|..|++.|++|+|||+++.+||+|.. +||+++++++...|+|+..|.+ ..+...|++..+
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~e 88 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPE 88 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHH
Confidence 468999999999999999999999999999999999999987 9999999999999988765532 123677889999
Q ss_pred HHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 79 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
+.+|++.+++++++.++++++++|+++++++ ..+.|.|++.++ +++.||+||+||
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~--------------------~~~~w~V~~~~G-----~~~~ad~lV~At 143 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVE--------------------NDRLWEVTLDNE-----EVVTCRFLISAT 143 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEG--------------------GGTEEEEEETTT-----EEEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeC--------------------CCCEEEEEECCC-----CEEEeCEEEECc
Confidence 9999999999999988999999999999875 235799999876 679999999999
Q ss_pred cccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHh-hhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEc
Q 009917 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEA-AANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYR 237 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~-~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r 237 (522)
|.+ +.|+.|++| |++.|.|..+|+..|....... ...+..+|+|+|||+|.||+|+|.+|++.+. +||+++|
T Consensus 144 G~~-s~p~~p~ip---G~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~---~Vtv~~r 216 (545)
T 3uox_A 144 GPL-SASRMPDIK---GIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAK---ELYVFQR 216 (545)
T ss_dssp CSC-BC---CCCT---TGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBS---EEEEEES
T ss_pred CCC-CCCcCCCCC---CccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCC---EEEEEEc
Confidence 988 589999999 9999999999999987520000 0035689999999999999999999998764 5999999
Q ss_pred ccceeecCCCCCCCchhhHHHH----HHHHHh---hcC-CCh------------------hHHHHH---------HH---
Q 009917 238 TEHWNIPDYFPWGFPLAYLYLN----RFAELL---VHK-PGE------------------GFLLSL---------LA--- 279 (522)
Q Consensus 238 ~~~~~~p~~~~~g~p~~~~~~~----r~~~~~---~~~-~~~------------------~~~~~~---------~~--- 279 (522)
+|.|++|... .++...... .+.... ... ... ..+... ..
T Consensus 217 ~~~~i~p~~~---~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~ 293 (545)
T 3uox_A 217 TPNWCTPLGN---SPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFR 293 (545)
T ss_dssp SCCCCEECCC---CBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBT
T ss_pred CCCccccCCc---CCCCHHHHHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhh
Confidence 9999999865 222221111 111111 000 000 000000 00
Q ss_pred h--hhhhhHHHHHHHHHHHHhhhc--cccccCCCC-CCcccccccccceeccCCcccccccCCcEEEe---ecCceeEec
Q 009917 280 T--MLSPLRWAISKFVEADIKKKH--RLAKFGMVP-KHSFLQELSSCLTITVPEKFYDKVEEGSIILK---KSQDFSFCE 351 (522)
Q Consensus 280 ~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~p-~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~---~~~i~~~~~ 351 (522)
. ..........++++..++..+ +.....|.| ++++ +|+|++++++|++++++++|+++ .+.|+++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~-----g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~ 368 (545)
T 3uox_A 294 DLLLNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPF-----GAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTP 368 (545)
T ss_dssp TTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHTSCSSSCT-----TSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEET
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCC-----CCCccCCCccHHHHhcCCCEEEEecCCCCceEEcc
Confidence 0 012233444555555555544 344466889 6887 99999999999999999999999 577999999
Q ss_pred CcEEEcCCCceecccEEEEecCCCCCcccccccc-----cccccccccCCCCCCcccceeecCCCCCceEEEcccCC---
Q 009917 352 DGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFL-----SQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES--- 423 (522)
Q Consensus 352 ~gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~-----~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~--- 423 (522)
+||+++|| + +++|+||+||||+++......+. ...+.+.|.. ....|++++.+++||+|++..+++
T Consensus 369 ~gv~~~dG-~-~~~D~IV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~----~~~~y~g~~~~gfPN~f~~~gp~~~~~ 442 (545)
T 3uox_A 369 EGIKTADA-A-YDLDVIIYATGFDAVTGSLDRIDIRGKDNVRLIDAWAE----GPSTYLGLQARGFPNFFTLVGPHNGST 442 (545)
T ss_dssp TEEEESSC-E-EECSEEEECCCCBSSSCSCTTSEEECGGGCBHHHHTTT----SCCCBTTTBCTTCTTEEECSSGGGTGG
T ss_pred CeEEeCCC-e-eecCEEEECCccccccccCCCceEECCCCccHHHhhcc----ccceeeccccCCCCcEEEEeCCCCCCc
Confidence 99999999 7 99999999999997543221111 1123334432 345899999999999999865443
Q ss_pred -cchhhhHHHHHHHHHHHHc
Q 009917 424 -ISNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 424 -~~~~~~~e~qa~~ia~~l~ 442 (522)
.+.+..+|.|++|++++|+
T Consensus 443 ~~s~~~~~e~~~~~i~~~i~ 462 (545)
T 3uox_A 443 FCNVGVCGGLQAEWVLRMIS 462 (545)
T ss_dssp GSCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHH
Confidence 3456789999999999885
No 3
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=1.6e-53 Score=448.39 Aligned_cols=387 Identities=22% Similarity=0.355 Sum_probs=296.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc-cccceeecCCccceeecCCC----CCCCCCCCCCChhH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLYQFSDYP----WPDSVTTDFPDHNQ 78 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 78 (522)
++|+|||||++|+++|..|++.|++|+|||+++.+||+|.. .||++++++|...|+|+..+ .+. +...|+++.+
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~-~~~~~~~~~e 100 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWN-WSEKYATQPE 100 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCC-CSSSSCBHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCC-CccCCCCHHH
Confidence 68999999999999999999999999999999999999996 99999999999999988542 112 2577889999
Q ss_pred HHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 79 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
+.+|++.+++++++.++++++++|+++++++ ..+.|.|++.++ +++.||+||+||
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~--------------------~~~~w~V~~~~G-----~~i~ad~lV~At 155 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDE--------------------EGLRWTVRTDRG-----DEVSARFLVVAA 155 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEET--------------------TTTEEEEEETTC-----CEEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcC--------------------CCCEEEEEECCC-----CEEEeCEEEECc
Confidence 9999999999999988999999999999876 235799998776 478999999999
Q ss_pred cccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcc
Q 009917 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~ 238 (522)
|.+ +.|+.|++| |++.|.|.++|+..|... ..++.+|+|+|||+|.||+|+|.+|++.+. +||+++|+
T Consensus 156 G~~-s~p~~p~ip---G~~~f~g~~~~~~~~~~~-----~~~~~~krV~VIG~G~sgve~a~~l~~~~~---~Vtv~~r~ 223 (549)
T 4ap3_A 156 GPL-SNANTPAFD---GLDRFTGDIVHTARWPHD-----GVDFTGKRVGVIGTGSSGIQSIPIIAEQAE---QLFVFQRS 223 (549)
T ss_dssp CSE-EECCCCCCT---TGGGCCSEEEEGGGCCTT-----CCCCBTCEEEEECCSHHHHHHHHHHHHHBS---EEEEEESS
T ss_pred CCC-CCCCCCCCC---CcccCCCceEEecccccc-----ccccCCCEEEEECCCchHHHHHHHHHhhCC---EEEEEECC
Confidence 987 589999999 999999999999999831 245789999999999999999999999875 49999999
Q ss_pred cceeecCCCCCCCchhhHHHHHH----H---HHhhcC----C------------Ch---hHHHHH-----HH-------h
Q 009917 239 EHWNIPDYFPWGFPLAYLYLNRF----A---ELLVHK----P------------GE---GFLLSL-----LA-------T 280 (522)
Q Consensus 239 ~~~~~p~~~~~g~p~~~~~~~r~----~---~~~~~~----~------------~~---~~~~~~-----~~-------~ 280 (522)
+.|++|... .++.......+ . ...... . .+ ..+... +. .
T Consensus 224 ~~~ilp~~~---~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~ 300 (549)
T 4ap3_A 224 ANYSIPAGN---VPLDDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQ 300 (549)
T ss_dssp CCCEEECC-------CHHHHHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTT
T ss_pred CCccccCcC---CCCCHHHHHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhh
Confidence 999999865 22221111111 1 110000 0 00 000000 00 0
Q ss_pred -hhhhhHHHHHHHHHHHHhhhc--cccccCCCCC-CcccccccccceeccCCcccccccCCcEEEe---ecCceeEecCc
Q 009917 281 -MLSPLRWAISKFVEADIKKKH--RLAKFGMVPK-HSFLQELSSCLTITVPEKFYDKVEEGSIILK---KSQDFSFCEDG 353 (522)
Q Consensus 281 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~p~-~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~---~~~i~~~~~~g 353 (522)
..........++++..++..+ +.....|.|+ +++ +|++++++++|++++++++|+++ .+.|++++++|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~-----~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~g 375 (549)
T 4ap3_A 301 LTDPAANDTARAFWEEKIRAVVDDPAVAELLTPKDHAI-----GAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETG 375 (549)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCSSCCB-----TTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTE
T ss_pred hcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCC-----CccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCc
Confidence 012234445555555555543 3344567887 877 99999999999999999999999 77899999999
Q ss_pred EEEcCCCceecccEEEEecCCCCCcccccccc-----cccccccccCCCCCCcccceeecCCCCCceEEEcccC----Cc
Q 009917 354 IVVDGQTTPLKTDLVILATGFKGDVKLKNIFL-----SQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSE----SI 424 (522)
Q Consensus 354 v~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~-----~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~----~~ 424 (522)
|+++|| + +++|+||+||||+++..++..+. ...+.+.+.. ....|++++.+++||+|++..++ ..
T Consensus 376 v~~~dG-~-~~~D~iI~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~----~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~ 449 (549)
T 4ap3_A 376 IVTTGA-H-YDLDMIVLATGFDAMTGSLDKLEIVGRGGRTLKETWAA----GPRTYLGLGIDGFPNFFNLTGPGSPSVLA 449 (549)
T ss_dssp EEESSC-E-EECSEEEECCCEEESSTTGGGSEEECGGGCBHHHHTTT----SCCCBTTTBCTTCTTEEETTCTTSCGGGS
T ss_pred EEeCCC-c-eecCEEEECCcccccccccCceeEECCCCcCHHHhhcc----chhhccccccCCCCcEEEEeCCCCCCcCc
Confidence 999999 7 99999999999998753221111 0123333432 34689999999999999985444 23
Q ss_pred chhhhHHHHHHHHHHHHc
Q 009917 425 SNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 425 ~~~~~~e~qa~~ia~~l~ 442 (522)
+.+..+|.|++|++++|+
T Consensus 450 s~~~~~e~~~~~i~~~i~ 467 (549)
T 4ap3_A 450 NMVLHSELHVDWVADAIA 467 (549)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 456789999999999885
No 4
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=1.2e-51 Score=427.32 Aligned_cols=385 Identities=24% Similarity=0.366 Sum_probs=301.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHh---cCCc---eEEEecCCCccccccc----------------cccceeecCCccce
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLL---KGFH---PIVFEARSDIGGAWIK----------------TVETTMLQTPKQLY 58 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~---~g~~---v~i~e~~~~~Gg~w~~----------------~~~~~~~~~~~~~~ 58 (522)
|. ++|+|||||++||++|+.|++ .|++ |+|||+++.+||+|.+ .|+.+..+.+...+
T Consensus 1 M~-~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~ 79 (464)
T 2xve_A 1 MA-TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECL 79 (464)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGT
T ss_pred CC-CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhc
Confidence 54 699999999999999999999 9999 9999999999999985 35667778888888
Q ss_pred eecCCCCCCC---CCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEE
Q 009917 59 QFSDYPWPDS---VTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT 135 (522)
Q Consensus 59 ~~~~~~~~~~---~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (522)
.|+++|++.. +...|+++.++.+|++++++++++.+.++++++|+++++.. ..+.|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~--------------------~~~~~~ 139 (464)
T 2xve_A 80 EFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNE--------------------DSQTFT 139 (464)
T ss_dssp CBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEET--------------------TTTEEE
T ss_pred ccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcC--------------------CCCcEE
Confidence 9998887531 13678899999999999999999966699999999999865 124699
Q ss_pred EEEecCCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCH
Q 009917 136 VAVEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSA 215 (522)
Q Consensus 136 v~~~~~~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg 215 (522)
|++.++.+|+..++.||+||+|||++ +.|++|.+| |.+.|.|.++|+.+|++. ..+.+|+|+|||+|.||
T Consensus 140 V~~~~~~~g~~~~~~~d~VVvAtG~~-s~p~~p~ip---G~~~~~g~~~hs~~~~~~------~~~~~k~VvVVG~G~sg 209 (464)
T 2xve_A 140 VTVQDHTTDTIYSEEFDYVVCCTGHF-STPYVPEFE---GFEKFGGRILHAHDFRDA------LEFKDKTVLLVGSSYSA 209 (464)
T ss_dssp EEEEETTTTEEEEEEESEEEECCCSS-SSBCCCCCB---TTTTCCSEEEEGGGCCCG------GGGTTSEEEEECCSTTH
T ss_pred EEEEEcCCCceEEEEcCEEEECCCCC-CCCccCCCC---CcccCCceEEehhhhCCH------hHcCCCEEEEEcCCCCH
Confidence 99987544656789999999999998 589999999 999999999999999873 45789999999999999
Q ss_pred HHHHHHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHH
Q 009917 216 LDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEA 295 (522)
Q Consensus 216 ~dia~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (522)
+|+|.+|+..+. +|+++.|++. +++..
T Consensus 210 ~eiA~~l~~~g~---~V~li~~~~~-~~~~~------------------------------------------------- 236 (464)
T 2xve_A 210 EDIGSQCYKYGA---KKLISCYRTA-PMGYK------------------------------------------------- 236 (464)
T ss_dssp HHHHHHHHHTTC---SEEEEECSSC-CCCCC-------------------------------------------------
T ss_pred HHHHHHHHHhCC---eEEEEEECCC-CCCCC-------------------------------------------------
Confidence 999999999875 4999998765 21110
Q ss_pred HHhhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecCceeEecCcEEEcCCCceecccEEEEecCCC
Q 009917 296 DIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQDFSFCEDGIVVDGQTTPLKTDLVILATGFK 375 (522)
Q Consensus 296 ~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~i~~~~~~gv~~~dG~~~~~~D~VI~aTG~~ 375 (522)
+ ..+|+++ ..|+++++++|+|+||++ +++|.||+||||+
T Consensus 237 --------------------------------------~-~~~V~~~-~~V~~i~~~~V~~~dG~~-i~~D~Vi~atG~~ 275 (464)
T 2xve_A 237 --------------------------------------W-PENWDER-PNLVRVDTENAYFADGSS-EKVDAIILCTGYI 275 (464)
T ss_dssp --------------------------------------C-CTTEEEC-SCEEEECSSEEEETTSCE-EECSEEEECCCBC
T ss_pred --------------------------------------C-CCceEEc-CCeEEEeCCEEEECCCCE-EeCCEEEECCCCC
Confidence 0 1245555 457888888999999998 9999999999999
Q ss_pred CCcccccccccccccccccCCCC-CCcccceeecCCCCCceEEEcccCCcchhhhHHHHHHHHHHHHcCCCCCCCHHHHH
Q 009917 376 GDVKLKNIFLSQTFQDYLAGSPT-EKLPLYREIIHPQIPQLAIIGFSESISNLYTSEMRCRWLAELLDGAVKLPSIKEME 454 (522)
Q Consensus 376 ~~~~l~~~~~~~~l~~~~~~~~~-~~~~ly~~~~~~~~pnl~~iG~~~~~~~~~~~e~qa~~ia~~l~g~~~lp~~~~~~ 454 (522)
++.++++.- +. +..+.. ...++|++++.++.|||||+|.+.....++.+|.||+|+|++|.|+.+||+.++|.
T Consensus 276 p~~~~l~~~----~g--l~~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~qa~~~a~~l~G~~~lP~~~~m~ 349 (464)
T 2xve_A 276 HHFPFLNDD----LR--LVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWYARDVIMGRLPLPSKEEMK 349 (464)
T ss_dssp CCCTTBCTT----TC--CCCCSSSCCSSEETTTEESSSTTEEECSCSCCSSCHHHHHHHHHHHHHHHTTSSCCCCHHHHH
T ss_pred CCCCCcCcc----cc--cccCCCcccccccceEecCCCCCEEEEeCcccccchHHHHHHHHHHHHHHcCCCCCcCHHHHH
Confidence 997654320 00 111122 12368999899999999999987766678899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCccceeeceecHHHHHHHcCCCCCCCchhhhhh-----------hccCCCcCCCCCCCC
Q 009917 455 EDMRKWDEYMKRYSGKYYRRSCIGALHIWYNDQLCKDMGWNPKRKKGWFAEL-----------FEPYGPVDYAPPSTS 521 (522)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~l~~~~g~~~~~~~~~~~~~-----------~~p~~~~~y~~~~~~ 521 (522)
+++++|.+. .+.... ..++. . ....|+|+|++++|+++.++. |+.++ ...|.-.+|+.+.+.
T Consensus 350 ~~~~~~~~~-~~~~~~-~~~~~-~-~~~~Y~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 422 (464)
T 2xve_A 350 ADSMAWREK-ELTLVT-AEEMY-T-YQGDYIQNLIDMTDYPSFDIP-ATNKTFLEWKHHKKENIMTFRDHSYRSLMTG 422 (464)
T ss_dssp HHHHHHHHH-HHTCCS-HHHHH-H-HHHHHHHHHHTTSSSCCCCHH-HHHHHHHHHHHHHHHCTTTGGGCCCBCTTTC
T ss_pred HHHHHHHHH-hhccCC-CCCcc-c-cHHHHHHHHHHHcCCCCCChH-HHHHHHHHHHHHHHhchhhhcccceeEecCc
Confidence 988887652 221100 01111 0 034799999999999877543 33332 346777778766543
No 5
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=7.1e-50 Score=422.28 Aligned_cols=432 Identities=21% Similarity=0.318 Sum_probs=313.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc-cccceeecCCccceeecCCCCC---CCCCCCCCChhH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLYQFSDYPWP---DSVTTDFPDHNQ 78 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 78 (522)
..||+|||||++|+++|..|++.|++|+|||+++.+||+|.. +||+++++.+...|+|++.|.. ..+...|+++.+
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 95 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPE 95 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHH
Confidence 368999999999999999999999999999999999999987 8999999999988887754310 012467889999
Q ss_pred HHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 79 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
+.+|++.+++++++..+++++++|+++++++ +.+.|.|++.++ +++.||+||+||
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~--------------------~~~~w~V~~~~G-----~~~~ad~vV~At 150 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDE--------------------ATNTWTVDTNHG-----DRIRARYLIMAS 150 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEET--------------------TTTEEEEEETTC-----CEEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcC--------------------CCCeEEEEECCC-----CEEEeCEEEECc
Confidence 9999999999999877899999999999875 135699998765 478999999999
Q ss_pred cccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcc
Q 009917 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~ 238 (522)
|.. +.|++|++| |++.|.|.++|+..|... ..++++|+|+|||+|.||+|++.+++..+. +|++++|+
T Consensus 151 G~~-s~p~~p~i~---G~~~f~G~~~hs~~~~~~-----~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~---~vtv~~r~ 218 (542)
T 1w4x_A 151 GQL-SVPQLPNFP---GLKDFAGNLYHTGNWPHE-----PVDFSGQRVGVIGTGSSGIQVSPQIAKQAA---ELFVFQRT 218 (542)
T ss_dssp CSC-CCCCCCCCT---TGGGCCSEEEEGGGCCSS-----CCCCBTCEEEEECCSHHHHHHHHHHHHHBS---EEEEEESS
T ss_pred CCC-CCCCCCCCC---CcccCCCceEECCCCCCc-----hhccCCCEEEEECCCccHHHHHHHHhhcCc---eEEEEEcC
Confidence 998 589999999 999999999999999731 234789999999999999999999999865 49999999
Q ss_pred cceeecCCCCCCCchh-hHH---HHHHHHHhhc-CCC------------------hhHHHHHHH-----------hh--h
Q 009917 239 EHWNIPDYFPWGFPLA-YLY---LNRFAELLVH-KPG------------------EGFLLSLLA-----------TM--L 282 (522)
Q Consensus 239 ~~~~~p~~~~~g~p~~-~~~---~~r~~~~~~~-~~~------------------~~~~~~~~~-----------~~--~ 282 (522)
+.|++|.....-.+.. ..+ ...+...... ..+ ..++..... .+ .
T Consensus 219 ~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 298 (542)
T 1w4x_A 219 PHFAVPARNAPLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRD 298 (542)
T ss_dssp CCCEEECCCCBCCHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTC
T ss_pred CcccccCCCCCCCHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcC
Confidence 9998887541111100 001 1111111100 000 000111000 00 0
Q ss_pred hhhHHHHHHHHHHHHhhhc--cccccCCCC-CCcccccccccceeccCCcccccccCCcEEEe---ecCceeEecCcEEE
Q 009917 283 SPLRWAISKFVEADIKKKH--RLAKFGMVP-KHSFLQELSSCLTITVPEKFYDKVEEGSIILK---KSQDFSFCEDGIVV 356 (522)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~p-~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~---~~~i~~~~~~gv~~ 356 (522)
........+++...++..+ +.....|.| ++++ +|++++++++|++++++++|+++ ...|+++++++|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~-----~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~ 373 (542)
T 1w4x_A 299 RDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPF-----GTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRT 373 (542)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSHHHHHHHSCCSSCS-----SSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEE
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHhcCCCCCCc-----cccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEe
Confidence 1123344555555555543 344556788 6776 99999999999999999999998 56799999999999
Q ss_pred cCCCceecccEEEEecCCCCCcccccccc-----cccccccccCCCCCCcccceeecCCCCCceEEE-cccC---Ccchh
Q 009917 357 DGQTTPLKTDLVILATGFKGDVKLKNIFL-----SQTFQDYLAGSPTEKLPLYREIIHPQIPQLAII-GFSE---SISNL 427 (522)
Q Consensus 357 ~dG~~~~~~D~VI~aTG~~~~~~l~~~~~-----~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~i-G~~~---~~~~~ 427 (522)
+| ++ +++|+||+||||+++..+...+. ...+.+.+. .....|+++..+++||+|++ |... ..+..
T Consensus 374 ~d-~~-~~~D~ii~atG~~~~~~~~~~~~i~g~~G~~l~~~w~----~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~ 447 (542)
T 1w4x_A 374 SE-RE-YELDSLVLATGFDALTGALFKIDIRGVGNVALKEKWA----AGPRTYLGLSTAGFPNLFFIAGPGSPSALSNML 447 (542)
T ss_dssp SS-CE-EECSEEEECCCCCCTTHHHHTSEEECGGGCBHHHHTT----TSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHH
T ss_pred CC-eE-EecCEEEEcCCccccccCcCceeeECCCCCCHHHhhc----CchheecccccCCCCceEEEcCCCCCcccccHH
Confidence 99 77 99999999999998644332211 011222232 12358999999999999998 7553 23445
Q ss_pred hhHHHHHHHHHHHHcCCC--CCCCHHHHHHHHHHHHHHHHHhcCCCCCCccceeeceecHH
Q 009917 428 YTSEMRCRWLAELLDGAV--KLPSIKEMEEDMRKWDEYMKRYSGKYYRRSCIGALHIWYND 486 (522)
Q Consensus 428 ~~~e~qa~~ia~~l~g~~--~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d 486 (522)
..+|.|++|++++|.... ...+.+.+.+..++|.+.+.+.... ..+..|.+||++
T Consensus 448 ~~~e~q~~~ia~~i~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~swy~~ 504 (542)
T 1w4x_A 448 VSIEQHVEWVTDHIAYMFKNGLTRSEAVLEKEDEWVEHVNEIADE----TLYPMTASWYTG 504 (542)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHHHHHHHHHHTT----SSGGGCGGGSSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeEEEECHHHHHHHHHHHHHHHhC----CCcCCCCcCccC
Confidence 789999999999885322 2334444445555676666554421 122357899985
No 6
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=6.1e-47 Score=391.36 Aligned_cols=356 Identities=26% Similarity=0.370 Sum_probs=274.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC--ceEEEecCCCcccccccc----------------------------------c
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIKT----------------------------------V 46 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~~~Gg~w~~~----------------------------------~ 46 (522)
.++|+|||||++||++|..|++.|. +|+|||+++.+||.|.+. |
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 5799999999999999999999999 999999999999999872 1
Q ss_pred cceeecCCccceeecCCCCCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCC
Q 009917 47 ETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQ 126 (522)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~ 126 (522)
..+..+.+...+.|+++|++.. ...|+++.++.+|+++++++++. .++++++|++++...
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~--~i~~~t~V~~v~~~~----------------- 145 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQ-TLQFPHRHTIQEYQRIYAQPLLP--FIKLATDVLDIEKKD----------------- 145 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTT-CCSSCBHHHHHHHHHHHHGGGGG--GEECSEEEEEEEEET-----------------
T ss_pred hhhccCCCHHHhccCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhhC--eEEeCCEEEEEEeCC-----------------
Confidence 2233445556677888888765 57889999999999999999865 899999999998764
Q ss_pred CCCCCCcEEEEEecCCCCc-eeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcc----CceEEeeccCCCCchHhhhhcc
Q 009917 127 PFGSRGKWTVAVEDAKNHS-TEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAF----HGKVIHSMDYSDMDYEAAANLV 201 (522)
Q Consensus 127 ~~~~~~~~~v~~~~~~~g~-~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f----~g~~~hs~~~~~~~~~~~~~~~ 201 (522)
+.|.|++.+..+|+ ..++.||+||+|||++ +.|++|.+| |.+.| .|.++|+.+|++. ..+
T Consensus 146 -----~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~-s~p~~p~i~---G~~~~~~~~~g~v~~~~~~~~~------~~~ 210 (447)
T 2gv8_A 146 -----GSWVVTYKGTKAGSPISKDIFDAVSICNGHY-EVPYIPNIK---GLDEYAKAVPGSVLHSSLFREP------ELF 210 (447)
T ss_dssp -----TEEEEEEEESSTTCCEEEEEESEEEECCCSS-SSBCBCCCB---THHHHHHHSTTSEEEGGGCCCG------GGG
T ss_pred -----CeEEEEEeecCCCCeeEEEEeCEEEECCCCC-CCCCCCCCC---ChhhhhccCCccEEEecccCCh------hhc
Confidence 46999988733343 4579999999999998 589999998 87754 6789999999873 457
Q ss_pred CCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhh
Q 009917 202 KGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATM 281 (522)
Q Consensus 202 ~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 281 (522)
++|+|+|||+|.||+|+|.+|+..+. +.|+++.|++.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~--~~V~l~~r~~~~---------------------------------------- 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAK--HPIYQSLLGGGD---------------------------------------- 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSC--SSEEEECTTCCS----------------------------------------
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhC--CcEEEEeCCCCc----------------------------------------
Confidence 89999999999999999999998753 239999987753
Q ss_pred hhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecCceeE--ecCcEEEcCC
Q 009917 282 LSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQDFSF--CEDGIVVDGQ 359 (522)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~i~~~--~~~gv~~~dG 359 (522)
+...+|.+ ...|.++ ++++|+|+||
T Consensus 249 ----------------------------------------------------l~~~~i~~-~~~v~~~~~~~~~v~~~dG 275 (447)
T 2gv8_A 249 ----------------------------------------------------IQNESLQQ-VPEITKFDPTTREIYLKGG 275 (447)
T ss_dssp ----------------------------------------------------CBCSSEEE-ECCEEEEETTTTEEEETTT
T ss_pred ----------------------------------------------------CCCCCeEE-ecCeEEEecCCCEEEECCC
Confidence 01123332 2335666 3457999999
Q ss_pred CceecccEEEEecCCCCCccc-----ccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCCcchhhhHHHHH
Q 009917 360 TTPLKTDLVILATGFKGDVKL-----KNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSESISNLYTSEMRC 434 (522)
Q Consensus 360 ~~~~~~D~VI~aTG~~~~~~l-----~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~~~~~~e~qa 434 (522)
++.+++|.||+||||+++.++ ++.. ...+..+.....++|++++.++.|+|||+|.+.....++.++.||
T Consensus 276 ~~~~~~D~vi~atG~~~~~~~l~~~~l~~~-----~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~~~~~a~~qa 350 (447)
T 2gv8_A 276 KVLSNIDRVIYCTGYLYSVPFPSLAKLKSP-----ETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPFPTSQAQA 350 (447)
T ss_dssp EEECCCSEEEECCCBCCCCCCHHHHSCCST-----TTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSSCHHHHHHHHH
T ss_pred CEeccCCEEEECCCCCcCCCCCcccccccc-----cCceecCCCcccccccccccCCCCcEEEEeccccccCchHHHHHH
Confidence 864699999999999999876 4321 111221222335689999999999999999887766788999999
Q ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccce-eeceecHHHHHHHcCCCC
Q 009917 435 RWLAELLDGAVKLPSIKEMEEDMRKWDEYMKRYSGKYYRRSCIG-ALHIWYNDQLCKDMGWNP 496 (522)
Q Consensus 435 ~~ia~~l~g~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~d~l~~~~g~~~ 496 (522)
+|+|++|.|+.+||+.++|.+++.+..+.. +..++.+ |.+. .....|+|+|++.+|..+
T Consensus 351 ~~~a~~~~g~~~lp~~~~m~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~y~~~l~~~~~~~~ 410 (447)
T 2gv8_A 351 AFLARVWSGRLKLPSKEEQLKWQDELMFSL-SGANNMY--HSLDYPKDATYINKLHDWCKQAT 410 (447)
T ss_dssp HHHHHHHTTSSCCCCHHHHHHHHHHHHHHH-TTCGGGT--TBCTTTHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHHh-cCCCcce--eecCCccHHHHHHHHHHHhCccc
Confidence 999999999999999999998766543321 1111112 3332 345679999999987653
No 7
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=5.8e-39 Score=321.67 Aligned_cols=345 Identities=21% Similarity=0.285 Sum_probs=254.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
|++++|+|||||++|+++|..|++.|++|+|||+++.+||.|...|+.+.+..+...+.++.++.+.. ...|++..++.
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPAS-QGPYPARAEVL 79 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCC-SSSSCBHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCC-ccCCCCHHHHH
Confidence 77789999999999999999999999999999999999999999999999999999999998888755 67888999999
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEE-EEEecCCCCceeEEEeCEEEEeec
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT-VAVEDAKNHSTEVHQVDFVILCVG 159 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~g~~~~~~~d~lvvAtG 159 (522)
+|+.++++++++ .++++++|++++..+ +.|. |++.++ ++.||+||+|||
T Consensus 80 ~~l~~~~~~~~~--~~~~~~~v~~i~~~~----------------------~~~~~v~~~~g------~~~~d~vV~AtG 129 (357)
T 4a9w_A 80 AYLAQYEQKYAL--PVLRPIRVQRVSHFG----------------------ERLRVVARDGR------QWLARAVISATG 129 (357)
T ss_dssp HHHHHHHHHTTC--CEECSCCEEEEEEET----------------------TEEEEEETTSC------EEEEEEEEECCC
T ss_pred HHHHHHHHHcCC--EEEcCCEEEEEEECC----------------------CcEEEEEeCCC------EEEeCEEEECCC
Confidence 999999999999 799999999999865 4577 765442 789999999999
Q ss_pred ccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 160 RFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 160 ~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
.. +.|.+|.+| |.+.|.+..+|+..+... ..+.+|+|+|||+|.+|+|+|.+|++.+ +|+++.|++
T Consensus 130 ~~-~~~~~~~~~---g~~~~~~~~~~~~~~~~~------~~~~~~~v~VvG~G~~g~e~a~~l~~~~----~v~~v~~~~ 195 (357)
T 4a9w_A 130 TW-GEAYTPEYQ---GLESFAGIQLHSAHYSTP------APFAGMRVAIIGGGNSGAQILAEVSTVA----ETTWITQHE 195 (357)
T ss_dssp SG-GGBCCCCCT---TGGGCCSEEEEGGGCCCS------GGGTTSEEEEECCSHHHHHHHHHHTTTS----EEEEECSSC
T ss_pred CC-CCCCCCCCC---CccccCCcEEEeccCCCh------hhcCCCEEEEECCCcCHHHHHHHHHhhC----CEEEEECCC
Confidence 87 478889888 988999999999998873 4578999999999999999999999874 399999986
Q ss_pred ceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccccc
Q 009917 240 HWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELS 319 (522)
Q Consensus 240 ~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 319 (522)
.+++|... .+..+......++.+ . ....+.+... .
T Consensus 196 ~~~~~~~~-~~~~~~~~~~~~~~~--------------------------------~-------~~~~~~~~~~-----~ 230 (357)
T 4a9w_A 196 PAFLADDV-DGRVLFERATERWKA--------------------------------Q-------QEGREPDLPP-----G 230 (357)
T ss_dssp CCBCCTTC-CTHHHHTC---------------------------------------------------------------
T ss_pred Ceecchhh-cCccHHHHHHHHHhc--------------------------------c-------ccccCCCccc-----c
Confidence 66766642 111100000000000 0 0000000000 0
Q ss_pred ccceeccCCcccccccCCcEEEeecCceeEecCcEEEcCCCceecccEEEEecCCCCCcccccccccccccccccCCCCC
Q 009917 320 SCLTITVPEKFYDKVEEGSIILKKSQDFSFCEDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTE 399 (522)
Q Consensus 320 ~~~~~~~~~~~~~~l~~g~v~v~~~~i~~~~~~gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~~~~ 399 (522)
......+.+.+.+.++.+.+.. ...+.+++.++|+++||++ +++|.||+|||++++.++++... ...+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~g~i~~-~~~v~~~~~~~v~~~~g~~-i~~D~vi~a~G~~p~~~~l~~~g--------l~~~~G 300 (357)
T 4a9w_A 231 GFGDIVMVPPVLDARARGVLAA-VPPPARFSPTGMQWADGTE-RAFDAVIWCTGFRPALSHLKGLD--------LVTPQG 300 (357)
T ss_dssp ---CBCCCHHHHHHHHTTCCCE-ECCCSEEETTEEECTTSCE-EECSEEEECCCBCCCCGGGTTTT--------CBCTTS
T ss_pred cccCcccChhHHHHHhcCceEE-ecCcceEeCCeeEECCCCE-ecCCEEEECCCcCCCCcccCccc--------ccCCCC
Confidence 1111223334445556666433 3457889999999999998 99999999999999976543221 112334
Q ss_pred Cccccee-ecCCCCCceEEEc--ccCC--cchhhhHHHHHHHHHHHHcCCC
Q 009917 400 KLPLYRE-IIHPQIPQLAIIG--FSES--ISNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 400 ~~~ly~~-~~~~~~pnl~~iG--~~~~--~~~~~~~e~qa~~ia~~l~g~~ 445 (522)
.+..... ++.++.||+|++| .... ...+..+..|++.+|..+...+
T Consensus 301 ~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l 351 (357)
T 4a9w_A 301 QVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYC 351 (357)
T ss_dssp CBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHT
T ss_pred CccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHH
Confidence 4444444 4678899999999 4432 2345567788888877665444
No 8
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=100.00 E-value=3e-35 Score=306.97 Aligned_cols=210 Identities=17% Similarity=0.208 Sum_probs=162.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcC--------------CceEEEecCCCccccccc--cccceeecCCc-----------c
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKG--------------FHPIVFEARSDIGGAWIK--TVETTMLQTPK-----------Q 56 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g--------------~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~-----------~ 56 (522)
+||+||||||+||++|..|.+.| ...+.+|+.+.++ |+. .+|+.++++|. .
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s 117 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDPRS 117 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCTTC
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCCCC
Confidence 68999999999999999998753 3467788887776 776 68999998752 2
Q ss_pred ceeecC--------CCCCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCC
Q 009917 57 LYQFSD--------YPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPF 128 (522)
Q Consensus 57 ~~~~~~--------~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~ 128 (522)
.|+|.. ++++.+ ...||++.|+.+|+++++++++. +++|+++|++|++...+.. .
T Consensus 118 ~~sf~~yl~~~~rl~~f~~~-~~~~p~r~E~~~Yl~~~A~~~~~--~vrf~~~V~~v~~~~~~~~--------------~ 180 (501)
T 4b63_A 118 SFTFLNYLHQKGRLIHFTNL-STFLPARLEFEDYMRWCAQQFSD--VVAYGEEVVEVIPGKSDPS--------------S 180 (501)
T ss_dssp TTSHHHHHHHHTCHHHHHTT-CCSCCBHHHHHHHHHHHHHTTGG--GEEESEEEEEEEEECSSTT--------------S
T ss_pred ccchHHHHHHhCCccCCccc-cCCCCCHHHHHHHHHHHHHHcCC--ceEcceEEEeecccccccc--------------c
Confidence 222221 122222 57799999999999999999876 8999999999998751110 0
Q ss_pred CCCCcEEEEEecCCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEE
Q 009917 129 GSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTV 208 (522)
Q Consensus 129 ~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvV 208 (522)
...+.|+|++.++.+|+.+++.+++||+||| ..|++|. ...|.|+++||++|.+.........++||||+|
T Consensus 181 ~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG---~~P~iP~------~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~V 251 (501)
T 4b63_A 181 SVVDFFTVRSRNVETGEISARRTRKVVIAIG---GTAKMPS------GLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAV 251 (501)
T ss_dssp SCBCEEEEEEEETTTCCEEEEEEEEEEECCC---CEECCCT------TSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEE
T ss_pred cccceEEEEEecCCCceEEEEEeCEEEECcC---CCCCCCC------CCCCCcceeeccccccchhhccccccCCcEEEE
Confidence 0134699999998888889999999999999 4577774 445788999999997533222234589999999
Q ss_pred EcCCCCHHHHHHHHhhhcCCCCceEEEEccccee
Q 009917 209 VGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (522)
Q Consensus 209 IG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~ 242 (522)
||+|+||+|++.+|++.... .+|++++|++.|+
T Consensus 252 VG~G~SA~ei~~~L~~~~~~-~~v~~~~R~~~~~ 284 (501)
T 4b63_A 252 LGSGQSAAEIFHDLQKRYPN-SRTTLIMRDSAMR 284 (501)
T ss_dssp ECCSHHHHHHHHHHHHHSTT-CEEEEECSSSSCC
T ss_pred ECCcHHHHHHHHHHHhcCCC-ceEEEEeCCCccc
Confidence 99999999999999986432 5699999999754
No 9
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=5.5e-34 Score=287.12 Aligned_cols=324 Identities=22% Similarity=0.295 Sum_probs=217.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCC-ceEEEecCCCccccccccccceeecCCcc---ceeecCCCCCC--C-----C
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSDIGGAWIKTVETTMLQTPKQ---LYQFSDYPWPD--S-----V 69 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~---~~~~~~~~~~~--~-----~ 69 (522)
|.+++|+|||||++|+++|..|++.|+ +|+|||+++ +||.|........+..+.. .+.+.++.... . .
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 80 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTF 80 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHH
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccc
Confidence 666899999999999999999999999 999999988 9999976332223323221 11111111110 0 0
Q ss_pred CCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEE
Q 009917 70 TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVH 149 (522)
Q Consensus 70 ~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~ 149 (522)
...++++.++.+|+.++++++++ .++++++|++++..+ +.|.|++.++ ++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~g------~~ 130 (369)
T 3d1c_A 81 NEEHISGETYAEYLQVVANHYEL--NIFENTVVTNISADD----------------------AYYTIATTTE------TY 130 (369)
T ss_dssp CCSSCBHHHHHHHHHHHHHHTTC--EEECSCCEEEEEECS----------------------SSEEEEESSC------CE
T ss_pred cccCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEECC----------------------CeEEEEeCCC------EE
Confidence 13466778899999999999998 789999999999864 3588877543 48
Q ss_pred EeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCC
Q 009917 150 QVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLE 229 (522)
Q Consensus 150 ~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~ 229 (522)
.||+||+|||..+ . |.+| + +.++|+..+... ..+.+|+|+|||+|.+|+|+|..|+..+.
T Consensus 131 ~~d~vVlAtG~~~-~---p~ip---~-----~~~~~~~~~~~~------~~~~~~~vvVvG~G~~g~e~a~~l~~~g~-- 190 (369)
T 3d1c_A 131 HADYIFVATGDYN-F---PKKP---F-----KYGIHYSEIEDF------DNFNKGQYVVIGGNESGFDAAYQLAKNGS-- 190 (369)
T ss_dssp EEEEEEECCCSTT-S---BCCC---S-----SSCEEGGGCSCG------GGSCSSEEEEECCSHHHHHHHHHHHHTTC--
T ss_pred EeCEEEECCCCCC-c---cCCC---C-----CceechhhcCCh------hhcCCCEEEEECCCcCHHHHHHHHHhcCC--
Confidence 9999999999762 4 4445 4 357888887763 34678999999999999999999998764
Q ss_pred CceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCC
Q 009917 230 NPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMV 309 (522)
Q Consensus 230 ~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 309 (522)
+|+++.|++.+..|..... ..+... ..
T Consensus 191 -~V~lv~~~~~~~~~~~d~~-~~~~~~--------------------------------~~------------------- 217 (369)
T 3d1c_A 191 -DIALYTSTTGLNDPDADPS-VRLSPY--------------------------------TR------------------- 217 (369)
T ss_dssp -EEEEECC----------CT-TSCCHH--------------------------------HH-------------------
T ss_pred -eEEEEecCCCCCCCCCCCC-ccCCHH--------------------------------HH-------------------
Confidence 5999999887543322100 000000 00
Q ss_pred CCCcccccccccceeccCCcccccccCC-cEEEeecC-ceeE--ecCc--EEEcCCCceec-ccEEEEecCCCCCccccc
Q 009917 310 PKHSFLQELSSCLTITVPEKFYDKVEEG-SIILKKSQ-DFSF--CEDG--IVVDGQTTPLK-TDLVILATGFKGDVKLKN 382 (522)
Q Consensus 310 p~~~~~~~~~~~~~~~~~~~~~~~l~~g-~v~v~~~~-i~~~--~~~g--v~~~dG~~~~~-~D~VI~aTG~~~~~~l~~ 382 (522)
+.+.+.+++. +|+++.+. +.++ ++++ |++.||++ +. +|.||+|||++++.+++.
T Consensus 218 ------------------~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~-~~~~d~vi~a~G~~~~~~~~~ 278 (369)
T 3d1c_A 218 ------------------QRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQS-VHTPHEPILATGFDATKNPIV 278 (369)
T ss_dssp ------------------HHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCC-EEESSCCEECCCBCGGGSHHH
T ss_pred ------------------HHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeE-eccCCceEEeeccCCccchhh
Confidence 0111223344 37777664 7777 3343 67889987 64 699999999999874322
Q ss_pred ccccccccccccCCCCCCcccceeecCCCCCceEEEcccCCc-----chhhhHHHHHHHHHHHHcCCCCCCCHHHHHH
Q 009917 383 IFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSESI-----SNLYTSEMRCRWLAELLDGAVKLPSIKEMEE 455 (522)
Q Consensus 383 ~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-----~~~~~~e~qa~~ia~~l~g~~~lp~~~~~~~ 455 (522)
. . ......+...+....+.++.||||++|..... ..+..++.||+++|+.|.++.++|+.++|.+
T Consensus 279 ~---~-----~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~~~p~~~~~~~ 348 (369)
T 3d1c_A 279 Q---Q-----LFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIE 348 (369)
T ss_dssp H---H-----HSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHTTCCCCHHHHH
T ss_pred h---h-----hccCCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcccCCCCcchHHH
Confidence 1 0 11122333445555567889999999965431 1234678999999999999999998765543
No 10
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=3.7e-32 Score=269.52 Aligned_cols=289 Identities=15% Similarity=0.218 Sum_probs=208.7
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||||++||++|..|++.|++|+|||+++.+||.|...||...+.. +..+ ...+..++.+|+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~------~~~~--------~~~~~~~~~~~~ 73 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYD------VAGF--------PKIRAQELINNL 73 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECC------STTC--------SSEEHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEec------cCCC--------CCCCHHHHHHHH
Confidence 68999999999999999999999999999999999999987777655321 1111 112468899999
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccCC
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~ 163 (522)
.++++++++ .++++++|++++... ++.|.|++.++ ++.||+||+|||..+.
T Consensus 74 ~~~~~~~~~--~~~~~~~v~~i~~~~---------------------~~~~~v~~~~g------~~~~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 74 KEQMAKFDQ--TICLEQAVESVEKQA---------------------DGVFKLVTNEE------THYSKTVIITAGNGAF 124 (332)
T ss_dssp HHHHTTSCC--EEECSCCEEEEEECT---------------------TSCEEEEESSE------EEEEEEEEECCTTSCC
T ss_pred HHHHHHhCC--cEEccCEEEEEEECC---------------------CCcEEEEECCC------EEEeCEEEECCCCCcC
Confidence 999999987 899999999999865 24699988765 3999999999997422
Q ss_pred CCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccceee
Q 009917 164 VPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNI 243 (522)
Q Consensus 164 ~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~~ 243 (522)
.|+.|.+| |.+.|.+..+|+ .+.+. ..+++++|+|||+|.+|+|+|..|++.+. +|+++.|.+. +.
T Consensus 125 ~p~~~~~~---g~~~~~g~~~~~-~~~~~------~~~~~~~v~vvG~g~~~~e~a~~l~~~~~---~v~~~~~~~~-~~ 190 (332)
T 3lzw_A 125 KPRKLELE---NAEQYEGKNLHY-FVDDL------QKFAGRRVAILGGGDSAVDWALMLEPIAK---EVSIIHRRDK-FR 190 (332)
T ss_dssp EECCCCCT---TGGGGBTTTEES-SCSCG------GGGBTCEEEEECSSHHHHHHHHHHTTTBS---EEEEECSSSS-CS
T ss_pred CCCCCCCC---ChhhccCceEEE-ecCCH------HHcCCCEEEEECCCHhHHHHHHHHHhhCC---eEEEEEecCc-CC
Confidence 68888888 888888888887 56552 45679999999999999999999998764 4999998876 21
Q ss_pred cCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccce
Q 009917 244 PDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLT 323 (522)
Q Consensus 244 p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 323 (522)
+.. .
T Consensus 191 ~~~--------~-------------------------------------------------------------------- 194 (332)
T 3lzw_A 191 AHE--------H-------------------------------------------------------------------- 194 (332)
T ss_dssp SCH--------H--------------------------------------------------------------------
T ss_pred ccH--------H--------------------------------------------------------------------
Confidence 110 0
Q ss_pred eccCCcccccccCCcEEEeecC-ceeEecCc----EEEcC-----CCceecccEEEEecCCCCCcccccccccccccccc
Q 009917 324 ITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVDG-----QTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYL 393 (522)
Q Consensus 324 ~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g----v~~~d-----G~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~ 393 (522)
..+.+++.+|+++.+. +.++..++ |++++ +++ +++|.||+|||++++.++++.....
T Consensus 195 ------~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~p~~~~~~~~~~~------ 261 (332)
T 3lzw_A 195 ------SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEI-LEIDDLIVNYGFVSSLGPIKNWGLD------ 261 (332)
T ss_dssp ------HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEE-EECSEEEECCCEECCCGGGGGSSCC------
T ss_pred ------HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEE-EECCEEEEeeccCCCchHHhhcCcc------
Confidence 0011223345555543 56665543 77766 345 8999999999999987654432211
Q ss_pred cCCCCCCcccceeecCCCCCceEEEcccC----CcchhhhHHHHHHHHHHHH
Q 009917 394 AGSPTEKLPLYREIIHPQIPQLAIIGFSE----SISNLYTSEMRCRWLAELL 441 (522)
Q Consensus 394 ~~~~~~~~~ly~~~~~~~~pnl~~iG~~~----~~~~~~~~e~qa~~ia~~l 441 (522)
.+.+.+.... .+.++.||||++|.+. .+.....+..|++.+|..+
T Consensus 262 --~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i 310 (332)
T 3lzw_A 262 --IEKNSIVVKS-TMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNA 310 (332)
T ss_dssp --EETTEEECCT-TSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHH
T ss_pred --ccCCeEEeCC-CCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHH
Confidence 1112222222 2345789999999664 3334566777777777654
No 11
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.98 E-value=5.8e-32 Score=268.67 Aligned_cols=295 Identities=19% Similarity=0.212 Sum_probs=203.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
+++|+|||||++|+++|..|++.|++|+|||+++.+||.|...+|...+ +.+..+ ......++.+|
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~------~~~~~~--------~~~~~~~~~~~ 70 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYI------YDVAGF--------PKVYAKDLVKG 70 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEE------CCSTTC--------SSEEHHHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCcee------eccCCC--------CCCCHHHHHHH
Confidence 4799999999999999999999999999999999999999876554332 111111 11245788899
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+.+.++++++ .++++++|..++... +.|.|++.++ .++.||+||+|||..+
T Consensus 71 l~~~~~~~~~--~~~~~~~v~~i~~~~----------------------~~~~v~~~~g-----~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 71 LVEQVAPFNP--VYSLGERAETLEREG----------------------DLFKVTTSQG-----NAYTAKAVIIAAGVGA 121 (335)
T ss_dssp HHHHHGGGCC--EEEESCCEEEEEEET----------------------TEEEEEETTS-----CEEEEEEEEECCTTSE
T ss_pred HHHHHHHcCC--EEEeCCEEEEEEECC----------------------CEEEEEECCC-----CEEEeCEEEECCCCCC
Confidence 9999999887 788999999998864 3588877654 4789999999999752
Q ss_pred CCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccccee
Q 009917 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (522)
Q Consensus 163 ~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~ 242 (522)
..|+.|++| |.+.|.+..+|.. +.+ ...+.+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+
T Consensus 122 ~~p~~~~i~---g~~~~~~~~~~~~-~~~------~~~~~~~~v~viG~G~~g~e~a~~l~~~g~---~V~~v~~~~~~- 187 (335)
T 2zbw_A 122 FEPRRIGAP---GEREFEGRGVYYA-VKS------KAEFQGKRVLIVGGGDSAVDWALNLLDTAR---RITLIHRRPQF- 187 (335)
T ss_dssp EEECCCCCT---TTTTTBTTTEESS-CSC------GGGGTTCEEEEECSSHHHHHHHHHTTTTSS---EEEEECSSSSC-
T ss_pred CCCCCCCCC---ChhhccCcEEEEe-cCc------hhhcCCCEEEEECCCHHHHHHHHHHHhhCC---EEEEEEcCCcc-
Confidence 257777787 8777766444432 333 234679999999999999999999998754 59999998762
Q ss_pred ecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccc
Q 009917 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (522)
Q Consensus 243 ~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 322 (522)
.+.. . .. ..
T Consensus 188 ~~~~--------~-~~--------------------------------~~------------------------------ 196 (335)
T 2zbw_A 188 RAHE--------A-SV--------------------------------KE------------------------------ 196 (335)
T ss_dssp CSCH--------H-HH--------------------------------HH------------------------------
T ss_pred CccH--------H-HH--------------------------------HH------------------------------
Confidence 2210 0 00 00
Q ss_pred eeccCCcccccccCCcEEEeecC-ceeEecC----cEEEc---CC--CceecccEEEEecCCCCCccccccccccccccc
Q 009917 323 TITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVD---GQ--TTPLKTDLVILATGFKGDVKLKNIFLSQTFQDY 392 (522)
Q Consensus 323 ~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----gv~~~---dG--~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~ 392 (522)
+.+.+++.+|+++.+. +.++.++ +|.++ +| ++ +++|.||+|||++++.++++.+..+
T Consensus 197 -------l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~~~~l~~~~~~----- 263 (335)
T 2zbw_A 197 -------LMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELA-LEVDAVLILAGYITKLGPLANWGLA----- 263 (335)
T ss_dssp -------HHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEE-EECSEEEECCCEEEECGGGGGSCCC-----
T ss_pred -------HHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEE-EecCEEEEeecCCCCchHhhhccee-----
Confidence 1112334456666553 6666554 47776 77 45 8999999999999987554322111
Q ss_pred ccCCCCCCcccceeecCCCCCceEEEcccCC----cchhhhHHHHHHHHHHHHc
Q 009917 393 LAGSPTEKLPLYREIIHPQIPQLAIIGFSES----ISNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 393 ~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~----~~~~~~~e~qa~~ia~~l~ 442 (522)
...+.+.+.. .+.++.||+|++|.+.. ......+..|++.+|..+.
T Consensus 264 ---~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (335)
T 2zbw_A 264 ---LEKNKIKVDT-TMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAA 313 (335)
T ss_dssp ---EETTEEECCT-TCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ---ccCCeeeeCC-CCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHH
Confidence 0112222222 23468999999996542 2234566777777776553
No 12
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.97 E-value=3.5e-31 Score=265.74 Aligned_cols=298 Identities=15% Similarity=0.169 Sum_probs=206.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
..+||+|||||++|+++|..|++.|++|+|||+++.+||.|...+|...+ +.+..+ ......++.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~------~~~~~~--------~~~~~~~~~~ 78 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHI------YDVAGF--------PEVPAIDLVE 78 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEE------CCSTTC--------SSEEHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCccc------ccCCCC--------CCCCHHHHHH
Confidence 34799999999999999999999999999999999999999765554321 111111 1124578889
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
++.+.++++++ .++++++|+.++... ++.|.|++.++ .++.||+||+|||..
T Consensus 79 ~l~~~~~~~~~--~~~~~~~v~~i~~~~---------------------~~~~~v~~~~g-----~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 79 SLWAQAERYNP--DVVLNETVTKYTKLD---------------------DGTFETRTNTG-----NVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHTTCC--EEECSCCEEEEEECT---------------------TSCEEEEETTS-----CEEEEEEEEECCTTC
T ss_pred HHHHHHHHhCC--EEEcCCEEEEEEECC---------------------CceEEEEECCC-----cEEEeeEEEEccCCC
Confidence 99999998887 788999999999864 23688887665 579999999999976
Q ss_pred CCCCCCCCCCCCCC-CCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 162 SDVPNIPEFPPKKG-PEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 162 s~~p~~P~~p~~~g-~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
+..|..|.+| | .+.+.+..+|.. +++ ...+.+++|+|||+|.+|+|+|..|++.+. +|+++.|++.
T Consensus 131 ~~~~~~~~i~---g~~~~~~~~~v~~~-~~~------~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~---~V~lv~~~~~ 197 (360)
T 3ab1_A 131 AFEPRKLPQL---GNIDHLTGSSVYYA-VKS------VEDFKGKRVVIVGGGDSALDWTVGLIKNAA---SVTLVHRGHE 197 (360)
T ss_dssp SCCBCCCGGG---CCCTTTBTTTEESS-CSC------GGGGTTCEEEEECSSHHHHHHHHHTTTTSS---EEEEECSSSS
T ss_pred cCCCCCCCCC---CchhhCcCceEEEe-cCC------HHHcCCCcEEEECCCHHHHHHHHHHHhcCC---EEEEEEcCCC
Confidence 4367788788 7 666766544433 333 234689999999999999999999998754 5999999875
Q ss_pred eeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccc
Q 009917 241 WNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSS 320 (522)
Q Consensus 241 ~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 320 (522)
+ .+...
T Consensus 198 ~-~~~~~------------------------------------------------------------------------- 203 (360)
T 3ab1_A 198 F-QGHGK------------------------------------------------------------------------- 203 (360)
T ss_dssp C-SSCSH-------------------------------------------------------------------------
T ss_pred C-CCCHH-------------------------------------------------------------------------
Confidence 2 22100
Q ss_pred cceeccCCcccccccCCcEEEeecC-ceeEecC-----cEEEc--CCC-ceecccEEEEecCCCCCcccccccccccccc
Q 009917 321 CLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVD--GQT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQD 391 (522)
Q Consensus 321 ~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----gv~~~--dG~-~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~ 391 (522)
..+.+.+.+++.+|+++.+. +.++..+ +|.+. +|+ ..+++|.||+|||++++.++++.+..+
T Consensus 204 -----~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~---- 274 (360)
T 3ab1_A 204 -----TAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLE---- 274 (360)
T ss_dssp -----HHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCC----
T ss_pred -----HHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccc----
Confidence 00011122344567777663 6666543 46775 773 238999999999999987654332111
Q ss_pred cccCCCCCCcccceeecCCCCCceEEEcccCC----cchhhhHHHHHHHHHHHHc
Q 009917 392 YLAGSPTEKLPLYREIIHPQIPQLAIIGFSES----ISNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 392 ~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~----~~~~~~~e~qa~~ia~~l~ 442 (522)
...+.+.... .+.++.||||++|.+.. +.....+..|++.+|..+.
T Consensus 275 ----~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 324 (360)
T 3ab1_A 275 ----LYENALVVDS-HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSL 324 (360)
T ss_dssp ----EETTEEECCT-TSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHH
T ss_pred ----cccCeeeecC-CCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHH
Confidence 0112222222 23457899999996643 2235567778777777654
No 13
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.97 E-value=5.2e-31 Score=256.96 Aligned_cols=285 Identities=10% Similarity=0.077 Sum_probs=202.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
|. ++|+|||||++|+++|..|++.|++|+|||+++..+..+... . .++ .....+..++.
T Consensus 1 m~-~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~------------~-----~~~---~~~~~~~~~~~ 59 (297)
T 3fbs_A 1 MK-FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS------------H-----GFL---GQDGKAPGEII 59 (297)
T ss_dssp CC-EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC------------C-----SST---TCTTCCHHHHH
T ss_pred CC-CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh------------c-----CCc---CCCCCCHHHHH
Confidence 54 799999999999999999999999999999976443221110 0 011 12234668899
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
+|+.+.+++++. ...++++|+.+++.. +.|.|++.++ +++.||+||+|||.
T Consensus 60 ~~~~~~~~~~~~--v~~~~~~v~~i~~~~----------------------~~~~v~~~~g-----~~~~~d~vviAtG~ 110 (297)
T 3fbs_A 60 AEARRQIERYPT--IHWVEGRVTDAKGSF----------------------GEFIVEIDGG-----RRETAGRLILAMGV 110 (297)
T ss_dssp HHHHHHHTTCTT--EEEEESCEEEEEEET----------------------TEEEEEETTS-----CEEEEEEEEECCCC
T ss_pred HHHHHHHHhcCC--eEEEEeEEEEEEEcC----------------------CeEEEEECCC-----CEEEcCEEEECCCC
Confidence 999999988742 123467999998865 4588988776 57999999999995
Q ss_pred cCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 161 ~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.|+.|.+| |.+.+.+..+|+..+.+ ....++|+|+|||+|.+|+|+|..|++.+ +|+++.|++.
T Consensus 111 ---~~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~vvG~G~~~~e~a~~l~~~g----~v~~v~~~~~ 174 (297)
T 3fbs_A 111 ---TDELPEIA---GLRERWGSAVFHCPYCH------GYELDQGKIGVIAASPMAIHHALMLPDWG----ETTFFTNGIV 174 (297)
T ss_dssp ---EEECCCCB---TTGGGBTTTEESCHHHH------TGGGTTCEEEEECCSTTHHHHHHHGGGTS----EEEEECTTTC
T ss_pred ---CCCCCCCC---CchhhcCCeeEEcccCc------chhhcCCEEEEEecCccHHHHHHHhhhcC----cEEEEECCCC
Confidence 56778888 88888777777666543 23567999999999999999999999874 4999988764
Q ss_pred eeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccc
Q 009917 241 WNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSS 320 (522)
Q Consensus 241 ~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 320 (522)
...
T Consensus 175 ----~~~------------------------------------------------------------------------- 177 (297)
T 3fbs_A 175 ----EPD------------------------------------------------------------------------- 177 (297)
T ss_dssp ----CCC-------------------------------------------------------------------------
T ss_pred ----CCC-------------------------------------------------------------------------
Confidence 100
Q ss_pred cceeccCCcccccccCCcEEEeecCceeEecC-cEEEcCCCceecccEEEEecCCCCCcccccccccccccccccCCCCC
Q 009917 321 CLTITVPEKFYDKVEEGSIILKKSQDFSFCED-GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTE 399 (522)
Q Consensus 321 ~~~~~~~~~~~~~l~~g~v~v~~~~i~~~~~~-gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~~~~ 399 (522)
+.+.+.+++.+|+++...+.++.++ +|+++||++ +++|.||+|||++++.++++.+..+ +.. .+.+
T Consensus 178 -------~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~-~~~D~vi~a~G~~p~~~~~~~~g~~-~~~----~~~G 244 (297)
T 3fbs_A 178 -------ADQHALLAARGVRVETTRIREIAGHADVVLADGRS-IALAGLFTQPKLRITVDWIEKLGCA-VEE----GPMG 244 (297)
T ss_dssp -------HHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCE-EEESEEEECCEEECCCSCHHHHTCC-EEE----ETTE
T ss_pred -------HHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCE-EEEEEEEEccCcccCchhHHhcCCc-ccc----CCCC
Confidence 0011223344566665557788776 799999988 9999999999999987654432211 000 0111
Q ss_pred -CcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHc
Q 009917 400 -KLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 400 -~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~ 442 (522)
.+.... .+.++.||+|++|.+.. +.....+..|++.+|..+.
T Consensus 245 ~~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 245 STIVTDP-MKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp EEECCCT-TCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHH
T ss_pred ceEEeCC-CCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHH
Confidence 122222 24578999999997665 5556778888888887663
No 14
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.97 E-value=1.7e-30 Score=256.34 Aligned_cols=283 Identities=17% Similarity=0.185 Sum_probs=203.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
+||+|||||++|+++|..|++.|++|+|||++ +||.|... . ..+.+.. .......++.+|+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~--~-------~~~~~~~--------~~~~~~~~~~~~~ 76 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEA--G-------IVDDYLG--------LIEIQASDMIKVF 76 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGC--C-------EECCSTT--------STTEEHHHHHHHH
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeeccc--c-------cccccCC--------CCCCCHHHHHHHH
Confidence 69999999999999999999999999999998 89998861 0 0001111 1113567899999
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccCC
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~ 163 (522)
.++++++++ .+.+ ++|++++... +.|.|++.++ .++.||+||+|||.
T Consensus 77 ~~~~~~~~v--~~~~-~~v~~i~~~~----------------------~~~~v~~~~g-----~~~~~d~lvlAtG~--- 123 (323)
T 3f8d_A 77 NKHIEKYEV--PVLL-DIVEKIENRG----------------------DEFVVKTKRK-----GEFKADSVILGIGV--- 123 (323)
T ss_dssp HHHHHTTTC--CEEE-SCEEEEEEC------------------------CEEEEESSS-----CEEEEEEEEECCCC---
T ss_pred HHHHHHcCC--EEEE-EEEEEEEecC----------------------CEEEEEECCC-----CEEEcCEEEECcCC---
Confidence 999999998 7777 8999998764 4588888775 57999999999995
Q ss_pred CCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccceee
Q 009917 164 VPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNI 243 (522)
Q Consensus 164 ~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~~ 243 (522)
.|+.|.+| |.+.|.+..+|...+.+ .....+++|+|||+|.+|+|+|..|+..+. +|+++.|++. +.
T Consensus 124 ~~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~---~v~~~~~~~~-~~ 190 (323)
T 3f8d_A 124 KRRKLGVP---GEQEFAGRGISYCSVAD------APLFKNRVVAVIGGGDSALEGAEILSSYST---KVYLIHRRDT-FK 190 (323)
T ss_dssp EECCCCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHHHHSS---EEEEECSSSS-CC
T ss_pred CCccCCCC---chhhhcCCceEEeccCC------HhHcCCCEEEEECCCHHHHHHHHHHHHhCC---eEEEEEeCCC-CC
Confidence 47788888 88888777676554432 245789999999999999999999998864 4999998875 22
Q ss_pred cCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccce
Q 009917 244 PDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLT 323 (522)
Q Consensus 244 p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 323 (522)
+..
T Consensus 191 ~~~----------------------------------------------------------------------------- 193 (323)
T 3f8d_A 191 AQP----------------------------------------------------------------------------- 193 (323)
T ss_dssp SCH-----------------------------------------------------------------------------
T ss_pred cCH-----------------------------------------------------------------------------
Confidence 210
Q ss_pred eccCCcccc-cccCCcEEEeecC-ceeEecC----cEEEcC---CC--ceecccEEEEecCCCCCccccccccccccccc
Q 009917 324 ITVPEKFYD-KVEEGSIILKKSQ-DFSFCED----GIVVDG---QT--TPLKTDLVILATGFKGDVKLKNIFLSQTFQDY 392 (522)
Q Consensus 324 ~~~~~~~~~-~l~~g~v~v~~~~-i~~~~~~----gv~~~d---G~--~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~ 392 (522)
.+.+ ..++.+|+++.+. +.++.++ +|++.+ |+ + +++|.||+|||++++.++++.....
T Consensus 194 -----~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~p~~~~~~~~g~~----- 262 (323)
T 3f8d_A 194 -----IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKE-LNVNGVFIEIGFDPPTDFAKSNGIE----- 262 (323)
T ss_dssp -----HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEE-EECSEEEECCCEECCHHHHHHTTCC-----
T ss_pred -----HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEE-EEcCEEEEEECCCCChhHHhhcCee-----
Confidence 0001 1223467777665 7777655 377776 76 5 8999999999999996654332111
Q ss_pred ccCCCCCCcccceeecCCCCCceEEEcccCC----cchhhhHHHHHHHHHHHHc
Q 009917 393 LAGSPTEKLPLYREIIHPQIPQLAIIGFSES----ISNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 393 ~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~----~~~~~~~e~qa~~ia~~l~ 442 (522)
-++.+.+.... .+.++.||||++|.+.. +.....+..|++.+|..+.
T Consensus 263 --~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 263 --TDTNGYIKVDE-WMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp --BCTTSSBCCCT-TCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred --ecCCCcEecCC-CceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHH
Confidence 01222222222 34468999999997655 3346677888887777553
No 15
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.97 E-value=4.5e-30 Score=253.96 Aligned_cols=288 Identities=19% Similarity=0.206 Sum_probs=201.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
+++|+|||||++|+++|..|++.|++|+|||++ .+||.|..... ...++.+ +...+..++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~---------~~~~~~~-------~~~~~~~~~~~~ 70 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE---------VENFPGF-------PEPIAGMELAQR 70 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC---------BCCSTTC-------SSCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc---------cccCCCC-------CCCCCHHHHHHH
Confidence 368999999999999999999999999999998 78998875210 0011111 112356789999
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEc--CCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFE--GLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
+.+.++++++ .+.+ ++|.+++.. + +..|.|.+.++ .++.||+||+|||.
T Consensus 71 l~~~~~~~gv--~~~~-~~v~~i~~~~~~---------------------~~~~~v~~~~g-----~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 71 MHQQAEKFGA--KVEM-DEVQGVQHDATS---------------------HPYPFTVRGYN-----GEYRAKAVILATGA 121 (325)
T ss_dssp HHHHHHHTTC--EEEE-CCEEEEEECTTS---------------------SSCCEEEEESS-----CEEEEEEEEECCCE
T ss_pred HHHHHHHcCC--EEEe-eeEEEEEeccCC---------------------CceEEEEECCC-----CEEEeCEEEECcCC
Confidence 9999999988 6666 689999876 3 12378877765 57999999999995
Q ss_pred cCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 161 ~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.|+.|.+| |.+.|.+..+|+..+.+ .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++.
T Consensus 122 ---~~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~ 186 (325)
T 2q7v_A 122 ---DPRKLGIP---GEDNFWGKGVSTCATCD------GFFYKGKKVVVIGGGDAAVEEGMFLTKFAD---EVTVIHRRDT 186 (325)
T ss_dssp ---EECCCCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHTTTCS---EEEEECSSSS
T ss_pred ---CcCCCCCC---ChhhccCceEEEeccCC------HHHcCCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEeCCCc
Confidence 46777788 87777666667554432 234678999999999999999999998764 5999999875
Q ss_pred eeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccc
Q 009917 241 WNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSS 320 (522)
Q Consensus 241 ~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 320 (522)
+ .+ . . .
T Consensus 187 ~-~~--~------~-~---------------------------------------------------------------- 192 (325)
T 2q7v_A 187 L-RA--N------K-V---------------------------------------------------------------- 192 (325)
T ss_dssp C-CS--C------H-H----------------------------------------------------------------
T ss_pred C-Cc--c------h-H----------------------------------------------------------------
Confidence 2 11 0 0 0
Q ss_pred cceeccCCcccc-cccCCcEEEeecC-ceeEecC----cEEEc---CCC-ceecccEEEEecCCCCCccccccccccccc
Q 009917 321 CLTITVPEKFYD-KVEEGSIILKKSQ-DFSFCED----GIVVD---GQT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQ 390 (522)
Q Consensus 321 ~~~~~~~~~~~~-~l~~g~v~v~~~~-i~~~~~~----gv~~~---dG~-~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~ 390 (522)
+.+ ..++.+|+++.+. +.++..+ +|+++ +|+ ..+++|.||+|||++++.++++.. +.
T Consensus 193 ---------~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~----~~ 259 (325)
T 2q7v_A 193 ---------AQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT----VS 259 (325)
T ss_dssp ---------HHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT----SC
T ss_pred ---------HHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh----cc
Confidence 000 1123456666654 6666554 47775 676 238999999999999997654321 10
Q ss_pred ccccCCCCCCcccceeecCCCCCceEEEcccCC--cchhhhHHHHHHHHHHHHcC
Q 009917 391 DYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES--ISNLYTSEMRCRWLAELLDG 443 (522)
Q Consensus 391 ~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~--~~~~~~~e~qa~~ia~~l~g 443 (522)
. ++.+.+..... +.++.||+|++|.+.. +.....+..|++.+|..+..
T Consensus 260 ---~-~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 260 ---L-RDDGYVDVRDE-IYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp ---B-CTTSCBCCBTT-TBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ---c-CCCccEecCCC-CccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 0 12223333222 4568999999997654 23566788888888876643
No 16
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.97 E-value=2.1e-30 Score=257.56 Aligned_cols=292 Identities=18% Similarity=0.223 Sum_probs=203.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecC----CCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR----SDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~----~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (522)
.++|+|||||++||++|..|++.|++|+|||+. ..+||.|..... ...|+. .+.+....+
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~---------~~~~~~-------~~~~~~~~~ 85 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTE---------IENFPG-------FPDGLTGSE 85 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSE---------ECCSTT-------CTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchh---------hcccCC-------CcccCCHHH
Confidence 379999999999999999999999999999994 478998886221 001111 123446789
Q ss_pred HHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 79 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
+.+|+.++++++++ .+++++ |++++... +.|.+++.... ...++.||+||+||
T Consensus 86 ~~~~~~~~~~~~gv--~i~~~~-v~~i~~~~----------------------~~~~v~~~~~~--~~~~~~~d~vvlAt 138 (338)
T 3itj_A 86 LMDRMREQSTKFGT--EIITET-VSKVDLSS----------------------KPFKLWTEFNE--DAEPVTTDAIILAT 138 (338)
T ss_dssp HHHHHHHHHHHTTC--EEECSC-EEEEECSS----------------------SSEEEEETTCS--SSCCEEEEEEEECC
T ss_pred HHHHHHHHHHHcCC--EEEEeE-EEEEEEcC----------------------CEEEEEEEecC--CCcEEEeCEEEECc
Confidence 99999999999998 788887 99998754 45777774321 12568999999999
Q ss_pred cccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcc
Q 009917 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~ 238 (522)
|. .|+.|.+| |.+.|.+..+|+..+.... .....+++|+|||+|.+|+|+|..|++.+. +|+++.|+
T Consensus 139 G~---~~~~~~~~---g~~~~~~~~~~~~~~~~~~----~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~---~v~~v~~~ 205 (338)
T 3itj_A 139 GA---SAKRMHLP---GEETYWQKGISACAVCDGA----VPIFRNKPLAVIGGGDSACEEAQFLTKYGS---KVFMLVRK 205 (338)
T ss_dssp CE---EECCCCCT---THHHHBTTTEESCHHHHTT----SGGGTTSEEEEECSSHHHHHHHHHHTTTSS---EEEEECSS
T ss_pred CC---CcCCCCCC---CchhccCccEEEchhcccc----hhhcCCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEEcC
Confidence 95 46778888 8777766666655432210 124689999999999999999999998764 59999998
Q ss_pred cceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccc
Q 009917 239 EHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQEL 318 (522)
Q Consensus 239 ~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 318 (522)
+.+ .+..
T Consensus 206 ~~~-~~~~------------------------------------------------------------------------ 212 (338)
T 3itj_A 206 DHL-RAST------------------------------------------------------------------------ 212 (338)
T ss_dssp SSC-CSCH------------------------------------------------------------------------
T ss_pred Ccc-CCCH------------------------------------------------------------------------
Confidence 762 1110
Q ss_pred cccceeccCCcccccc-cCCcEEEeecC-ceeEecCc-----EEEcC-----CCceecccEEEEecCCCCCccccccccc
Q 009917 319 SSCLTITVPEKFYDKV-EEGSIILKKSQ-DFSFCEDG-----IVVDG-----QTTPLKTDLVILATGFKGDVKLKNIFLS 386 (522)
Q Consensus 319 ~~~~~~~~~~~~~~~l-~~g~v~v~~~~-i~~~~~~g-----v~~~d-----G~~~~~~D~VI~aTG~~~~~~l~~~~~~ 386 (522)
.+.+.+ +..+|+++.+. +.++..++ |++++ +++ +++|.||+|||++++..+++. .
T Consensus 213 ----------~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~~~~~~~-~- 279 (338)
T 3itj_A 213 ----------IMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETD-LPVSGLFYAIGHTPATKIVAG-Q- 279 (338)
T ss_dssp ----------HHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEE-EECSEEEECSCEEECCGGGBT-T-
T ss_pred ----------HHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEE-EEeCEEEEEeCCCCChhHhhC-c-
Confidence 001112 22367777654 66776543 77776 345 899999999999998765432 1
Q ss_pred ccccccccCCCCCCcccceeecCCCCCceEEEcccCC--cchhhhHHHHHHHHHHHHc
Q 009917 387 QTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES--ISNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 387 ~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~--~~~~~~~e~qa~~ia~~l~ 442 (522)
+ .-++.+.+.+....+.++.||+|++|.+.. +..+..+..|++.+|..+.
T Consensus 280 --l----~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 331 (338)
T 3itj_A 280 --V----DTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAE 331 (338)
T ss_dssp --B----CBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred --e----EecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHH
Confidence 1 112233333334445678999999997663 3445667778777776553
No 17
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.97 E-value=7.8e-30 Score=250.54 Aligned_cols=289 Identities=15% Similarity=0.172 Sum_probs=199.7
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC-ceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
++|+|||||++|+++|..|++.|+ +|+|||++ .+||.|..... ...++. .+......++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~---------~~~~~~-------~~~~~~~~~~~~~ 64 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE---------IENYPG-------VKEVVSGLDFMQP 64 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC---------BCCSTT-------CCSCBCHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc---------cccCCC-------CcccCCHHHHHHH
Confidence 589999999999999999999999 99999995 68888875210 001111 1123466889999
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+.+.++++++ .+++ ++|++++... +.|.|++.++ .++.||+||+|||.
T Consensus 65 l~~~~~~~~v--~~~~-~~v~~i~~~~----------------------~~~~v~~~~g-----~~~~~~~vv~AtG~-- 112 (311)
T 2q0l_A 65 WQEQCFRFGL--KHEM-TAVQRVSKKD----------------------SHFVILAEDG-----KTFEAKSVIIATGG-- 112 (311)
T ss_dssp HHHHHHTTSC--EEEC-SCEEEEEEET----------------------TEEEEEETTS-----CEEEEEEEEECCCE--
T ss_pred HHHHHHHcCC--EEEE-EEEEEEEEcC----------------------CEEEEEEcCC-----CEEECCEEEECCCC--
Confidence 9999999887 6766 7899998764 3588877654 47999999999995
Q ss_pred CCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccccee
Q 009917 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (522)
Q Consensus 163 ~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~ 242 (522)
.|+.|++| |.+.|.+..+|+..+.+ .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+.
T Consensus 113 -~~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~~ 179 (311)
T 2q0l_A 113 -SPKRTGIK---GESEYWGKGVSTCATCD------GFFYKNKEVAVLGGGDTAVEEAIYLANICK---KVYLIHRRDGFR 179 (311)
T ss_dssp -EECCCCCB---THHHHBTTTEESCHHHH------GGGGTTSEEEEECCSHHHHHHHHHHHTTSS---EEEEECSSSSCC
T ss_pred -CCCCCCCC---ChhhccCCcEEEeecCC------hhhcCCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEeeCCccC
Confidence 46778788 87777666666554432 234678999999999999999999998764 599999887521
Q ss_pred ecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccc
Q 009917 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (522)
Q Consensus 243 ~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 322 (522)
.. ..
T Consensus 180 ---~~-------~~------------------------------------------------------------------ 183 (311)
T 2q0l_A 180 ---CA-------PI------------------------------------------------------------------ 183 (311)
T ss_dssp ---SC-------HH------------------------------------------------------------------
T ss_pred ---CC-------HH------------------------------------------------------------------
Confidence 10 00
Q ss_pred eeccCCcccccc-cCCcEEEeecC-ceeEecC-----cEEEc---CCCc-eecccEEEEecCCCCCccccccccc-cccc
Q 009917 323 TITVPEKFYDKV-EEGSIILKKSQ-DFSFCED-----GIVVD---GQTT-PLKTDLVILATGFKGDVKLKNIFLS-QTFQ 390 (522)
Q Consensus 323 ~~~~~~~~~~~l-~~g~v~v~~~~-i~~~~~~-----gv~~~---dG~~-~~~~D~VI~aTG~~~~~~l~~~~~~-~~l~ 390 (522)
+.+.+ ++.+|+++.+. +.++..+ +|+++ +|+. .+++|.||+|||++|+.++++.... ..+.
T Consensus 184 -------~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~ 256 (311)
T 2q0l_A 184 -------TLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCK 256 (311)
T ss_dssp -------HHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSC
T ss_pred -------HHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeE
Confidence 00111 12456666553 6666543 46776 6761 2899999999999998765442210 0000
Q ss_pred ccccCCCCCCcccceeecCCCCCceEEEcccCC--cchhhhHHHHHHHHHHHHc
Q 009917 391 DYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES--ISNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 391 ~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~--~~~~~~~e~qa~~ia~~l~ 442 (522)
. ++.+.+.... .+.++.||+|++|.+.. +.....+..|++.+|..+.
T Consensus 257 ---~-~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 305 (311)
T 2q0l_A 257 ---C-DEYGSIVVDF-SMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVI 305 (311)
T ss_dssp ---B-CTTSCBCCCT-TCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ---e-ccCCCEEeCC-ccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHH
Confidence 0 1223333322 24468999999997654 3356778888888887664
No 18
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.97 E-value=9.3e-30 Score=250.25 Aligned_cols=293 Identities=19% Similarity=0.217 Sum_probs=204.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEE-EecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIV-FEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i-~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
.+++|+|||||++||++|..|++.|++|+| +|+ +.+||.|..... +..+ |. .+.+.+..++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~------------~~~~--~~--~~~~~~~~~~~ 65 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE------------IENY--PG--VAQVMDGISFM 65 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC------------BCCS--TT--CCSCBCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece------------eccC--CC--CCCCCCHHHHH
Confidence 347999999999999999999999999999 999 778999876211 0011 10 12244678999
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
.|+.++++++++ .++++ +|+++ ++. ..+.|.|++... + ++.||+||+|||.
T Consensus 66 ~~~~~~~~~~~v--~~~~~-~v~~i-~~~--------------------~~~~~~v~~~~~--~---~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 66 APWSEQCMRFGL--KHEMV-GVEQI-LKN--------------------SDGSFTIKLEGG--K---TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHTTTCC--EEECC-CEEEE-EEC--------------------TTSCEEEEETTS--C---EEEEEEEEECCCE
T ss_pred HHHHHHHHHcCc--EEEEE-EEEEE-ecC--------------------CCCcEEEEEecC--C---EEEeCEEEEeeCC
Confidence 999999999998 67777 88888 543 124588655543 2 7899999999995
Q ss_pred cCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 161 ~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.|+.|.+| |.+.|.+..+|+..+.. .....+++|+|||+|.+|+|+|..|+..+. +|+++.|++.
T Consensus 117 ---~~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viG~g~~~~e~a~~l~~~g~---~v~~~~~~~~ 181 (315)
T 3r9u_A 117 ---APKKAGFK---GEDEFFGKGVSTCATCD------GFFYKNKEVAVLGGGDTALEEALYLANICS---KIYLIHRRDE 181 (315)
T ss_dssp ---EECCCCCB---TTTTTBTTTEESCHHHH------GGGGTTSEEEEECCBHHHHHHHHHHHTTSS---EEEEECSSSS
T ss_pred ---CCCCCCCC---ChhhcCCCeEEeeeccc------ccccCcCEEEEECCCHHHHHHHHHHHhhCC---EEEEEEeCCC
Confidence 57888888 88888777788766543 245689999999999999999999998764 5999998876
Q ss_pred eeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccc
Q 009917 241 WNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSS 320 (522)
Q Consensus 241 ~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 320 (522)
+ +... . .
T Consensus 182 ~--~~~~--------~-------------------------------~-------------------------------- 188 (315)
T 3r9u_A 182 F--RAAP--------S-------------------------------T-------------------------------- 188 (315)
T ss_dssp C--BSCH--------H-------------------------------H--------------------------------
T ss_pred C--CCCH--------H-------------------------------H--------------------------------
Confidence 3 1100 0 0
Q ss_pred cceeccCCcccccccCCcEEEeecC-ceeEecCc-----EEEc--CCC--ceecccEEEEecCCCCCccccccccccccc
Q 009917 321 CLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG-----IVVD--GQT--TPLKTDLVILATGFKGDVKLKNIFLSQTFQ 390 (522)
Q Consensus 321 ~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g-----v~~~--dG~--~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~ 390 (522)
+.+.+++.+|+++.+. +.++..++ |++. +|+ + +++|.||+|||++++..+.+.... +.
T Consensus 189 ---------~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~-~~~D~vv~a~G~~p~~~~~~~~~~--~g 256 (315)
T 3r9u_A 189 ---------VEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRD-LNVPGIFTFVGLNVRNEILKQDDS--KF 256 (315)
T ss_dssp ---------HHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEE-ECCSCEEECSCEEECCGGGBCTTS--CB
T ss_pred ---------HHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEE-eecCeEEEEEcCCCCchhhhcccc--cc
Confidence 0011234467777554 66665443 7776 886 5 899999999999998766543000 00
Q ss_pred ccccCCCCCCcccceeecCCCCCceEEEcccC--CcchhhhHHHHHHHHHHHHc
Q 009917 391 DYLAGSPTEKLPLYREIIHPQIPQLAIIGFSE--SISNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 391 ~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~--~~~~~~~~e~qa~~ia~~l~ 442 (522)
.+..++.+.+.... .+.++.||+|++|.+. .+.....+..|++.+|..+.
T Consensus 257 -~l~~~~~g~i~vd~-~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 257 -LCNMEEGGQVSVDL-KMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp -SSCBCTTSCBCCCT-TCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred -eeeecCCCcEEeCC-CcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHH
Confidence 00001222232222 3456899999999764 33456677888888877653
No 19
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.2e-29 Score=251.95 Aligned_cols=286 Identities=18% Similarity=0.266 Sum_probs=197.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||||++|+++|..|++.|++|+|||+. .+||.|..... ...++.+ +......++.+|
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~---------~~~~~~~-------~~~~~~~~~~~~ 76 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD---------VENYPGF-------RNGITGPELMDE 76 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC---------BCCSTTC-------TTCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch---------hhhcCCC-------CCCCCHHHHHHH
Confidence 478999999999999999999999999999975 78888765210 0011111 112345788999
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEE-EEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTV-AVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.++++++++ .+++++ |.+++. . +.|.| .+.++ +++.||+||+|||.
T Consensus 77 l~~~~~~~~v--~~~~~~-v~~i~~-~----------------------~~~~v~~~~~g-----~~~~~d~lviAtG~- 124 (335)
T 2a87_A 77 MREQALRFGA--DLRMED-VESVSL-H----------------------GPLKSVVTADG-----QTHRARAVILAMGA- 124 (335)
T ss_dssp HHHHHHHTTC--EEECCC-EEEEEC-S----------------------SSSEEEEETTS-----CEEEEEEEEECCCE-
T ss_pred HHHHHHHcCC--EEEEee-EEEEEe-C----------------------CcEEEEEeCCC-----CEEEeCEEEECCCC-
Confidence 9999999988 787776 888876 3 34778 66554 57999999999995
Q ss_pred CCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccce
Q 009917 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHW 241 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~ 241 (522)
.|..|.+| |.+.|.+..+|+..+.+ .....+++|+|||+|.+|+|+|..|+..+. +|+++.|++.+
T Consensus 125 --~~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~---~V~l~~~~~~~ 190 (335)
T 2a87_A 125 --AARYLQVP---GEQELLGRGVSSCATCD------GFFFRDQDIAVIGGGDSAMEEATFLTRFAR---SVTLVHRRDEF 190 (335)
T ss_dssp --EECCCCCT---HHHHTBTTTEESCHHHH------GGGGTTCEEEEECSSHHHHHHHHHHTTTCS---EEEEECSSSSC
T ss_pred --CccCCCCC---chHhccCCceEEeeccc------hhhcCCCEEEEECCCHHHHHHHHHHHHhCC---eEEEEEcCCcC
Confidence 46777777 77667666667654332 223678999999999999999999998754 59999988763
Q ss_pred eecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccccccc
Q 009917 242 NIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSC 321 (522)
Q Consensus 242 ~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 321 (522)
. +...
T Consensus 191 ~-~~~~-------------------------------------------------------------------------- 195 (335)
T 2a87_A 191 R-ASKI-------------------------------------------------------------------------- 195 (335)
T ss_dssp S-SCTT--------------------------------------------------------------------------
T ss_pred C-ccHH--------------------------------------------------------------------------
Confidence 1 1100
Q ss_pred ceeccCCccc-ccccCCcEEEeecC-ceeEecCc----EEEc---CCC-ceecccEEEEecCCCCCcccccccccccccc
Q 009917 322 LTITVPEKFY-DKVEEGSIILKKSQ-DFSFCEDG----IVVD---GQT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQD 391 (522)
Q Consensus 322 ~~~~~~~~~~-~~l~~g~v~v~~~~-i~~~~~~g----v~~~---dG~-~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~ 391 (522)
+. +.+++.+|+++.+. +.++..++ |+++ +|+ ..+++|.||+|||++++..+++. .+.
T Consensus 196 --------~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~----~l~- 262 (335)
T 2a87_A 196 --------MLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVRE----AID- 262 (335)
T ss_dssp --------HHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTBT----TBC-
T ss_pred --------HHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhhc----ccc-
Confidence 00 11234456666554 66665543 7775 453 23899999999999998765431 011
Q ss_pred cccCCCCCCcccceeecCCCCCceEEEcccCCc--chhhhHHHHHHHHHHHHc
Q 009917 392 YLAGSPTEKLPLYREIIHPQIPQLAIIGFSESI--SNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 392 ~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~ia~~l~ 442 (522)
. ++.+.+......+.++.||+|++|.+... .....+..|++.+|..+.
T Consensus 263 --~-~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 263 --V-DPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp --B-CTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred --c-CCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHH
Confidence 1 22333444444556789999999976543 235567778887776553
No 20
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.96 E-value=3.8e-29 Score=245.49 Aligned_cols=287 Identities=14% Similarity=0.182 Sum_probs=197.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
+||+|||||++|+++|..|++.|++|+|||+ .+||.|..... +..+ + ...+....++.+|+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~~------------~~~~--~---~~~~~~~~~~~~~~ 62 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTVD------------IENY--I---SVPKTEGQKLAGAL 62 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCCE------------ECCB--T---TBSSEEHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceeccccc------------cccc--c---CcCCCCHHHHHHHH
Confidence 6899999999999999999999999999986 47898875211 0000 0 11234567889999
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccCC
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~ 163 (522)
.++++++++ .++++++|+.+++... +.+.|.|++.++ +++.||+||+|||..
T Consensus 63 ~~~~~~~~v--~~~~~~~v~~i~~~~~-------------------~~~~~~v~~~~g-----~~~~~~~lv~AtG~~-- 114 (310)
T 1fl2_A 63 KVHVDEYDV--DVIDSQSASKLIPAAV-------------------EGGLHQIETASG-----AVLKARSIIVATGAK-- 114 (310)
T ss_dssp HHHHHTSCE--EEECSCCEEEEECCSS-------------------TTCCEEEEETTS-----CEEEEEEEEECCCEE--
T ss_pred HHHHHHcCC--eEEccCEEEEEEeccc-------------------CCceEEEEECCC-----CEEEeCEEEECcCCC--
Confidence 999999988 7888999999987530 123588988765 478999999999964
Q ss_pred CCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccceee
Q 009917 164 VPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNI 243 (522)
Q Consensus 164 ~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~~ 243 (522)
|+.|.+| |.+.|.+..+|+..+.. ...+.+|+|+|||+|.+|+|+|..|+..+. +|+++.|++.+
T Consensus 115 -~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~-- 179 (310)
T 1fl2_A 115 -WRNMNVP---GEDQYRTKGVTYCPHCD------GPLFKGKRVAVIGGGNSGVEAAIDLAGIVE---HVTLLEFAPEM-- 179 (310)
T ss_dssp -ECCCCCT---TTTTTBTTTEESCHHHH------GGGGBTCEEEEECCSHHHHHHHHHHHTTBS---EEEEECSSSSC--
T ss_pred -cCCCCCC---ChhhcccceeEEeccCc------HhhcCCCEEEEECCCHHHHHHHHHHHHhCC---EEEEEEeCccc--
Confidence 5677777 77777666566543321 234678999999999999999999998764 59999998763
Q ss_pred cCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccce
Q 009917 244 PDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLT 323 (522)
Q Consensus 244 p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 323 (522)
+ .. ..
T Consensus 180 ~-~~-------~~------------------------------------------------------------------- 184 (310)
T 1fl2_A 180 K-AD-------QV------------------------------------------------------------------- 184 (310)
T ss_dssp C-SC-------HH-------------------------------------------------------------------
T ss_pred C-cc-------HH-------------------------------------------------------------------
Confidence 1 10 00
Q ss_pred eccCCcccccccC-CcEEEeecC-ceeEecC-----cEEEcC---CC-ceecccEEEEecCCCCCccccccccccccccc
Q 009917 324 ITVPEKFYDKVEE-GSIILKKSQ-DFSFCED-----GIVVDG---QT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQDY 392 (522)
Q Consensus 324 ~~~~~~~~~~l~~-g~v~v~~~~-i~~~~~~-----gv~~~d---G~-~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~ 392 (522)
+.+.+++ .+|+++.+. +.++..+ +|++++ |+ ..+++|.||+|||++++.+++... +.
T Consensus 185 ------~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~----l~-- 252 (310)
T 1fl2_A 185 ------LQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA----VE-- 252 (310)
T ss_dssp ------HHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT----SC--
T ss_pred ------HHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhcc----cc--
Confidence 0011222 356666553 6666543 466754 54 238999999999999987554310 10
Q ss_pred ccCCCCCCcccceeecCCCCCceEEEcccCCc--chhhhHHHHHHHHHHHHc
Q 009917 393 LAGSPTEKLPLYREIIHPQIPQLAIIGFSESI--SNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 393 ~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~ia~~l~ 442 (522)
. ++.+.+..... +.++.||+|++|.+... .....+..|++.+|..+.
T Consensus 253 -~-~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 301 (310)
T 1fl2_A 253 -R-NRMGEIIIDAK-CETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 301 (310)
T ss_dssp -B-CTTSCBCCCTT-CBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHH
T ss_pred -c-cCCCcEEcCCC-CccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHH
Confidence 0 12233333332 34789999999976543 245667778887776553
No 21
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.96 E-value=3.8e-29 Score=248.09 Aligned_cols=288 Identities=18% Similarity=0.207 Sum_probs=193.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEec----CCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEA----RSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~----~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (522)
.++|+|||||++|+++|..|++.|++|+|||+ ...+||.|.... ....+..+ +......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~---------~~~~~~~~-------~~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT---------DVENFPGF-------PEGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS---------EECCSTTC-------TTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc---------ccccCCCC-------ccCCCHHH
Confidence 36899999999999999999999999999999 567777765411 00011111 11124578
Q ss_pred HHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 79 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
+.+++.+.++++++ .+++++ |+.++... +.|+|++ ++ .++.||+||+||
T Consensus 72 ~~~~l~~~~~~~gv--~~~~~~-v~~i~~~~----------------------~~~~v~~-~~-----~~~~~~~vv~A~ 120 (333)
T 1vdc_A 72 LTDKFRKQSERFGT--TIFTET-VTKVDFSS----------------------KPFKLFT-DS-----KAILADAVILAI 120 (333)
T ss_dssp HHHHHHHHHHHTTC--EEECCC-CCEEECSS----------------------SSEEEEC-SS-----EEEEEEEEEECC
T ss_pred HHHHHHHHHHHCCC--EEEEeE-EEEEEEcC----------------------CEEEEEE-CC-----cEEEcCEEEECC
Confidence 88999999999888 777775 88887654 4588877 43 579999999999
Q ss_pred cccCCCCCCCCCCCCCCCCc----cCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEE
Q 009917 159 GRFSDVPNIPEFPPKKGPEA----FHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTV 234 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~~----f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~ 234 (522)
|.. |..|.+| |.+. |.+..+|+..+.+.. .....+++|+|||+|.+|+|+|..|++.+. +|++
T Consensus 121 G~~---~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~---~V~l 187 (333)
T 1vdc_A 121 GAV---AKRLSFV---GSGEVLGGFWNRGISACAVCDGA----APIFRNKPLAVIGGGDSAMEEANFLTKYGS---KVYI 187 (333)
T ss_dssp CEE---ECCCCCB---TCSSSSSCCBTTTEESCHHHHTT----SGGGTTSEEEEECCSHHHHHHHHHHTTTSS---EEEE
T ss_pred CCC---cCCCCCC---CccccccccccCcEEEeccCccc----hhhcCCCeEEEECCChHHHHHHHHHHhcCC---eEEE
Confidence 964 5677777 6555 655566655432210 012678999999999999999999998764 5999
Q ss_pred EEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcc
Q 009917 235 LYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSF 314 (522)
Q Consensus 235 v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~ 314 (522)
+.|++.. .+.. .
T Consensus 188 v~~~~~~-~~~~---------~---------------------------------------------------------- 199 (333)
T 1vdc_A 188 IHRRDAF-RASK---------I---------------------------------------------------------- 199 (333)
T ss_dssp ECSSSSC-CSCH---------H----------------------------------------------------------
T ss_pred EecCCcC-CccH---------H----------------------------------------------------------
Confidence 9998752 1100 0
Q ss_pred cccccccceeccCCccc-ccccCCcEEEeecC-ceeEecCc-------EEEc---CCC-ceecccEEEEecCCCCCcccc
Q 009917 315 LQELSSCLTITVPEKFY-DKVEEGSIILKKSQ-DFSFCEDG-------IVVD---GQT-TPLKTDLVILATGFKGDVKLK 381 (522)
Q Consensus 315 ~~~~~~~~~~~~~~~~~-~~l~~g~v~v~~~~-i~~~~~~g-------v~~~---dG~-~~~~~D~VI~aTG~~~~~~l~ 381 (522)
+. +.+++.+|+++.+. +.++..++ |.++ +|+ ..+++|.||+|||++++..++
T Consensus 200 ---------------~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 200 ---------------MQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFL 264 (333)
T ss_dssp ---------------HHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG
T ss_pred ---------------HHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHh
Confidence 00 11234466666554 66665432 7776 453 238999999999999997654
Q ss_pred cccccccccccccCCCCCCcccceeecCCCCCceEEEcccCCc--chhhhHHHHHHHHHHHH
Q 009917 382 NIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSESI--SNLYTSEMRCRWLAELL 441 (522)
Q Consensus 382 ~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~ia~~l 441 (522)
+. . + ..++.+.+.....++.++.||+|++|.+... .....+..|++.+|..+
T Consensus 265 ~~---~-l----~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 318 (333)
T 1vdc_A 265 DG---G-V----ELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDA 318 (333)
T ss_dssp TT---S-S----CBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHH
T ss_pred hc---c-c----cccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHH
Confidence 31 0 1 1122333444444456789999999976543 23555666766666544
No 22
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.96 E-value=1.7e-29 Score=249.06 Aligned_cols=289 Identities=18% Similarity=0.292 Sum_probs=195.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
..++|+|||||++|+++|..|++.|++|+|||+. .+||.|..... ...++.+ +......++.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~---------~~~~~~~-------~~~~~~~~~~~ 66 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE---------VENWPGD-------PNDLTGPLLME 66 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB---------CCCSTTC-------CSSCBHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh---------hhhCCCC-------CCCCCHHHHHH
Confidence 4579999999999999999999999999999974 78888765110 0011111 11234578889
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
++...++++++ .+++++ |+.++... +.|.| +.++ .++.||+||+|||.
T Consensus 67 ~~~~~~~~~~~--~~~~~~-v~~i~~~~----------------------~~~~v-~~~~-----~~~~~~~lv~AtG~- 114 (320)
T 1trb_A 67 RMHEHATKFET--EIIFDH-INKVDLQN----------------------RPFRL-NGDN-----GEYTCDALIIATGA- 114 (320)
T ss_dssp HHHHHHHHTTC--EEECCC-EEEEECSS----------------------SSEEE-EESS-----CEEEEEEEEECCCE-
T ss_pred HHHHHHHHCCC--EEEEee-eeEEEecC----------------------CEEEE-EeCC-----CEEEcCEEEECCCC-
Confidence 99999999988 777775 88887653 45887 5554 57899999999995
Q ss_pred CCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccce
Q 009917 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHW 241 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~ 241 (522)
.|..|.+| |.+.|.+..+|+..+.+ .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+
T Consensus 115 --~~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~ 180 (320)
T 1trb_A 115 --SARYLGLP---SEEAFKGRGVSACATSD------GFFYRNQKVAVIGGGNTAVEEALYLSNIAS---EVHLIHRRDGF 180 (320)
T ss_dssp --EECCCCCH---HHHHTBTTTEESCHHHH------GGGGTTSEEEEECSSHHHHHHHHHHTTTSS---EEEEECSSSSC
T ss_pred --CcCCCCCC---ChHHhCCceeEecccCC------ccccCCCeEEEECCCHHHHHHHHHHHhcCC---eEEEEEeCCcc
Confidence 46777777 76666665566544332 234678999999999999999999998764 59999988752
Q ss_pred eecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccccccc
Q 009917 242 NIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSC 321 (522)
Q Consensus 242 ~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 321 (522)
. +. ..+.
T Consensus 181 ~-~~---------~~~~--------------------------------------------------------------- 187 (320)
T 1trb_A 181 R-AE---------KILI--------------------------------------------------------------- 187 (320)
T ss_dssp C-CC---------HHHH---------------------------------------------------------------
T ss_pred c-cC---------HHHH---------------------------------------------------------------
Confidence 1 10 0000
Q ss_pred ceeccCCcccccccCCcEEEeecC-ceeEecCc-----EEEcC----CC-ceecccEEEEecCCCCCccccccccccccc
Q 009917 322 LTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG-----IVVDG----QT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQ 390 (522)
Q Consensus 322 ~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g-----v~~~d----G~-~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~ 390 (522)
+.+.+.+++.+|+++.+. +.++..++ |++++ |+ ..+++|.||+|||++++..+++. . +.
T Consensus 188 ------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~---~-l~ 257 (320)
T 1trb_A 188 ------KRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEG---Q-LE 257 (320)
T ss_dssp ------HHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGTT---T-SC
T ss_pred ------HHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhcc---c-cc
Confidence 001122344567777664 67776543 77775 53 23899999999999998765431 0 11
Q ss_pred ccccCCCCCCcccceee----cCCCCCceEEEcccCCc--chhhhHHHHHHHHHHHH
Q 009917 391 DYLAGSPTEKLPLYREI----IHPQIPQLAIIGFSESI--SNLYTSEMRCRWLAELL 441 (522)
Q Consensus 391 ~~~~~~~~~~~~ly~~~----~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~ia~~l 441 (522)
. + .+.+.....+ ..++.||+|++|.+... .....+..|++.+|..+
T Consensus 258 ---~-~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 309 (320)
T 1trb_A 258 ---L-E-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDA 309 (320)
T ss_dssp ---E-E-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHH
T ss_pred ---c-c-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHH
Confidence 0 1 2222222222 36789999999976543 23455666777666644
No 23
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.96 E-value=3.2e-29 Score=260.54 Aligned_cols=309 Identities=17% Similarity=0.182 Sum_probs=180.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhH
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (522)
|.+++|+|||||++|+++|..|++. |.+|+|||+++.++ |..+ + .|.. ... .+... ...++...+
T Consensus 1 M~~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~--g----l~~~---~~g-~~~~~-~~~~~~~~~ 67 (472)
T 3iwa_A 1 MSLKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGC--G----IPYY---VSG-EVSNI-ESLQATPYN 67 (472)
T ss_dssp ---CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--cccc--c----cchh---hcC-CCCch-HHhccccch
Confidence 6678999999999999999999998 89999999998764 1110 0 0000 000 00000 011111223
Q ss_pred HHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 79 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
+..|.+.+.+++++ .++++++|+.++... ..+++.+..+|...++.||+||+||
T Consensus 68 ~~~~~~~~~~~~gi--~~~~~~~V~~id~~~------------------------~~v~~~~~~~g~~~~~~~d~lviAt 121 (472)
T 3iwa_A 68 VVRDPEFFRINKDV--EALVETRAHAIDRAA------------------------HTVEIENLRTGERRTLKYDKLVLAL 121 (472)
T ss_dssp -------------C--EEECSEEEEEEETTT------------------------TEEEEEETTTCCEEEEECSEEEECC
T ss_pred hccCHHHHhhhcCc--EEEECCEEEEEECCC------------------------CEEEEeecCCCCEEEEECCEEEEeC
Confidence 56777777777888 788999999998754 2355554333445689999999999
Q ss_pred cccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhh-hhccCCCEEEEEcCCCCHHHHHHHHhhh-cCCCCceEEEE
Q 009917 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAA-ANLVKGKRVTVVGLQKSALDIAMECTTA-NGLENPCTVLY 236 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~-~~~~~gk~VvVIG~G~sg~dia~~l~~~-~~~~~~Vt~v~ 236 (522)
|. .|..|++| |.+ ..+ +++...+.+...... .....+++|+|||+|.+|+|+|..++.. +. +|+++.
T Consensus 122 G~---~p~~p~i~---G~~-~~~-v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~---~Vtlv~ 190 (472)
T 3iwa_A 122 GS---KANRPPVE---GMD-LAG-VTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGI---DTTVVE 190 (472)
T ss_dssp CE---EECCCSCT---TTT-SBT-EEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCC---EEEEEC
T ss_pred CC---CcCCCCCC---CCC-CCC-EEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCC---cEEEEE
Confidence 94 57888888 765 222 444333322110000 0013589999999999999999999988 75 499999
Q ss_pred cccceeec-CCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccc
Q 009917 237 RTEHWNIP-DYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFL 315 (522)
Q Consensus 237 r~~~~~~p-~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~ 315 (522)
|.+. ++| ... ..+ ..
T Consensus 191 ~~~~-~l~~~~~-------~~~--------------------------------~~------------------------ 206 (472)
T 3iwa_A 191 LADQ-IMPGFTS-------KSL--------------------------------SQ------------------------ 206 (472)
T ss_dssp SSSS-SSTTTSC-------HHH--------------------------------HH------------------------
T ss_pred ccCc-ccccccC-------HHH--------------------------------HH------------------------
Confidence 9886 444 221 000 00
Q ss_pred ccccccceeccCCcccccccCCcEEEeecC-ceeEec-Cc---EEEcCCCceecccEEEEecCCCCCccccccccccccc
Q 009917 316 QELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE-DG---IVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQ 390 (522)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~-~g---v~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~ 390 (522)
.+.+.+++.+|+++.+. +.++.. ++ ++++||++ +++|.||+|||++++..+.+....+
T Consensus 207 -------------~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~-i~aD~Vv~a~G~~p~~~l~~~~gl~--- 269 (472)
T 3iwa_A 207 -------------MLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRT-LDADLVILAAGVSPNTQLARDAGLE--- 269 (472)
T ss_dssp -------------HHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCE-EECSEEEECSCEEECCHHHHHHTCC---
T ss_pred -------------HHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCE-EEcCEEEECCCCCcCHHHHHhCCcc---
Confidence 11122344456676663 667754 33 67889988 9999999999999987653321110
Q ss_pred ccccCCCCCCcccceeecCCCCCceEEEcccCC-----------cchhhhHHHHHHHHHHHHcCCC
Q 009917 391 DYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES-----------ISNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 391 ~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-----------~~~~~~~e~qa~~ia~~l~g~~ 445 (522)
. ++.+.+.... .+.++.||+|++|.+.. ....+.+..|++.+|..+.|+.
T Consensus 270 ---~-~~~g~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 330 (472)
T 3iwa_A 270 ---L-DPRGAIIVDT-RMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGD 330 (472)
T ss_dssp ---B-CTTCCEECCT-TCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCC
T ss_pred ---C-CCCCCEEECC-CcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 0 1223232222 34468899999996541 1134679999999999998753
No 24
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.96 E-value=1.1e-28 Score=243.30 Aligned_cols=285 Identities=16% Similarity=0.170 Sum_probs=189.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.+||+|||||++|+++|..|++.|++|+|||+ ..+||.|..... ...++.+ ......++.++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~---------~~~~~~~--------~~~~~~~~~~~ 77 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAEAPL---------VENYLGF--------KSIVGSELAKL 77 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGGCSC---------BCCBTTB--------SSBCHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccccch---------hhhcCCC--------cccCHHHHHHH
Confidence 36899999999999999999999999999999 568888765210 0011110 12345788899
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+.+.++++++ .+.+ ++|..++... +.|.|++ ++ .++.||+||+|||.
T Consensus 78 ~~~~~~~~~v--~~~~-~~v~~i~~~~----------------------~~~~v~~-~~-----~~~~~~~li~AtG~-- 124 (319)
T 3cty_A 78 FADHAANYAK--IREG-VEVRSIKKTQ----------------------GGFDIET-ND-----DTYHAKYVIITTGT-- 124 (319)
T ss_dssp HHHHHHTTSE--EEET-CCEEEEEEET----------------------TEEEEEE-SS-----SEEEEEEEEECCCE--
T ss_pred HHHHHHHcCC--EEEE-eeEEEEEEeC----------------------CEEEEEE-CC-----CEEEeCEEEECCCC--
Confidence 9999998887 6666 6899998754 3477766 33 46899999999995
Q ss_pred CCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccccee
Q 009917 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (522)
Q Consensus 163 ~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~ 242 (522)
.|+.|.+| |.+.|.+..+|.....+ .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++...
T Consensus 125 -~~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viG~G~~g~e~a~~l~~~g~---~V~~i~~~~~~~ 191 (319)
T 3cty_A 125 -THKHLGVK---GESEYFGKGTSYCSTCD------GYLFKGKRVVTIGGGNSGAIAAISMSEYVK---NVTIIEYMPKYM 191 (319)
T ss_dssp -EECCCCCB---TTTTTBTTTEESCHHHH------GGGGBTSEEEEECCSHHHHHHHHHHTTTBS---EEEEECSSSSCC
T ss_pred -CcccCCCC---ChHHhCCceEEEEEecc------hhhcCCCeEEEECCCHHHHHHHHHHHhhCC---cEEEEEcCCccC
Confidence 46777777 77666555455433221 234678999999999999999999998764 599999877521
Q ss_pred ecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccc
Q 009917 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (522)
Q Consensus 243 ~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 322 (522)
+ . ..+
T Consensus 192 -~--~-------~~l----------------------------------------------------------------- 196 (319)
T 3cty_A 192 -C--E-------NAY----------------------------------------------------------------- 196 (319)
T ss_dssp -S--C-------HHH-----------------------------------------------------------------
T ss_pred -C--C-------HHH-----------------------------------------------------------------
Confidence 1 0 000
Q ss_pred eeccCCcccccccCCcEEEeecC-ceeEecC-----cEEEc---CCCc-eecccEEEEecCCCCCccccccccccccccc
Q 009917 323 TITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVD---GQTT-PLKTDLVILATGFKGDVKLKNIFLSQTFQDY 392 (522)
Q Consensus 323 ~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----gv~~~---dG~~-~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~ 392 (522)
.+.+.+.+|+++.+. +.++..+ +|++. +|+. .+++|.||+|||++++.++++....+
T Consensus 197 --------~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~----- 263 (319)
T 3cty_A 197 --------VQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVK----- 263 (319)
T ss_dssp --------HHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCC-----
T ss_pred --------HHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhcccc-----
Confidence 000111223333332 4444332 36665 6752 38999999999999987654422110
Q ss_pred ccCCCCCCcccceeecCCCCCceEEEcccCCc--chhhhHHHHHHHHHHHHc
Q 009917 393 LAGSPTEKLPLYREIIHPQIPQLAIIGFSESI--SNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 393 ~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~ia~~l~ 442 (522)
. ++.+.+..... +.++.||+|++|.+... .....+..|++.+|..+.
T Consensus 264 -~-~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 312 (319)
T 3cty_A 264 -L-DERGYIVVDSR-QRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLY 312 (319)
T ss_dssp -B-CTTSCBCCCTT-CBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred -c-cCCccEeCCCC-CccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHH
Confidence 0 22233333322 45789999999976543 345677888888877654
No 25
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.96 E-value=4e-29 Score=266.77 Aligned_cols=302 Identities=18% Similarity=0.223 Sum_probs=201.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhH
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (522)
|.+++|+|||||++||++|..|++. |.+|+|||+++.++ |.. ..+ |. ... .........
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~--~~~----~~l--p~---~~~--------g~~~~~~~~ 94 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS--FAN----CGL--PY---YIG--------GVITERQKL 94 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS--BCG----GGH--HH---HHT--------TSSCCGGGG
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc--ccC----CCC--ch---hhc--------CcCCChHHh
Confidence 4458999999999999999999997 89999999998765 111 000 00 000 011122334
Q ss_pred HHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 79 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
+..|++.+++++++ .++++++|++++... ..+++.+..+++..++.||+||+||
T Consensus 95 ~~~~~~~~~~~~gi--~v~~~~~V~~id~~~------------------------~~v~v~~~~~g~~~~~~~d~lviAt 148 (588)
T 3ics_A 95 LVQTVERMSKRFNL--DIRVLSEVVKINKEE------------------------KTITIKNVTTNETYNEAYDVLILSP 148 (588)
T ss_dssp BSSCHHHHHHHTTC--EEECSEEEEEEETTT------------------------TEEEEEETTTCCEEEEECSEEEECC
T ss_pred hccCHHHHHHhcCc--EEEECCEEEEEECCC------------------------CEEEEeecCCCCEEEEeCCEEEECC
Confidence 56778888889998 789999999998764 2345544333555689999999999
Q ss_pred cccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHh-hhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEc
Q 009917 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEA-AANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYR 237 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~-~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r 237 (522)
|+ .|..|++| |.+.+.+ ++++..+.+..... ......+|+|+|||+|.+|+|+|..++..+. +|+++.|
T Consensus 149 G~---~p~~p~i~---G~~~~~~-v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~ 218 (588)
T 3ics_A 149 GA---KPIVPSIP---GIEEAKA-LFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGI---EVTLVEM 218 (588)
T ss_dssp CE---EECCCCCT---TTTTCTT-EEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECS
T ss_pred CC---CCCCCCCC---CcccCCC-eEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEec
Confidence 94 57888888 7644433 45544433211000 0012578999999999999999999998865 4999999
Q ss_pred ccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccc
Q 009917 238 TEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQE 317 (522)
Q Consensus 238 ~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 317 (522)
.+. ++|... ..+ ..
T Consensus 219 ~~~-~l~~~~-------~~~--------------------------------~~-------------------------- 232 (588)
T 3ics_A 219 ANQ-VMPPID-------YEM--------------------------------AA-------------------------- 232 (588)
T ss_dssp SSS-SCTTSC-------HHH--------------------------------HH--------------------------
T ss_pred CCc-ccccCC-------HHH--------------------------------HH--------------------------
Confidence 876 444432 000 00
Q ss_pred ccccceeccCCcccccccCCcEEEeecC-ceeEec--CcEEEcCCCceecccEEEEecCCCCCccccccccccccccccc
Q 009917 318 LSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLA 394 (522)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~ 394 (522)
.+.+.+++.+|+++.+. +.+++. ++|++++|++ +++|.||+|||++++..+++..... .
T Consensus 233 -----------~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~-i~~D~Vi~a~G~~p~~~~l~~~g~~------~ 294 (588)
T 3ics_A 233 -----------YVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSV-IQTDMLILAIGVQPESSLAKGAGLA------L 294 (588)
T ss_dssp -----------HHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCE-EECSEEEECSCEEECCHHHHHTTCC------B
T ss_pred -----------HHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCE-EEcCEEEEccCCCCChHHHHhcCce------E
Confidence 01122334456676654 777765 5699999988 9999999999999987654322111 0
Q ss_pred CCCCCCcccceeecCCCCCceEEEcccCC-----------cchhhhHHHHHHHHHHHHcC
Q 009917 395 GSPTEKLPLYREIIHPQIPQLAIIGFSES-----------ISNLYTSEMRCRWLAELLDG 443 (522)
Q Consensus 395 ~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-----------~~~~~~~e~qa~~ia~~l~g 443 (522)
++.+.+... ..+.++.||||++|.+.. ......+..|++.+|..+.|
T Consensus 295 -~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 295 -GVRGTIKVN-EKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp -CGGGCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred -cCCCCEEEC-CccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 112222222 234468899999996542 12356789999999999988
No 26
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.96 E-value=1.4e-27 Score=247.88 Aligned_cols=204 Identities=21% Similarity=0.310 Sum_probs=147.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcC-----CceEEEecCCCccccccc--cccceeecC-----------CccceeecCCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKG-----FHPIVFEARSDIGGAWIK--TVETTMLQT-----------PKQLYQFSDYPW 65 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g-----~~v~i~e~~~~~Gg~w~~--~~~~~~~~~-----------~~~~~~~~~~~~ 65 (522)
+||+|||||++||++|..|++.| .+|+|||+++.+| |.. ..++..++. |...+.|..+..
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 48999999999999999999999 9999999999888 655 335555532 222232221100
Q ss_pred CC-------CCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcE--EE
Q 009917 66 PD-------SVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKW--TV 136 (522)
Q Consensus 66 ~~-------~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v 136 (522)
.. .+...|+++.++.+|+++++++++. .++++++|+++++.. + ..+.| .|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~i~~~~~V~~i~~~~--~-----------------~~~~~~~~V 167 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQE--QSRYGEEVLRIEPML--S-----------------AGQVEALRV 167 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTT--TEEESEEEEEEEEEE--E-----------------TTEEEEEEE
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEEec--C-----------------CCceEEEEE
Confidence 00 0134577889999999999999987 899999999999863 0 02346 55
Q ss_pred EEecCCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCc--eEEeeccCCCCchHhhhhcc-----CCCEEEEE
Q 009917 137 AVEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHG--KVIHSMDYSDMDYEAAANLV-----KGKRVTVV 209 (522)
Q Consensus 137 ~~~~~~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g--~~~hs~~~~~~~~~~~~~~~-----~gk~VvVI 209 (522)
++.++. |+..++.||+||+|||. .|.+|. +.+.+.+ .++|+.+|.... ..+ ++|+|+||
T Consensus 168 ~~~~g~-g~~~~~~~d~lVlAtG~---~p~~p~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~vvVv 233 (463)
T 3s5w_A 168 ISRNAD-GEELVRTTRALVVSPGG---TPRIPQ-----VFRALKGDGRVFHHSQYLEHM-----AKQPCSSGKPMKIAII 233 (463)
T ss_dssp EEEETT-SCEEEEEESEEEECCCC---EECCCG-----GGGGGTTCTTEEEGGGHHHHH-----CC-------CEEEEEE
T ss_pred EEecCC-CceEEEEeCEEEECCCC---CCCCcc-----hhhhcCCCCcEEECHHHHhhH-----HHhhhcccCCCeEEEE
Confidence 555553 45558999999999994 567775 2345556 689998875411 122 68999999
Q ss_pred cCCCCHHHHHHHHhhhcCCCCceEEEEcccceeecCC
Q 009917 210 GLQKSALDIAMECTTANGLENPCTVLYRTEHWNIPDY 246 (522)
Q Consensus 210 G~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~~p~~ 246 (522)
|+|.||+|+|.+|++.... .+|+++.|++. ++|..
T Consensus 234 GgG~sg~e~a~~l~~~~~~-~~Vt~v~r~~~-~~p~~ 268 (463)
T 3s5w_A 234 GGGQSAAEAFIDLNDSYPS-VQADMILRASA-LKPAD 268 (463)
T ss_dssp CCSHHHHHHHHHHHHHCTT-EEEEEECSSSS-CCBCC
T ss_pred CCCHhHHHHHHHHHhcCCC-CeEEEEEeCCC-CcCcc
Confidence 9999999999999998322 46999999987 55654
No 27
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.95 E-value=1.2e-29 Score=255.86 Aligned_cols=281 Identities=12% Similarity=0.090 Sum_probs=186.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
+.+|+|||||+||+++|..|...+.+|+|||+++.++.. . +..+.. +.. ..+.+++..+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~------~--~~l~~~---l~g----------~~~~~~l~~~ 67 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYY------R--PRLNEI---IAK----------NKSIDDILIK 67 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBC------G--GGHHHH---HHS----------CCCGGGTBSS
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcc------c--ChhhHH---HcC----------CCCHHHccCC
Confidence 478999999999999999997788999999998875410 0 000000 000 0112233334
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
..++.+++++ .++++++|+++++.. .+|++.++ +++.||+||+|||+
T Consensus 68 ~~~~~~~~~i--~~~~~~~V~~id~~~------------------------~~v~~~~g-----~~~~yd~lvlAtG~-- 114 (385)
T 3klj_A 68 KNDWYEKNNI--KVITSEFATSIDPNN------------------------KLVTLKSG-----EKIKYEKLIIASGS-- 114 (385)
T ss_dssp CHHHHHHTTC--EEECSCCEEEEETTT------------------------TEEEETTS-----CEEECSEEEECCCE--
T ss_pred CHHHHHHCCC--EEEeCCEEEEEECCC------------------------CEEEECCC-----CEEECCEEEEecCC--
Confidence 4555667788 889999999998764 46777776 57999999999994
Q ss_pred CCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccccee
Q 009917 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (522)
Q Consensus 163 ~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~ 242 (522)
.|+.|++| |.+ .+++...+.+.... ......+|+|+|||+|.+|+|+|..|++.+.+ ||++.|++. +
T Consensus 115 -~p~~p~i~---G~~----~v~~~~~~~d~~~l-~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~---Vtvv~~~~~-~ 181 (385)
T 3klj_A 115 -IANKIKVP---HAD----EIFSLYSYDDALKI-KDECKNKGKAFIIGGGILGIELAQAIIDSGTP---ASIGIILEY-P 181 (385)
T ss_dssp -EECCCCCT---TCS----CEECCSSHHHHHHH-HHHHHHHSCEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSS-S
T ss_pred -CcCCCCCC---CCC----CeEEeCCHHHHHHH-HHHhhcCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEEcCCc-c
Confidence 57888888 765 35554443321100 01112379999999999999999999998754 999999887 4
Q ss_pred ecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccc
Q 009917 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (522)
Q Consensus 243 ~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 322 (522)
+++.. +.. ...
T Consensus 182 l~~~~------~~~--------------------------------~~~------------------------------- 192 (385)
T 3klj_A 182 LERQL------DRD--------------------------------GGL------------------------------- 192 (385)
T ss_dssp CTTTS------CHH--------------------------------HHH-------------------------------
T ss_pred chhhc------CHH--------------------------------HHH-------------------------------
Confidence 44321 000 000
Q ss_pred eeccCCcccccccCCcEEEeecC-ceeEecCcEEEcCCCceecccEEEEecCCCCCcccccccccccccccccCCCCCCc
Q 009917 323 TITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKL 401 (522)
Q Consensus 323 ~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~~~~~~ 401 (522)
.+.+.+++.+|+++.+. +.++ |++ +++|.||+|||++++.++++... +... +++
T Consensus 193 ------~~~~~l~~~gV~~~~~~~v~~i---------g~~-~~~D~vv~a~G~~p~~~~~~~~g--------l~~~-~gi 247 (385)
T 3klj_A 193 ------FLKDKLDRLGIKIYTNSNFEEM---------GDL-IRSSCVITAVGVKPNLDFIKDTE--------IASK-RGI 247 (385)
T ss_dssp ------HHHHHHHTTTCEEECSCCGGGC---------HHH-HHHSEEEECCCEEECCGGGTTSC--------CCBS-SSE
T ss_pred ------HHHHHHHhCCCEEEeCCEEEEc---------CeE-EecCeEEECcCcccChhhhhhcC--------CCcC-CCE
Confidence 01122344456666654 5444 566 99999999999999876543221 1111 223
Q ss_pred ccceeecCCCCCceEEEcccCC-----cchhhhHHHHHHHHHHHHcCCC
Q 009917 402 PLYREIIHPQIPQLAIIGFSES-----ISNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 402 ~ly~~~~~~~~pnl~~iG~~~~-----~~~~~~~e~qa~~ia~~l~g~~ 445 (522)
... ..+.++.||+|++|.+.. +..+..+..|++.+|+.+.|+.
T Consensus 248 ~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 295 (385)
T 3klj_A 248 LVN-DHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGED 295 (385)
T ss_dssp EEC-TTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred EEC-CCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCC
Confidence 222 334568999999996543 3346789999999999998853
No 28
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.95 E-value=1.8e-28 Score=251.63 Aligned_cols=298 Identities=16% Similarity=0.157 Sum_probs=192.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcC--CceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g--~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
.||+|||||+||+++|..|++.| .+|+|||+++..++... .. |.. ....... . ..... .
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-~l-------~~~---~~~~~~~-~-~~~~~------~ 61 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANC-AL-------PYV---IGEVVED-R-RYALA------Y 61 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGG-GH-------HHH---HTTSSCC-G-GGTBC------C
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcc-hh-------HHH---HcCCccc-h-hhhhh------c
Confidence 37999999999999999999987 57999999876542110 00 100 0000000 0 00000 0
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
..+.+.+++++ .++.+++|+.++... ..+++.+..++...++.||+||+|||+
T Consensus 62 ~~~~~~~~~~i--~~~~~~~V~~id~~~------------------------~~~~~~~~~~~~~~~~~yd~lVIATGs- 114 (437)
T 4eqs_A 62 TPEKFYDRKQI--TVKTYHEVIAINDER------------------------QTVSVLNRKTNEQFEESYDKLILSPGA- 114 (437)
T ss_dssp CHHHHHHHHCC--EEEETEEEEEEETTT------------------------TEEEEEETTTTEEEEEECSEEEECCCE-
T ss_pred CHHHHHHhcCC--EEEeCCeEEEEEccC------------------------cEEEEEeccCCceEEEEcCEEEECCCC-
Confidence 11234566777 788899999998754 345665555566678999999999994
Q ss_pred CCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccce
Q 009917 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHW 241 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~ 241 (522)
.|+.|.+| |...|..+.+. +..... ......++++|+|||+|.+|+|+|..++..+.+ ||++.|++.
T Consensus 115 --~p~~p~i~---g~~~~~~~~~~--~~~~l~--~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~- 181 (437)
T 4eqs_A 115 --SANSLGFE---SDITFTLRNLE--DTDAID--QFIKANQVDKVLVVGAGYVSLEVLENLYERGLH---PTLIHRSDK- 181 (437)
T ss_dssp --EECCCCCC---CTTEECCSSHH--HHHHHH--HHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESSSC-
T ss_pred --cccccccc---CceEEeeccHH--HHHHHH--HhhhccCCcEEEEECCccchhhhHHHHHhcCCc---ceeeeeecc-
Confidence 57888777 64443221110 000000 001234588999999999999999999998764 999999887
Q ss_pred eecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccccccc
Q 009917 242 NIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSC 321 (522)
Q Consensus 242 ~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 321 (522)
++|..+ ..
T Consensus 182 ll~~~d---~~--------------------------------------------------------------------- 189 (437)
T 4eqs_A 182 INKLMD---AD--------------------------------------------------------------------- 189 (437)
T ss_dssp CSTTSC---GG---------------------------------------------------------------------
T ss_pred cccccc---ch---------------------------------------------------------------------
Confidence 445432 00
Q ss_pred ceeccCCcccccccCCcEEEeecC-ceeEecCcEEEcCCCceecccEEEEecCCCCCcccccccccccccccccCCCCCC
Q 009917 322 LTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEK 400 (522)
Q Consensus 322 ~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~~~~~ 400 (522)
+.+.+.+.+++.+|+++.+. +++++.+.+++++|++ +++|.||+|+|.+|+..+++... +..+..+.
T Consensus 190 ----~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~-~~~D~vl~a~G~~Pn~~~~~~~g-------l~~~~~G~ 257 (437)
T 4eqs_A 190 ----MNQPILDELDKREIPYRLNEEINAINGNEITFKSGKV-EHYDMIIEGVGTHPNSKFIESSN-------IKLDRKGF 257 (437)
T ss_dssp ----GGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCE-EECSEEEECCCEEESCGGGTTSS-------CCCCTTSC
T ss_pred ----hHHHHHHHhhccceEEEeccEEEEecCCeeeecCCeE-EeeeeEEEEeceecCcHHHHhhh-------hhhccCCc
Confidence 00111223344456666665 7888888999999999 99999999999999876543221 11122233
Q ss_pred cccceeecCCCCCceEEEcccCCc-----------chhhhHHHHHHHHHHHHcCCC
Q 009917 401 LPLYREIIHPQIPQLAIIGFSESI-----------SNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 401 ~~ly~~~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~ia~~l~g~~ 445 (522)
+... ..+.++.||+|++|.+... ...+.+..|++.+|..+.|..
T Consensus 258 I~vd-~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~ 312 (437)
T 4eqs_A 258 IPVN-DKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGND 312 (437)
T ss_dssp EECC-TTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCT
T ss_pred EecC-CCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCC
Confidence 3333 3345789999999965321 135678899999999998764
No 29
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.95 E-value=2.1e-28 Score=255.57 Aligned_cols=311 Identities=17% Similarity=0.163 Sum_probs=186.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCcccee-----ecCCCCCCCCCCCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQ-----FSDYPWPDSVTTDF 73 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 73 (522)
|.++||+|||||++|+++|..|++.|++|+|||+++.+||+|.+ ++|...+..+...+. +..+.+... ...
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~--~~~ 100 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVA--NPK 100 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECC--CCE
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccC--CCc
Confidence 45589999999999999999999999999999999999999987 566554433322221 111111110 011
Q ss_pred CChhHHHHHH-----------HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCC
Q 009917 74 PDHNQVLDYI-----------QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK 142 (522)
Q Consensus 74 ~~~~~~~~yl-----------~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 142 (522)
.....+..+. ....++.++ .+..+ .+..+ . .+.+.|...+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~~---~---------------------~~~~~v~~~~-- 151 (491)
T 3urh_A 101 LNLQKMMAHKDATVKSNVDGVSFLFKKNKI--DGFQG-TGKVL---G---------------------QGKVSVTNEK-- 151 (491)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-EEEEC---S---------------------SSEEEEECTT--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEE-EEEEe---c---------------------CCEEEEEeCC--
Confidence 1222333322 223333443 23222 22211 1 1234444322
Q ss_pred CCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCc-cCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHH
Q 009917 143 NHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEA-FHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAME 221 (522)
Q Consensus 143 ~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~-f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~ 221 (522)
|+..++.||+||+|||+. | |.+| |.+. +.+..+++.+... .....+|+|+|||+|.+|+|+|..
T Consensus 152 -g~~~~~~~d~lViATGs~---p--~~ip---g~~~~~~~~~~~~~~~~~------~~~~~~~~vvViGgG~~g~E~A~~ 216 (491)
T 3urh_A 152 -GEEQVLEAKNVVIATGSD---V--AGIP---GVEVAFDEKTIVSSTGAL------ALEKVPASMIVVGGGVIGLELGSV 216 (491)
T ss_dssp -SCEEEEECSEEEECCCEE---C--CCBT---TBCCCCCSSSEECHHHHT------SCSSCCSEEEEECCSHHHHHHHHH
T ss_pred -CceEEEEeCEEEEccCCC---C--CCCC---CcccccCCeeEEehhHhh------hhhhcCCeEEEECCCHHHHHHHHH
Confidence 445689999999999964 3 3345 5542 4444445443322 123568999999999999999999
Q ss_pred HhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhc
Q 009917 222 CTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKH 301 (522)
Q Consensus 222 l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (522)
|+..+. +||++.|.+. ++|... ..+ ..
T Consensus 217 l~~~g~---~Vtlv~~~~~-~l~~~d-------~~~--------------------------------~~---------- 243 (491)
T 3urh_A 217 WARLGA---KVTVVEFLDT-ILGGMD-------GEV--------------------------------AK---------- 243 (491)
T ss_dssp HHHHTC---EEEEECSSSS-SSSSSC-------HHH--------------------------------HH----------
T ss_pred HHHcCC---EEEEEecccc-ccccCC-------HHH--------------------------------HH----------
Confidence 999875 4999999886 444322 000 00
Q ss_pred cccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC--c--EEEcC---C--CceecccEEEEe
Q 009917 302 RLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--G--IVVDG---Q--TTPLKTDLVILA 371 (522)
Q Consensus 302 ~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~--g--v~~~d---G--~~~~~~D~VI~a 371 (522)
.+.+.+++.+|+++.+. +.++..+ + +.+++ | ++ +++|.||+|
T Consensus 244 ---------------------------~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~Vi~a 295 (491)
T 3urh_A 244 ---------------------------QLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATT-LDAEVVLIA 295 (491)
T ss_dssp ---------------------------HHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEE-EEESEEEEC
T ss_pred ---------------------------HHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEE-EEcCEEEEe
Confidence 01122333455665553 5555432 2 55553 5 34 899999999
Q ss_pred cCCCCCcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccC-CcchhhhHHHHHHHHHHHHcCCC
Q 009917 372 TGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSE-SISNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 372 TG~~~~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~-~~~~~~~~e~qa~~ia~~l~g~~ 445 (522)
||++|+..++.. .+.... ++.+.+..... +.++.||||++|.+. .+...+.+..|++.+|..+.|..
T Consensus 296 ~G~~p~~~~l~l------~~~g~~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 364 (491)
T 3urh_A 296 TGRKPSTDGLGL------AKAGVVLDSRGRVEIDRH-FQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQA 364 (491)
T ss_dssp CCCEECCTTSCH------HHHTCCBCTTSCBCCCTT-CBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTSC
T ss_pred eCCccCCCccCc------hhcCceECCCCCEeECCC-CCCCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCCC
Confidence 999998764211 100010 22232333332 446899999999765 34456789999999999998863
No 30
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.95 E-value=3.8e-28 Score=248.25 Aligned_cols=293 Identities=18% Similarity=0.162 Sum_probs=189.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCc--eEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFH--PIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~--v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
+++|+|||||++|+++|..|++.|.+ |+|||+++.++..... ++. ..........++.
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~---------------l~~-----~~~~~~~~~~~~~ 68 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPP---------------LSK-----EYLAREKTFERIC 68 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGG---------------GGT-----TTTTTSSCSGGGB
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCccc---------------CCH-----HHHcCCCCHHHhc
Confidence 36899999999999999999999987 9999998765321000 000 0000000112232
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
.+...+.++.++ .+.++++|+.++... +.|++.++ .++.||+||+|||+
T Consensus 69 ~~~~~~~~~~~i--~~~~~~~v~~id~~~------------------------~~v~~~~g-----~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 69 IRPAQFWEDKAV--EMKLGAEVVSLDPAA------------------------HTVKLGDG-----SAIEYGKLIWATGG 117 (415)
T ss_dssp SSCHHHHHHTTE--EEEETCCEEEEETTT------------------------TEEEETTS-----CEEEEEEEEECCCE
T ss_pred cCCHHHHHHCCc--EEEeCCEEEEEECCC------------------------CEEEECCC-----CEEEeeEEEEccCC
Confidence 333445566777 788888999998754 56777765 57999999999994
Q ss_pred cCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccC-CCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVK-GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 161 ~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~-gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
.|+.|++| |.+. .+ +++.....+... ....... +++|+|||+|.+|+|+|..++..+. +||++.+.+
T Consensus 118 ---~~~~~~i~---g~~~-~~-v~~~~~~~d~~~-l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtvv~~~~ 185 (415)
T 3lxd_A 118 ---DPRRLSCV---GADL-AG-VHAVRTKEDADR-LMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGV---NVTLLEALP 185 (415)
T ss_dssp ---ECCCCBTT---SSCC-BT-EECCCSHHHHHH-HHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSS
T ss_pred ---ccCCCCCC---Cccc-cC-EEEEcCHHHHHH-HHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCC---eEEEEecCC
Confidence 57888888 6542 11 322211111100 0011234 8999999999999999999998775 499999988
Q ss_pred ceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccccc
Q 009917 240 HWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELS 319 (522)
Q Consensus 240 ~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 319 (522)
. ++++.. + .. ..
T Consensus 186 ~-~l~~~~----~--~~--------------------------------~~----------------------------- 197 (415)
T 3lxd_A 186 R-VLARVA----G--EA--------------------------------LS----------------------------- 197 (415)
T ss_dssp S-TTTTTS----C--HH--------------------------------HH-----------------------------
T ss_pred c-hhhhhc----C--HH--------------------------------HH-----------------------------
Confidence 7 333221 0 00 00
Q ss_pred ccceeccCCcccccccCCcEEEeecC-ceeEecC-----cEEEcCCCceecccEEEEecCCCCCcccccccccccccccc
Q 009917 320 SCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYL 393 (522)
Q Consensus 320 ~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~ 393 (522)
+.+.+.+++.+|+++.+. +.++..+ +|+++||++ +++|.||+|||++++..+++...
T Consensus 198 --------~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~-i~aD~Vv~a~G~~p~~~l~~~~g-------- 260 (415)
T 3lxd_A 198 --------EFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSV-IPADIVIVGIGIVPCVGALISAG-------- 260 (415)
T ss_dssp --------HHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCE-EECSEEEECSCCEESCHHHHHTT--------
T ss_pred --------HHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCE-EEcCEEEECCCCccChHHHHhCC--------
Confidence 011123344566777654 6777543 478899988 99999999999999976543221
Q ss_pred cCCCCCCcccceeecCCCCCceEEEcccCCcc------------hhhhHHHHHHHHHHHHcCCC
Q 009917 394 AGSPTEKLPLYREIIHPQIPQLAIIGFSESIS------------NLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 394 ~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~------------~~~~~e~qa~~ia~~l~g~~ 445 (522)
.... +++... ..+.++.||+|++|.+.... .+..+..|++.+|+.+.|+.
T Consensus 261 l~~~-~gi~vd-~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 322 (415)
T 3lxd_A 261 ASGG-NGVDVD-EFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP 322 (415)
T ss_dssp CCCS-SSEECC-TTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCcC-CCEEEC-CCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC
Confidence 1111 222222 23356799999999554321 24679999999999998864
No 31
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.95 E-value=4.7e-27 Score=246.41 Aligned_cols=287 Identities=15% Similarity=0.191 Sum_probs=199.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.+||+|||||++|+++|..|++.|++|+|+|+ .+||.|.....- ..+. ...+....++.++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~~---------~~~~--------~~~~~~~~~l~~~ 272 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVDI---------ENYI--------SVPKTEGQKLAGA 272 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSCB---------CCBT--------TBSSBCHHHHHHH
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccccc---------cccC--------CCCCCCHHHHHHH
Confidence 47899999999999999999999999999986 589988752110 0011 1123456789999
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+.+.++++++ .++++++|+.+++.. + ..+.|.|++.++ .++.||+||+|||..
T Consensus 273 l~~~~~~~gv--~v~~~~~v~~i~~~~--~-----------------~~~~~~V~~~~g-----~~~~~d~vVlAtG~~- 325 (521)
T 1hyu_A 273 LKAHVSDYDV--DVIDSQSASKLVPAA--T-----------------EGGLHQIETASG-----AVLKARSIIIATGAK- 325 (521)
T ss_dssp HHHHHHTSCE--EEECSCCEEEEECCS--S-----------------TTSCEEEEETTS-----CEEEEEEEEECCCEE-
T ss_pred HHHHHHHcCC--EEEcCCEEEEEEecc--C-----------------CCceEEEEECCC-----CEEEcCEEEECCCCC-
Confidence 9999999998 788999999998753 0 124688988765 579999999999964
Q ss_pred CCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccccee
Q 009917 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (522)
Q Consensus 163 ~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~ 242 (522)
|+.|.+| |.+.|.+..+|...+.+ ...+.+|+|+|||+|.+|+|+|..|+..+. +||++.|.+.+.
T Consensus 326 --~~~~~ip---G~~~~~~~~v~~~~~~~------~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~---~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 326 --WRNMNVP---GEDQYRTKGVTYCPHCD------GPLFKGKRVAVIGGGNSGVEAAIDLAGIVE---HVTLLEFAPEMK 391 (521)
T ss_dssp --ECCCCCT---TTTTTTTTTEECCTTCC------GGGGBTSEEEEECCSHHHHHHHHHHHHHBS---EEEEECSSSSCC
T ss_pred --cCCCCCC---ChhhhcCceEEEeecCc------hhhcCCCeEEEECCCHHHHHHHHHHHhhCC---EEEEEEeCcccC
Confidence 5677778 87777766566554433 234689999999999999999999998875 499999887632
Q ss_pred ecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccc
Q 009917 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (522)
Q Consensus 243 ~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 322 (522)
+. ..
T Consensus 392 -~~---------~~------------------------------------------------------------------ 395 (521)
T 1hyu_A 392 -AD---------QV------------------------------------------------------------------ 395 (521)
T ss_dssp -SC---------HH------------------------------------------------------------------
T ss_pred -cC---------HH------------------------------------------------------------------
Confidence 10 00
Q ss_pred eeccCCcccccccC-CcEEEeecC-ceeEecC-----cEEEcC---CC-ceecccEEEEecCCCCCcccccccccccccc
Q 009917 323 TITVPEKFYDKVEE-GSIILKKSQ-DFSFCED-----GIVVDG---QT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQD 391 (522)
Q Consensus 323 ~~~~~~~~~~~l~~-g~v~v~~~~-i~~~~~~-----gv~~~d---G~-~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~ 391 (522)
+.+.+++ .+|+++.+. +.++..+ +|++.+ |+ ..+++|.||+|||++++..++... +
T Consensus 396 -------l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~----l-- 462 (521)
T 1hyu_A 396 -------LQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGA----L-- 462 (521)
T ss_dssp -------HHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTTT----S--
T ss_pred -------HHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhhh----h--
Confidence 0111222 467777664 6666543 366654 54 238999999999999987654310 1
Q ss_pred cccCCCCCCcccceeecCCCCCceEEEcccCCcc--hhhhHHHHHHHHHHHH
Q 009917 392 YLAGSPTEKLPLYREIIHPQIPQLAIIGFSESIS--NLYTSEMRCRWLAELL 441 (522)
Q Consensus 392 ~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~--~~~~~e~qa~~ia~~l 441 (522)
.-++.+.+.... .+.++.||+|++|.+.... ....+..|++.+|..+
T Consensus 463 --~~~~~G~I~Vd~-~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i 511 (521)
T 1hyu_A 463 --ERNRMGEIIIDA-KCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSA 511 (521)
T ss_dssp --CBCTTSCBCCCT-TCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHH
T ss_pred --ccCCCCcEEeCC-CCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHH
Confidence 001222222222 2346789999999765432 3556677777776644
No 32
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.95 E-value=4.9e-29 Score=254.20 Aligned_cols=293 Identities=13% Similarity=0.181 Sum_probs=187.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCc--eEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhH
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFH--PIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~--v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (522)
|. ++|+|||||++|+++|..|++.|.+ |+|||+++..+..- |.+ +.... .. ..... .
T Consensus 1 M~-~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~----~~l----~~~~~--~g-~~~~~--~------- 59 (410)
T 3ef6_A 1 MA-THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDR----PSL----SKAVL--DG-SLERP--P------- 59 (410)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCS----GGG----GTHHH--HT-SSSSC--C-------
T ss_pred CC-CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCC----ccc----cHHHh--CC-CCCHH--H-------
Confidence 54 5999999999999999999999987 99999987654210 000 00000 00 00000 0
Q ss_pred HHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 79 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
+ .+..++.+++++ .++++++|+.++... +.|++.++ +++.||+||+||
T Consensus 60 ~-~~~~~~~~~~~i--~~~~~~~v~~id~~~------------------------~~v~~~~g-----~~~~~d~lvlAt 107 (410)
T 3ef6_A 60 I-LAEADWYGEARI--DMLTGPEVTALDVQT------------------------RTISLDDG-----TTLSADAIVIAT 107 (410)
T ss_dssp B-SSCTTHHHHTTC--EEEESCCEEEEETTT------------------------TEEEETTS-----CEEECSEEEECC
T ss_pred h-cCCHHHHHHCCC--EEEeCCEEEEEECCC------------------------CEEEECCC-----CEEECCEEEEcc
Confidence 0 111223345677 788999999998754 56877766 579999999999
Q ss_pred cccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcc
Q 009917 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~ 238 (522)
|+ .|+.|++| |.+. ..+++...+.+... .......+|+|+|||+|.+|+|+|..++..+. +||++.|.
T Consensus 108 G~---~p~~~~ip---G~~~--~~v~~~~~~~d~~~-l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtvv~~~ 175 (410)
T 3ef6_A 108 GS---RARTMALP---GSQL--PGVVTLRTYGDVQV-LRDSWTSATRLLIVGGGLIGCEVATTARKLGL---SVTILEAG 175 (410)
T ss_dssp CE---EECCCCCT---TTTS--TTEECCCSHHHHHH-HHHHCCTTCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSS
T ss_pred CC---cccCCCCC---Cccc--cceEEeccHHHHHH-HHHHhccCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecC
Confidence 94 57888888 6542 22444333322110 01123468999999999999999999998765 49999998
Q ss_pred cceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccc
Q 009917 239 EHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQEL 318 (522)
Q Consensus 239 ~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 318 (522)
+.++ ++.. +. .+...
T Consensus 176 ~~~l-~~~~------~~--------------------------------~~~~~-------------------------- 190 (410)
T 3ef6_A 176 DELL-VRVL------GR--------------------------------RIGAW-------------------------- 190 (410)
T ss_dssp SSSS-HHHH------CH--------------------------------HHHHH--------------------------
T ss_pred Cccc-hhhc------CH--------------------------------HHHHH--------------------------
Confidence 7632 2100 00 00000
Q ss_pred cccceeccCCcccccccCCcEEEeecC-ceeEecC----cEEEcCCCceecccEEEEecCCCCCcccccccccccccccc
Q 009917 319 SSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYL 393 (522)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~ 393 (522)
+.+.+++.+|+++.+. +.++..+ +|+++||++ +++|.||+|||++++.++++...
T Consensus 191 -----------l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~-i~aD~Vv~a~G~~p~~~l~~~~g-------- 250 (410)
T 3ef6_A 191 -----------LRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRS-FVADSALICVGAEPADQLARQAG-------- 250 (410)
T ss_dssp -----------HHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCE-EECSEEEECSCEEECCHHHHHTT--------
T ss_pred -----------HHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCE-EEcCEEEEeeCCeecHHHHHhCC--------
Confidence 1122333456666554 6677654 488999998 99999999999999876543221
Q ss_pred cCCCCCCcccceeecCCCCCceEEEcccCCcc----------hhhhHHHHHHHHHHHHcCCC
Q 009917 394 AGSPTEKLPLYREIIHPQIPQLAIIGFSESIS----------NLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 394 ~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~----------~~~~~e~qa~~ia~~l~g~~ 445 (522)
.... +.+.... .+.++.||+|++|.+.... .+..+..|++.+|+.+.|+.
T Consensus 251 l~~~-~gi~vd~-~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 310 (410)
T 3ef6_A 251 LACD-RGVIVDH-CGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKN 310 (410)
T ss_dssp CCBS-SSEECCT-TSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CccC-CeEEEcc-CeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCC
Confidence 1111 2222222 2356889999999654321 25789999999999998864
No 33
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.95 E-value=7e-29 Score=257.32 Aligned_cols=304 Identities=14% Similarity=0.112 Sum_probs=186.3
Q ss_pred CC-CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCcccee-ecCCCCCCCCCCCCCCh
Q 009917 1 ME-KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQ-FSDYPWPDSVTTDFPDH 76 (522)
Q Consensus 1 m~-~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 76 (522)
|. ++||+|||||++|+++|..|++.|++|+|||+++.+||+|.+ +.|...+..+...+. +...+.. ......
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~----~~~~~~ 76 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV----KIPLDF 76 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS----CCCCCH
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC----CCCcCH
Confidence 54 379999999999999999999999999999999999999987 555433322211110 0000000 111122
Q ss_pred hHHHH------------HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCC
Q 009917 77 NQVLD------------YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNH 144 (522)
Q Consensus 77 ~~~~~------------yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g 144 (522)
..+.. ++....++.++ .+..+ ++..++. +.+.|...++
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v--~~~~g-~v~~id~------------------------~~~~V~~~~g--- 126 (466)
T 3l8k_A 77 STVQDRKDYVQELRFKQHKRNMSQYETL--TFYKG-YVKIKDP------------------------THVIVKTDEG--- 126 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCTTE--EEESE-EEEEEET------------------------TEEEEEETTS---
T ss_pred HHHHHHHHhheeccccchHHHHHHhCCC--EEEEe-EEEEecC------------------------CeEEEEcCCC---
Confidence 33332 22233333343 33333 5655553 2366766543
Q ss_pred ceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhh
Q 009917 145 STEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTT 224 (522)
Q Consensus 145 ~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~ 224 (522)
+..++.||+||+|||+ .|..|++| |.+ .++++.++..... .....+|+|+|||+|.+|+|+|..|+.
T Consensus 127 ~~~~~~~d~lviAtG~---~p~~p~i~---G~~----~~~t~~~~~~~~~---~l~~~~~~vvViGgG~~g~e~A~~l~~ 193 (466)
T 3l8k_A 127 KEIEAETRYMIIASGA---ETAKLRLP---GVE----YCLTSDDIFGYKT---SFRKLPQDMVIIGAGYIGLEIASIFRL 193 (466)
T ss_dssp CEEEEEEEEEEECCCE---EECCCCCT---TGG----GSBCHHHHHSTTC---SCCSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred cEEEEecCEEEECCCC---CccCCCCC---Ccc----ceEeHHHHHHHHH---HHhhCCCeEEEECCCHHHHHHHHHHHH
Confidence 2234999999999994 57888888 765 2444444331100 012357999999999999999999998
Q ss_pred hcCCCCceEEEEcccceeecCC-CCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccc
Q 009917 225 ANGLENPCTVLYRTEHWNIPDY-FPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (522)
Q Consensus 225 ~~~~~~~Vt~v~r~~~~~~p~~-~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (522)
.+. +|+++.|.+. ++|.. . ..+ .+.+.+.
T Consensus 194 ~g~---~Vtlv~~~~~-~l~~~~d-------~~~--------------------------------~~~l~~~------- 223 (466)
T 3l8k_A 194 MGV---QTHIIEMLDR-ALITLED-------QDI--------------------------------VNTLLSI------- 223 (466)
T ss_dssp TTC---EEEEECSSSS-SCTTSCC-------HHH--------------------------------HHHHHHH-------
T ss_pred cCC---EEEEEEeCCc-CCCCCCC-------HHH--------------------------------HHHHHhc-------
Confidence 875 4999999887 44443 2 000 0011111
Q ss_pred cccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEec---Cc--EEEc--CCC--ceecccEEEEecC
Q 009917 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE---DG--IVVD--GQT--TPLKTDLVILATG 373 (522)
Q Consensus 304 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~---~g--v~~~--dG~--~~~~~D~VI~aTG 373 (522)
++ |+++.+. +.++.. ++ |.++ ||+ + +++|.||+|||
T Consensus 224 ------------------------------l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~-i~~D~vi~a~G 269 (466)
T 3l8k_A 224 ------------------------------LK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKS-IFTNSVVLAAG 269 (466)
T ss_dssp ------------------------------HC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEE-EEESCEEECCC
T ss_pred ------------------------------CE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEE-EEcCEEEECcC
Confidence 11 3344332 445543 22 5666 676 5 89999999999
Q ss_pred CCCCccc-ccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCC
Q 009917 374 FKGDVKL-KNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 374 ~~~~~~l-~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
++|+..| ++... +.-++.+ +... ..+.++.||||++|.+.. +.....+..|++.++..+.|.
T Consensus 270 ~~p~~~l~l~~~g-------l~~~~~G-i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 270 RRPVIPEGAREIG-------LSISKTG-IVVD-ETMKTNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp EEECCCTTTGGGT-------CCBCSSS-BCCC-TTCBCSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred CCcccccchhhcC-------ceeCCCC-EeEC-CCccCCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCC
Confidence 9998762 11111 0002223 3333 334568999999997665 445678999999999988764
No 34
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.95 E-value=1.2e-27 Score=247.06 Aligned_cols=296 Identities=15% Similarity=0.165 Sum_probs=188.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhH
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (522)
|. ++|+|||||++|+++|..|++. |.+|+|||+++.+|..... + ..+. ...+....+
T Consensus 1 M~-~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~----~--------~~~~--------~~~~~~~~~ 59 (452)
T 3oc4_A 1 MS-LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGG----L--------SAYF--------NHTINELHE 59 (452)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC-----------------------------------
T ss_pred CC-CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCcc----c--------hhhh--------cCCCCCHHH
Confidence 54 6999999999999999999997 8999999999877621100 0 0000 000001111
Q ss_pred HHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 79 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
+..+.....+++++ .++++++|++++... +.+.++.. +...++.||+||+||
T Consensus 60 ~~~~~~~~~~~~gi--~~~~~~~V~~id~~~----------------------~~v~v~~~----~~~~~~~~d~lviAt 111 (452)
T 3oc4_A 60 ARYITEEELRRQKI--QLLLNREVVAMDVEN----------------------QLIAWTRK----EEQQWYSYDKLILAT 111 (452)
T ss_dssp -CCCCHHHHHHTTE--EEECSCEEEEEETTT----------------------TEEEEEET----TEEEEEECSEEEECC
T ss_pred hhcCCHHHHHHCCC--EEEECCEEEEEECCC----------------------CEEEEEec----CceEEEEcCEEEECC
Confidence 11112334456777 788899999998764 33555411 223679999999999
Q ss_pred cccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcc
Q 009917 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~ 238 (522)
| +.|..|++| |.+. ..++++..+.+.... ......+|+|+|||+|.+|+|+|..++..+. +||++.|.
T Consensus 112 G---~~p~~p~i~---g~~~--~~v~~~~~~~~~~~~-~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~ 179 (452)
T 3oc4_A 112 G---ASQFSTQIR---GSQT--EKLLKYKFLSGALAA-VPLLENSQTVAVIGAGPIGMEAIDFLVKMKK---TVHVFESL 179 (452)
T ss_dssp C---CCBCCCCCB---TTTC--TTEEEGGGCC----C-CHHHHTCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred C---cccCCCCCC---CCCC--CCEEEeCCHHHHHHH-HHHHhcCCEEEEECCCHHHHHHHHHHHhCCC---eEEEEEcc
Confidence 9 568888888 6653 236666555432100 0123568999999999999999999998875 49999998
Q ss_pred cceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccc
Q 009917 239 EHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQEL 318 (522)
Q Consensus 239 ~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 318 (522)
+. ++|... +..
T Consensus 180 ~~-~l~~~~------d~~-------------------------------------------------------------- 190 (452)
T 3oc4_A 180 EN-LLPKYF------DKE-------------------------------------------------------------- 190 (452)
T ss_dssp SS-SSTTTC------CHH--------------------------------------------------------------
T ss_pred Cc-cccccC------CHH--------------------------------------------------------------
Confidence 87 444311 000
Q ss_pred cccceeccCCcccccccCCcEEEeecC-ceeEe--cCc--EEEcCCCceecccEEEEecCCCCCcccccccccccccccc
Q 009917 319 SSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFC--EDG--IVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYL 393 (522)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~--~~g--v~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~ 393 (522)
+.+.+.+.+++.+|+++.+. +.++. +++ |.+++| + +++|.||+|||++|+..+++.. +
T Consensus 191 -------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~-i~aD~Vv~A~G~~p~~~~l~~~--------~ 253 (452)
T 3oc4_A 191 -------MVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-E-ISCDSGIFALNLHPQLAYLDKK--------I 253 (452)
T ss_dssp -------HHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-E-EEESEEEECSCCBCCCSSCCTT--------S
T ss_pred -------HHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-E-EEeCEEEECcCCCCChHHHHhh--------h
Confidence 00111233445667777764 77776 233 556666 6 9999999999999997654321 1
Q ss_pred cCCCCCCcccceeecCCCCCceEEEcccCCc-----------chhhhHHHHHHHHHHHHcCC
Q 009917 394 AGSPTEKLPLYREIIHPQIPQLAIIGFSESI-----------SNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 394 ~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~ia~~l~g~ 444 (522)
.-++.+.+.... .+.++.||+|++|.+... ...+.+..|++.++..+.|.
T Consensus 254 ~~~~~g~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~ 314 (452)
T 3oc4_A 254 QRNLDQTIAVDA-YLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEK 314 (452)
T ss_dssp CBCTTSCBCCCT-TCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSC
T ss_pred ccCCCCCEEECc-CccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCC
Confidence 112233333332 345689999999966543 24567999999999988875
No 35
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.95 E-value=1.6e-28 Score=250.03 Aligned_cols=292 Identities=14% Similarity=0.202 Sum_probs=186.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC--ceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
+++|+|||||++|+++|..|++.|. +|+|||+++..+.. . |. .+...+.. ... ..++.
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~--~--~~----l~~~~l~~---~~~---------~~~~~ 60 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQ--R--PP----LSKAYLKS---GGD---------PNSLM 60 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBC--S--GG----GGTGGGGS---CCC---------TTSSB
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCC--C--cc----CCHHHHCC---CCC---------HHHcc
Confidence 3689999999999999999999998 89999998754311 0 00 00000000 000 01111
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
.+...+..+.++ .+.. ++|+.++... ..|++.++ .++.||+||+|||.
T Consensus 61 ~~~~~~~~~~~i--~~~~-~~v~~id~~~------------------------~~v~~~~g-----~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 61 FRPEKFFQDQAI--ELIS-DRMVSIDREG------------------------RKLLLASG-----TAIEYGHLVLATGA 108 (404)
T ss_dssp SSCHHHHHHTTE--EEEC-CCEEEEETTT------------------------TEEEESSS-----CEEECSEEEECCCE
T ss_pred CCCHHHHHhCCC--EEEE-EEEEEEECCC------------------------CEEEECCC-----CEEECCEEEEeeCC
Confidence 122333455666 6666 8899988654 46777766 57899999999994
Q ss_pred cCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 161 ~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.|+.|++| |.+. .+ +++.....+.. ........+++|+|||+|.+|+|+|..++..+. +|+++.+.+.
T Consensus 109 ---~p~~~~i~---g~~~-~~-v~~~~~~~d~~-~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtvv~~~~~ 176 (404)
T 3fg2_P 109 ---RNRMLDVP---NASL-PD-VLYLRTLDESE-VLRQRMPDKKHVVVIGAGFIGLEFAATARAKGL---EVDVVELAPR 176 (404)
T ss_dssp ---EECCCCST---TTTS-TT-EECCSSHHHHH-HHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSS
T ss_pred ---CccCCCCC---CCCC-Cc-EEEECCHHHHH-HHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCCc
Confidence 57888888 6542 22 33322221110 001223468999999999999999999998765 4999999886
Q ss_pred eeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccc
Q 009917 241 WNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSS 320 (522)
Q Consensus 241 ~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 320 (522)
+ +++.. + ..
T Consensus 177 ~-~~~~~----~--~~---------------------------------------------------------------- 185 (404)
T 3fg2_P 177 V-MARVV----T--PE---------------------------------------------------------------- 185 (404)
T ss_dssp T-TTTTS----C--HH----------------------------------------------------------------
T ss_pred c-hhhcc----C--HH----------------------------------------------------------------
Confidence 3 33211 0 00
Q ss_pred cceeccCCcccccccCCcEEEeecC-ceeEecC-----cEEEcCCCceecccEEEEecCCCCCccccccccccccccccc
Q 009917 321 CLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLA 394 (522)
Q Consensus 321 ~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~ 394 (522)
+.+.+.+.+++.+|+++.+. +.++..+ +|+++||++ +++|.||+|||++++..+++... .
T Consensus 186 -----~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~-i~aD~Vv~a~G~~p~~~l~~~~g--------l 251 (404)
T 3fg2_P 186 -----ISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNT-LPCDLVVVGVGVIPNVEIAAAAG--------L 251 (404)
T ss_dssp -----HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCE-EECSEEEECCCEEECCHHHHHTT--------C
T ss_pred -----HHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCE-EEcCEEEECcCCccCHHHHHhCC--------C
Confidence 00011123344566777664 6777543 488899998 99999999999999876543221 1
Q ss_pred CCCCCCcccceeecCCCCCceEEEcccCCcc-----------hhhhHHHHHHHHHHHHcCCC
Q 009917 395 GSPTEKLPLYREIIHPQIPQLAIIGFSESIS-----------NLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 395 ~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~-----------~~~~~e~qa~~ia~~l~g~~ 445 (522)
..+ +++.. ...+.++.||+|++|.+.... .+..+..|++.+|+.+.|+.
T Consensus 252 ~~~-~Gi~v-d~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 311 (404)
T 3fg2_P 252 PTA-AGIIV-DQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA 311 (404)
T ss_dssp CBS-SSEEE-CTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC
T ss_pred CCC-CCEEE-CCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC
Confidence 111 12222 223446799999999654322 25779999999999998864
No 36
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.95 E-value=2.5e-28 Score=259.76 Aligned_cols=300 Identities=18% Similarity=0.174 Sum_probs=191.2
Q ss_pred CcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
++|+|||||++||++|..|++. +.+|+|||+++.++.... ..|. ... ....+....+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~-~l~~----------~~~--------~~~~~~~~~~~~ 62 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANC-GLPY----------HIS--------GEIAQRSALVLQ 62 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG-GHHH----------HHT--------SSSCCGGGGBCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccccc-CchH----------Hhc--------CCcCChHHhhcc
Confidence 5899999999999999999997 789999999987651100 0000 000 011112344556
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
++..+++++++ .++++++|++++... + .+++.+..++...++.||+||+|||+
T Consensus 63 ~~~~~~~~~~i--~~~~~~~V~~id~~~----------------------~--~v~~~~~~~g~~~~~~~d~lviAtG~- 115 (565)
T 3ntd_A 63 TPESFKARFNV--EVRVKHEVVAIDRAA----------------------K--LVTVRRLLDGSEYQESYDTLLLSPGA- 115 (565)
T ss_dssp CHHHHHHHHCC--EEETTEEEEEEETTT----------------------T--EEEEEETTTCCEEEEECSEEEECCCE-
T ss_pred CHHHHHHhcCc--EEEECCEEEEEECCC----------------------C--EEEEEecCCCCeEEEECCEEEECCCC-
Confidence 77788888888 788999999998754 2 34554433345568999999999995
Q ss_pred CCCCCCCCCCCCCCCCccCceEEeeccCCCCchHh-hhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEA-AANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~-~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.|+.|++| |.+.. .+++.....+..... ......+|+|+|||+|.+|+|+|..|+..+. +||++.|.+.
T Consensus 116 --~p~~p~ip---G~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~ 185 (565)
T 3ntd_A 116 --APIVPPIP---GVDNP--LTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGI---KTTLLELADQ 185 (565)
T ss_dssp --EECCCCCT---TCCST--TEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSS
T ss_pred --CCCCCCCC---CCCCC--CEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCC---cEEEEEcCCc
Confidence 57888888 76532 233333322211000 0022568999999999999999999998865 4999999886
Q ss_pred eeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccc
Q 009917 241 WNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSS 320 (522)
Q Consensus 241 ~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 320 (522)
++|... ..+ ...+.
T Consensus 186 -~l~~~~-------~~~--------------------------------~~~l~-------------------------- 199 (565)
T 3ntd_A 186 -VMTPVD-------REM--------------------------------AGFAH-------------------------- 199 (565)
T ss_dssp -SCTTSC-------HHH--------------------------------HHHHH--------------------------
T ss_pred -cchhcC-------HHH--------------------------------HHHHH--------------------------
Confidence 445322 000 00011
Q ss_pred cceeccCCcccccccCCcEEEeecC-ceeEec--------------------C---cEEEcCCCceecccEEEEecCCCC
Q 009917 321 CLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--------------------D---GIVVDGQTTPLKTDLVILATGFKG 376 (522)
Q Consensus 321 ~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--------------------~---gv~~~dG~~~~~~D~VI~aTG~~~ 376 (522)
+.+++.+|+++.+. +.++.. + .++++||++ +++|.||+|||+++
T Consensus 200 -----------~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~-i~~D~vi~a~G~~p 267 (565)
T 3ntd_A 200 -----------QAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGEL-LETDLLIMAIGVRP 267 (565)
T ss_dssp -----------HHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCE-EEESEEEECSCEEE
T ss_pred -----------HHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCE-EEcCEEEECcCCcc
Confidence 11222233443332 333332 1 266788887 99999999999999
Q ss_pred CcccccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCC-------c----chhhhHHHHHHHHHHHHcCCC
Q 009917 377 DVKLKNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES-------I----SNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 377 ~~~l~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-------~----~~~~~~e~qa~~ia~~l~g~~ 445 (522)
+..+.+..... . ++.+.+... ..+.++.||+|++|.+.. . .....+..|++.+|..+.|+.
T Consensus 268 ~~~l~~~~g~~------~-~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 339 (565)
T 3ntd_A 268 ETQLARDAGLA------I-GELGGIKVN-AMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE 339 (565)
T ss_dssp CCHHHHHHTCC------B-CTTSSBCCC-TTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred chHHHHhCCcc------c-CCCCCEEEC-CCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 87653321110 0 122333332 234568999999996541 1 135678999999999998864
No 37
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.95 E-value=8.3e-28 Score=248.21 Aligned_cols=296 Identities=17% Similarity=0.228 Sum_probs=183.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhH
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (522)
|.+++|+|||||++|+++|..|++. +.+|+|||+++.+++.. +..|.. ........+
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~--------~~~p~~-------------~~~~~~~~~ 59 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP--------CGIPYV-------------VEGLSTPDK 59 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---------------------------------------
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC--------cCCccc-------------cCCCCCHHH
Confidence 7778999999999999999999997 78999999988664221 111110 000111123
Q ss_pred HHHH-HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEe
Q 009917 79 VLDY-IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILC 157 (522)
Q Consensus 79 ~~~y-l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvA 157 (522)
+..+ .+.+++++++ .++++++|+.++... +.|.+.++ ..++.||+||+|
T Consensus 60 ~~~~~~~~~~~~~gi--~v~~~~~v~~i~~~~------------------------~~v~~~~g----~~~~~~d~lviA 109 (449)
T 3kd9_A 60 LMYYPPEVFIKKRGI--DLHLNAEVIEVDTGY------------------------VRVRENGG----EKSYEWDYLVFA 109 (449)
T ss_dssp ------CTHHHHTTC--EEETTCEEEEECSSE------------------------EEEECSSS----EEEEECSEEEEC
T ss_pred hhhcCHHHHHHhcCc--EEEecCEEEEEecCC------------------------CEEEECCc----eEEEEcCEEEEC
Confidence 3332 3445567888 889999999987543 66755333 247899999999
Q ss_pred ecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCch-HhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEE
Q 009917 158 VGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDY-EAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLY 236 (522)
Q Consensus 158 tG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~-~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~ 236 (522)
||. .|+.|++| |.+. .+ ++......+... ......+.+|+|+|||+|.+|+|+|..++..+. +|+++.
T Consensus 110 tG~---~p~~p~i~---G~~~-~~-v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~ 178 (449)
T 3kd9_A 110 NGA---SPQVPAIE---GVNL-KG-VFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGK---NVTMIV 178 (449)
T ss_dssp CCE---EECCCSCB---TTTS-TT-EECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEE
T ss_pred CCC---CCCCCCCC---CCCC-CC-EEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEE
Confidence 994 57888888 6543 22 333222211100 001122478999999999999999999998765 499999
Q ss_pred cccceeecC-CCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccc
Q 009917 237 RTEHWNIPD-YFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFL 315 (522)
Q Consensus 237 r~~~~~~p~-~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~ 315 (522)
|.+. +++. .. .. +...
T Consensus 179 ~~~~-~l~~~~~-------~~--------------------------------~~~~----------------------- 195 (449)
T 3kd9_A 179 RGER-VLRRSFD-------KE--------------------------------VTDI----------------------- 195 (449)
T ss_dssp SSSS-TTTTTSC-------HH--------------------------------HHHH-----------------------
T ss_pred cCCc-cchhhcC-------HH--------------------------------HHHH-----------------------
Confidence 9886 3343 21 00 0000
Q ss_pred ccccccceeccCCcccccccCCcEEEeecC-ceeEecCc---EEEcCCCceecccEEEEecCCCCCcccccccccccccc
Q 009917 316 QELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG---IVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQD 391 (522)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g---v~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~ 391 (522)
+.+.+++. |+++.+. +.++..++ .++.+|++ +++|.||+|||++|+..+++....+
T Consensus 196 --------------l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~-i~~D~Vv~a~G~~p~~~l~~~~gl~---- 255 (449)
T 3kd9_A 196 --------------LEEKLKKH-VNLRLQEITMKIEGEERVEKVVTDAGE-YKAELVILATGIKPNIELAKQLGVR---- 255 (449)
T ss_dssp --------------HHHHHTTT-SEEEESCCEEEEECSSSCCEEEETTEE-EECSEEEECSCEEECCHHHHHTTCC----
T ss_pred --------------HHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCCE-EECCEEEEeeCCccCHHHHHhCCcc----
Confidence 11223333 5555543 55665433 35677877 9999999999999987654322111
Q ss_pred cccCCCCCCcccceeecCCCCCceEEEcccCC-----------cchhhhHHHHHHHHHHHHcCCC
Q 009917 392 YLAGSPTEKLPLYREIIHPQIPQLAIIGFSES-----------ISNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 392 ~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-----------~~~~~~~e~qa~~ia~~l~g~~ 445 (522)
. ++.+.+.... .+.++.||+|++|.+.. +...+.+..|++.++..+.|..
T Consensus 256 --~-~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~ 316 (449)
T 3kd9_A 256 --I-GETGAIWTNE-KMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKE 316 (449)
T ss_dssp --B-CTTSSBCCCT-TCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred --C-CCCCCEEECC-CCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCC
Confidence 0 1222233322 34568999999996542 1245689999999999998863
No 38
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.95 E-value=2.2e-27 Score=232.33 Aligned_cols=177 Identities=16% Similarity=0.185 Sum_probs=123.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
|+++||+|||||||||+||..|++.|++|+|||+. ..||.+...||+ ++.. .-....++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~~~~~~~--------------~~~~-----~~~~~~~~~ 63 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRVTQNSHG--------------FITR-----DGIKPEEFK 63 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGGSSCBCC--------------STTC-----TTBCHHHHH
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCeeeeecCC--------------ccCC-----CCCCHHHHH
Confidence 78899999999999999999999999999999986 467665443332 1111 112445666
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
+...+.+.+++. ...++..+..+.... ++.++|.+.++ +++.||+||+|||
T Consensus 64 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~---------------------~~~~~v~~~~g-----~~~~a~~liiATG- 114 (304)
T 4fk1_A 64 EIGLNEVMKYPS--VHYYEKTVVMITKQS---------------------TGLFEIVTKDH-----TKYLAERVLLATG- 114 (304)
T ss_dssp HHHHHHHTTSTT--EEEEECCEEEEEECT---------------------TSCEEEEETTC-----CEEEEEEEEECCC-
T ss_pred HHHHHHHHhcCC--EEEEeeEEEEeeecC---------------------CCcEEEEECCC-----CEEEeCEEEEccC-
Confidence 666666666654 344566677776654 35588887776 6899999999999
Q ss_pred cCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCC-HHHHHHHHhhhcCCCCceEEEEccc
Q 009917 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKS-ALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 161 ~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~s-g~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
+.|+.|++| |.+.+.+..++.....+ ....++++++|||+|.. ++++|..+...+. +|+++.|.+
T Consensus 115 --s~p~~p~i~---G~~~~~~~~v~~~~~~~------~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~---~v~i~~~~~ 180 (304)
T 4fk1_A 115 --MQEEFPSIP---NVREYYGKSLFSCPYCD------GWELKDQPLIIISENEDHTLHMTKLVYNWST---DLVIATNGN 180 (304)
T ss_dssp --CEEECCSCT---THHHHBTTTEESCHHHH------SGGGTTSCEEEECCSHHHHHHHHHHHTTTCS---CEEEECSSC
T ss_pred --Ccccccccc---Cccccccceeeeccccc------hhHhcCCceeeecCCCchhhhHHHHHHhCCc---eEEEEeccc
Confidence 468888888 87777665454433322 23467899999999876 5677776666554 488887754
Q ss_pred c
Q 009917 240 H 240 (522)
Q Consensus 240 ~ 240 (522)
.
T Consensus 181 ~ 181 (304)
T 4fk1_A 181 E 181 (304)
T ss_dssp C
T ss_pred c
Confidence 3
No 39
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.95 E-value=4.1e-28 Score=252.97 Aligned_cols=308 Identities=17% Similarity=0.195 Sum_probs=194.9
Q ss_pred CC-CCcEEEECCChhHHHHHHHHHh-cCCceEEEe--------cCCCccccccc--cccceeecCCccce----eecCCC
Q 009917 1 ME-KKQIAIVGAGVSGLLACKYLLL-KGFHPIVFE--------ARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYP 64 (522)
Q Consensus 1 m~-~~~vvIIGaG~aGl~~a~~l~~-~g~~v~i~e--------~~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~ 64 (522)
|. ++||+|||||++|+++|..|++ .|++|+||| +...+||+|.+ ++|...+......+ .+..+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g 83 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFG 83 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcC
Confidence 54 4799999999999999999999 999999999 35689999987 56654432221111 112222
Q ss_pred CCCCCCCC--CCChhHHHHHHHHHHH-----------hc-CCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCC
Q 009917 65 WPDSVTTD--FPDHNQVLDYIQSYAS-----------HF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGS 130 (522)
Q Consensus 65 ~~~~~~~~--~~~~~~~~~yl~~~~~-----------~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (522)
+... .. .....++.++.+++.+ +. ++ .+..+ ++..++ .
T Consensus 84 ~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g-~~~~i~--~--------------------- 135 (495)
T 2wpf_A 84 WEFD--GSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGL--DFFLG-WGSLES--K--------------------- 135 (495)
T ss_dssp EECC--GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTE--EEEES-EEEEEE--T---------------------
T ss_pred cccC--CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCe--EEEEe-EEEEee--C---------------------
Confidence 2110 00 1233455555444433 33 44 34333 344432 1
Q ss_pred CCcEEEEEecCCC---CceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEE
Q 009917 131 RGKWTVAVEDAKN---HSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVT 207 (522)
Q Consensus 131 ~~~~~v~~~~~~~---g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~Vv 207 (522)
++|++.+..+ +..+++.||+||+|||+ .|..|.+| |.+ .++++.++..+ ...+++|+
T Consensus 136 ---~~v~v~~~~~~~~~~~~~~~~d~lViATGs---~p~~p~i~---G~~----~~~~~~~~~~~-------~~~~~~vv 195 (495)
T 2wpf_A 136 ---NVVVVRETADPKSAVKERLQADHILLATGS---WPQMPAIP---GIE----HCISSNEAFYL-------PEPPRRVL 195 (495)
T ss_dssp ---TEEEEESSSSTTSCEEEEEEEEEEEECCCE---EECCCCCT---TGG----GCEEHHHHTTC-------SSCCSEEE
T ss_pred ---CEEEEeecCCccCCCCeEEEcCEEEEeCCC---CcCCCCCC---Ccc----ccccHHHHHhh-------hhcCCeEE
Confidence 4577763211 00257999999999994 57788888 764 25666665543 23579999
Q ss_pred EEcCCCCHHHHHHHHhhh---cCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhh
Q 009917 208 VVGLQKSALDIAMECTTA---NGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSP 284 (522)
Q Consensus 208 VIG~G~sg~dia~~l~~~---~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 284 (522)
|||+|.+|+|+|..|+.. +. +||++.|.+. ++|..+ ..+
T Consensus 196 ViGgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~-~l~~~d-------~~~--------------------------- 237 (495)
T 2wpf_A 196 TVGGGFISVEFAGIFNAYKPPGG---KVTLCYRNNL-ILRGFD-------ETI--------------------------- 237 (495)
T ss_dssp EECSSHHHHHHHHHHHHHCCTTC---EEEEEESSSS-SCTTSC-------HHH---------------------------
T ss_pred EECCCHHHHHHHHHHHhhCCCCC---eEEEEEcCCc-cccccC-------HHH---------------------------
Confidence 999999999999999988 64 5999999886 445432 000
Q ss_pred hHHHHHHHHHHHHhhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC-----cEEEcC
Q 009917 285 LRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDG 358 (522)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----gv~~~d 358 (522)
.. .+.+.+++.+|+++.+. +.++..+ .|+++|
T Consensus 238 -----~~-------------------------------------~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~ 275 (495)
T 2wpf_A 238 -----RE-------------------------------------EVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFES 275 (495)
T ss_dssp -----HH-------------------------------------HHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETT
T ss_pred -----HH-------------------------------------HHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECC
Confidence 00 01122334456666664 6666542 377889
Q ss_pred CCceecccEEEEecCCCCCcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHH
Q 009917 359 QTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRW 436 (522)
Q Consensus 359 G~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ 436 (522)
|++ +++|.||+|||++|+...+. +++..+. ++.+.+..... +.++.||+|++|.+.. +...+.+..|++.
T Consensus 276 G~~-i~~D~vv~a~G~~p~~~~L~------l~~~gl~~~~~G~i~Vd~~-~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~ 347 (495)
T 2wpf_A 276 GKT-LDVDVVMMAIGRIPRTNDLQ------LGNVGVKLTPKGGVQVDEF-SRTNVPNIYAIGDITDRLMLTPVAINEGAA 347 (495)
T ss_dssp SCE-EEESEEEECSCEEECCGGGT------GGGTTCCBCTTSSBCCCTT-CBCSSTTEEECGGGGCSCCCHHHHHHHHHH
T ss_pred CcE-EEcCEEEECCCCcccccccc------hhhcCccCCCCCCEEECCC-CccCCCCEEEEeccCCCccCHHHHHHHHHH
Confidence 987 99999999999999875221 1111110 12233333322 3458999999997654 3356789999999
Q ss_pred HHHHHcCC
Q 009917 437 LAELLDGA 444 (522)
Q Consensus 437 ia~~l~g~ 444 (522)
+|..+.|.
T Consensus 348 aa~~i~g~ 355 (495)
T 2wpf_A 348 LVDTVFGN 355 (495)
T ss_dssp HHHHHHSS
T ss_pred HHHHhcCC
Confidence 99988774
No 40
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.1e-28 Score=253.24 Aligned_cols=305 Identities=15% Similarity=0.162 Sum_probs=185.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce----eecCCCCCCC---CC-CC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDS---VT-TD 72 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~---~~-~~ 72 (522)
++||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+ +.|...+......+ ....+.+... .. ..
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL 89 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccC
Confidence 479999999999999999999999999999997 79999986 44443221111100 0001111000 00 01
Q ss_pred CCChhHHHHHH-----------HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecC
Q 009917 73 FPDHNQVLDYI-----------QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA 141 (522)
Q Consensus 73 ~~~~~~~~~yl-----------~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 141 (522)
......+.++. ....++.++ .+..+ ++..+ + .+.+.|...++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i---~---------------------~~~~~v~~~~g 142 (479)
T 2hqm_A 90 TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKV--DVVFG-WARFN---K---------------------DGNVEVQKRDN 142 (479)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEE-EEEEC---T---------------------TSCEEEEESSS
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEe---e---------------------CCEEEEEeCCC
Confidence 11223333332 233334444 34443 34333 1 12356655443
Q ss_pred CCCceeEEEeCEEEEeecccCCCCCCC-CCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHH
Q 009917 142 KNHSTEVHQVDFVILCVGRFSDVPNIP-EFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAM 220 (522)
Q Consensus 142 ~~g~~~~~~~d~lvvAtG~~s~~p~~P-~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~ 220 (522)
+..++.||+||+|||+ .|..| ++| |.+. ++++.++.. ....+|+|+|||+|.+|+|+|.
T Consensus 143 ---~~~~~~~d~lviAtGs---~p~~p~~i~---g~~~----~~~~~~~~~-------l~~~~~~vvViGgG~ig~E~A~ 202 (479)
T 2hqm_A 143 ---TTEVYSANHILVATGG---KAIFPENIP---GFEL----GTDSDGFFR-------LEEQPKKVVVVGAGYIGIELAG 202 (479)
T ss_dssp ---CCEEEEEEEEEECCCE---EECCCTTST---TGGG----SBCHHHHHH-------CSSCCSEEEEECSSHHHHHHHH
T ss_pred ---cEEEEEeCEEEEcCCC---CCCCCCCCC---Cccc----ccchHHHhc-------ccccCCeEEEECCCHHHHHHHH
Confidence 3347999999999994 57788 788 7642 344443322 1246799999999999999999
Q ss_pred HHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 009917 221 ECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKK 300 (522)
Q Consensus 221 ~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (522)
.|+..+. +||++.|.+. ++|... ..+ ...
T Consensus 203 ~l~~~g~---~Vtlv~~~~~-~l~~~d-------~~~--------------------------------~~~-------- 231 (479)
T 2hqm_A 203 VFHGLGS---ETHLVIRGET-VLRKFD-------ECI--------------------------------QNT-------- 231 (479)
T ss_dssp HHHHTTC---EEEEECSSSS-SCTTSC-------HHH--------------------------------HHH--------
T ss_pred HHHHcCC---ceEEEEeCCc-cccccC-------HHH--------------------------------HHH--------
Confidence 9998765 4999999886 445432 000 000
Q ss_pred ccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC------cEEEcCC-CceecccEEEEec
Q 009917 301 HRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED------GIVVDGQ-TTPLKTDLVILAT 372 (522)
Q Consensus 301 ~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~------gv~~~dG-~~~~~~D~VI~aT 372 (522)
+.+.+++.+|+++.+. +.++..+ .|+++|| ++ +++|.||+||
T Consensus 232 -----------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~-i~~D~vv~a~ 281 (479)
T 2hqm_A 232 -----------------------------ITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSI-DDVDELIWTI 281 (479)
T ss_dssp -----------------------------HHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEE-EEESEEEECS
T ss_pred -----------------------------HHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEE-EEcCEEEECC
Confidence 1112223345566553 5666432 3677888 66 9999999999
Q ss_pred CCCCCccc-ccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCC
Q 009917 373 GFKGDVKL-KNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 373 G~~~~~~l-~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
|++|+..| ++..... . ++.+.+..... +.++.||||++|.+.. +...+.+..|++.+|..+.|.
T Consensus 282 G~~p~~~l~l~~~gl~------~-~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 282 GRKSHLGMGSENVGIK------L-NSHDQIIADEY-QNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp CEEECCCSSGGGGTCC------B-CTTSCBCCCTT-CBCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCccccChhhcCce------E-CCCCCEeECCC-CccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCC
Confidence 99998744 2211100 0 12233333222 3578999999997744 345678999999999988764
No 41
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.95 E-value=8.3e-28 Score=252.51 Aligned_cols=304 Identities=19% Similarity=0.269 Sum_probs=197.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce----eecCCC-CCCCCCCCCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYP-WPDSVTTDFPD 75 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~ 75 (522)
++||+|||||++|+++|..|++.|.+|+|||+++.+||+|.+ +.|...+..+...+ .+..+. ++.. ...+++
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~-~~~~~~ 121 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDM-TEKVVG 121 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCC-TTCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHH-Hhhhhh
Confidence 479999999999999999999999999999999889999876 34433221111100 011111 2211 233445
Q ss_pred hhHHHHHHHH-------HH-----HhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCC
Q 009917 76 HNQVLDYIQS-------YA-----SHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKN 143 (522)
Q Consensus 76 ~~~~~~yl~~-------~~-----~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 143 (522)
..++.+++.. +. ++.++ .+.++.++..++. +.|++. +
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~--------------------------~~v~~~-g-- 170 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNL--EYILNCPAKVIDN--------------------------HTVEAA-G-- 170 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCC--CEEESSCCEEEET--------------------------TEEEET-T--
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCc--EEEEeeEEEEeeC--------------------------CEEEEC-C--
Confidence 7777777653 33 55666 5665667766652 245554 3
Q ss_pred CceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCC-CCchHhhhhccCCCEEEEEcCCCCHHHHHHHH
Q 009917 144 HSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYS-DMDYEAAANLVKGKRVTVVGLQKSALDIAMEC 222 (522)
Q Consensus 144 g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~-~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l 222 (522)
.++.||+||+|||+ .|..|++| |.+. . .++++.++. .. ....+|+|+|||+|.+|+|+|..+
T Consensus 171 ---~~~~~d~lViATGs---~p~~p~i~---G~~~-~-~v~~~~~~~~~l------~~~~g~~vvViGgG~~g~E~A~~l 233 (523)
T 1mo9_A 171 ---KVFKAKNLILAVGA---GPGTLDVP---GVNA-K-GVFDHATLVEEL------DYEPGSTVVVVGGSKTAVEYGCFF 233 (523)
T ss_dssp ---EEEEBSCEEECCCE---ECCCCCST---TTTS-B-TEEEHHHHHHHC------CSCCCSEEEEECCSHHHHHHHHHH
T ss_pred ---EEEEeCEEEECCCC---CCCCCCCC---Cccc-C-cEeeHHHHHHHH------HhcCCCeEEEECCCHHHHHHHHHH
Confidence 57999999999994 57888888 7653 2 256655543 21 123459999999999999999999
Q ss_pred hhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhcc
Q 009917 223 TTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (522)
Q Consensus 223 ~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (522)
+..+. +|+++.|.+. ++|... ..+ ...
T Consensus 234 ~~~G~---~Vtlv~~~~~-~l~~~~-------~~~--------------------------------~~~---------- 260 (523)
T 1mo9_A 234 NATGR---RTVMLVRTEP-LKLIKD-------NET--------------------------------RAY---------- 260 (523)
T ss_dssp HHTTC---EEEEECSSCT-TTTCCS-------HHH--------------------------------HHH----------
T ss_pred HHcCC---eEEEEEecCc-cccccc-------HHH--------------------------------HHH----------
Confidence 98765 4999999876 444321 000 000
Q ss_pred ccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEec--Cc------EEEcCCC-ceecccEEEEec
Q 009917 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DG------IVVDGQT-TPLKTDLVILAT 372 (522)
Q Consensus 303 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~g------v~~~dG~-~~~~~D~VI~aT 372 (522)
+.+.+++.+|+++.+. +.++.. ++ |.+++|+ + +++|.||+||
T Consensus 261 ---------------------------l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~-i~aD~Vv~A~ 312 (523)
T 1mo9_A 261 ---------------------------VLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMR-IETDFVFLGL 312 (523)
T ss_dssp ---------------------------HHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEE-EECSCEEECC
T ss_pred ---------------------------HHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEE-EEcCEEEECc
Confidence 1122333345565553 555543 33 5677887 6 9999999999
Q ss_pred CCCCCcc-cccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCC
Q 009917 373 GFKGDVK-LKNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 373 G~~~~~~-l~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
|++++.. +++....+ . ++.+.+.+.. .+.++.||+|++|.+.. +...+.+..|++.+|..+.|.
T Consensus 313 G~~p~~~~~l~~~gl~------~-~~~G~i~Vd~-~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 378 (523)
T 1mo9_A 313 GEQPRSAELAKILGLD------L-GPKGEVLVNE-YLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGE 378 (523)
T ss_dssp CCEECCHHHHHHHTCC------B-CTTSCBCCCT-TSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTC
T ss_pred CCccCCccCHHHcCCc------c-CCCCCEEECC-CCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCC
Confidence 9999875 33321110 0 1222233322 23458999999997655 345678999999999999874
No 42
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.95 E-value=3.6e-28 Score=252.73 Aligned_cols=307 Identities=14% Similarity=0.149 Sum_probs=190.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce------eecCCCCCCCCCCCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY------QFSDYPWPDSVTTDFP 74 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 74 (522)
++||+|||||++|+++|..|++.|++|+|||+++.+||+|.. +.|...+......+ .+..+.++.. ....
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~--~~~~ 83 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS--EVRL 83 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES--CEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC--CCcc
Confidence 478999999999999999999999999999999899999986 44443221111100 1111111100 0001
Q ss_pred ChhHHHHH-----------HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCC
Q 009917 75 DHNQVLDY-----------IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKN 143 (522)
Q Consensus 75 ~~~~~~~y-----------l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 143 (522)
...++..+ +..+.++.++ .+..++. ..++ . +.+.|++.++
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~-~~~~--~----------------------~~~~v~~~~g-- 134 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKV--VHVNGYG-KITG--K----------------------NQVTATKADG-- 134 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESEE-EEEE--T----------------------TEEEEECTTS--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEE-EEec--C----------------------CEEEEEecCC--
Confidence 12233222 3445556666 5666543 3332 1 2366654431
Q ss_pred CceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHh
Q 009917 144 HSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECT 223 (522)
Q Consensus 144 g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~ 223 (522)
..+++.||+||+|||+ .|..|++| |.+.. .++|+.++..+. ..+|+|+|||+|.+|+|+|..|+
T Consensus 135 -g~~~~~~d~lViAtGs---~p~~p~i~---g~~~~--~v~t~~~~~~~~-------~~~~~vvViGgG~~g~E~A~~l~ 198 (474)
T 1zmd_A 135 -GTQVIDTKNILIATGS---EVTPFPGI---TIDED--TIVSSTGALSLK-------KVPEKMVVIGAGVIGVELGSVWQ 198 (474)
T ss_dssp -CEEEEEEEEEEECCCE---EECCCTTC---CCCSS--SEECHHHHTTCS-------SCCSEEEEECCSHHHHHHHHHHH
T ss_pred -CcEEEEeCEEEECCCC---CCCCCCCC---CCCcC--cEEcHHHHhhcc-------ccCceEEEECCCHHHHHHHHHHH
Confidence 2257999999999995 57778777 65431 367776655432 34799999999999999999999
Q ss_pred hhcCCCCceEEEEcccceeec-CCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhcc
Q 009917 224 TANGLENPCTVLYRTEHWNIP-DYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (522)
Q Consensus 224 ~~~~~~~~Vt~v~r~~~~~~p-~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (522)
+.+. +||++.|++. ++| ... ..+ ...
T Consensus 199 ~~g~---~Vtlv~~~~~-~l~~~~~-------~~~--------------------------------~~~---------- 225 (474)
T 1zmd_A 199 RLGA---DVTAVEFLGH-VGGVGID-------MEI--------------------------------SKN---------- 225 (474)
T ss_dssp HTTC---EEEEECSSSS-SSCSSCC-------HHH--------------------------------HHH----------
T ss_pred HcCC---EEEEEeccCc-cCCcccC-------HHH--------------------------------HHH----------
Confidence 8765 4999999886 455 221 000 000
Q ss_pred ccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC--c-EEE-------cCCCceecccEEEEe
Q 009917 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--G-IVV-------DGQTTPLKTDLVILA 371 (522)
Q Consensus 303 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~--g-v~~-------~dG~~~~~~D~VI~a 371 (522)
+.+.+++.+|+++.+. +.++..+ + +.+ .+|++ +++|.||+|
T Consensus 226 ---------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~-i~~D~vv~a 277 (474)
T 1zmd_A 226 ---------------------------FQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEV-ITCDVLLVC 277 (474)
T ss_dssp ---------------------------HHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEE-EEESEEEEC
T ss_pred ---------------------------HHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceE-EEcCEEEEC
Confidence 1112233345555553 5555432 2 433 34556 999999999
Q ss_pred cCCCCCcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCC
Q 009917 372 TGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 372 TG~~~~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
||++|+..++. +++.... ++.+.+..... +.++.||+|++|.+.. +...+.+..|++.+|..+.|.
T Consensus 278 ~G~~p~~~~l~------l~~~g~~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 278 IGRRPFTKNLG------LEELGIELDPRGRIPVNTR-FQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGG 345 (474)
T ss_dssp SCEEECCTTSS------HHHHTCCCCTTSCCCCCTT-CBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred cCCCcCCCcCC------chhcCCccCCCCCEEECcC-CccCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcCC
Confidence 99999876421 1110010 12232333333 3468999999997654 334678999999999999875
No 43
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.95 E-value=2e-27 Score=247.38 Aligned_cols=308 Identities=12% Similarity=0.103 Sum_probs=193.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce----eecCCCCCCCCCCCCCCh
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDFPDH 76 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (522)
++||+|||||++|+++|..|++.|++|+|||+++.+||+|.. +.|...+......+ .+..+..+.. ......
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~--~~~~~~ 83 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP--EPELDI 83 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC--CCccCH
Confidence 479999999999999999999999999999998899999876 44432211100000 0111111100 011122
Q ss_pred hHHHH-----------HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecC----
Q 009917 77 NQVLD-----------YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA---- 141 (522)
Q Consensus 77 ~~~~~-----------yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---- 141 (522)
..+.. .+...+++.++ .+..++.+. ++ . +.+.|+..++
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~~--~----------------------~~v~v~~~~g~~~~ 136 (482)
T 1ojt_A 84 DMLRAYKDGVVSRLTGGLAGMAKSRKV--DVIQGDGQF-LD--P----------------------HHLEVSLTAGDAYE 136 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEEEEEEE-EE--T----------------------TEEEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEeeEEEE-cc--C----------------------CEEEEEecCCcccc
Confidence 23322 23445566676 666666543 22 1 2356654433
Q ss_pred ---CCCceeEEEeCEEEEeecccCCCCCCCC-CCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHH
Q 009917 142 ---KNHSTEVHQVDFVILCVGRFSDVPNIPE-FPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (522)
Q Consensus 142 ---~~g~~~~~~~d~lvvAtG~~s~~p~~P~-~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~d 217 (522)
.+|+..++.||+||+|||+. |..|+ +| . + ..++++.+..... ..+|+|+|||+|.+|+|
T Consensus 137 ~~~~~g~~~~i~ad~lViAtGs~---p~~~~~i~---~-~---~~v~~~~~~~~~~-------~~~~~vvViGgG~ig~E 199 (482)
T 1ojt_A 137 QAAPTGEKKIVAFKNCIIAAGSR---VTKLPFIP---E-D---PRIIDSSGALALK-------EVPGKLLIIGGGIIGLE 199 (482)
T ss_dssp EEEEEEEEEEEEEEEEEECCCEE---ECCCSSCC---C-C---TTEECHHHHTTCC-------CCCSEEEEESCSHHHHH
T ss_pred cccccCcceEEEcCEEEECCCCC---CCCCCCCC---c-c---CcEEcHHHHhccc-------ccCCeEEEECCCHHHHH
Confidence 12334679999999999964 56665 43 2 1 1366666554421 34899999999999999
Q ss_pred HHHHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHH
Q 009917 218 IAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADI 297 (522)
Q Consensus 218 ia~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (522)
+|..|+..+. +||++.|.+. ++|... .. +..
T Consensus 200 ~A~~l~~~G~---~Vtlv~~~~~-~l~~~~-------~~--------------------------------~~~------ 230 (482)
T 1ojt_A 200 MGTVYSTLGS---RLDVVEMMDG-LMQGAD-------RD--------------------------------LVK------ 230 (482)
T ss_dssp HHHHHHHHTC---EEEEECSSSS-SSTTSC-------HH--------------------------------HHH------
T ss_pred HHHHHHHcCC---eEEEEEECCc-cccccC-------HH--------------------------------HHH------
Confidence 9999998875 4999999887 445432 00 000
Q ss_pred hhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC----cEEEcC----CCceecccEE
Q 009917 298 KKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVDG----QTTPLKTDLV 368 (522)
Q Consensus 298 ~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----gv~~~d----G~~~~~~D~V 368 (522)
.+.+.+++.+|+++.+. +.++..+ .|+++| |++ +++|.|
T Consensus 231 -------------------------------~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~-~~~D~v 278 (482)
T 1ojt_A 231 -------------------------------VWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEP-QRYDAV 278 (482)
T ss_dssp -------------------------------HHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSC-EEESCE
T ss_pred -------------------------------HHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceE-EEcCEE
Confidence 11123445567777765 6777543 267777 777 899999
Q ss_pred EEecCCCCCcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCC
Q 009917 369 ILATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 369 I~aTG~~~~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
|+|||++|+..++. +++.... ++.+.+.... .+.++.||+|++|.+.. +...+.+..|++.+|..+.|.
T Consensus 279 v~a~G~~p~~~~l~------~~~~gl~~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 349 (482)
T 1ojt_A 279 LVAAGRAPNGKLIS------AEKAGVAVTDRGFIEVDK-QMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGH 349 (482)
T ss_dssp EECCCEEECGGGTT------GGGTTCCCCTTSCCCCCT-TSBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTC
T ss_pred EECcCCCcCCCCCC------hhhcCceeCCCCCEeeCC-CcccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCC
Confidence 99999999976521 1111111 1223233333 24468999999997654 344678999999999999875
No 44
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.95 E-value=2e-28 Score=245.68 Aligned_cols=283 Identities=16% Similarity=0.168 Sum_probs=186.3
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
.||+|||||+||+++|..|++.| +|+|||+++..+ |.. +.+ +.. ... ....+++..+.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~--~~l----~~~---~~g----------~~~~~~~~~~~ 66 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSK--PML----SHY---IAG----------FIPRNRLFPYS 66 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCS--TTH----HHH---HTT----------SSCGGGGCSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--ccc--chh----HHH---HhC----------CCCHHHhccCC
Confidence 58999999999999999999999 999999987542 111 000 000 000 01112222233
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccCC
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~ 163 (522)
.++.+++++ .+.++++|+.++... +.|+ .++ +++.||+||+|||+
T Consensus 67 ~~~~~~~~v--~~~~g~~v~~id~~~------------------------~~V~-~~g-----~~~~~d~lViATGs--- 111 (367)
T 1xhc_A 67 LDWYRKRGI--EIRLAEEAKLIDRGR------------------------KVVI-TEK-----GEVPYDTLVLATGA--- 111 (367)
T ss_dssp HHHHHHHTE--EEECSCCEEEEETTT------------------------TEEE-ESS-----CEEECSEEEECCCE---
T ss_pred HHHHHhCCc--EEEECCEEEEEECCC------------------------CEEE-ECC-----cEEECCEEEECCCC---
Confidence 444566777 788888899988653 5676 554 57999999999994
Q ss_pred CCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccceee
Q 009917 164 VPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNI 243 (522)
Q Consensus 164 ~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~~ 243 (522)
.|+.|++| |.+ .+++...+.+.... ......+++|+|||+|.+|+|+|..|++.+. +||++.|.+. ++
T Consensus 112 ~p~~p~i~---G~~----~v~~~~~~~~~~~l-~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~-~l 179 (367)
T 1xhc_A 112 RAREPQIK---GKE----YLLTLRTIFDADRI-KESIENSGEAIIIGGGFIGLELAGNLAEAGY---HVKLIHRGAM-FL 179 (367)
T ss_dssp EECCCCSB---TGG----GEECCCSHHHHHHH-HHHHHHHSEEEEEECSHHHHHHHHHHHHTTC---EEEEECSSSC-CT
T ss_pred CCCCCCCC---CcC----CEEEEcCHHHHHHH-HHHhhcCCcEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCCe-ec
Confidence 57888888 622 25554443321100 0011146999999999999999999998865 4999999876 44
Q ss_pred cCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccce
Q 009917 244 PDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLT 323 (522)
Q Consensus 244 p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 323 (522)
| .. ..+ .+
T Consensus 180 ~-~~-------~~~--------------------------------~~-------------------------------- 187 (367)
T 1xhc_A 180 G-LD-------EEL--------------------------------SN-------------------------------- 187 (367)
T ss_dssp T-CC-------HHH--------------------------------HH--------------------------------
T ss_pred c-CC-------HHH--------------------------------HH--------------------------------
Confidence 4 21 000 00
Q ss_pred eccCCcccccccCCcEEEeecC-ceeEecCcEEEcCCCceecccEEEEecCCCCCcccccccccccccccccCCCCCCcc
Q 009917 324 ITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLP 402 (522)
Q Consensus 324 ~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 402 (522)
.+.+.+++.+|+++.+. +.+++.++|+++||+ +++|.||+|||++|+..+++... .... +.+.
T Consensus 188 -----~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~--i~~D~vi~a~G~~p~~~ll~~~g--------l~~~-~gi~ 251 (367)
T 1xhc_A 188 -----MIKDMLEETGVKFFLNSELLEANEEGVLTNSGF--IEGKVKICAIGIVPNVDLARRSG--------IHTG-RGIL 251 (367)
T ss_dssp -----HHHHHHHHTTEEEECSCCEEEECSSEEEETTEE--EECSCEEEECCEEECCHHHHHTT--------CCBS-SSEE
T ss_pred -----HHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE--EEcCEEEECcCCCcCHHHHHhCC--------CCCC-CCEE
Confidence 01123444567787764 778877789998885 89999999999999876533221 1111 1222
Q ss_pred cceeecCCCCCceEEEcccCC-----cchhhhHHHHHHHHHHHHcCC
Q 009917 403 LYREIIHPQIPQLAIIGFSES-----ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 403 ly~~~~~~~~pnl~~iG~~~~-----~~~~~~~e~qa~~ia~~l~g~ 444 (522)
... .+.++.||+|++|.+.. ....+.+..|++.+|..+.|.
T Consensus 252 Vd~-~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 252 IDD-NFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp CCT-TSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred ECC-CcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 222 23457899999996632 234678999999999999875
No 45
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.95 E-value=4e-27 Score=231.34 Aligned_cols=171 Identities=20% Similarity=0.247 Sum_probs=123.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
+||+||||||||++||..|++.|++|+|||+. .+||++.. +.+ .++. .......++..
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~~i~-----------~~p~--------~~~~~~~~~~~ 66 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTEEVE-----------NFPG--------FEMITGPDLST 66 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBC-----------CSTT--------CSSBCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeecccccC-----------CcCC--------ccccchHHHHH
Confidence 79999999999999999999999999999985 68888765 211 1111 11234566666
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.......++.. .+..+..+....... ..+...++ .++.||+||+|||+
T Consensus 67 ~~~~~~~~~~~--~~~~~~~~~~~~~~~------------------------~~~~~~~~-----~~~~~d~liiAtGs- 114 (312)
T 4gcm_A 67 KMFEHAKKFGA--VYQYGDIKSVEDKGE------------------------YKVINFGN-----KELTAKAVIIATGA- 114 (312)
T ss_dssp HHHHHHHHTTC--EEEECCCCEEEECSS------------------------CEEEECSS-----CEEEEEEEEECCCE-
T ss_pred HHHHHHhhccc--cccceeeeeeeeeec------------------------ceeeccCC-----eEEEeceeEEcccC-
Confidence 66666666654 445544444433322 12333333 57999999999994
Q ss_pred CCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.|+.|++| |.+.+.+..+++....+ ...+++|+|+|||+|.+|+|+|..|++.+. +||++.|++.
T Consensus 115 --~~~~~~ip---G~~~~~~~~v~~~~~~~------~~~~~~k~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~ 179 (312)
T 4gcm_A 115 --EYKKIGVP---GEQELGGRGVSYCAVCD------GAFFKNKRLFVIGGGDSAVEEGTFLTKFAD---KVTIVHRRDE 179 (312)
T ss_dssp --EECCCCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHTTTCS---EEEEECSSSS
T ss_pred --ccCcCCCC---ChhhhCCccEEeeeccC------ccccCCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEecccc
Confidence 57888888 88877776666544432 345789999999999999999999998775 4999999876
No 46
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.95 E-value=1.6e-27 Score=249.24 Aligned_cols=312 Identities=16% Similarity=0.120 Sum_probs=192.8
Q ss_pred CcEEEECCChhHHHHHHHHHhc---CCceEEEecCCCccccccc--cccceeecCCccce----eecCCCCCCCCCCCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK---GFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDFP 74 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~---g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 74 (522)
+||+|||||++|+++|..|++. |++|+|||+++ +||+|.. +.|...+..+...+ .+..+.++........
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 7999999999999999999998 99999999988 9999876 44432221111110 1111111100000111
Q ss_pred ChhHHH-----------HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCC
Q 009917 75 DHNQVL-----------DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKN 143 (522)
Q Consensus 75 ~~~~~~-----------~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 143 (522)
....+. .++..+++++++ .+..++ +..++..... .++.+.|...+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~-~~~i~~~~~~------------------~~~~~~V~~~~--- 137 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGV--QVIAGR-GELIDSTPGL------------------ARHRIKATAAD--- 137 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESE-EEECCSSSCC------------------SSEEEEEECTT---
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEecCcccC------------------CCCEEEEEeCC---
Confidence 223332 334566667777 666664 5555431000 01224444333
Q ss_pred CceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHh
Q 009917 144 HSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECT 223 (522)
Q Consensus 144 g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~ 223 (522)
++..++.||+||+|||+ .|..|++| |.+.. .++++.+.... ...+++|+|||+|.+|+|+|..++
T Consensus 138 g~~~~~~~d~lviATGs---~p~~p~i~---g~~~~--~v~~~~~~~~~-------~~~~~~vvViGgG~ig~E~A~~l~ 202 (499)
T 1xdi_A 138 GSTSEHEADVVLVATGA---SPRILPSA---QPDGE--RILTWRQLYDL-------DALPDHLIVVGSGVTGAEFVDAYT 202 (499)
T ss_dssp SCEEEEEESEEEECCCE---EECCCGGG---CCCSS--SEEEGGGGGGC-------SSCCSSEEEESCSHHHHHHHHHHH
T ss_pred CcEEEEEeCEEEEcCCC---CCCCCCCC---CCCcC--cEEehhHhhhh-------hccCCeEEEECCCHHHHHHHHHHH
Confidence 32247999999999994 57788777 65532 25665555432 235799999999999999999999
Q ss_pred hhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccc
Q 009917 224 TANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (522)
Q Consensus 224 ~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (522)
..+.+ |+++.|.+. ++|... ..+ ..
T Consensus 203 ~~g~~---Vtlv~~~~~-~l~~~d-------~~~--------------------------------~~------------ 227 (499)
T 1xdi_A 203 ELGVP---VTVVASQDH-VLPYED-------ADA--------------------------------AL------------ 227 (499)
T ss_dssp HTTCC---EEEECSSSS-SSCCSS-------HHH--------------------------------HH------------
T ss_pred HcCCe---EEEEEcCCc-cccccC-------HHH--------------------------------HH------------
Confidence 88754 999999886 455432 000 00
Q ss_pred cccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCc----EEEcCCCceecccEEEEecCCCCCc
Q 009917 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVDGQTTPLKTDLVILATGFKGDV 378 (522)
Q Consensus 304 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g----v~~~dG~~~~~~D~VI~aTG~~~~~ 378 (522)
.+.+.+++.+|+++.+. +.++..++ |.+.+|++ +++|.||+|+|++++.
T Consensus 228 -------------------------~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~-i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 228 -------------------------VLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRT-VEGSHALMTIGSVPNT 281 (499)
T ss_dssp -------------------------HHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCE-EEESEEEECCCEEECC
T ss_pred -------------------------HHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcE-EEcCEEEECCCCCcCC
Confidence 01122333456666553 66665432 45567877 9999999999999987
Q ss_pred ccc--cccccccccccccCCCCCCcccceeecCCCCCceEEEcccCCc-chhhhHHHHHHHHHHHHcCC
Q 009917 379 KLK--NIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSESI-SNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 379 ~l~--~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~ia~~l~g~ 444 (522)
.++ +.... .-+..+.+.+... +.++.||||++|.+... ...+.+..|++.+|..+.|.
T Consensus 282 ~~l~l~~~gl-------~~~~~G~i~Vd~~-~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 282 SGLGLERVGI-------QLGRGNYLTVDRV-SRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp SSSCTTTTTC-------CCBTTTBCCCCSS-SBCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTTC
T ss_pred CcCCchhcCc-------eECCCCCEEECCC-cccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 652 21110 0011222333333 44689999999976543 34578999999999999886
No 47
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.95 E-value=3e-27 Score=246.49 Aligned_cols=297 Identities=20% Similarity=0.229 Sum_probs=189.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcC---CceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKG---FHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQV 79 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g---~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (522)
+++|+|||||++|+++|..|++.| .+|+|||+++.++..+.. .+ .+...... ..+++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-~~-----------~~~~~~~~--------~~~~~ 94 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-MA-----------LWIGEQIA--------GPEGL 94 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-HH-----------HHHTTSSS--------CSGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-cc-----------hhhcCccC--------CHHHh
Confidence 479999999999999999999987 999999998876532211 00 00000000 00111
Q ss_pred HHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEe-cCCCCceeEEEeCEEEEee
Q 009917 80 LDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVE-DAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 80 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~g~~~~~~~d~lvvAt 158 (522)
..++...++++++ .++++++|+.++... + .|++. + +...++.||+||+||
T Consensus 95 ~~~~~~~~~~~gv--~v~~~~~v~~i~~~~----------------------~--~v~v~~~---g~~~~~~~d~lviAt 145 (490)
T 2bc0_A 95 FYSDKEELESLGA--KVYMESPVQSIDYDA----------------------K--TVTALVD---GKNHVETYDKLIFAT 145 (490)
T ss_dssp BSCCHHHHHHTTC--EEETTCCEEEEETTT----------------------T--EEEEEET---TEEEEEECSEEEECC
T ss_pred hhcCHHHHHhCCC--EEEeCCEEEEEECCC----------------------C--EEEEEeC---CcEEEEECCEEEECC
Confidence 1112233456677 788899999998654 2 34444 3 223579999999999
Q ss_pred cccCCCCCCCCCCCCCCCC------ccCc---eEEeeccCCCCchHhhhhc--cCCCEEEEEcCCCCHHHHHHHHhhhcC
Q 009917 159 GRFSDVPNIPEFPPKKGPE------AFHG---KVIHSMDYSDMDYEAAANL--VKGKRVTVVGLQKSALDIAMECTTANG 227 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~------~f~g---~~~hs~~~~~~~~~~~~~~--~~gk~VvVIG~G~sg~dia~~l~~~~~ 227 (522)
|+ .|..|++| |.+ .|.+ .++++..+.+.... .... ..+|+|+|||+|.+|+|+|..|++.+.
T Consensus 146 G~---~p~~p~i~---G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~ 218 (490)
T 2bc0_A 146 GS---QPILPPIK---GAEIKEGSLEFEATLENLQFVKLYQNSADV-IAKLENKDIKRVAVVGAGYIGVELAEAFQRKGK 218 (490)
T ss_dssp CE---EECCCSCB---TCCBCTTCTTCCBSSTTEEECSSHHHHHHH-HHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CC---CcCCCCCC---CccccccccccccccCCEEEeCCHHHHHHH-HHHhhhcCCceEEEECCCHHHHHHHHHHHHCCC
Confidence 94 57888888 765 4432 36665544332110 0112 578999999999999999999998765
Q ss_pred CCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccC
Q 009917 228 LENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFG 307 (522)
Q Consensus 228 ~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (522)
+||++.|++. ++|+.. +..+ .
T Consensus 219 ---~Vtlv~~~~~-~l~~~~------~~~~--------------------------------~----------------- 239 (490)
T 2bc0_A 219 ---EVVLIDVVDT-CLAGYY------DRDL--------------------------------T----------------- 239 (490)
T ss_dssp ---EEEEEESSSS-TTTTTS------CHHH--------------------------------H-----------------
T ss_pred ---eEEEEEcccc-hhhhHH------HHHH--------------------------------H-----------------
Confidence 4999999886 444211 0000 0
Q ss_pred CCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCc----EEEcCCCceecccEEEEecCCCCCccccc
Q 009917 308 MVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVDGQTTPLKTDLVILATGFKGDVKLKN 382 (522)
Q Consensus 308 l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g----v~~~dG~~~~~~D~VI~aTG~~~~~~l~~ 382 (522)
+.+.+.+++.+|+++.+. +.++..++ |.+ ||++ +++|.||+|||++++.++++
T Consensus 240 --------------------~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~-i~~D~Vi~a~G~~p~~~ll~ 297 (490)
T 2bc0_A 240 --------------------DLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNE-YDVDMVILAVGFRPNTTLGN 297 (490)
T ss_dssp --------------------HHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCE-EECSEEEECCCEEECCGGGT
T ss_pred --------------------HHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcE-EECCEEEECCCCCcChHHHH
Confidence 011123444566777664 66776543 444 7777 99999999999999976543
Q ss_pred ccccccccccccCCCCCCcccceeecCCCCCceEEEcccCCc-----------chhhhHHHHHHHHHHHHcCCC
Q 009917 383 IFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSESI-----------SNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 383 ~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~ia~~l~g~~ 445 (522)
.. +. . ++.+.+.... .+.++.||||++|.+... .....+..|++.+|..+.|..
T Consensus 298 ~~----l~---~-~~~G~I~Vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 362 (490)
T 2bc0_A 298 GK----ID---L-FRNGAFLVNK-RQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362 (490)
T ss_dssp TC----SC---B-CTTSCBCCCT-TCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred hh----hc---c-CCCCCEEECC-CcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 21 10 0 1223233332 234589999999966542 245679999999999998753
No 48
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.95 E-value=6.4e-28 Score=250.40 Aligned_cols=308 Identities=15% Similarity=0.137 Sum_probs=189.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCcccee-----ecCCCCCCCCCCCCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQ-----FSDYPWPDSVTTDFPD 75 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 75 (522)
++||+|||||++|+++|..|++.|++|+|||+++.+||+|.. +.|...+......+. +..+.++.. ......
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 80 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGG-EGVTMD 80 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECG-GGCEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccC-CCCccC
Confidence 379999999999999999999999999999999899999986 444332211110000 000001000 000011
Q ss_pred hhHH-----------HHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCC
Q 009917 76 HNQV-----------LDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNH 144 (522)
Q Consensus 76 ~~~~-----------~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g 144 (522)
..++ ...+..++++.++ .+..++.+ .++. +.+.|...+ |
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~~-~i~~------------------------~~~~v~~~~---G 130 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLFKKNKV--TYYKGEGS-FETA------------------------HSIRVNGLD---G 130 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEEEE-EEET------------------------TEEEEEETT---S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEE-EeeC------------------------CEEEEEecC---C
Confidence 1222 2233455666677 66666543 3432 235565433 3
Q ss_pred ceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhh
Q 009917 145 STEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTT 224 (522)
Q Consensus 145 ~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~ 224 (522)
+.+++.||+||+|||+ .|..|+++ |.+. . .++++.++... ...+++|+|||+|.+|+|+|..++.
T Consensus 131 ~~~~~~~d~lviAtG~---~p~~p~~~---g~~~-~-~v~t~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l~~ 195 (468)
T 2qae_A 131 KQEMLETKKTIIATGS---EPTELPFL---PFDE-K-VVLSSTGALAL-------PRVPKTMVVIGGGVIGLELGSVWAR 195 (468)
T ss_dssp CEEEEEEEEEEECCCE---EECCBTTB---CCCS-S-SEECHHHHHTC-------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred ceEEEEcCEEEECCCC---CcCCCCCC---CCCc-C-ceechHHHhhc-------ccCCceEEEECCCHHHHHHHHHHHH
Confidence 3457999999999995 57777777 6543 1 35665554432 1357999999999999999999998
Q ss_pred hcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhcccc
Q 009917 225 ANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLA 304 (522)
Q Consensus 225 ~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (522)
.+. +||++.|.+. ++|..+ .. ....
T Consensus 196 ~g~---~Vtlv~~~~~-~l~~~d-------~~--------------------------------~~~~------------ 220 (468)
T 2qae_A 196 LGA---EVTVVEFAPR-CAPTLD-------ED--------------------------------VTNA------------ 220 (468)
T ss_dssp TTC---EEEEECSSSS-SSTTSC-------HH--------------------------------HHHH------------
T ss_pred hCC---EEEEEecCCc-ccccCC-------HH--------------------------------HHHH------------
Confidence 765 4999999886 555432 00 0000
Q ss_pred ccCCCCCCcccccccccceeccCCcccccc-cCCcEEEeecC-ceeEecCc----EEEc--CC--CceecccEEEEecCC
Q 009917 305 KFGMVPKHSFLQELSSCLTITVPEKFYDKV-EEGSIILKKSQ-DFSFCEDG----IVVD--GQ--TTPLKTDLVILATGF 374 (522)
Q Consensus 305 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l-~~g~v~v~~~~-i~~~~~~g----v~~~--dG--~~~~~~D~VI~aTG~ 374 (522)
+.+.+ ++.+|+++.+. +.++..++ +.++ +| ++ +++|.||+|||+
T Consensus 221 -------------------------l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~-i~~D~vv~a~G~ 274 (468)
T 2qae_A 221 -------------------------LVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRET-VTCEALLVSVGR 274 (468)
T ss_dssp -------------------------HHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEE-EEESEEEECSCE
T ss_pred -------------------------HHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEE-EECCEEEECCCc
Confidence 11223 33455666554 66665432 4554 67 45 899999999999
Q ss_pred CCCcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC--cchhhhHHHHHHHHHHHHcCC
Q 009917 375 KGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES--ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 375 ~~~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~--~~~~~~~e~qa~~ia~~l~g~ 444 (522)
+++..++. +++.... ++.+.+..... +.++.||+|++|.+.. +...+.+..|++.+|..+.|+
T Consensus 275 ~p~~~~l~------l~~~gl~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 340 (468)
T 2qae_A 275 RPFTGGLG------LDKINVAKNERGFVKIGDH-FETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGK 340 (468)
T ss_dssp EECCTTSC------HHHHTCCBCTTSCBCCCTT-SBCSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCCC------chhcCCccCCCCCEeECCC-cccCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcCC
Confidence 99876521 0110010 11222333332 3468999999997655 445678999999999999875
No 49
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.94 E-value=1.2e-27 Score=247.49 Aligned_cols=301 Identities=16% Similarity=0.179 Sum_probs=186.1
Q ss_pred CC-CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce----eecCCCCCCCCCCCC
Q 009917 1 ME-KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDF 73 (522)
Q Consensus 1 m~-~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 73 (522)
|. ++||+|||||++|+++|..|++.|++|+|||++ .+||+|.+ +.|...+......+ ....+.+.. ....
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~--~~~~ 77 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQA--SGGT 77 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCC--C---
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCccc--CCCC
Confidence 54 579999999999999999999999999999997 78999986 44543221111100 111111111 0111
Q ss_pred CChhHHHHHHHHH-----------HHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCC
Q 009917 74 PDHNQVLDYIQSY-----------ASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK 142 (522)
Q Consensus 74 ~~~~~~~~yl~~~-----------~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 142 (522)
....++.++.+.+ .++.++ .+..+ ++..++ . +.|++ ++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~--~------------------------~~v~~-~g- 126 (463)
T 2r9z_A 78 LDWPRLVAGRDRYIGAINSFWDGYVERLGI--TRVDG-HARFVD--A------------------------HTIEV-EG- 126 (463)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEEE--T------------------------TEEEE-TT-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEe-EEEEcc--C------------------------CEEEE-CC-
Confidence 2233444443333 233444 34333 333332 1 35666 43
Q ss_pred CCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHH
Q 009917 143 NHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMEC 222 (522)
Q Consensus 143 ~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l 222 (522)
.++.||+||+|||+ .|..|++| |.+. ++++.++... ...+++|+|||+|.+|+|+|..|
T Consensus 127 ----~~~~~d~lviAtGs---~p~~p~i~---G~~~----~~~~~~~~~~-------~~~~~~vvVvGgG~~g~e~A~~l 185 (463)
T 2r9z_A 127 ----QRLSADHIVIATGG---RPIVPRLP---GAEL----GITSDGFFAL-------QQQPKRVAIIGAGYIGIELAGLL 185 (463)
T ss_dssp ----EEEEEEEEEECCCE---EECCCSCT---TGGG----SBCHHHHHHC-------SSCCSEEEEECCSHHHHHHHHHH
T ss_pred ----EEEEcCEEEECCCC---CCCCCCCC---Cccc----eecHHHHhhh-------hccCCEEEEECCCHHHHHHHHHH
Confidence 57999999999994 57788888 7632 3444443221 23579999999999999999999
Q ss_pred hhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhcc
Q 009917 223 TTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (522)
Q Consensus 223 ~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (522)
++.+. +|+++.|++. +++... ..+. ..
T Consensus 186 ~~~G~---~Vtlv~~~~~-~l~~~~-------~~~~--------------------------------~~---------- 212 (463)
T 2r9z_A 186 RSFGS---EVTVVALEDR-LLFQFD-------PLLS--------------------------------AT---------- 212 (463)
T ss_dssp HHTTC---EEEEECSSSS-SSTTSC-------HHHH--------------------------------HH----------
T ss_pred HhcCC---EEEEEEcCCc-cccccC-------HHHH--------------------------------HH----------
Confidence 98765 4999999876 334321 0000 00
Q ss_pred ccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC----cEEEcCCC-ceecccEEEEecCCCC
Q 009917 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVDGQT-TPLKTDLVILATGFKG 376 (522)
Q Consensus 303 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----gv~~~dG~-~~~~~D~VI~aTG~~~ 376 (522)
+.+.+++.+|+++.+. +.++..+ .|+++||+ + +++|.||+|||++|
T Consensus 213 ---------------------------l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~-i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 213 ---------------------------LAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRL-EGFDSVIWAVGRAP 264 (463)
T ss_dssp ---------------------------HHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEE-EEESEEEECSCEEE
T ss_pred ---------------------------HHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEE-EEcCEEEECCCCCc
Confidence 1122333456666654 6666532 47788998 7 99999999999999
Q ss_pred Cccccccccccccccccc-CCCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCC
Q 009917 377 DVKLKNIFLSQTFQDYLA-GSPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 377 ~~~l~~~~~~~~l~~~~~-~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
+...+. +++... -++.+.+..... +.++.||+|++|.+.. +...+.+..|++.++..+.|.
T Consensus 265 ~~~~l~------~~~~g~~~~~~G~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 327 (463)
T 2r9z_A 265 NTRDLG------LEAAGIEVQSNGMVPTDAY-QNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFDG 327 (463)
T ss_dssp SCTTSC------HHHHTCCCCTTSCCCCCTT-SBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCC------chhcCCccCCCCCEeECCC-CccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCC
Confidence 865211 011001 012232333332 3578999999997654 345678899999999988764
No 50
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.94 E-value=7.8e-28 Score=249.48 Aligned_cols=305 Identities=14% Similarity=0.143 Sum_probs=188.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce-----eecCCCCCCCCCCCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY-----QFSDYPWPDSVTTDF 73 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 73 (522)
|.++||+|||||++|+++|..|++.|++|+|||++ .+||+|.. +.|...+......+ .+..+.++. .. .
T Consensus 1 M~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~--~~-~ 76 (464)
T 2a8x_A 1 MTHYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISG--EV-T 76 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEE--CC-E
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCC--CC-c
Confidence 66689999999999999999999999999999998 78998875 34432221110000 001111100 00 0
Q ss_pred CChh-----------HHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCC
Q 009917 74 PDHN-----------QVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK 142 (522)
Q Consensus 74 ~~~~-----------~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 142 (522)
.... .+.+++.+.+++.++ .+..++.+. + + .+.+.|.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv--~~~~g~~~~-i---d---------------------~~~v~V~~~~-- 127 (464)
T 2a8x_A 77 FDYGIAYDRSRKVAEGRVAGVHFLMKKNKI--TEIHGYGTF-A---D---------------------ANTLLVDLND-- 127 (464)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECEEEEE-S---S---------------------SSEEEEEETT--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE-e---c---------------------CCeEEEEeCC--
Confidence 0111 223345566666777 676666543 2 2 1336665543
Q ss_pred CCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHH
Q 009917 143 NHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMEC 222 (522)
Q Consensus 143 ~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l 222 (522)
|+.+++.||+||+|||+. |..|+++ |.+. .++++.+.... ...+|+|+|||+|.+|+|+|..|
T Consensus 128 -G~~~~~~~d~lViAtG~~---~~~~~~~---g~~~---~~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l 190 (464)
T 2a8x_A 128 -GGTESVTFDNAIIATGSS---TRLVPGT---SLSA---NVVTYEEQILS-------RELPKSIIIAGAGAIGMEFGYVL 190 (464)
T ss_dssp -SCCEEEEEEEEEECCCEE---ECCCTTC---CCBT---TEECHHHHHTC-------SSCCSEEEEECCSHHHHHHHHHH
T ss_pred -CceEEEEcCEEEECCCCC---CCCCCCC---CCCc---eEEecHHHhhc-------cccCCeEEEECCcHHHHHHHHHH
Confidence 333579999999999954 6777777 6543 25565544332 13579999999999999999999
Q ss_pred hhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhcc
Q 009917 223 TTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (522)
Q Consensus 223 ~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (522)
+..+. +||++.|.+. ++|... ..+ ...+
T Consensus 191 ~~~g~---~Vtlv~~~~~-~l~~~~-------~~~--------------------------------~~~l--------- 218 (464)
T 2a8x_A 191 KNYGV---DVTIVEFLPR-ALPNED-------ADV--------------------------------SKEI--------- 218 (464)
T ss_dssp HHTTC---EEEEECSSSS-SSTTSC-------HHH--------------------------------HHHH---------
T ss_pred HHcCC---eEEEEEcCCc-cccccC-------HHH--------------------------------HHHH---------
Confidence 98765 4999999886 555432 000 0000
Q ss_pred ccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCc----EEEc-CC--CceecccEEEEecCC
Q 009917 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVD-GQ--TTPLKTDLVILATGF 374 (522)
Q Consensus 303 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g----v~~~-dG--~~~~~~D~VI~aTG~ 374 (522)
.+.+++.+|+++.+. +.++..++ +.++ +| ++ +++|.||+|||+
T Consensus 219 ----------------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~-~~~D~vv~a~G~ 269 (464)
T 2a8x_A 219 ----------------------------EKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQE-LKAEKVLQAIGF 269 (464)
T ss_dssp ----------------------------HHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEE-EEESEEEECSCE
T ss_pred ----------------------------HHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEE-EEcCEEEECCCC
Confidence 111222345555553 55665432 3444 66 45 899999999999
Q ss_pred CCCcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcC
Q 009917 375 KGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDG 443 (522)
Q Consensus 375 ~~~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g 443 (522)
+|+..++. +++.... ++.+.+..... +.++.||+|++|.+.. +...+.+..|++.+|..+.|
T Consensus 270 ~p~~~~l~------~~~~gl~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 270 APNVEGYG------LDKAGVALTDRKAIGVDDY-MRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp EECCSSSC------HHHHTCCBCTTSSBCCCTT-SBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCC------chhcCCccCCCCCEeECcC-CccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 99876521 1110010 12233333333 3468999999997654 33467889999999999987
No 51
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.94 E-value=9.2e-27 Score=228.87 Aligned_cols=184 Identities=18% Similarity=0.322 Sum_probs=129.9
Q ss_pred CCC-CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc-cccceeecCCccceeecCCCCCCCCCCCCCChhH
Q 009917 1 MEK-KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (522)
Q Consensus 1 m~~-~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (522)
|.. +||+||||||||++||..|++.|++|+|||+. ..||.+.. +.+.. ..++.+..+ +......+
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~-~~gg~~~~G~~~~~-----~~i~~~~g~-------~~~i~~~~ 67 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGF-MAGGVAAGGQLTTT-----TIIENFPGF-------PNGIDGNE 67 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS-SGGGCCTTCGGGGS-----SEECCSTTC-------TTCEEHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCcccCCCcCCh-----HHhhhccCC-------cccCCHHH
Confidence 665 79999999999999999999999999999986 45665544 22111 111122111 22335678
Q ss_pred HHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 79 ~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
+.+++...+++++. .+. ...|..+.... ....+.+.++ .++.||+||+||
T Consensus 68 l~~~~~~~~~~~~~--~~~-~~~v~~~~~~~----------------------~~~~~~~~~~-----~~~~~~~liiAT 117 (314)
T 4a5l_A 68 LMMNMRTQSEKYGT--TII-TETIDHVDFST----------------------QPFKLFTEEG-----KEVLTKSVIIAT 117 (314)
T ss_dssp HHHHHHHHHHHTTC--EEE-CCCEEEEECSS----------------------SSEEEEETTC-----CEEEEEEEEECC
T ss_pred HHHHHHHHHhhcCc--EEE-EeEEEEeecCC----------------------CceEEEECCC-----eEEEEeEEEEcc
Confidence 88889999988876 343 34555555433 2345555544 689999999999
Q ss_pred cccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcc
Q 009917 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~ 238 (522)
|+ .|+.|++| |.+.+.+..++...+.... ...+++|+|+|||+|.+|+|+|..|++.+. +||++.|.
T Consensus 118 G~---~~~~~~ip---G~~~~~~~~~~~~~~~~~~----~~~~~~~~vvViGgG~ig~e~A~~l~~~G~---~Vt~v~~~ 184 (314)
T 4a5l_A 118 GA---TAKRMHVP---GEDKYWQNGVSACAICDGA----VPIFRNKVLMVVGGGDAAMEEALHLTKYGS---KVIILHRR 184 (314)
T ss_dssp CE---EECCCCCT---THHHHBTTTEESCHHHHTT----SGGGTTSEEEEECSSHHHHHHHHHHTTTSS---EEEEECSS
T ss_pred cc---cccccCCC---ccccccccceeeehhhhhh----hhhcCCCeEEEECCChHHHHHHHHHHHhCC---eeeeeccc
Confidence 94 57888888 8776655555555443211 234679999999999999999999999875 49999987
Q ss_pred cc
Q 009917 239 EH 240 (522)
Q Consensus 239 ~~ 240 (522)
+.
T Consensus 185 ~~ 186 (314)
T 4a5l_A 185 DA 186 (314)
T ss_dssp SS
T ss_pred cc
Confidence 65
No 52
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.94 E-value=5.4e-27 Score=238.82 Aligned_cols=288 Identities=14% Similarity=0.115 Sum_probs=186.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC--ceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
+++|+|||||++|+++|..|++.|. +|+|||+++.++.. . +..+..+.. ... ++ ..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~--~------~~~~~~~~~-~~~--~~---~~-------- 64 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYD--R------PPLSKDFMA-HGD--AE---KI-------- 64 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBC--S------GGGGTHHHH-HCC--GG---GS--------
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCccc--C------CCCCHHHhC-CCc--hh---hh--------
Confidence 4789999999999999999999987 49999998764311 0 000000000 000 00 00
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
+++ .++++++ .++++++|+.++... ++|++.++ +++.||+||+|||+
T Consensus 65 -~~~-~~~~~~v--~~~~~~~v~~i~~~~------------------------~~v~~~~g-----~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 65 -RLD-CKRAPEV--EWLLGVTAQSFDPQA------------------------HTVALSDG-----RTLPYGTLVLATGA 111 (408)
T ss_dssp -BCC-CTTSCSC--EEEETCCEEEEETTT------------------------TEEEETTS-----CEEECSEEEECCCE
T ss_pred -hHH-HHHHCCC--EEEcCCEEEEEECCC------------------------CEEEECCC-----CEEECCEEEECCCC
Confidence 011 2345566 778888899988653 67887665 47999999999995
Q ss_pred cCCCCCCCCC-CCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 161 FSDVPNIPEF-PPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 161 ~s~~p~~P~~-p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
.|+.|++ | |.+ .+ +++.....+... .......+|+|+|||+|.+|+|+|..|++.+. +||++.|.+
T Consensus 112 ---~~~~~~i~~---G~~--~~-v~~~~~~~~~~~-l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~ 178 (408)
T 2gqw_A 112 ---APRALPTLQ---GAT--MP-VHTLRTLEDARR-IQAGLRPQSRLLIVGGGVIGLELAATARTAGV---HVSLVETQP 178 (408)
T ss_dssp ---EECCCGGGT---TCS--SC-EEECCSHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSS
T ss_pred ---CCCCCCccC---CCC--Cc-EEEECCHHHHHH-HHHHhhcCCeEEEECCCHHHHHHHHHHHhCCC---EEEEEEeCC
Confidence 5788887 8 765 22 444333222110 00112358999999999999999999998765 499999987
Q ss_pred ceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccccc
Q 009917 240 HWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELS 319 (522)
Q Consensus 240 ~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 319 (522)
. ++|+.. + ..+ ..
T Consensus 179 ~-~l~~~~----~--~~~--------------------------------~~---------------------------- 191 (408)
T 2gqw_A 179 R-LMSRAA----P--ATL--------------------------------AD---------------------------- 191 (408)
T ss_dssp S-SSTTTS----C--HHH--------------------------------HH----------------------------
T ss_pred c-cccccc----C--HHH--------------------------------HH----------------------------
Confidence 6 444311 0 000 00
Q ss_pred ccceeccCCcccccccCCcEEEeecC-ceeEecCcEEEcCCCceecccEEEEecCCCCCcccccccccccccccccCCCC
Q 009917 320 SCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPT 398 (522)
Q Consensus 320 ~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~~~ 398 (522)
.+.+.+++.+|+++.+. +.++.+++|+++||++ +++|.||+|||++++..+++....+ .+.
T Consensus 192 ---------~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~-i~~D~vi~a~G~~p~~~l~~~~gl~--------~~~ 253 (408)
T 2gqw_A 192 ---------FVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTR-IAADMVVVGIGVLANDALARAAGLA--------CDD 253 (408)
T ss_dssp ---------HHHHHHHHTTCEEEESCCEEEEETTEEEETTSCE-EECSEEEECSCEEECCHHHHHHTCC--------BSS
T ss_pred ---------HHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCE-EEcCEEEECcCCCccHHHHHhCCCC--------CCC
Confidence 01122334456777664 7777644788999988 9999999999999987654322111 111
Q ss_pred CCcccceeecCCCCCceEEEcccCCcc-----------hhhhHHHHHHHHHHHHcCCC
Q 009917 399 EKLPLYREIIHPQIPQLAIIGFSESIS-----------NLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 399 ~~~~ly~~~~~~~~pnl~~iG~~~~~~-----------~~~~~e~qa~~ia~~l~g~~ 445 (522)
++.... .+.++.||+|++|.+.... .+..+..|++.+|..+.|..
T Consensus 254 -gi~Vd~-~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 309 (408)
T 2gqw_A 254 -GIFVDA-YGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPT 309 (408)
T ss_dssp -SEECCT-TCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTT
T ss_pred -CEEECC-CCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCC
Confidence 233333 2346889999999654321 34678999999999998754
No 53
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.94 E-value=2.2e-27 Score=245.76 Aligned_cols=302 Identities=15% Similarity=0.136 Sum_probs=186.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCcccee----ecCCCCCCCCCCCCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQ----FSDYPWPDSVTTDFP 74 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 74 (522)
|.++||+|||||++|+++|..|++.|.+|+|||+++ +||+|.+ +.|...+......+. +..+.++. ....
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~---~~~~ 79 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKA---KPEL 79 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEEC---CCEE
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCC---CCCc
Confidence 334789999999999999999999999999999987 9999876 444332211111100 01111110 0001
Q ss_pred ChhHHH-------HH----HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCC
Q 009917 75 DHNQVL-------DY----IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKN 143 (522)
Q Consensus 75 ~~~~~~-------~y----l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 143 (522)
....+. ++ +..++++.++ .+..++.+ .++ . ++|++. +
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~-~~~--~------------------------~~v~v~-g-- 127 (464)
T 2eq6_A 80 DLKKLGGWRDQVVKKLTGGVGTLLKGNGV--ELLRGFAR-LVG--P------------------------KEVEVG-G-- 127 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESCEE-EEE--T------------------------TEEEET-T--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEeeeEE-Ecc--C------------------------CEEEEc-c--
Confidence 112222 22 2344555666 55555433 232 1 245554 3
Q ss_pred CceeEEEeCEEEEeecccCCCCCCCC-CCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHH
Q 009917 144 HSTEVHQVDFVILCVGRFSDVPNIPE-FPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMEC 222 (522)
Q Consensus 144 g~~~~~~~d~lvvAtG~~s~~p~~P~-~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l 222 (522)
+++.||+||+|||+ .|..|+ +| + + +.++++.++.... ...+++|+|||+|.+|+|+|..|
T Consensus 128 ---~~~~~d~lViATGs---~p~~p~gi~---~-~---~~v~~~~~~~~l~------~~~~~~vvViGgG~~g~e~A~~l 188 (464)
T 2eq6_A 128 ---ERYGAKSLILATGS---EPLELKGFP---F-G---EDVWDSTRALKVE------EGLPKRLLVIGGGAVGLELGQVY 188 (464)
T ss_dssp ---EEEEEEEEEECCCE---EECCBTTBC---C-S---SSEECHHHHTCGG------GCCCSEEEEECCSHHHHHHHHHH
T ss_pred ---EEEEeCEEEEcCCC---CCCCCCCCC---C-C---CcEEcHHHHHhhh------hhcCCEEEEECCCHHHHHHHHHH
Confidence 57999999999995 467664 65 5 2 2466776665532 23579999999999999999999
Q ss_pred hhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhcc
Q 009917 223 TTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (522)
Q Consensus 223 ~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (522)
++.+. +||++.|.+. ++|... .. +.+.
T Consensus 189 ~~~g~---~Vtlv~~~~~-~l~~~~-------~~--------------------------------~~~~---------- 215 (464)
T 2eq6_A 189 RRLGA---EVTLIEYMPE-ILPQGD-------PE--------------------------------TAAL---------- 215 (464)
T ss_dssp HHTTC---EEEEECSSSS-SSTTSC-------HH--------------------------------HHHH----------
T ss_pred HHCCC---eEEEEEcCCc-cccccC-------HH--------------------------------HHHH----------
Confidence 98764 4999999876 444322 00 0000
Q ss_pred ccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC--c--EEEc-C--CC--ceecccEEEEec
Q 009917 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--G--IVVD-G--QT--TPLKTDLVILAT 372 (522)
Q Consensus 303 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~--g--v~~~-d--G~--~~~~~D~VI~aT 372 (522)
+.+.+++.+|+++.+. +.++..+ + |.++ + |+ + +++|.||+||
T Consensus 216 ---------------------------l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~vv~a~ 267 (464)
T 2eq6_A 216 ---------------------------LRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEE-VVVDKVLVAV 267 (464)
T ss_dssp ---------------------------HHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEE-EEESEEEECS
T ss_pred ---------------------------HHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeE-EEcCEEEECC
Confidence 1112333455666553 5666432 2 5565 6 76 6 8999999999
Q ss_pred CCCCCcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCCC
Q 009917 373 GFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 373 G~~~~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~~ 445 (522)
|++|+..++. ++..... ++.+.+..... +.++.||+|++|.+.. +...+.+..|++.+|..+.|..
T Consensus 268 G~~p~~~~l~------l~~~g~~~~~~G~i~vd~~-~~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g~~ 335 (464)
T 2eq6_A 268 GRKPRTEGLG------LEKAGVKVDERGFIRVNAR-METSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKD 335 (464)
T ss_dssp CEEESCTTSS------HHHHTCCBCTTSCBCCCTT-CBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred CcccCCCCCC------hhhcCceecCCCCEEECCC-cccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 9999876421 1110010 12222333322 4468999999997654 3346789999999999998753
No 54
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.94 E-value=1.8e-28 Score=255.63 Aligned_cols=312 Identities=15% Similarity=0.153 Sum_probs=186.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce----eecCCCCCCCCCCCCCChh
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDFPDHN 77 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 77 (522)
+||+|||||++|+++|..|++.|++|+|||++ .+||+|.+ +.|...+..+...+ .+..+.++. .....+..
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~--~~~~~~~~ 85 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQV--DRISVNGK 85 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEEC--SEEEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCC--CCCccCHH
Confidence 69999999999999999999999999999996 49999876 66654442222111 111121211 11123456
Q ss_pred HHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEe
Q 009917 78 QVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILC 157 (522)
Q Consensus 78 ~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvA 157 (522)
++.+++..+.+++.. .+. ..+..+.... ...|.+. | .+.++|++.++ .++.||+||+|
T Consensus 86 ~~~~~~~~~~~~~~~--~~~--~~v~~~~~~~----------~~~g~a~-~--~~~~~v~~~~~-----~~~~~d~lViA 143 (492)
T 3ic9_A 86 AVMKRIQTERDRFVG--FVV--ESVESFDEQD----------KIRGFAK-F--LDEHTLQVDDH-----SQVIAKRIVIA 143 (492)
T ss_dssp HHHHHHHHHHHHHHH--HHH--HHHHHSCGGG----------EEESCEE-E--EETTEEEETTT-----EEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHH--HHH--HHHHhhcCee----------EEEEEEE-E--ecCCEEEEcCC-----cEEEeCEEEEc
Confidence 677777666555421 100 0000000000 0000000 0 01256777554 68999999999
Q ss_pred ecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEc
Q 009917 158 VGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYR 237 (522)
Q Consensus 158 tG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r 237 (522)
||+ .|..|+++ +.. ...++++.++... ...+|+|+|||+|.+|+|+|..|+..+. +||++.|
T Consensus 144 TGs---~p~~p~~~---~~~--~~~v~t~~~~~~~-------~~~~k~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~ 205 (492)
T 3ic9_A 144 TGS---RPNYPEFL---AAA--GSRLLTNDNLFEL-------NDLPKSVAVFGPGVIGLELGQALSRLGV---IVKVFGR 205 (492)
T ss_dssp CCE---ECCCCHHH---HTT--GGGEECHHHHTTC-------SSCCSEEEEESSCHHHHHHHHHHHHTTC---EEEEECC
T ss_pred cCC---CCcCCCCC---Ccc--CCcEEcHHHHhhh-------hhcCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEE
Confidence 994 57788755 322 2346666555442 2458999999999999999999999875 4999999
Q ss_pred ccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccc
Q 009917 238 TEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQE 317 (522)
Q Consensus 238 ~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 317 (522)
++. ++|... .. +...+
T Consensus 206 ~~~-~l~~~d-------~~--------------------------------~~~~l------------------------ 221 (492)
T 3ic9_A 206 SGS-VANLQD-------EE--------------------------------MKRYA------------------------ 221 (492)
T ss_dssp TTC-CTTCCC-------HH--------------------------------HHHHH------------------------
T ss_pred CCc-ccccCC-------HH--------------------------------HHHHH------------------------
Confidence 887 444432 00 00011
Q ss_pred ccccceeccCCcccccccCCcEEEeecC-ceeEec--Cc--EEEc--CC--CceecccEEEEecCCCCCccccccccccc
Q 009917 318 LSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DG--IVVD--GQ--TTPLKTDLVILATGFKGDVKLKNIFLSQT 388 (522)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~g--v~~~--dG--~~~~~~D~VI~aTG~~~~~~l~~~~~~~~ 388 (522)
.+.+++. |+++.+. +.++.. ++ +.+. +| ++ +++|.||+|||++|+..++..
T Consensus 222 -------------~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~-i~~D~Vi~a~G~~p~~~~l~l----- 281 (492)
T 3ic9_A 222 -------------EKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTT-ESFQYVLAATGRKANVDKLGL----- 281 (492)
T ss_dssp -------------HHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEE-EEESEEEECSCCEESCSSSCG-----
T ss_pred -------------HHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEE-EECCEEEEeeCCccCCCCCCh-----
Confidence 1122233 4555443 555543 23 4444 67 45 999999999999998765321
Q ss_pred ccccccC-CCCCCcccceeecCCCCCceEEEcccCCc-chhhhHHHHHHHHHHHHcC
Q 009917 389 FQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSESI-SNLYTSEMRCRWLAELLDG 443 (522)
Q Consensus 389 l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~ia~~l~g 443 (522)
+..... ++.+.+......+.++.||+|++|.+... ...+.+..|++.+|..+.+
T Consensus 282 -~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 282 -ENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp -GGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHH
T ss_pred -hhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcC
Confidence 110111 12222222213345688999999976543 3456899999999998865
No 55
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=3.2e-27 Score=244.22 Aligned_cols=298 Identities=16% Similarity=0.220 Sum_probs=184.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce----eecC---CCCCCCCCCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSD---YPWPDSVTTDF 73 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~ 73 (522)
++||+|||||++|+++|..|++.|.+|+|||+ +.+||+|.+ +.|...+......+ .+.. +.++.. ...
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~--~~~ 81 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA--SPR 81 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC--CCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC--CCc
Confidence 47999999999999999999999999999999 789999986 55543321111111 1111 222211 111
Q ss_pred CChhHHHHH-----------HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCC
Q 009917 74 PDHNQVLDY-----------IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK 142 (522)
Q Consensus 74 ~~~~~~~~y-----------l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 142 (522)
.+..++..+ +..+.++.++ .+..++.+. ++ . ++|++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~~~~-~~--~------------------------~~v~v~~-- 130 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGV--KVVHGWAKV-LD--G------------------------KQVEVDG-- 130 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECSCEEE-EE--T------------------------TEEEETT--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEEEEEE-cc--C------------------------CEEEEee--
Confidence 233344333 2345556666 565554432 22 2 3566543
Q ss_pred CCceeEEEeCEEEEeecccCCCCCCCC-CCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHH
Q 009917 143 NHSTEVHQVDFVILCVGRFSDVPNIPE-FPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAME 221 (522)
Q Consensus 143 ~g~~~~~~~d~lvvAtG~~s~~p~~P~-~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~ 221 (522)
.++.||+||+|||+ .|..|+ +| . .+.++|+.++.... ..+|+|+|||+|.+|+|+|..
T Consensus 131 ----~~~~~d~lviATGs---~p~~~~~~~---~----~~~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e~A~~ 189 (458)
T 1lvl_A 131 ----QRIQCEHLLLATGS---SSVELPMLP---L----GGPVISSTEALAPK-------ALPQHLVVVGGGYIGLELGIA 189 (458)
T ss_dssp ----EEEECSEEEECCCE---EECCBTTBC---C----BTTEECHHHHTCCS-------SCCSEEEEECCSHHHHHHHHH
T ss_pred ----EEEEeCEEEEeCCC---CCCCCCCCC---c----cCcEecHHHHhhhh-------ccCCeEEEECcCHHHHHHHHH
Confidence 57999999999995 466654 33 1 22467776665432 357999999999999999999
Q ss_pred HhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhc
Q 009917 222 CTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKH 301 (522)
Q Consensus 222 l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (522)
|++.+. +||++.|.+. ++|... ..+ .+.+
T Consensus 190 l~~~g~---~Vtlv~~~~~-~l~~~~-------~~~--------------------------------~~~l-------- 218 (458)
T 1lvl_A 190 YRKLGA---QVSVVEARER-ILPTYD-------SEL--------------------------------TAPV-------- 218 (458)
T ss_dssp HHHHTC---EEEEECSSSS-SSTTSC-------HHH--------------------------------HHHH--------
T ss_pred HHHCCC---eEEEEEcCCc-cccccC-------HHH--------------------------------HHHH--------
Confidence 998875 4999999886 445321 000 0000
Q ss_pred cccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCcEEEc--CC--CceecccEEEEecCCCC
Q 009917 302 RLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVD--GQ--TTPLKTDLVILATGFKG 376 (522)
Q Consensus 302 ~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~~--dG--~~~~~~D~VI~aTG~~~ 376 (522)
.+.+++.+|+++.+. +.+++.+++.+. +| ++ +++|.||+|||++|
T Consensus 219 -----------------------------~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~-i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 219 -----------------------------AESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLR-LEADRVLVAVGRRP 268 (458)
T ss_dssp -----------------------------HHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCE-ECCSCEEECCCEEE
T ss_pred -----------------------------HHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEE-EECCEEEECcCCCc
Confidence 111222345555543 555554334444 56 45 99999999999999
Q ss_pred CcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCC
Q 009917 377 DVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 377 ~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
+..++. ++..... ++. .+.+... +.++.||+|++|.+.. +...+.+..|++.+|..+.|.
T Consensus 269 ~~~~l~------~~~~g~~~~~~-~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 330 (458)
T 1lvl_A 269 RTKGFN------LECLDLKMNGA-AIAIDER-CQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGK 330 (458)
T ss_dssp CCSSSS------GGGSCCCEETT-EECCCTT-CBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCC------cHhcCCcccCC-EEeECCC-CcCCCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 876421 0110000 111 2223222 3467899999997654 334678899999999999874
No 56
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.94 E-value=1e-26 Score=241.34 Aligned_cols=307 Identities=15% Similarity=0.180 Sum_probs=183.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccc-eeecCCCCCCCC--CCCCCCh
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQL-YQFSDYPWPDSV--TTDFPDH 76 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 76 (522)
.++||+|||||++|+++|..|++.|++|+|||++ .+||+|.+ ++|...+...... +.+...|+.... .......
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 3589999999999999999999999999999998 79999987 4444322111111 111111111000 0011112
Q ss_pred hHHH-------HHHH-----HHHHhc-CCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCC
Q 009917 77 NQVL-------DYIQ-----SYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKN 143 (522)
Q Consensus 77 ~~~~-------~yl~-----~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 143 (522)
..+. ++++ ...++. ++ .+..+ ++..++. +.+.|.+.+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v--~~~~g-~~~~~~~------------------------~~~~v~~~~--- 131 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAI--TVVHG-EARFKDD------------------------QSLTVRLNE--- 131 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTE--EEEEE-EEEEEET------------------------TEEEEEETT---
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCe--EEEEE-EEEEccC------------------------CEEEEEeCC---
Confidence 2222 2332 222333 33 33333 3544432 235565533
Q ss_pred CceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHh
Q 009917 144 HSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECT 223 (522)
Q Consensus 144 g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~ 223 (522)
|+.+++.||+||+|||+ .|+.|++| |.+.. .++++.+... ....+|+|+|||+|.+|+|+|..++
T Consensus 132 g~~~~~~~d~lviAtGs---~p~~p~i~---G~~~~--~~~~~~~~~~-------~~~~~~~vvViGgG~~g~E~A~~l~ 196 (467)
T 1zk7_A 132 GGERVVMFDRCLVATGA---SPAVPPIP---GLKES--PYWTSTEALA-------SDTIPERLAVIGSSVVALELAQAFA 196 (467)
T ss_dssp SSEEEEECSEEEECCCE---EECCCCCT---TTTTS--CCBCHHHHHH-------CSSCCSEEEEECCSHHHHHHHHHHH
T ss_pred CceEEEEeCEEEEeCCC---CCCCCCCC---CCCcC--ceecHHHHhc-------ccccCCEEEEECCCHHHHHHHHHHH
Confidence 33457999999999994 57888888 76543 2344433322 1235899999999999999999999
Q ss_pred hhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccc
Q 009917 224 TANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (522)
Q Consensus 224 ~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (522)
+.+. +||++.|++. ++| .. ..+. ..
T Consensus 197 ~~g~---~Vtlv~~~~~-~l~-~~-------~~~~--------------------------------~~----------- 221 (467)
T 1zk7_A 197 RLGS---KVTVLARNTL-FFR-ED-------PAIG--------------------------------EA----------- 221 (467)
T ss_dssp HTTC---EEEEECSSCT-TTT-SC-------HHHH--------------------------------HH-----------
T ss_pred HcCC---EEEEEEECCc-cCC-CC-------HHHH--------------------------------HH-----------
Confidence 8865 4999999876 444 22 0000 00
Q ss_pred cccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCc----EEEcCCCceecccEEEEecCCCCCc
Q 009917 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVDGQTTPLKTDLVILATGFKGDV 378 (522)
Q Consensus 304 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g----v~~~dG~~~~~~D~VI~aTG~~~~~ 378 (522)
+.+.+++.+|+++.+. +.++..++ |.++ +.+ +++|.||+|||++++.
T Consensus 222 --------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~-i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 222 --------------------------VTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGE-LRADKLLVATGRTPNT 273 (467)
T ss_dssp --------------------------HHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEE-EEESEEEECSCEEESC
T ss_pred --------------------------HHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcE-EEcCEEEECCCCCcCC
Confidence 1112333345565553 55554322 4444 456 9999999999999986
Q ss_pred ccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCC
Q 009917 379 KLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 379 ~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
.++. ++..... +..+.+.... .+.++.||+|++|.+.. +...+.+..|++.+|..+.+.
T Consensus 274 ~~l~------l~~~gl~~~~~G~i~vd~-~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 274 RSLA------LDAAGVTVNAQGAIVIDQ-GMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGG 334 (467)
T ss_dssp TTSC------GGGGTCCBCTTSCBCCCT-TCBCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred CcCC------chhcCCcCCCCCCEEECC-CcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 5321 1111111 1122233332 24568999999997654 334678899999999988764
No 57
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.94 E-value=4.8e-27 Score=244.46 Aligned_cols=301 Identities=15% Similarity=0.168 Sum_probs=186.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce----eecCCCCCCCCCCCCCCh
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDFPDH 76 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (522)
++||+|||||++|+++|..|++.|++|+|||++ .+||+|.+ ++|...+......+ .+..+.++. .......
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~--~~~~~~~ 96 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPS--CEGKFNW 96 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCC--CCCCCCH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccC--CCCccCH
Confidence 479999999999999999999999999999976 79999887 55544332211111 112222221 1223344
Q ss_pred hHHHHHHHHHHHh-----------cCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCc
Q 009917 77 NQVLDYIQSYASH-----------FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHS 145 (522)
Q Consensus 77 ~~~~~yl~~~~~~-----------~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~ 145 (522)
.++.+|...+.++ .++ .+..+ ++..++ ...+.|+ .++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~~~------------------------~~~~~v~-~~g---- 144 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHI--EIIRG-HAAFTS------------------------DPKPTIE-VSG---- 144 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEECS------------------------CSSCEEE-ETT----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEe-EEEEee------------------------CCeEEEE-ECC----
Confidence 5555555544433 233 22222 222211 1235666 333
Q ss_pred eeEEEeCEEEEeecccCCCCCCC---CCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHH
Q 009917 146 TEVHQVDFVILCVGRFSDVPNIP---EFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMEC 222 (522)
Q Consensus 146 ~~~~~~d~lvvAtG~~s~~p~~P---~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l 222 (522)
.++.||+||+|||+ .|..| ++| |.+ ..+++.++..+ ...+|+|+|||+|.+|+|+|..+
T Consensus 145 -~~~~~d~lviAtG~---~p~~p~~~~i~---G~~----~~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l 206 (478)
T 3dk9_A 145 -KKYTAPHILIATGG---MPSTPHESQIP---GAS----LGITSDGFFQL-------EELPGRSVIVGAGYIAVEMAGIL 206 (478)
T ss_dssp -EEEECSCEEECCCE---EECCCCTTTST---TGG----GSBCHHHHTTC-------CSCCSEEEEECCSHHHHHHHHHH
T ss_pred -EEEEeeEEEEccCC---CCCCCCcCCCC---CCc----eeEchHHhhch-------hhcCccEEEECCCHHHHHHHHHH
Confidence 57999999999994 57777 777 765 23455544432 23579999999999999999999
Q ss_pred hhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhcc
Q 009917 223 TTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (522)
Q Consensus 223 ~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (522)
+..+. +||++.|.+. ++|... ..+ ...
T Consensus 207 ~~~g~---~Vtlv~~~~~-~l~~~d-------~~~--------------------------------~~~---------- 233 (478)
T 3dk9_A 207 SALGS---KTSLMIRHDK-VLRSFD-------SMI--------------------------------STN---------- 233 (478)
T ss_dssp HHTTC---EEEEECSSSS-SCTTSC-------HHH--------------------------------HHH----------
T ss_pred HHcCC---eEEEEEeCCc-cccccC-------HHH--------------------------------HHH----------
Confidence 98865 4999999887 445432 000 000
Q ss_pred ccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEec--Cc----EEEcC---C----CceecccEE
Q 009917 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DG----IVVDG---Q----TTPLKTDLV 368 (522)
Q Consensus 303 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~g----v~~~d---G----~~~~~~D~V 368 (522)
+.+.+++.+|+++.+. +.++.. ++ +.+.+ | ++ +++|.|
T Consensus 234 ---------------------------~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~-~~~D~v 285 (478)
T 3dk9_A 234 ---------------------------CTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMI-PDVDCL 285 (478)
T ss_dssp ---------------------------HHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEE-EEESEE
T ss_pred ---------------------------HHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceE-EEcCEE
Confidence 1112333445555553 555542 23 45554 2 45 899999
Q ss_pred EEecCCCCCcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccC-CcchhhhHHHHHHHHHHHHcCC
Q 009917 369 ILATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSE-SISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 369 I~aTG~~~~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~-~~~~~~~~e~qa~~ia~~l~g~ 444 (522)
|+|||++|+...+. ++..... ++.+.+.... .+.++.||||++|.+. .+...+.+..|++.+|..+.|.
T Consensus 286 i~a~G~~p~~~~l~------l~~~g~~~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 286 LWAIGRVPNTKDLS------LNKLGIQTDDKGHIIVDE-FQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp EECSCEEESCTTSC------GGGGTCCBCTTCCBCCCT-TCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred EEeeccccCCCCCC------chhcCCeeCCCCCEeeCC-CcccCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCC
Confidence 99999999875211 1111010 1223233322 3356899999999765 3445678899999999988765
No 58
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.94 E-value=9.5e-27 Score=237.51 Aligned_cols=296 Identities=15% Similarity=0.067 Sum_probs=190.4
Q ss_pred CcEEEECCChhHHHHHHHHHh---cCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLL---KGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~---~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
++|+|||||++|+++|..|++ .|.+|+|||+++.++.... .++. .......+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~-------------------~~~~---~~~~~~~~~~~ 59 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA-------------------LPHV---AIGVRDVDELK 59 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS-------------------SCCC---CSSCCCCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc-------------------hhhc---ccCCcCHHHHH
Confidence 589999999999999999999 8999999999875432100 0000 11112223445
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
.++.+.++++++ .+..+ +|+.++... ..|++.++. +...++.||+||+|||.
T Consensus 60 ~~~~~~~~~~gv--~~~~~-~v~~i~~~~------------------------~~V~~~~g~-~~~~~~~~d~lViAtG~ 111 (409)
T 3h8l_A 60 VDLSEALPEKGI--QFQEG-TVEKIDAKS------------------------SMVYYTKPD-GSMAEEEYDYVIVGIGA 111 (409)
T ss_dssp EEHHHHTGGGTC--EEEEC-EEEEEETTT------------------------TEEEEECTT-SCEEEEECSEEEECCCC
T ss_pred HHHHHHHhhCCe--EEEEe-eEEEEeCCC------------------------CEEEEccCC-cccceeeCCEEEECCCC
Confidence 566777777887 66655 888888654 357777653 34467999999999994
Q ss_pred cCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhh-hhccCCCEEEEEcCC-------------------C------C
Q 009917 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAA-ANLVKGKRVTVVGLQ-------------------K------S 214 (522)
Q Consensus 161 ~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~-~~~~~gk~VvVIG~G-------------------~------s 214 (522)
.|+.|.+| |.+. ...|...+.+...... .... .++++|||+| . .
T Consensus 112 ---~~~~~~ip---G~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~ 181 (409)
T 3h8l_A 112 ---HLATELVK---GWDK---YGYSVCEPEFATKLREKLESF-QGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGP 181 (409)
T ss_dssp ---EECGGGSB---THHH---HCEESSSTTHHHHHHHHHHHC-CSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHH
T ss_pred ---CcCccCCC---Chhh---cCcCcCCHHHHHHHHHHHHHh-cCCeEEEEecccccCCCccccccccccCCCCcccCCH
Confidence 57777777 7664 2344444433211000 0112 2567799999 2 2
Q ss_pred HHHHHHHHhhh----cC-CCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHH
Q 009917 215 ALDIAMECTTA----NG-LENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAI 289 (522)
Q Consensus 215 g~dia~~l~~~----~~-~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (522)
++|+|..++.. +. ...+|+++.+.+ ++|... ..+
T Consensus 182 ~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~--~l~~~~-------~~~-------------------------------- 220 (409)
T 3h8l_A 182 VFEMSLMLHGYFKKKGMLDKVHVTVFSPGE--YLSDLS-------PNS-------------------------------- 220 (409)
T ss_dssp HHHHHHHHHHHHHTTTCTTTEEEEEECSSS--SSTTBC-------HHH--------------------------------
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEEEeCCc--cccccC-------HHH--------------------------------
Confidence 78888766532 21 002599999877 344321 000
Q ss_pred HHHHHHHHhhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCcEEEcCCCceecccEE
Q 009917 290 SKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDGQTTPLKTDLV 368 (522)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~~dG~~~~~~D~V 368 (522)
.. .+.+.+++.+|+++.+. |+++++++|+++||++ +++|.|
T Consensus 221 ~~-------------------------------------~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~-~~~D~v 262 (409)
T 3h8l_A 221 RK-------------------------------------AVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNT-IPADIT 262 (409)
T ss_dssp HH-------------------------------------HHHHHHHHHTCEEECSCCEEEECSSEEEETTSCE-EECSEE
T ss_pred HH-------------------------------------HHHHHHHHCCCEEEcCCceEEECCCeEEECCCCE-EeeeEE
Confidence 00 01122334467787765 8899999999999998 999999
Q ss_pred EEecCCCCCcccccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCC---cchhhhHHHHHHHHHHHHcCCC
Q 009917 369 ILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES---ISNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 369 I~aTG~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~---~~~~~~~e~qa~~ia~~l~g~~ 445 (522)
|+|||++++..+.+ .... + .+..+.+.+...+..+++||+|++|.+.. +.....++.|++.+|+.|.+.+
T Consensus 263 i~a~G~~~~~~l~~-~~~~-----l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 263 ILLPPYTGNPALKN-STPD-----L-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp EEECCEECCHHHHT-SCGG-----G-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred EECCCCCccHHHHh-cccc-----C-cCCCCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 99999998743221 1001 1 12334455555555668999999997654 3456789999999999876544
No 59
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=3.6e-27 Score=245.03 Aligned_cols=310 Identities=15% Similarity=0.176 Sum_probs=189.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCcccee-----ecCCCCC--C---CC
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQ-----FSDYPWP--D---SV 69 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~~-----~~~~~~~--~---~~ 69 (522)
.++||+|||||++|+++|..|++.|++|+|||+++.+||+|.. +.|...+......+. +..+.++ . .+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 3579999999999999999999999999999999899999976 344322111100000 0000000 0 00
Q ss_pred CCCCCChh----HHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCc
Q 009917 70 TTDFPDHN----QVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHS 145 (522)
Q Consensus 70 ~~~~~~~~----~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~ 145 (522)
...+.... .+.+++...+++.++ .+.+++.+. ++ . +.|.|++.+ |+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~~--~----------------------~~~~v~~~~---G~ 134 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKV--TYVKGYGKF-VS--P----------------------SEISVDTIE---GE 134 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCEEE-EE--T----------------------TEEEECCSS---SC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE-ec--C----------------------CEEEEEeCC---Cc
Confidence 00000011 122334556666777 677776543 32 1 235665433 33
Q ss_pred eeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhh
Q 009917 146 TEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTA 225 (522)
Q Consensus 146 ~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~ 225 (522)
..++.||+||+|||+ .|..|+++ |.+. ..++++.+.... ...+|+|+|||+|.+|+|+|..|++.
T Consensus 135 ~~~i~~d~lIiAtGs---~p~~p~~~---g~~~--~~v~~~~~~~~~-------~~~~~~vvViGgG~~g~e~A~~l~~~ 199 (470)
T 1dxl_A 135 NTVVKGKHIIIATGS---DVKSLPGV---TIDE--KKIVSSTGALAL-------SEIPKKLVVIGAGYIGLEMGSVWGRI 199 (470)
T ss_dssp CEEEECSEEEECCCE---EECCBTTB---CCCS--SSEECHHHHTTC-------SSCCSEEEESCCSHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEECCCC---CCCCCCCC---CCCc--ccEEeHHHhhhh-------hhcCCeEEEECCCHHHHHHHHHHHHc
Confidence 357999999999995 46777777 6543 136666655442 13579999999999999999999988
Q ss_pred cCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccc
Q 009917 226 NGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAK 305 (522)
Q Consensus 226 ~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (522)
+. +|+++.|++. ++|... .. +...+
T Consensus 200 g~---~Vtli~~~~~-~l~~~~-------~~--------------------------------~~~~l------------ 224 (470)
T 1dxl_A 200 GS---EVTVVEFASE-IVPTMD-------AE--------------------------------IRKQF------------ 224 (470)
T ss_dssp TC---EEEEECSSSS-SSTTSC-------HH--------------------------------HHHHH------------
T ss_pred CC---cEEEEEcCCc-cccccc-------HH--------------------------------HHHHH------------
Confidence 75 4999999886 445322 00 00001
Q ss_pred cCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCc----EEEc---CC--CceecccEEEEecCCC
Q 009917 306 FGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVD---GQ--TTPLKTDLVILATGFK 375 (522)
Q Consensus 306 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g----v~~~---dG--~~~~~~D~VI~aTG~~ 375 (522)
.+.+++.+|+++.+. +.++..++ +.++ +| ++ +++|.||+|||++
T Consensus 225 -------------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 225 -------------------------QRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTI-IEADVVLVSAGRT 278 (470)
T ss_dssp -------------------------HHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEE-EEESEEECCCCEE
T ss_pred -------------------------HHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceE-EECCEEEECCCCC
Confidence 112223345555543 55555432 3444 55 45 8999999999999
Q ss_pred CCcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCCc-chhhhHHHHHHHHHHHHcCC
Q 009917 376 GDVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSESI-SNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 376 ~~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~ia~~l~g~ 444 (522)
|+..++. +++.... ++.+.+..... +.++.||+|++|.+... ...+.+..|++.+|..+.|.
T Consensus 279 p~~~~l~------~~~~gl~~~~~G~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 342 (470)
T 1dxl_A 279 PFTSGLN------LDKIGVETDKLGRILVNER-FSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGK 342 (470)
T ss_dssp ECCTTSC------CTTTTCCBCSSSCBCCCTT-CBCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTTS
T ss_pred cCCCCCC------chhcCCccCCCCCEeECcC-CccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 9876521 0110010 12232333333 34689999999976543 34677899999999999875
No 60
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.94 E-value=4.3e-27 Score=241.23 Aligned_cols=294 Identities=17% Similarity=0.180 Sum_probs=183.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC--ceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
+++|+|||||++|+++|..|++.|. +|+|||+++.++.. . + ..+..+.. ... ...++.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~--~--~----~l~~~~~~-----------~~~-~~~~~~ 63 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHH--L--P----PLSKAYLA-----------GKA-TAESLY 63 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBC--S--G----GGGTTTTT-----------TCS-CSGGGB
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCc--C--C----CCcHHHhC-----------CCC-ChHHhc
Confidence 5899999999999999999999998 79999998654310 0 0 00000000 000 001111
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
....++++++++ .++++++|+.++... +.|++.++ +++.||+||+|||.
T Consensus 64 ~~~~~~~~~~gv--~~~~~~~v~~i~~~~------------------------~~v~~~~g-----~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 64 LRTPDAYAAQNI--QLLGGTQVTAINRDR------------------------QQVILSDG-----RALDYDRLVLATGG 112 (431)
T ss_dssp SSCHHHHHHTTE--EEECSCCEEEEETTT------------------------TEEEETTS-----CEEECSEEEECCCE
T ss_pred ccCHHHHHhCCC--EEEeCCEEEEEECCC------------------------CEEEECCC-----CEEECCEEEEcCCC
Confidence 111233456777 788889999998654 46777665 47999999999995
Q ss_pred cCCCCCCCCCCCCCCCCccCc-e-EEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcc
Q 009917 161 FSDVPNIPEFPPKKGPEAFHG-K-VIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (522)
Q Consensus 161 ~s~~p~~P~~p~~~g~~~f~g-~-~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~ 238 (522)
.|+.|++| |.+ +.+ . +++.....+.. ........+++|+|||+|.+|+|+|..|++.+. +|+++.|.
T Consensus 113 ---~p~~~~i~---G~~-~~~~~~v~~~~~~~d~~-~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~---~Vtlv~~~ 181 (431)
T 1q1r_A 113 ---RPRPLPVA---SGA-VGKANNFRYLRTLEDAE-CIRRQLIADNRLVVIGGGYIGLEVAATAIKANM---HVTLLDTA 181 (431)
T ss_dssp ---EECCCGGG---TTH-HHHSTTEEESSSHHHHH-HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSS
T ss_pred ---CccCCCCC---Ccc-cCCCceEEEECCHHHHH-HHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCC---EEEEEEeC
Confidence 57888888 764 222 1 33322221110 000122468999999999999999999998765 49999988
Q ss_pred cceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccc
Q 009917 239 EHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQEL 318 (522)
Q Consensus 239 ~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 318 (522)
+. ++|+.. +..+ ...
T Consensus 182 ~~-~l~~~~------~~~~--------------------------------~~~-------------------------- 196 (431)
T 1q1r_A 182 AR-VLERVT------APPV--------------------------------SAF-------------------------- 196 (431)
T ss_dssp SS-TTTTTS------CHHH--------------------------------HHH--------------------------
T ss_pred Cc-cccchh------hHHH--------------------------------HHH--------------------------
Confidence 76 333311 0000 000
Q ss_pred cccceeccCCcccccccCCcEEEeecC-ceeEec---C----cEEEcCCCceecccEEEEecCCCCCccccccccccccc
Q 009917 319 SSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE---D----GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQ 390 (522)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~---~----gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~ 390 (522)
+.+.+++.+|+++.+. +.++.. + +|.++||++ +++|.||+|||++++..+++.....
T Consensus 197 -----------l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~-i~~D~Vv~a~G~~p~~~l~~~~gl~--- 261 (431)
T 1q1r_A 197 -----------YEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTR-LPADLVIAGIGLIPNCELASAAGLQ--- 261 (431)
T ss_dssp -----------HHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCE-EECSEEEECCCEEECCHHHHHTTCC---
T ss_pred -----------HHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCE-EEcCEEEECCCCCcCcchhhccCCC---
Confidence 0111222345555553 566653 2 477889988 9999999999999987654322111
Q ss_pred ccccCCCCCCcccceeecCCCCCceEEEcccCCcc-----------hhhhHHHHHHHHHHHHcCCC
Q 009917 391 DYLAGSPTEKLPLYREIIHPQIPQLAIIGFSESIS-----------NLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 391 ~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~-----------~~~~~e~qa~~ia~~l~g~~ 445 (522)
.+ +++.... .+.++.||+|++|.+.... .+..+..|++.+|..+.|..
T Consensus 262 -----~~-~gi~Vd~-~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 320 (431)
T 1q1r_A 262 -----VD-NGIVINE-HMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKV 320 (431)
T ss_dssp -----BS-SSEECCT-TSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCC
T ss_pred -----CC-CCEEECC-CcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCC
Confidence 11 1222222 2456789999999654321 24678999999999998754
No 61
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.94 E-value=1.1e-27 Score=247.16 Aligned_cols=299 Identities=15% Similarity=0.178 Sum_probs=183.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce-----eecCCCCCCCCCCCCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY-----QFSDYPWPDSVTTDFPD 75 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 75 (522)
++||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+ +.|...+..+...+ ....+.++. ......
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~--~~~~~~ 80 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDT--TINKFN 80 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEE--EEEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccC--CCCccC
Confidence 479999999999999999999999999999997 78999976 44443221111000 000000000 000112
Q ss_pred hhHHHHHHHH-----------HHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCC
Q 009917 76 HNQVLDYIQS-----------YASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNH 144 (522)
Q Consensus 76 ~~~~~~yl~~-----------~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g 144 (522)
..++.++... ..++.++ .+..+ ++..++. +.|.+ ++
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~i~~--------------------------~~v~~-~g--- 127 (450)
T 1ges_A 81 WETLIASRTAYIDRIHTSYENVLGKNNV--DVIKG-FARFVDA--------------------------KTLEV-NG--- 127 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CCEEEET--------------------------TEEEE-TT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEecC--------------------------CEEEE-CC---
Confidence 2333333322 2334454 44433 3333321 24665 43
Q ss_pred ceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhh
Q 009917 145 STEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTT 224 (522)
Q Consensus 145 ~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~ 224 (522)
+++.||+||+|||+ .|..|++| |.+. ++++.++.. ....+|+|+|||+|.+|+|+|..|++
T Consensus 128 --~~~~~d~lviAtGs---~p~~p~i~---g~~~----~~~~~~~~~-------~~~~~~~vvViGgG~~g~e~A~~l~~ 188 (450)
T 1ges_A 128 --ETITADHILIATGG---RPSHPDIP---GVEY----GIDSDGFFA-------LPALPERVAVVGAGYIGVELGGVING 188 (450)
T ss_dssp --EEEEEEEEEECCCE---EECCCCST---TGGG----SBCHHHHHH-------CSSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred --EEEEeCEEEECCCC---CCCCCCCC---Cccc----eecHHHhhh-------hhhcCCeEEEECCCHHHHHHHHHHHh
Confidence 57999999999994 57788888 7632 344443322 12357999999999999999999998
Q ss_pred hcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhcccc
Q 009917 225 ANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLA 304 (522)
Q Consensus 225 ~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (522)
.+. +|+++.|.+. ++|... ..+ ...
T Consensus 189 ~g~---~Vtlv~~~~~-~l~~~~-------~~~--------------------------------~~~------------ 213 (450)
T 1ges_A 189 LGA---KTHLFEMFDA-PLPSFD-------PMI--------------------------------SET------------ 213 (450)
T ss_dssp TTC---EEEEECSSSS-SSTTSC-------HHH--------------------------------HHH------------
T ss_pred cCC---EEEEEEeCCc-hhhhhh-------HHH--------------------------------HHH------------
Confidence 765 4999999876 444322 000 000
Q ss_pred ccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC-----cEEEcCCCceecccEEEEecCCCCCc
Q 009917 305 KFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDGQTTPLKTDLVILATGFKGDV 378 (522)
Q Consensus 305 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----gv~~~dG~~~~~~D~VI~aTG~~~~~ 378 (522)
+.+.+++.+|+++.+. +.++..+ .|+++||++ +++|.||+|||++|+.
T Consensus 214 -------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~-i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 214 -------------------------LVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRS-ETVDCLIWAIGREPAN 267 (450)
T ss_dssp -------------------------HHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCE-EEESEEEECSCEEESC
T ss_pred -------------------------HHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcE-EEcCEEEECCCCCcCC
Confidence 0111222345555553 5566432 367789987 9999999999999986
Q ss_pred ccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCC
Q 009917 379 KLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 379 ~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
..+. +++.... ++.+.+..... +.++.||+|++|.+.. +...+.+..|++.+|..+.|.
T Consensus 268 ~~l~------~~~~gl~~~~~g~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 328 (450)
T 1ges_A 268 DNIN------LEAAGVKTNEKGYIVVDKY-QNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNN 328 (450)
T ss_dssp TTSC------HHHHTCCBCTTSCBCCCTT-SBCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCC------chhcCceECCCCCEeECCC-CccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 5211 0110010 12232333332 3578999999997654 345678999999999988764
No 62
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=4.3e-27 Score=245.84 Aligned_cols=303 Identities=13% Similarity=0.140 Sum_probs=178.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCcc----ceeecCCCCCCCCCCCCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQ----LYQFSDYPWPDSVTTDFP 74 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 74 (522)
|. +||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+ +.|...+..... ......+.+... ...
T Consensus 1 m~-~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~---~~~ 75 (500)
T 1onf_A 1 MV-YDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK---FSF 75 (500)
T ss_dssp -C-BSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC---CCC
T ss_pred Cc-cCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC---Ccc
Confidence 44 79999999999999999999999999999998 58999976 444322211100 000111111110 011
Q ss_pred ChhHHH-----------HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecC--
Q 009917 75 DHNQVL-----------DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA-- 141 (522)
Q Consensus 75 ~~~~~~-----------~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-- 141 (522)
...++. .++....++.++ .+..++ +..++. +.|++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~-~~~id~--------------------------~~v~v~~~~~ 126 (500)
T 1onf_A 76 NLPLLVERRDKYIQRLNNIYRQNLSKDKV--DLYEGT-ASFLSE--------------------------NRILIKGTKD 126 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESC-CCCC--------------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEeeC--------------------------CEEEEEeccc
Confidence 222222 223334445555 444442 222211 23333220
Q ss_pred ------CCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCH
Q 009917 142 ------KNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSA 215 (522)
Q Consensus 142 ------~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg 215 (522)
.++...++.||+||+||| +.|..|++| |.+ .++|+.++.... . +|+|+|||+|.+|
T Consensus 127 ~~~~~~~~~~~~~~~~d~lViAtG---s~p~~p~i~---G~~----~~~~~~~~~~~~-------~-~~~vvViGgG~ig 188 (500)
T 1onf_A 127 NNNKDNGPLNEEILEGRNILIAVG---NKPVFPPVK---GIE----NTISSDEFFNIK-------E-SKKIGIVGSGYIA 188 (500)
T ss_dssp --------------CBSSEEECCC---CCBCCCSCT---TGG----GCEEHHHHTTCC-------C-CSEEEEECCSHHH
T ss_pred cccccccCCCceEEEeCEEEECCC---CCCCCCCCC---CCC----cccCHHHHhccC-------C-CCeEEEECChHHH
Confidence 001124689999999999 467888888 764 256776665431 2 8999999999999
Q ss_pred HHHHHHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHH
Q 009917 216 LDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEA 295 (522)
Q Consensus 216 ~dia~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (522)
+|+|..|++.+. +||++.|.+. ++|..+ ..+ ...
T Consensus 189 ~E~A~~l~~~g~---~Vtlv~~~~~-~l~~~d-------~~~--------------------------------~~~--- 222 (500)
T 1onf_A 189 VELINVIKRLGI---DSYIFARGNR-ILRKFD-------ESV--------------------------------INV--- 222 (500)
T ss_dssp HHHHHHHHTTTC---EEEEECSSSS-SCTTSC-------HHH--------------------------------HHH---
T ss_pred HHHHHHHHHcCC---eEEEEecCCc-cCcccc-------hhh--------------------------------HHH---
Confidence 999999998765 4999999886 445432 000 000
Q ss_pred HHhhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC-----cEEEcCCCceecccEEE
Q 009917 296 DIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDGQTTPLKTDLVI 369 (522)
Q Consensus 296 ~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----gv~~~dG~~~~~~D~VI 369 (522)
+.+.+++.+|+++.+. +.++..+ .|+++||++.+++|.||
T Consensus 223 ----------------------------------l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi 268 (500)
T 1onf_A 223 ----------------------------------LENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVI 268 (500)
T ss_dssp ----------------------------------HHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEE
T ss_pred ----------------------------------HHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEE
Confidence 1122334456666654 6666532 36777886337999999
Q ss_pred EecCCCCCcc-c-ccccccccccccccCCCCCCcccceeecCCCCCceEEEcccC-------------------------
Q 009917 370 LATGFKGDVK-L-KNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSE------------------------- 422 (522)
Q Consensus 370 ~aTG~~~~~~-l-~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~------------------------- 422 (522)
+|||++|+.+ | ++... ...+.+.+..... +.++.||+|++|.+.
T Consensus 269 ~a~G~~p~~~~l~~~~~g--------~~~~~G~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~ 339 (500)
T 1onf_A 269 YCVGRSPDTENLKLEKLN--------VETNNNYIVVDEN-QRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNK 339 (500)
T ss_dssp ECCCBCCTTTTSSCTTTT--------CCBSSSCEEECTT-CBCSSSSEEECSTTEEEC----------------------
T ss_pred ECCCCCcCCCCCCchhcC--------ccccCCEEEECCC-cccCCCCEEEEecccccccccccccccccccccccccccc
Confidence 9999999874 2 12111 1111222222222 347899999999544
Q ss_pred ----------CcchhhhHHHHHHHHHHHHcCC
Q 009917 423 ----------SISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 423 ----------~~~~~~~~e~qa~~ia~~l~g~ 444 (522)
.+...+.+..|++.+|..+.|.
T Consensus 340 ~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~ 371 (500)
T 1onf_A 340 KENVTEDIFYNVQLTPVAINAGRLLADRLFLK 371 (500)
T ss_dssp --------CBCCCCHHHHHHHHHHHHHHHHSC
T ss_pred ccccccccCCcccchhHHHHHHHHHHHHHhCC
Confidence 1224567899999999988764
No 63
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.94 E-value=7.2e-27 Score=241.42 Aligned_cols=300 Identities=17% Similarity=0.218 Sum_probs=189.2
Q ss_pred CcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
+||+|||||++|+++|..|++. |.+|+|||+++.++..... .+ .+..-... . ....++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-~~-----------~~~~g~~~-----~-~~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCG-IA-----------LYLGKEIK-----N-NDPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGG-HH-----------HHHTTCBG-----G-GCGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccccc-ch-----------hhhcCCcc-----c-CCHHHhhh
Confidence 4899999999999999999998 9999999998865421110 00 00000000 0 00011111
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
++...++++++ .++++++|..++... ..|++.+..+++..++.||+||+|||+
T Consensus 63 ~~~~~~~~~gv--~~~~~~~v~~i~~~~------------------------~~v~v~~~~~g~~~~~~~d~lviAtGs- 115 (452)
T 2cdu_A 63 SSPEELSNLGA--NVQMRHQVTNVDPET------------------------KTIKVKDLITNEEKTEAYDKLIMTTGS- 115 (452)
T ss_dssp CCHHHHHHTTC--EEEESEEEEEEEGGG------------------------TEEEEEETTTCCEEEEECSEEEECCCE-
T ss_pred cCHHHHHHcCC--EEEeCCEEEEEEcCC------------------------CEEEEEecCCCceEEEECCEEEEccCC-
Confidence 22334456777 788899999998654 235555422233467999999999994
Q ss_pred CCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccce
Q 009917 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHW 241 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~ 241 (522)
.|..|++| |.+. . .++++..+.+.... ......+++|+|||+|.+|+|+|..++..+. +||++.|.+.
T Consensus 116 --~p~~p~i~---g~~~-~-~v~~~~~~~~~~~~-~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~- 183 (452)
T 2cdu_A 116 --KPTVPPIP---GIDS-S-RVYLCKNYNDAKKL-FEEAPKAKTITIIGSGYIGAELAEAYSNQNY---NVNLIDGHER- 183 (452)
T ss_dssp --EECCCCCT---TTTS-T-TEEECSSHHHHHHH-HHHGGGCSEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSS-
T ss_pred --CcCCCCCC---CCCC-C-CEEEeCcHHHHHHH-HHHhccCCeEEEECcCHHHHHHHHHHHhcCC---EEEEEEcCCc-
Confidence 57788888 6643 2 36665554332110 1123468999999999999999999998764 4999999876
Q ss_pred eecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccccccc
Q 009917 242 NIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSC 321 (522)
Q Consensus 242 ~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 321 (522)
++|+.. +..+ ..
T Consensus 184 ~l~~~~------~~~~--------------------------------~~------------------------------ 195 (452)
T 2cdu_A 184 VLYKYF------DKEF--------------------------------TD------------------------------ 195 (452)
T ss_dssp TTTTTS------CHHH--------------------------------HH------------------------------
T ss_pred hhhhhh------hhhH--------------------------------HH------------------------------
Confidence 444211 0000 00
Q ss_pred ceeccCCcccccccCCcEEEeecC-ceeEec-Cc-E--EEcCCCceecccEEEEecCCCCCcccccccccccccccccCC
Q 009917 322 LTITVPEKFYDKVEEGSIILKKSQ-DFSFCE-DG-I--VVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGS 396 (522)
Q Consensus 322 ~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~-~g-v--~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~ 396 (522)
.+.+.+++.+|+++.+. +.++.. ++ + +..+|++ +++|.||+|||++|+..+++.. + .-+
T Consensus 196 -------~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~-i~~D~vv~a~G~~p~~~ll~~~----l----~~~ 259 (452)
T 2cdu_A 196 -------ILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKE-IKSDIAILCIGFRPNTELLKGK----V----AML 259 (452)
T ss_dssp -------HHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCE-EEESEEEECCCEEECCGGGTTT----S----CBC
T ss_pred -------HHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCE-EECCEEEECcCCCCCHHHHHHh----h----hcC
Confidence 01122334456666664 666654 33 3 3347877 9999999999999997653321 1 101
Q ss_pred CCCCcccceeecCCCCCceEEEcccCCc-----------chhhhHHHHHHHHHHHHcCCC
Q 009917 397 PTEKLPLYREIIHPQIPQLAIIGFSESI-----------SNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 397 ~~~~~~ly~~~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~ia~~l~g~~ 445 (522)
+.+.+..... +.++.||+|++|.+... ...+.+..|++.+|..+.|..
T Consensus 260 ~~G~i~Vd~~-~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 318 (452)
T 2cdu_A 260 DNGAIITDEY-MHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDK 318 (452)
T ss_dssp TTSCBCCCTT-SBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCC
T ss_pred CCCCEEECCC-cCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCC
Confidence 2232333332 34589999999966542 245789999999999998753
No 64
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=1.3e-26 Score=239.76 Aligned_cols=304 Identities=12% Similarity=0.158 Sum_probs=186.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce----eecCCCCCCCCCCCCCCh
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDFPDH 76 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (522)
++||+|||||++|+++|..|++.|++|+|||++ .+||+|.. +.|...+......+ .+..+..+.. ... ...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~~-~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAE-NVT-IDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECC-SCE-ECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccC-CCc-cCH
Confidence 479999999999999999999999999999998 89999865 33332211100000 0000000000 000 011
Q ss_pred h-----------HHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCc
Q 009917 77 N-----------QVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHS 145 (522)
Q Consensus 77 ~-----------~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~ 145 (522)
. .+.+++...+++.++ .+..++.+. ++ . +.+.|+..++ .
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-id--~----------------------~~v~V~~~~G---~ 129 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKV--EIVKGEAYF-VD--A----------------------NTVRVVNGDS---A 129 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEESEEEE-EE--T----------------------TEEEEEETTE---E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEEE-cc--C----------------------CeEEEEeCCC---c
Confidence 1 133445566667777 666665443 32 1 2366665432 1
Q ss_pred eeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhh
Q 009917 146 TEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTA 225 (522)
Q Consensus 146 ~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~ 225 (522)
+++.||+||+|||+ .|..|+++ |.+. .++++.+.... ...+|+|+|||+|.+|+|+|..|++.
T Consensus 130 -~~i~~d~lViATGs---~p~~~~~~---g~~~---~v~~~~~~~~~-------~~~~~~vvViGgG~~g~e~A~~l~~~ 192 (455)
T 1ebd_A 130 -QTYTFKNAIIATGS---RPIELPNF---KFSN---RILDSTGALNL-------GEVPKSLVVIGGGYIGIELGTAYANF 192 (455)
T ss_dssp -EEEECSEEEECCCE---EECCBTTB---CCCS---SEECHHHHHTC-------SSCCSEEEEECCSHHHHHHHHHHHHT
T ss_pred -EEEEeCEEEEecCC---CCCCCCCC---Cccc---eEecHHHHhcc-------ccCCCeEEEECCCHHHHHHHHHHHHc
Confidence 56899999999995 56777777 6443 25665544332 13579999999999999999999987
Q ss_pred cCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccc
Q 009917 226 NGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAK 305 (522)
Q Consensus 226 ~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (522)
+. +|+++.|.+. ++|... ..+ ...
T Consensus 193 g~---~Vtlv~~~~~-~l~~~~-------~~~--------------------------------~~~------------- 216 (455)
T 1ebd_A 193 GT---KVTILEGAGE-ILSGFE-------KQM--------------------------------AAI------------- 216 (455)
T ss_dssp TC---EEEEEESSSS-SSTTSC-------HHH--------------------------------HHH-------------
T ss_pred CC---cEEEEEcCCc-cccccC-------HHH--------------------------------HHH-------------
Confidence 65 4999999876 444322 000 000
Q ss_pred cCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC--cE--EEc---CCCceecccEEEEecCCCCC
Q 009917 306 FGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--GI--VVD---GQTTPLKTDLVILATGFKGD 377 (522)
Q Consensus 306 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~--gv--~~~---dG~~~~~~D~VI~aTG~~~~ 377 (522)
+.+.+++.+|+++.+. +.++..+ ++ .++ ++++ +++|.||+|||++|+
T Consensus 217 ------------------------l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~-~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 217 ------------------------IKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKT-IDADYVLVTVGRRPN 271 (455)
T ss_dssp ------------------------HHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEE-EEESEEEECSCEEES
T ss_pred ------------------------HHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeE-EEcCEEEECcCCCcc
Confidence 1112233345555553 5566432 23 343 4456 899999999999998
Q ss_pred cccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCCc-chhhhHHHHHHHHHHHHcCC
Q 009917 378 VKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSESI-SNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 378 ~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~ia~~l~g~ 444 (522)
.+++. +++.... ++.+.+..... +.++.||+|++|.+... ...+.+..|++.+|..+.|.
T Consensus 272 ~~~l~------~~~~g~~~~~~G~i~vd~~-~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (455)
T 1ebd_A 272 TDELG------LEQIGIKMTNRGLIEVDQQ-CRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGH 333 (455)
T ss_dssp CSSSS------TTTTTCCBCTTSCBCCCTT-CBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTSC
T ss_pred cCcCC------hhhcCCccCCCCCEeeCCC-cccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 76521 0110010 12232333333 44689999999976543 34677899999999999875
No 65
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.94 E-value=2.7e-27 Score=244.85 Aligned_cols=303 Identities=14% Similarity=0.151 Sum_probs=184.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccceee---cCCCCCCCCCCCCCChhH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQF---SDYPWPDSVTTDFPDHNQ 78 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 78 (522)
+||+|||||++|+++|..|++.|.+|+|||+++.+||+|.. +.|...+......+.. ..+.++.. .......+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~--~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVK--GVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEEC--CEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccC--CCccCHHH
Confidence 68999999999999999999999999999999899999986 4454322111110000 11111000 00011223
Q ss_pred HHHH-----------HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCcee
Q 009917 79 VLDY-----------IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTE 147 (522)
Q Consensus 79 ~~~y-----------l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~ 147 (522)
+..+ +..++++.++ .+..++.+ .+ + .+.+.|+. ++ .
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~~-~i---~---------------------~~~~~v~~-~g-----~ 126 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGI--ARHQGTAR-FL---S---------------------ERKVLVEE-TG-----E 126 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCEE-ES---S---------------------SSEEEETT-TC-----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEE-Ee---c---------------------CCeEEEee-CC-----E
Confidence 2222 3444555566 55555432 21 1 12244432 22 5
Q ss_pred EEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcC
Q 009917 148 VHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANG 227 (522)
Q Consensus 148 ~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~ 227 (522)
++.||+||+|||+ .|..|+++ |.+. ..++++.++... ...+|+|+|||+|.+|+|+|..|++.+.
T Consensus 127 ~~~~d~lviAtG~---~p~~~~~~---g~~~--~~v~~~~~~~~~-------~~~~~~vvIiGgG~~g~e~A~~l~~~g~ 191 (455)
T 2yqu_A 127 ELEARYILIATGS---APLIPPWA---QVDY--ERVVTSTEALSF-------PEVPKRLIVVGGGVIGLELGVVWHRLGA 191 (455)
T ss_dssp EEEEEEEEECCCE---EECCCTTB---CCCS--SSEECHHHHTCC-------SSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEecEEEECCCC---CCCCCCCC---CCCc--CcEechHHhhcc-------ccCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 7899999999995 56777777 5432 136666655442 1357999999999999999999998765
Q ss_pred CCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccC
Q 009917 228 LENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFG 307 (522)
Q Consensus 228 ~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (522)
+|+++.+++. ++|... ..+ .+.
T Consensus 192 ---~V~lv~~~~~-~l~~~~-------~~~--------------------------------~~~--------------- 213 (455)
T 2yqu_A 192 ---EVIVLEYMDR-ILPTMD-------LEV--------------------------------SRA--------------- 213 (455)
T ss_dssp ---EEEEECSSSS-SCTTSC-------HHH--------------------------------HHH---------------
T ss_pred ---EEEEEecCCc-cccccC-------HHH--------------------------------HHH---------------
Confidence 4999999876 444322 000 000
Q ss_pred CCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEec--Cc--EEEcCCCceecccEEEEecCCCCCccccc
Q 009917 308 MVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DG--IVVDGQTTPLKTDLVILATGFKGDVKLKN 382 (522)
Q Consensus 308 l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~g--v~~~dG~~~~~~D~VI~aTG~~~~~~l~~ 382 (522)
+.+.+++.+|+++.+. +.+++. ++ +.+++|++ +++|.||+|||++++..++.
T Consensus 214 ----------------------l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~-i~~D~vv~A~G~~p~~~~l~ 270 (455)
T 2yqu_A 214 ----------------------AERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEV-LEADRVLVAVGRRPYTEGLS 270 (455)
T ss_dssp ----------------------HHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCE-EEESEEEECSCEEECCTTCC
T ss_pred ----------------------HHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeE-EEcCEEEECcCCCcCCCCCC
Confidence 0111222345555543 556643 22 45568877 99999999999999865421
Q ss_pred ccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCCc-chhhhHHHHHHHHHHHHcCC
Q 009917 383 IFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSESI-SNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 383 ~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~ia~~l~g~ 444 (522)
++..... ...+.+.+... +.++.||+|++|.+... ...+.+..|++.+|..+.|.
T Consensus 271 ------~~~~g~~~~~~g~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 327 (455)
T 2yqu_A 271 ------LENAGLSTDERGRIPVDEH-LRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRG 327 (455)
T ss_dssp ------GGGGTCCCCTTSCCCCCTT-SBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred ------hhhcCCccCCCCcEeECCC-cccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCC
Confidence 1110110 11222333332 44678999999976543 34567899999999998765
No 66
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.94 E-value=1.3e-26 Score=241.37 Aligned_cols=308 Identities=14% Similarity=0.152 Sum_probs=191.4
Q ss_pred CCCCcEEEECCChhHHHHHHHHHh-cCCceEEEe--------cCCCccccccc--cccceeecCCccce----eecCCCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLL-KGFHPIVFE--------ARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPW 65 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~-~g~~v~i~e--------~~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~ 65 (522)
|.++||+|||||++|+++|..|++ .|++|+||| +...+||+|.+ ++|...+..+...+ .+..+.+
T Consensus 1 ~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~ 80 (490)
T 1fec_A 1 SRAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGW 80 (490)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTE
T ss_pred CccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCc
Confidence 346899999999999999999999 999999999 35689999986 55654332221111 0111111
Q ss_pred CCCCCC-CCCChhHHHHHH-----------HHHHHhc-CCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCC
Q 009917 66 PDSVTT-DFPDHNQVLDYI-----------QSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRG 132 (522)
Q Consensus 66 ~~~~~~-~~~~~~~~~~yl-----------~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (522)
... .. ......++.++. ....++. ++ .+..+ ++..++.
T Consensus 81 ~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g-~~~~i~~------------------------- 131 (490)
T 1fec_A 81 ELD-RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGL--TFHQG-FGALQDN------------------------- 131 (490)
T ss_dssp ECC-GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTE--EEEES-EEEEEET-------------------------
T ss_pred ccC-CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--EEEEe-EEEEeeC-------------------------
Confidence 100 00 001223333332 2333444 55 44444 3555432
Q ss_pred cEEEEEecC--CCCc-eeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEE
Q 009917 133 KWTVAVEDA--KNHS-TEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVV 209 (522)
Q Consensus 133 ~~~v~~~~~--~~g~-~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVI 209 (522)
.+|++.+. .+|+ .+++.||+||+|||+ .|..|.+| |.+. ++++.++... ...+++|+||
T Consensus 132 -~~v~v~~~~~~~g~~~~~~~~d~lviAtGs---~p~~p~i~---g~~~----~~~~~~~~~~-------~~~~~~vvVi 193 (490)
T 1fec_A 132 -HTVLVRESADPNSAVLETLDTEYILLATGS---WPQHLGIE---GDDL----CITSNEAFYL-------DEAPKRALCV 193 (490)
T ss_dssp -TEEEEESSSSTTSCEEEEEEEEEEEECCCE---EECCCCSB---TGGG----CBCHHHHTTC-------SSCCSEEEEE
T ss_pred -CEEEEEeeccCCCCceEEEEcCEEEEeCCC---CCCCCCCC---Cccc----eecHHHHhhh-------hhcCCeEEEE
Confidence 13555420 1132 257999999999994 57788787 6632 3444444332 2357999999
Q ss_pred cCCCCHHHHHHHHhhh---cCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhH
Q 009917 210 GLQKSALDIAMECTTA---NGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLR 286 (522)
Q Consensus 210 G~G~sg~dia~~l~~~---~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (522)
|+|.+|+|+|..|+.. +. +||++.|.+. ++|..+ ..+
T Consensus 194 GgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~-~l~~~d-------~~~----------------------------- 233 (490)
T 1fec_A 194 GGGYISIEFAGIFNAYKARGG---QVDLAYRGDM-ILRGFD-------SEL----------------------------- 233 (490)
T ss_dssp CSSHHHHHHHHHHHHHSCTTC---EEEEEESSSS-SSTTSC-------HHH-----------------------------
T ss_pred CCCHHHHHHHHHHHhhccCcC---eEEEEEcCCC-cccccC-------HHH-----------------------------
Confidence 9999999999999988 64 5999999886 445432 000
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC-----cEEEcCCC
Q 009917 287 WAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDGQT 360 (522)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----gv~~~dG~ 360 (522)
. ..+.+.+++.+|+++.+. +.++..+ .|+++||+
T Consensus 234 ---~-------------------------------------~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~ 273 (490)
T 1fec_A 234 ---R-------------------------------------KQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGA 273 (490)
T ss_dssp ---H-------------------------------------HHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSC
T ss_pred ---H-------------------------------------HHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCc
Confidence 0 001123344567777664 6777543 36778898
Q ss_pred ceecccEEEEecCCCCCccc--ccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHH
Q 009917 361 TPLKTDLVILATGFKGDVKL--KNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWL 437 (522)
Q Consensus 361 ~~~~~D~VI~aTG~~~~~~l--~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~i 437 (522)
+ +++|.||+|||++++... ++... + .-++.+.+..... +.++.||+|++|.+.. +...+.+..|++.+
T Consensus 274 ~-i~~D~vv~a~G~~p~~~~L~l~~~g---l----~~~~~G~I~Vd~~-~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~a 344 (490)
T 1fec_A 274 E-ADYDVVMLAIGRVPRSQTLQLEKAG---V----EVAKNGAIKVDAY-SKTNVDNIYAIGDVTDRVMLTPVAINEGAAF 344 (490)
T ss_dssp E-EEESEEEECSCEEESCTTSCGGGGT---C----CBCTTSCBCCCTT-CBCSSTTEEECGGGGCSCCCHHHHHHHHHHH
T ss_pred E-EEcCEEEEccCCCcCccccCchhcC---c----cCCCCCCEEECCC-CccCCCCEEEEeccCCCccCHHHHHHHHHHH
Confidence 7 999999999999998752 12111 0 0012233333332 3468999999997655 34567899999999
Q ss_pred HHHHcCC
Q 009917 438 AELLDGA 444 (522)
Q Consensus 438 a~~l~g~ 444 (522)
+..+.|.
T Consensus 345 a~~i~g~ 351 (490)
T 1fec_A 345 VDTVFAN 351 (490)
T ss_dssp HHHHHSS
T ss_pred HHHhcCC
Confidence 9988764
No 67
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.94 E-value=9.9e-27 Score=242.07 Aligned_cols=309 Identities=14% Similarity=0.087 Sum_probs=187.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC------Cccccccc--cccceeecCCcccee-----ecCCCCCCC
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS------DIGGAWIK--TVETTMLQTPKQLYQ-----FSDYPWPDS 68 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~------~~Gg~w~~--~~~~~~~~~~~~~~~-----~~~~~~~~~ 68 (522)
.++||+|||||++|+++|..|++.|++|+|||+++ .+||+|.. +.|...+......+. +..+.+..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~- 80 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIST- 80 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEEC-
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCccc-
Confidence 45899999999999999999999999999999986 47777765 444433221111110 11111110
Q ss_pred CCCCCCChhHHHHHHH-----------HHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEE
Q 009917 69 VTTDFPDHNQVLDYIQ-----------SYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (522)
Q Consensus 69 ~~~~~~~~~~~~~yl~-----------~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (522)
.........+.++.. ...++.++ .+..++ +..+ . .+.+.|.
T Consensus 81 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g~-~~~~---~---------------------~~~~~v~ 132 (476)
T 3lad_A 81 -GEVAIDVPTMIARKDQIVRNLTGGVASLIKANGV--TLFEGH-GKLL---A---------------------GKKVEVT 132 (476)
T ss_dssp -SCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESE-EEEC---S---------------------TTCEEEE
T ss_pred -CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEe---c---------------------CCEEEEE
Confidence 011112233333332 23334444 333332 2221 1 1335565
Q ss_pred EecCCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHH
Q 009917 138 VEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (522)
Q Consensus 138 ~~~~~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~d 217 (522)
..+ |+.+++.||+||+|||+ .|..|+.+ +.+ ...++|+.++... ...+++|+|||+|.+|+|
T Consensus 133 ~~~---g~~~~~~~d~lvlAtG~---~p~~~~~~---~~~--~~~v~~~~~~~~~-------~~~~~~v~ViGgG~~g~e 194 (476)
T 3lad_A 133 AAD---GSSQVLDTENVILASGS---KPVEIPPA---PVD--QDVIVDSTGALDF-------QNVPGKLGVIGAGVIGLE 194 (476)
T ss_dssp CTT---SCEEEECCSCEEECCCE---EECCCTTS---CCC--SSSEEEHHHHTSC-------SSCCSEEEEECCSHHHHH
T ss_pred cCC---CceEEEEcCEEEEcCCC---CCCCCCCC---CCC--cccEEechhhhcc-------ccCCCeEEEECCCHHHHH
Confidence 433 44467999999999995 45555433 322 1236666655442 246899999999999999
Q ss_pred HHHHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHH
Q 009917 218 IAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADI 297 (522)
Q Consensus 218 ia~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (522)
+|..++..+. +||++.|.+. ++|... ..+
T Consensus 195 ~A~~l~~~g~---~Vtlv~~~~~-~l~~~~-------~~~---------------------------------------- 223 (476)
T 3lad_A 195 LGSVWARLGA---EVTVLEAMDK-FLPAVD-------EQV---------------------------------------- 223 (476)
T ss_dssp HHHHHHHTTC---EEEEEESSSS-SSTTSC-------HHH----------------------------------------
T ss_pred HHHHHHHcCC---cEEEEecCCC-cCcccC-------HHH----------------------------------------
Confidence 9999998865 4999999886 444322 000
Q ss_pred hhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCc----EEEcCC---CceecccEEE
Q 009917 298 KKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVDGQ---TTPLKTDLVI 369 (522)
Q Consensus 298 ~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g----v~~~dG---~~~~~~D~VI 369 (522)
.+.+.+.+++.+|+++.+. +.++..++ +++.++ ++ +++|.||
T Consensus 224 -----------------------------~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~-~~~D~vi 273 (476)
T 3lad_A 224 -----------------------------AKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKS-QAFDKLI 273 (476)
T ss_dssp -----------------------------HHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEE-EEESEEE
T ss_pred -----------------------------HHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEE-EECCEEE
Confidence 0011123445567777664 66665332 566654 45 8999999
Q ss_pred EecCCCCCcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCCC
Q 009917 370 LATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 370 ~aTG~~~~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~~ 445 (522)
+|||++|+...+. ++..... ++.+.+.... .+.++.||||++|.+.. +...+.+..|++.++..+.|+.
T Consensus 274 ~a~G~~p~~~~l~------~~~~g~~~~~~G~i~vd~-~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 274 VAVGRRPVTTDLL------AADSGVTLDERGFIYVDD-YCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHK 344 (476)
T ss_dssp ECSCEEECCTTCC------SSCCSCCBCTTSCBCCCT-TSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeCCcccCCCCC------ccccCccccCCCCEeeCC-CcccCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 9999999865321 0110010 1222233322 24478999999997653 4456789999999999987753
No 68
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.94 E-value=7.1e-27 Score=243.40 Aligned_cols=300 Identities=14% Similarity=0.126 Sum_probs=185.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccc----eeecCCCCCCCCCCCCCCh
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQL----YQFSDYPWPDSVTTDFPDH 76 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 76 (522)
++||+|||||++|+++|..|++.|++|+|||+ +.+||+|.. ++|...+..+... ..+..+.+... ......
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 102 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYA--DPIFNW 102 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCC--CCEECH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccC--CCccCH
Confidence 46999999999999999999999999999999 689999886 5554332221111 11111211110 001122
Q ss_pred hH-----------HHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEe-cCCCC
Q 009917 77 NQ-----------VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVE-DAKNH 144 (522)
Q Consensus 77 ~~-----------~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~g 144 (522)
.. +..++....++.++ .+..+ ++..++. +.+++. ++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~i~~--------------------------~~v~v~~~~--- 150 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNV--HIYES-RAVFVDE--------------------------HTLELSVTG--- 150 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEEET--------------------------TEEEETTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEeeC--------------------------CEEEEecCC---
Confidence 22 22333444444554 33333 4444432 245554 33
Q ss_pred ceeEEEeCEEEEeecccCCCCC-CCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHh
Q 009917 145 STEVHQVDFVILCVGRFSDVPN-IPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECT 223 (522)
Q Consensus 145 ~~~~~~~d~lvvAtG~~s~~p~-~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~ 223 (522)
.++.||+||+|||. .|. .|.+| |.+. ++++.++.. ....+++|+|||+|.+|+|+|..++
T Consensus 151 --~~~~~d~lviAtG~---~p~~~p~i~---G~~~----~~~~~~~~~-------~~~~~~~v~ViGgG~~g~e~A~~l~ 211 (484)
T 3o0h_A 151 --ERISAEKILIATGA---KIVSNSAIK---GSDL----CLTSNEIFD-------LEKLPKSIVIVGGGYIGVEFANIFH 211 (484)
T ss_dssp --CEEEEEEEEECCCE---EECCC--CB---TGGG----SBCTTTGGG-------CSSCCSEEEEECCSHHHHHHHHHHH
T ss_pred --eEEEeCEEEEccCC---CcccCCCCC---Cccc----cccHHHHHh-------HHhcCCcEEEECcCHHHHHHHHHHH
Confidence 57999999999995 466 77777 7552 333333332 2245899999999999999999999
Q ss_pred hhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccc
Q 009917 224 TANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (522)
Q Consensus 224 ~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (522)
..+. +|+++.|.+. ++|... ..+ ..
T Consensus 212 ~~g~---~Vtli~~~~~-~l~~~~-------~~~--------------------------------~~------------ 236 (484)
T 3o0h_A 212 GLGV---KTTLLHRGDL-ILRNFD-------YDL--------------------------------RQ------------ 236 (484)
T ss_dssp HTTC---EEEEECSSSS-SSTTSC-------HHH--------------------------------HH------------
T ss_pred HcCC---eEEEEECCCc-cccccC-------HHH--------------------------------HH------------
Confidence 8765 4999999876 344322 000 00
Q ss_pred cccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC----cEEEcCCCceecccEEEEecCCCCCc
Q 009917 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVDGQTTPLKTDLVILATGFKGDV 378 (522)
Q Consensus 304 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----gv~~~dG~~~~~~D~VI~aTG~~~~~ 378 (522)
.+.+.+++.+|+++.+. +.++..+ .|++++|++ +++|.||+|||++++.
T Consensus 237 -------------------------~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~-i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 237 -------------------------LLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQT-ICADRVMLATGRVPNT 290 (484)
T ss_dssp -------------------------HHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCE-EEESEEEECCCEEECC
T ss_pred -------------------------HHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcE-EEcCEEEEeeCCCcCC
Confidence 01122233345666543 6666544 377889987 9999999999999987
Q ss_pred ccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCC
Q 009917 379 KLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 379 ~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
.++.. ...... ++.+.+... ..+.++.||||++|.+.. +...+.+..|++.++..+.|.
T Consensus 291 ~~l~l------~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 291 TGLGL------ERAGVKVNEFGAVVVD-EKMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp TTCCH------HHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCh------hhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCC
Confidence 64221 100010 122223232 234478999999997655 445678999999999988774
No 69
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.94 E-value=1.4e-26 Score=241.14 Aligned_cols=308 Identities=18% Similarity=0.244 Sum_probs=186.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecC-------C--Cccccccc--cccceeecCCccce----eecCCCCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR-------S--DIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPD 67 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~-------~--~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~~~ 67 (522)
.+||+|||||++|+++|..|++.|++|+|||+. . .+||+|.+ +.|...+..+...+ ....+.+..
T Consensus 9 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 88 (483)
T 3dgh_A 9 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNV 88 (483)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 479999999999999999999999999999942 1 38999987 56654432222111 011111111
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcCC-------ccceEe-eeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEe
Q 009917 68 SVTTDFPDHNQVLDYIQSYASHFDL-------RKHIKF-NRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVE 139 (522)
Q Consensus 68 ~~~~~~~~~~~~~~yl~~~~~~~~l-------~~~i~~-~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 139 (522)
. .........+.++...+.+.+.. ...+.+ ...+..++. ..+.|...
T Consensus 89 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~------------------------~~v~v~~~ 143 (483)
T 3dgh_A 89 D-DKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDS------------------------HTLLAKLK 143 (483)
T ss_dssp C-CCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEET------------------------TEEEEECT
T ss_pred C-CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccC------------------------CEEEEEeC
Confidence 0 11233456666666655443310 001211 222222221 22445433
Q ss_pred cCCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHH
Q 009917 140 DAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIA 219 (522)
Q Consensus 140 ~~~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia 219 (522)
++ . +++.||+||+||| +.|..|++| |.+.+ .+++.++... ...+++|+|||+|.+|+|+|
T Consensus 144 ~g---~-~~~~~d~lviATG---s~p~~p~i~---G~~~~---~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A 203 (483)
T 3dgh_A 144 SG---E-RTITAQTFVIAVG---GRPRYPDIP---GAVEY---GITSDDLFSL-------DREPGKTLVVGAGYIGLECA 203 (483)
T ss_dssp TC---C-EEEEEEEEEECCC---EEECCCSST---THHHH---CBCHHHHTTC-------SSCCCEEEEECCSHHHHHHH
T ss_pred CC---e-EEEEcCEEEEeCC---CCcCCCCCC---Ccccc---cCcHHHHhhh-------hhcCCcEEEECCCHHHHHHH
Confidence 32 2 5799999999999 467888888 76542 3455444432 24578999999999999999
Q ss_pred HHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhh
Q 009917 220 MECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKK 299 (522)
Q Consensus 220 ~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (522)
..++..+. +||++.|.. ++|..+ .-+ ...
T Consensus 204 ~~l~~~g~---~Vtlv~~~~--~l~~~d-------~~~--------------------------------~~~------- 232 (483)
T 3dgh_A 204 GFLKGLGY---EPTVMVRSI--VLRGFD-------QQM--------------------------------AEL------- 232 (483)
T ss_dssp HHHHHTTC---EEEEEESSC--SSTTSC-------HHH--------------------------------HHH-------
T ss_pred HHHHHcCC---EEEEEeCCC--CCcccC-------HHH--------------------------------HHH-------
Confidence 99999865 499999843 344322 000 000
Q ss_pred hccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEec--Cc---EEEcCCC-----ceecccEE
Q 009917 300 KHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DG---IVVDGQT-----TPLKTDLV 368 (522)
Q Consensus 300 ~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~g---v~~~dG~-----~~~~~D~V 368 (522)
+.+.+++.+|+++.+. +.++.. ++ |++.+|. + +++|.|
T Consensus 233 ------------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~-~~~D~v 281 (483)
T 3dgh_A 233 ------------------------------VAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESE-DVYDTV 281 (483)
T ss_dssp ------------------------------HHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEE-EEESEE
T ss_pred ------------------------------HHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeE-EEcCEE
Confidence 1112233345555553 555543 22 6666654 4 899999
Q ss_pred EEecCCCCCcccccccccccccccccCCCCCCcccceeecCCCCCceEEEcccC-C-cchhhhHHHHHHHHHHHHcCC
Q 009917 369 ILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSE-S-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 369 I~aTG~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~-~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
|+|||++|+..++.. .+.......+.+.+... +.++.||||++|.+. . +...+.+..|++.++..+.|.
T Consensus 282 i~a~G~~p~~~~l~l------~~~gl~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 282 LWAIGRKGLVDDLNL------PNAGVTVQKDKIPVDSQ-EATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp EECSCEEECCGGGTG------GGTTCCCBTTBBCCCTT-CBCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred EECcccccCcCcCCc------hhcCccccCCEEEECcC-CccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 999999998765421 11111111133333332 357899999999764 2 445678999999999988775
No 70
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.94 E-value=2.2e-26 Score=237.43 Aligned_cols=296 Identities=16% Similarity=0.181 Sum_probs=187.6
Q ss_pred CcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
+||+|||||++|+++|..|++. |.+|+|||+++.+|.... ..+ .+.. ..+...+++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-~~~-----------~~~~--------~~~~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSA-GMQ-----------LYLE--------GKVKDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGG-GHH-----------HHHT--------TSSCCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccc-cch-----------hhhc--------CccCCHHHhhc
Confidence 4899999999999999999997 899999999887652100 000 0000 00011122222
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
++.+..+++++ .+.++++|..++... ..|++.+..+|+..++.||+||+|||+
T Consensus 61 ~~~~~~~~~gv--~~~~~~~v~~i~~~~------------------------~~v~~~~~~~g~~~~~~~d~lviAtG~- 113 (447)
T 1nhp_A 61 MTGEKMESRGV--NVFSNTEITAIQPKE------------------------HQVTVKDLVSGEERVENYDKLIISPGA- 113 (447)
T ss_dssp CCHHHHHHTTC--EEEETEEEEEEETTT------------------------TEEEEEETTTCCEEEEECSEEEECCCE-
T ss_pred CCHHHHHHCCC--EEEECCEEEEEeCCC------------------------CEEEEEecCCCceEEEeCCEEEEcCCC-
Confidence 23344456677 788899999998654 245555422244456899999999994
Q ss_pred CCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhc--cCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANL--VKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~--~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
.|..|++| |.+. . .++|+..+.+.... .... ..+++|+|||+|.+|+|+|..+++.+. +|+++.|.+
T Consensus 114 --~p~~p~i~---G~~~-~-~v~~~~~~~~~~~l-~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~---~Vtlv~~~~ 182 (447)
T 1nhp_A 114 --VPFELDIP---GKDL-D-NIYLMRGRQWAIKL-KQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK---KVTVIDILD 182 (447)
T ss_dssp --EECCCCST---TTTS-B-SEECCCHHHHHHHH-HHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSS
T ss_pred --CcCCCCCC---CCCC-C-CeEEECCHHHHHHH-HHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCC---eEEEEecCc
Confidence 57888888 7652 2 36665554331100 0111 278999999999999999999998765 499999987
Q ss_pred ceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccccc
Q 009917 240 HWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELS 319 (522)
Q Consensus 240 ~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 319 (522)
. ++++.. +.. +.
T Consensus 183 ~-~l~~~~------~~~--------------------------------~~----------------------------- 194 (447)
T 1nhp_A 183 R-PLGVYL------DKE--------------------------------FT----------------------------- 194 (447)
T ss_dssp S-TTTTTC------CHH--------------------------------HH-----------------------------
T ss_pred c-cccccC------CHH--------------------------------HH-----------------------------
Confidence 5 333211 000 00
Q ss_pred ccceeccCCcccccccCCcEEEeecC-ceeEecCc----EEEcCCCceecccEEEEecCCCCCccccccccccccccccc
Q 009917 320 SCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLA 394 (522)
Q Consensus 320 ~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g----v~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~ 394 (522)
+.+.+.+++.+|+++.+. +.++..++ +.+ +|++ +++|.||+|||++++..+++.. +. .
T Consensus 195 --------~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~-i~~d~vi~a~G~~p~~~~~~~~----~~---~ 257 (447)
T 1nhp_A 195 --------DVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNA-YDADLVVVAVGVRPNTAWLKGT----LE---L 257 (447)
T ss_dssp --------HHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCE-EECSEEEECSCEEESCGGGTTT----SC---B
T ss_pred --------HHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCE-EECCEEEECcCCCCChHHHHhh----hh---h
Confidence 011123445567777764 77776542 444 6666 9999999999999987653321 10 0
Q ss_pred CCCCCCcccceeecCCCCCceEEEcccCCc-----------chhhhHHHHHHHHHHHHcCC
Q 009917 395 GSPTEKLPLYREIIHPQIPQLAIIGFSESI-----------SNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 395 ~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~ia~~l~g~ 444 (522)
+..+.+..... +.++.||+|++|.+... ...+.+..|++.++..+.|.
T Consensus 258 -~~~G~i~Vd~~-~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 316 (447)
T 1nhp_A 258 -HPNGLIKTDEY-MRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEP 316 (447)
T ss_dssp -CTTSCBCCCTT-CBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSC
T ss_pred -cCCCcEEECcc-ccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCC
Confidence 12222322222 34578999999966531 23567999999999999875
No 71
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.94 E-value=1.8e-26 Score=240.64 Aligned_cols=311 Identities=17% Similarity=0.193 Sum_probs=187.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEec--------CCCccccccc--cccceeecCCccce----eecCCCCCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEA--------RSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDS 68 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~--------~~~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~ 68 (522)
++||+|||||++|+++|..|++.|++|+|||+ ...+||+|.+ |+|...+..+...+ ....+.+...
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~ 85 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVA 85 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccC
Confidence 37999999999999999999999999999997 5679999987 66655442222111 1112222211
Q ss_pred CCCCCCChhHHHHHHHHHHHhcCC-------ccceE-eeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEec
Q 009917 69 VTTDFPDHNQVLDYIQSYASHFDL-------RKHIK-FNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVED 140 (522)
Q Consensus 69 ~~~~~~~~~~~~~yl~~~~~~~~l-------~~~i~-~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 140 (522)
.........+.++...+.+++.. ...+. +..++..++ . +.+.+..
T Consensus 86 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~------------------------~--~~v~v~~ 138 (488)
T 3dgz_A 86 -QPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVD------------------------E--HTVRGVD 138 (488)
T ss_dssp -SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESS------------------------S--SEEEEEC
T ss_pred -CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEcc------------------------C--CeEEEEe
Confidence 12234455666665555443210 00111 122222211 1 2344433
Q ss_pred CCCCceeEEEeCEEEEeecccCCCCCCCC-CCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHH
Q 009917 141 AKNHSTEVHQVDFVILCVGRFSDVPNIPE-FPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIA 219 (522)
Q Consensus 141 ~~~g~~~~~~~d~lvvAtG~~s~~p~~P~-~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia 219 (522)
. +|+..++.||+||+|||+ .|..|+ +| |.+.+ .+++.++..+ ...+++|+|||+|.+|+|+|
T Consensus 139 ~-~g~~~~~~~d~lViATGs---~p~~p~~i~---G~~~~---~~~~~~~~~~-------~~~~~~vvViGgG~ig~E~A 201 (488)
T 3dgz_A 139 K-GGKATLLSAEHIVIATGG---RPRYPTQVK---GALEY---GITSDDIFWL-------KESPGKTLVVGASYVALECA 201 (488)
T ss_dssp T-TSCEEEEEEEEEEECCCE---EECCCSSCB---THHHH---CBCHHHHTTC-------SSCCCSEEEECCSHHHHHHH
T ss_pred C-CCceEEEECCEEEEcCCC---CCCCCCCCC---Ccccc---cCcHHHHHhh-------hhcCCeEEEECCCHHHHHHH
Confidence 2 244568999999999994 678887 88 76432 3455444432 24578899999999999999
Q ss_pred HHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhh
Q 009917 220 MECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKK 299 (522)
Q Consensus 220 ~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (522)
..++..+.+ ||++.|++ ++|..+ ..+ .+.
T Consensus 202 ~~l~~~g~~---Vtlv~~~~--~l~~~d-------~~~--------------------------------~~~------- 230 (488)
T 3dgz_A 202 GFLTGIGLD---TTVMMRSI--PLRGFD-------QQM--------------------------------SSL------- 230 (488)
T ss_dssp HHHHHTTCC---EEEEESSC--SSTTSC-------HHH--------------------------------HHH-------
T ss_pred HHHHHcCCc---eEEEEcCc--ccccCC-------HHH--------------------------------HHH-------
Confidence 999998754 99999864 344322 000 000
Q ss_pred hccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEec---Cc--EEEcC---CCc-eecccEEE
Q 009917 300 KHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE---DG--IVVDG---QTT-PLKTDLVI 369 (522)
Q Consensus 300 ~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~---~g--v~~~d---G~~-~~~~D~VI 369 (522)
+.+.+++.+|+++.+. +.++.. +. |++.+ |+. .+++|.||
T Consensus 231 ------------------------------l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi 280 (488)
T 3dgz_A 231 ------------------------------VTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVL 280 (488)
T ss_dssp ------------------------------HHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEE
T ss_pred ------------------------------HHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEE
Confidence 1122333445555553 455532 22 45544 542 27899999
Q ss_pred EecCCCCCcccccccccccccccccCC-CCCCcccceeecCCCCCceEEEcccC--CcchhhhHHHHHHHHHHHHcCC
Q 009917 370 LATGFKGDVKLKNIFLSQTFQDYLAGS-PTEKLPLYREIIHPQIPQLAIIGFSE--SISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 370 ~aTG~~~~~~l~~~~~~~~l~~~~~~~-~~~~~~ly~~~~~~~~pnl~~iG~~~--~~~~~~~~e~qa~~ia~~l~g~ 444 (522)
+|||++|+..++..-... +.-+ +.+.+.... .+.++.||||++|.+. .+...+.+..|++.++..+.|.
T Consensus 281 ~a~G~~p~~~~l~l~~~g-----~~~~~~~G~i~vd~-~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 281 WAIGRVPETRTLNLEKAG-----ISTNPKNQKIIVDA-QEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp ECSCEEESCGGGTGGGGT-----CCBCSSSCCBCCCT-TSBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred EcccCCcccCcCCccccC-----cEecCCCCeEeECC-CCccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCC
Confidence 999999987653211000 1112 223333332 3446899999999764 2445678899999999998775
No 72
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.93 E-value=2.7e-26 Score=232.07 Aligned_cols=289 Identities=15% Similarity=0.161 Sum_probs=188.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcC--CceEEEecCCCcccccccc-ccceeecCCccceeecCCCCCCCCCCCCCChhHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARSDIGGAWIKT-VETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQV 79 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g--~~v~i~e~~~~~Gg~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (522)
+++|+|||||++|+++|..|++.| .+|+++|+++ |..|... .+. . + .......++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~~-------------~--~-----~~~~~~~~~ 61 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLST-------------G--F-----SKNKDADGL 61 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGGG-------------T--T-----TTTCCHHHH
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcccccH-------------H--H-----hCCCCHHHh
Confidence 579999999999999999999988 4689999875 3333320 000 0 0 001122344
Q ss_pred H-HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 80 L-DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 80 ~-~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
. .++..+++++++ .+.++++|..++... ++|++.+ .++.||+||+||
T Consensus 62 ~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~------------------------~~v~~~~------~~~~~d~lviAt 109 (384)
T 2v3a_A 62 AMAEPGAMAEQLNA--RILTHTRVTGIDPGH------------------------QRIWIGE------EEVRYRDLVLAW 109 (384)
T ss_dssp EEECHHHHHHHTTC--EEECSCCCCEEEGGG------------------------TEEEETT------EEEECSEEEECC
T ss_pred hccCHHHHHHhCCc--EEEeCCEEEEEECCC------------------------CEEEECC------cEEECCEEEEeC
Confidence 3 356777778887 777788898887654 4676643 369999999999
Q ss_pred cccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcc
Q 009917 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (522)
Q Consensus 159 G~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~ 238 (522)
|+ .|..|++| |.+. ..++++.++.+.... ......+|+|+|||+|.+|+|+|..++..+. +|+++.|.
T Consensus 110 G~---~p~~p~i~---g~~~--~~v~~~~~~~~~~~~-~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtlv~~~ 177 (384)
T 2v3a_A 110 GA---EPIRVPVE---GDAQ--DALYPINDLEDYARF-RQAAAGKRRVLLLGAGLIGCEFANDLSSGGY---QLDVVAPC 177 (384)
T ss_dssp CE---EECCCCCB---STTT--TCEEECSSHHHHHHH-HHHHTTCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CC---CcCCCCCC---CcCc--CCEEEECCHHHHHHH-HHhhccCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecC
Confidence 95 57788787 6542 236665554332100 0123458999999999999999999998865 49999998
Q ss_pred cceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccc
Q 009917 239 EHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQEL 318 (522)
Q Consensus 239 ~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 318 (522)
+. +++... + ..+ ..
T Consensus 178 ~~-~~~~~~----~--~~~--------------------------------~~--------------------------- 191 (384)
T 2v3a_A 178 EQ-VMPGLL----H--PAA--------------------------------AK--------------------------- 191 (384)
T ss_dssp SS-SSTTTS----C--HHH--------------------------------HH---------------------------
T ss_pred cc-hhhccc----C--HHH--------------------------------HH---------------------------
Confidence 76 444321 0 000 00
Q ss_pred cccceeccCCcccccccCCcEEEeecC-ceeEecC----cEEEcCCCceecccEEEEecCCCCCcccccccccccccccc
Q 009917 319 SSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYL 393 (522)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~ 393 (522)
.+.+.+++.+|+++.+. +.++..+ .|+++||++ +++|.||+|||++++..+++....
T Consensus 192 ----------~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~-i~~d~vv~a~G~~p~~~l~~~~g~------- 253 (384)
T 2v3a_A 192 ----------AVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEV-IPCDLVVSAVGLRPRTELAFAAGL------- 253 (384)
T ss_dssp ----------HHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCE-EEESEEEECSCEEECCHHHHHTTC-------
T ss_pred ----------HHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCE-EECCEEEECcCCCcCHHHHHHCCC-------
Confidence 01122334456666654 6666432 377789987 999999999999998754332211
Q ss_pred cCCCCCCcccceeecCCCCCceEEEcccCC---c--chhhhHHHHHHHHHHHHcCC
Q 009917 394 AGSPTEKLPLYREIIHPQIPQLAIIGFSES---I--SNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 394 ~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~---~--~~~~~~e~qa~~ia~~l~g~ 444 (522)
....+ +..... +.++.||+|++|.+.. . ..+..+..|++.+|..+.|.
T Consensus 254 -~~~~g-i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~ 306 (384)
T 2v3a_A 254 -AVNRG-IVVDRS-LRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGN 306 (384)
T ss_dssp -CBSSS-EEECTT-CBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred -CCCCC-EEECCC-CCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCC
Confidence 11122 333333 4578999999996642 1 12456789999999999875
No 73
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.93 E-value=4.7e-27 Score=244.66 Aligned_cols=306 Identities=17% Similarity=0.169 Sum_probs=185.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccce-----eecCCCCCCCCCCCCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY-----QFSDYPWPDSVTTDFPD 75 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 75 (522)
++||+|||||++|+++|..|++.|++|+|||+++.+||+|.. +.|...+......+ .+..+.++.. ......
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~-~~~~~~ 83 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVN-GDIKIN 83 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEEC-SCEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccC-CCCccC
Confidence 479999999999999999999999999999999999999876 33432221110000 0000000000 000011
Q ss_pred hhHHHHH-----------HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCC
Q 009917 76 HNQVLDY-----------IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNH 144 (522)
Q Consensus 76 ~~~~~~y-----------l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g 144 (522)
..++..+ +...+++.++ .+.+++.+.. +. +.+.|++.++
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~~---~~----------------------~~v~V~~~~G--- 133 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKV--TYYKGNGSFE---DE----------------------TKIRVTPVDG--- 133 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESEEEES---SS----------------------SEEEEECCTT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEEEc---cC----------------------CeEEEEecCC---
Confidence 2233222 3445556666 6777665531 21 3466655443
Q ss_pred ceeE------EEeCEEEEeecccCCCCCCCCCCCCCCCCccCc-eEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHH
Q 009917 145 STEV------HQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHG-KVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (522)
Q Consensus 145 ~~~~------~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g-~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~d 217 (522)
..++ +.||+||+|||+.+ +. +| |.+ +.+ .++|+.++.... ..+|+|+|||+|.+|+|
T Consensus 134 ~~~~~~~~~~i~~d~lViAtGs~p--~~---~~---g~~-~~~~~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e 197 (478)
T 1v59_A 134 LEGTVKEDHILDVKNIIVATGSEV--TP---FP---GIE-IDEEKIVSSTGALSLK-------EIPKRLTIIGGGIIGLE 197 (478)
T ss_dssp CTTCCSSCEEEEEEEEEECCCEEE--CC---CT---TCC-CCSSSEECHHHHTTCS-------SCCSEEEEECCSHHHHH
T ss_pred CcccccccceEEeCEEEECcCCCC--CC---CC---CCC-CCCceEEcHHHHHhhh-------ccCceEEEECCCHHHHH
Confidence 1124 89999999999652 22 34 443 233 466766655432 24799999999999999
Q ss_pred HHHHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHH
Q 009917 218 IAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADI 297 (522)
Q Consensus 218 ia~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (522)
+|..|++.+. +||++.|++. ++|... ..+ ...
T Consensus 198 ~A~~l~~~g~---~Vtlv~~~~~-~l~~~~-------~~~--------------------------------~~~----- 229 (478)
T 1v59_A 198 MGSVYSRLGS---KVTVVEFQPQ-IGASMD-------GEV--------------------------------AKA----- 229 (478)
T ss_dssp HHHHHHHTTC---EEEEECSSSS-SSSSSC-------HHH--------------------------------HHH-----
T ss_pred HHHHHHHcCC---EEEEEEeCCc-cccccC-------HHH--------------------------------HHH-----
Confidence 9999998765 4999999886 445322 000 000
Q ss_pred hhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEec--C----cEEEc-----CCCceecc
Q 009917 298 KKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--D----GIVVD-----GQTTPLKT 365 (522)
Q Consensus 298 ~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~----gv~~~-----dG~~~~~~ 365 (522)
+.+.+++.+|+++.+. +.++.. + .|+++ +|++ +++
T Consensus 230 --------------------------------l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~-~~~ 276 (478)
T 1v59_A 230 --------------------------------TQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQEN-LEA 276 (478)
T ss_dssp --------------------------------HHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEE-EEE
T ss_pred --------------------------------HHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceE-EEC
Confidence 1112233345565553 556653 2 24555 3456 999
Q ss_pred cEEEEecCCCCCcc--cccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHc
Q 009917 366 DLVILATGFKGDVK--LKNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 366 D~VI~aTG~~~~~~--l~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~ 442 (522)
|.||+|||++|+.. +++... + .-++.+.+..... +.++.||+|++|.+.. +...+.+..|++.+|..+.
T Consensus 277 D~vv~a~G~~p~~~~l~l~~~g---~----~~~~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 348 (478)
T 1v59_A 277 EVLLVAVGRRPYIAGLGAEKIG---L----EVDKRGRLVIDDQ-FNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLK 348 (478)
T ss_dssp SEEEECSCEEECCTTSCTTTTT---C----CBCTTSCBCCCTT-SBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCcCCCCCCchhcC---c----eeCCCCCEeECcC-CccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHc
Confidence 99999999999865 322111 0 0011232333333 3478999999997654 3346789999999999887
Q ss_pred CC
Q 009917 443 GA 444 (522)
Q Consensus 443 g~ 444 (522)
|.
T Consensus 349 ~~ 350 (478)
T 1v59_A 349 TG 350 (478)
T ss_dssp HS
T ss_pred CC
Confidence 64
No 74
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.93 E-value=2.5e-26 Score=240.88 Aligned_cols=310 Identities=18% Similarity=0.203 Sum_probs=185.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC--------Cccccccc--cccceeecCCccce----eecCCCCCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS--------DIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDS 68 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~--------~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~ 68 (522)
++||+|||||++|+++|..|++.|.+|+|||+++ .+||+|.+ ++|...+..+...+ .+..+.+...
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~ 111 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVE 111 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4799999999999999999999999999999964 79999987 56655433222211 1112222211
Q ss_pred CCCCCCChhHHHHHHHHHHHhcCC-------ccceE-eeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEec
Q 009917 69 VTTDFPDHNQVLDYIQSYASHFDL-------RKHIK-FNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVED 140 (522)
Q Consensus 69 ~~~~~~~~~~~~~yl~~~~~~~~l-------~~~i~-~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 140 (522)
.........+.+|.+.+.+++.. ...+. +..++..++. +.+.+.+
T Consensus 112 -~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~--------------------------~~v~v~~ 164 (519)
T 3qfa_A 112 -ETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGP--------------------------HRIKATN 164 (519)
T ss_dssp -SSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEET--------------------------TEEEEEC
T ss_pred -CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC--------------------------CEEEEEc
Confidence 12233456666666554443210 00121 1223333322 1233333
Q ss_pred CCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHH
Q 009917 141 AKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAM 220 (522)
Q Consensus 141 ~~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~ 220 (522)
. +|+.+++.||+||+|||+ .|..|++| |.+.+ ++++.++..+ ...+++|+|||+|.+|+|+|.
T Consensus 165 ~-~g~~~~i~~d~lViATGs---~p~~p~i~---G~~~~---~~t~~~~~~l-------~~~~~~vvVIGgG~ig~E~A~ 227 (519)
T 3qfa_A 165 N-KGKEKIYSAERFLIATGE---RPRYLGIP---GDKEY---CISSDDLFSL-------PYCPGKTLVVGASYVALECAG 227 (519)
T ss_dssp T-TCCCCEEEEEEEEECCCE---EECCCCCT---THHHH---CBCHHHHTTC-------SSCCCSEEEECCSHHHHHHHH
T ss_pred C-CCCEEEEECCEEEEECCC---CcCCCCCC---CccCc---eEcHHHHhhh-------hhcCCeEEEECCcHHHHHHHH
Confidence 2 244468999999999994 67888888 75542 4455444432 245678999999999999999
Q ss_pred HHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 009917 221 ECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKK 300 (522)
Q Consensus 221 ~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (522)
.++..+.+ ||++.|+ . ++|..+ ..+ .+.+
T Consensus 228 ~l~~~G~~---Vtlv~~~-~-~l~~~d-------~~~--------------------------------~~~~------- 256 (519)
T 3qfa_A 228 FLAGIGLD---VTVMVRS-I-LLRGFD-------QDM--------------------------------ANKI------- 256 (519)
T ss_dssp HHHHTTCC---EEEEESS-C-SSTTSC-------HHH--------------------------------HHHH-------
T ss_pred HHHHcCCe---EEEEecc-c-ccccCC-------HHH--------------------------------HHHH-------
Confidence 99998754 9999985 2 444432 000 0000
Q ss_pred ccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeE---ec---CcE--E--EcCCCc--eecccE
Q 009917 301 HRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSF---CE---DGI--V--VDGQTT--PLKTDL 367 (522)
Q Consensus 301 ~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~---~~---~gv--~--~~dG~~--~~~~D~ 367 (522)
.+.+++.+|+++.+. +.++ .. +++ . ..+|.+ .+++|.
T Consensus 257 ------------------------------~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~ 306 (519)
T 3qfa_A 257 ------------------------------GEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNT 306 (519)
T ss_dssp ------------------------------HHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESE
T ss_pred ------------------------------HHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCE
Confidence 112233344554442 2222 22 222 2 235532 268999
Q ss_pred EEEecCCCCCcccccccccccccccccC-C-CCCCcccceeecCCCCCceEEEcccC--CcchhhhHHHHHHHHHHHHcC
Q 009917 368 VILATGFKGDVKLKNIFLSQTFQDYLAG-S-PTEKLPLYREIIHPQIPQLAIIGFSE--SISNLYTSEMRCRWLAELLDG 443 (522)
Q Consensus 368 VI~aTG~~~~~~l~~~~~~~~l~~~~~~-~-~~~~~~ly~~~~~~~~pnl~~iG~~~--~~~~~~~~e~qa~~ia~~l~g 443 (522)
||+|||++|+..++.. ++.... + ..+.+..... +.++.||||++|.+. .+...+.+..|++.+|..+.|
T Consensus 307 vi~a~G~~p~~~~l~l------~~~gl~~~~~~G~I~Vd~~-~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 307 VMLAIGRDACTRKIGL------ETVGVKINEKTGKIPVTDE-EQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp EEECSCEEESCSSSCS------TTTTCCCCTTTCCBCCCTT-SBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHS
T ss_pred EEEecCCcccCCCCCh------hhcCcEEcCCCCeEeeCCC-CccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 9999999998764221 111111 1 1233333332 446899999999765 344567889999999998876
Q ss_pred C
Q 009917 444 A 444 (522)
Q Consensus 444 ~ 444 (522)
.
T Consensus 380 ~ 380 (519)
T 3qfa_A 380 G 380 (519)
T ss_dssp C
T ss_pred C
Confidence 4
No 75
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.93 E-value=2.2e-26 Score=239.33 Aligned_cols=298 Identities=14% Similarity=0.184 Sum_probs=183.7
Q ss_pred CcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH-
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL- 80 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 80 (522)
+||+|||||++|+++|..|++. |.+|+|||+++..++.... .+ . +.. ..+....++.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-~~-------~----~~~--------~~~~~~~~l~~ 96 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG-LP-------Y----VIS--------GAIASTEKLIA 96 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG-HH-------H----HHT--------TSSSCGGGGBS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC-cc-------h----hhc--------CCcCCHHHhhh
Confidence 5899999999999999999996 8999999998766422110 00 0 000 0001111221
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
.+...+.+++++ .+.++++|+.++... + .|++.+..+|+..++.||+||+|||+
T Consensus 97 ~~~~~~~~~~gv--~~~~~~~v~~i~~~~----------------------~--~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 97 RNVKTFRDKYGI--DAKVRHEVTKVDTEK----------------------K--IVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp SCHHHHHHTTCC--EEESSEEEEEEETTT----------------------T--EEEEEETTTCCEEEEECSEEEECCCE
T ss_pred cCHHHHHhhcCC--EEEeCCEEEEEECCC----------------------C--EEEEEEcCCCceEEEEcCEEEECCCC
Confidence 223445566677 788889999998654 2 34454422243347999999999994
Q ss_pred cCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHh-hhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEA-AANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 161 ~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~-~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
.|+.|++| |.+. . .++|...+.+..... ......+|+|+|||+|.+|+|+|..+++.+. +|+++.|.+
T Consensus 151 ---~p~~p~i~---G~~~-~-~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~ 219 (480)
T 3cgb_A 151 ---RPVMPEWE---GRDL-Q-GVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGK---KVRMIERND 219 (480)
T ss_dssp ---EECCCCCB---TTTS-B-TEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTC---EEEEECCGG
T ss_pred ---cccCCCCC---CccC-C-CEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCC---eEEEEEeCC
Confidence 57888888 7653 2 255544433211000 0001278999999999999999999998765 499999987
Q ss_pred ceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccccc
Q 009917 240 HWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELS 319 (522)
Q Consensus 240 ~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 319 (522)
. +++... ..+ .+.
T Consensus 220 ~-~l~~~~-------~~~--------------------------------~~~--------------------------- 232 (480)
T 3cgb_A 220 H-IGTIYD-------GDM--------------------------------AEY--------------------------- 232 (480)
T ss_dssp G-TTSSSC-------HHH--------------------------------HHH---------------------------
T ss_pred c-hhhcCC-------HHH--------------------------------HHH---------------------------
Confidence 6 333221 000 000
Q ss_pred ccceeccCCcccccccCCcEEEeecC-ceeEecCc-E--EEcCCCceecccEEEEecCCCCCcccccccccccccccccC
Q 009917 320 SCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG-I--VVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAG 395 (522)
Q Consensus 320 ~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~g-v--~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~ 395 (522)
+.+.+++.+|+++.+. +.++..++ + +..++.+ +++|.||+|||++++.++++....+ .
T Consensus 233 ----------l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~-i~~D~vi~a~G~~p~~~~l~~~g~~------~- 294 (480)
T 3cgb_A 233 ----------IYKEADKHHIEILTNENVKAFKGNERVEAVETDKGT-YKADLVLVSVGVKPNTDFLEGTNIR------T- 294 (480)
T ss_dssp ----------HHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEE-EECSEEEECSCEEESCGGGTTSCCC------B-
T ss_pred ----------HHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCE-EEcCEEEECcCCCcChHHHHhCCcc------c-
Confidence 1112223345555443 55555433 2 2334556 9999999999999987654322111 0
Q ss_pred CCCCCcccceeecCCCCCceEEEcccCCc-----------chhhhHHHHHHHHHHHHcCC
Q 009917 396 SPTEKLPLYREIIHPQIPQLAIIGFSESI-----------SNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 396 ~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~ia~~l~g~ 444 (522)
++.+.+..... +.++.||+|++|.+... .....+..|++.+|..+.|.
T Consensus 295 ~~~G~I~Vd~~-~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 353 (480)
T 3cgb_A 295 NHKGAIEVNAY-MQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDK 353 (480)
T ss_dssp CTTSCBCCCTT-SBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEECCC-ccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCC
Confidence 12233333332 34578999999965421 23568999999999999875
No 76
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.93 E-value=3.1e-26 Score=237.31 Aligned_cols=299 Identities=14% Similarity=0.124 Sum_probs=185.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccc----eeecCCCCCCCCCCCCCCh
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQL----YQFSDYPWPDSVTTDFPDH 76 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 76 (522)
++||+|||||++|+++|..|++.|++|+|||+ +.+||+|.. +.|...+..+... ..+..+.+... .. ....
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~-~~-~~~~ 81 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVG-ES-RFDW 81 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEEC-CC-EECH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccC-CC-CcCH
Confidence 36999999999999999999999999999999 789999876 4444322111110 01111111100 00 1122
Q ss_pred hHHH-----------HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEe-cCCCC
Q 009917 77 NQVL-----------DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVE-DAKNH 144 (522)
Q Consensus 77 ~~~~-----------~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~g 144 (522)
.++. .++..+.++.++ .+..+ ++..++ .+.|.+. ++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~--------------------------~~~v~~~~~~--- 129 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGA--EILDT-RAELAG--------------------------PNTVKLLASG--- 129 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEES-CEEESS--------------------------SSEEEETTTT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEE-EEEEee--------------------------CCEEEEecCC---
Confidence 2222 233344444454 33333 333221 1356663 32
Q ss_pred ceeEEEeCEEEEeecccCCCCC-CCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHh
Q 009917 145 STEVHQVDFVILCVGRFSDVPN-IPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECT 223 (522)
Q Consensus 145 ~~~~~~~d~lvvAtG~~s~~p~-~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~ 223 (522)
.++.||+||+|||. .|. .|.+| |.+. ++++.++... ...+++|+|||+|.+|+|+|..++
T Consensus 130 --~~~~~d~lviAtG~---~p~~~p~i~---G~~~----~~~~~~~~~~-------~~~~~~v~ViGgG~~g~e~A~~l~ 190 (463)
T 4dna_A 130 --KTVTAERIVIAVGG---HPSPHDALP---GHEL----CITSNEAFDL-------PALPESILIAGGGYIAVEFANIFH 190 (463)
T ss_dssp --EEEEEEEEEECCCE---EECCCTTST---TGGG----CBCHHHHTTC-------SSCCSEEEEECCSHHHHHHHHHHH
T ss_pred --eEEEeCEEEEecCC---CcccCCCCC---Cccc----cccHHHHhhh-------hcCCCeEEEECCCHHHHHHHHHHH
Confidence 67999999999994 577 88888 7652 3444444332 245899999999999999999999
Q ss_pred hhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccc
Q 009917 224 TANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (522)
Q Consensus 224 ~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (522)
..+. +|+++.|.+. ++|... ..+ .
T Consensus 191 ~~g~---~Vt~v~~~~~-~l~~~~-------~~~--------------------------------~------------- 214 (463)
T 4dna_A 191 GLGV---KTTLIYRGKE-ILSRFD-------QDM--------------------------------R------------- 214 (463)
T ss_dssp HTTC---EEEEECSSSS-SSTTSC-------HHH--------------------------------H-------------
T ss_pred HcCC---eEEEEEcCCc-cccccC-------HHH--------------------------------H-------------
Confidence 8765 4999999886 334322 000 0
Q ss_pred cccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC-----cEE-EcCCCceecccEEEEecCCCC
Q 009917 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIV-VDGQTTPLKTDLVILATGFKG 376 (522)
Q Consensus 304 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----gv~-~~dG~~~~~~D~VI~aTG~~~ 376 (522)
+.+.+.+++.+|+++.+. +.++..+ .|. +++|+ +++|.||+|||+++
T Consensus 215 ------------------------~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~--i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 215 ------------------------RGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE--IVADQVMLALGRMP 268 (463)
T ss_dssp ------------------------HHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE--EEESEEEECSCEEE
T ss_pred ------------------------HHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe--EEeCEEEEeeCccc
Confidence 011123344456676654 6666543 356 66775 89999999999999
Q ss_pred CcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC-cchhhhHHHHHHHHHHHHcCC
Q 009917 377 DVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES-ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 377 ~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~ia~~l~g~ 444 (522)
+..++.. ++.... ++.+.+..... +.++.||||++|.+.. +...+.+..|++.++..+.|.
T Consensus 269 ~~~~l~l------~~~g~~~~~~G~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 269 NTNGLGL------EAAGVRTNELGAIIVDAF-SRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp SCTTSST------GGGTCCBCTTSCBCCCTT-CBCSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CCCCCCc------cccCceECCCCCEeECcC-CCCCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcCC
Confidence 8764221 110110 22233333333 3478999999997654 344678999999999998775
No 77
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.92 E-value=1.2e-25 Score=240.20 Aligned_cols=311 Identities=17% Similarity=0.194 Sum_probs=181.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecC-C-------Cccccccc--cccceeecCCccce----eecCCCCCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR-S-------DIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDS 68 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~-~-------~~Gg~w~~--~~~~~~~~~~~~~~----~~~~~~~~~~ 68 (522)
.+||+|||||+||+++|..|++.|++|+|||+. + .+||+|.+ ++|...+....... .+..+.+...
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~~ 186 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLD 186 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcccc
Confidence 479999999999999999999999999999973 2 48898876 55554332211100 0111111100
Q ss_pred CCCCCCChhHHHHHHHHHHHhcCCc-------cceEe-eeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEec
Q 009917 69 VTTDFPDHNQVLDYIQSYASHFDLR-------KHIKF-NRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVED 140 (522)
Q Consensus 69 ~~~~~~~~~~~~~yl~~~~~~~~l~-------~~i~~-~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 140 (522)
.........++.+|++.+++++... ..+.+ ...+..++ .|.+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~--------------------------~~~v~v~~ 240 (598)
T 2x8g_A 187 RSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLIS--------------------------PHEVQITD 240 (598)
T ss_dssp GGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEE--------------------------TTEEEEEC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcC--------------------------CCEEEEEe
Confidence 0001234567777777766543210 01111 11222221 14565544
Q ss_pred CCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHH
Q 009917 141 AKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAM 220 (522)
Q Consensus 141 ~~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~ 220 (522)
. +|+..++.||+||+|||+ .|+.|++| |.+.+ .+++.++... ...+++|+|||+|.+|+|+|.
T Consensus 241 ~-~g~~~~~~~d~lviAtGs---~p~~p~i~---G~~~~---~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~ 303 (598)
T 2x8g_A 241 K-NQKVSTITGNKIILATGE---RPKYPEIP---GAVEY---GITSDDLFSL-------PYFPGKTLVIGASYVALECAG 303 (598)
T ss_dssp T-TCCEEEEEEEEEEECCCE---EECCCSST---THHHH---CEEHHHHTTC-------SSCCCSEEEECCSHHHHHHHH
T ss_pred C-CCCeEEEEeCEEEEeCCC---CCCCCCCC---Ccccc---eEcHHHHhhC-------ccCCCEEEEECCCHHHHHHHH
Confidence 2 244457999999999994 57888888 76543 3455444332 245789999999999999999
Q ss_pred HHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 009917 221 ECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKK 300 (522)
Q Consensus 221 ~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (522)
.|++.+.+ ||++.|+ . ++|... ..+ ...+.+
T Consensus 304 ~l~~~g~~---Vtlv~~~-~-~l~~~d-------~~~--------------------------------~~~~~~----- 334 (598)
T 2x8g_A 304 FLASLGGD---VTVMVRS-I-LLRGFD-------QQM--------------------------------AEKVGD----- 334 (598)
T ss_dssp HHHHTTCC---EEEEESS-C-SSTTSC-------HHH--------------------------------HHHHHH-----
T ss_pred HHHHcCCE---EEEEECC-c-CcCcCC-------HHH--------------------------------HHHHHH-----
Confidence 99998754 9999987 2 444322 000 000111
Q ss_pred ccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeE--------ec---CcE----EEcCCCceec
Q 009917 301 HRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSF--------CE---DGI----VVDGQTTPLK 364 (522)
Q Consensus 301 ~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~--------~~---~gv----~~~dG~~~~~ 364 (522)
.+++.+|+++.+. +.++ .+ +++ .+.+|++ ++
T Consensus 335 --------------------------------~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~-~~ 381 (598)
T 2x8g_A 335 --------------------------------YMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKK-FE 381 (598)
T ss_dssp --------------------------------HHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCE-EE
T ss_pred --------------------------------HHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcE-Ee
Confidence 1112223333321 2222 11 222 2357765 54
Q ss_pred --ccEEEEecCCCCCcccccccccccccccccCCCCCCcccceeecCCCCCceEEEccc-CC-cchhhhHHHHHHHHHHH
Q 009917 365 --TDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFS-ES-ISNLYTSEMRCRWLAEL 440 (522)
Q Consensus 365 --~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~-~~-~~~~~~~e~qa~~ia~~ 440 (522)
+|.||+|||++|+..++..- ...+. . ++.+.+..... +.++.||+|++|.+ .. +...+.+..|++.+|..
T Consensus 382 ~~~D~vi~a~G~~p~~~~l~~~-~~gl~---~-~~~G~i~vd~~-~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~ 455 (598)
T 2x8g_A 382 EEFETVIFAVGREPQLSKVLCE-TVGVK---L-DKNGRVVCTDD-EQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARR 455 (598)
T ss_dssp EEESEEEECSCEEECGGGTBCG-GGCCC---B-CTTSCBCCCTT-SBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHH
T ss_pred ccCCEEEEEeCCccccCccCch-hcCce---E-CCCCcEEeCCC-CcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHH
Confidence 99999999999987643210 00000 0 12232333333 45789999999977 33 34567889999999998
Q ss_pred HcCC
Q 009917 441 LDGA 444 (522)
Q Consensus 441 l~g~ 444 (522)
+.+.
T Consensus 456 i~~~ 459 (598)
T 2x8g_A 456 LFAG 459 (598)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 8653
No 78
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.92 E-value=1.1e-25 Score=231.23 Aligned_cols=171 Identities=20% Similarity=0.324 Sum_probs=119.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||||+|||++|..|++.|++|+|||+.+.+||.|.+..|. |....++.++
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~------------------------~~~~~~~~~~ 177 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPG------------------------FKLEKSVVER 177 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCT------------------------TTSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCC------------------------ccCCHHHHHH
Confidence 3689999999999999999999999999999999999988752221 1112467777
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
..++++++++ .+++++.|. . .|++.+. .+.||+||+|||..
T Consensus 178 ~~~~l~~~gv--~~~~~~~v~-----~-------------------------~v~~~~~------~~~~d~vvlAtG~~- 218 (456)
T 2vdc_G 178 RVKLLADAGV--IYHPNFEVG-----R-------------------------DASLPEL------RRKHVAVLVATGVY- 218 (456)
T ss_dssp HHHHHHHTTC--EEETTCCBT-----T-------------------------TBCHHHH------HSSCSEEEECCCCC-
T ss_pred HHHHHHHCCc--EEEeCCEec-----c-------------------------EEEhhHh------HhhCCEEEEecCCC-
Confidence 7888888888 677776541 0 1222221 24699999999964
Q ss_pred CCCCCCCCCCCCCCCccCceEEeeccCCCCchHh---h--------hhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCc
Q 009917 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEA---A--------ANLVKGKRVTVVGLQKSALDIAMECTTANGLENP 231 (522)
Q Consensus 163 ~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~---~--------~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~ 231 (522)
.|+.|.+| |.+ ..| +++..+|....... . .....+|+|+|||+|.+|+|+|..+.+.+. ++
T Consensus 219 -~~~~~~ip---G~~-~~g-v~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga--~~ 290 (456)
T 2vdc_G 219 -KARDIKAP---GSG-LGN-IVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGA--TS 290 (456)
T ss_dssp -EECCTTCS---CCT-TTT-EEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTC--SE
T ss_pred -CCCCCCCC---CCc-CCC-cEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCC--CE
Confidence 36777777 654 233 44443331100000 0 012679999999999999999999988764 35
Q ss_pred eEEEEcccceeec
Q 009917 232 CTVLYRTEHWNIP 244 (522)
Q Consensus 232 Vt~v~r~~~~~~p 244 (522)
||++.|++...+|
T Consensus 291 Vtiv~r~~~~~~p 303 (456)
T 2vdc_G 291 VKCLYRRDRKNMP 303 (456)
T ss_dssp EEEECSSCSTTCS
T ss_pred EEEEEeCCccCCC
Confidence 9999998764334
No 79
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.92 E-value=1.1e-25 Score=234.14 Aligned_cols=308 Identities=16% Similarity=0.191 Sum_probs=183.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
+++|||||||+||+++|+.|.+.+++|+|||+++.. .|. |+-+.....-.+..++..-
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~--~~~--------------------PlL~~va~G~l~~~~i~~p 99 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF--LFT--------------------PLLPSAPVGTVDEKSIIEP 99 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE--ECG--------------------GGGGGTTTTSSCGGGGEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc--ccc--------------------cchhHHhhccccHHHhhhh
Confidence 578999999999999999999999999999998642 010 1000000000111222212
Q ss_pred HHHHHHhcCCccceEe-eeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecC---------------CCCce
Q 009917 83 IQSYASHFDLRKHIKF-NRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA---------------KNHST 146 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~-~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---------------~~g~~ 146 (522)
++.+..... ..+.| ..+|++|+.+. .+|++++. ..+..
T Consensus 100 ~~~~~~~~~--~~v~~~~~~v~~ID~~~------------------------k~V~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (502)
T 4g6h_A 100 IVNFALKKK--GNVTYYEAEATSINPDR------------------------NTVTIKSLSAVSQLYQPENHLGLHQAEP 153 (502)
T ss_dssp HHHHHTTCS--SCEEEEEEEEEEEEGGG------------------------TEEEEEEEEEEEECSSSCCCCCCCTTCC
T ss_pred HHHHHHhhc--CCeEEEEEEEEEEEhhh------------------------CEEEEeecccceeecccccccccccCCc
Confidence 222222211 13433 56889998765 23444321 01234
Q ss_pred eEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCch---H------hh-------hhccCCCEEEEEc
Q 009917 147 EVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDY---E------AA-------ANLVKGKRVTVVG 210 (522)
Q Consensus 147 ~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~---~------~~-------~~~~~gk~VvVIG 210 (522)
.++.||+|||||| +.|+.|.+| |.+++. +......+... . .. .......+|+|||
T Consensus 154 ~~i~YD~LViAtG---s~~~~~~ip---G~~e~a---~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvG 224 (502)
T 4g6h_A 154 AEIKYDYLISAVG---AEPNTFGIP---GVTDYG---HFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVG 224 (502)
T ss_dssp EEEECSEEEECCC---CEECCTTCT---THHHHC---EECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEEC
T ss_pred eEEeCCEEEEcCC---cccccCCcc---Cccccc---CCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEEC
Confidence 6899999999999 467888888 765421 11111100000 0 00 0111235899999
Q ss_pred CCCCHHHHHHHHhhhcCC-----------CCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHH
Q 009917 211 LQKSALDIAMECTTANGL-----------ENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLA 279 (522)
Q Consensus 211 ~G~sg~dia~~l~~~~~~-----------~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~ 279 (522)
+|.+|+|+|.+|++.... ..+|+++.+.+. ++|... .
T Consensus 225 gG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~-il~~~~-------~------------------------ 272 (502)
T 4g6h_A 225 GGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI-VLNMFE-------K------------------------ 272 (502)
T ss_dssp CSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS-SSTTSC-------H------------------------
T ss_pred CCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccc-cccCCC-------H------------------------
Confidence 999999999999864210 135999999887 666543 0
Q ss_pred hhhhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCcEEE--
Q 009917 280 TMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVV-- 356 (522)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~-- 356 (522)
..++. ..+.+++.+|+++.+. +.+++++++.+
T Consensus 273 --------~~~~~-------------------------------------~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~ 307 (502)
T 4g6h_A 273 --------KLSSY-------------------------------------AQSHLENTSIKVHLRTAVAKVEEKQLLAKT 307 (502)
T ss_dssp --------HHHHH-------------------------------------HHHHHHHTTCEEETTEEEEEECSSEEEEEE
T ss_pred --------HHHHH-------------------------------------HHHHHHhcceeeecCceEEEEeCCceEEEE
Confidence 00111 1123445567777775 78888887655
Q ss_pred --cCCC---ceecccEEEEecCCCCCcccccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCC---cchhh
Q 009917 357 --DGQT---TPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSES---ISNLY 428 (522)
Q Consensus 357 --~dG~---~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~---~~~~~ 428 (522)
.||+ +.+++|.||||+|.+++....+.. .. +. ...+..+.+.+...+..+++||+|++|.+.. +...+
T Consensus 308 ~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~-~~-~~--~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~ 383 (502)
T 4g6h_A 308 KHEDGKITEETIPYGTLIWATGNKARPVITDLF-KK-IP--EQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQ 383 (502)
T ss_dssp ECTTSCEEEEEEECSEEEECCCEECCHHHHHHH-HH-SG--GGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCHH
T ss_pred EecCcccceeeeccCEEEEccCCcCCHHHHhHH-Hh-cc--ccccCCCceeECCccccCCCCCEEEEEcccCCCCCCchH
Confidence 3553 238999999999999874221111 00 00 1112334455555666778999999996542 23467
Q ss_pred hHHHHHHHHHHHHcCCCCCC
Q 009917 429 TSEMRCRWLAELLDGAVKLP 448 (522)
Q Consensus 429 ~~e~qa~~ia~~l~g~~~lp 448 (522)
.|..||+++|+.|.+..+.+
T Consensus 384 ~A~qqg~~~A~ni~~~~~~~ 403 (502)
T 4g6h_A 384 VAHQEAEYLAKNFDKMAQIP 403 (502)
T ss_dssp HHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhccc
Confidence 89999999999997655543
No 80
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.91 E-value=2.1e-25 Score=241.69 Aligned_cols=268 Identities=18% Similarity=0.168 Sum_probs=190.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
+++|+|||||++||++|..|++.|++|+|||+++.+||.|.. .+|+ +....++.
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~------------------------~~~~~~~~ 446 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPG------------------------LSAWGRVK 446 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTT------------------------CGGGGHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCc------------------------hhHHHHHH
Confidence 478999999999999999999999999999999999998875 2221 22346788
Q ss_pred HHHHHHHHhc-CCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeec
Q 009917 81 DYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVG 159 (522)
Q Consensus 81 ~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG 159 (522)
+|+...++++ ++ .++++++|. ..+. .++.||+||+|||
T Consensus 447 ~~~~~~~~~~~gv--~~~~~~~v~----------------------------------~~~~-----~~~~~d~lvlAtG 485 (690)
T 3k30_A 447 EYREAVLAELPNV--EIYRESPMT----------------------------------GDDI-----VEFGFEHVITATG 485 (690)
T ss_dssp HHHHHHHHTCTTE--EEESSCCCC----------------------------------HHHH-----HHTTCCEEEECCC
T ss_pred HHHHHHHHHcCCC--EEEECCeec----------------------------------HHHH-----hhcCCCEEEEcCC
Confidence 8888888887 66 555553321 1111 3468999999999
Q ss_pred ccCCC------CCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEc--CCCCHHHHHHHHhhhcCCCCc
Q 009917 160 RFSDV------PNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVG--LQKSALDIAMECTTANGLENP 231 (522)
Q Consensus 160 ~~s~~------p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG--~G~sg~dia~~l~~~~~~~~~ 231 (522)
..+ . |..|.+| |.+. ..++++.++.. .....+++|+||| +|.+|+|+|..|+..+. +
T Consensus 486 ~~~-~~~~~~~~~~~~i~---G~~~--~~v~~~~~~l~------~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~---~ 550 (690)
T 3k30_A 486 ATW-RTDGVARFHTTALP---IAEG--MQVLGPDDLFA------GRLPDGKKVVVYDDDHYYLGGVVAELLAQKGY---E 550 (690)
T ss_dssp EEE-CSSCCSSSCSSCCC---BCTT--SEEECHHHHHT------TCCCSSSEEEEEECSCSSHHHHHHHHHHHTTC---E
T ss_pred Ccc-ccccccccCCCCCC---CCCC--CcEEcHHHHhC------CCCCCCCEEEEEcCCCCccHHHHHHHHHhCCC---e
Confidence 762 2 5567777 6553 35667666543 2346789999999 99999999999998765 4
Q ss_pred eEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCC
Q 009917 232 CTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPK 311 (522)
Q Consensus 232 Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~ 311 (522)
|+++.+.+. +.+... .+
T Consensus 551 Vtlv~~~~~-l~~~~~---~~----------------------------------------------------------- 567 (690)
T 3k30_A 551 VSIVTPGAQ-VSSWTN---NT----------------------------------------------------------- 567 (690)
T ss_dssp EEEEESSSS-TTGGGG---GG-----------------------------------------------------------
T ss_pred eEEEecccc-cccccc---cc-----------------------------------------------------------
Confidence 999998775 222110 00
Q ss_pred CcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCcEEEc-----CCCceecccEEEEecCCCCCcccccccc
Q 009917 312 HSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVD-----GQTTPLKTDLVILATGFKGDVKLKNIFL 385 (522)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~~-----dG~~~~~~D~VI~aTG~~~~~~l~~~~~ 385 (522)
.....+.+.+++.+|+++.+. +.+++++++.+. ++++ +++|.||+|||++++..+...+.
T Consensus 568 -------------~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~-i~aD~VV~A~G~~p~~~l~~~l~ 633 (690)
T 3k30_A 568 -------------FEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERE-LECDAVVMVTARLPREELYLDLV 633 (690)
T ss_dssp -------------TCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEE-EECSEEEEESCEEECCHHHHHHH
T ss_pred -------------hhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEE-EECCEEEECCCCCCChHHHHHHh
Confidence 000112233445567787775 788888776554 3445 89999999999999876543211
Q ss_pred cccccccccCCCCCCcccceeecCCCCCceEEEcccCCcchhhhHHHHHHHHHHHHcCCCC
Q 009917 386 SQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSESISNLYTSEMRCRWLAELLDGAVK 446 (522)
Q Consensus 386 ~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~~~~~~e~qa~~ia~~l~g~~~ 446 (522)
. . .. .++.||+|++|.+..+..+..+..|++.+|..+.+.+.
T Consensus 634 ~-----------~----~~----~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 634 A-----------R----RD----AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp H-----------H----HH----HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCCC
T ss_pred h-----------h----hc----ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhcc
Confidence 0 0 00 56789999999877766677799999999999987643
No 81
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.91 E-value=5.1e-25 Score=229.87 Aligned_cols=308 Identities=17% Similarity=0.154 Sum_probs=185.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecC--------CCccccccc--cccceeecCCccceeec-----CCCCCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR--------SDIGGAWIK--TVETTMLQTPKQLYQFS-----DYPWPDS 68 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~--------~~~Gg~w~~--~~~~~~~~~~~~~~~~~-----~~~~~~~ 68 (522)
+||+|||||++|+.+|..+++.|.+|+|||+. ..+||+|.+ |.|...+...+..+... .+.+..
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~- 121 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF- 121 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE-
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc-
Confidence 69999999999999999999999999999974 358999988 77766553332221100 000000
Q ss_pred CCCCCCChhHHHHHHHHHHHh-----------cCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEE
Q 009917 69 VTTDFPDHNQVLDYIQSYASH-----------FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (522)
Q Consensus 69 ~~~~~~~~~~~~~yl~~~~~~-----------~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (522)
...-.....+.++.+.+.++ .++ .+ +.....-+.. +.-.|.
T Consensus 122 -~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V--~~-i~G~a~f~~~------------------------~~v~V~ 173 (542)
T 4b1b_A 122 -DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKV--KY-INGLAKLKDK------------------------NTVSYY 173 (542)
T ss_dssp -EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ECEEEEEEET------------------------TEEEEE
T ss_pred -CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EE-EeeeEEEcCC------------------------CcceEe
Confidence 00001223444444443332 222 11 1111111111 112333
Q ss_pred EecCCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHH
Q 009917 138 VEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (522)
Q Consensus 138 ~~~~~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~d 217 (522)
..+ ..+..+++++|++||||| +.|.+|+.+ +... ..+++|.+...+ ...+++++|||+|.+|+|
T Consensus 174 ~~~-~~~~~~~i~a~~iiIATG---s~P~~P~~~---~~~~--~~~~ts~~~l~l-------~~lP~~lvIIGgG~IGlE 237 (542)
T 4b1b_A 174 LKG-DLSKEETVTGKYILIATG---CRPHIPDDV---EGAK--ELSITSDDIFSL-------KKDPGKTLVVGASYVALE 237 (542)
T ss_dssp EC---CCCEEEEEEEEEEECCC---EEECCCSSS---BTHH--HHCBCHHHHTTC-------SSCCCSEEEECCSHHHHH
T ss_pred ecc-cCCceEEEeeeeEEeccC---CCCCCCCcc---cCCC--ccccCchhhhcc-------ccCCceEEEECCCHHHHH
Confidence 322 123457899999999999 467888543 2221 123455444432 245799999999999999
Q ss_pred HHHHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHH
Q 009917 218 IAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADI 297 (522)
Q Consensus 218 ia~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (522)
+|..++..+.+ ||++.|+. ++|..+ .- +...+
T Consensus 238 ~A~~~~~lG~~---VTii~~~~--~L~~~D-------~e--------------------------------i~~~l---- 269 (542)
T 4b1b_A 238 CSGFLNSLGYD---VTVAVRSI--VLRGFD-------QQ--------------------------------CAVKV---- 269 (542)
T ss_dssp HHHHHHHHTCC---EEEEESSC--SSTTSC-------HH--------------------------------HHHHH----
T ss_pred HHHHHHhcCCe---EEEecccc--cccccc-------hh--------------------------------HHHHH----
Confidence 99999999875 99998854 455543 00 01111
Q ss_pred hhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC--c--EEEcCCCceecccEEEEec
Q 009917 298 KKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--G--IVVDGQTTPLKTDLVILAT 372 (522)
Q Consensus 298 ~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~--g--v~~~dG~~~~~~D~VI~aT 372 (522)
.+.+++.+|+++.+. +.++... + |.+.++++ +.+|.|++||
T Consensus 270 ---------------------------------~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~-~~~D~vLvAv 315 (542)
T 4b1b_A 270 ---------------------------------KLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTS-ELYDTVLYAI 315 (542)
T ss_dssp ---------------------------------HHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCE-EEESEEEECS
T ss_pred ---------------------------------HHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCe-EEEEEEEEcc
Confidence 112333345555554 4444332 2 56778888 8999999999
Q ss_pred CCCCCcccccccccccccccccC-CCCCCcccceeecCCCCCceEEEcccCC--cchhhhHHHHHHHHHHHHcCC
Q 009917 373 GFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYREIIHPQIPQLAIIGFSES--ISNLYTSEMRCRWLAELLDGA 444 (522)
Q Consensus 373 G~~~~~~l~~~~~~~~l~~~~~~-~~~~~~~ly~~~~~~~~pnl~~iG~~~~--~~~~~~~e~qa~~ia~~l~g~ 444 (522)
|.+|+...+.. +....+ ...+........+.++.||+|++|.+.. +...+.+..|++.++..+.|.
T Consensus 316 GR~Pnt~~L~l------e~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 316 GRKGDIDGLNL------ESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKD 384 (542)
T ss_dssp CEEESCGGGCG------GGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred cccCCccccCc------ccceeeecccCceEeccccccccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhcC
Confidence 99999765432 111111 1122222334456688999999997753 345678999999999988764
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.91 E-value=1.1e-24 Score=224.19 Aligned_cols=172 Identities=23% Similarity=0.229 Sum_probs=119.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHh-c------CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLL-K------GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDF 73 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~-~------g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (522)
|.+++|+|||||++|+++|..|++ . |.+|+|||+.+.+||.|.+.. .+.+
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv-----------------------~p~~ 57 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGV-----------------------APDH 57 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTS-----------------------CTTC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcccccc-----------------------CCCC
Confidence 777899999999999999999999 7 999999999999999886410 1223
Q ss_pred CChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCE
Q 009917 74 PDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDF 153 (522)
Q Consensus 74 ~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~ 153 (522)
+...++..++.++++++++ .+..+++| .. .|++.++ ++.||+
T Consensus 58 ~~~~~~~~~~~~~~~~~~v--~~~~~v~v-----~~-------------------------~v~~~~~------~~~~d~ 99 (456)
T 1lqt_A 58 PKIKSISKQFEKTAEDPRF--RFFGNVVV-----GE-------------------------HVQPGEL------SERYDA 99 (456)
T ss_dssp TGGGGGHHHHHHHHTSTTE--EEEESCCB-----TT-------------------------TBCHHHH------HHHSSE
T ss_pred CCHHHHHHHHHHHHhcCCC--EEEeeEEE-----CC-------------------------EEEECCC------eEeCCE
Confidence 3446778888888887765 44444321 11 1333332 368999
Q ss_pred EEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCC----CCchH-hhhhccCCCEEEEEcCCCCHHHHHHHHhhhc--
Q 009917 154 VILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYS----DMDYE-AAANLVKGKRVTVVGLQKSALDIAMECTTAN-- 226 (522)
Q Consensus 154 lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~----~~~~~-~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~-- 226 (522)
||+|||+. .|+.|.+| |.+ +.| ++|+.++. ..... .....+++++|+|||+|.+|+|+|..|++..
T Consensus 100 lViAtG~~--~~~~~~ip---G~~-~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~ 172 (456)
T 1lqt_A 100 VIYAVGAQ--SDRMLNIP---GED-LPG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDV 172 (456)
T ss_dssp EEECCCCC--EECCCCCT---TTT-STT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHH
T ss_pred EEEeeCCC--CCCCCCCC---CCC-CCC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhh
Confidence 99999963 36677788 765 455 66665441 00000 0011347899999999999999999998741
Q ss_pred ----------------CCCCceEEEEcccc
Q 009917 227 ----------------GLENPCTVLYRTEH 240 (522)
Q Consensus 227 ----------------~~~~~Vt~v~r~~~ 240 (522)
...++|+++.|++.
T Consensus 173 l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 173 LARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp HTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred hcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 01246999999875
No 83
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.91 E-value=2.9e-25 Score=228.33 Aligned_cols=299 Identities=14% Similarity=0.154 Sum_probs=186.3
Q ss_pred CC-CCcEEEECCChhHHHHHHHHHh---cCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCCh
Q 009917 1 ME-KKQIAIVGAGVSGLLACKYLLL---KGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDH 76 (522)
Q Consensus 1 m~-~~~vvIIGaG~aGl~~a~~l~~---~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (522)
|. .++|+|||||++|+++|..|++ .|++|+|||+++..... ...+. + .......
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~--~~~~~-----------~---------~~g~~~~ 58 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFV--PSNPW-----------V---------GVGWKER 58 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECG--GGHHH-----------H---------HHTSSCH
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCccc--CCccc-----------c---------ccCccCH
Confidence 44 3699999999999999999999 79999999998743110 00000 0 0112234
Q ss_pred hHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEE
Q 009917 77 NQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVIL 156 (522)
Q Consensus 77 ~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvv 156 (522)
+++..++.+++++.++ .+. .++|+.++... ..|++.++ +++.||+||+
T Consensus 59 ~~~~~~l~~~~~~~gv--~~~-~~~v~~id~~~------------------------~~V~~~~g-----~~i~~d~lvi 106 (437)
T 3sx6_A 59 DDIAFPIRHYVERKGI--HFI-AQSAEQIDAEA------------------------QNITLADG-----NTVHYDYLMI 106 (437)
T ss_dssp HHHEEECHHHHHTTTC--EEE-CSCEEEEETTT------------------------TEEEETTS-----CEEECSEEEE
T ss_pred HHHHHHHHHHHHHCCC--EEE-EeEEEEEEcCC------------------------CEEEECCC-----CEEECCEEEE
Confidence 5666667777777777 554 56899988654 36777765 5799999999
Q ss_pred eecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHh--hhhccCCCEEEEEcCCCCH------HHHHHHHhh----
Q 009917 157 CVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEA--AANLVKGKRVTVVGLQKSA------LDIAMECTT---- 224 (522)
Q Consensus 157 AtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~--~~~~~~gk~VvVIG~G~sg------~dia~~l~~---- 224 (522)
|||+ .|+.|.+| |.+.+.+..++...+.+..... .....++++++|||+|.+| +|+|..++.
T Consensus 107 AtG~---~~~~~~ip---G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~ 180 (437)
T 3sx6_A 107 ATGP---KLAFENVP---GSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKK 180 (437)
T ss_dssp CCCC---EECGGGST---TCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCC---CcCcccCC---CCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHH
Confidence 9994 57788888 7776544444433332211000 0011235678999996654 888866653
Q ss_pred hcCC-CCc-eEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhcc
Q 009917 225 ANGL-ENP-CTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (522)
Q Consensus 225 ~~~~-~~~-Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (522)
.+.. ..+ |+++.+.+. +.+.. ..+.+.
T Consensus 181 ~g~~~~~~~Vtlv~~~~~-~~~~~-l~~~~~------------------------------------------------- 209 (437)
T 3sx6_A 181 RGMRDKIPSFTFITSEPY-IGHLG-IQGVGD------------------------------------------------- 209 (437)
T ss_dssp TTCGGGCSCEEEEESSSS-TTCTT-TTCCTT-------------------------------------------------
T ss_pred cCCcccCcEEEEEcCCcc-ccccc-cCcchH-------------------------------------------------
Confidence 2211 012 999998775 21110 001110
Q ss_pred ccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCcEEEcC---------CCceecccEEEEec
Q 009917 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDG---------QTTPLKTDLVILAT 372 (522)
Q Consensus 303 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~~d---------G~~~~~~D~VI~aT 372 (522)
....+.+.+++.+|+++.+. +.+++++++++++ +++ +++|.||+|+
T Consensus 210 -----------------------~~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~-i~~D~vv~~~ 265 (437)
T 3sx6_A 210 -----------------------SKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMV-LPVKFGMMIP 265 (437)
T ss_dssp -----------------------HHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEE-EECSEEEEEC
T ss_pred -----------------------HHHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceE-EEEeEEEEcC
Confidence 00011123445567777665 7888888877764 556 9999999999
Q ss_pred CCCCCcccccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCCc-------------chhhhHHHHHHHHHH
Q 009917 373 GFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSESI-------------SNLYTSEMRCRWLAE 439 (522)
Q Consensus 373 G~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-------------~~~~~~e~qa~~ia~ 439 (522)
|+.+...+.+.. . + .++.+.+.....+..+++||+|++|.+... -....+..|++.+|.
T Consensus 266 g~~~~~~~~~~~---g----l-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ 337 (437)
T 3sx6_A 266 AFKGVPAVAGVE---G----L-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVH 337 (437)
T ss_dssp CEECCHHHHTST---T----T-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHH
T ss_pred CCcCchhhhccc---c----c-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHH
Confidence 999875443210 0 1 133455556665666689999999965431 235578888888877
Q ss_pred HHc
Q 009917 440 LLD 442 (522)
Q Consensus 440 ~l~ 442 (522)
.|.
T Consensus 338 ni~ 340 (437)
T 3sx6_A 338 NIK 340 (437)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 84
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.90 E-value=9.9e-25 Score=227.31 Aligned_cols=314 Identities=12% Similarity=0.141 Sum_probs=179.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCccccccccccceeecCC-----ccceeecCCCCCCC-----C
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTP-----KQLYQFSDYPWPDS-----V 69 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~-----~~~~~~~~~~~~~~-----~ 69 (522)
..++|+|||||+||+++|..|++. |.+|+|||+++.++.. .+.++..+... ...+.|..++.... .
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~--r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYM--RPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBC--SGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCC--CCCCCHHhhcCCccchhhcccccccccccccccccc
Confidence 357899999999999999999886 8899999998776421 11111111000 00112222111100 0
Q ss_pred CCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEE
Q 009917 70 TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVH 149 (522)
Q Consensus 70 ~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~ 149 (522)
...|....++.+ ..+.++ .++++++|+.++... ++|++.++ +++
T Consensus 88 ~~~~~~~~~l~~-----~~~~gv--~~~~g~~v~~id~~~------------------------~~V~~~~g-----~~i 131 (493)
T 1m6i_A 88 PSFYVSAQDLPH-----IENGGV--AVLTGKKVVQLDVRD------------------------NMVKLNDG-----SQI 131 (493)
T ss_dssp GGGSBCTTTTTT-----STTCEE--EEEETCCEEEEEGGG------------------------TEEEETTS-----CEE
T ss_pred hHhhcchhhhhh-----hhcCCe--EEEcCCEEEEEECCC------------------------CEEEECCC-----CEE
Confidence 001111111110 123445 677788999998754 57888765 579
Q ss_pred EeCEEEEeecccCCCCCCCCCCCCCCCC--ccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcC
Q 009917 150 QVDFVILCVGRFSDVPNIPEFPPKKGPE--AFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANG 227 (522)
Q Consensus 150 ~~d~lvvAtG~~s~~p~~P~~p~~~g~~--~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~ 227 (522)
.||+||+|||+ .|+.|+++ +.. .+...+.+.....+... .......+|+|+|||+|.+|+|+|..|+..+.
T Consensus 132 ~yd~lviATGs---~p~~~~~~---~~~~~~~~~~v~~~~~~~d~~~-l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~ 204 (493)
T 1m6i_A 132 TYEKCLIATGG---TPRSLSAI---DRAGAEVKSRTTLFRKIGDFRS-LEKISREVKSITIIGGGFLGSELACALGRKAR 204 (493)
T ss_dssp EEEEEEECCCE---EECCCHHH---HTSCHHHHHTEEECCSHHHHHH-HHHHHHHCSEEEEECCSHHHHHHHHHHHHHHH
T ss_pred ECCEEEECCCC---CCCCCCCc---ccccccccCceEEEcCHHHHHH-HHHHhhcCCeEEEECCCHHHHHHHHHHHhhhh
Confidence 99999999995 46666554 321 11122322222211100 00122358999999999999999999987421
Q ss_pred C-CCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhcccccc
Q 009917 228 L-ENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKF 306 (522)
Q Consensus 228 ~-~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (522)
+ ..+|+++.+.+. ++++.. |. . +.
T Consensus 205 ~~g~~V~~v~~~~~-~~~~~l----~~--~--------------------------------~~---------------- 229 (493)
T 1m6i_A 205 ALGTEVIQLFPEKG-NMGKIL----PE--Y--------------------------------LS---------------- 229 (493)
T ss_dssp HHTCEEEEECSSSS-TTTTTS----CH--H--------------------------------HH----------------
T ss_pred hcCCEEEEEecCcc-cccccC----CH--H--------------------------------HH----------------
Confidence 0 135898887654 222211 10 0 00
Q ss_pred CCCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecC----cEEEcCCCceecccEEEEecCCCCCcccc
Q 009917 307 GMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVDGQTTPLKTDLVILATGFKGDVKLK 381 (522)
Q Consensus 307 ~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----gv~~~dG~~~~~~D~VI~aTG~~~~~~l~ 381 (522)
+.+.+.+++.+|+++.+. +.++..+ .|+++||++ +++|.||+|+|++++..++
T Consensus 230 ---------------------~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~-i~aD~Vv~a~G~~pn~~l~ 287 (493)
T 1m6i_A 230 ---------------------NWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRK-VETDHIVAAVGLEPNVELA 287 (493)
T ss_dssp ---------------------HHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCE-EEESEEEECCCEEECCTTH
T ss_pred ---------------------HHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCE-EECCEEEECCCCCccHHHH
Confidence 011123445567777664 6777532 377889988 9999999999999987654
Q ss_pred cccccccccccccCCCCCCcccceeecCCCCCceEEEcccCCc----------chhhhHHHHHHHHHHHHcCCC
Q 009917 382 NIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSESI----------SNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 382 ~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~----------~~~~~~e~qa~~ia~~l~g~~ 445 (522)
+....+ .....+.+.....+. + .||+|++|.+... ..+..+..|++.+|..+.|..
T Consensus 288 ~~~gl~------~~~~~ggi~Vd~~l~-t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~ 353 (493)
T 1m6i_A 288 KTGGLE------IDSDFGGFRVNAELQ-A-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAA 353 (493)
T ss_dssp HHHTCC------BCTTTCSEECCTTCE-E-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCC
T ss_pred HHcCCc------cccCCCcEEECCCcc-c-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 322111 001112222222222 2 4999999965431 123478999999999998753
No 85
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.90 E-value=1.2e-24 Score=236.65 Aligned_cols=279 Identities=19% Similarity=0.171 Sum_probs=177.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
.++|+|||||+|||++|..|++.|++|+|||+++.+||.|.. .+|+ ++....+.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg------------------------~~~~~~~~ 444 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPG------------------------LGEWSYHR 444 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTT------------------------CGGGHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCC------------------------hHHHHHHH
Confidence 368999999999999999999999999999999999998876 2221 11224556
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
+|+...++.+. ..+..++.+... ..|++.++ ..+.||+||+|||+
T Consensus 445 ~~~~~~i~~~~-----~~~~~~v~i~~~-------------------------~~v~~~~~-----~~~~~d~vviAtG~ 489 (729)
T 1o94_A 445 DYRETQITKLL-----KKNKESQLALGQ-------------------------KPMTADDV-----LQYGADKVIIATGA 489 (729)
T ss_dssp HHHHHHHHHHH-----HHSTTCEEECSC-------------------------CCCCHHHH-----HTSCCSEEEECCCE
T ss_pred HHHHHHHHHhh-----cccCCceEEEeC-------------------------eEEehhhc-----cccCCCEEEEcCCC
Confidence 66666555441 001111222111 11332222 34789999999997
Q ss_pred cCC-----CCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEc--CCCCHHHHHHHHhhhcCCCCceE
Q 009917 161 FSD-----VPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVG--LQKSALDIAMECTTANGLENPCT 233 (522)
Q Consensus 161 ~s~-----~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG--~G~sg~dia~~l~~~~~~~~~Vt 233 (522)
.+. .|+.|.+| |.+.|.+.++++.++.. .....+|+|+||| +|.+|+|+|..|++.+. +||
T Consensus 490 ~~~~~~~~~p~~~~ip---G~~~~~~~v~~~~~~l~------~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~---~Vt 557 (729)
T 1o94_A 490 RWNTDGTNCLTHDPIP---GADASLPDQLTPEQVMD------GKKKIGKRVVILNADTYFMAPSLAEKLATAGH---EVT 557 (729)
T ss_dssp EECSSCCCTTTSSCCT---TCCTTSTTEECHHHHHH------CCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC---EEE
T ss_pred CcccccccCccCCCCC---CccccCCCEEEHHHHhc------CCCCCCCeEEEEcCCCCchHHHHHHHHHHcCC---EEE
Confidence 521 15677777 87766556777665532 2345789999999 99999999999999865 499
Q ss_pred EEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCc
Q 009917 234 VLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHS 313 (522)
Q Consensus 234 ~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~ 313 (522)
++.|++ +.+... .+. ..+
T Consensus 558 lv~~~~--l~~~~~---~~~-------------------------------~~~-------------------------- 575 (729)
T 1o94_A 558 IVSGVH--LANYMH---FTL-------------------------------EYP-------------------------- 575 (729)
T ss_dssp EEESSC--TTHHHH---HTT-------------------------------CHH--------------------------
T ss_pred EEeccc--cccccc---ccc-------------------------------cHH--------------------------
Confidence 999877 322100 000 000
Q ss_pred ccccccccceeccCCcccccccCCcEEEeecC-ceeEecCcEEEc----CCCc------------------eecccEEEE
Q 009917 314 FLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVD----GQTT------------------PLKTDLVIL 370 (522)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~~----dG~~------------------~~~~D~VI~ 370 (522)
.+.+.+++.+|+++.+. +.++.++++++. ++.+ .+++|.||+
T Consensus 576 ---------------~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~ 640 (729)
T 1o94_A 576 ---------------NMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVL 640 (729)
T ss_dssp ---------------HHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEE
T ss_pred ---------------HHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEE
Confidence 01112233345555443 555555544332 2222 279999999
Q ss_pred ecCCCCCcccccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCCcchhhhHHHHHHHHHHHHcCCC
Q 009917 371 ATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSESISNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 371 aTG~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~~~~~~e~qa~~ia~~l~g~~ 445 (522)
|+|++++..+.+.+. . .. ...+.++.|++|++|.+..+..+..+..|++.+|..|.+.+
T Consensus 641 a~G~~p~~~l~~~l~-----~----~v-------d~~~~t~~~~VyAiGD~~~~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 641 VTGRHSECTLWNELK-----A----RE-------SEWAENDIKGIYLIGDAEAPRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp ESCEEECCHHHHHHH-----H----TG-------GGTGGGTCCEEEECGGGTSCCCHHHHHHHHHHHHHTTTSSC
T ss_pred CCCCCCChHHHHHHh-----h----hc-------ccccccCCCCeEEEeCccchhhHHHHHHHHHHHHHHhhhhc
Confidence 999999876543211 0 00 11123578999999977665566778999999999887643
No 86
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.89 E-value=1.6e-23 Score=226.41 Aligned_cols=273 Identities=19% Similarity=0.187 Sum_probs=172.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--cccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
+++|+|||||+||+++|..|++.|++|+|||+++.+||.|.. ..|+ .....++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~------------------------~~~~~~~~ 428 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPG------------------------KEEFYETL 428 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTT------------------------CTTHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCC------------------------HHHHHHHH
Confidence 478999999999999999999999999999999999998764 1111 11224556
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEE-EeCEEEEeec
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVH-QVDFVILCVG 159 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~-~~d~lvvAtG 159 (522)
+++...++++++ .+++++.|.. ..+ .||+||+|||
T Consensus 429 ~~~~~~~~~~gv--~~~~~~~v~~------------------------------------------~~~~~~d~lviAtG 464 (671)
T 1ps9_A 429 RYYRRMIEVTGV--TLKLNHTVTA------------------------------------------DQLQAFDETILASG 464 (671)
T ss_dssp HHHHHHHHHHTC--EEEESCCCCS------------------------------------------SSSCCSSEEEECCC
T ss_pred HHHHHHHHHcCC--EEEeCcEecH------------------------------------------HHhhcCCEEEEccC
Confidence 677777788887 6666653310 013 7999999999
Q ss_pred ccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEE----
Q 009917 160 RFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVL---- 235 (522)
Q Consensus 160 ~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v---- 235 (522)
+ .|+.|.+| |.+. ..++++.++.. .....+|+|+|||+|.+|+|+|..|++.+.. |+++
T Consensus 465 ~---~p~~~~i~---G~~~--~~v~~~~~~l~------~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~---vtv~~~~~ 527 (671)
T 1ps9_A 465 I---VPRTPPID---GIDH--PKVLSYLDVLR------DKAPVGNKVAIIGCGGIGFDTAMYLSQPGES---TSQNIAGF 527 (671)
T ss_dssp E---EECCCCCB---TTTS--TTEEEHHHHHT------SCCCCCSEEEEECCHHHHHHHHHHHTCCSSC---GGGCHHHH
T ss_pred C---CcCCCCCC---CCCC--CcEeeHHHHhh------CCCCCCCeEEEECCChhHHHHHHHHHhcCCC---cccchhhh
Confidence 4 57888888 7654 23666554432 1235789999999999999999999976643 4421
Q ss_pred -----------Ecccce-eecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccc
Q 009917 236 -----------YRTEHW-NIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (522)
Q Consensus 236 -----------~r~~~~-~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (522)
.+.+.- +.|....... ....
T Consensus 528 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------~v~l 559 (671)
T 1ps9_A 528 CNEWGIDSSLQQAGGLSPQGMQIPRSPR------------------------------------------------QIVM 559 (671)
T ss_dssp HHHTTBCTTCCSGGGBCTTCCCCCCCSS------------------------------------------------EEEE
T ss_pred hhhhcccccccccccccccccccCCCCc------------------------------------------------EEEE
Confidence 111000 0000000000 0000
Q ss_pred cccCCCCCCcccccccccce-eccCCcccccccCCcEEEeecC-ceeEecCcEEE-cCC--CceecccEEEEecCCCCCc
Q 009917 304 AKFGMVPKHSFLQELSSCLT-ITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVV-DGQ--TTPLKTDLVILATGFKGDV 378 (522)
Q Consensus 304 ~~~~l~p~~~~~~~~~~~~~-~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~-~dG--~~~~~~D~VI~aTG~~~~~ 378 (522)
+.+....+ +... ......+.+.+++.+|+++.+. +.+++++++++ .+| ++ +++|.||+|||++++.
T Consensus 560 ----~~~~~~~l----~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~-i~~D~Vi~a~G~~p~~ 630 (671)
T 1ps9_A 560 ----LQRKASKP----GQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQV-LAVDNVVICAGQEPNR 630 (671)
T ss_dssp ----ECSSCSCT----TTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEE-ECCSEEEECCCEEECC
T ss_pred ----EEecchhh----ccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEE-EeCCEEEECCCccccH
Confidence 00000000 0000 0000112344666788888876 88888888888 688 45 9999999999999986
Q ss_pred ccccccccccccccccCCCCCCcccceeecCCCCCceEEEcccCCcc--hhhhHHHHHHHHHHHH
Q 009917 379 KLKNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIPQLAIIGFSESIS--NLYTSEMRCRWLAELL 441 (522)
Q Consensus 379 ~l~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~--~~~~~e~qa~~ia~~l 441 (522)
.+.+. ++ ...+++|++|...... ....+..|++.+|..|
T Consensus 631 ~l~~~-----l~-------------------~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 631 ALAQP-----LI-------------------DSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp TTHHH-----HH-------------------TTTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred HHHHH-----HH-------------------hcCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 54321 11 0126899999765433 3667889999988753
No 87
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.88 E-value=1.2e-22 Score=226.85 Aligned_cols=293 Identities=14% Similarity=0.134 Sum_probs=177.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
+||+|||||+||+++|..|++.|++|+|||+++.+||+|..+ +...+ ... ...++..++
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~-~k~~i-------------------~~~-~~~~~~~~~ 187 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDT-AGEQI-------------------DGM-DSSAWIEQV 187 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGS-SCCEE-------------------TTE-EHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccC-Ccccc-------------------CCC-CHHHHHHHH
Confidence 689999999999999999999999999999999999988731 11000 001 123444444
Q ss_pred HHHHHhc-CCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCC-CCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK-NHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~g~~~~~~~d~lvvAtG~~ 161 (522)
.+...++ ++ .++.+++|..+...... ..... ..+.+.+...+.. .+...++.||+||+|||+
T Consensus 188 ~~~l~~~~~v--~~~~~~~V~~i~~~~~~-------~~v~~------~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs- 251 (965)
T 2gag_A 188 TSELAEAEET--THLQRTTVFGSYDANYL-------IAAQR------RTVHLDGPSGPGVSRERIWHIRAKQVVLATGA- 251 (965)
T ss_dssp HHHHHHSTTE--EEESSEEEEEEETTTEE-------EEEEE------CSTTCSSCCCTTCCSEEEEEEEEEEEEECCCE-
T ss_pred HHHHhhcCCc--EEEeCCEEEeeecCCce-------eeeEe------ecccccccccccCCCCceEEEECCEEEECCCC-
Confidence 4444443 66 67788899888643200 00000 0000111110000 012247899999999995
Q ss_pred CCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccce
Q 009917 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHW 241 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~ 241 (522)
.|+.|.+| |.+. .| ++++....... .......+|+|+|||+|.+|+|+|..|+..+.+ |+++.+++.
T Consensus 252 --~p~~~~ip---G~~~-~g-v~~~~~~~~~l--~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~---Vtvv~~~~~- 318 (965)
T 2gag_A 252 --HERPIVFE---NNDR-PG-IMLAGAVRSYL--NRYGVRAGARIAVATTNDSAYELVRELAATGGV---VAVIDARSS- 318 (965)
T ss_dssp --EECCCCCB---TCCS-TT-EEEHHHHHHHH--HTTCEESCSSEEEEESSTTHHHHHHHHGGGTCC---SEEEESCSS-
T ss_pred --ccCCCCCC---CCCC-CC-EEEhHHHHHHH--HhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCc---EEEEECCCc-
Confidence 46777777 6543 33 55543321110 001235689999999999999999999998754 999998775
Q ss_pred eecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccccccc
Q 009917 242 NIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSC 321 (522)
Q Consensus 242 ~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 321 (522)
+++.
T Consensus 319 ~~~~---------------------------------------------------------------------------- 322 (965)
T 2gag_A 319 ISAA---------------------------------------------------------------------------- 322 (965)
T ss_dssp CCHH----------------------------------------------------------------------------
T ss_pred cchh----------------------------------------------------------------------------
Confidence 1100
Q ss_pred ceeccCCcccccccCCcEEEeecC-ceeEec--C----cEEEcC-------C--CceecccEEEEecCCCCCcccccccc
Q 009917 322 LTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--D----GIVVDG-------Q--TTPLKTDLVILATGFKGDVKLKNIFL 385 (522)
Q Consensus 322 ~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~----gv~~~d-------G--~~~~~~D~VI~aTG~~~~~~l~~~~~ 385 (522)
.+.+++.+|+++.+. +.++.. + +|++.+ | ++ +++|.||+|+|++|+..++....
T Consensus 323 ---------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~-i~~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 323 ---------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQR-FEADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp ---------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEE-EECSEEEEECCEEECCHHHHHTT
T ss_pred ---------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEE-EEcCEEEECCCcCcChHHHHhCC
Confidence 001122334454443 455543 2 466654 5 45 99999999999999976543210
Q ss_pred cccccccccCCCCCCccccee-ecCCCCCceEEEcccCCcchhhhHHHHHHHHHHHHc
Q 009917 386 SQTFQDYLAGSPTEKLPLYRE-IIHPQIPQLAIIGFSESISNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 386 ~~~l~~~~~~~~~~~~~ly~~-~~~~~~pnl~~iG~~~~~~~~~~~e~qa~~ia~~l~ 442 (522)
. .+..++. .+. +-.++.||||++|.+.....+..+..|++.+|..+.
T Consensus 393 g-----~i~vd~~-----~~~~v~~ts~p~IyAaGD~a~~~~l~~A~~~G~~aA~~i~ 440 (965)
T 2gag_A 393 G-----KLDWDTT-----IHAFVPADAVANQHLAGAMTGRLDTASALSTGAATGAAAA 440 (965)
T ss_dssp C-----CEEEETT-----TTEEEECSCCTTEEECGGGGTCCSHHHHHHHHHHHHHHHH
T ss_pred C-----cEEEcCc-----ccccccCCCCCCEEEEEecCCchhHHHHHHHHHHHHHHHH
Confidence 0 0000110 011 113678999999976654445578888888888764
No 88
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.88 E-value=4e-23 Score=212.73 Aligned_cols=169 Identities=21% Similarity=0.223 Sum_probs=117.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcC--CceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g--~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
.++|+|||||++|+++|..|++.| .+|+|||+.+.+||.|.... .+.++...++.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~-----------------------~p~~~~~~~~~ 62 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGV-----------------------APDHPEVKNVI 62 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTS-----------------------CTTCGGGGGHH
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeeccc-----------------------CCCCccHHHHH
Confidence 478999999999999999999988 89999999999998886511 11223335678
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
.++.++++++++ .+++++.|. . .|++.+ .++.||+||+|||+
T Consensus 63 ~~~~~~~~~~gv--~~~~~~~v~-----~-------------------------~V~~~~------~~~~~d~lVlAtGs 104 (460)
T 1cjc_A 63 NTFTQTARSDRC--AFYGNVEVG-----R-------------------------DVTVQE------LQDAYHAVVLSYGA 104 (460)
T ss_dssp HHHHHHHTSTTE--EEEBSCCBT-----T-------------------------TBCHHH------HHHHSSEEEECCCC
T ss_pred HHHHHHHHhCCc--EEEeeeEEe-----e-------------------------EEEecc------ceEEcCEEEEecCc
Confidence 888888888877 566665441 1 132222 23689999999996
Q ss_pred cCCCCCCCCCCCCCCCCccCceEEeeccCCCC-----chHhhhhccCCCEEEEEcCCCCHHHHHHHHhh-----------
Q 009917 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDM-----DYEAAANLVKGKRVTVVGLQKSALDIAMECTT----------- 224 (522)
Q Consensus 161 ~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~-----~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~----------- 224 (522)
. .++.|++| |.+ ..| ++++.++..+ +.........+|+|+|||+|.+|+|+|..|++
T Consensus 105 ~--~~~~~~ip---G~~-~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~ 177 (460)
T 1cjc_A 105 E--DHQALDIP---GEE-LPG-VFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDIT 177 (460)
T ss_dssp C--EECCCCCT---TTT-STT-EEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCC
T ss_pred C--CCCCCCCC---CCC-CCc-EEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhcccccc
Confidence 4 24677788 764 333 5555444110 00000112468999999999999999999984
Q ss_pred ---------hcCCCCceEEEEcccce
Q 009917 225 ---------ANGLENPCTVLYRTEHW 241 (522)
Q Consensus 225 ---------~~~~~~~Vt~v~r~~~~ 241 (522)
.+. ++|+++.|++..
T Consensus 178 ~~a~~~l~~~g~--~~V~lv~r~~~~ 201 (460)
T 1cjc_A 178 EAALGALRQSRV--KTVWIVGRRGPL 201 (460)
T ss_dssp HHHHHHHHTCCC--CEEEEECSSCGG
T ss_pred HHHHHHHhhCCC--cEEEEEEcCChH
Confidence 222 369999998763
No 89
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.87 E-value=2.8e-23 Score=213.12 Aligned_cols=292 Identities=12% Similarity=0.105 Sum_probs=172.2
Q ss_pred CcEEEECCChhHHHHHHHHHh--cCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLL--KGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~--~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
++|+|||||++|+++|..|++ .|++|+|||+++.+++.... +... .......++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~--~~~~--------------------~g~~~~~~~~~ 60 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAF--PHLA--------------------MGWRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGH--HHHH--------------------HTCSCGGGSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCc--chhc--------------------cCccCHHHHHH
Confidence 699999999999999999999 78999999999876532111 0000 00001122222
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
++.+++++.++ .+.. .+|+.++... ..|++.++ .++.||+||+|||.
T Consensus 61 ~~~~~~~~~gv--~~~~-~~v~~id~~~------------------------~~v~~~~g-----~~i~~d~liiAtG~- 107 (430)
T 3h28_A 61 PLAPLLPKFNI--EFIN-EKAESIDPDA------------------------NTVTTQSG-----KKIEYDYLVIATGP- 107 (430)
T ss_dssp ESTTTGGGGTE--EEEC-SCEEEEETTT------------------------TEEEETTC-----CEEECSEEEECCCC-
T ss_pred HHHHHHHhcCC--EEEE-EEEEEEECCC------------------------CEEEECCC-----cEEECCEEEEcCCc-
Confidence 33334455665 4543 5888887653 25776665 47899999999994
Q ss_pred CCCCCCCCCCCCCCCCccCceEEeeccCCCCchH--hhhhccCCCEEEEEcCCCCH------HHHHHHHhh----hcCC-
Q 009917 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYE--AAANLVKGKRVTVVGLQKSA------LDIAMECTT----ANGL- 228 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~--~~~~~~~gk~VvVIG~G~sg------~dia~~l~~----~~~~- 228 (522)
.|..| |... .+...+...+.+.... ......++++++|||+|.+| +|+|..++. .+..
T Consensus 108 --~~~~p------g~~~-~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~ 178 (430)
T 3h28_A 108 --KLVFG------AEGQ-EENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRY 178 (430)
T ss_dssp --EEECC------SBTH-HHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGG
T ss_pred --ccccC------CCCC-cCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcc
Confidence 45555 3321 1211121111111000 00111235678899998765 898866653 2210
Q ss_pred CCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCC
Q 009917 229 ENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGM 308 (522)
Q Consensus 229 ~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 308 (522)
..+|+++.+.+. +.+.. ..+.+.
T Consensus 179 ~~~V~~v~~~~~-~~~~~-l~~~~~------------------------------------------------------- 201 (430)
T 3h28_A 179 KVPMTFITSEPY-LGHFG-VGGIGA------------------------------------------------------- 201 (430)
T ss_dssp GCCEEEECSSSS-TTCTT-TTCSTT-------------------------------------------------------
T ss_pred ceEEEEecCCcc-ccccc-cCcchH-------------------------------------------------------
Confidence 024888887664 21110 000000
Q ss_pred CCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEecCcEEEcC----CCceecccEEEEecCCCCCcccccc
Q 009917 309 VPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDG----QTTPLKTDLVILATGFKGDVKLKNI 383 (522)
Q Consensus 309 ~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~gv~~~d----G~~~~~~D~VI~aTG~~~~~~l~~~ 383 (522)
....+.+.+++.+|+++.+. +++++++++++++ |++ +++|.||+|+|++++..+.+.
T Consensus 202 -----------------~~~~l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~-i~~D~vv~a~G~~~~~~l~~~ 263 (430)
T 3h28_A 202 -----------------SKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHE-VPAKFTMFMPSFQGPEVVASA 263 (430)
T ss_dssp -----------------HHHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEE-EECSEEEEECEEECCHHHHTT
T ss_pred -----------------HHHHHHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceE-EeeeEEEECCCCccchhHhhc
Confidence 00111233455577888776 8888888888887 677 999999999999986433221
Q ss_pred cccccccccccCCCCC-CcccceeecCCCCCceEEEcccCCc-------------chhhhHHHHHHHHHHHH
Q 009917 384 FLSQTFQDYLAGSPTE-KLPLYREIIHPQIPQLAIIGFSESI-------------SNLYTSEMRCRWLAELL 441 (522)
Q Consensus 384 ~~~~~l~~~~~~~~~~-~~~ly~~~~~~~~pnl~~iG~~~~~-------------~~~~~~e~qa~~ia~~l 441 (522)
. .. + .++.+ .+.+...+..+++||||++|.+... -....+..|++.+|..|
T Consensus 264 -~----~g-l-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni 328 (430)
T 3h28_A 264 -G----DK-V-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNI 328 (430)
T ss_dssp -C----TT-T-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHH
T ss_pred -c----cc-C-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHH
Confidence 0 00 1 13344 4555555556689999999965432 23567888888877754
No 90
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.85 E-value=1.6e-21 Score=219.34 Aligned_cols=174 Identities=17% Similarity=0.269 Sum_probs=116.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC-ceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
++|+|||||+||+++|..|++.|+ +|+|||+.+.+||.+.+..|. |....++.++
T Consensus 188 ~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~------------------------~~~~~~~~~~ 243 (1025)
T 1gte_A 188 AKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQ------------------------FRLPYDVVNF 243 (1025)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCT------------------------TTSCHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCc------------------------ccCCHHHHHH
Confidence 689999999999999999999999 799999999999986542221 1111356677
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
..++.+++++ .+++++.|.. +.|++.++ .++.||+||+|||+.
T Consensus 244 ~~~~~~~~gv--~~~~~~~v~~-----------------------------~~v~~~~~-----~~~~~d~vvlAtGa~- 286 (1025)
T 1gte_A 244 EIELMKDLGV--KIICGKSLSE-----------------------------NEITLNTL-----KEEGYKAAFIGIGLP- 286 (1025)
T ss_dssp HHHHHHTTTC--EEEESCCBST-----------------------------TSBCHHHH-----HHTTCCEEEECCCCC-
T ss_pred HHHHHHHCCc--EEEcccEecc-----------------------------ceEEhhhc-----CccCCCEEEEecCCC-
Confidence 7777788887 6777655421 11333332 346799999999962
Q ss_pred CCCCCCCC-CCCCCCCccCceEEeeccCCCCchHh---------hhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCce
Q 009917 163 DVPNIPEF-PPKKGPEAFHGKVIHSMDYSDMDYEA---------AANLVKGKRVTVVGLQKSALDIAMECTTANGLENPC 232 (522)
Q Consensus 163 ~~p~~P~~-p~~~g~~~f~g~~~hs~~~~~~~~~~---------~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~V 232 (522)
.|+.+++ + |.+...| ++++.+|....... ......+++|+|||+|.+|+|+|..+++.+. ++|
T Consensus 287 -~p~~l~~~~---G~~~~~g-v~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~--~~V 359 (1025)
T 1gte_A 287 -EPKTDDIFQ---GLTQDQG-FYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGA--RRV 359 (1025)
T ss_dssp -EECCCGGGT---TCCTTTT-EEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTC--SEE
T ss_pred -CCCCCCCCC---CCCCCCC-EEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCC--CEE
Confidence 3555443 4 4443333 55544442110000 0012346799999999999999999998764 359
Q ss_pred EEEEcccceeecC
Q 009917 233 TVLYRTEHWNIPD 245 (522)
Q Consensus 233 t~v~r~~~~~~p~ 245 (522)
|++.|++..++|.
T Consensus 360 tvv~r~~~~~~~~ 372 (1025)
T 1gte_A 360 FLVFRKGFVNIRA 372 (1025)
T ss_dssp EEECSSCGGGCCS
T ss_pred EEEEecChhhCCC
Confidence 9999987544443
No 91
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.84 E-value=2.2e-22 Score=206.15 Aligned_cols=102 Identities=12% Similarity=0.120 Sum_probs=66.7
Q ss_pred ccCCcEEEeecC-ceeEecCcEEEcC--C--CceecccEEEEecCCCCCcccccccccccccccccCCCCCCcccceeec
Q 009917 334 VEEGSIILKKSQ-DFSFCEDGIVVDG--Q--TTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYREII 408 (522)
Q Consensus 334 l~~g~v~v~~~~-i~~~~~~gv~~~d--G--~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ly~~~~ 408 (522)
+++.+|+++.+. +++++++++++++ | ++ +++|.||+|+|.+++..+.+. ..+ ...+..+.+.....+.
T Consensus 210 l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~-i~~d~vi~~~G~~~~~~~~~~-~~~-----l~~~~~g~i~vd~~lq 282 (430)
T 3hyw_A 210 FAERNIDWIANVAVKAIEPDKVIYEDLNGNTHE-VPAKFTMFMPSFQGPEVVASA-GDK-----VANPANKMVIVNRCFQ 282 (430)
T ss_dssp HHHTTCEEECSCEEEEECSSEEEEECTTSCEEE-EECSEEEEECEEECCHHHHTT-CTT-----TBCTTTCCBCCCTTSB
T ss_pred HHhCCeEEEeCceEEEEeCCceEEEeeCCCceE-eecceEEEeccCCCchHHHhc-ccc-----cccCCceEEEeccccc
Confidence 445567888776 8889888888865 2 24 899999999999987432211 100 1111122333444555
Q ss_pred CCCCCceEEEcccCCc-------------chhhhHHHHHHHHHHHHc
Q 009917 409 HPQIPQLAIIGFSESI-------------SNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 409 ~~~~pnl~~iG~~~~~-------------~~~~~~e~qa~~ia~~l~ 442 (522)
++++||+|++|.+... -....+..||+++|..|.
T Consensus 283 ~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~ 329 (430)
T 3hyw_A 283 NPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp CSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHH
Confidence 6899999999955421 124578999999988664
No 92
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.84 E-value=7.5e-21 Score=193.33 Aligned_cols=292 Identities=12% Similarity=0.109 Sum_probs=165.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcC--CceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g--~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
|+|||||||+||+++|..|++.+ .+|+|||+++........ +.+ ... ..+.+++..
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~--~~v----~~g----------------~~~~~~~~~ 60 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMS--NEV----IGG----------------DRELASLRV 60 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTH--HHH----HHT----------------SSCGGGGEE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCH--HHH----hcC----------------CCCHHHHhh
Confidence 78999999999999999999865 589999998753211000 000 000 000011111
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
-++.+. ..++ ++ ...+|+.|+.+. ..|++.++ .++.||+||+|||+
T Consensus 61 ~~~~~~-~~gv--~~-i~~~v~~id~~~------------------------~~v~~~~g-----~~i~yd~LviAtG~- 106 (401)
T 3vrd_B 61 GYDGLR-AHGI--QV-VHDSALGIDPDK------------------------KLVKTAGG-----AEFAYDRCVVAPGI- 106 (401)
T ss_dssp CSHHHH-HTTC--EE-ECSCEEEEETTT------------------------TEEEETTS-----CEEECSEEEECCCE-
T ss_pred CHHHHH-HCCC--EE-EEeEEEEEEccC------------------------cEEEeccc-----ceeecceeeeccCC-
Confidence 111222 2454 33 345888988764 35777776 58999999999995
Q ss_pred CCCCCCCCCCCCCCCCccCc-eEEeeccCCC-CchH-hhhhccCCCEEEEEcCCCC-------HHH----HHHHHhhhcC
Q 009917 162 SDVPNIPEFPPKKGPEAFHG-KVIHSMDYSD-MDYE-AAANLVKGKRVTVVGLQKS-------ALD----IAMECTTANG 227 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g-~~~hs~~~~~-~~~~-~~~~~~~gk~VvVIG~G~s-------g~d----ia~~l~~~~~ 227 (522)
.++.|.+| |.+...+ ...|+....+ .... .....+...+.+|+|.|.. +.| ++..+...+.
T Consensus 107 --~~~~~~i~---G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~ 181 (401)
T 3vrd_B 107 --DLLYDKIE---GYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKS 181 (401)
T ss_dssp --EECGGGSB---TCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCT
T ss_pred --ccccCCcc---CchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCC
Confidence 56777777 6654322 1223222111 0000 0011233444455544432 334 4444444443
Q ss_pred CCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccC
Q 009917 228 LENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFG 307 (522)
Q Consensus 228 ~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (522)
. .+|+++.+.+... +. + . +...+.
T Consensus 182 ~-~~v~i~~~~~~~~-~~------~---~--------------------------------~~~~~~------------- 205 (401)
T 3vrd_B 182 K-SKVIILDNSQTFS-KQ------A---Q--------------------------------FTKGWE------------- 205 (401)
T ss_dssp T-CEEEEECSSSSCT-TH------H---H--------------------------------HHHHHH-------------
T ss_pred C-CEEEEEccccccc-cc------c---c--------------------------------ccHHHH-------------
Confidence 2 4688888765411 00 0 0 000000
Q ss_pred CCCCCcccccccccceeccCCcccccccCCcEEEeecC-ceeEec----CcEEEcCCCceecccEEEEecCCCCCccccc
Q 009917 308 MVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE----DGIVVDGQTTPLKTDLVILATGFKGDVKLKN 382 (522)
Q Consensus 308 l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~----~gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~ 382 (522)
..+...+++.+|+++.+. +..++. ..+.++||++ +++|.|++|+|.+++..+
T Consensus 206 --------------------~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~-i~~D~vi~~~g~~~~~~~-- 262 (401)
T 3vrd_B 206 --------------------RLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGET-FKAAVINLIPPQRAGKIA-- 262 (401)
T ss_dssp --------------------HHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCE-EECSEEEECCCEEECHHH--
T ss_pred --------------------HHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcE-EEeeEEEEecCcCCchhH--
Confidence 011234566678887765 555543 2388899998 999999999999876321
Q ss_pred ccccccccccccCCCCCCccccee-ecCCCCCceEEEcccCCc----chhhhHHHHHHHHHHHHc
Q 009917 383 IFLSQTFQDYLAGSPTEKLPLYRE-IIHPQIPQLAIIGFSESI----SNLYTSEMRCRWLAELLD 442 (522)
Q Consensus 383 ~~~~~~l~~~~~~~~~~~~~ly~~-~~~~~~pnl~~iG~~~~~----~~~~~~e~qa~~ia~~l~ 442 (522)
.+..+.++.+.+..... +.++++||+|++|.+... ...+.+..||+.+|..|.
T Consensus 263 -------~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~ 320 (401)
T 3vrd_B 263 -------QSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVV 320 (401)
T ss_dssp -------HHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHH
T ss_pred -------hhccccccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHH
Confidence 11122244455666555 457889999999965432 235678899988887653
No 93
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.82 E-value=2.8e-20 Score=193.74 Aligned_cols=262 Identities=16% Similarity=0.178 Sum_probs=162.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
+||+|||||++|+++|..|++. ++|+|||+++.+||.|...... +.. ++ . ...++ +
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~-----------~~g--~~-----~--~~~~~---~ 164 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK-----------QEG--FN-----K--DSRKV---V 164 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE-----------ETT--TT-----E--EHHHH---H
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc-----------cCC--CC-----C--CHHHH---H
Confidence 5899999999999999999999 9999999999999987752100 000 00 0 22333 3
Q ss_pred HHHHHhc--CCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHF--DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~--~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
..+.+.+ ++ .++++++|.+++... ..+.+...+. ++...+.||+||+|||+
T Consensus 165 ~~l~~~l~~~v--~~~~~~~v~~i~~~~----------------------~~~~~~~~~~--~~~~~~~~d~lvlAtGa- 217 (493)
T 1y56_A 165 EELVGKLNENT--KIYLETSALGVFDKG----------------------EYFLVPVVRG--DKLIEILAKRVVLATGA- 217 (493)
T ss_dssp HHHHHTCCTTE--EEETTEEECCCEECS----------------------SSEEEEEEET--TEEEEEEESCEEECCCE-
T ss_pred HHHHHHHhcCC--EEEcCCEEEEEEcCC----------------------cEEEEEEecC--CeEEEEECCEEEECCCC-
Confidence 3333433 44 567788998888754 3355544332 33457999999999995
Q ss_pred CCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccce
Q 009917 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHW 241 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~ 241 (522)
.|..|.+| |.+ ..| +++..++.... .......+++|+|||+|.+|+| ..+.+.+ |.+.....
T Consensus 218 --~~~~~~~~---g~~-~~g-v~~~~~~~~~~--~~~~~~~~~~vvViGgG~~gle--~~l~~~G-----V~v~~~~~-- 279 (493)
T 1y56_A 218 --IDSTMLFE---NND-MPG-VFRRDFALEVM--NVWEVAPGRKVAVTGSKADEVI--QELERWG-----IDYVHIPN-- 279 (493)
T ss_dssp --EECCCCCT---TTT-STT-EEEHHHHHHHH--HTSCBCSCSEEEEESTTHHHHH--HHHHHHT-----CEEEECSS--
T ss_pred --CccCCCCC---CCC-CCC-EEEcHHHHHHH--HhcccCCCCEEEEECCCHHHHH--HHHHhCC-----cEEEeCCe--
Confidence 46777777 654 233 44443322110 0011356799999999999999 3333332 44433211
Q ss_pred eecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhhhhHHHHHHHHHHHHhhhccccccCCCCCCccccccccc
Q 009917 242 NIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSC 321 (522)
Q Consensus 242 ~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 321 (522)
T Consensus 280 -------------------------------------------------------------------------------- 279 (493)
T 1y56_A 280 -------------------------------------------------------------------------------- 279 (493)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeccCCcccccccCCcEEEeecCceeEec----CcEEEcCCCceecccEEEEecCCCCCcccccccccccccccccCCC
Q 009917 322 LTITVPEKFYDKVEEGSIILKKSQDFSFCE----DGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSP 397 (522)
Q Consensus 322 ~~~~~~~~~~~~l~~g~v~v~~~~i~~~~~----~gv~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~~ 397 (522)
+.++.. .+|++++|++ +++|.||+|+|++++..++...... +. + ++
T Consensus 280 ------------------------v~~i~~~~~v~~v~~~~g~~-i~aD~Vv~a~G~~p~~~l~~~~g~~-~~--~--~~ 329 (493)
T 1y56_A 280 ------------------------VKRVEGNEKVERVIDMNNHE-YKVDALIFADGRRPDINPITQAGGK-LR--F--RR 329 (493)
T ss_dssp ------------------------EEEEECSSSCCEEEETTCCE-EECSEEEECCCEEECCHHHHHTTCC-EE--E--ET
T ss_pred ------------------------eEEEecCCceEEEEeCCCeE-EEeCEEEECCCcCcCchHHHhcCCC-cc--c--cC
Confidence 111111 1355778888 9999999999999997665432211 00 0 11
Q ss_pred CCCcccceeecCCCCCceEEEcccCCcchhhhHHHHHHHHHHHHcCCC
Q 009917 398 TEKLPLYREIIHPQIPQLAIIGFSESISNLYTSEMRCRWLAELLDGAV 445 (522)
Q Consensus 398 ~~~~~ly~~~~~~~~pnl~~iG~~~~~~~~~~~e~qa~~ia~~l~g~~ 445 (522)
.+.++.....+. +.||+|++|..........+..|++.++..+.+.+
T Consensus 330 ~g~i~~vd~~~~-s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 330 GYYSPVLDEYHR-IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp TEEEECCCTTSE-EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CceeeccccccC-cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHc
Confidence 111111111112 67999999977665556778889999988776543
No 94
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.41 E-value=1e-13 Score=140.00 Aligned_cols=136 Identities=19% Similarity=0.307 Sum_probs=89.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc----------c--ccceee-cCCcccee----e---
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK----------T--VETTML-QTPKQLYQ----F--- 60 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~----------~--~~~~~~-~~~~~~~~----~--- 60 (522)
|+++||+|||||++|+++|..|++.|.+|+|+|+++.+|+.|.. . .+...+ ..+..... |
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 34589999999999999999999999999999999888665431 0 000000 00000000 0
Q ss_pred --------cCCCCC-CCCCCCCC--ChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCC
Q 009917 61 --------SDYPWP-DSVTTDFP--DHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFG 129 (522)
Q Consensus 61 --------~~~~~~-~~~~~~~~--~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~ 129 (522)
...++. ..+...|+ ...++.+++.+.+++.++ .++++++|+++..++..
T Consensus 82 ~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv--~i~~~~~v~~i~~~~~g------------------ 141 (401)
T 2gqf_A 82 DFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGA--KILLRSEVSQVERIQND------------------ 141 (401)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTC--EEECSCCEEEEEECCSC------------------
T ss_pred HHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCC--EEEeCCEEEEEEcccCc------------------
Confidence 001110 00112233 567888999999999998 89999999999875200
Q ss_pred CCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 130 SRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 130 ~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
.++.|.|++.+ .++.+|+||+|||..+
T Consensus 142 ~~~~~~v~~~~------g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 142 EKVRFVLQVNS------TQWQCKNLIVATGGLS 168 (401)
T ss_dssp SSCCEEEEETT------EEEEESEEEECCCCSS
T ss_pred CCCeEEEEECC------CEEECCEEEECCCCcc
Confidence 01347776543 2689999999999873
No 95
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.27 E-value=1e-11 Score=122.87 Aligned_cols=129 Identities=21% Similarity=0.324 Sum_probs=90.3
Q ss_pred CcEEEECCChhHHHHHHHHHh---cCCceEEEecCCCcccccccc----ccceeecCCccceeecCC-------------
Q 009917 4 KQIAIVGAGVSGLLACKYLLL---KGFHPIVFEARSDIGGAWIKT----VETTMLQTPKQLYQFSDY------------- 63 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~---~g~~v~i~e~~~~~Gg~w~~~----~~~~~~~~~~~~~~~~~~------------- 63 (522)
+||+|||||++|+++|..|++ .|++|+|||+++.+||.|... +++..++.....+.....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 589999999999999999999 899999999999999987762 233333333322211110
Q ss_pred ------CCCCC--------CCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCC
Q 009917 64 ------PWPDS--------VTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFG 129 (522)
Q Consensus 64 ------~~~~~--------~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~ 129 (522)
++... ....|.....+..+.+.++++.+. .++++++|++|++.+
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~--~i~~~~~V~~i~~~~-------------------- 139 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGA--EVYFRHRVTQINLRD-------------------- 139 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTC--EEESSCCEEEEEECS--------------------
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCC--EEEeCCEEEEEEEcC--------------------
Confidence 11100 011222333455677777777776 899999999999864
Q ss_pred CCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 130 SRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 130 ~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
++|+|++.++ .++.||.||+|+...
T Consensus 140 --~~~~v~~~~g-----~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 140 --DKWEVSKQTG-----SPEQFDLIVLTMPVP 164 (342)
T ss_dssp --SSEEEEESSS-----CCEEESEEEECSCHH
T ss_pred --CEEEEEECCC-----CEEEcCEEEECCCHH
Confidence 4599988765 347999999999853
No 96
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.24 E-value=3e-11 Score=121.94 Aligned_cols=135 Identities=18% Similarity=0.231 Sum_probs=90.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc---c--------------------ccceeecCCccc
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK---T--------------------VETTMLQTPKQL 57 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~---~--------------------~~~~~~~~~~~~ 57 (522)
|+++||+|||||++|+++|..|++.|++|+|+|+.+.+|+.... . +.+..+..+...
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCC
Confidence 56689999999999999999999999999999999877653221 0 001111111110
Q ss_pred --eeecCCCCCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEE
Q 009917 58 --YQFSDYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT 135 (522)
Q Consensus 58 --~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (522)
..+........ .........+.++|.+.+.+.++ .++++++|++++..+ +.+.
T Consensus 82 ~~~~~~~~~~~~~-~~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~~~----------------------~~v~ 136 (397)
T 3cgv_A 82 RPIILQSEKAGNE-VGYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIKEN----------------------GKVA 136 (397)
T ss_dssp SCEEEC-----CC-CEEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEEET----------------------TEEE
T ss_pred EEEEEeccccCCc-eeEEEeHHHHHHHHHHHHHhCCC--EEEECCEEEEEEEeC----------------------CEEE
Confidence 11111000000 11223567888999999988888 899999999998764 4465
Q ss_pred -EEEecCCCCceeEEEeCEEEEeecccC
Q 009917 136 -VAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 136 -v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
|++.+. +...++.+|.||.|+|..|
T Consensus 137 gv~~~~~--~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 137 GAKIRHN--NEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEEEEET--TEEEEEEEEEEEECCCTTC
T ss_pred EEEEEEC--CeEEEEEcCEEEECCCcch
Confidence 777543 3346899999999999874
No 97
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.24 E-value=2.9e-11 Score=121.83 Aligned_cols=136 Identities=16% Similarity=0.193 Sum_probs=88.4
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccccc-------cc----------------ccceeecCCccc
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWI-------KT----------------VETTMLQTPKQL 57 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~-------~~----------------~~~~~~~~~~~~ 57 (522)
|+++||+||||||+|+++|..|++.|++|+||||++.+|.... .. ..+.++..+...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCc
Confidence 7889999999999999999999999999999999877653211 00 111111111111
Q ss_pred e--eecCCCCCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEE
Q 009917 58 Y--QFSDYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT 135 (522)
Q Consensus 58 ~--~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (522)
. .+........ ......+..+.++|.+.+.+.+. .++++++|+.+..++ +....
T Consensus 82 ~~~~~~~~~~~~~-~~~~i~R~~~~~~L~~~a~~~G~--~~~~~~~v~~~~~~~---------------------~~~~~ 137 (397)
T 3oz2_A 82 RPIILQSEKAGNE-VGYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIKEN---------------------GKVAG 137 (397)
T ss_dssp SCEEEECSSSSCC-CEEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEEET---------------------TEEEE
T ss_pred eEeeccccccCCc-eeEEEEHHHHHHHHHHHHHhcCc--EEeeeeeeeeeeecc---------------------ceeee
Confidence 0 0000000000 11123677888899999988888 899999999988764 11122
Q ss_pred EEEecCCCCceeEEEeCEEEEeecccC
Q 009917 136 VAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 136 v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+..... ++..++++|.||.|.|..|
T Consensus 138 v~~~~~--~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 138 AKIRHN--NEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEEEET--TEEEEEEEEEEEECCCTTC
T ss_pred eeeccc--ccceEEEEeEEEeCCcccc
Confidence 222222 5556799999999999875
No 98
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.24 E-value=2.4e-11 Score=123.08 Aligned_cols=133 Identities=13% Similarity=0.279 Sum_probs=88.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccccccc------------ccc-eeecCCccce----eec----
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKT------------VET-TMLQTPKQLY----QFS---- 61 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~------------~~~-~~~~~~~~~~----~~~---- 61 (522)
.+||+|||||++|+++|..|++.|.+|+|+|+++.+|+.+... .+. .....+.... .|.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 4799999999999999999999999999999999887655210 000 0000111000 000
Q ss_pred -------CCCCCC-CCCCCC--CChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCC
Q 009917 62 -------DYPWPD-SVTTDF--PDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSR 131 (522)
Q Consensus 62 -------~~~~~~-~~~~~~--~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (522)
..++.. .....| ....++.+.+.+.+++.++ .++++++|+++..++
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv--~i~~~~~V~~i~~~~---------------------- 162 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGV--QLRLETSIGEVERTA---------------------- 162 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTC--EEECSCCEEEEEEET----------------------
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCC--EEEECCEEEEEEEeC----------------------
Confidence 000000 001112 2456888899999998898 899999999998764
Q ss_pred CcEEEEEecCCCCceeEEEeCEEEEeecccCCCCC
Q 009917 132 GKWTVAVEDAKNHSTEVHQVDFVILCVGRFSDVPN 166 (522)
Q Consensus 132 ~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~~p~ 166 (522)
+.|.|++.++ ++.+|.||+|||..| .|.
T Consensus 163 ~~~~V~~~~g------~i~ad~VIlAtG~~S-~p~ 190 (417)
T 3v76_A 163 SGFRVTTSAG------TVDAASLVVASGGKS-IPK 190 (417)
T ss_dssp TEEEEEETTE------EEEESEEEECCCCSS-CGG
T ss_pred CEEEEEECCc------EEEeeEEEECCCCcc-CCC
Confidence 3477776542 689999999999884 443
No 99
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.22 E-value=5.1e-11 Score=117.42 Aligned_cols=129 Identities=16% Similarity=0.283 Sum_probs=83.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc-cccceeecCCccce------------------------
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLY------------------------ 58 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~-~~~~~~~~~~~~~~------------------------ 58 (522)
+||+|||||++|+++|..|++.|++|+|||+++.+||.+.. ...+..++.....+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 79999999999999999999999999999999999987765 22222222111100
Q ss_pred ----eecCCCCC--CCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCC
Q 009917 59 ----QFSDYPWP--DSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRG 132 (522)
Q Consensus 59 ----~~~~~~~~--~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (522)
.+....+. ......|.....+....+.+++ ++ .++++++|++++..+ +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~--~i~~~~~v~~i~~~~----------------------~ 136 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DM--PVSFSCRITEVFRGE----------------------E 136 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TC--CEECSCCEEEEEECS----------------------S
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cC--cEEecCEEEEEEEeC----------------------C
Confidence 00000000 0001112222234444555544 66 799999999999865 4
Q ss_pred cEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 133 KWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 133 ~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
.|.|++.++. ....+|+||+|+|..+
T Consensus 137 ~~~v~~~~g~----~~~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 137 HWNLLDAEGQ----NHGPFSHVIIATPAPQ 162 (336)
T ss_dssp CEEEEETTSC----EEEEESEEEECSCHHH
T ss_pred EEEEEeCCCc----CccccCEEEEcCCHHH
Confidence 5888876652 3335999999999863
No 100
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.22 E-value=9.2e-11 Score=104.57 Aligned_cols=108 Identities=21% Similarity=0.393 Sum_probs=80.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||||++|+.+|..|.+.|.+|+|+|+++..-..+ ..+..+..+ +......++.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~------------~~~~~~~~~-------~~~~~~~~~~~~l 62 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV------------SRVPNYPGL-------LDEPSGEELLRRL 62 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC------------SCCCCSTTC-------TTCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc------------hhhhccCCC-------cCCCCHHHHHHHH
Confidence 589999999999999999999999999999986321100 001111111 1123467899999
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+.++++++ .+.++ +|++++..+ +.|.|++.++ ++.+|.||+|+|..
T Consensus 63 ~~~~~~~gv--~v~~~-~v~~i~~~~----------------------~~~~v~~~~g------~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 63 EAHARRYGA--EVRPG-VVKGVRDMG----------------------GVFEVETEEG------VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHTTC--EEEEC-CCCEEEECS----------------------SSEEEECSSC------EEEEEEEEECCTTC
T ss_pred HHHHHHcCC--EEEeC-EEEEEEEcC----------------------CEEEEEECCC------EEEECEEEECCCCC
Confidence 999999998 88888 999998754 3477766442 68999999999954
No 101
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.21 E-value=7.5e-11 Score=109.80 Aligned_cols=123 Identities=22% Similarity=0.191 Sum_probs=81.8
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccce-eecCCCCCCCCCCCCCChhHH
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLY-QFSDYPWPDSVTTDFPDHNQV 79 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (522)
|..+||+|||||++|+++|..|++.|.+|+|+|++....|.|. .|...-.....++ .+.+ ..-+...++
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~--~~~~~~~~~~~~~~~~~d--------~~g~~~~~~ 70 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPF--LPPKPPFPPGSLLERAYD--------PKDERVWAF 70 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS--SCCCSCCCTTCHHHHHCC--------TTCCCHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCccc--CccccccchhhHHhhhcc--------CCCCCHHHH
Confidence 7778999999999999999999999999999999854333322 2211000000000 0000 001145678
Q ss_pred HHHHHHHHHhc-CCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 80 LDYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 80 ~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
.+++.+.++++ ++ .+. +++|+++...+ +..+.|.+.++ .++.+|.||+|+
T Consensus 71 ~~~l~~~~~~~~gv--~i~-~~~v~~i~~~~---------------------~~v~~v~~~~g-----~~i~a~~VV~A~ 121 (232)
T 2cul_A 71 HARAKYLLEGLRPL--HLF-QATATGLLLEG---------------------NRVVGVRTWEG-----PPARGEKVVLAV 121 (232)
T ss_dssp HHHHHHHHHTCTTE--EEE-ECCEEEEEEET---------------------TEEEEEEETTS-----CCEECSEEEECC
T ss_pred HHHHHHHHHcCCCc--EEE-EeEEEEEEEeC---------------------CEEEEEEECCC-----CEEECCEEEECC
Confidence 88999988887 76 555 67999998754 12245666554 468999999999
Q ss_pred cccC
Q 009917 159 GRFS 162 (522)
Q Consensus 159 G~~s 162 (522)
|.++
T Consensus 122 G~~s 125 (232)
T 2cul_A 122 GSFL 125 (232)
T ss_dssp TTCS
T ss_pred CCCh
Confidence 9763
No 102
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.18 E-value=1.9e-10 Score=117.09 Aligned_cols=135 Identities=20% Similarity=0.228 Sum_probs=88.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC----Cccccccc-cc--------------------cceeecCCccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS----DIGGAWIK-TV--------------------ETTMLQTPKQL 57 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~----~~Gg~w~~-~~--------------------~~~~~~~~~~~ 57 (522)
++||+|||||++|+++|..|++.|++|+|+|+.+ ..|..... .. .+.........
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 3799999999999999999999999999999986 23322111 00 01111111111
Q ss_pred ee--ecCCCCCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEE
Q 009917 58 YQ--FSDYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT 135 (522)
Q Consensus 58 ~~--~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (522)
.. |...............+..+.+.|.+.+.+.++ .++++++|++++..+ +.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv--~i~~~~~v~~i~~~~----------------------~~~~ 140 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGV--DVEYEVGVTDIKFFG----------------------TDSV 140 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTC--EEECSEEEEEEEEET----------------------TEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEeC----------------------CEEE
Confidence 11 111100000012234677888999999988888 899999999998864 3465
Q ss_pred EEEecCCCCceeEEEeCEEEEeecccC
Q 009917 136 VAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 136 v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+.+... +|+..++.+|.||.|+|..|
T Consensus 141 v~v~~~-~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 141 TTIEDI-NGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp EEEEET-TSCEEEEEEEEEEECCGGGC
T ss_pred EEEEcC-CCCEEEEEcCEEEECCCCch
Confidence 666543 25555799999999999874
No 103
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.15 E-value=2e-12 Score=127.07 Aligned_cols=150 Identities=14% Similarity=0.143 Sum_probs=93.7
Q ss_pred CcEEEECCChhHHHHHHHHHh--cCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLL--KGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~--~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
+||+|||||||||+||.+|++ .|++|+|||+++.+||.... .+.. ++ ...+..
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~--~~~~--------------~~---------~~~l~~ 120 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL--GGQL--------------FS---------AMVMRK 120 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC--CSTT--------------CC---------CEEEET
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe--CCcc--------------CC---------HHHHHH
Confidence 699999999999999999975 59999999999999987553 1100 00 001111
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..+.+++++ .+..+ . . .....+.++++++.
T Consensus 121 ~~~~~~~e~Gv--~~~~~---------~-------------------------------~-----~~~~~~~~~~~~~~- 152 (326)
T 3fpz_A 121 PAHLFLQELEI--PYEDE---------G-------------------------------D-----YVVVKHAALFISTV- 152 (326)
T ss_dssp TTHHHHHHTTC--CCEEC---------S-------------------------------S-----EEEESCHHHHHHHH-
T ss_pred HHHHHHHHcCC--EEEEC---------C-------------------------------c-----ceecceeEEEEcch-
Confidence 12233445555 22221 1 0 12333444555663
Q ss_pred CCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 162 s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.++.+.+| |.+.+.+.-......+. .....+++++|||+|.++++.|..+...+. ++++..+...
T Consensus 153 --~~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viggg~~av~~a~~~~~~~~---~v~i~~~~~~ 217 (326)
T 3fpz_A 153 --LSKVLQLP---NVKLFNATCVEDLVTRP------PTEKGEVTVAGVVTNWTLVTQAHGTQCAMD---PNVIELAGYK 217 (326)
T ss_dssp --HHHHHTST---TEEEETTEEEEEEEEES------SCSSSSCEEEEEEEEEHHHHTCTTSSSCCC---CEEEEESCBC
T ss_pred --hhhccccc---cceeecccccceeeccC------CcccCCCEEEEEccCceeeehhhhhhhccC---cEEEEeeccc
Confidence 34555566 76666655433332222 234678999999999999999988777654 4888876543
No 104
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.13 E-value=1.2e-10 Score=118.18 Aligned_cols=129 Identities=21% Similarity=0.218 Sum_probs=84.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccc-------------------ccc------cccceeecCCc--
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGA-------------------WIK------TVETTMLQTPK-- 55 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~-------------------w~~------~~~~~~~~~~~-- 55 (522)
+++|+|||||++|+++|..|++.|++|+|||+.+.++.. |.. ......+..+.
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~g 102 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRSG 102 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCCC
Confidence 579999999999999999999999999999998765311 000 00111111110
Q ss_pred -cceeecCCCCC--CCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCC
Q 009917 56 -QLYQFSDYPWP--DSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRG 132 (522)
Q Consensus 56 -~~~~~~~~~~~--~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (522)
....+...... .........+..+.++|.+.+.+ . .++++++|++++..+ +
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~----------------------~ 156 (407)
T 3rp8_A 103 ENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--D--SVQFGKRVTRCEEDA----------------------D 156 (407)
T ss_dssp CEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--G--GEEESCCEEEEEEET----------------------T
T ss_pred CEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--C--EEEECCEEEEEEecC----------------------C
Confidence 01111110000 00012223567788888888776 3 799999999999865 4
Q ss_pred cEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 133 KWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 133 ~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
.+.|++.++ +++.+|.||.|+|..|
T Consensus 157 ~v~v~~~~g-----~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 157 GVTVWFTDG-----SSASGDLLIAADGSHS 181 (407)
T ss_dssp EEEEEETTS-----CEEEESEEEECCCTTC
T ss_pred cEEEEEcCC-----CEEeeCEEEECCCcCh
Confidence 588888776 4799999999999875
No 105
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.11 E-value=3.9e-10 Score=113.92 Aligned_cols=130 Identities=24% Similarity=0.309 Sum_probs=82.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCc-----cccccccc-cce---------------------eecCC
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI-----GGAWIKTV-ETT---------------------MLQTP 54 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~-----Gg~w~~~~-~~~---------------------~~~~~ 54 (522)
..++|+|||||++|+++|..|++.|++|+|||+++.+ |+.|.... .+. .+..+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 3579999999999999999999999999999998753 33332110 000 00000
Q ss_pred ccceeecCC-CCCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCc
Q 009917 55 KQLYQFSDY-PWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGK 133 (522)
Q Consensus 55 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (522)
.....+... +...........+..+.++|.+.+.. . .++++++|++++..+ +.
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~----------------------~~ 158 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--D--TVIWDRKLVMLEPGK----------------------KK 158 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--T--SEEESCCEEEEEECS----------------------SS
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--C--EEEECCEEEEEEECC----------------------CE
Confidence 000000000 10000011123556676777665432 2 689999999998764 45
Q ss_pred EEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 134 WTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 134 ~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
|.|++.++ .++.+|.||.|+|..|
T Consensus 159 v~v~~~~g-----~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 159 WTLTFENK-----PSETADLVILANGGMS 182 (398)
T ss_dssp EEEEETTS-----CCEEESEEEECSCTTC
T ss_pred EEEEECCC-----cEEecCEEEECCCcch
Confidence 88888765 4689999999999875
No 106
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.10 E-value=6.6e-10 Score=117.37 Aligned_cols=137 Identities=15% Similarity=0.148 Sum_probs=90.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccc------------------cccc----cc---cceeecC--
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG------------------AWIK----TV---ETTMLQT-- 53 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg------------------~w~~----~~---~~~~~~~-- 53 (522)
|..+||+|||||++|+++|..|++.|++|+|+|+.+..+. .|.. .+ .+.....
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecC
Confidence 5568999999999999999999999999999999853321 1110 00 0000000
Q ss_pred Ccc--ceeecCCCCCC-CC-CCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCC
Q 009917 54 PKQ--LYQFSDYPWPD-SV-TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFG 129 (522)
Q Consensus 54 ~~~--~~~~~~~~~~~-~~-~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~ 129 (522)
... .+.|....... .. .........+.++|.+.+.+.|+ .++++++|+++...+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~V~~v~~~~-------------------- 158 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGI--TVHEETPVTDVDLSD-------------------- 158 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEECCS--------------------
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEcC--------------------
Confidence 000 11111110000 00 11124667888999999988888 899999999998753
Q ss_pred CCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 130 SRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 130 ~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
++.+.|++.++ |+..++.+|.||.|+|..|
T Consensus 159 -g~~~~V~~~~~--G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 159 -PDRVVLTVRRG--GESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp -TTCEEEEEEET--TEEEEEEESEEEECCGGGC
T ss_pred -CCEEEEEEecC--CceEEEEcCEEEECCCCcc
Confidence 24588888752 4556899999999999874
No 107
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.10 E-value=2.9e-10 Score=115.35 Aligned_cols=137 Identities=16% Similarity=0.144 Sum_probs=86.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCc-eEEEecCCCccccccc--cccc---------e----e-ecCCccceeecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFH-PIVFEARSDIGGAWIK--TVET---------T----M-LQTPKQLYQFSDY 63 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~-v~i~e~~~~~Gg~w~~--~~~~---------~----~-~~~~~~~~~~~~~ 63 (522)
|.+++|+|||||++|+++|..|++.|++ |+|||+.+.++..... ..+. + . ...+...+.+.+.
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~ 81 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQ 81 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcC
Confidence 4568999999999999999999999999 9999998765432111 0000 0 0 0000011111110
Q ss_pred --------CC----CCCCCCCCCChhHHHHHHHHHHHh-cC-CccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCC
Q 009917 64 --------PW----PDSVTTDFPDHNQVLDYIQSYASH-FD-LRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFG 129 (522)
Q Consensus 64 --------~~----~~~~~~~~~~~~~~~~yl~~~~~~-~~-l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~ 129 (522)
+. ..........+.++.++|.+.+.+ .+ + .++++++|++++. +
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~--~v~~~~~v~~i~~-~-------------------- 138 (410)
T 3c96_A 82 SGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQ--AVRTGLGVERIEE-R-------------------- 138 (410)
T ss_dssp TSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTT--SEEESEEEEEEEE-E--------------------
T ss_pred CCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCc--EEEECCEEEEEec-C--------------------
Confidence 00 000001123556788888887765 34 3 6999999999987 5
Q ss_pred CCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 130 SRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 130 ~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+.+.|++.+..+|+..++.+|.||.|+|..|
T Consensus 139 --~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 139 --DGRVLIGARDGHGKPQALGADVLVGADGIHS 169 (410)
T ss_dssp --TTEEEEEEEETTSCEEEEEESEEEECCCTTC
T ss_pred --CccEEEEecCCCCCceEEecCEEEECCCccc
Confidence 2478888763224446799999999999875
No 108
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.10 E-value=2.5e-10 Score=118.91 Aligned_cols=131 Identities=21% Similarity=0.341 Sum_probs=84.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcc-------ccccc--cccceeecCCc-cceeec------------
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG-------GAWIK--TVETTMLQTPK-QLYQFS------------ 61 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~G-------g~w~~--~~~~~~~~~~~-~~~~~~------------ 61 (522)
+||+|||||++|+++|..|++.|++|+|||+.+.++ +.|.. +.+...+.... ..-.|+
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~~ 187 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN 187 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecccc
Confidence 689999999999999999999999999999998763 33433 11100000000 000000
Q ss_pred -----------CCCCCCCC---CCCCC---ChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCC
Q 009917 62 -----------DYPWPDSV---TTDFP---DHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGN 124 (522)
Q Consensus 62 -----------~~~~~~~~---~~~~~---~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~ 124 (522)
.+..+... ...+. ....+.+.+.+.+++.++ .++++++|+++...+
T Consensus 188 ~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv--~I~~~t~V~~I~~~~--------------- 250 (549)
T 3nlc_A 188 FYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGG--EIRFSTRVDDLHMED--------------- 250 (549)
T ss_dssp CHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTC--EEESSCCEEEEEESS---------------
T ss_pred ccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEEeC---------------
Confidence 00000000 00011 125677788888888888 899999999998764
Q ss_pred CCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 125 GQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 125 ~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+..+.|++.++ +++.||.||+|+|..+
T Consensus 251 ------~~v~gV~l~~G-----~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 251 ------GQITGVTLSNG-----EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp ------SBEEEEEETTS-----CEEECSCEEECCCTTC
T ss_pred ------CEEEEEEECCC-----CEEECCEEEECCCCCh
Confidence 23356777765 5799999999999863
No 109
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.09 E-value=1.2e-10 Score=120.86 Aligned_cols=136 Identities=18% Similarity=0.182 Sum_probs=88.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc-cccceeec-CCcccee-ecCCCCCCCCCCCCCChhHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTMLQ-TPKQLYQ-FSDYPWPDSVTTDFPDHNQV 79 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~-~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (522)
.++|+|||||++|+++|..|++.|++|+|||+++.+|+.... ..+...-. ....... ...+... .....+..++
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~l 168 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTG---TLDHISIRQL 168 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCT---TCCEEEHHHH
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccccccc---ccccCCHHHH
Confidence 479999999999999999999999999999999887753211 11100000 0000000 0001100 1112345788
Q ss_pred HHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeec
Q 009917 80 LDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVG 159 (522)
Q Consensus 80 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG 159 (522)
.++|.+.+++.++ .++++++|++++..+. +.+.|.|++.+..+|+..++.+|+||+|+|
T Consensus 169 ~~~L~~~~~~~gv--~v~~~~~v~~i~~~~~-------------------~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G 227 (497)
T 2bry_A 169 QLLLLKVALLLGV--EIHWGVKFTGLQPPPR-------------------KGSGWRAQLQPNPPAQLASYEFDVLISAAG 227 (497)
T ss_dssp HHHHHHHHHHTTC--EEEESCEEEEEECCCS-------------------TTCCBEEEEESCCCHHHHTCCBSEEEECCC
T ss_pred HHHHHHHHHhCCC--EEEeCCEEEEEEEecC-------------------CCCEEEEEEEECCCCCEEEEEcCEEEECCC
Confidence 8999999988888 8999999999987420 023588888542124334689999999999
Q ss_pred ccC
Q 009917 160 RFS 162 (522)
Q Consensus 160 ~~s 162 (522)
..|
T Consensus 228 ~~S 230 (497)
T 2bry_A 228 GKF 230 (497)
T ss_dssp TTC
T ss_pred CCc
Confidence 774
No 110
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.09 E-value=2.1e-10 Score=115.13 Aligned_cols=129 Identities=16% Similarity=0.196 Sum_probs=84.3
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--ccc---------ce----e-ecCCccceeecC--
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVE---------TT----M-LQTPKQLYQFSD-- 62 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~~~---------~~----~-~~~~~~~~~~~~-- 62 (522)
|..++|+|||||++|+++|..|++.|++|+|||+.+.+++.-.. ..+ ++ . ...+...+.+.+
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 88 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHN 88 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCC
Confidence 44579999999999999999999999999999998776431000 000 00 0 000001011110
Q ss_pred -----CCCCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEE
Q 009917 63 -----YPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (522)
Q Consensus 63 -----~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (522)
++.+ ........+.++.++|.+.+.+.++ .++++++|++++. + + .|+
T Consensus 89 ~~~~~~~~~-~~~~~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~-~----------------------~--~v~ 140 (379)
T 3alj_A 89 KSVSKETFN-GLPWRIMTRSHLHDALVNRARALGV--DISVNSEAVAADP-V----------------------G--RLT 140 (379)
T ss_dssp EEEEEECGG-GCCEEEEEHHHHHHHHHHHHHHTTC--EEESSCCEEEEET-T----------------------T--EEE
T ss_pred ceeeeccCC-CCceEEECHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEe-C----------------------C--EEE
Confidence 1110 0011233567888999999888888 8999999999975 3 3 677
Q ss_pred EecCCCCceeEEEeCEEEEeecccC
Q 009917 138 VEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 138 ~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+.++ +++.+|.||.|+|..|
T Consensus 141 ~~~g-----~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 141 LQTG-----EVLEADLIVGADGVGS 160 (379)
T ss_dssp ETTS-----CEEECSEEEECCCTTC
T ss_pred ECCC-----CEEEcCEEEECCCccH
Confidence 7665 4799999999999764
No 111
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.08 E-value=3.2e-10 Score=114.58 Aligned_cols=130 Identities=15% Similarity=0.135 Sum_probs=85.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcc---cc----------------ccc------cccceeecCCc--c
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG---GA----------------WIK------TVETTMLQTPK--Q 56 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~G---g~----------------w~~------~~~~~~~~~~~--~ 56 (522)
+||+|||||++|+++|..|++.|++|+|||+++.+. .. |.. ......+..+. .
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 689999999999999999999999999999987541 00 000 00000000000 0
Q ss_pred ceeecCCCCCCCCCCCCCChhHHHHHHHHHHHhc-CCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcE-
Q 009917 57 LYQFSDYPWPDSVTTDFPDHNQVLDYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKW- 134 (522)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 134 (522)
...+...............+..+.+.|.+.+++. ++ .++++++|++++.++ +.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv--~i~~~~~v~~i~~~~----------------------~~v~ 142 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATV--EMLFETRIEAVQRDE----------------------RHAI 142 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTE--EEECSCCEEEEEECT----------------------TSCE
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCc--EEEcCCEEEEEEEcC----------------------CceE
Confidence 1111110000000112346778889999988887 77 899999999998764 347
Q ss_pred -EEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 135 -TVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 135 -~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
.|++.++ +++.+|.||.|+|..|
T Consensus 143 g~v~~~~g-----~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 143 DQVRLNDG-----RVLRPRVVVGADGIAS 166 (399)
T ss_dssp EEEEETTS-----CEEEEEEEEECCCTTC
T ss_pred EEEEECCC-----CEEECCEEEECCCCCh
Confidence 7877665 4789999999999874
No 112
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.07 E-value=6.1e-10 Score=112.45 Aligned_cols=130 Identities=18% Similarity=0.222 Sum_probs=82.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCc----cccc-cc-----ccc--ce---eecCCccceeecCC-C-
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI----GGAW-IK-----TVE--TT---MLQTPKQLYQFSDY-P- 64 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~----Gg~w-~~-----~~~--~~---~~~~~~~~~~~~~~-~- 64 (522)
.+++|+|||||++|+++|..|++.|++|+|||+.+.. |+.+ .. ... ++ ....+...+.+.+. .
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCC
Confidence 4579999999999999999999999999999998653 2111 10 000 00 00111111111110 0
Q ss_pred --CCC-CCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecC
Q 009917 65 --WPD-SVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA 141 (522)
Q Consensus 65 --~~~-~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 141 (522)
... ...........+.++|.+.+ -++ .++++++|++++..+ +.|.|++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~--~i~~~~~v~~i~~~~----------------------~~v~v~~~~g 137 (397)
T 2vou_A 84 ERVGSVPADWRFTSYDSIYGGLYELF--GPE--RYHTSKCLVGLSQDS----------------------ETVQMRFSDG 137 (397)
T ss_dssp CEEEEEECCCCEEEHHHHHHHHHHHH--CST--TEETTCCEEEEEECS----------------------SCEEEEETTS
T ss_pred CccccccCcccccCHHHHHHHHHHhC--CCc--EEEcCCEEEEEEecC----------------------CEEEEEECCC
Confidence 000 00011233456667776654 245 799999999998764 4588888765
Q ss_pred CCCceeEEEeCEEEEeecccC
Q 009917 142 KNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 142 ~~g~~~~~~~d~lvvAtG~~s 162 (522)
+++.+|.||.|+|..|
T Consensus 138 -----~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 138 -----TKAEANWVIGADGGAS 153 (397)
T ss_dssp -----CEEEESEEEECCCTTC
T ss_pred -----CEEECCEEEECCCcch
Confidence 4799999999999875
No 113
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.07 E-value=9.9e-10 Score=115.63 Aligned_cols=132 Identities=11% Similarity=0.117 Sum_probs=86.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc--c---------------------ccc------eeecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--T---------------------VET------TMLQTP 54 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~--~---------------------~~~------~~~~~~ 54 (522)
.+|+|||||++|+++|..|++.|++|+|||+.+.++..... . .+. ..+...
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 58999999999999999999999999999998766432111 0 000 001100
Q ss_pred c--cceeecCCCC-------CCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCC
Q 009917 55 K--QLYQFSDYPW-------PDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNG 125 (522)
Q Consensus 55 ~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~ 125 (522)
. .+..+..... .........+...+.++|.+.+.+. ++++++|++++.++
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~---------------- 165 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRD---------------- 165 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECS----------------
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeC----------------
Confidence 0 0111111000 0000112235667888888887765 89999999998764
Q ss_pred CCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 126 QPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 126 ~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+.++|++.+..+|+..++.+|+||.|+|..|
T Consensus 166 ------~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 166 ------DHVRATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp ------SCEEEEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred ------CEEEEEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 4588888774445556899999999999885
No 114
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.07 E-value=1e-09 Score=105.37 Aligned_cols=136 Identities=15% Similarity=0.210 Sum_probs=82.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhc-CCceEEEecCCCcccc-ccc--cccceeecCCcc-ceeecCCCCCCCCCCCC--CC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARSDIGGA-WIK--TVETTMLQTPKQ-LYQFSDYPWPDSVTTDF--PD 75 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~-g~~v~i~e~~~~~Gg~-w~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~ 75 (522)
.+||+|||||++|+++|..|++. |.+|+|+|+++.+||. |.. ......+..+.. .+.-...++... ...+ ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~-~~~~~~~~ 117 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQ-DTYVVVKH 117 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEEC-SSEEEESC
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccC-CCEEEecC
Confidence 46899999999999999999997 9999999999888763 332 111111111100 000001122110 0011 13
Q ss_pred hhHHHHHHHHHHHh-cCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEe---------cCCCCc
Q 009917 76 HNQVLDYIQSYASH-FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVE---------DAKNHS 145 (522)
Q Consensus 76 ~~~~~~yl~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---------~~~~g~ 145 (522)
..++...+.+.+.+ .++ .++++++|+++..++ +....|.+. ++..++
T Consensus 118 ~~~~~~~l~~~~~~~~gv--~i~~~~~V~~i~~~~---------------------~~v~gv~~~~~~~~~~~~~g~~g~ 174 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKG---------------------NRVGGVVTNWALVAQNHHTQSCMD 174 (284)
T ss_dssp HHHHHHHHHHHHHTSTTE--EEEETEEEEEEEEET---------------------TEEEEEEEEEHHHHTCTTTSSCCC
T ss_pred HHHHHHHHHHHHHhcCCC--EEEcCcEEEEEEecC---------------------CeEEEEEEeccccccccCccccCc
Confidence 45666666655544 577 788999999998754 111234443 111234
Q ss_pred eeEEEeCEEEEeecccC
Q 009917 146 TEVHQVDFVILCVGRFS 162 (522)
Q Consensus 146 ~~~~~~d~lvvAtG~~s 162 (522)
..++.+|.||+|+|..+
T Consensus 175 ~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 175 PNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp CEEEEEEEEEECCCSSS
T ss_pred eEEEECCEEEECCCCch
Confidence 46799999999999653
No 115
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.07 E-value=1.1e-09 Score=114.97 Aligned_cols=136 Identities=15% Similarity=0.234 Sum_probs=90.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccc-------------------ccc-cccce-----------ee
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGA-------------------WIK-TVETT-----------ML 51 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~-------------------w~~-~~~~~-----------~~ 51 (522)
+++|+|||||++||++|..|.+.|++|+|||+.+.++.. |.. .-.+. .+
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 479999999999999999999999999999998765311 100 00000 00
Q ss_pred cCCc--cce----eecC----CC--CCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCccccccc
Q 009917 52 QTPK--QLY----QFSD----YP--WPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWS 119 (522)
Q Consensus 52 ~~~~--~~~----~~~~----~~--~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~ 119 (522)
.... .+. .+.. .. .+. .....+...+.++|.+.+.+.++ .++++++|++++.++ +.
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~~~--~~------ 152 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPA--GWAMLSQDKLEPILLAQARKHGG--AIRFGTRLLSFRQHD--DD------ 152 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSC--CCBCCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEEEC--GG------
T ss_pred eccCCceeeeccccccccccccccCCCC--cccccCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEECC--CC------
Confidence 0000 000 0000 00 010 12345678899999999998888 899999999999865 00
Q ss_pred ccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 120 FWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 120 ~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
....+++++.+++ + ..++.+|+||.|+|..|
T Consensus 153 ----------~~~~v~v~~~~~~-~-~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 153 ----------AGAGVTARLAGPD-G-EYDLRAGYLVGADGNRS 183 (535)
T ss_dssp ----------GCSEEEEEEEETT-E-EEEEEEEEEEECCCTTC
T ss_pred ----------ccccEEEEEEcCC-C-eEEEEeCEEEECCCCcc
Confidence 0015888887763 2 56899999999999875
No 116
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.06 E-value=9.8e-10 Score=114.13 Aligned_cols=134 Identities=19% Similarity=0.201 Sum_probs=89.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc---------------cccceeecCCccceeecCCC---
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK---------------TVETTMLQTPKQLYQFSDYP--- 64 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~---------------~~~~~~~~~~~~~~~~~~~~--- 64 (522)
.++|+|||||++||++|..|++.|++|+|||+.+.++..-.. ..+.+.-..+.....|....
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 368999999999999999999999999999998765421110 00000000011111111100
Q ss_pred --CCCCC-CCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecC
Q 009917 65 --WPDSV-TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA 141 (522)
Q Consensus 65 --~~~~~-~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 141 (522)
..... .....+...+.+.|.+.+.+.++ .++++++|++++.++ +.++|++.++
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~~----------------------~~v~v~~~~~ 147 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGA--ELLRGHTVRALTDEG----------------------DHVVVEVEGP 147 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTC--EEEESCEEEEEEECS----------------------SCEEEEEECS
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEeC----------------------CEEEEEEEcC
Confidence 00000 01223567888999999988887 899999999998864 3588888776
Q ss_pred CCCceeEEEeCEEEEeecccC
Q 009917 142 KNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 142 ~~g~~~~~~~d~lvvAtG~~s 162 (522)
. | .+++++|+||.|.|..|
T Consensus 148 ~-g-~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 148 D-G-PRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp S-C-EEEEEEEEEEECCCTTC
T ss_pred C-C-cEEEEeCEEEEccCccc
Confidence 3 4 45799999999999885
No 117
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.06 E-value=9.2e-10 Score=116.01 Aligned_cols=132 Identities=16% Similarity=0.148 Sum_probs=87.3
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccc-------------------cccccc-cceeec---CCcc---c
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG-------------------AWIKTV-ETTMLQ---TPKQ---L 57 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg-------------------~w~~~~-~~~~~~---~~~~---~ 57 (522)
+||+|||||++|+++|..|++.|++|+|||+.+.... .|.... .+.... .... .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 6899999999999999999999999999999876541 111100 000000 0000 1
Q ss_pred eeecCCCCCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEE
Q 009917 58 YQFSDYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (522)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (522)
+.+...+.+.. .........+.+.|.+.+++.++ .++++++|++++.++ +.+.|+
T Consensus 130 ~~~~~~~~~~~-~~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~l~~~~----------------------~~v~v~ 184 (570)
T 3fmw_A 130 LDFGLVDTRHP-YTGLVPQSRTEALLAEHAREAGA--EIPRGHEVTRLRQDA----------------------EAVEVT 184 (570)
T ss_dssp CBGGGSCCSCC-SBBCCCHHHHHHHHHHHHHHHTE--ECCBSCEEEECCBCS----------------------SCEEEE
T ss_pred ccccccCCCCC-eeEEeCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEcC----------------------CeEEEE
Confidence 11111111100 12235678888999999888887 889999999998754 457888
Q ss_pred EecCCCCceeEEEeCEEEEeecccC
Q 009917 138 VEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 138 ~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+.+.+ | .+++++|+||.|+|..|
T Consensus 185 ~~~~~-G-~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 185 VAGPS-G-PYPVRARYGVGCDGGRS 207 (570)
T ss_dssp EEETT-E-EEEEEESEEEECSCSSC
T ss_pred EEeCC-C-cEEEEeCEEEEcCCCCc
Confidence 75421 2 25799999999999875
No 118
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.05 E-value=1.6e-10 Score=121.33 Aligned_cols=168 Identities=16% Similarity=0.122 Sum_probs=98.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC-CccccccccccceeecC-----------Cc--------cceeecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS-DIGGAWIKTVETTMLQT-----------PK--------QLYQFSD 62 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~-~~Gg~w~~~~~~~~~~~-----------~~--------~~~~~~~ 62 (522)
.+||+|||||++|++||..|++.|.+|+|+|++. .+|... +.|...... .. ....|..
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~--Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMS--CNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI 105 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS--SSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccccc--ccccccchhhHHHHHHHHHhccHHHHHhhhcccchhh
Confidence 4799999999999999999999999999999974 343211 111111000 00 0011110
Q ss_pred CCC---CCCC-CCCCCChhHHHHHHHHHHHh-cCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEE
Q 009917 63 YPW---PDSV-TTDFPDHNQVLDYIQSYASH-FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (522)
Q Consensus 63 ~~~---~~~~-~~~~~~~~~~~~yl~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (522)
... +..+ .........+.+.+.+.+++ .++ .+ ++++|+.+..++ +..+.|.
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV--~I-~~~~V~~L~~e~---------------------g~V~GV~ 161 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNL--MI-FQQAVEDLIVEN---------------------DRVVGAV 161 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEESS---------------------SBEEEEE
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCC--EE-EEEEEEEEEecC---------------------CEEEEEE
Confidence 000 0000 00012345677888888877 477 56 788999998754 1234566
Q ss_pred EecCCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHH
Q 009917 138 VEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (522)
Q Consensus 138 ~~~~~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~d 217 (522)
+.++ .++.||.||+|||.++ ..+.++ |...+ .+.+ +| |.+|++
T Consensus 162 t~dG-----~~I~Ad~VVLATGt~s---~~~~i~---G~~~~----------------------~~gr---iG-g~~a~e 204 (651)
T 3ces_A 162 TQMG-----LKFRAKAVVLTVGTFL---DGKIHI---GLDNY----------------------SGGR---AG-DPPSIP 204 (651)
T ss_dssp ETTS-----EEEEEEEEEECCSTTT---CCEEEC---C---------------------------------------CCH
T ss_pred ECCC-----CEEECCEEEEcCCCCc---cCcccc---CcccC----------------------CCCC---cc-chhhhH
Confidence 6554 5799999999999663 444455 54432 1222 56 788999
Q ss_pred HHHHHhhhcCCCCceEEEE
Q 009917 218 IAMECTTANGLENPCTVLY 236 (522)
Q Consensus 218 ia~~l~~~~~~~~~Vt~v~ 236 (522)
++..|.+.+.. |+.+.
T Consensus 205 LA~~L~~lG~~---v~~~~ 220 (651)
T 3ces_A 205 LSRRLRELPLR---VGRLK 220 (651)
T ss_dssp HHHHHHTTTCC---EEEEC
T ss_pred HHHHHHhcCCe---EEEec
Confidence 99999887654 88775
No 119
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.05 E-value=1.1e-09 Score=113.75 Aligned_cols=134 Identities=17% Similarity=0.253 Sum_probs=89.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccccc------c---------cccceeecCCccceeecCCC---
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWI------K---------TVETTMLQTPKQLYQFSDYP--- 64 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~------~---------~~~~~~~~~~~~~~~~~~~~--- 64 (522)
+++|+|||||++||++|..|++.|++|+|||+.+.++..-. . ..+.+.-..+.....|....
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 90 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDF 90 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceeccc
Confidence 47999999999999999999999999999999876542110 0 00110000111111121100
Q ss_pred --CCCCC-CCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecC
Q 009917 65 --WPDSV-TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA 141 (522)
Q Consensus 65 --~~~~~-~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 141 (522)
..... .....+...+.+.|.+.+.+.++ .++++++|++++.++ +.++|++.++
T Consensus 91 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~~----------------------~~v~v~~~~~ 146 (500)
T 2qa1_A 91 GVLEGAWQAAKTVPQSVTETHLEQWATGLGA--DIRRGHEVLSLTDDG----------------------AGVTVEVRGP 146 (500)
T ss_dssp GGSTTGGGCEEEEEHHHHHHHHHHHHHHTTC--EEEETCEEEEEEEET----------------------TEEEEEEEET
T ss_pred ccCCCCCCceeecCHHHHHHHHHHHHHHCCC--EEECCcEEEEEEEcC----------------------CeEEEEEEcC
Confidence 00000 01223567888999999988887 899999999998865 3578888775
Q ss_pred CCCceeEEEeCEEEEeecccC
Q 009917 142 KNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 142 ~~g~~~~~~~d~lvvAtG~~s 162 (522)
. | .+++++|+||.|.|..|
T Consensus 147 ~-g-~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 147 E-G-KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp T-E-EEEEEESEEEECCCTTC
T ss_pred C-C-CEEEEeCEEEECCCcch
Confidence 3 3 45799999999999885
No 120
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.05 E-value=3.2e-10 Score=114.38 Aligned_cols=133 Identities=17% Similarity=0.131 Sum_probs=83.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCc------c--ccccc---------c----------ccceeecCCcc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI------G--GAWIK---------T----------VETTMLQTPKQ 56 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~------G--g~w~~---------~----------~~~~~~~~~~~ 56 (522)
++|+|||||++|+++|..|++.|++|+|||+.+.. + ..+.. . ..+..+.....
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 79999999999999999999999999999998642 1 11111 0 00000000000
Q ss_pred ceeecCCCCCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEE
Q 009917 57 LYQFSDYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTV 136 (522)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 136 (522)
...+..............+..++.+.|.+.+.+.++ .++++++|++++..+ ++.+.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~--~i~~~~~v~~i~~~~---------------------~~~~~v 139 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGA--TTVYQAAEVRLHDLQ---------------------GERPYV 139 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTC--EEESSCEEEEEECTT---------------------SSSCEE
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCC--eEEeceeEEEEEEec---------------------CCceEE
Confidence 000000000000011122456777888887777777 899999999998653 234778
Q ss_pred EE-ecCCCCceeEEEeCEEEEeecccC
Q 009917 137 AV-EDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 137 ~~-~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
++ .+ |+..++.+|.||.|+|..|
T Consensus 140 ~~~~~---g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 140 TFERD---GERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp EEEET---TEEEEEECSEEEECCCTTC
T ss_pred EEecC---CcEEEEEeCEEEECCCCCc
Confidence 87 44 4334799999999999875
No 121
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.04 E-value=1.1e-09 Score=114.26 Aligned_cols=135 Identities=15% Similarity=0.272 Sum_probs=86.7
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC----Cccccccc-cc------ccee--e---cCCc-c----------
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS----DIGGAWIK-TV------ETTM--L---QTPK-Q---------- 56 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~----~~Gg~w~~-~~------~~~~--~---~~~~-~---------- 56 (522)
+||+|||||++|+++|..|++.|++|+|||+.+ .+|..... .. -++. + ..+. .
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 699999999999999999999999999999987 33332211 00 0000 0 0000 0
Q ss_pred ---ceeecCCCCCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCc
Q 009917 57 ---LYQFSDYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGK 133 (522)
Q Consensus 57 ---~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (522)
.+.|...+...........+..+.++|.+.+.+.++ .++++++|+++...+ +..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~~~~V~~v~~~~---------------------~~v 144 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGV--DVRERHEVIDVLFEG---------------------ERA 144 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEEET---------------------TEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEEC---------------------CEE
Confidence 011111111100011224677888999999988888 899999999999864 111
Q ss_pred EEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 134 WTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 134 ~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
..|++.+. +|+..++.+|.||.|+|..|
T Consensus 145 ~gv~~~~~-dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 145 VGVRYRNT-EGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp EEEEEECS-SSCEEEEEEEEEEECCCTTC
T ss_pred EEEEEEeC-CCCEEEEEcCEEEECCCcch
Confidence 23555543 24456899999999999874
No 122
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.03 E-value=3.1e-10 Score=101.10 Aligned_cols=93 Identities=10% Similarity=0.013 Sum_probs=56.5
Q ss_pred cEEEeecCceeEecC--c--EEEcCCCceecccEEEEecCCCCCcccccccccccccccccCCCCCCcccceeecCCCCC
Q 009917 338 SIILKKSQDFSFCED--G--IVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYREIIHPQIP 413 (522)
Q Consensus 338 ~v~v~~~~i~~~~~~--g--v~~~dG~~~~~~D~VI~aTG~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ly~~~~~~~~p 413 (522)
+|+++.+.+.+++.+ + |.+++| + +++|.||+|||.+++. .+.+..+. . .+.+.. ...+.++.|
T Consensus 70 gv~v~~~~v~~i~~~~~~~~v~~~~g-~-i~ad~vI~A~G~~~~~--~~~~g~~~-------~-~g~i~v-d~~~~t~~~ 136 (180)
T 2ywl_A 70 GAEVRPGVVKGVRDMGGVFEVETEEG-V-EKAERLLLCTHKDPTL--PSLLGLTR-------R-GAYIDT-DEGGRTSYP 136 (180)
T ss_dssp TCEEEECCCCEEEECSSSEEEECSSC-E-EEEEEEEECCTTCCHH--HHHHTCCE-------E-TTEECC-CTTCBCSST
T ss_pred CCEEEeCEEEEEEEcCCEEEEEECCC-E-EEECEEEECCCCCCCc--cccCCCCc-------c-CceEEe-CCCCCcCCC
Confidence 455555566666542 2 566777 6 9999999999999742 11111110 1 111111 112345789
Q ss_pred ceEEEcccCCcc--hhhhHHHHHHHHHHHHcC
Q 009917 414 QLAIIGFSESIS--NLYTSEMRCRWLAELLDG 443 (522)
Q Consensus 414 nl~~iG~~~~~~--~~~~~e~qa~~ia~~l~g 443 (522)
++|++|.+.... ....+..|++.+|..+.+
T Consensus 137 ~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 137 RVYAAGVARGKVPGHAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp TEEECGGGGTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEeecccCcchhhHHHHHHhHHHHHHHHHH
Confidence 999999665432 456778888888887654
No 123
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.00 E-value=4.5e-10 Score=115.21 Aligned_cols=131 Identities=22% Similarity=0.360 Sum_probs=86.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccccccc------ccce------eecC---Cccce----eec---
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKT------VETT------MLQT---PKQLY----QFS--- 61 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~------~~~~------~~~~---~~~~~----~~~--- 61 (522)
+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+..... +... .-.. +.... .|.
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 699999999999999999999999999999998777532210 0000 0000 00000 000
Q ss_pred --------CCCCCCC-CCCCCC---ChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCC
Q 009917 62 --------DYPWPDS-VTTDFP---DHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFG 129 (522)
Q Consensus 62 --------~~~~~~~-~~~~~~---~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~ 129 (522)
..++... ....|+ ....+.+.|.+.+++.++ .++++++|+++..++
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV--~i~~~~~V~~i~~~~-------------------- 164 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGV--KIRTNTPVETIEYEN-------------------- 164 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTC--EEECSCCEEEEEEET--------------------
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCC--EEEeCcEEEEEEecC--------------------
Confidence 0011000 011122 357788888888888888 899999999998754
Q ss_pred CCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 130 SRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 130 ~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+..|.|++.++ +++.+|.||+|+|..+
T Consensus 165 -~~v~~V~~~~G-----~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 165 -GQTKAVILQTG-----EVLETNHVVIAVGGKS 191 (447)
T ss_dssp -TEEEEEEETTC-----CEEECSCEEECCCCSS
T ss_pred -CcEEEEEECCC-----CEEECCEEEECCCCCc
Confidence 12277877654 3689999999999874
No 124
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.99 E-value=3.9e-09 Score=111.73 Aligned_cols=136 Identities=18% Similarity=0.194 Sum_probs=87.4
Q ss_pred CcEEEECCChhHHHHHHHHHhc------CCceEEEecCCCccccccc---cc--------cc-----eee----------
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK------GFHPIVFEARSDIGGAWIK---TV--------ET-----TML---------- 51 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~------g~~v~i~e~~~~~Gg~w~~---~~--------~~-----~~~---------- 51 (522)
+||+|||||++||++|..|++. |++|+|||+.+.+|+.... .. +. ..+
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 6899999999999999999998 9999999999877754211 00 00 000
Q ss_pred -cCCccceeecCCCC--CCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCC
Q 009917 52 -QTPKQLYQFSDYPW--PDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPF 128 (522)
Q Consensus 52 -~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~ 128 (522)
........+...|. .........+..++.++|.+.+++.++ .++++++|+++..++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~v~~l~~~~------------------- 174 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGV--EVYPGYAAAEILFHE------------------- 174 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEEECT-------------------
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCC--EEEcCCEEEEEEEcC-------------------
Confidence 00000111111111 000011224667888999999998888 899999999998764
Q ss_pred CCCCc-EEEEEec---CCCCce-------eEEEeCEEEEeecccC
Q 009917 129 GSRGK-WTVAVED---AKNHST-------EVHQVDFVILCVGRFS 162 (522)
Q Consensus 129 ~~~~~-~~v~~~~---~~~g~~-------~~~~~d~lvvAtG~~s 162 (522)
++. +.|++.+ ..+|+. .++.+|.||+|+|..|
T Consensus 175 --~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 175 --DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp --TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred --CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 122 2365543 012321 4799999999999874
No 125
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.99 E-value=3.3e-09 Score=112.21 Aligned_cols=137 Identities=18% Similarity=0.199 Sum_probs=88.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceee------------cCCccc-------------
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTML------------QTPKQL------------- 57 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~------------~~~~~~------------- 57 (522)
.+||+|||||++||++|..|++.|.+|+|+|+.+.+||.....-.++.. +.+..+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 4799999999999999999999999999999999888754431111100 000000
Q ss_pred -----------------eeecCCCCCC-----C--CCC------CCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEE
Q 009917 58 -----------------YQFSDYPWPD-----S--VTT------DFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEF 107 (522)
Q Consensus 58 -----------------~~~~~~~~~~-----~--~~~------~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~ 107 (522)
+.-...++.. . ... ....+..+.+.|.+.+++.++ .++++++|+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv--~i~~~~~v~~l~~ 283 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNI--DLRMNTRGIEVLK 283 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEeeEeEE
Confidence 0000011100 0 000 012356788899999998888 8999999999987
Q ss_pred cCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 108 EGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
++ +...+-|.+.+. +|+..++.+|.||+|||.++
T Consensus 284 ~~--------------------~g~v~Gv~~~~~-~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 284 DD--------------------KGTVKGILVKGM-YKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp CT--------------------TSCEEEEEEEET-TTEEEEEECSEEEECCCCCT
T ss_pred cC--------------------CCeEEEEEEEeC-CCcEEEEECCeEEEeCCCcc
Confidence 53 011233555542 25556799999999999874
No 126
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.99 E-value=1.4e-09 Score=111.73 Aligned_cols=134 Identities=13% Similarity=0.081 Sum_probs=86.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCc--cccccc------cccceeecCC---------ccceeecCC--
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI--GGAWIK------TVETTMLQTP---------KQLYQFSDY-- 63 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~--Gg~w~~------~~~~~~~~~~---------~~~~~~~~~-- 63 (522)
++||+|||||++|+++|..|++.|++|+|+|+.+.. |..+.. .+..+.+..+ .....+...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 479999999999999999999999999999998753 222211 0000000000 000001000
Q ss_pred ---CCCCCCCCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEE-EEEe
Q 009917 64 ---PWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT-VAVE 139 (522)
Q Consensus 64 ---~~~~~~~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~ 139 (522)
+++. .....++..+.+.|.+.+.+.++ .++++++|+++..++ +... |++.
T Consensus 86 ~~~~~~~--~~~~i~r~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~~~----------------------~~v~gv~~~ 139 (453)
T 3atr_A 86 TVWTVNG--EGFELNAPLYNQRVLKEAQDRGV--EIWDLTTAMKPIFED----------------------GYVKGAVLF 139 (453)
T ss_dssp CEEEEEE--EEEEECHHHHHHHHHHHHHHTTC--EEESSEEEEEEEEET----------------------TEEEEEEEE
T ss_pred eEEeECC--CcEEEcHHHHHHHHHHHHHHcCC--EEEeCcEEEEEEEEC----------------------CEEEEEEEE
Confidence 0000 01123567888899888888888 899999999998754 2233 6665
Q ss_pred cCCCCceeEEEeCEEEEeecccC
Q 009917 140 DAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 140 ~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+..+|+..++.+|.||.|+|..|
T Consensus 140 ~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 140 NRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp ETTTTEEEEEECSEEEECCGGGC
T ss_pred EcCCCceEEEEcCEEEECcCCch
Confidence 42125555899999999999875
No 127
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.97 E-value=5.8e-09 Score=112.69 Aligned_cols=130 Identities=15% Similarity=0.194 Sum_probs=85.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccc--cccc---cccceeecC-------------------------
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG--AWIK---TVETTMLQT------------------------- 53 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg--~w~~---~~~~~~~~~------------------------- 53 (522)
+||+|||||++|+++|..|++.|.+|+|+|+++.+|+ ++.. .++......
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 352 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKF 352 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 6999999999999999999999999999999766652 2222 111110000
Q ss_pred ---Cccceeec---------------CCC-----------------CCCCC------CCCCCChhHHHHHHHHHHHhcCC
Q 009917 54 ---PKQLYQFS---------------DYP-----------------WPDSV------TTDFPDHNQVLDYIQSYASHFDL 92 (522)
Q Consensus 54 ---~~~~~~~~---------------~~~-----------------~~~~~------~~~~~~~~~~~~yl~~~~~~~~l 92 (522)
....+.+. ..+ .+... .........+...+.+.+++.|+
T Consensus 353 ~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~~Gv 432 (676)
T 3ps9_A 353 DHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGL 432 (676)
T ss_dssp CEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHHHTTC
T ss_pred CcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHHhCCC
Confidence 00000000 000 00000 01112335677778888888888
Q ss_pred ccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 93 RKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 93 ~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
.++++++|+++..++ ++|.|++.++ .++.+|.||+|+|..+
T Consensus 433 --~i~~~t~V~~l~~~~----------------------~~v~V~t~~G-----~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 433 --QIYYQYQLQNFSRKD----------------------DCWLLNFAGD-----QQATHSVVVLANGHQI 473 (676)
T ss_dssp --EEEESCCEEEEEEET----------------------TEEEEEETTS-----CEEEESEEEECCGGGG
T ss_pred --EEEeCCeeeEEEEeC----------------------CeEEEEECCC-----CEEECCEEEECCCcch
Confidence 899999999999865 4588877665 3689999999999874
No 128
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.97 E-value=2.2e-09 Score=106.91 Aligned_cols=61 Identities=11% Similarity=0.130 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEE
Q 009917 76 HNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVI 155 (522)
Q Consensus 76 ~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lv 155 (522)
...+.+.+.+.+++.|+ .++++++|++++.++ ++.|.|++.++ +..++.+|.||
T Consensus 149 ~~~~~~~l~~~~~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~g---~~~~~~a~~VV 202 (369)
T 3dme_A 149 SHALMLAYQGDAESDGA--QLVFHTPLIAGRVRP---------------------EGGFELDFGGA---EPMTLSCRVLI 202 (369)
T ss_dssp HHHHHHHHHHHHHHTTC--EEECSCCEEEEEECT---------------------TSSEEEEECTT---SCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCC--EEECCCEEEEEEEcC---------------------CceEEEEECCC---ceeEEEeCEEE
Confidence 45677778888888888 899999999999864 23488877653 33579999999
Q ss_pred EeecccC
Q 009917 156 LCVGRFS 162 (522)
Q Consensus 156 vAtG~~s 162 (522)
+|+|.++
T Consensus 203 ~A~G~~s 209 (369)
T 3dme_A 203 NAAGLHA 209 (369)
T ss_dssp ECCGGGH
T ss_pred ECCCcch
Confidence 9999874
No 129
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.95 E-value=7.1e-10 Score=115.98 Aligned_cols=169 Identities=15% Similarity=0.126 Sum_probs=103.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC-CccccccccccceeecC-----------Cc--------cceeecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS-DIGGAWIKTVETTMLQT-----------PK--------QLYQFSD 62 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~-~~Gg~w~~~~~~~~~~~-----------~~--------~~~~~~~ 62 (522)
.+||+|||||+||++||..|++.|.+|+|+|++. .+|+. .+.|...... .. ....|..
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~--~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~ 104 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQM--SCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKM 104 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC--CSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCc--CccccccccchHHHHHHHHHhhhHHHHHhhhcccceee
Confidence 3799999999999999999999999999999974 44421 0111110000 00 0011110
Q ss_pred CCC---CCCC-CCCCCChhHHHHHHHHHHHhc-CCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEE
Q 009917 63 YPW---PDSV-TTDFPDHNQVLDYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (522)
Q Consensus 63 ~~~---~~~~-~~~~~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (522)
... +..+ .........+.+.+.+.++++ ++ .+ ++++|+++..++ +..+.|.
T Consensus 105 l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GV--eI-~~~~Vt~L~~e~---------------------g~V~GV~ 160 (637)
T 2zxi_A 105 LNTRKGKAVQSPRAQADKKRYREYMKKVCENQENL--YI-KQEEVVDIIVKN---------------------NQVVGVR 160 (637)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EESCEEEEEESS---------------------SBEEEEE
T ss_pred cccccCccccchhhhCCHHHHHHHHHHHHHhCCCC--EE-EEeEEEEEEecC---------------------CEEEEEE
Confidence 000 0000 000123467788888888874 76 56 688999998754 1224466
Q ss_pred EecCCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHHH
Q 009917 138 VEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (522)
Q Consensus 138 ~~~~~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~d 217 (522)
+.++ .++.+|.||+|||.+ ++.+.++ |.+.+. .| + +| +.+|++
T Consensus 161 t~dG-----~~i~AdaVVLATG~~---s~~~~~~---G~~~~~---------------------~G-r---~G-~~~A~~ 203 (637)
T 2zxi_A 161 TNLG-----VEYKTKAVVVTTGTF---LNGVIYI---GDKMIP---------------------GG-R---LG-EPRSEG 203 (637)
T ss_dssp ETTS-----CEEECSEEEECCTTC---BTCEEEE---TTEEEE---------------------CS-B---TT-BCCBCT
T ss_pred ECCC-----cEEEeCEEEEccCCC---ccCceec---cceecC---------------------CC-C---CC-chhHHH
Confidence 6554 579999999999965 3444455 544321 11 2 23 678899
Q ss_pred HHHHHhhhcCCCCceEEEEc
Q 009917 218 IAMECTTANGLENPCTVLYR 237 (522)
Q Consensus 218 ia~~l~~~~~~~~~Vt~v~r 237 (522)
++..|.+.+.. |+.+.+
T Consensus 204 la~~L~~lG~~---v~~l~t 220 (637)
T 2zxi_A 204 LSDFYRRFDFP---LIRFKT 220 (637)
T ss_dssp HHHHHHHTTCC---CEEEEE
T ss_pred HHHHHHhcCCc---eEEecC
Confidence 99999988654 666654
No 130
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.94 E-value=3e-09 Score=106.27 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=33.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~ 38 (522)
.||+|||||++|+++|..|++.|.+|+|+|+.+..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 79999999999999999999999999999998654
No 131
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.92 E-value=7.8e-09 Score=109.24 Aligned_cols=136 Identities=15% Similarity=0.164 Sum_probs=87.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceee------------cCCcc---------------
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTML------------QTPKQ--------------- 56 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~------------~~~~~--------------- 56 (522)
.||+|||||++||++|..|++.|.+|+|||+.+.+||.....-.+... +.+..
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 689999999999999999999999999999998887643321000000 00000
Q ss_pred --------------------ceee------cCCCCCCCC--CCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEc
Q 009917 57 --------------------LYQF------SDYPWPDSV--TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFE 108 (522)
Q Consensus 57 --------------------~~~~------~~~~~~~~~--~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~ 108 (522)
-..| ....++... .....++..+.+.|.+.+++.++ .++++++|+++..+
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~l~~~ 279 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGI--DTRLNSRVVKLVVN 279 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTC--CEECSEEEEEEEEC
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEEC
Confidence 0000 000111000 00112366788889999998898 89999999999875
Q ss_pred CCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 109 GLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+ ++..+-|.+.+. +|+..++.+|.||+|||.++
T Consensus 280 ~--------------------~g~v~Gv~~~~~-~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 280 D--------------------DHSVVGAVVHGK-HTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp T--------------------TSBEEEEEEEET-TTEEEEEEEEEEEECCCCCT
T ss_pred C--------------------CCcEEEEEEEeC-CCcEEEEEcCEEEEecCCcc
Confidence 3 011233555532 25555789999999999874
No 132
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.91 E-value=1.1e-08 Score=104.65 Aligned_cols=38 Identities=24% Similarity=0.334 Sum_probs=34.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC-ceEEEecCCCccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSDIGG 40 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~~~Gg 40 (522)
..||+|||||++|+++|..|++.|. +|+|+|+.+..||
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~ 44 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSA 44 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCC
Confidence 4799999999999999999999999 9999999876654
No 133
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.91 E-value=8e-09 Score=108.75 Aligned_cols=63 Identities=14% Similarity=0.009 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEE
Q 009917 77 NQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVIL 156 (522)
Q Consensus 77 ~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvv 156 (522)
..+...+...+.+.|. .+.++++|+++..++ ++.|.|++.+..+|+..++.+|.||+
T Consensus 170 ~~l~~~L~~~a~~~G~--~i~~~~~V~~l~~~~---------------------g~v~gV~~~d~~tg~~~~i~A~~VV~ 226 (561)
T 3da1_A 170 ARLTLEIMKEAVARGA--VALNYMKVESFIYDQ---------------------GKVVGVVAKDRLTDTTHTIYAKKVVN 226 (561)
T ss_dssp HHHHHHHHHHHHHTTC--EEEESEEEEEEEEET---------------------TEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCC--EEEcCCEEEEEEEcC---------------------CeEEEEEEEEcCCCceEEEECCEEEE
Confidence 4566667777778888 899999999999864 23367888876557667899999999
Q ss_pred eecccC
Q 009917 157 CVGRFS 162 (522)
Q Consensus 157 AtG~~s 162 (522)
|+|.++
T Consensus 227 AaG~~s 232 (561)
T 3da1_A 227 AAGPWV 232 (561)
T ss_dssp CCGGGH
T ss_pred CCCcch
Confidence 999873
No 134
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.90 E-value=1.4e-08 Score=109.82 Aligned_cols=36 Identities=25% Similarity=0.366 Sum_probs=33.7
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG 39 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~G 39 (522)
+||+|||||++|+++|..|++.|.+|+|+|+.+.+|
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g 300 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPA 300 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTT
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccc
Confidence 699999999999999999999999999999986665
No 135
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.90 E-value=4.2e-09 Score=109.61 Aligned_cols=138 Identities=14% Similarity=0.147 Sum_probs=86.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc----cccceeec---------------------CCc
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK----TVETTMLQ---------------------TPK 55 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~----~~~~~~~~---------------------~~~ 55 (522)
|+..||+|||||++|+++|..|++.|++|+|+|+.+-.+|+... ..++.+.. .|.
T Consensus 1 M~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 80 (501)
T 2qcu_A 1 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPH 80 (501)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCCc
Confidence 77789999999999999999999999999999997643332211 11111100 000
Q ss_pred cc------eeec--------------------C------------C--CCCCC-CC------CCCCChhHHHHHHHHHHH
Q 009917 56 QL------YQFS--------------------D------------Y--PWPDS-VT------TDFPDHNQVLDYIQSYAS 88 (522)
Q Consensus 56 ~~------~~~~--------------------~------------~--~~~~~-~~------~~~~~~~~~~~yl~~~~~ 88 (522)
.. +.+. . + |.-.. .. ........+...+.+.+.
T Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~~g~v~~~~l~~~l~~~a~ 160 (501)
T 2qcu_A 81 IAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV 160 (501)
T ss_dssp TEEEEEEEEECCTTTSCHHHHHHHHHHHHSSSCCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHHHHHHHHHHHHH
T ss_pred cccccCeEeccCcccchHHHHHHHHHHHHhcCCcEEECHHHHHHhhcCCCcchhceEEEEeeCCEEcHHHHHHHHHHHHH
Confidence 00 0000 0 0 10000 00 001123456677777778
Q ss_pred hcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 89 HFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 89 ~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+.|. .+.++++|+++..++ +.|.|++.+..+|+..++.+|.||+|+|.++
T Consensus 161 ~~Gv--~i~~~~~V~~l~~~~----------------------~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 161 RKGG--EVLTRTRATSARREN----------------------GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HTTC--EEECSEEEEEEEEET----------------------TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HcCC--EEEcCcEEEEEEEeC----------------------CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 8888 899999999998754 4588888754345556799999999999874
No 136
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.87 E-value=1e-08 Score=103.66 Aligned_cols=35 Identities=26% Similarity=0.458 Sum_probs=32.7
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~ 38 (522)
++|+|||||++||++|..|++.|++|+||||.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 58999999999999999999999999999997754
No 137
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.84 E-value=2.3e-08 Score=100.17 Aligned_cols=36 Identities=33% Similarity=0.556 Sum_probs=33.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG 39 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~G 39 (522)
++||+|||||++|+++|..|++.|.+|+|+|++. +|
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~-~~ 40 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF-IG 40 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS-TT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC-CC
Confidence 4799999999999999999999999999999984 44
No 138
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.84 E-value=8.5e-09 Score=105.18 Aligned_cols=41 Identities=29% Similarity=0.434 Sum_probs=38.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
+||+|||||++|+++|..|++.|++|+|+|+++.+||.+..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t 42 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYS 42 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecc
Confidence 58999999999999999999999999999999999997763
No 139
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.83 E-value=1.2e-08 Score=102.24 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=33.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG 39 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~G 39 (522)
+||+|||||++|+++|..|++.|.+|+|+|+....+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~ 53 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGG 53 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCc
Confidence 699999999999999999999999999999986443
No 140
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.82 E-value=1.1e-08 Score=102.23 Aligned_cols=36 Identities=22% Similarity=0.384 Sum_probs=33.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG 39 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~G 39 (522)
+++|+|||||++|+++|..|+ +|.+|+|+|+++.+|
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g 44 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPG 44 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTT
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCcc
Confidence 479999999999999999999 599999999987665
No 141
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.81 E-value=1.9e-08 Score=101.55 Aligned_cols=35 Identities=29% Similarity=0.316 Sum_probs=32.6
Q ss_pred CCcEEEECCChhHHHHHHHHHh-cC-CceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLL-KG-FHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~-~g-~~v~i~e~~~~ 37 (522)
++||+|||||++|+++|..|++ .| .+|+|||+++.
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~ 57 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWL 57 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSST
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 4689999999999999999999 99 99999999873
No 142
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.80 E-value=2.7e-08 Score=106.54 Aligned_cols=141 Identities=18% Similarity=0.201 Sum_probs=89.0
Q ss_pred CcEEEECCChhHHHHHHHHHh-cCCceEEEecCCCccccccc---------c----------------ccceeecCC---
Q 009917 4 KQIAIVGAGVSGLLACKYLLL-KGFHPIVFEARSDIGGAWIK---------T----------------VETTMLQTP--- 54 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~-~g~~v~i~e~~~~~Gg~w~~---------~----------------~~~~~~~~~--- 54 (522)
.+|+|||||++||++|..|++ .|++|+|||+.+.++..... . ........+
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 689999999999999999999 99999999998765422110 0 000000000
Q ss_pred --cccee---ecCCCCCCCC-CCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCC
Q 009917 55 --KQLYQ---FSDYPWPDSV-TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPF 128 (522)
Q Consensus 55 --~~~~~---~~~~~~~~~~-~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~ 128 (522)
..+.. +......... .....+...+.++|.+.+.+++..-.++++++|++++.++ +.
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~--~~--------------- 175 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDH--GA--------------- 175 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECT--TC---------------
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECC--CC---------------
Confidence 01110 1110000000 1112466788899999998886433689999999998764 00
Q ss_pred CCCCcEEEEEecC---CCCceeEEEeCEEEEeecccC
Q 009917 129 GSRGKWTVAVEDA---KNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 129 ~~~~~~~v~~~~~---~~g~~~~~~~d~lvvAtG~~s 162 (522)
....+.|++++. .+|..+++++|+||.|+|..|
T Consensus 176 -~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 176 -ADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp -SSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred -CcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 012477887751 125556899999999999885
No 143
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.80 E-value=4.6e-08 Score=103.33 Aligned_cols=136 Identities=20% Similarity=0.183 Sum_probs=87.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceee------------cCCcccee------------
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTML------------QTPKQLYQ------------ 59 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~------------~~~~~~~~------------ 59 (522)
++|+|||+|++||++|..|.+.|.+|+|+|+.+.+||.....-.+... +.+..++.
T Consensus 127 ~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (572)
T 1d4d_A 127 TDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNINDP 206 (572)
T ss_dssp CSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 589999999999999999999999999999999888754321111100 00000000
Q ss_pred ----------------e--cCCCCC-----CC--CCC------CCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEc
Q 009917 60 ----------------F--SDYPWP-----DS--VTT------DFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFE 108 (522)
Q Consensus 60 ----------------~--~~~~~~-----~~--~~~------~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~ 108 (522)
+ ...++. .. ... ....+..+.+.|.+.+++.++ .++++++|+++..+
T Consensus 207 ~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv--~i~~~t~v~~l~~~ 284 (572)
T 1d4d_A 207 ELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGT--DIRLNSRVVRILED 284 (572)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEEEC
T ss_pred HHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCC--eEEecCEEEEEEEC
Confidence 0 001111 00 000 012356788889999998898 89999999999764
Q ss_pred CCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 109 GLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+ +...+-|.+.+. +|+..++.+|.||+|||.++
T Consensus 285 ~--------------------~g~v~GV~~~~~-~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 285 A--------------------SGKVTGVLVKGE-YTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp ----------------------CCEEEEEEEET-TTEEEEEECSEEEECCCCCT
T ss_pred C--------------------CCeEEEEEEEeC-CCcEEEEEcCEEEEeCCCCc
Confidence 2 012244666542 25556799999999999774
No 144
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.79 E-value=6.6e-08 Score=100.78 Aligned_cols=38 Identities=29% Similarity=0.457 Sum_probs=35.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGA 41 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~ 41 (522)
.||+|||||++||++|..|++.|.+|+|+||.+.+||.
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~ 79 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGA 79 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 68999999999999999999999999999999988764
No 145
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.78 E-value=2.9e-08 Score=99.69 Aligned_cols=37 Identities=24% Similarity=0.335 Sum_probs=33.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG 39 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~G 39 (522)
++||+|||||++|+++|..|++.|.+|+|+|+.+..+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 4799999999999999999999999999999986544
No 146
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.77 E-value=6.5e-09 Score=98.68 Aligned_cols=50 Identities=30% Similarity=0.484 Sum_probs=42.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc-cccceee
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTML 51 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~-~~~~~~~ 51 (522)
|. .||+|||||||||++|..|++.|++|+|||+++.+||.+.. ..++..+
T Consensus 1 Mt-~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~ 51 (336)
T 3kkj_A 1 MT-VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGAL 51 (336)
T ss_dssp -C-CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEE
T ss_pred CC-CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCcee
Confidence 55 79999999999999999999999999999999999998765 3444333
No 147
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.76 E-value=8.2e-09 Score=100.33 Aligned_cols=103 Identities=21% Similarity=0.307 Sum_probs=63.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCccc-cccc--cccceeecCCc-cceeecCCCCCCCCCCCC---
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGG-AWIK--TVETTMLQTPK-QLYQFSDYPWPDSVTTDF--- 73 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~Gg-~w~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--- 73 (522)
.+||+|||||++|+++|..|++. |++|+|+|+.+.+|| .|.. .+....+..+. ..+.-...++... ..|
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~--G~~~~~ 156 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDE--GDYVVV 156 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEEC--SSEEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCccccc--CCeEEE
Confidence 37999999999999999999997 999999999988774 4533 22222222111 0000001111110 011
Q ss_pred CChhHHHHHHHHHHHhc-CCccceEeeeeEEEEEEcC
Q 009917 74 PDHNQVLDYIQSYASHF-DLRKHIKFNRKVVGIEFEG 109 (522)
Q Consensus 74 ~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~ 109 (522)
....++.+.|.+.+..+ ++ .+.++++|+++..++
T Consensus 157 ~~~~d~~~~L~~~a~~~~gV--~i~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 157 KHAALFTSTVLSKVLQRPNV--KLFNATTVEDLITRK 191 (344)
T ss_dssp SCHHHHHHHHHHHHHTCTTE--EEEETEEEEEEEEEE
T ss_pred ecHHHHHHHHHHHHHhCCCC--EEEeCCEEEEEEecC
Confidence 12345556666666663 66 788899999887653
No 148
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.76 E-value=2.6e-08 Score=100.44 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=33.3
Q ss_pred CC-CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCc
Q 009917 1 ME-KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (522)
Q Consensus 1 m~-~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~ 38 (522)
|. ..||+|||||++|+++|..|++.|.+|+|+|+.+..
T Consensus 1 M~~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 1 MTESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 54 379999999999999999999999999999998654
No 149
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.75 E-value=1.8e-08 Score=102.42 Aligned_cols=41 Identities=39% Similarity=0.651 Sum_probs=37.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
+||+|||||++||++|..|++.|.+|+|+|+++.+||....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTN 41 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEE
Confidence 48999999999999999999999999999999999986553
No 150
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.71 E-value=4.6e-08 Score=99.49 Aligned_cols=40 Identities=33% Similarity=0.519 Sum_probs=37.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccccc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWI 43 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~ 43 (522)
+||+|||||.+||++|..|++.|.+|+|+|+++.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 4899999999999999999999999999999999988654
No 151
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.69 E-value=6.6e-08 Score=99.60 Aligned_cols=40 Identities=33% Similarity=0.576 Sum_probs=36.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcC------CceEEEecCCCccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKG------FHPIVFEARSDIGGAW 42 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g------~~v~i~e~~~~~Gg~w 42 (522)
++||+|||||++||++|..|.+.| ++|+|+|+++.+||..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceE
Confidence 369999999999999999999999 9999999999998743
No 152
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.69 E-value=1.3e-07 Score=101.47 Aligned_cols=105 Identities=17% Similarity=0.158 Sum_probs=64.9
Q ss_pred CCcEEEECCChhHHHHHHHHHh-----cCCceEEEecCCCccc------ccc-------------c------cccceeec
Q 009917 3 KKQIAIVGAGVSGLLACKYLLL-----KGFHPIVFEARSDIGG------AWI-------------K------TVETTMLQ 52 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~-----~g~~v~i~e~~~~~Gg------~w~-------------~------~~~~~~~~ 52 (522)
+.+|+|||||++||++|..|++ .|++|+|||+.+.... .+. . ......+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 3689999999999999999999 9999999998764321 111 0 00011110
Q ss_pred CCc---cce---eecCCCCCC-CCCCCCCChhHHHHHHHHHHHhcC---CccceEeeeeEEEEEEcC
Q 009917 53 TPK---QLY---QFSDYPWPD-SVTTDFPDHNQVLDYIQSYASHFD---LRKHIKFNRKVVGIEFEG 109 (522)
Q Consensus 53 ~~~---~~~---~~~~~~~~~-~~~~~~~~~~~~~~yl~~~~~~~~---l~~~i~~~~~V~~v~~~~ 109 (522)
.+. .+. .+.+..... .......++..+.++|.+.+.+++ + .++++++|++++.+.
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v--~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRI--KVERPLIPEKMEIDS 152 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSS--CEECSEEEEEEEECG
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCce--EEEeCCEEEEEEecC
Confidence 000 000 011100000 001122467788899999888876 6 799999999998753
No 153
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.66 E-value=4.4e-08 Score=102.86 Aligned_cols=169 Identities=20% Similarity=0.215 Sum_probs=99.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC-Cccccccccccceeec-----------CC--------ccceeecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS-DIGGAWIKTVETTMLQ-----------TP--------KQLYQFSD 62 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~-~~Gg~w~~~~~~~~~~-----------~~--------~~~~~~~~ 62 (522)
.+||+|||||++|+++|..|++.|.+|+|+|++. .+|+.+.. |..... .. .....|..
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~--ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCN--PAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSC--SEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccc--cchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 4799999999999999999999999999999975 45543221 111000 00 00011110
Q ss_pred CC---CCCCC-CCCCCChhHHHHHHHHHHHhc-CCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEE-E
Q 009917 63 YP---WPDSV-TTDFPDHNQVLDYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT-V 136 (522)
Q Consensus 63 ~~---~~~~~-~~~~~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 136 (522)
.. -+..+ .........+.+++.+.++++ ++ .+ ++.+|+.+..++ +... |
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV--~I-~~~~V~~L~~d~----------------------g~V~GV 153 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNI--DL-LQDTVIGVSANS----------------------GKFSSV 153 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEEET----------------------TEEEEE
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCCC--EE-EeeEEEEEEecC----------------------CEEEEE
Confidence 00 00000 001224457788888888775 66 55 567899887654 2233 6
Q ss_pred EEecCCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcCCCCHH
Q 009917 137 AVEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSAL 216 (522)
Q Consensus 137 ~~~~~~~g~~~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~G~sg~ 216 (522)
.+.++ .++.+|.||+|||.++ +.+.++ |...+ .+.+++ | +.+|+
T Consensus 154 ~t~~G-----~~i~Ad~VVLATG~~s---~~~i~~---G~~~~----------------------~~g~~v--G-~~~a~ 197 (641)
T 3cp8_A 154 TVRSG-----RAIQAKAAILACGTFL---NGLIHI---GMDHF----------------------PGGRST--A-EPPVE 197 (641)
T ss_dssp EETTS-----CEEEEEEEEECCTTCB---TCEEEE---TTEEE----------------------ECSSST--T-SCCBC
T ss_pred EECCC-----cEEEeCEEEECcCCCC---Ccccee---eeeee----------------------cccccc--C-Cchhh
Confidence 55554 4799999999999653 322222 32221 111221 3 57788
Q ss_pred HHHHHHhhhcCCCCceEEEEc
Q 009917 217 DIAMECTTANGLENPCTVLYR 237 (522)
Q Consensus 217 dia~~l~~~~~~~~~Vt~v~r 237 (522)
+++..|...+.. |+.+..
T Consensus 198 ~la~~L~~~G~k---v~~l~t 215 (641)
T 3cp8_A 198 GLTESLASLGFS---FGRLKT 215 (641)
T ss_dssp SHHHHHHHTTCC---EEEEEE
T ss_pred hhHHHHHhCCce---EEeecC
Confidence 888888887653 766543
No 154
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.65 E-value=1.1e-07 Score=99.54 Aligned_cols=41 Identities=39% Similarity=0.662 Sum_probs=38.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWI 43 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~ 43 (522)
+++|+|||||++||+||..|++.|++|+|+|+++.+||...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTY 44 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcee
Confidence 47999999999999999999999999999999999998654
No 155
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.63 E-value=3.8e-08 Score=91.33 Aligned_cols=33 Identities=18% Similarity=0.106 Sum_probs=28.9
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
.+|+|||+|.+|+++|..|++.+. +|+++.+.+
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~---~v~lie~~~ 36 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGV---RVGLLTQSL 36 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC---CEEEEecCC
Confidence 369999999999999999999765 499999873
No 156
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.63 E-value=2.5e-07 Score=97.97 Aligned_cols=37 Identities=24% Similarity=0.231 Sum_probs=33.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhcC--CceEEEecCCCcc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARSDIG 39 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g--~~v~i~e~~~~~G 39 (522)
..||+|||||++|+++|..|++.| .+|+|+|+.+..+
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~ 43 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMR 43 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCC
Confidence 369999999999999999999999 9999999986543
No 157
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.62 E-value=6.4e-08 Score=101.61 Aligned_cols=34 Identities=32% Similarity=0.544 Sum_probs=31.9
Q ss_pred CCcEEEECCChhHHHHHHHHHh---cCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLL---KGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~---~g~~v~i~e~~~ 36 (522)
.++|+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 4799999999999999999999 999999999964
No 158
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.62 E-value=5.9e-08 Score=96.11 Aligned_cols=91 Identities=22% Similarity=0.304 Sum_probs=59.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecC-CCccccccc-cccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR-SDIGGAWIK-TVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~-~~~Gg~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
.++|+|||||++||++|..|.+.|++|+|||++ +.+||.|.. ..+. +.+.. +....+.+.. ...+. ....
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~---~~~~~-~~~~~~~~e~--G~~~~--~~~~ 115 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKK---GEPSP-FADPAQYAEA--GAMRL--PSFH 115 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCT---TSCCS-SSSTTCCEES--SCCCE--ETTC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccc---ccccc-ccCCCcEEec--Cceee--cchH
Confidence 479999999999999999999999999999999 999998875 2111 11110 0000000000 01111 1234
Q ss_pred HHHHHHHHhcCCccceEeeee
Q 009917 81 DYIQSYASHFDLRKHIKFNRK 101 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~ 101 (522)
.++.++++++++...+.++..
T Consensus 116 ~~~~~~~~~lGl~~~~~~~~~ 136 (376)
T 2e1m_A 116 PLTLALIDKLGLKRRLFFNVD 136 (376)
T ss_dssp HHHHHHHHHTTCCEEEECSSC
T ss_pred HHHHHHHHHcCCCcceeeccc
Confidence 678888999999666665544
No 159
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.62 E-value=4.2e-07 Score=96.06 Aligned_cols=137 Identities=8% Similarity=0.001 Sum_probs=83.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccc--ccc----cccce-eecCC-----------ccc--------
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGA--WIK----TVETT-MLQTP-----------KQL-------- 57 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~--w~~----~~~~~-~~~~~-----------~~~-------- 57 (522)
.||+|||||++|+++|..|++.|.+|+|+|+.+..+|. |.. ...+. ..+.+ ...
T Consensus 8 ~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 87 (588)
T 2wdq_A 8 FDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEY 87 (588)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 68999999999999999999999999999998765431 110 00000 00000 000
Q ss_pred -----------eeecCCCCCCC------------CC---------C-CC---CChhHHHHHHHHHHHhcCCccceEeeee
Q 009917 58 -----------YQFSDYPWPDS------------VT---------T-DF---PDHNQVLDYIQSYASHFDLRKHIKFNRK 101 (522)
Q Consensus 58 -----------~~~~~~~~~~~------------~~---------~-~~---~~~~~~~~yl~~~~~~~~l~~~i~~~~~ 101 (522)
+.-...++... .. . .+ .++..+.+.|.+.+.+.++ .+.++++
T Consensus 88 ~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv--~i~~~~~ 165 (588)
T 2wdq_A 88 MCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHT--TIFSEWY 165 (588)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTC--EEEETEE
T ss_pred HHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCC--EEEeCcE
Confidence 00001111100 00 0 00 1235677788888888888 8999999
Q ss_pred EEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 102 VVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 102 V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
|+++..+. + ...+-|.+.+..+|+..++.++.||+|||.++
T Consensus 166 v~~L~~~~--~------------------g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 166 ALDLVKNQ--D------------------GAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp EEEEEECT--T------------------SCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred EEEEEECC--C------------------CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 99998752 0 12244555543346566799999999999863
No 160
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.61 E-value=1.2e-07 Score=97.89 Aligned_cols=41 Identities=32% Similarity=0.558 Sum_probs=37.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWI 43 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~ 43 (522)
.+||+|||||++||++|..|++.|++|+|+|+++.+||...
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVG 56 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceee
Confidence 47999999999999999999999999999999999998544
No 161
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.61 E-value=2.8e-07 Score=94.84 Aligned_cols=101 Identities=22% Similarity=0.267 Sum_probs=79.3
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+|+|+.+.+. +. ...++.+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 216 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL-------------------------------PQ--GDPETAALL 216 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999976532 00 125778888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|++++..+ +...|++.+..+|+..++.+|.||+|+|..
T Consensus 217 ~~~l~~~gV--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 217 RRALEKEGI--RVRTKTKAVGYEKKK----------------------DGLHVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp HHHHHHTTC--EEECSEEEEEEEEET----------------------TEEEEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred HHHHHhcCC--EEEcCCEEEEEEEeC----------------------CEEEEEEeecCCCceeEEEcCEEEECCCcc
Confidence 888888898 899999999998754 335676652111333479999999999954
No 162
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.60 E-value=1.8e-07 Score=96.35 Aligned_cols=175 Identities=17% Similarity=0.073 Sum_probs=92.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCccccccccccceeecCCccceeecCCCCCC-------CCCCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPD-------SVTTDF 73 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 73 (522)
.++|+|||+|.+|+.+|..|.+. +.+|+++++++.+-..-...+ ...+..|...-.|...+... .....|
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~-~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~ 305 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPF-VNEVFAPKFTDLIYSREHAERERLLREYHNTNY 305 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHH-HHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCcc-chhccChhHHHHHhcCCHHHHHHHHHHhhccCC
Confidence 36899999999999999999998 889999999875310000000 00000000000000000000 000000
Q ss_pred --CChhHHH-----HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCce
Q 009917 74 --PDHNQVL-----DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHST 146 (522)
Q Consensus 74 --~~~~~~~-----~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~ 146 (522)
.....+. -|.+.+....++ .+.++++|++++..+ +.|.|++.+..+|+.
T Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~v--~i~~~~~v~~v~~~~----------------------~~~~v~~~~~~~g~~ 361 (463)
T 3s5w_A 306 SVVDTDLIERIYGVFYRQKVSGIPRH--AFRCMTTVERATATA----------------------QGIELALRDAGSGEL 361 (463)
T ss_dssp SCBCHHHHHHHHHHHHHHHHHCCCCS--EEETTEEEEEEEEET----------------------TEEEEEEEETTTCCE
T ss_pred CcCCHHHHHHHHHHHHHHHhcCCCCe--EEEeCCEEEEEEecC----------------------CEEEEEEEEcCCCCe
Confidence 0001011 111222222456 788899999998764 458999987655777
Q ss_pred eEEEeCEEEEeecccCCCCCCCCCCCCCCCCccCceEEeeccCCCCchHhhhhccCCCEEEEEcC
Q 009917 147 EVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGL 211 (522)
Q Consensus 147 ~~~~~d~lvvAtG~~s~~p~~P~~p~~~g~~~f~g~~~hs~~~~~~~~~~~~~~~~gk~VvVIG~ 211 (522)
+++.+|.||+|||..+ .+..+-+. ++....|.+.+..+++... ......+|-++|.
T Consensus 362 ~~~~~D~Vv~AtG~~p-~~~~~~l~---~l~~~~g~i~v~~~~~~~~-----~~~~~~~Ifa~G~ 417 (463)
T 3s5w_A 362 SVETYDAVILATGYER-QLHRQLLE---PLAEYLGDHEIGRDYRLQT-----DERCKVAIYAQGF 417 (463)
T ss_dssp EEEEESEEEECCCEEC-CC-CTTTG---GGGGGBC--CCCTTSBCCB-----CTTBCSEEEESSC
T ss_pred EEEECCEEEEeeCCCC-CCccchhH---HHHHHhCCcccCccccccc-----CCCCCCeEEEcCC
Confidence 7899999999999652 21133333 3332225566666665321 1122467888885
No 163
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.60 E-value=1.3e-07 Score=91.25 Aligned_cols=103 Identities=18% Similarity=0.310 Sum_probs=64.3
Q ss_pred CcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCcc-ccccc--cccceeecCCcc-ceeecCCCCCCCCCCCC--CC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIG-GAWIK--TVETTMLQTPKQ-LYQFSDYPWPDSVTTDF--PD 75 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~G-g~w~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~ 75 (522)
.||+|||||++|+++|..|++. |++|+|+|+.+.+| |.|.. .+....+..... .+.-...++... ...+ ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~-g~~~~~~~ 144 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDE-GDYVVVKH 144 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEEC-SSEEEESC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccC-CCeEEEcc
Confidence 4899999999999999999998 99999999998887 45643 222222221110 000011111110 0111 13
Q ss_pred hhHHHHHHHHHHHhc-CCccceEeeeeEEEEEEcC
Q 009917 76 HNQVLDYIQSYASHF-DLRKHIKFNRKVVGIEFEG 109 (522)
Q Consensus 76 ~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~ 109 (522)
..++...+.+.+... ++ .+..+++|+++..+.
T Consensus 145 ~~~~~~~L~~~a~~~~GV--~i~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNV--KLFNATCVEDLVTRP 177 (326)
T ss_dssp HHHHHHHHHHHHHTSTTE--EEETTEEEEEEEECC
T ss_pred hHHHHHHHHHHHHHhcCc--EEEecceeeeeeecc
Confidence 455666666666664 66 778889999998753
No 164
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.60 E-value=2.4e-07 Score=95.45 Aligned_cols=36 Identities=33% Similarity=0.428 Sum_probs=32.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCceEEEecCCCcccc
Q 009917 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGA 41 (522)
Q Consensus 5 ~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~ 41 (522)
||+|||||++|+++|..|++.|.+|+|+|+. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 6999999999999999999999999999998 55553
No 165
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.59 E-value=3.2e-07 Score=94.80 Aligned_cols=103 Identities=24% Similarity=0.374 Sum_probs=80.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|++.|.+|+++|+.+.+.. . -..++.+++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~l 230 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-------------------------------S--MDGEVAKAT 230 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-------------------------------S--SCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-------------------------------c--cCHHHHHHH
Confidence 6899999999999999999999999999999876421 0 115778888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++... .++...|++.+..++..+++.+|.||+|+|..
T Consensus 231 ~~~l~~~gv--~i~~~~~v~~i~~~~--------------------~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 231 QKFLKKQGL--DFKLSTKVISAKRND--------------------DKNVVEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp HHHHHHTTC--EEECSEEEEEEEEET--------------------TTTEEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCCEEEEEEEec--------------------CCCeEEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 888888999 899999999998731 01336677663222334679999999999954
No 166
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.59 E-value=3.5e-07 Score=96.92 Aligned_cols=37 Identities=27% Similarity=0.239 Sum_probs=33.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG 40 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg 40 (522)
.||+|||||++||++|..|++.|.+|+|+|+....+|
T Consensus 19 ~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g 55 (621)
T 2h88_A 19 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRS 55 (621)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 6899999999999999999999999999999865443
No 167
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.58 E-value=2e-08 Score=100.62 Aligned_cols=119 Identities=14% Similarity=0.139 Sum_probs=74.7
Q ss_pred CcEEEECCChhHHHHHHHHHhc--CCceEEEecCCCc---cccccc---cc-----ccee----ec---CCccceeec--
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDI---GGAWIK---TV-----ETTM----LQ---TPKQLYQFS-- 61 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~~---Gg~w~~---~~-----~~~~----~~---~~~~~~~~~-- 61 (522)
++|+|||||++|+++|..|++. |++|+|+|+++.+ |..... .. +++. +. .+...+.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 4899999999999999999998 9999999998766 321110 00 0000 00 000001110
Q ss_pred CCCCCCCCCC--CCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEe
Q 009917 62 DYPWPDSVTT--DFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVE 139 (522)
Q Consensus 62 ~~~~~~~~~~--~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 139 (522)
...+...... ....+.++.++|.+.+.+.++ .++++++|++++..
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~~------------------------------- 127 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGI--AIRFESPLLEHGEL------------------------------- 127 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTC--EEETTCCCCSGGGC-------------------------------
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCC--EEEeCCEeccchhc-------------------------------
Confidence 0000000001 124678889999999988887 78888888766421
Q ss_pred cCCCCceeEEEeCEEEEeecccC
Q 009917 140 DAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 140 ~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
.++.+|.||.|+|..|
T Consensus 128 -------~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 128 -------PLADYDLVVLANGVNH 143 (381)
T ss_dssp -------CGGGCSEEEECCGGGG
T ss_pred -------ccccCCEEEECCCCCc
Confidence 1247999999999985
No 168
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.57 E-value=3.6e-07 Score=96.36 Aligned_cols=38 Identities=18% Similarity=0.297 Sum_probs=34.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG 40 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg 40 (522)
..||+|||||++|+++|..|++.|++|+|+|+.+-.+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 47999999999999999999999999999999864444
No 169
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.57 E-value=2.6e-07 Score=94.89 Aligned_cols=96 Identities=28% Similarity=0.278 Sum_probs=77.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|++|+.+|..|++.|.+|+++|+.+.+. + . ...++.+.+
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l--------------------------~-----~--~~~~~~~~l 214 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL--------------------------P-----T--MDLEVSRAA 214 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------T-----T--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc--------------------------c-----c--cCHHHHHHH
Confidence 689999999999999999999999999999976531 1 0 125677888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .++++++|++++..+ +.+.+++.++ +++.+|.||+|+|..
T Consensus 215 ~~~l~~~Gv--~i~~~~~V~~i~~~~----------------------~~v~v~~~~g-----~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 215 ERVFKKQGL--TIRTGVRVTAVVPEA----------------------KGARVELEGG-----EVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHTC--EEECSCCEEEEEEET----------------------TEEEEEETTS-----CEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEECCEEEEEEEeC----------------------CEEEEEECCC-----eEEEcCEEEECcCCC
Confidence 888888888 899999999998754 2355665444 578999999999965
No 170
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.57 E-value=2.5e-07 Score=102.29 Aligned_cols=35 Identities=26% Similarity=0.458 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC-ceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~~ 37 (522)
..||+|||||++|+++|..|++.|. +|+|+|+++.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 5799999999999999999999998 9999999875
No 171
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.56 E-value=4e-07 Score=91.28 Aligned_cols=98 Identities=18% Similarity=0.263 Sum_probs=78.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|+.|+.+|..|.+.|.+|+++|+.+.+. +.+ ...++.++
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------~~~-~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVM-------------------------------PGL-LHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TTT-SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchh-------------------------------hcc-cCHHHHHH
Confidence 4789999999999999999999999999999976532 111 12567788
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+..++.++ .++++++|.+++..+ +.+.|++.++ +++.+|.||+|+|..
T Consensus 193 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~g-----~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 193 VQAGLEGLGV--RFHLGPVLASLKKAG----------------------EGLEAHLSDG-----EVIPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHTTTC--EEEESCCEEEEEEET----------------------TEEEEEETTS-----CEEEESEEEECSCEE
T ss_pred HHHHHHHcCC--EEEeCCEEEEEEecC----------------------CEEEEEECCC-----CEEECCEEEECcCCC
Confidence 8888888888 899999999998754 3466777655 579999999999965
No 172
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.56 E-value=7.5e-07 Score=95.05 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=33.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~ 38 (522)
..||+|||||.+||++|..|++.|.+|+|+|+.+..
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 479999999999999999999999999999998754
No 173
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.54 E-value=1.1e-07 Score=96.22 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=31.9
Q ss_pred CcEEEECCChhHHHHHHHHHhc--CCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~ 37 (522)
+||+|||||++|+++|..|++. |++|+|||+...
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 6899999999999999999999 999999999753
No 174
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.53 E-value=4.5e-07 Score=95.32 Aligned_cols=61 Identities=16% Similarity=0.257 Sum_probs=46.5
Q ss_pred CChhHHHHHHHHHHHhc-CCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeC
Q 009917 74 PDHNQVLDYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVD 152 (522)
Q Consensus 74 ~~~~~~~~yl~~~~~~~-~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d 152 (522)
.....+.++|.+.+++. ++ .+.++ +|++++..+ +...+.|++.++ +++.+|
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv--~i~~~-~V~~i~~~~--------------------~g~~~~v~~~~G-----~~i~ad 242 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGV--RHVED-RVEHVQRDA--------------------NGNIESVRTATG-----RVFDAD 242 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCC--EEEEC-CEEEEEECT--------------------TSCEEEEEETTS-----CEEECS
T ss_pred EcHHHHHHHHHHHHHhcCCc--EEEEC-eEeEEEEcC--------------------CCCEEEEEECCC-----CEEECC
Confidence 45678889999999988 88 88899 999998754 011245655554 479999
Q ss_pred EEEEeecccC
Q 009917 153 FVILCVGRFS 162 (522)
Q Consensus 153 ~lvvAtG~~s 162 (522)
.||+|+|..|
T Consensus 243 ~vI~A~G~~S 252 (550)
T 2e4g_A 243 LFVDCSGFRG 252 (550)
T ss_dssp EEEECCGGGC
T ss_pred EEEECCCCch
Confidence 9999999874
No 175
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.52 E-value=2.6e-07 Score=94.59 Aligned_cols=38 Identities=34% Similarity=0.411 Sum_probs=33.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcC-CceEEEecCCCc
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARSDI 38 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g-~~v~i~e~~~~~ 38 (522)
|.++||+|||||++|+++|..|++.| .+|+|+|+...+
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 55679999999999999999999999 999999994433
No 176
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.52 E-value=4.3e-07 Score=93.04 Aligned_cols=98 Identities=20% Similarity=0.234 Sum_probs=78.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|+.|+.+|..|.+.|.+|+++|+.+.+. +.+ ..++.++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~--~~~~~~~ 213 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-------------------------------PSF--DPMISET 213 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TTS--CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-------------------------------hhh--hHHHHHH
Confidence 3689999999999999999999999999999976531 111 1467788
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+..++.++ .++++++|.+++..+ ++...|++.++ +++.+|.||+|+|..
T Consensus 214 l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~g-----~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 214 LVEVMNAEGP--QLHTNAIPKAVVKNT---------------------DGSLTLELEDG-----RSETVDCLIWAIGRE 264 (450)
T ss_dssp HHHHHHHHSC--EEECSCCEEEEEECT---------------------TSCEEEEETTS-----CEEEESEEEECSCEE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEEeC---------------------CcEEEEEECCC-----cEEEcCEEEECCCCC
Confidence 8888888898 899999999998753 23367777665 478999999999954
No 177
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.52 E-value=1.8e-06 Score=89.62 Aligned_cols=102 Identities=23% Similarity=0.350 Sum_probs=79.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+++
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~l 223 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-------------------------------RK--FDESVINVL 223 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-------------------------------cc--cchhhHHHH
Confidence 689999999999999999999999999999976531 11 125677888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccCC
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~ 163 (522)
.+..++.++ .+.++++|.+++..+ ++...|++.++ +. ++.+|.||+|+|.
T Consensus 224 ~~~l~~~gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~g---~~-~~~~D~vi~a~G~--- 273 (500)
T 1onf_A 224 ENDMKKNNI--NIVTFADVVEIKKVS---------------------DKNLSIHLSDG---RI-YEHFDHVIYCVGR--- 273 (500)
T ss_dssp HHHHHHTTC--EEECSCCEEEEEESS---------------------TTCEEEEETTS---CE-EEEESEEEECCCB---
T ss_pred HHHHHhCCC--EEEECCEEEEEEEcC---------------------CceEEEEECCC---cE-EEECCEEEECCCC---
Confidence 888888899 899999999998753 13366776654 11 3899999999995
Q ss_pred CCCCC
Q 009917 164 VPNIP 168 (522)
Q Consensus 164 ~p~~P 168 (522)
.|+..
T Consensus 274 ~p~~~ 278 (500)
T 1onf_A 274 SPDTE 278 (500)
T ss_dssp CCTTT
T ss_pred CcCCC
Confidence 45553
No 178
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.52 E-value=2.5e-07 Score=96.85 Aligned_cols=36 Identities=25% Similarity=0.321 Sum_probs=33.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG 40 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg 40 (522)
.||+|||||++||++|..|++ |.+|+|+|+.+..+|
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 699999999999999999999 999999999886654
No 179
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.52 E-value=7.1e-07 Score=91.57 Aligned_cols=99 Identities=21% Similarity=0.242 Sum_probs=78.3
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++|+.+.+. + . -..++.+++
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------~-----~--~~~~~~~~l 217 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL--------------------------S-----G--FEKQMAAII 217 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------T-----T--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc--------------------------c-----c--cCHHHHHHH
Confidence 689999999999999999999999999999976542 1 0 125677888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++..+ +...|++.+. |...++.+|.||+|+|..
T Consensus 218 ~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~--g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 218 KKRLKKKGV--EVVTNALAKGAEERE----------------------DGVTVTYEAN--GETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHTTC--EEEESEEEEEEEEET----------------------TEEEEEEEET--TEEEEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCCEEEEEEEeC----------------------CeEEEEEEeC--CceeEEEcCEEEECcCCC
Confidence 888888898 899999999998754 2355665521 333679999999999954
No 180
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.51 E-value=6.9e-07 Score=93.42 Aligned_cols=59 Identities=12% Similarity=0.110 Sum_probs=44.4
Q ss_pred ChhHHHHHHHHHHHh-cCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCC-cEEEEEecCCCCceeEEEeC
Q 009917 75 DHNQVLDYIQSYASH-FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRG-KWTVAVEDAKNHSTEVHQVD 152 (522)
Q Consensus 75 ~~~~~~~yl~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~g~~~~~~~d 152 (522)
....+.++|.+.+.+ .++ .++++ +|++++.++ ++ ...|++.++ .++.+|
T Consensus 173 ~r~~l~~~L~~~a~~~~Gv--~i~~~-~v~~i~~~~---------------------~g~~~~v~~~~g-----~~i~ad 223 (526)
T 2pyx_A 173 NAAKFSQLLTEHCTQKLGV--THIRD-HVSQIINNQ---------------------HGDIEKLITKQN-----GEISGQ 223 (526)
T ss_dssp CHHHHHHHHHHHHHHTSCC--EEEEC-CEEEEEECT---------------------TSCEEEEEESSS-----CEEECS
T ss_pred cHHHHHHHHHHHHHhcCCC--EEEEe-EEEEEEecC---------------------CCcEEEEEECCC-----CEEEcC
Confidence 567788899999988 788 78888 699998754 12 234555443 359999
Q ss_pred EEEEeecccC
Q 009917 153 FVILCVGRFS 162 (522)
Q Consensus 153 ~lvvAtG~~s 162 (522)
.||.|+|..|
T Consensus 224 ~vV~AdG~~S 233 (526)
T 2pyx_A 224 LFIDCTGAKS 233 (526)
T ss_dssp EEEECSGGGC
T ss_pred EEEECCCcch
Confidence 9999999875
No 181
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.51 E-value=7.6e-07 Score=92.29 Aligned_cols=105 Identities=23% Similarity=0.289 Sum_probs=83.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ..++.+.+
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~--d~~~~~~l 245 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL-------------------------------GGM--DGEVAKQL 245 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------SSS--CHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc-------------------------------ccC--CHHHHHHH
Confidence 689999999999999999999999999999877542 111 25677888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccCC
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~ 163 (522)
.+..++.++ .+.++++|.+++..+ +...|++.+..+|+.+++.+|.||+|+|.
T Consensus 246 ~~~l~~~gV--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~--- 298 (491)
T 3urh_A 246 QRMLTKQGI--DFKLGAKVTGAVKSG----------------------DGAKVTFEPVKGGEATTLDAEVVLIATGR--- 298 (491)
T ss_dssp HHHHHHTTC--EEECSEEEEEEEEET----------------------TEEEEEEEETTSCCCEEEEESEEEECCCC---
T ss_pred HHHHHhCCC--EEEECCeEEEEEEeC----------------------CEEEEEEEecCCCceEEEEcCEEEEeeCC---
Confidence 888888898 899999999998764 34667777543354568999999999994
Q ss_pred CCCCC
Q 009917 164 VPNIP 168 (522)
Q Consensus 164 ~p~~P 168 (522)
.|+..
T Consensus 299 ~p~~~ 303 (491)
T 3urh_A 299 KPSTD 303 (491)
T ss_dssp EECCT
T ss_pred ccCCC
Confidence 45543
No 182
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.50 E-value=3.5e-07 Score=95.36 Aligned_cols=60 Identities=17% Similarity=0.173 Sum_probs=45.8
Q ss_pred ChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEE
Q 009917 75 DHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFV 154 (522)
Q Consensus 75 ~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~l 154 (522)
....+.+.|.+.+.+.|+ .++++ +|++++.++ +...+.|++.++ +++.+|.|
T Consensus 171 ~~~~l~~~L~~~a~~~gv--~~~~~-~v~~i~~~~--------------------~~~~~~v~~~~g-----~~~~ad~v 222 (511)
T 2weu_A 171 DADEVARYLSEYAIARGV--RHVVD-DVQHVGQDE--------------------RGWISGVHTKQH-----GEISGDLF 222 (511)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEEEC-CEEEEEECT--------------------TSCEEEEEESSS-----CEEECSEE
T ss_pred cHHHHHHHHHHHHHHCCC--EEEEC-eEeEEEEcC--------------------CCCEEEEEECCC-----CEEEcCEE
Confidence 567888899998888888 78888 999998753 011245666554 47999999
Q ss_pred EEeecccC
Q 009917 155 ILCVGRFS 162 (522)
Q Consensus 155 vvAtG~~s 162 (522)
|.|+|..|
T Consensus 223 V~A~G~~S 230 (511)
T 2weu_A 223 VDCTGFRG 230 (511)
T ss_dssp EECCGGGC
T ss_pred EECCCcch
Confidence 99999875
No 183
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.48 E-value=1e-06 Score=90.92 Aligned_cols=103 Identities=24% Similarity=0.382 Sum_probs=79.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ..+ ..++.+++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------~----~~~--~~~~~~~l 226 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG--------------------------G----VGI--DMEISKNF 226 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------C----SSC--CHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC--------------------------C----ccc--CHHHHHHH
Confidence 689999999999999999999999999999976532 0 011 25678888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++..+ ++...|++.+..++..+++.+|.||+|+|..
T Consensus 227 ~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 227 QRILQKQGF--KFKLNTKVTGATKKS---------------------DGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHTTC--EEECSEEEEEEEECT---------------------TSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCceEEEEEEcC---------------------CceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 888888999 899999999998754 1225666543111223678999999999954
No 184
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.48 E-value=6.2e-07 Score=97.32 Aligned_cols=38 Identities=42% Similarity=0.657 Sum_probs=36.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG 40 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg 40 (522)
.++|+|||||++|+++|..|++.|++|+|+|+++.+||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 46999999999999999999999999999999998888
No 185
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.46 E-value=7.2e-07 Score=91.70 Aligned_cols=97 Identities=22% Similarity=0.261 Sum_probs=77.3
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ..++.+.+
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~~--~~~~~~~l 213 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-------------------------------FQF--DPLLSATL 213 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TTS--CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-------------------------------ccc--CHHHHHHH
Confidence 689999999999999999999999999999976531 111 14677788
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .++++++|++++..+ +...|++.++ +. ++.+|.||+|+|..
T Consensus 214 ~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~G---~~-~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 214 AENMHAQGI--ETHLEFAVAALERDA----------------------QGTTLVAQDG---TR-LEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHTTC--EEESSCCEEEEEEET----------------------TEEEEEETTC---CE-EEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCCEEEEEEEeC----------------------CeEEEEEeCC---cE-EEEcCEEEECCCCC
Confidence 888888898 899999999998754 2366776654 21 79999999999954
No 186
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.46 E-value=6.7e-07 Score=92.18 Aligned_cols=101 Identities=24% Similarity=0.322 Sum_probs=79.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+++
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~~--~~~~~~~~l 224 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-------------------------------PT--MDAEIRKQF 224 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------cc--ccHHHHHHH
Confidence 689999999999999999999999999999986532 10 125778888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++..+ +...|++.+..+|+.+++.+|.||+|+|..
T Consensus 225 ~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 225 QRSLEKQGM--KFKLKTKVVGVDTSG----------------------DGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HHHHHHSSC--CEECSEEEEEEECSS----------------------SSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HHHHHHcCC--EEEeCCEEEEEEEcC----------------------CeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 888888999 899999999998653 236666653212334679999999999964
No 187
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.46 E-value=6.3e-07 Score=91.73 Aligned_cols=101 Identities=20% Similarity=0.267 Sum_probs=77.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|++|+.+|..|++.|.+|+++|+.+.+.. .+ ...++.++
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~-~~~~~~~~ 196 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG-------------------------------VY-LDKEFTDV 196 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------TT-CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc-------------------------------cc-CCHHHHHH
Confidence 47899999999999999999999999999999765321 00 12577888
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+.+.+++.++ .++++++|.+++..+ ..+.|.+ ++ .++.+|.||+|+|..
T Consensus 197 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~v~~v~~-~~-----~~i~~d~vi~a~G~~- 245 (447)
T 1nhp_A 197 LTEEMEANNI--TIATGETVERYEGDG----------------------RVQKVVT-DK-----NAYDADLVVVAVGVR- 245 (447)
T ss_dssp HHHHHHTTTE--EEEESCCEEEEECSS----------------------BCCEEEE-SS-----CEEECSEEEECSCEE-
T ss_pred HHHHHHhCCC--EEEcCCEEEEEEccC----------------------cEEEEEE-CC-----CEEECCEEEECcCCC-
Confidence 8888888898 899999999997542 2234554 32 468999999999954
Q ss_pred CCCCCC
Q 009917 163 DVPNIP 168 (522)
Q Consensus 163 ~~p~~P 168 (522)
|+.+
T Consensus 246 --p~~~ 249 (447)
T 1nhp_A 246 --PNTA 249 (447)
T ss_dssp --ESCG
T ss_pred --CChH
Confidence 5544
No 188
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.44 E-value=1.6e-06 Score=89.16 Aligned_cols=99 Identities=22% Similarity=0.200 Sum_probs=78.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+++
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 218 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-------------------------------PN--EDADVSKEI 218 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999986531 11 125677888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++..+ +...+++.+. |+.+++.+|.||+|+|..
T Consensus 219 ~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~--g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 219 EKQFKKLGV--TILTATKVESIADGG----------------------SQVTVTVTKD--GVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HHHHHHHTC--EEECSCEEEEEEECS----------------------SCEEEEEESS--SCEEEEEESEEEECSCEE
T ss_pred HHHHHHcCC--EEEeCcEEEEEEEcC----------------------CeEEEEEEcC--CceEEEEcCEEEECCCCC
Confidence 888888898 899999999998754 2355666521 334578999999999954
No 189
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.43 E-value=1.2e-06 Score=88.61 Aligned_cols=99 Identities=21% Similarity=0.268 Sum_probs=79.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .. ...++.++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l--------------------------~----~~--~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL--------------------------A----RV--AGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT--------------------------T----TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh--------------------------h----hh--cCHHHHHH
Confidence 4689999999999999999999999999999976531 0 00 12678888
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+..++.++ .++++++|.+++..+ .....|++.++ +++.+|.||+|+|..
T Consensus 200 l~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~v~~v~l~dG-----~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 200 YQAEHRAHGV--DLRTGAAMDCIEGDG---------------------TKVTGVRMQDG-----SVIPADIVIVGIGIV 250 (415)
T ss_dssp HHHHHHHTTC--EEEETCCEEEEEESS---------------------SBEEEEEESSS-----CEEECSEEEECSCCE
T ss_pred HHHHHHhCCC--EEEECCEEEEEEecC---------------------CcEEEEEeCCC-----CEEEcCEEEECCCCc
Confidence 9999999999 899999999998753 12235777665 579999999999954
No 190
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.41 E-value=9.4e-07 Score=89.33 Aligned_cols=98 Identities=19% Similarity=0.294 Sum_probs=78.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... . -..++.++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~------------------------------~--~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR------------------------------V--LGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH------------------------------H--HCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh------------------------------h--cCHHHHHH
Confidence 368999999999999999999999999999997653210 0 01467788
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+..++.++ .++++++|.+++.++ ....|++.++ +++.+|.||+|+|..
T Consensus 191 l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~~~~v~~~dg-----~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 191 LRGLLTELGV--QVELGTGVVGFSGEG----------------------QLEQVMASDG-----RSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHTC--EEECSCCEEEEECSS----------------------SCCEEEETTS-----CEEECSEEEECSCEE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEeccC----------------------cEEEEEECCC-----CEEEcCEEEEeeCCe
Confidence 8888888898 899999999998643 2346777776 579999999999964
No 191
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.40 E-value=2.4e-06 Score=88.34 Aligned_cols=101 Identities=20% Similarity=0.296 Sum_probs=81.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++...+ +.+ ..++.+++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l--------------------------------~~~--d~~~~~~l 233 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL--------------------------------RGF--DQQMAELV 233 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS--------------------------------TTS--CHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC--------------------------------ccc--CHHHHHHH
Confidence 68999999999999999999999999999984211 111 25778888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++..+ ++...|++.++.+++..++.+|.||+|+|..
T Consensus 234 ~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 234 AASMEERGI--PFLRKTVPLSVEKQD---------------------DGKLLVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHTTC--CEEETEEEEEEEECT---------------------TSCEEEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHhCCC--EEEeCCEEEEEEEcC---------------------CCcEEEEEecCCCCceeEEEcCEEEECcccc
Confidence 888888899 899999999998754 2346688877655666789999999999954
No 192
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.40 E-value=2.2e-06 Score=88.73 Aligned_cols=103 Identities=19% Similarity=0.250 Sum_probs=78.7
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+.+
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~l 221 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA-------------------------------NL--QDEEMKRYA 221 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT-------------------------------TC--CCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-------------------------------cc--CCHHHHHHH
Confidence 689999999999999999999999999999987642 00 124677777
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccCC
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~ 163 (522)
.+..++. + .+.++++|.+++..+ +...|++.+ .+|+..++.+|.||+|+|.
T Consensus 222 ~~~l~~~-V--~i~~~~~v~~i~~~~----------------------~~v~v~~~~-~~G~~~~i~~D~Vi~a~G~--- 272 (492)
T 3ic9_A 222 EKTFNEE-F--YFDAKARVISTIEKE----------------------DAVEVIYFD-KSGQKTTESFQYVLAATGR--- 272 (492)
T ss_dssp HHHHHTT-S--EEETTCEEEEEEECS----------------------SSEEEEEEC-TTCCEEEEEESEEEECSCC---
T ss_pred HHHHhhC-c--EEEECCEEEEEEEcC----------------------CEEEEEEEe-CCCceEEEECCEEEEeeCC---
Confidence 7776665 6 788999999998754 335566653 1255568999999999994
Q ss_pred CCCCC
Q 009917 164 VPNIP 168 (522)
Q Consensus 164 ~p~~P 168 (522)
.|+..
T Consensus 273 ~p~~~ 277 (492)
T 3ic9_A 273 KANVD 277 (492)
T ss_dssp EESCS
T ss_pred ccCCC
Confidence 45544
No 193
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.39 E-value=2.3e-06 Score=83.13 Aligned_cols=100 Identities=15% Similarity=0.232 Sum_probs=76.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ....+.+.+
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~~~l 190 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-----------------------------------AEKILIKRL 190 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------CCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc-----------------------------------cCHHHHHHH
Confidence 689999999999999999999999999999875421 124566677
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCC-CceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKN-HSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-g~~~~~~~d~lvvAtG~~ 161 (522)
.+.+++.++ .+.++++|.+++.+. +....|++.+..+ |+..++.+|.||+|+|..
T Consensus 191 ~~~l~~~gv--~i~~~~~v~~i~~~~---------------------~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 191 MDKVENGNI--ILHTNRTLEEVTGDQ---------------------MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHTSSE--EEECSCEEEEEEECS---------------------SSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHhcccCCe--EEEcCceeEEEEcCC---------------------CceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 777777888 888999999998653 1223477765333 444679999999999964
No 194
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.39 E-value=1.6e-06 Score=89.78 Aligned_cols=97 Identities=16% Similarity=0.238 Sum_probs=78.3
Q ss_pred CcEEEECCChhHHHHHHHHHhc---CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK---GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~---g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
++|+|||+|+.|+.+|..|.+. |.+|+++++.+.+. +.+ ..++.
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~~~--d~~~~ 238 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-------------------------------RGF--DETIR 238 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-------------------------------TTS--CHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-------------------------------ccc--CHHHH
Confidence 6899999999999999999998 99999999976531 111 14677
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
+.+.+..++.++ .++++++|.+++..+ ++...|++.++ +++.+|.||+|+|.
T Consensus 239 ~~l~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~G-----~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 239 EEVTKQLTANGI--EIMTNENPAKVSLNT---------------------DGSKHVTFESG-----KTLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHHHTTC--EEEESCCEEEEEECT---------------------TSCEEEEETTS-----CEEEESEEEECSCE
T ss_pred HHHHHHHHhCCC--EEEeCCEEEEEEEcC---------------------CceEEEEECCC-----cEEEcCEEEECCCC
Confidence 888888888899 899999999998753 23366777655 47999999999995
Q ss_pred c
Q 009917 161 F 161 (522)
Q Consensus 161 ~ 161 (522)
.
T Consensus 291 ~ 291 (495)
T 2wpf_A 291 I 291 (495)
T ss_dssp E
T ss_pred c
Confidence 4
No 195
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.39 E-value=1.4e-06 Score=90.14 Aligned_cols=97 Identities=15% Similarity=0.173 Sum_probs=78.5
Q ss_pred CcEEEECCChhHHHHHHHHHhc---CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK---GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~---g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (522)
++|+|||+|+.|+.+|..|.+. |.+|+++++.+.+. +.+ ..++.
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~~~--d~~~~ 234 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-------------------------------RGF--DSELR 234 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-------------------------------TTS--CHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-------------------------------ccc--CHHHH
Confidence 6899999999999999999998 99999999986532 111 14677
Q ss_pred HHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 81 ~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
+.+.+.+++.++ .++++++|.+++..+ ++...|++.++ +++.+|.||+|+|.
T Consensus 235 ~~l~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~G-----~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 235 KQLTEQLRANGI--NVRTHENPAKVTKNA---------------------DGTRHVVFESG-----AEADYDVVMLAIGR 286 (490)
T ss_dssp HHHHHHHHHTTE--EEEETCCEEEEEECT---------------------TSCEEEEETTS-----CEEEESEEEECSCE
T ss_pred HHHHHHHHhCCC--EEEeCCEEEEEEEcC---------------------CCEEEEEECCC-----cEEEcCEEEEccCC
Confidence 888888888898 899999999998753 23467777654 47899999999995
Q ss_pred c
Q 009917 161 F 161 (522)
Q Consensus 161 ~ 161 (522)
.
T Consensus 287 ~ 287 (490)
T 1fec_A 287 V 287 (490)
T ss_dssp E
T ss_pred C
Confidence 4
No 196
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.39 E-value=2.2e-06 Score=88.26 Aligned_cols=100 Identities=22% Similarity=0.252 Sum_probs=77.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+++
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~l 221 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-------------------------------PT--LDEDVTNAL 221 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-------------------------------cc--CCHHHHHHH
Confidence 689999999999999999999999999999986532 11 125677888
Q ss_pred HHHH-HhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYA-SHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~-~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+.. ++.++ .+.++++|.+++..+ +...|++.+. +|+.+++.+|.||+|+|..
T Consensus 222 ~~~l~~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~-~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 222 VGALAKNEKM--KFMTSTKVVGGTNNG----------------------DSVSLEVEGK-NGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHTCC--EEECSCEEEEEEECS----------------------SSEEEEEECC----EEEEEESEEEECSCEE
T ss_pred HHHHhhcCCc--EEEeCCEEEEEEEcC----------------------CeEEEEEEcC-CCceEEEECCEEEECCCcc
Confidence 8888 88898 899999999998754 2366766521 1334578999999999954
No 197
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.39 E-value=7.3e-07 Score=91.55 Aligned_cols=100 Identities=22% Similarity=0.275 Sum_probs=77.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|++|+.+|..|++.|.+|+|+|+.+.+. +. -..++.+++
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 218 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-------------------------------PT--YDSELTAPV 218 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999987542 10 125677888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccCC
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~ 163 (522)
.+..++.++ .++++++|++++. + + +++.. .+|+..++.+|.||+|+|..
T Consensus 219 ~~~l~~~gv--~i~~~~~v~~i~~-~----------------------~---v~v~~-~~G~~~~i~~D~vv~a~G~~-- 267 (458)
T 1lvl_A 219 AESLKKLGI--ALHLGHSVEGYEN-G----------------------C---LLAND-GKGGQLRLEADRVLVAVGRR-- 267 (458)
T ss_dssp HHHHHHHTC--EEETTCEEEEEET-T----------------------E---EEEEC-SSSCCCEECCSCEEECCCEE--
T ss_pred HHHHHHCCC--EEEECCEEEEEEe-C----------------------C---EEEEE-CCCceEEEECCEEEECcCCC--
Confidence 888888898 8999999999875 4 1 33332 12434578999999999954
Q ss_pred CCCCC
Q 009917 164 VPNIP 168 (522)
Q Consensus 164 ~p~~P 168 (522)
|+.+
T Consensus 268 -p~~~ 271 (458)
T 1lvl_A 268 -PRTK 271 (458)
T ss_dssp -ECCS
T ss_pred -cCCC
Confidence 5554
No 198
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.38 E-value=2.8e-06 Score=87.96 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=80.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++...+ +.+ ..++.+++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l--------------------------------~~~--d~~~~~~l 231 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL--------------------------------RGF--DQQMSSLV 231 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------TTS--CHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc--------------------------------ccC--CHHHHHHH
Confidence 68999999999999999999999999999985311 111 25778888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++... ++...|++.+..+|+..++.+|.||+|+|..
T Consensus 232 ~~~l~~~gv--~~~~~~~v~~i~~~~---------------------~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 232 TEHMESHGT--QFLKGCVPSHIKKLP---------------------TNQLQVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHTTC--EEEETEEEEEEEECT---------------------TSCEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCCEEEEEEEcC---------------------CCcEEEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 888888898 899999999998753 2446677776544555578999999999954
No 199
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.38 E-value=1.7e-06 Score=87.18 Aligned_cols=98 Identities=21% Similarity=0.304 Sum_probs=78.3
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .. -..++.+++
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~--------------------------~----~~--~~~~~~~~l 190 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM--------------------------A----RV--VTPEISSYF 190 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT--------------------------T----TT--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch--------------------------h----hc--cCHHHHHHH
Confidence 689999999999999999999999999999876531 0 01 125778888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .++++++|.+++..+ +....|++.++ +++.+|.||+|+|..
T Consensus 191 ~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~v~~V~~~dG-----~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 191 HDRHSGAGI--RMHYGVRATEIAAEG---------------------DRVTGVVLSDG-----NTLPCDLVVVGVGVI 240 (404)
T ss_dssp HHHHHHTTC--EEECSCCEEEEEEET---------------------TEEEEEEETTS-----CEEECSEEEECCCEE
T ss_pred HHHHHhCCc--EEEECCEEEEEEecC---------------------CcEEEEEeCCC-----CEEEcCEEEECcCCc
Confidence 888899999 899999999998753 12234666665 579999999999964
No 200
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.38 E-value=2.8e-06 Score=87.66 Aligned_cols=102 Identities=13% Similarity=0.113 Sum_probs=79.3
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~~ 234 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-------------------------------RS--FDSMISTNC 234 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHHH
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999976531 11 125677888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCC-cEEEEEecCCCCce--eEEEeCEEEEeecc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRG-KWTVAVEDAKNHST--EVHQVDFVILCVGR 160 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~g~~--~~~~~d~lvvAtG~ 160 (522)
.+..++.++ .+.++++|.+++... ++ ...|++.+..+++. .++.+|.||+|+|.
T Consensus 235 ~~~l~~~gv--~i~~~~~v~~i~~~~---------------------~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 235 TEELENAGV--EVLKFSQVKEVKKTL---------------------SGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp HHHHHHTTC--EEETTEEEEEEEECS---------------------SSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred HHHHHHCCC--EEEeCCEEEEEEEcC---------------------CCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 888888898 899999999998754 12 24566655333433 67899999999995
Q ss_pred c
Q 009917 161 F 161 (522)
Q Consensus 161 ~ 161 (522)
.
T Consensus 292 ~ 292 (478)
T 3dk9_A 292 V 292 (478)
T ss_dssp E
T ss_pred c
Confidence 4
No 201
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.37 E-value=1.1e-06 Score=90.99 Aligned_cols=101 Identities=22% Similarity=0.203 Sum_probs=78.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|+.|+.+|..|.+.|.+|+++|+.+.+. + . -..++.++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l--------------------------~-----~--~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM--------------------------Q-----G--ADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------T-----T--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--------------------------c-----c--cCHHHHHH
Confidence 3689999999999999999999999999999986531 1 0 12577888
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+..++.++ .+.++++|.+++..+ +...|++.+.. +..+++.+|.||+|+|..
T Consensus 232 l~~~l~~~gV--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~~-~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 232 WQKQNEYRFD--NIMVNTKTVAVEPKE----------------------DGVYVTFEGAN-APKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp HHHHHGGGEE--EEECSCEEEEEEEET----------------------TEEEEEEESSS-CCSSCEEESCEEECCCEE
T ss_pred HHHHHHhcCC--EEEECCEEEEEEEcC----------------------CeEEEEEeccC-CCceEEEcCEEEECcCCC
Confidence 8888888888 899999999998754 23567766511 111457899999999954
No 202
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.36 E-value=2.1e-06 Score=86.72 Aligned_cols=94 Identities=23% Similarity=0.428 Sum_probs=76.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ..+ ..++.++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------~----~~~--~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLM--------------------------S----RAA--PATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------T----TTS--CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc--------------------------c----ccc--CHHHHHH
Confidence 3789999999999999999999999999999986532 0 001 2567788
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+..++.++ .++++++|.+++ + + .|++.++ +++.+|.||+|+|..
T Consensus 193 l~~~l~~~GV--~i~~~~~v~~i~--~----------------------~--~v~~~~g-----~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 193 VARYHAAQGV--DLRFERSVTGSV--D----------------------G--VVLLDDG-----TRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHTTC--EEEESCCEEEEE--T----------------------T--EEEETTS-----CEEECSEEEECSCEE
T ss_pred HHHHHHHcCc--EEEeCCEEEEEE--C----------------------C--EEEECCC-----CEEEcCEEEECcCCC
Confidence 8888888999 899999999998 3 1 4666655 578999999999954
No 203
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.36 E-value=2.3e-06 Score=86.98 Aligned_cols=99 Identities=17% Similarity=0.293 Sum_probs=77.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .. -..++.++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l--------------------------~----~~--~~~~~~~~ 196 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL--------------------------E----RV--TAPPVSAF 196 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT--------------------------T----TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc--------------------------c----ch--hhHHHHHH
Confidence 3689999999999999999999999999999876531 0 00 12567788
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEE--cCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEF--EGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
+.+..++.|+ .+.++++|.+++. .+ +..+.|++.++ +++.+|.||+|+|.
T Consensus 197 l~~~l~~~GV--~i~~~~~v~~i~~~~~~---------------------~~v~~v~~~~G-----~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 197 YEHLHREAGV--DIRTGTQVCGFEMSTDQ---------------------QKVTAVLCEDG-----TRLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHTC--EEECSCCEEEEEECTTT---------------------CCEEEEEETTS-----CEEECSEEEECCCE
T ss_pred HHHHHHhCCe--EEEeCCEEEEEEeccCC---------------------CcEEEEEeCCC-----CEEEcCEEEECCCC
Confidence 8888888898 8999999999986 32 12235666665 57899999999995
Q ss_pred c
Q 009917 161 F 161 (522)
Q Consensus 161 ~ 161 (522)
.
T Consensus 249 ~ 249 (431)
T 1q1r_A 249 I 249 (431)
T ss_dssp E
T ss_pred C
Confidence 4
No 204
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.35 E-value=3.2e-06 Score=86.56 Aligned_cols=100 Identities=21% Similarity=0.339 Sum_probs=78.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ..+ ..++.+.+
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------~----~~~--d~~~~~~l 195 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL--------------------------P----KYF--DKEMVAEV 195 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------T----TTC--CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc--------------------------c----ccC--CHHHHHHH
Confidence 689999999999999999999999999999976531 0 001 15778888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccCC
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~ 163 (522)
.+..++.++ .+.++++|.+++..+ ++..|++.+ + ++.+|.||+|+|.
T Consensus 196 ~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~~v~v~~~~---g---~i~aD~Vv~A~G~--- 242 (452)
T 3oc4_A 196 QKSLEKQAV--IFHFEETVLGIEETA----------------------NGIVLETSE---Q---EISCDSGIFALNL--- 242 (452)
T ss_dssp HHHHHTTTE--EEEETCCEEEEEECS----------------------SCEEEEESS---C---EEEESEEEECSCC---
T ss_pred HHHHHHcCC--EEEeCCEEEEEEccC----------------------CeEEEEECC---C---EEEeCEEEECcCC---
Confidence 888888898 899999999998643 334555532 2 6899999999994
Q ss_pred CCCCC
Q 009917 164 VPNIP 168 (522)
Q Consensus 164 ~p~~P 168 (522)
.|+.+
T Consensus 243 ~p~~~ 247 (452)
T 3oc4_A 243 HPQLA 247 (452)
T ss_dssp BCCCS
T ss_pred CCChH
Confidence 45554
No 205
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.34 E-value=2.3e-06 Score=89.35 Aligned_cols=98 Identities=15% Similarity=0.230 Sum_probs=77.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------LI--KDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------TC--CSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-------------------------------cc--ccHHHHHHH
Confidence 789999999999999999999999999999976531 11 125778888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCc---EEEEEecCCCCceeEEEeCEEEEeecc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGK---WTVAVEDAKNHSTEVHQVDFVILCVGR 160 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~g~~~~~~~d~lvvAtG~ 160 (522)
.+..++.|+ .++++++|++++..+ ++. +.|++.++ + .++.+|.||+|+|.
T Consensus 262 ~~~l~~~GV--~i~~~~~V~~i~~~~---------------------~~~v~~~~v~~~~G---~-~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 262 LDRMKEQGM--EIISGSNVTRIEEDA---------------------NGRVQAVVAMTPNG---E-MRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHTTC--EEESSCEEEEEEECT---------------------TSBEEEEEEEETTE---E-EEEECSCEEECCCC
T ss_pred HHHHHhCCc--EEEECCEEEEEEEcC---------------------CCceEEEEEEECCC---c-EEEEcCEEEECcCC
Confidence 888888999 899999999998753 122 55666543 1 27999999999995
Q ss_pred c
Q 009917 161 F 161 (522)
Q Consensus 161 ~ 161 (522)
.
T Consensus 315 ~ 315 (523)
T 1mo9_A 315 Q 315 (523)
T ss_dssp E
T ss_pred c
Confidence 4
No 206
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.33 E-value=4e-06 Score=86.52 Aligned_cols=99 Identities=27% Similarity=0.308 Sum_probs=79.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+.+
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 227 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL-------------------------------PA--VDEQVAKEA 227 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999976531 11 125677888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .++++++|.+++..+ +...|++.+++ | .+++.+|.||+|+|..
T Consensus 228 ~~~l~~~Gv--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~-g-~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 228 QKILTKQGL--KILLGARVTGTEVKN----------------------KQVTVKFVDAE-G-EKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHTTE--EEEETCEEEEEEECS----------------------SCEEEEEESSS-E-EEEEEESEEEECSCEE
T ss_pred HHHHHhCCC--EEEECCEEEEEEEcC----------------------CEEEEEEEeCC-C-cEEEECCEEEEeeCCc
Confidence 888888888 899999999998754 34667777643 3 4578999999999954
No 207
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.32 E-value=3.2e-07 Score=95.36 Aligned_cols=49 Identities=24% Similarity=0.362 Sum_probs=36.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc-cccceeec
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTMLQ 52 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~-~~~~~~~~ 52 (522)
|+|||||||++||+||..|++.|++|+|+|+++.+||.... ..++..++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D 51 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFD 51 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEe
Confidence 58999999999999999999999999999999999996554 44554443
No 208
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.32 E-value=2.6e-06 Score=88.45 Aligned_cols=96 Identities=13% Similarity=0.167 Sum_probs=77.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ..++.+.+
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~--d~~~~~~l 229 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-------------------------------PYE--DADAALVL 229 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-------------------------------CCS--SHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------ccc--CHHHHHHH
Confidence 689999999999999999999999999999986531 111 24678888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.|+ .++++++|++++..+ +...|+..++ +++.+|.||+|+|..
T Consensus 230 ~~~l~~~GV--~i~~~~~V~~i~~~~----------------------~~v~v~~~~g-----~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 230 EESFAERGV--RLFKNARAASVTRTG----------------------AGVLVTMTDG-----RTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHTTC--EEETTCCEEEEEECS----------------------SSEEEEETTS-----CEEEESEEEECCCEE
T ss_pred HHHHHHCCC--EEEeCCEEEEEEEeC----------------------CEEEEEECCC-----cEEEcCEEEECCCCC
Confidence 888888999 899999999998754 2355554443 578999999999954
No 209
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.32 E-value=9.4e-07 Score=87.87 Aligned_cols=90 Identities=14% Similarity=0.190 Sum_probs=73.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + + ..++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~-~--~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-------------------------------G-L--DEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-------------------------------T-C--CHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-------------------------------c-C--CHHHHHHH
Confidence 689999999999999999999999999999976532 1 1 15778888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++. . .|++.++ + +.+|.||+|+|..
T Consensus 190 ~~~l~~~gV--~i~~~~~v~~i~~-~-------------------------~v~~~~g-----~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 190 KDMLEETGV--KFFLNSELLEANE-E-------------------------GVLTNSG-----F-IEGKVKICAIGIV 233 (367)
T ss_dssp HHHHHHTTE--EEECSCCEEEECS-S-------------------------EEEETTE-----E-EECSCEEEECCEE
T ss_pred HHHHHHCCC--EEEcCCEEEEEEe-e-------------------------EEEECCC-----E-EEcCEEEECcCCC
Confidence 888888898 8999999998862 1 3666543 4 8999999999954
No 210
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.30 E-value=3.5e-06 Score=86.93 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=77.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ..++.+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~--d~~~~~~l 232 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-------------------------------RKF--DECIQNTI 232 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TTS--CHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-------------------------------ccc--CHHHHHHH
Confidence 689999999999999999999999999999976531 111 15677888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCC-cEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRG-KWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|++++..+ ++ ...|++.++ + +++.+|.||+|+|..
T Consensus 233 ~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~~v~~~~G---~-~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 233 TDHYVKEGI--NVHKLSKIVKVEKNV---------------------ETDKLKIHMNDS---K-SIDDVDELIWTIGRK 284 (479)
T ss_dssp HHHHHHHTC--EEECSCCEEEEEECC----------------------CCCEEEEETTS---C-EEEEESEEEECSCEE
T ss_pred HHHHHhCCe--EEEeCCEEEEEEEcC---------------------CCcEEEEEECCC---c-EEEEcCEEEECCCCC
Confidence 888888898 899999999998753 11 245666543 2 478999999999954
No 211
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.30 E-value=1.1e-06 Score=91.63 Aligned_cols=41 Identities=27% Similarity=0.365 Sum_probs=37.6
Q ss_pred CcEEEECCChhHHHHHHHHHh-cCCceEEEecCCCccccccc
Q 009917 4 KQIAIVGAGVSGLLACKYLLL-KGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~-~g~~v~i~e~~~~~Gg~w~~ 44 (522)
.||+|||||++||+||..|++ .|++|+|+|+++.+||....
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T 52 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAST 52 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCE
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeee
Confidence 589999999999999999988 59999999999999997653
No 212
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.30 E-value=4.2e-06 Score=86.20 Aligned_cols=97 Identities=27% Similarity=0.309 Sum_probs=78.6
Q ss_pred CcEEEECCChhHHHHHHHHHhc-CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~-g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
++|+|||+|+.|+.+|..|.+. |.+|+++++.+.+. + ..+ ..++.+.
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l--------------------------~----~~~--~~~~~~~ 207 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM--------------------------P----GFT--SKSLSQM 207 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS--------------------------T----TTS--CHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc--------------------------c----ccc--CHHHHHH
Confidence 6899999999999999999999 99999999976531 0 011 2577888
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+..++.++ .+.++++|.+++..+ +...|.+.++ +++.+|.||+|+|..
T Consensus 208 l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~~v~v~~~~g-----~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 208 LRHDLEKNDV--VVHTGEKVVRLEGEN----------------------GKVARVITDK-----RTLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEESS----------------------SBEEEEEESS-----CEEECSEEEECSCEE
T ss_pred HHHHHHhcCC--EEEeCCEEEEEEccC----------------------CeEEEEEeCC-----CEEEcCEEEECCCCC
Confidence 8888888998 899999999998743 3456777665 479999999999954
No 213
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.29 E-value=4.7e-06 Score=81.51 Aligned_cols=99 Identities=17% Similarity=0.139 Sum_probs=76.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|..|+.+|..|.+.|.+|+++++.+.+. ...+..+.+
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------------------------------~~~~~~~~l 197 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------------------------------AHEASVKEL 197 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------------------------------SCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------------------------------ccHHHHHHH
Confidence 689999999999999999999999999999875421 113456677
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++.++ +...|++.+..+|+..++.+|.||+|+|..
T Consensus 198 ~~~l~~~gv--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 198 MKAHEEGRL--EVLTPYELRRVEGDE----------------------RVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHTTSS--EEETTEEEEEEEESS----------------------SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HhccccCCe--EEecCCcceeEccCC----------------------CeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 777777788 889999999998742 223566664323555679999999999964
No 214
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.29 E-value=3.7e-06 Score=86.93 Aligned_cols=96 Identities=19% Similarity=0.270 Sum_probs=78.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ..++.+.+
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~~~--~~~~~~~l 238 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-------------------------------RNF--DYDLRQLL 238 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TTS--CHHHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-------------------------------ccc--CHHHHHHH
Confidence 689999999999999999999999999999976531 111 15677888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+.+++.++ .+.++++|.+++..+ +.+.|++.++ +++.+|.||+|+|..
T Consensus 239 ~~~l~~~Gv--~i~~~~~V~~i~~~~----------------------~~v~v~~~~g-----~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 239 NDAMVAKGI--SIIYEATVSQVQSTE----------------------NCYNVVLTNG-----QTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHTC--EEESSCCEEEEEECS----------------------SSEEEEETTS-----CEEEESEEEECCCEE
T ss_pred HHHHHHCCC--EEEeCCEEEEEEeeC----------------------CEEEEEECCC-----cEEEcCEEEEeeCCC
Confidence 888888898 899999999998754 3467777665 579999999999954
No 215
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.29 E-value=3.7e-06 Score=86.53 Aligned_cols=94 Identities=11% Similarity=0.145 Sum_probs=76.3
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + + ..++.+.+
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~-~--~~~~~~~l 222 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------R-E--DPAIGEAV 222 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T-S--CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------------------------------C-C--CHHHHHHH
Confidence 689999999999999999999999999999976531 1 1 15678888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .++++++|.+++..+ +.+.|++. + .++.+|.||+|+|..
T Consensus 223 ~~~l~~~Gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~-~-----~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 223 TAAFRAEGI--EVLEHTQASQVAHMD----------------------GEFVLTTT-H-----GELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHTTC--EEETTCCEEEEEEET----------------------TEEEEEET-T-----EEEEESEEEECSCEE
T ss_pred HHHHHhCCC--EEEcCCEEEEEEEeC----------------------CEEEEEEC-C-----cEEEcCEEEECCCCC
Confidence 888888898 899999999998754 33556553 2 478999999999964
No 216
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.28 E-value=2.9e-06 Score=87.86 Aligned_cols=97 Identities=22% Similarity=0.279 Sum_probs=75.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .. -..++.++
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------~----~~--~~~~~~~~ 241 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL--------------------------A----GY--YDRDLTDL 241 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT--------------------------T----TT--SCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh--------------------------h----hH--HHHHHHHH
Confidence 3689999999999999999999999999999976531 0 01 12577888
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+..++.++ .+.++++|++++.++ ....|.+ ++ .++.+|.||+|+|..
T Consensus 242 l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~v~~v~~-~g-----~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 242 MAKNMEEHGI--QLAFGETVKEVAGNG----------------------KVEKIIT-DK-----NEYDVDMVILAVGFR 290 (490)
T ss_dssp HHHHHHTTTC--EEEETCCEEEEECSS----------------------SCCEEEE-SS-----CEEECSEEEECCCEE
T ss_pred HHHHHHhCCe--EEEeCCEEEEEEcCC----------------------cEEEEEE-CC-----cEEECCEEEECCCCC
Confidence 8888888898 899999999998532 1123444 33 478999999999954
No 217
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.28 E-value=3.4e-06 Score=86.37 Aligned_cols=96 Identities=18% Similarity=0.273 Sum_probs=74.7
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ..+ ..++.+++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------~----~~~--~~~~~~~l 197 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL--------------------------Y----KYF--DKEFTDIL 197 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT--------------------------T----TTS--CHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh--------------------------h----hhh--hhhHHHHH
Confidence 689999999999999999999999999999976531 0 011 25678888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEE-EEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT-VAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .++++++|.+++..+ ++.. |.+ ++ +++.+|.||+|+|..
T Consensus 198 ~~~l~~~Gv--~i~~~~~v~~i~~~~----------------------~~v~~v~~-~g-----~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 198 AKDYEAHGV--NLVLGSKVAAFEEVD----------------------DEIITKTL-DG-----KEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHTTC--EEEESSCEEEEEEET----------------------TEEEEEET-TS-----CEEEESEEEECCCEE
T ss_pred HHHHHHCCC--EEEcCCeeEEEEcCC----------------------CeEEEEEe-CC-----CEEECCEEEECcCCC
Confidence 888888999 899999999998633 2222 322 32 578999999999954
No 218
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.27 E-value=3.6e-06 Score=87.71 Aligned_cols=101 Identities=17% Similarity=0.124 Sum_probs=80.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
+++++|||||+.|+..|..+.+.|.+|+|+++...+ +. -..++.+.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L--------------------------------~~--~D~ei~~~ 268 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL--------------------------------RG--FDQQCAVK 268 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS--------------------------------TT--SCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc--------------------------------cc--cchhHHHH
Confidence 378999999999999999999999999999875321 11 12678888
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccC
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s 162 (522)
+....++.++ .+++++.|..++..+ +...|.+.++ .++.+|.|++|+|
T Consensus 269 l~~~l~~~gi--~~~~~~~v~~~~~~~----------------------~~~~v~~~~~-----~~~~~D~vLvAvG--- 316 (542)
T 4b1b_A 269 VKLYMEEQGV--MFKNGILPKKLTKMD----------------------DKILVEFSDK-----TSELYDTVLYAIG--- 316 (542)
T ss_dssp HHHHHHHTTC--EEEETCCEEEEEEET----------------------TEEEEEETTS-----CEEEESEEEECSC---
T ss_pred HHHHHHhhcc--eeecceEEEEEEecC----------------------CeEEEEEcCC-----CeEEEEEEEEccc---
Confidence 8888899998 899999999998865 3455666555 4678999999999
Q ss_pred CCCCCCC
Q 009917 163 DVPNIPE 169 (522)
Q Consensus 163 ~~p~~P~ 169 (522)
..|+...
T Consensus 317 R~Pnt~~ 323 (542)
T 4b1b_A 317 RKGDIDG 323 (542)
T ss_dssp EEESCGG
T ss_pred ccCCccc
Confidence 4566643
No 219
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.26 E-value=2.2e-06 Score=88.57 Aligned_cols=96 Identities=22% Similarity=0.283 Sum_probs=75.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|++|+.+|..|.+.|.+|+++++.+.+.. . -..++.++
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~ 232 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT-------------------------------I--YDGDMAEY 232 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-------------------------------S--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-------------------------------c--CCHHHHHH
Confidence 47899999999999999999999999999998765320 0 12567788
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+.+++.++ .+.++++|++++.++ +.+.+.+ ++ .++.+|.||+|+|..
T Consensus 233 l~~~l~~~Gv--~i~~~~~v~~i~~~~----------------------~v~~v~~-~~-----~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 233 IYKEADKHHI--EILTNENVKAFKGNE----------------------RVEAVET-DK-----GTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEESS----------------------BEEEEEE-TT-----EEEECSEEEECSCEE
T ss_pred HHHHHHHcCc--EEEcCCEEEEEEcCC----------------------cEEEEEE-CC-----CEEEcCEEEECcCCC
Confidence 8888888998 899999999998643 2233443 22 478999999999964
No 220
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.26 E-value=3e-06 Score=86.27 Aligned_cols=92 Identities=20% Similarity=0.343 Sum_probs=74.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ..++.+.+
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll-------------------------------~~~--d~~~~~~~ 194 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN-------------------------------KLM--DADMNQPI 194 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS-------------------------------TTS--CGGGGHHH
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccc-------------------------------ccc--cchhHHHH
Confidence 589999999999999999999999999999987542 111 14566777
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .++++++|.+++.. .|++.++ +++.+|.||+|+|..
T Consensus 195 ~~~l~~~gV--~i~~~~~v~~~~~~--------------------------~v~~~~g-----~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 195 LDELDKREI--PYRLNEEINAINGN--------------------------EITFKSG-----KVEHYDMIIEGVGTH 239 (437)
T ss_dssp HHHHHHTTC--CEEESCCEEEEETT--------------------------EEEETTS-----CEEECSEEEECCCEE
T ss_pred HHHhhccce--EEEeccEEEEecCC--------------------------eeeecCC-----eEEeeeeEEEEecee
Confidence 888888898 89999999887643 3677666 578999999999953
No 221
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.26 E-value=9.4e-07 Score=89.73 Aligned_cols=42 Identities=36% Similarity=0.562 Sum_probs=39.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhcC-CceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g-~~v~i~e~~~~~Gg~w~~ 44 (522)
+++|+|||||++||++|..|++.| .+|+|+|+++.+||.+..
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t 48 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHS 48 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccc
Confidence 579999999999999999999999 899999999999997765
No 222
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.25 E-value=5.6e-06 Score=87.34 Aligned_cols=114 Identities=14% Similarity=0.271 Sum_probs=78.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+++
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 198 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-------------------------------TP--VDREMAGFA 198 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC-------------------------------TT--SCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc-------------------------------hh--cCHHHHHHH
Confidence 589999999999999999999999999999976531 11 125677888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCC-CCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFG-SRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++...... . .....+...... .++...+.+.++ +++.+|.||+|+|..
T Consensus 199 ~~~l~~~GV--~i~~~~~v~~i~~~~~~~--~--~~~~~~~~~~~~~~~~~~~v~~~~g-----~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 199 HQAIRDQGV--DLRLGTALSEVSYQVQTH--V--ASDAAGEDTAHQHIKGHLSLTLSNG-----ELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHTTC--EEEETCCEEEEEEECCCC--C--CCGGGTCCCTTCCTTCEEEEEETTS-----CEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCCeEEEEecccccc--c--cccccccccccccCCCcEEEEEcCC-----CEEEcCEEEECcCCc
Confidence 888888898 899999999998731000 0 000000000000 123455666544 479999999999954
No 223
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.25 E-value=5.7e-06 Score=88.43 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=31.6
Q ss_pred CcEEEECCChhHHHHHHHHH---h-cCCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLL---L-KGFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~---~-~g~~v~i~e~~~~ 37 (522)
.||+|||||++||++|..|+ + .|.+|+|+|+.+.
T Consensus 23 ~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 23 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred CCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 69999999999999999999 6 8999999999864
No 224
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.25 E-value=2.1e-06 Score=87.32 Aligned_cols=106 Identities=13% Similarity=0.037 Sum_probs=71.8
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhh
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLS 283 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 283 (522)
|+|+|||+|..|+.+|..|++...+ .+||++.+++.+..... -
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~-~~VtlI~~~~~~~~~p~-------l----------------------------- 45 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPD-LKITLISDRPYFGFTPA-------F----------------------------- 45 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTT-CEEEEECSSSEEECGGG-------H-----------------------------
T ss_pred CcEEEECCCHHHHHHHHHHhccCcC-CeEEEEcCCCCCccCcc-------H-----------------------------
Confidence 7899999999999999999987654 56999999876432110 0
Q ss_pred hhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecCceeEecC--cEEEcCCCc
Q 009917 284 PLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQDFSFCED--GIVVDGQTT 361 (522)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~i~~~~~~--gv~~~dG~~ 361 (522)
.+... .. +.++ .+...+.+.+++.+|+++.+.+++++.+ .|++++|++
T Consensus 46 --~~v~~--------g~-------~~~~-------------~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~ 95 (430)
T 3hyw_A 46 --PHLAM--------GW-------RKFE-------------DISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKK 95 (430)
T ss_dssp --HHHHH--------TC-------SCGG-------------GSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCE
T ss_pred --HHHhc--------CC-------CCHH-------------HhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCE
Confidence 00000 00 0000 0111122345566899998888888754 599999998
Q ss_pred eecccEEEEecCCCCC
Q 009917 362 PLKTDLVILATGFKGD 377 (522)
Q Consensus 362 ~~~~D~VI~aTG~~~~ 377 (522)
+++|.+|+|||-++.
T Consensus 96 -i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 96 -IEYDYLVIATGPKLV 110 (430)
T ss_dssp -EECSEEEECCCCEEE
T ss_pred -EECCEEEEeCCCCcc
Confidence 999999999997643
No 225
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.25 E-value=3.2e-06 Score=90.16 Aligned_cols=34 Identities=15% Similarity=0.083 Sum_probs=31.7
Q ss_pred CcEEEECCChhHHHHHHHHHhc------CCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK------GFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~------g~~v~i~e~~~~ 37 (522)
.||+|||||.|||+||..|++. |.+|+|+|+...
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 6999999999999999999997 999999999754
No 226
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.24 E-value=6.6e-07 Score=93.40 Aligned_cols=51 Identities=35% Similarity=0.539 Sum_probs=42.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcC-CceEEEecCCCccccccc-c-ccceeecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARSDIGGAWIK-T-VETTMLQT 53 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g-~~v~i~e~~~~~Gg~w~~-~-~~~~~~~~ 53 (522)
.++|+|||||++||+||..|.+.| ++|+|+|+++.+||.+.. . ..+..++.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~ 61 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDI 61 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEec
Confidence 478999999999999999999999 999999999999997765 2 24444443
No 227
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.22 E-value=5.5e-06 Score=85.74 Aligned_cols=97 Identities=19% Similarity=0.199 Sum_probs=75.2
Q ss_pred CcEEEECCChhHHHHHHHHHh----cCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLL----KGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQV 79 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~----~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (522)
++|+|||+|+.|+.+|..|.+ .|.+|+++++.+.+. ...++ .++
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~------------------------------~~~l~--~~~ 228 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM------------------------------GKILP--EYL 228 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT------------------------------TTTSC--HHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc------------------------------cccCC--HHH
Confidence 689999999999999999987 478999998865321 11111 467
Q ss_pred HHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeec
Q 009917 80 LDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVG 159 (522)
Q Consensus 80 ~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG 159 (522)
.+++.+..++.++ .++++++|.+++..+ +...|++.++ +++.+|.||+|+|
T Consensus 229 ~~~~~~~l~~~GV--~v~~~~~V~~i~~~~----------------------~~~~v~l~dG-----~~i~aD~Vv~a~G 279 (493)
T 1m6i_A 229 SNWTMEKVRREGV--KVMPNAIVQSVGVSS----------------------GKLLIKLKDG-----RKVETDHIVAAVG 279 (493)
T ss_dssp HHHHHHHHHTTTC--EEECSCCEEEEEEET----------------------TEEEEEETTS-----CEEEESEEEECCC
T ss_pred HHHHHHHHHhcCC--EEEeCCEEEEEEecC----------------------CeEEEEECCC-----CEEECCEEEECCC
Confidence 7788888888898 899999999998643 2345666665 5799999999999
Q ss_pred cc
Q 009917 160 RF 161 (522)
Q Consensus 160 ~~ 161 (522)
..
T Consensus 280 ~~ 281 (493)
T 1m6i_A 280 LE 281 (493)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 228
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.21 E-value=9.7e-07 Score=88.31 Aligned_cols=44 Identities=39% Similarity=0.579 Sum_probs=41.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
|++++|+|||||++|+++|..|.+.|.+|+|||+++.+||.|..
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 77789999999999999999999999999999999999999876
No 229
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.21 E-value=6.4e-06 Score=84.63 Aligned_cols=97 Identities=15% Similarity=0.245 Sum_probs=77.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+ ..++.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-------------------------------~~~--~~~~~~~ 216 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-------------------------------SRF--DQDMRRG 216 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TTS--CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------ccc--CHHHHHH
Confidence 3689999999999999999999999999999976531 111 2567888
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEE-EecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA-VEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+.+++.++ .+.++++|.+++..+ ++...|+ +.++ + +.+|.||+|+|..
T Consensus 217 l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~g-----~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 217 LHAAMEEKGI--RILCEDIIQSVSADA---------------------DGRRVATTMKHG-----E-IVADQVMLALGRM 267 (463)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEECT---------------------TSCEEEEESSSC-----E-EEESEEEECSCEE
T ss_pred HHHHHHHCCC--EEECCCEEEEEEEcC---------------------CCEEEEEEcCCC-----e-EEeCEEEEeeCcc
Confidence 8888888898 899999999998754 2334565 4443 4 8999999999954
No 230
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.21 E-value=1.2e-05 Score=83.81 Aligned_cols=104 Identities=15% Similarity=0.182 Sum_probs=76.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++. .+. +.+ ..++.+++
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l-------------------------------~~~--d~~~~~~~ 256 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILL-------------------------------RGF--DQDMANKI 256 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS-------------------------------TTS--CHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccc-------------------------------ccC--CHHHHHHH
Confidence 57999999999999999999999999999984 221 111 25788888
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++..... ..+...|++...+.++..++.+|.||+|+|..
T Consensus 257 ~~~l~~~GV--~v~~~~~v~~v~~~~~~------------------~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 257 GEHMEEHGI--KFIRQFVPIKVEQIEAG------------------TPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp HHHHHHTTC--EEEESEEEEEEEEEECC------------------TTCEEEEEEEESSSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCCeEEEEEEccCC------------------CCceEEEEEEECCCcEEEEEECCEEEEecCCc
Confidence 888888898 89999888888765300 01335566554332344568899999999954
No 231
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.19 E-value=2e-06 Score=86.70 Aligned_cols=108 Identities=18% Similarity=0.150 Sum_probs=70.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhh
Q 009917 202 KGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATM 281 (522)
Q Consensus 202 ~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 281 (522)
.||||+|||+|..|+-+|..|++.+.. .+|+++.+++.+..... ...
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~-~~Vtlie~~~~~~~~p~-------~~~------------------------- 47 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPS-IEVTLIEPNETYYTCYM-------SNE------------------------- 47 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTT-SEEEEECSCSSEECSTT-------HHH-------------------------
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcC-CeEEEEeCCCCCCCccC-------HHH-------------------------
Confidence 489999999999999999999887653 46999998776432210 000
Q ss_pred hhhhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecCceeEecC--cEEEcCC
Q 009917 282 LSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQDFSFCED--GIVVDGQ 359 (522)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~i~~~~~~--gv~~~dG 359 (522)
. +....+ ++ . +... ++.+.+.+|+++.+.+..++.+ .|++.+|
T Consensus 48 ------v--------~~g~~~-------~~--------~-----~~~~-~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g 92 (401)
T 3vrd_B 48 ------V--------IGGDRE-------LA--------S-----LRVG-YDGLRAHGIQVVHDSALGIDPDKKLVKTAGG 92 (401)
T ss_dssp ------H--------HHTSSC-------GG--------G-----GEEC-SHHHHHTTCEEECSCEEEEETTTTEEEETTS
T ss_pred ------H--------hcCCCC-------HH--------H-----HhhC-HHHHHHCCCEEEEeEEEEEEccCcEEEeccc
Confidence 0 000000 00 0 0000 1223344688888888888754 4888999
Q ss_pred CceecccEEEEecCCCCCc
Q 009917 360 TTPLKTDLVILATGFKGDV 378 (522)
Q Consensus 360 ~~~~~~D~VI~aTG~~~~~ 378 (522)
.+ +.+|.+|+|||.+++.
T Consensus 93 ~~-i~yd~LviAtG~~~~~ 110 (401)
T 3vrd_B 93 AE-FAYDRCVVAPGIDLLY 110 (401)
T ss_dssp CE-EECSEEEECCCEEECG
T ss_pred ce-eecceeeeccCCcccc
Confidence 88 9999999999998764
No 232
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.18 E-value=1e-05 Score=79.13 Aligned_cols=97 Identities=13% Similarity=0.214 Sum_probs=73.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|++|+.+|..|.+.|.+|+++++.+.+. .... +.
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~-----------------------------------~~~~---~~ 215 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR-----------------------------------ASTI---MQ 215 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCHH---HH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC-----------------------------------CCHH---HH
Confidence 689999999999999999999999999999875421 0122 22
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+.+..++ .+.++++|.+++.++ ++...|++.+..+++..++.+|.||+|+|..
T Consensus 216 ~~l~~~~gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 216 KRAEKNEKI--EILYNTVALEAKGDG---------------------KLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp HHHHHCTTE--EEECSEEEEEEEESS---------------------SSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred HHHHhcCCe--EEeecceeEEEEccc---------------------CcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 333344477 788899999998754 1234477777555666789999999999964
No 233
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.16 E-value=1.5e-06 Score=88.98 Aligned_cols=42 Identities=14% Similarity=0.352 Sum_probs=39.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
.+||+|||||++||++|..|++.|++|+|+|+++.+||.+..
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 479999999999999999999999999999999999998765
No 234
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.16 E-value=1.5e-06 Score=87.53 Aligned_cols=42 Identities=26% Similarity=0.422 Sum_probs=40.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhc-CCceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~-g~~v~i~e~~~~~Gg~w~~ 44 (522)
.+||+|||||++||++|..|.+. |.+|+|+|+++.+||.+..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 57999999999999999999998 9999999999999999876
No 235
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.14 E-value=1.8e-06 Score=88.98 Aligned_cols=50 Identities=28% Similarity=0.413 Sum_probs=43.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcC--CceEEEecCCCccccccc-ccccee
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARSDIGGAWIK-TVETTM 50 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g--~~v~i~e~~~~~Gg~w~~-~~~~~~ 50 (522)
|.++||+|||||++||++|..|.+.| .+|+|+|+++.+||.+.. ...+..
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~ 54 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFT 54 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCC
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEE
Confidence 66789999999999999999999999 999999999999997665 334433
No 236
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.14 E-value=1.7e-05 Score=76.50 Aligned_cols=96 Identities=17% Similarity=0.198 Sum_probs=70.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|++|+.+|..|.+.+.+|+++++.+.+. ....+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~---- 185 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------------------------------ADQVL---- 185 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-----------------------------------SCHHH----
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-----------------------------------ccHHH----
Confidence 689999999999999999999999999999875420 00222
Q ss_pred HHHHHh-cCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASH-FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+...+ .++ .+.++++|+++..++ +....|++.+..+|+..++.+|.||+|+|..
T Consensus 186 ~~~l~~~~gv--~v~~~~~v~~i~~~~---------------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 186 QDKLRSLKNV--DIILNAQTTEVKGDG---------------------SKVVGLEYRDRVSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp HHHHHTCTTE--EEESSEEEEEEEESS---------------------SSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHhhCCCe--EEecCCceEEEEcCC---------------------CcEEEEEEEECCCCcEEEEEcCEEEEeeCCc
Confidence 222333 567 788899999998653 1112567766444666789999999999954
No 237
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.14 E-value=2.6e-06 Score=85.06 Aligned_cols=42 Identities=29% Similarity=0.430 Sum_probs=39.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
.+||+|||||++|+++|..|++.|.+|+|+|+++.+||.|..
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 368999999999999999999999999999999999999886
No 238
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.14 E-value=7.3e-06 Score=79.86 Aligned_cols=96 Identities=14% Similarity=0.163 Sum_probs=69.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ....+ .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~---~ 194 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR-----------------------------------ANKVA---Q 194 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC-----------------------------------SCHHH---H
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC-----------------------------------cchHH---H
Confidence 689999999999999999999999999999875421 01222 2
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+.++.++ .+.++++|+++..++ ....|.+.+..+|+..++.+|.||+|+|..
T Consensus 195 ~~l~~~~gv--~i~~~~~v~~i~~~~----------------------~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 195 ARAFANPKM--KFIWDTAVEEIQGAD----------------------SVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp HHHHTCTTE--EEECSEEEEEEEESS----------------------SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHhcCCc--eEecCCceEEEccCC----------------------cEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 333344567 788899999998643 223567664333555679999999999954
No 239
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.13 E-value=8.2e-06 Score=80.76 Aligned_cols=99 Identities=16% Similarity=0.162 Sum_probs=73.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|.+|+.+|..|.+.|.+|+++++.+.+. ...++.+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~~~~l 208 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ-----------------------------------GHGKTAHEV 208 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS-----------------------------------SCSHHHHSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC-----------------------------------CCHHHHHHH
Confidence 689999999999999999999999999999875421 012344556
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.++ .+.++++|.+++..+ +....|++.. .+|+..++.+|.||+|+|..
T Consensus 209 ~~~~~~~gv--~i~~~~~v~~i~~~~---------------------~~v~~v~~~~-~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 209 ERARANGTI--DVYLETEVASIEESN---------------------GVLTRVHLRS-SDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHHHHTSE--EEESSEEEEEEEEET---------------------TEEEEEEEEE-TTCCEEEEECSEEEECCCBC
T ss_pred HHHhhcCce--EEEcCcCHHHhccCC---------------------CceEEEEEEe-cCCCeEEEeCCEEEECCCCC
Confidence 666666777 888999999998753 1112455552 22445679999999999954
No 240
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.13 E-value=1.5e-06 Score=89.05 Aligned_cols=42 Identities=43% Similarity=0.597 Sum_probs=39.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
++||+|||||++||++|..|++.|++|+|+|+++.+||.+..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 46 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWT 46 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceec
Confidence 479999999999999999999999999999999999998765
No 241
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.12 E-value=2.7e-05 Score=82.71 Aligned_cols=40 Identities=25% Similarity=0.339 Sum_probs=37.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAW 42 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w 42 (522)
.+||+|||||++|+++|..|++.|++|+|+|+.+..||.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 4699999999999999999999999999999998888755
No 242
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.11 E-value=7.9e-06 Score=79.00 Aligned_cols=97 Identities=13% Similarity=0.133 Sum_probs=69.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++++.+. ...++ .
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~---~ 185 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-----------------------------------CAPIT---L 185 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-----------------------------------SCHHH---H
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-----------------------------------CCHHH---H
Confidence 689999999999999999999999999999875421 01222 2
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+.++.++ .+.++++|.+++..+ ++...|++.+..+|+..++.+|.||+|+|..
T Consensus 186 ~~l~~~~gv--~v~~~~~v~~i~~~~---------------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 186 EHAKNNDKI--EFLTPYVVEEIKGDA---------------------SGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp HHHHTCTTE--EEETTEEEEEEEEET---------------------TEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHhhCCCe--EEEeCCEEEEEECCC---------------------CcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 223334566 788889999998653 1223466664223555679999999999954
No 243
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.11 E-value=3.4e-06 Score=87.08 Aligned_cols=51 Identities=25% Similarity=0.249 Sum_probs=44.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcC-CceEEEecCCCccccccc--cccceeecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARSDIGGAWIK--TVETTMLQT 53 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g-~~v~i~e~~~~~Gg~w~~--~~~~~~~~~ 53 (522)
.++|+|||||++||++|..|.+.| .+|+|+|+++.+||.|.. .+++..++.
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~ 62 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDL 62 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEES
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEee
Confidence 479999999999999999999998 799999999999999886 455555443
No 244
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.10 E-value=1e-05 Score=85.80 Aligned_cols=95 Identities=20% Similarity=0.368 Sum_probs=76.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. -..++.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 233 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM-------------------------------PP--IDYEMAAY 233 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------------------------cc--CCHHHHHH
Confidence 3689999999999999999999999999999876532 11 12567788
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+..++.++ .+.++++|.+++... + .|++.++ +++.+|.||+|+|..
T Consensus 234 l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~--~v~~~~g-----~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 234 VHEHMKNHDV--ELVFEDGVDALEENG----------------------A--VVRLKSG-----SVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEGGG----------------------T--EEEETTS-----CEEECSEEEECSCEE
T ss_pred HHHHHHHcCC--EEEECCeEEEEecCC----------------------C--EEEECCC-----CEEEcCEEEEccCCC
Confidence 8888888898 899999999997643 1 3666655 578999999999954
No 245
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.10 E-value=9.7e-06 Score=79.18 Aligned_cols=99 Identities=17% Similarity=0.206 Sum_probs=70.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|..|+.+|..|.+.|.+|+++++++.+. ....+ .
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~---~ 201 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-----------------------------------ASKIM---Q 201 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCHHH---H
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC-----------------------------------ccHHH---H
Confidence 689999999999999999999999999999875421 01122 1
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+++.++.++ .+.++++|.+++.+. + ......|.+.+..+|+..++.+|.||+|+|..
T Consensus 202 ~~~~~~~gv--~i~~~~~v~~i~~~~--~-----------------~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 202 QRALSNPKI--DVIWNSSVVEAYGDG--E-----------------RDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp HHHHTCTTE--EEECSEEEEEEEESS--S-----------------SSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHhCCCe--eEecCCceEEEeCCC--C-----------------ccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 233455677 788899999998653 0 00112466665434555789999999999954
No 246
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.08 E-value=1.4e-05 Score=77.43 Aligned_cols=97 Identities=19% Similarity=0.198 Sum_probs=73.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ... .+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~~---~~ 195 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-----------------------------------AQP---IY 195 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC-----------------------------------SCH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC-----------------------------------cCH---HH
Confidence 3689999999999999999999999999999876431 012 23
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
++.+.++.++ .+.++++|.+++.++ +...|++.+..+|+..++.+|.||+|+|..
T Consensus 196 ~~~~~~~~gv--~~~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 196 VETVKKKPNV--EFVLNSVVKEIKGDK----------------------VVKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp HHHHHTCTTE--EEECSEEEEEEEESS----------------------SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHhCCCc--EEEeCCEEEEEeccC----------------------ceeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 4444555577 788899999998653 234577776444555689999999999964
No 247
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.07 E-value=3.2e-06 Score=87.84 Aligned_cols=49 Identities=37% Similarity=0.591 Sum_probs=42.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc-cccceee
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTML 51 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~-~~~~~~~ 51 (522)
.++|+|||||++||++|..|.+.|++|+|+|+++.+||.+.. ..++..+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~ 62 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIW 62 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEE
Confidence 378999999999999999999999999999999999998765 3444433
No 248
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.06 E-value=1.9e-05 Score=76.70 Aligned_cols=96 Identities=19% Similarity=0.181 Sum_probs=69.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ....+.+.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-----------------------------------~~~~l~~~- 199 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-----------------------------------CENAYVQE- 199 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-----------------------------------SCHHHHHH-
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-----------------------------------CCHHHHHH-
Confidence 689999999999999999999999999999865421 01233333
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+.++ .+.++++|++++.++ ...-.|.+.+..+|+..++.+|.||+|+|..
T Consensus 200 ---l~~~gv--~i~~~~~v~~i~~~~---------------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 200 ---IKKRNI--PYIMNAQVTEIVGDG---------------------KKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp ---HHHTTC--CEECSEEEEEEEESS---------------------SSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred ---HhcCCc--EEEcCCeEEEEecCC---------------------ceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 335677 889999999998653 1123466654223555679999999999954
No 249
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.05 E-value=1.4e-05 Score=79.15 Aligned_cols=104 Identities=15% Similarity=0.229 Sum_probs=70.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|.+|+.+|..|.+.|.+|+++++.+.+... . + .+...-...+.+++
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~------~----------------~----d~~~~~~~~~~~~l 220 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP------D----------------A----DPSVRLSPYTRQRL 220 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHHH
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC------C----------------C----CCCccCCHHHHHHH
Confidence 58999999999999999999999999999997653100 0 0 01111114556777
Q ss_pred HHHHHhcC-CccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFD-LRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~-l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++.+ + .+.++++|.+++..+ +...|++.++. ....+|.||+|+|..
T Consensus 221 ~~~l~~~g~v--~~~~~~~v~~i~~~~----------------------~~~~v~~~~g~----~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 221 GNVIKQGARI--EMNVHYTVKDIDFNN----------------------GQYHISFDSGQ----SVHTPHEPILATGFD 271 (369)
T ss_dssp HHHHHTTCCE--EEECSCCEEEEEEET----------------------TEEEEEESSSC----CEEESSCCEECCCBC
T ss_pred HHHHhhCCcE--EEecCcEEEEEEecC----------------------CceEEEecCCe----EeccCCceEEeeccC
Confidence 77777775 7 788899999997643 33567776652 233469999999953
No 250
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.05 E-value=2.6e-06 Score=87.89 Aligned_cols=41 Identities=24% Similarity=0.414 Sum_probs=38.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC--ceEEEecCCCccccccc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIK 44 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~~~Gg~w~~ 44 (522)
+||+|||||++||++|..|++.|. +|+|+|+++.+||....
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t 45 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRS 45 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEE
Confidence 799999999999999999999999 99999999999997654
No 251
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.05 E-value=3.1e-06 Score=87.59 Aligned_cols=42 Identities=29% Similarity=0.473 Sum_probs=38.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
+++|+|||||++||++|..|.+.|++|+|||+++.+||.+..
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~ 52 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWT 52 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceee
Confidence 479999999999999999999999999999999999996544
No 252
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.04 E-value=2.2e-05 Score=80.21 Aligned_cols=95 Identities=19% Similarity=0.299 Sum_probs=71.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ..+ ..++.+.+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------~~~--~~~~~~~l 196 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR------------------------------RSF--DKEVTDIL 196 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT------------------------------TTS--CHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch------------------------------hhc--CHHHHHHH
Confidence 6899999999999999999999999999999765320 001 15677777
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+..++. + .+.++++|.+++..+ ...+...++ .++.+|.||+|+|..
T Consensus 197 ~~~l~~~-v--~i~~~~~v~~i~~~~-----------------------~v~~v~~~g-----~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 197 EEKLKKH-V--NLRLQEITMKIEGEE-----------------------RVEKVVTDA-----GEYKAELVILATGIK 243 (449)
T ss_dssp HHHHTTT-S--EEEESCCEEEEECSS-----------------------SCCEEEETT-----EEEECSEEEECSCEE
T ss_pred HHHHHhC-c--EEEeCCeEEEEeccC-----------------------cEEEEEeCC-----CEEECCEEEEeeCCc
Confidence 7777776 7 888999999987542 111223343 579999999999954
No 253
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.01 E-value=2.2e-05 Score=80.68 Aligned_cols=99 Identities=23% Similarity=0.333 Sum_probs=72.3
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.+. ..++.+.+
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~~-d~~~~~~l 220 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL-------------------------------ITLE-DQDIVNTL 220 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TTSC-CHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC-------------------------------CCCC-CHHHHHHH
Confidence 689999999999999999999999999999976531 1110 14566666
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
++..+ + .+.++++|.+++..+ ++...|++.+ .+|+..++.+|.||+|+|..
T Consensus 221 ~~~l~---v--~i~~~~~v~~i~~~~---------------------~~~v~v~~~~-~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 221 LSILK---L--NIKFNSPVTEVKKIK---------------------DDEYEVIYST-KDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHC---C--CEECSCCEEEEEEEE---------------------TTEEEEEECC-TTSCCEEEEESCEEECCCEE
T ss_pred HhcCE---E--EEEECCEEEEEEEcC---------------------CCcEEEEEEe-cCCceEEEEcCEEEECcCCC
Confidence 65444 5 788899999998742 1235566653 12444579999999999954
No 254
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.99 E-value=4.9e-06 Score=86.22 Aligned_cols=41 Identities=34% Similarity=0.628 Sum_probs=38.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
++|+|||||++||++|..|.+.|++|+|+|+++.+||....
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t 80 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWS 80 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCccee
Confidence 68999999999999999999999999999999999997554
No 255
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.99 E-value=8.6e-06 Score=79.75 Aligned_cols=96 Identities=17% Similarity=0.222 Sum_probs=68.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++++.+. . .+.+.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~--------------------------~---------~~~~~--- 197 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR--------------------------A---------SKIML--- 197 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS--------------------------S---------CTTHH---
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC--------------------------c---------cHHHH---
Confidence 689999999999999999999999999999875421 0 01121
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+++.++.++ .+.++++|++++.+. +...|.+.+..+|+.+++.+|.||+|+|..
T Consensus 198 ~~~~~~~gV--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 198 DRARNNDKI--RFLTNHTVVAVDGDT----------------------TVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp HHHHHCTTE--EEECSEEEEEEECSS----------------------SCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred HHHhccCCc--EEEeCceeEEEecCC----------------------cEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 223345677 788899999997643 123455554323445679999999999954
No 256
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.98 E-value=6.7e-06 Score=81.68 Aligned_cols=41 Identities=29% Similarity=0.383 Sum_probs=38.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
+||+|||||++|+++|..|.+.|.+|+|+|+++.+||.+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 58999999999999999999999999999999999998766
No 257
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.98 E-value=3.2e-05 Score=75.25 Aligned_cols=95 Identities=16% Similarity=0.156 Sum_probs=72.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ......+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~-----------------------------------~~~~~~~-- 197 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR-----------------------------------AHEHSVE-- 197 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS-----------------------------------SCHHHHH--
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC-----------------------------------ccHHHHH--
Confidence 689999999999999999999999999999875421 1112212
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
..++.++ .+.++++|.+++..+ +...|++.+..+++.+++.+|.||+|+|..
T Consensus 198 --~l~~~gv--~~~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 198 --NLHASKV--NVLTPFVPAELIGED----------------------KIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp --HHHHSSC--EEETTEEEEEEECSS----------------------SCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred --HHhcCCe--EEEeCceeeEEecCC----------------------ceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 2456677 788899999998654 235677777655667789999999999954
No 258
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.97 E-value=2.8e-05 Score=80.46 Aligned_cols=98 Identities=18% Similarity=0.200 Sum_probs=73.7
Q ss_pred CcEEEECCChhHHHHHHHHHhc--------------CCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK--------------GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSV 69 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~--------------g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (522)
.+++|||||+.|+.+|..|.+. ..+|+++|+.+.+-
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 3699999999999999988753 36799999987642
Q ss_pred CCCCCChhHHHHHHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCC--cee
Q 009917 70 TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNH--STE 147 (522)
Q Consensus 70 ~~~~~~~~~~~~yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g--~~~ 147 (522)
+.+ .+++.+++.+..++.|+ +++++++|++++.+. ..+..... +| ..+
T Consensus 268 -~~~--~~~~~~~~~~~L~~~GV--~v~~~~~v~~v~~~~------------------------~~~~~~~~-dg~~~~~ 317 (502)
T 4g6h_A 268 -NMF--EKKLSSYAQSHLENTSI--KVHLRTAVAKVEEKQ------------------------LLAKTKHE-DGKITEE 317 (502)
T ss_dssp -TTS--CHHHHHHHHHHHHHTTC--EEETTEEEEEECSSE------------------------EEEEEECT-TSCEEEE
T ss_pred -cCC--CHHHHHHHHHHHHhcce--eeecCceEEEEeCCc------------------------eEEEEEec-Cccccee
Confidence 222 26788999999999999 899999999987543 22333222 12 235
Q ss_pred EEEeCEEEEeeccc
Q 009917 148 VHQVDFVILCVGRF 161 (522)
Q Consensus 148 ~~~~d~lvvAtG~~ 161 (522)
++.||.||.|+|..
T Consensus 318 ~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 318 TIPYGTLIWATGNK 331 (502)
T ss_dssp EEECSEEEECCCEE
T ss_pred eeccCEEEEccCCc
Confidence 79999999999964
No 259
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.96 E-value=6.3e-05 Score=79.81 Aligned_cols=103 Identities=17% Similarity=0.126 Sum_probs=73.3
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++. .+. +.+ ..++.+++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l-------------------------------~~~--d~~~~~~~ 332 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILL-------------------------------RGF--DQQMAEKV 332 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS-------------------------------TTS--CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCc-------------------------------CcC--CHHHHHHH
Confidence 58999999999999999999999999999986 220 111 14677788
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEc-----CCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEee
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFE-----GLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAt 158 (522)
.+..++.++ .+.+++.+.++... .. + ..+...+++... +|+...+.+|.||+|+
T Consensus 333 ~~~l~~~gv--~i~~~~~v~~v~~~~~~~~~~-~-----------------~~~~~~v~~~~~-~g~~~~~~~D~vi~a~ 391 (598)
T 2x8g_A 333 GDYMENHGV--KFAKLCVPDEIKQLKVVDTEN-N-----------------KPGLLLVKGHYT-DGKKFEEEFETVIFAV 391 (598)
T ss_dssp HHHHHHTTC--EEEETEEEEEEEEEECCBTTT-T-----------------BCCEEEEEEEET-TSCEEEEEESEEEECS
T ss_pred HHHHHhCCC--EEEECCeEEEEEecccccccc-C-----------------CCceEEEEEEeC-CCcEEeccCCEEEEEe
Confidence 888888888 88999888888653 10 0 013344554321 1434456699999999
Q ss_pred ccc
Q 009917 159 GRF 161 (522)
Q Consensus 159 G~~ 161 (522)
|..
T Consensus 392 G~~ 394 (598)
T 2x8g_A 392 GRE 394 (598)
T ss_dssp CEE
T ss_pred CCc
Confidence 954
No 260
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.93 E-value=5.5e-06 Score=82.82 Aligned_cols=66 Identities=11% Similarity=0.093 Sum_probs=51.7
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|++.|.+|+++|+.+.+. + ..+ ..++.+++
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l--------------------------~----~~~--~~~~~~~~ 194 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL--------------------------E----RQL--DRDGGLFL 194 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC--------------------------T----TTS--CHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc--------------------------h----hhc--CHHHHHHH
Confidence 689999999999999999999999999999987532 0 001 25677888
Q ss_pred HHHHHhcCCccceEeeeeEE
Q 009917 84 QSYASHFDLRKHIKFNRKVV 103 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~ 103 (522)
.+..++.++ .+.++++|.
T Consensus 195 ~~~l~~~gV--~~~~~~~v~ 212 (385)
T 3klj_A 195 KDKLDRLGI--KIYTNSNFE 212 (385)
T ss_dssp HHHHHTTTC--EEECSCCGG
T ss_pred HHHHHhCCC--EEEeCCEEE
Confidence 888888887 677665553
No 261
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.92 E-value=2.9e-05 Score=74.92 Aligned_cols=96 Identities=18% Similarity=0.144 Sum_probs=70.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ... .++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~~---~~~ 189 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR-----------------------------------AAP---STV 189 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB-----------------------------------SCH---HHH
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC-----------------------------------CCH---HHH
Confidence 689999999999999999999999999999875421 012 233
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
++..++.++ .+.++++|.+++... +....|++.. .+|+..++.+|.||+|+|..
T Consensus 190 ~~~~~~~gv--~~~~~~~v~~i~~~~---------------------~~~~~v~~~~-~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 190 EKVKKNEKI--ELITSASVDEVYGDK---------------------MGVAGVKVKL-KDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHHCTTE--EEECSCEEEEEEEET---------------------TEEEEEEEEC-TTSCEEEECCSCEEECSCEE
T ss_pred HHHHhcCCe--EEEeCcEEEEEEcCC---------------------CcEEEEEEEc-CCCCeEEeecCeEEEEEcCC
Confidence 444456777 788899999998653 1223466652 23555689999999999964
No 262
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.89 E-value=7.1e-05 Score=77.91 Aligned_cols=96 Identities=17% Similarity=0.206 Sum_probs=70.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|.+|+.+|..|++.|.+|+++++.+.+. .. .++
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~-----------------------------------~~----~~l 396 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------------------------------AD----QVL 396 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC-----------------------------------SC----HHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC-----------------------------------cC----HHH
Confidence 689999999999999999999999999999875421 00 223
Q ss_pred HHHHHh-cCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 84 QSYASH-FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 84 ~~~~~~-~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+...+ .++ .+.++++|+++..++ +....|.+.+..+|+..++.+|.||+|+|..
T Consensus 397 ~~~l~~~~gV--~v~~~~~v~~i~~~~---------------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 397 QDKVRSLKNV--DIILNAQTTEVKGDG---------------------SKVVGLEYRDRVSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp HHHHTTCTTE--EEECSEEEEEEEECS---------------------SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHhcCCCc--EEEeCCEEEEEEcCC---------------------CcEEEEEEEeCCCCceEEEEcCEEEECcCCC
Confidence 333344 466 788899999998643 1112466766545666789999999999954
No 263
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.89 E-value=1.4e-05 Score=81.40 Aligned_cols=46 Identities=22% Similarity=0.218 Sum_probs=35.4
Q ss_pred ccccCCcEEEeecCceeEecC--cEEEcCCCceecccEEEEecCCCCCc
Q 009917 332 DKVEEGSIILKKSQDFSFCED--GIVVDGQTTPLKTDLVILATGFKGDV 378 (522)
Q Consensus 332 ~~l~~g~v~v~~~~i~~~~~~--gv~~~dG~~~~~~D~VI~aTG~~~~~ 378 (522)
+.+++.+|+++.+.+..++.+ .|.+++|++ +.+|.||+|||.++..
T Consensus 67 ~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~-i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 67 HYVERKGIHFIAQSAEQIDAEAQNITLADGNT-VHYDYLMIATGPKLAF 114 (437)
T ss_dssp HHHHTTTCEEECSCEEEEETTTTEEEETTSCE-EECSEEEECCCCEECG
T ss_pred HHHHHCCCEEEEeEEEEEEcCCCEEEECCCCE-EECCEEEECCCCCcCc
Confidence 344455677777777777654 588889988 9999999999998764
No 264
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.88 E-value=1.2e-05 Score=82.77 Aligned_cols=55 Identities=29% Similarity=0.438 Sum_probs=46.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC-ceEEEecCCCccccccc-cccceeecCCccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSDIGGAWIK-TVETTMLQTPKQL 57 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~~~Gg~w~~-~~~~~~~~~~~~~ 57 (522)
.++|+|||||++||++|..|.+.|+ +|+|+|+++.+||.|.. .+.+..++.....
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~ 60 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANW 60 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeE
Confidence 4789999999999999999999999 89999999999999887 5566666654443
No 265
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.85 E-value=5.6e-05 Score=73.00 Aligned_cols=101 Identities=18% Similarity=0.246 Sum_probs=66.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.. ... .+. .
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~----------------------------------~~~-~~~---~ 194 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF----------------------------------RAS-KTM---Q 194 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC----------------------------------CSC-HHH---H
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc----------------------------------ccc-chh---h
Confidence 68999999999999999999999999999986431 001 111 1
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeecccCC
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~s~ 163 (522)
.......+. .....+.+..+.... ...-.+.+.+...+..+++.+|.|++|+|.
T Consensus 195 ~~~~~~~~~--~~~~~~~~~~i~~~~---------------------~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~--- 248 (314)
T 4a5l_A 195 ERVLNHPKI--EVIWNSELVELEGDG---------------------DLLNGAKIHNLVSGEYKVVPVAGLFYAIGH--- 248 (314)
T ss_dssp HHHHTCTTE--EEECSEEEEEEEESS---------------------SSEEEEEEEETTTCCEEEEECSEEEECSCE---
T ss_pred hhhhcccce--eeEeeeeeEEEEeee---------------------eccceeEEeecccccceeeccccceEeccc---
Confidence 222233333 455566677776543 112235555544456678999999999995
Q ss_pred CCCCC
Q 009917 164 VPNIP 168 (522)
Q Consensus 164 ~p~~P 168 (522)
.|+..
T Consensus 249 ~pn~~ 253 (314)
T 4a5l_A 249 SPNSK 253 (314)
T ss_dssp EESCG
T ss_pred ccChh
Confidence 45543
No 266
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.85 E-value=4.8e-05 Score=82.08 Aligned_cols=98 Identities=16% Similarity=0.201 Sum_probs=71.5
Q ss_pred CcEEEEC--CChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 4 KQIAIVG--AGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 4 ~~vvIIG--aG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
++|+||| +|..|+.+|..|.+.|.+|+++++.+.+.... .......
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~--------------------------------~~~~~~~ 571 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT--------------------------------NNTFEVN 571 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG--------------------------------GGGTCHH
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc--------------------------------ccchhHH
Confidence 5799999 99999999999999999999999876543110 0012345
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.+.+.+++.++ .+..+++|++++.++ +.+....++..+++.+|.||+|+|..
T Consensus 572 ~l~~~l~~~GV--~i~~~~~V~~i~~~~--------------------------~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 572 RIQRRLIENGV--ARVTDHAVVAVGAGG--------------------------VTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp HHHHHHHHTTC--EEEESEEEEEEETTE--------------------------EEEEETTTCCEEEEECSEEEEESCEE
T ss_pred HHHHHHHHCCC--EEEcCcEEEEEECCe--------------------------EEEEEccCCeEEEEECCEEEECCCCC
Confidence 56666777888 899999999997532 23332222344679999999999954
No 267
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.84 E-value=1e-05 Score=83.97 Aligned_cols=42 Identities=38% Similarity=0.480 Sum_probs=38.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
.++|+|||||++||++|..|.+.|++|+|+|+++.+||.+..
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~ 74 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRT 74 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceee
Confidence 478999999999999999999999999999999999997653
No 268
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.82 E-value=1.5e-05 Score=81.06 Aligned_cols=42 Identities=12% Similarity=0.297 Sum_probs=39.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
.++|+|||||++|+++|..|.+.|.+|+|+|+++.+||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 479999999999999999999999999999999999998776
No 269
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.80 E-value=1.4e-05 Score=81.41 Aligned_cols=42 Identities=19% Similarity=0.297 Sum_probs=39.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
.+||+|||+|.+|+++|..|.+.|.+|+++|+++.+||.+..
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s 61 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETAS 61 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccc
Confidence 479999999999999999999999999999999999998775
No 270
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.74 E-value=4.8e-05 Score=76.67 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=30.4
Q ss_pred CEEEEEcCCCCHHHHHHHHhh---hcCCCCceEEEEcccce
Q 009917 204 KRVTVVGLQKSALDIAMECTT---ANGLENPCTVLYRTEHW 241 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~---~~~~~~~Vt~v~r~~~~ 241 (522)
++|+|||+|.+|+.+|..|++ .+ .+|+++.+++..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g---~~V~vie~~~~~ 39 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSK---ADVKVINKSRFS 39 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGG---SEEEEEESSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCC---CeEEEEeCCCCc
Confidence 589999999999999999998 44 359999998764
No 271
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.74 E-value=2.7e-05 Score=79.04 Aligned_cols=107 Identities=14% Similarity=0.080 Sum_probs=69.4
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccceeecCCCCCCCchhhHHHHHHHHHhhcCCChhHHHHHHHhhhh
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLS 283 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 283 (522)
++|+|||+|.+|+.+|..|++.+. ..+|+++.+++..... |...
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~~~~-------~~~~---------------------------- 46 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFT-------PAFP---------------------------- 46 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECG-------GGHH----------------------------
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCCCcC-------CCcc----------------------------
Confidence 689999999999999999998432 2469999998763211 1000
Q ss_pred hhHHHHHHHHHHHHhhhccccccCCCCCCcccccccccceeccCCcccccccCCcEEEeecCceeEecC--cEEEcCCCc
Q 009917 284 PLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQDFSFCED--GIVVDGQTT 361 (522)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~i~~~~~~--gv~~~dG~~ 361 (522)
+. ..... . ...+...+.+.+++.+|+++.+.+..++.+ .|.+++|++
T Consensus 47 ---~~--------~~g~~-------~-------------~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~ 95 (430)
T 3h28_A 47 ---HL--------AMGWR-------K-------------FEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKK 95 (430)
T ss_dssp ---HH--------HHTCS-------C-------------GGGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCE
T ss_pred ---hh--------ccCcc-------C-------------HHHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcE
Confidence 00 00000 0 000111223345556788887778888765 488889987
Q ss_pred eecccEEEEecCCCCCc
Q 009917 362 PLKTDLVILATGFKGDV 378 (522)
Q Consensus 362 ~~~~D~VI~aTG~~~~~ 378 (522)
+.+|.||+|||.++..
T Consensus 96 -i~~d~liiAtG~~~~~ 111 (430)
T 3h28_A 96 -IEYDYLVIATGPKLVF 111 (430)
T ss_dssp -EECSEEEECCCCEEEC
T ss_pred -EECCEEEEcCCccccc
Confidence 9999999999998654
No 272
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.70 E-value=0.00014 Score=74.55 Aligned_cols=35 Identities=17% Similarity=0.123 Sum_probs=32.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.++|+|||+|.+|+-+|..|.+.|.+|+++++++.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 36899999999999999999999999999998764
No 273
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.67 E-value=2.2e-05 Score=79.69 Aligned_cols=33 Identities=36% Similarity=0.543 Sum_probs=31.7
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|||||++|+++|..|++.|++|+|||+.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 689999999999999999999999999999976
No 274
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.66 E-value=2.9e-05 Score=83.27 Aligned_cols=42 Identities=36% Similarity=0.583 Sum_probs=39.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
.++|+|||||++||++|..|.+.|++|+|+|+++.+||.+..
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~ 148 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 378999999999999999999999999999999999997664
No 275
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.64 E-value=8.1e-05 Score=71.06 Aligned_cols=85 Identities=9% Similarity=0.029 Sum_probs=63.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHH
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (522)
.++|+|||+|++|+.+|..|.+.| +|+++++.+. .+.+.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~----------------------------------------~~~~~ 179 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV----------------------------------------EPDAD 179 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC----------------------------------------CCCHH
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC----------------------------------------CCCHH
Confidence 368999999999999999999999 9999987542 00122
Q ss_pred HHHHHHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 83 l~~~~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+.+..++.++ .+. +++|.+++.. + .|++.++ +++.+|.||+|+|..
T Consensus 180 ~~~~l~~~gv--~i~-~~~v~~i~~~-----------------------~--~v~~~~g-----~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 180 QHALLAARGV--RVE-TTRIREIAGH-----------------------A--DVVLADG-----RSIALAGLFTQPKLR 225 (297)
T ss_dssp HHHHHHHTTC--EEE-CSCEEEEETT-----------------------E--EEEETTS-----CEEEESEEEECCEEE
T ss_pred HHHHHHHCCc--EEE-cceeeeeecC-----------------------C--eEEeCCC-----CEEEEEEEEEccCcc
Confidence 3445566677 665 4788887632 1 5777665 578999999999964
No 276
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.64 E-value=3.4e-05 Score=84.32 Aligned_cols=42 Identities=36% Similarity=0.583 Sum_probs=38.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
.++|+|||||++||++|..|.+.|++|+|||+++.+||.+..
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 319 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 319 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceee
Confidence 368999999999999999999999999999999999997654
No 277
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.57 E-value=6.2e-05 Score=74.48 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+.||+|||||++|+++|..|++.|.+|+|+|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 4799999999999999999999999999999975
No 278
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.52 E-value=0.0002 Score=72.99 Aligned_cols=34 Identities=15% Similarity=0.014 Sum_probs=31.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCc-eEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFH-PIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~-v~i~e~~~~ 37 (522)
++|+|||+|.+|+-+|..|.+.+.+ |+++++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 6899999999999999999999998 999998653
No 279
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.50 E-value=4.9e-05 Score=74.80 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcC------CceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKG------FHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g------~~v~i~e~~~~ 37 (522)
+||+|||||++|+++|..|++.| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999998 89999999863
No 280
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.48 E-value=0.00034 Score=71.41 Aligned_cols=35 Identities=20% Similarity=0.429 Sum_probs=30.3
Q ss_pred CcEEEECCChhHHHHHHHHHhc--------------------CC-ceEEEecCCCc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK--------------------GF-HPIVFEARSDI 38 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~--------------------g~-~v~i~e~~~~~ 38 (522)
++|+|||+|..|+-+|..|.+. |. +|+|++++..+
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 6899999999999999999874 54 89999997653
No 281
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.45 E-value=0.0006 Score=65.66 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=31.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
++|+|||||+.|+.+|..|.+.|.+|+|+++.+.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 6899999999999999999999999999998764
No 282
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.45 E-value=0.00038 Score=77.78 Aligned_cols=93 Identities=19% Similarity=0.141 Sum_probs=69.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHHHH
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 83 (522)
++|+|||+|+.|+.+|..|.+.|.+|+|+|+.+.+. ..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-------------------------------------~~----- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-------------------------------------AA----- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC-------------------------------------HH-----
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc-------------------------------------hh-----
Confidence 689999999999999999999999999999876421 01
Q ss_pred HHHHHhcCCccceEeeeeEEEEEEc-CCCCcccccccccCCCCCCCCCCCcEEEEEec--CC--CCceeEEEeCEEEEee
Q 009917 84 QSYASHFDLRKHIKFNRKVVGIEFE-GLSGEDEKSWSFWNGNGQPFGSRGKWTVAVED--AK--NHSTEVHQVDFVILCV 158 (522)
Q Consensus 84 ~~~~~~~~l~~~i~~~~~V~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~--~g~~~~~~~d~lvvAt 158 (522)
.+.+++.++ .+.+++.|++++.. . +....|++.+ .. +|+.+++.+|.||+|+
T Consensus 323 ~~~l~~~GV--~v~~~~~v~~i~~~~~---------------------~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~ 379 (965)
T 2gag_A 323 AAQAVADGV--QVISGSVVVDTEADEN---------------------GELSAIVVAELDEARELGGTQRFEADVLAVAG 379 (965)
T ss_dssp HHHHHHTTC--CEEETEEEEEEEECTT---------------------SCEEEEEEEEECTTCCEEEEEEEECSEEEEEC
T ss_pred HHHHHhCCe--EEEeCCEeEEEeccCC---------------------CCEEEEEEEeccccCCCCceEEEEcCEEEECC
Confidence 233566788 89999999999873 2 1223466654 11 1344679999999999
Q ss_pred ccc
Q 009917 159 GRF 161 (522)
Q Consensus 159 G~~ 161 (522)
|..
T Consensus 380 G~~ 382 (965)
T 2gag_A 380 GFN 382 (965)
T ss_dssp CEE
T ss_pred CcC
Confidence 953
No 283
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.44 E-value=0.00015 Score=71.19 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=29.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|+|||+|.+|+.+|..|.+.+ +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 368999999999999999999988 699998863
No 284
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.41 E-value=0.0008 Score=68.69 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=30.2
Q ss_pred CcEEEECCChhHHHHHHHHH--------------------hcCC-ceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLL--------------------LKGF-HPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~--------------------~~g~-~v~i~e~~~~ 37 (522)
++|+|||+|..|+-+|..|+ +.|. +|+|++++..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 68999999999999999999 5677 6999998764
No 285
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.35 E-value=0.00062 Score=71.01 Aligned_cols=35 Identities=20% Similarity=0.329 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.++|+|||+|.+|+.+|..|++.+.+|++|++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 37899999999999999999999999999999876
No 286
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.34 E-value=0.00041 Score=75.22 Aligned_cols=69 Identities=10% Similarity=0.049 Sum_probs=51.2
Q ss_pred CcEEEEC--CChhHHHHHHHHHhcCCceEEEecCCCccccccccccceeecCCccceeecCCCCCCCCCCCCCChhHHHH
Q 009917 4 KQIAIVG--AGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (522)
Q Consensus 4 ~~vvIIG--aG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (522)
++|+||| +|..|+.+|..|++.|.+|+++++.+ +... ..++. . ..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~-----------------------------~~~~~--~-~~ 575 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANY-----------------------------MHFTL--E-YP 575 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHH-----------------------------HHHTT--C-HH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccc-----------------------------ccccc--c-HH
Confidence 6899999 99999999999999999999999976 4210 00000 1 23
Q ss_pred HHHHHHHhcCCccceEeeeeEEEEEE
Q 009917 82 YIQSYASHFDLRKHIKFNRKVVGIEF 107 (522)
Q Consensus 82 yl~~~~~~~~l~~~i~~~~~V~~v~~ 107 (522)
++.+..++.++ .+.++++|++++.
T Consensus 576 ~~~~~l~~~GV--~i~~~~~v~~i~~ 599 (729)
T 1o94_A 576 NMMRRLHELHV--EELGDHFCSRIEP 599 (729)
T ss_dssp HHHHHHHHTTC--EEECSEEEEEEET
T ss_pred HHHHHHHhCCC--EEEcCcEEEEEEC
Confidence 44555567788 8999999999874
No 287
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.33 E-value=0.00018 Score=70.45 Aligned_cols=36 Identities=33% Similarity=0.429 Sum_probs=33.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG 39 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~G 39 (522)
+||+|||||++|+.+|..|++.|.+|+|+|+++..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 589999999999999999999999999999987443
No 288
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.31 E-value=0.00049 Score=73.93 Aligned_cols=28 Identities=29% Similarity=0.413 Sum_probs=25.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEE
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIV 31 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i 31 (522)
++|+|||+|..|+.+|..|.+.|.++++
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 6899999999999999999998876653
No 289
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.27 E-value=0.00046 Score=70.32 Aligned_cols=34 Identities=15% Similarity=0.297 Sum_probs=30.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC-ceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~~ 37 (522)
++|+|||+|..|+-+|..+.+.|. +|+++++++.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 689999999999999999999998 4999998754
No 290
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.20 E-value=0.00012 Score=78.01 Aligned_cols=35 Identities=31% Similarity=0.392 Sum_probs=33.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcC--------CceEEEecCC-Cc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKG--------FHPIVFEARS-DI 38 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g--------~~v~i~e~~~-~~ 38 (522)
++|+|||||++||++|..|.+.| ++|+|||+++ .+
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 68999999999999999999988 9999999998 89
No 291
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.08 E-value=0.00027 Score=73.04 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=32.0
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 201 VKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 201 ~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
...++|+|||+|.+|+.+|..|++.+. +|+++.+.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~---~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGA---RVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCC---eEEEEEeccc
Confidence 346799999999999999999998764 5999998765
No 292
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.08 E-value=0.0028 Score=60.72 Aligned_cols=32 Identities=13% Similarity=0.204 Sum_probs=27.4
Q ss_pred EEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 205 RVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 205 ~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
.|+|||+|+.|+..|..+++.+. +|+++.+..
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~---~v~lie~~~ 39 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARK---QIALFDNNT 39 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---CEEEEECSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCC
Confidence 59999999999999999988764 599998753
No 293
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.06 E-value=0.00033 Score=69.69 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=30.7
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 203 gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
..+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~---~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGW---DVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCC
Confidence 4689999999999999999998764 4999998765
No 294
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.02 E-value=0.0028 Score=71.33 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=30.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC-ceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~ 36 (522)
.+|+|||||..|+-+|..+++.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999996 899999875
No 295
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.94 E-value=0.0015 Score=68.23 Aligned_cols=34 Identities=18% Similarity=0.363 Sum_probs=32.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
++|+|||+|++|+.+|..|++.+.+|++|++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 6899999999999999999999999999999875
No 296
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=96.79 E-value=0.0012 Score=62.79 Aligned_cols=35 Identities=23% Similarity=0.287 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhh-cCCCCceEEEEcccc
Q 009917 203 GKRVTVVGLQKSALDIAMECTTA-NGLENPCTVLYRTEH 240 (522)
Q Consensus 203 gk~VvVIG~G~sg~dia~~l~~~-~~~~~~Vt~v~r~~~ 240 (522)
..+|+|||+|.+|+.+|..|++. +. +|+++.+.+.
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~---~V~viEk~~~ 74 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNV---QVAIIEQSVS 74 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTS---CEEEEESSSS
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCC---eEEEEECCCC
Confidence 35799999999999999999985 43 5999998764
No 297
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.78 E-value=0.0055 Score=63.90 Aligned_cols=35 Identities=20% Similarity=0.442 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.++|+|||+|.+|+.+|..|++.+.+|++|++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 37899999999999999999999999999999875
No 298
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.75 E-value=0.00096 Score=69.80 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.+|++|||||++|+.+|..|.+.|.+|+|+|+...
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred ceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 47999999999999999999999999999999864
No 299
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.72 E-value=0.0014 Score=68.97 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=29.1
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
-+|+|||+|.+|+.+|..+++.+. +|+++.+.+
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~ 61 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQ---QTLLLTHNI 61 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCG
T ss_pred CCEEEECChHHHHHHHHHHHhCCC---CEEEEeecc
Confidence 479999999999999999999765 499999864
No 300
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=96.68 E-value=0.0013 Score=65.68 Aligned_cols=34 Identities=12% Similarity=0.024 Sum_probs=30.0
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~---~V~viE~~~~ 40 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGH---RVVVVEQARR 40 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCC
Confidence 479999999999999999999765 4999998765
No 301
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.65 E-value=0.0013 Score=68.28 Aligned_cols=35 Identities=14% Similarity=0.126 Sum_probs=30.3
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 203 gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.++|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~---kV~VlEr~~~ 141 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGF---NPIIVERGKE 141 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTC---CCEEECSSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---eEEEEEccCc
Confidence 4689999999999999999999764 4999998753
No 302
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.62 E-value=0.0012 Score=68.68 Aligned_cols=36 Identities=28% Similarity=0.328 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHh-cCCceEEEecCCCc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLL-KGFHPIVFEARSDI 38 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~-~g~~v~i~e~~~~~ 38 (522)
.+|+||||||+||+.+|.+|.+ .+++|+|+|+.+..
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 3799999999999999999998 67899999998653
No 303
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.60 E-value=0.00084 Score=67.54 Aligned_cols=35 Identities=14% Similarity=0.219 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 203 gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
..+|+|||+|.+|+-+|..|++.+. +|+++.+.+.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~---~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGR---RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCC
Confidence 3579999999999999999999865 4999998764
No 304
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.59 E-value=0.0015 Score=67.53 Aligned_cols=38 Identities=13% Similarity=0.178 Sum_probs=34.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCcc
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG 39 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~G 39 (522)
..+|++|||+|++|+.+|..|.+.|.+|+|+|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 35799999999999999999999999999999987544
No 305
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.56 E-value=0.0011 Score=68.95 Aligned_cols=34 Identities=29% Similarity=0.286 Sum_probs=32.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCCc
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~ 38 (522)
+|+||||||.||+.+|.+|.+ |.+|+|+|+....
T Consensus 27 yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 27 YDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred ccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 699999999999999999999 9999999998765
No 306
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.53 E-value=0.002 Score=64.34 Aligned_cols=35 Identities=29% Similarity=0.275 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 203 gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
..+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGV---DVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCC
Confidence 4689999999999999999999764 4999998875
No 307
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.52 E-value=0.0022 Score=67.39 Aligned_cols=42 Identities=19% Similarity=0.408 Sum_probs=40.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCccccccc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~Gg~w~~ 44 (522)
++||+|||+|..|...|..|.+.|.+|+++|+++..||.|..
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 479999999999999999999999999999999999999885
No 308
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.42 E-value=0.0021 Score=67.39 Aligned_cols=33 Identities=12% Similarity=0.214 Sum_probs=29.0
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
-+|+|||+|.+|+.+|..+++.+. +|.++.+.+
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~---kVlLIEk~~ 60 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGA---KTAMFVLNA 60 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC---CEEEEEecc
Confidence 469999999999999999999765 499999864
No 309
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.41 E-value=0.0028 Score=63.26 Aligned_cols=35 Identities=20% Similarity=0.194 Sum_probs=30.6
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 203 gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
..+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGI---DVSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC---EEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCC
Confidence 4689999999999999999998764 5999998764
No 310
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.39 E-value=0.0049 Score=59.76 Aligned_cols=34 Identities=15% Similarity=0.226 Sum_probs=29.6
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~---~V~vlE~~~~ 36 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCC---cEEEEECCCC
Confidence 469999999999999999999765 4999998753
No 311
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.35 E-value=0.002 Score=67.45 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcC-CceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g-~~v~i~e~~~~ 37 (522)
.+|+||||||.||+++|.+|.+.+ .+|+|+|+.+.
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 379999999999999999999987 79999999875
No 312
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.31 E-value=0.004 Score=65.42 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=29.7
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 203 gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
.-+|+|||+|..|+++|..+++.+. +|+++.+.+
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~ 54 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGL---HCLLITSDL 54 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCC---cEEEEEecc
Confidence 3589999999999999999999865 499999874
No 313
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.29 E-value=0.0027 Score=66.84 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=33.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHh-cCCceEEEecCCCc
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLL-KGFHPIVFEARSDI 38 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~-~g~~v~i~e~~~~~ 38 (522)
..+|++|||+|++|+++|.+|.+ .|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 34799999999999999999999 79999999988643
No 314
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.28 E-value=0.005 Score=52.33 Aligned_cols=35 Identities=14% Similarity=0.169 Sum_probs=33.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~ 35 (522)
|.+.+|+|+|+|..|...+..|.+.|++|+++|++
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 77789999999999999999999999999999985
No 315
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.24 E-value=0.003 Score=65.28 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=32.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.+|++|||+|++|+.+|..|.+.|.+|+|+|+...
T Consensus 11 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 11 RVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 47999999999999999999999999999999764
No 316
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.16 E-value=0.0024 Score=63.96 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=31.0
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 201 VKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 201 ~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.+..+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~---~V~v~E~~~~ 57 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGI---DCDVYEAVKE 57 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCC
Confidence 445689999999999999999999865 4999999864
No 317
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.14 E-value=0.0088 Score=58.21 Aligned_cols=33 Identities=15% Similarity=0.033 Sum_probs=28.2
Q ss_pred CEEEEEcCCCCHHHHHHHHhh---hcCCCCceEEEEccc
Q 009917 204 KRVTVVGLQKSALDIAMECTT---ANGLENPCTVLYRTE 239 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~---~~~~~~~Vt~v~r~~ 239 (522)
++|+|||+|.+|+-+|..|++ .+ .+|+++.+++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G---~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGP---LYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CC---EEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCC---ceEEEEECCC
Confidence 479999999999999999998 44 3599998864
No 318
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.13 E-value=0.0033 Score=56.87 Aligned_cols=36 Identities=28% Similarity=0.164 Sum_probs=31.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcc
Q 009917 200 LVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (522)
Q Consensus 200 ~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~ 238 (522)
+.+||+|+|||+|.+|.-.+..|.+.+.. |+++.+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~---VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAA---ITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCC---EEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCE---EEEECCC
Confidence 47899999999999999999999998765 9998753
No 319
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.06 E-value=0.0034 Score=65.73 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhc-CCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~-g~~v~i~e~~~ 36 (522)
.+|+||||||.||+.+|.+|.+. +.+|+|+|+.+
T Consensus 19 ~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 19 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 37999999999999999999985 78999999987
No 320
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.04 E-value=0.03 Score=58.74 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=29.8
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.+|+|||+|.+|+-+|..+++.+. +|+++.+.+.
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~---~V~vlEk~~~ 160 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGA---KVILIEKEPV 160 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCC
Confidence 479999999999999999998765 4999998764
No 321
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.02 E-value=0.019 Score=59.16 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=30.0
Q ss_pred CcEEEECCChhHHHHHHHHHhc--CCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~~ 37 (522)
++|+|||+|.+|+.++..|++. +.+|+++-|++.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 6899999999999999999875 678999988754
No 322
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.00 E-value=0.0057 Score=61.40 Aligned_cols=33 Identities=12% Similarity=0.080 Sum_probs=29.2
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.|.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~---~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGF---KVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCC
Confidence 479999999999999999998765 499999875
No 323
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.00 E-value=0.0036 Score=65.38 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=32.8
Q ss_pred CCcEEEECCChhHHHHHHHHHh-cCCceEEEecCCCc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLL-KGFHPIVFEARSDI 38 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~-~g~~v~i~e~~~~~ 38 (522)
.+|++|||||.||+.+|.+|.+ .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3799999999999999999999 68999999998755
No 324
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.95 E-value=0.0038 Score=62.46 Aligned_cols=34 Identities=15% Similarity=0.150 Sum_probs=29.5
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.+|+|||+|.+|+-+|..+++.+. +|+++.+.+.
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~---~V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGK---SVTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCC---CEEEEeCCCC
Confidence 359999999999999999998765 4999998764
No 325
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=95.86 E-value=0.0031 Score=64.09 Aligned_cols=47 Identities=13% Similarity=0.279 Sum_probs=34.7
Q ss_pred cccccccCCcEEEeecC-ceeEe--cC---cEEEcCCCceecccEEEEecCCCC
Q 009917 329 KFYDKVEEGSIILKKSQ-DFSFC--ED---GIVVDGQTTPLKTDLVILATGFKG 376 (522)
Q Consensus 329 ~~~~~l~~g~v~v~~~~-i~~~~--~~---gv~~~dG~~~~~~D~VI~aTG~~~ 376 (522)
.+.+.+++.+|+++.+. +.++. ++ +|.+.+|++ +.+|.||+|||-..
T Consensus 139 ~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~-i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 139 ALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEV-LETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCE-EECSCEEECCCCSS
T ss_pred HHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCE-EECCEEEECCCCCc
Confidence 34555666678888765 76664 23 367788876 99999999999886
No 326
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=95.85 E-value=0.004 Score=61.99 Aligned_cols=33 Identities=21% Similarity=0.168 Sum_probs=29.3
Q ss_pred EEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 205 RVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 205 ~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
+|+|||+|.+|+-+|..|++.+.+ |+++.|.+.
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~---v~v~E~~~~ 36 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGID---NVILERQTP 36 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 699999999999999999998754 999998764
No 327
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.77 E-value=0.01 Score=50.56 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=31.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
..+|+|||+|.-|..+|..|.+.|.+|+++|+++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36899999999999999999999999999998653
No 328
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.74 E-value=0.0058 Score=63.73 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhc-CCceEEEecCCCc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARSDI 38 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~-g~~v~i~e~~~~~ 38 (522)
.+|++|||+|.+|+++|.+|.+. |.+|+|+|+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 37999999999999999999997 8999999998654
No 329
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.67 E-value=0.011 Score=49.02 Aligned_cols=34 Identities=26% Similarity=0.321 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|+|||+|..|...|..|.+.|.+|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999999853
No 330
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.67 E-value=0.012 Score=49.11 Aligned_cols=33 Identities=12% Similarity=0.240 Sum_probs=30.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 589999999999999999999999999999863
No 331
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.62 E-value=0.018 Score=57.38 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=29.7
Q ss_pred EEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 205 RVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 205 ~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
||+|||+|.+|+=+|..|++.+- +|+++.|.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~---~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGI---KVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCC---CEEEEecCCC
Confidence 79999999999999999999875 4999998765
No 332
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.58 E-value=0.014 Score=48.75 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=31.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 579999999999999999999999999999864
No 333
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.54 E-value=0.065 Score=56.05 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=29.8
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
-+|+|||+|.+|+-+|..+++.+. +|+++.+.+.
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~---~V~vlEk~~~ 155 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGA---NVILVDKAPF 155 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTC---CEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCC
Confidence 379999999999999999999875 4999998764
No 334
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.46 E-value=0.033 Score=59.80 Aligned_cols=34 Identities=9% Similarity=0.068 Sum_probs=29.7
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 203 gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
..+|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~---~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGA---VVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTC---CEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCC---cEEEEeCCC
Confidence 4679999999999999999998765 499999853
No 335
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=95.43 E-value=0.0042 Score=63.26 Aligned_cols=34 Identities=9% Similarity=-0.012 Sum_probs=29.5
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
-+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~---~V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGL---KILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSC---CEEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCC
Confidence 369999999999999999998765 4999998764
No 336
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=95.27 E-value=0.0069 Score=63.71 Aligned_cols=35 Identities=11% Similarity=0.156 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 202 KGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 202 ~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
...+|+|||||.+|+-+|..|++.+. +|+++.+.+
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~---~V~LiEr~~ 56 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGH---DVTIYERSA 56 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCC---CEEEEcCCC
Confidence 34789999999999999999999764 599999875
No 337
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.22 E-value=0.01 Score=61.43 Aligned_cols=33 Identities=15% Similarity=0.076 Sum_probs=29.2
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~---~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGH---RVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC---CEEEEccCC
Confidence 479999999999999999998764 499999876
No 338
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=95.17 E-value=0.04 Score=54.55 Aligned_cols=34 Identities=15% Similarity=0.001 Sum_probs=29.8
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~---~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGL---KTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCC
Confidence 369999999999999999999765 4999998764
No 339
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.13 E-value=0.021 Score=47.40 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|+|+|..|..++..|.+.|.+|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999853
No 340
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=95.10 E-value=0.015 Score=60.89 Aligned_cols=34 Identities=26% Similarity=0.150 Sum_probs=29.6
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~---~V~VlEr~~~ 83 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGV---GALVLEKLVE 83 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTC---CEEEEBSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC---CEEEEcCCCC
Confidence 469999999999999999999865 4999998765
No 341
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=95.10 E-value=0.098 Score=53.92 Aligned_cols=34 Identities=26% Similarity=0.316 Sum_probs=29.5
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
-.|+|||+|.+|+-+|..+++.+. +|+++.+.+.
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~---~V~vlEk~~~ 75 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGA---DVLVLERTSG 75 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCC
Confidence 369999999999999999999765 4999998764
No 342
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.03 E-value=0.018 Score=46.06 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=30.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcC-CceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g-~~v~i~e~~~ 36 (522)
++|+|||+|..|..++..|.+.| .+|+++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 58999999999999999999999 8999999863
No 343
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=94.97 E-value=0.11 Score=54.51 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 203 gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
..+|+|||+|.+|+.+|..+++.+. +|+++.+.+.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~---~v~~~e~~~~ 160 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGA---KVILLEKEPI 160 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSC---CEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---cEEEEecCCC
Confidence 4579999999999999999998765 4999998764
No 344
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.93 E-value=0.025 Score=49.47 Aligned_cols=34 Identities=29% Similarity=0.324 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhc-CCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~-g~~v~i~e~~~ 36 (522)
..+|+|||+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 35899999999999999999999 99999999864
No 345
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.64 E-value=0.03 Score=52.85 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=32.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
|+.++|+|||+|.-|...|..|++.|++|+++|+++
T Consensus 2 m~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 2 TGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 344789999999999999999999999999999864
No 346
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=94.52 E-value=0.04 Score=57.19 Aligned_cols=34 Identities=26% Similarity=0.154 Sum_probs=30.2
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.+|+|||+|.+|+-+|..|++.+. +|+++.|.+.
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~---~v~viEr~~~ 39 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGV---RVLVVERRPG 39 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCC
Confidence 479999999999999999999865 4999998875
No 347
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.39 E-value=0.036 Score=53.76 Aligned_cols=35 Identities=34% Similarity=0.326 Sum_probs=31.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~ 35 (522)
|..++|+|||+|.-|.+.|..|.+.|.+|++++++
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 66789999999999999999999999999999974
No 348
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.36 E-value=0.042 Score=49.60 Aligned_cols=34 Identities=21% Similarity=0.269 Sum_probs=31.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecC
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~ 35 (522)
+.++|+|||||..|...+..|++.|.+|+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3478999999999999999999999999999864
No 349
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.31 E-value=0.037 Score=56.15 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|+|||.|.+|+++|..|.++|++|+++|+++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3789999999999999999999999999999865
No 350
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=94.30 E-value=0.059 Score=55.39 Aligned_cols=36 Identities=25% Similarity=0.185 Sum_probs=31.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 202 KGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 202 ~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
...+|+|||+|.+|+=+|..|++.+. +|+++.|.+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~---~v~vlE~~~~ 46 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGV---DVMVLEQLPQ 46 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCC
Confidence 34579999999999999999999875 4999998765
No 351
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.17 E-value=0.033 Score=56.23 Aligned_cols=36 Identities=31% Similarity=0.659 Sum_probs=32.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCCc
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~~ 38 (522)
.++|+|||.|.+|+++|..|.++|++|+++|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 478999999999999999999999999999987643
No 352
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.10 E-value=0.038 Score=49.84 Aligned_cols=32 Identities=9% Similarity=0.363 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 5 ~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+|+|||+|.-|...|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999864
No 353
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.07 E-value=0.049 Score=53.70 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
..+|+|||+|..|+.+|..|+..|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 36899999999999999999999999999998753
No 354
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.05 E-value=0.045 Score=52.58 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=31.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+.++|+|||+|.-|.+.|..|++.|++|+++|+++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34789999999999999999999999999999875
No 355
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.97 E-value=0.048 Score=53.20 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=31.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCC-ceEEEecC
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~ 35 (522)
+..+|+|+|||.+|+.+|+.|...|. +|+++|++
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 34689999999999999999999999 89999986
No 356
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.95 E-value=0.046 Score=53.43 Aligned_cols=36 Identities=31% Similarity=0.524 Sum_probs=31.4
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
|..++|+|||+|.-|...|..|.+.|++|+++++++
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 455799999999999999999999999999999853
No 357
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.93 E-value=0.059 Score=50.72 Aligned_cols=36 Identities=25% Similarity=0.321 Sum_probs=32.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
|..++|+|+|+|.-|..++..|++.|++|+++.|+.
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 666899999999999999999999999999999864
No 358
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.77 E-value=0.055 Score=52.10 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=30.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|||+|.-|.+.|..|.+.|.+|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999853
No 359
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.76 E-value=0.055 Score=52.73 Aligned_cols=34 Identities=24% Similarity=0.486 Sum_probs=31.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCC-ceEEEecC
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~ 35 (522)
+..+|+|+|||.+|+.+|+.|...|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35789999999999999999999998 79999986
No 360
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.70 E-value=0.054 Score=54.75 Aligned_cols=36 Identities=25% Similarity=0.402 Sum_probs=32.3
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
|. ++|+|||+|.-|+..|..|++.|++|+++|+++.
T Consensus 1 M~-mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 54 6899999999999999999999999999998753
No 361
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.65 E-value=0.05 Score=50.77 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|+|||+|-.|...+..|++.|.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4789999999999999999999999999999753
No 362
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.56 E-value=0.064 Score=54.40 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=32.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhc-CC-ceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLK-GF-HPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~-g~-~v~i~e~~~~ 37 (522)
.++|+|||+|.-|+.+|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 36899999999999999999999 99 9999999865
No 363
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.55 E-value=0.059 Score=51.49 Aligned_cols=35 Identities=26% Similarity=0.261 Sum_probs=30.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
..++|+|||+|.-|...|..|.+.|++|+++++++
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 34689999999999999999999999999999853
No 364
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.52 E-value=0.056 Score=52.86 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
..+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999875
No 365
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.49 E-value=0.072 Score=51.15 Aligned_cols=36 Identities=25% Similarity=0.476 Sum_probs=32.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCC-ceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~ 36 (522)
|..++|+|||||..|.+.|..|+..|+ +++++|.++
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 666799999999999999999999988 999999864
No 366
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.45 E-value=0.06 Score=51.61 Aligned_cols=32 Identities=38% Similarity=0.372 Sum_probs=29.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~ 35 (522)
++|+|||+|.-|.+.|..|.+.|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 68999999999999999999999999999985
No 367
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.28 E-value=0.081 Score=50.38 Aligned_cols=33 Identities=15% Similarity=0.384 Sum_probs=30.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|||+|.-|...|..|++.|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 368
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.22 E-value=0.083 Score=51.59 Aligned_cols=34 Identities=35% Similarity=0.369 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|+|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 369
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.21 E-value=0.042 Score=49.69 Aligned_cols=36 Identities=19% Similarity=0.223 Sum_probs=31.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEE-EecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIV-FEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i-~e~~~ 36 (522)
|..++|+|||+|.-|.+.|..|.+.|++|++ +++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 3346899999999999999999999999998 88764
No 370
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.21 E-value=0.041 Score=50.82 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=29.2
Q ss_pred EEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 205 RVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 205 ~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.|+|||+|.+|+-+|..|++.+-. |+++.+++.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~---V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCC
Confidence 499999999999999999998754 999998753
No 371
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.14 E-value=0.092 Score=47.01 Aligned_cols=35 Identities=17% Similarity=0.304 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.++|+|||+|.-|.+.|..|.+.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 36899999999999999999999999999998764
No 372
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.10 E-value=0.072 Score=50.59 Aligned_cols=35 Identities=14% Similarity=0.162 Sum_probs=32.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
+++|.|||.|.-|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998764
No 373
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.06 E-value=0.097 Score=50.23 Aligned_cols=36 Identities=31% Similarity=0.526 Sum_probs=32.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCC-ceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~ 36 (522)
|..++|+|||+|..|.+.|..|+..++ +++++|.++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 667899999999999999999999888 999999864
No 374
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.03 E-value=0.099 Score=46.16 Aligned_cols=36 Identities=36% Similarity=0.490 Sum_probs=32.9
Q ss_pred CCCCcEEEECC-ChhHHHHHHHHHhcCCceEEEecCC
Q 009917 1 MEKKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGa-G~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
|..++|+|+|| |.-|..++..|++.|.+|++++|++
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 66678999999 9999999999999999999999864
No 375
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.03 E-value=0.076 Score=50.39 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=31.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|||+|.-|.+.|..|.+.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 689999999999999999999999999999874
No 376
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.97 E-value=0.081 Score=53.89 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=31.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|+|||+|.-|+..|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999865
No 377
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.96 E-value=0.09 Score=48.82 Aligned_cols=37 Identities=14% Similarity=0.189 Sum_probs=32.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcC----CceEEEecCCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKG----FHPIVFEARSD 37 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g----~~v~i~e~~~~ 37 (522)
|..++|.|||+|.-|.+.|..|.+.| .+|+++++++.
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 66679999999999999999999998 68999998653
No 378
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.95 E-value=0.092 Score=49.48 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 5 ~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
+|+|||+|.-|...|..|.+.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998753
No 379
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=92.91 E-value=0.19 Score=52.05 Aligned_cols=32 Identities=19% Similarity=0.291 Sum_probs=27.9
Q ss_pred EEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 205 RVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 205 ~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
+|+|||+|.+|+-+|..+++ +. +|+++.+.+.
T Consensus 10 DVvVVG~G~AGl~aAl~la~-G~---~V~vlEk~~~ 41 (540)
T 1chu_A 10 DVLIIGSGAAGLSLALRLAD-QH---QVIVLSKGPV 41 (540)
T ss_dssp SEEEECCSHHHHHHHHHHTT-TS---CEEEECSSCT
T ss_pred CEEEECccHHHHHHHHHHhc-CC---cEEEEECCCC
Confidence 59999999999999999998 64 4999998753
No 380
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.91 E-value=0.098 Score=48.12 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.++|.|||+|.-|.+.|..|.+.|++|+++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 47899999999999999999999999999998753
No 381
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.85 E-value=0.091 Score=51.31 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=32.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
..++|.|||.|.-|...|..|++.|++|+++|+++
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 45789999999999999999999999999999875
No 382
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.82 E-value=0.066 Score=54.26 Aligned_cols=35 Identities=20% Similarity=0.018 Sum_probs=30.7
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEc
Q 009917 200 LVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYR 237 (522)
Q Consensus 200 ~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r 237 (522)
+.+||+|+|||+|.+|.-.+..|.+.+.. |+++..
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga~---V~vi~~ 43 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGAR---LTVNAL 43 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBE---EEEEES
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcCE---EEEEcC
Confidence 36789999999999999999999998754 998875
No 383
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.76 E-value=0.044 Score=45.76 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=30.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|||+|..|...+..|.+.|.+|++++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 689999999999999999999999999999853
No 384
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.66 E-value=0.091 Score=53.56 Aligned_cols=36 Identities=28% Similarity=0.435 Sum_probs=32.3
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
|.+++|.|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 678899999999999999999999999999999864
No 385
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.66 E-value=0.12 Score=48.65 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=32.4
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCC---ceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGF---HPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~---~v~i~e~~~ 36 (522)
|..++|.|||+|.-|-+.|..|.+.|+ +|+++|+++
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 667899999999999999999999998 899999864
No 386
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.63 E-value=0.087 Score=50.37 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=31.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.+|+|||||.-|-..|..++..|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 589999999999999999999999999999864
No 387
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.62 E-value=0.12 Score=49.92 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=31.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC-ceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~~ 37 (522)
++|+|||||..|.+.|..|+..|+ +|+++|.++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 589999999999999999999998 9999998643
No 388
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.60 E-value=0.11 Score=49.79 Aligned_cols=35 Identities=20% Similarity=0.485 Sum_probs=31.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCC-ceEEEecC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~ 35 (522)
|..++|+|||+|.-|.+.|..|+..|+ +++++|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 345689999999999999999999999 99999986
No 389
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.58 E-value=0.092 Score=52.15 Aligned_cols=35 Identities=29% Similarity=0.423 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
..+|+|||+|..|+.++..++..|.+|+++|++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 36899999999999999999999999999998753
No 390
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.58 E-value=0.11 Score=49.92 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=32.1
Q ss_pred CCC-CcEEEECCChhHHHHHHHHHhcCC-ceEEEecCC
Q 009917 1 MEK-KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (522)
Q Consensus 1 m~~-~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~ 36 (522)
|.+ ++|+|||+|.-|.+.|..|++.|+ +|+++|+++
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 543 689999999999999999999998 999999864
No 391
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.50 E-value=0.11 Score=50.07 Aligned_cols=33 Identities=18% Similarity=0.412 Sum_probs=30.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC-ceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~ 36 (522)
++|+|||||..|.+.|..|+..|+ +|+++|.++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 589999999999999999999998 999999864
No 392
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.46 E-value=0.13 Score=49.41 Aligned_cols=34 Identities=24% Similarity=0.508 Sum_probs=30.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC-ceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~ 36 (522)
.++|+|||||..|..+|..|+..|+ +|+++|.++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4689999999999999999999998 899999764
No 393
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.46 E-value=0.11 Score=50.30 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=31.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.+|+|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 789999999999999999999999999999853
No 394
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.31 E-value=0.12 Score=49.32 Aligned_cols=34 Identities=24% Similarity=0.435 Sum_probs=31.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
++|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 6899999999999999999999999999998753
No 395
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.26 E-value=0.13 Score=51.86 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
..+++|||.|.-|+.+|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999999875
No 396
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.25 E-value=0.12 Score=51.00 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
..+|+|||+|..|+.++..++..|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 397
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.24 E-value=0.24 Score=50.71 Aligned_cols=46 Identities=17% Similarity=0.095 Sum_probs=33.0
Q ss_pred HHhcCCccceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 87 ASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 87 ~~~~~l~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
+++.++ .+.++++|.+++..+ +...|.+.++ .++.+|.||+|+|..
T Consensus 267 l~~~GV--~v~~~~~v~~i~~~~----------------------~v~~v~~~~g-----~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 267 LERWGI--DYVHIPNVKRVEGNE----------------------KVERVIDMNN-----HEYKVDALIFADGRR 312 (493)
T ss_dssp HHHHTC--EEEECSSEEEEECSS----------------------SCCEEEETTC-----CEEECSEEEECCCEE
T ss_pred HHhCCc--EEEeCCeeEEEecCC----------------------ceEEEEeCCC-----eEEEeCEEEECCCcC
Confidence 445677 788899999987543 2234555444 579999999999964
No 398
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.22 E-value=0.069 Score=52.14 Aligned_cols=37 Identities=24% Similarity=0.266 Sum_probs=32.4
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcC-------CceEEEecCCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKG-------FHPIVFEARSD 37 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g-------~~v~i~e~~~~ 37 (522)
|..++|+|||+|.-|.+.|..|.+.| .+|+++++++.
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 55568999999999999999999998 89999998754
No 399
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.07 E-value=0.13 Score=48.88 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|.|||+|.-|...|..|.+.|++|+++|+++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3689999999999999999999999999999864
No 400
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.01 E-value=0.13 Score=51.39 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
++|+|||+|.-|+..|..|++ |++|+++|+++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 589999999999999999998 999999998754
No 401
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.92 E-value=0.16 Score=45.66 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=30.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|||+|.-|.+.|..|.+.|++|++++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999999999999999999999999999863
No 402
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.92 E-value=0.13 Score=48.15 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=31.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|+|||.-|-.++..|++.|++|+++.|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 689999999999999999999999999999864
No 403
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=91.91 E-value=0.11 Score=49.26 Aligned_cols=36 Identities=28% Similarity=0.498 Sum_probs=29.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
|. ++|.+||-|.-|...|..|++.|++|+++|+++.
T Consensus 4 Ms-~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 4 MS-EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CC-CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CC-CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 54 5799999999999999999999999999998764
No 404
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.89 E-value=0.13 Score=48.41 Aligned_cols=34 Identities=18% Similarity=0.429 Sum_probs=31.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
++|.|||+|.-|...|..|.+.|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5899999999999999999999999999998753
No 405
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.84 E-value=0.16 Score=48.68 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|+|||+|.-|...|..|.+.|++|+++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 406
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.84 E-value=0.15 Score=48.91 Aligned_cols=34 Identities=24% Similarity=0.407 Sum_probs=30.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC--ceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~ 36 (522)
+.+|+|||+|..|.++|..|+..++ +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999887 899999764
No 407
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.83 E-value=0.13 Score=51.43 Aligned_cols=34 Identities=15% Similarity=0.389 Sum_probs=31.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.+|+|||.|+.||.+|..|++.|++|+.||-++.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 4899999999999999999999999999998753
No 408
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.82 E-value=0.16 Score=48.84 Aligned_cols=34 Identities=24% Similarity=0.213 Sum_probs=30.1
Q ss_pred CCcEEEECCChhHHH-HHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLL-ACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~-~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|.|||.|-+|++ +|..|.++|++|+++|+++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 368999999999996 7788889999999999864
No 409
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.78 E-value=0.15 Score=49.09 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=30.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcC----CceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKG----FHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g----~~v~i~e~~~ 36 (522)
|+.++|.|||+|.-|.+.|..|.+.| .+|+++++++
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 34568999999999999999999999 7899998864
No 410
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.78 E-value=0.15 Score=51.86 Aligned_cols=35 Identities=14% Similarity=0.388 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
..++|+|||+|.-|...|..|++.|++|+++|+++
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34689999999999999999999999999999875
No 411
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.77 E-value=0.15 Score=48.89 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=31.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|.|||+|.-|...|..|.+.|++|+++|+++
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 589999999999999999999999999999864
No 412
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.75 E-value=0.15 Score=48.72 Aligned_cols=34 Identities=35% Similarity=0.490 Sum_probs=30.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
|. ++|+|||+|.-|.+.|..|. .|.+|++++|++
T Consensus 1 M~-mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 1 MS-LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CC-CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 44 68999999999999999999 999999999853
No 413
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.72 E-value=0.15 Score=51.73 Aligned_cols=34 Identities=15% Similarity=0.237 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|+|||+|.-|...|..|++.|++|+++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 414
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.72 E-value=0.13 Score=52.37 Aligned_cols=36 Identities=25% Similarity=0.379 Sum_probs=32.3
Q ss_pred CCC-CcEEEECCChhHHHHHHHHHhc--CCceEEEecCC
Q 009917 1 MEK-KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARS 36 (522)
Q Consensus 1 m~~-~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~ 36 (522)
|.+ ++|+|||+|.-|+..|..|++. |++|+++|+++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 553 6899999999999999999998 89999999865
No 415
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.67 E-value=0.15 Score=48.83 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC--ceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~ 36 (522)
++|+|||+|..|...|..|.+.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999999998 999999853
No 416
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.64 E-value=0.13 Score=51.75 Aligned_cols=32 Identities=28% Similarity=0.431 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 5 ~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+|+|||+|.-|+..|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 417
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.62 E-value=0.17 Score=50.93 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=31.2
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|||+|.-|...|..|++.|++|+++|+++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 689999999999999999999999999999865
No 418
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.59 E-value=0.17 Score=49.53 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=31.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
++|+|||||..|..++..+++.|++++++|.+++
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5899999999999999999999999999998764
No 419
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.58 E-value=0.17 Score=48.23 Aligned_cols=33 Identities=27% Similarity=0.520 Sum_probs=30.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC-ceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~ 36 (522)
++|+|||||..|...|..|+..|+ +++++|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 689999999999999999999986 899999754
No 420
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.57 E-value=0.14 Score=49.19 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=31.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcC-CceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g-~~v~i~e~~~ 36 (522)
++|.|||+|.-|...|..|++.| ++|+++|+++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 68999999999999999999999 9999999874
No 421
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.52 E-value=0.14 Score=52.31 Aligned_cols=33 Identities=24% Similarity=0.396 Sum_probs=30.5
Q ss_pred CcEEEECCChhHHHHHHHHHhc--CCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~ 36 (522)
++|+|||+|.-|+..|..|++. |++|+++|+++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999998 78999999865
No 422
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.51 E-value=0.17 Score=51.35 Aligned_cols=37 Identities=22% Similarity=0.254 Sum_probs=33.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
|.+++|.|||.|.-|...|..|.+.|++|+++|+++.
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4557899999999999999999999999999998763
No 423
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.45 E-value=0.19 Score=46.94 Aligned_cols=33 Identities=18% Similarity=0.088 Sum_probs=30.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~ 35 (522)
.++|+|+|+|-.|.++|..|.+.|.+|+|++|+
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 468999999999999999999999999999875
No 424
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.44 E-value=0.17 Score=49.57 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=30.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.+|+|||+|..|+.++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999863
No 425
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.42 E-value=0.2 Score=48.47 Aligned_cols=35 Identities=17% Similarity=0.365 Sum_probs=30.8
Q ss_pred CCCCcEEEECC-ChhHHHHHHHHHhcCC--ceEEEecC
Q 009917 1 MEKKQIAIVGA-GVSGLLACKYLLLKGF--HPIVFEAR 35 (522)
Q Consensus 1 m~~~~vvIIGa-G~aGl~~a~~l~~~g~--~v~i~e~~ 35 (522)
|..++|+|||+ |..|.++|..++..|+ +++++|..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 45679999998 9999999999999885 79999975
No 426
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.41 E-value=0.19 Score=46.68 Aligned_cols=33 Identities=27% Similarity=0.271 Sum_probs=30.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|||+|-+|-+++..|.+.|.+|+|+.|+.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999998899999864
No 427
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.41 E-value=0.17 Score=47.76 Aligned_cols=33 Identities=12% Similarity=0.237 Sum_probs=30.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|.|||+|.-|-..|..|+ .|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 478999999999999999999 999999999865
No 428
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.38 E-value=0.11 Score=48.53 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=31.7
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcc
Q 009917 200 LVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (522)
Q Consensus 200 ~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~ 238 (522)
..+||+|+|||+|.+|.-.+..|.+.+.. |+++...
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~---VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCK---LTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCE---EEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCE---EEEEcCC
Confidence 36899999999999999999999998764 9999854
No 429
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.37 E-value=0.18 Score=45.84 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=31.5
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHhcCCceEEEecCC
Q 009917 2 EKKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 2 ~~~~vvIIGa-G~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
..++|+|.|| |.-|..++..|++.|.+|+++.|++
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3478999998 9999999999999999999999864
No 430
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.32 E-value=0.18 Score=48.40 Aligned_cols=34 Identities=12% Similarity=0.307 Sum_probs=29.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHhcCC--ceEEEecC
Q 009917 2 EKKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEAR 35 (522)
Q Consensus 2 ~~~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~ 35 (522)
...+|+|||||..|.++|..|...++ ++.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 44689999999999999999998875 79999875
No 431
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.24 E-value=0.18 Score=48.05 Aligned_cols=33 Identities=24% Similarity=0.457 Sum_probs=30.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC--ceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~ 36 (522)
++|+|||||..|.+.|..|+..|+ +|+++|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 899999853
No 432
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.17 E-value=0.14 Score=43.17 Aligned_cols=39 Identities=18% Similarity=0.173 Sum_probs=32.3
Q ss_pred hccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 199 NLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 199 ~~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
....+++|+|+|+|..|.-++..|...+. +|+++.|++.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~---~V~vid~~~~ 53 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH---SVVVVDKNEY 53 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCGG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC---eEEEEECCHH
Confidence 45678999999999999999999988764 4999988764
No 433
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.17 E-value=0.22 Score=47.50 Aligned_cols=34 Identities=18% Similarity=0.433 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|.|||.|.-|...|..|++.|++|+++|+++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 434
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=91.10 E-value=0.15 Score=48.12 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=31.3
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
++|.|||+|.-|...|..|.+.|++|+++|+++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998653
No 435
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.08 E-value=0.2 Score=51.04 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=32.9
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
|.+++|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 666789999999999999999999999999999864
No 436
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.99 E-value=0.2 Score=49.23 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|+|||+|..|..+|..++..|.+|+++|+++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999863
No 437
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.98 E-value=0.17 Score=48.40 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=30.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC-ceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~ 35 (522)
.++|.|||.|.-|...|..|.+.|+ +|+++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3689999999999999999999999 99999985
No 438
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.96 E-value=0.21 Score=49.05 Aligned_cols=34 Identities=24% Similarity=0.361 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
.++|+|||+|..|..+|..|+..|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3689999999999999999999999999999853
No 439
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.90 E-value=0.19 Score=46.32 Aligned_cols=33 Identities=27% Similarity=0.444 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC-ceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~ 36 (522)
.+|+|||+|-.|..+|..|.+.|. +++|+|+..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 689999999999999999999998 799999864
No 440
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.87 E-value=0.22 Score=47.16 Aligned_cols=33 Identities=21% Similarity=0.108 Sum_probs=30.4
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC-ceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~ 35 (522)
.++|+|||+|-+|.++|..|.+.|. +|+|++|+
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999998 89999885
No 441
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.85 E-value=0.24 Score=47.44 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=30.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC--ceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~ 36 (522)
++|+|||+|.-|-+.|..|++.|+ +|+++|+++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 689999999999999999999999 899999864
No 442
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.78 E-value=0.11 Score=52.59 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.++|+|+|+|--|...|..|.+.|++|+++|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46899999999999999999999999999998753
No 443
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.74 E-value=0.22 Score=44.36 Aligned_cols=32 Identities=25% Similarity=0.273 Sum_probs=29.9
Q ss_pred cEEEEC-CChhHHHHHHHHHhcCCceEEEecCC
Q 009917 5 QIAIVG-AGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 5 ~vvIIG-aG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+|+||| +|..|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999864
No 444
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.68 E-value=0.17 Score=50.25 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 5 ~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+|+|||+|.-|+..|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 79999999999999999999 99999999864
No 445
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.63 E-value=0.23 Score=49.41 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+.+|+|||.|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999875
No 446
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=90.60 E-value=0.23 Score=48.04 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=31.1
Q ss_pred CCCCcEEEECC-ChhHHHHHHHHHhcCCceEEEecCC
Q 009917 1 MEKKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGa-G~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
|.+++|+|+|| |.-|...+..|++.|++|+++.|++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 44578999999 9999999999999999999999865
No 447
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.56 E-value=0.14 Score=50.20 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 5 ~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+|+|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999864
No 448
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.48 E-value=0.24 Score=47.27 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHHhc--CCceEEEecCC
Q 009917 5 QIAIVGAGVSGLLACKYLLLK--GFHPIVFEARS 36 (522)
Q Consensus 5 ~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~ 36 (522)
+|+|||+|..|.+.|..|++. |.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 799999999999999999985 78999999864
No 449
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.46 E-value=0.18 Score=45.30 Aligned_cols=37 Identities=32% Similarity=0.494 Sum_probs=31.5
Q ss_pred CCC-CcEEEECC-ChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 1 MEK-KQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 1 m~~-~~vvIIGa-G~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
|.. ++|+|+|| |.-|..++..|++.|.+|++++|++.
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 553 68999996 99999999999999999999998743
No 450
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.40 E-value=0.28 Score=44.99 Aligned_cols=35 Identities=26% Similarity=0.413 Sum_probs=31.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCC----ceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGF----HPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~----~v~i~e~~~ 36 (522)
|. ++|.|||+|.-|.+.|..|.+.|+ +|+++++++
T Consensus 1 M~-~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 1 MD-KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CC-CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CC-CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 43 689999999999999999999998 999999864
No 451
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=90.39 E-value=0.21 Score=47.07 Aligned_cols=36 Identities=22% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhc--CCceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~--g~~v~i~e~~~ 36 (522)
|..++|.|||+|.-|.+.|..|.+. +.+|+++|+++
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 5557899999999999999999987 57899998753
No 452
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.28 E-value=0.23 Score=50.28 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~ 35 (522)
.++|+|||+|..|...+..|.+.|.+|+|+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 478999999999999999999999999999975
No 453
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.28 E-value=0.23 Score=47.06 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=30.5
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|||+|.-|...|..|.+.|++|+++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999863
No 454
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.27 E-value=0.28 Score=46.50 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=30.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~ 35 (522)
.++|+|||+|..|..+|..|+..|.+|++++++
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 368999999999999999999999999999985
No 455
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=90.26 E-value=0.22 Score=47.23 Aligned_cols=33 Identities=36% Similarity=0.475 Sum_probs=30.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|.|||+|.-|...|..|.+.|++|+++|+++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 589999999999999999999999999999864
No 456
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.22 E-value=0.29 Score=43.69 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=29.7
Q ss_pred cEEEECC-ChhHHHHHHHHHhcCCceEEEecCC
Q 009917 5 QIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 5 ~vvIIGa-G~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+|+|+|| |.-|..++..|++.|.+|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 9999999999999999999999864
No 457
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.22 E-value=0.29 Score=46.28 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~ 35 (522)
.++|.|||+|..|..+|..|+..|.+|++++++
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 468999999999999999999999999999985
No 458
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.17 E-value=0.25 Score=47.30 Aligned_cols=32 Identities=34% Similarity=0.455 Sum_probs=29.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~ 35 (522)
.++|+|||+|.-|.+.|..|.+.|.+|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 468999999999999999999999999999 64
No 459
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=90.14 E-value=0.41 Score=48.83 Aligned_cols=40 Identities=15% Similarity=0.035 Sum_probs=32.6
Q ss_pred ceEeeeeEEEEEEcCCCCcccccccccCCCCCCCCCCCcEEEEEecCCCCceeEEEeCEEEEeeccc
Q 009917 95 HIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (522)
Q Consensus 95 ~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~d~lvvAtG~~ 161 (522)
.++++++|++|+..+ +.+.|++.++ +++.||+||+|+|..
T Consensus 272 ~i~~~~~V~~i~~~~----------------------~~v~v~~~~g-----~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 272 GYVFGCPVRSVVNER----------------------DAARVTARDG-----REFVAKRVVCTIPLN 311 (495)
T ss_dssp EEESSCCEEEEEECS----------------------SSEEEEETTC-----CEEEEEEEEECCCGG
T ss_pred EEEeCCEEEEEEEcC----------------------CEEEEEECCC-----CEEEcCEEEECCCHH
Confidence 589999999998754 3477877664 468999999999965
No 460
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.10 E-value=0.26 Score=47.17 Aligned_cols=36 Identities=11% Similarity=0.134 Sum_probs=27.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEccc
Q 009917 200 LVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (522)
Q Consensus 200 ~~~gk~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~ 239 (522)
.+..++|+|||+|..|.=+|..|++.+. +|+++ +++
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~---~V~l~-~~~ 51 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGH---EVILI-ARP 51 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTC---EEEEE-CCH
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCC---eEEEE-EcH
Confidence 4677899999999999999999998764 48888 644
No 461
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=89.86 E-value=0.33 Score=47.92 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=31.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.++|+|||+|..|..++..+.+.|++++++|..+.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 36899999999999999999999999999997653
No 462
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.85 E-value=0.24 Score=46.32 Aligned_cols=33 Identities=18% Similarity=0.144 Sum_probs=30.6
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~ 35 (522)
.++|+|||+|-+|.++|..|.+.|.+|+|++|+
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 468999999999999999999999999999986
No 463
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.85 E-value=0.24 Score=47.71 Aligned_cols=30 Identities=23% Similarity=0.319 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCCceEEEec
Q 009917 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEA 34 (522)
Q Consensus 5 ~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~ 34 (522)
+|+|||+|.-|.+.|..|.+.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 464
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=89.84 E-value=0.26 Score=49.74 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=32.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
|..++|+|||+|..|.++|..|++.|.+|++++|+.
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 666889999999999999999999999999999863
No 465
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.79 E-value=0.27 Score=46.55 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+++|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 466
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.75 E-value=0.28 Score=47.03 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=29.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC--ceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~ 36 (522)
++|+|||+|..|.++|..|+..|+ +++++|.+.
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 689999999999999999999887 799999753
No 467
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=89.65 E-value=0.29 Score=46.21 Aligned_cols=32 Identities=22% Similarity=0.466 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 5 ~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 468
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=89.64 E-value=0.32 Score=46.78 Aligned_cols=37 Identities=35% Similarity=0.460 Sum_probs=32.1
Q ss_pred CCCCcEEEECC-ChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 1 MEKKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 1 m~~~~vvIIGa-G~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
|..++|+|.|| |.-|..++..|++.|.+|++++|+..
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 66678999998 99999999999999999999998753
No 469
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.64 E-value=0.28 Score=45.87 Aligned_cols=34 Identities=21% Similarity=0.022 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC-ceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~~ 36 (522)
.++++|||+|-+|.+++..|.+.|. +|+|+.|+.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3689999999999999999999998 899999864
No 470
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.60 E-value=0.26 Score=47.22 Aligned_cols=33 Identities=33% Similarity=0.537 Sum_probs=29.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC--ceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~ 36 (522)
++|+|||+|..|.+.|..|.+.|+ +|+++|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 379999999999999999999998 899999853
No 471
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=89.59 E-value=0.18 Score=49.44 Aligned_cols=33 Identities=15% Similarity=0.007 Sum_probs=29.6
Q ss_pred EEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 205 RVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 205 ~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
.|+|||+|.+|+-+|..|++.+.+ |+++.|.+.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~---V~v~Er~~~ 38 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLK---TLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 599999999999999999998754 999998765
No 472
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=89.45 E-value=0.37 Score=45.46 Aligned_cols=36 Identities=17% Similarity=0.311 Sum_probs=32.3
Q ss_pred CcEEEECC-ChhHHHHHHHHHhcCCceEEEecCCCcc
Q 009917 4 KQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARSDIG 39 (522)
Q Consensus 4 ~~vvIIGa-G~aGl~~a~~l~~~g~~v~i~e~~~~~G 39 (522)
++|+|.|| |+-|-.++..|.++|++|+++.|++..+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~ 37 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG 37 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC
Confidence 47999998 9999999999999999999999876543
No 473
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.40 E-value=0.33 Score=45.98 Aligned_cols=33 Identities=30% Similarity=0.513 Sum_probs=30.7
Q ss_pred CcEEEEC-CChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVG-AGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIG-aG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+||| +|.-|.+.|..|.+.|++|+++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999999865
No 474
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.34 E-value=0.33 Score=45.39 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 5 ~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+|+|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998863
No 475
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.20 E-value=0.37 Score=43.12 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=29.8
Q ss_pred cEEEECC-ChhHHHHHHHHHhcCCceEEEecCC
Q 009917 5 QIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 5 ~vvIIGa-G~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+|+|+|| |.-|..++..|++.|.+|+++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 6999998 9999999999999999999999863
No 476
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=89.10 E-value=0.19 Score=49.28 Aligned_cols=34 Identities=18% Similarity=0.113 Sum_probs=29.8
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCceEEEEcccc
Q 009917 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (522)
Q Consensus 204 k~VvVIG~G~sg~dia~~l~~~~~~~~~Vt~v~r~~~ 240 (522)
++|+|||+|..|++.|..+++.+.. |+++.+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~---V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVP---VRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCc---EEEEeccCC
Confidence 4699999999999999999998754 999998764
No 477
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=89.05 E-value=0.39 Score=45.63 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=32.2
Q ss_pred CCcEEEECC-ChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGa-G~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.++|+|.|| |.-|..++..|++.|++|++++|+..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 478999999 99999999999999999999998754
No 478
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=89.02 E-value=0.33 Score=48.03 Aligned_cols=34 Identities=29% Similarity=0.307 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
-++|+|||.|..|..+|..|+..|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3789999999999999999999999999999753
No 479
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.00 E-value=0.32 Score=45.50 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=30.0
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~ 35 (522)
++|+|||+|-.|-++|..|.+.|.+|++++|+
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 68999999999999999999999999999885
No 480
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=88.97 E-value=0.19 Score=50.18 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=38.0
Q ss_pred CCcccccccCCcEEEeecC-ceeEec--CcEEEcCCCceecccEEEEecCCCCCccc
Q 009917 327 PEKFYDKVEEGSIILKKSQ-DFSFCE--DGIVVDGQTTPLKTDLVILATGFKGDVKL 380 (522)
Q Consensus 327 ~~~~~~~l~~g~v~v~~~~-i~~~~~--~gv~~~dG~~~~~~D~VI~aTG~~~~~~l 380 (522)
.+.+.+.+++.+++++.+. |+++.. ++++.++|++ +.+|.||+|+|......+
T Consensus 192 ~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~-~~ad~Vv~a~~~~~~~~l 247 (421)
T 3nrn_A 192 IDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEE-YSFDVAISNVGVRETVKL 247 (421)
T ss_dssp HHHHHHHHHTTTCEEESSCCEEEEETTTTEEEETTCCE-EECSEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcE-EEeCEEEECCCHHHHHHh
Confidence 3445566667678888775 888854 3465678877 999999999998754433
No 481
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=88.97 E-value=0.32 Score=45.65 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=29.4
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
++|+|||+|.-|...|..|.+ |++|+++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999999864
No 482
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.96 E-value=0.16 Score=46.23 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=29.7
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
+.+|+|||+|..|...|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 3689999999999999999999999 99999864
No 483
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=88.87 E-value=0.39 Score=49.04 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=31.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.+|.|||+|.-|...|..|.+.|++|+++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 6899999999999999999999999999998753
No 484
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=88.82 E-value=0.44 Score=45.77 Aligned_cols=33 Identities=21% Similarity=0.476 Sum_probs=29.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC--ceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~ 35 (522)
.++|+|||+|..|.+.|..|+..|+ +++++|.+
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 4689999999999999999999887 79999975
No 485
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=88.80 E-value=0.42 Score=45.15 Aligned_cols=36 Identities=28% Similarity=0.367 Sum_probs=31.7
Q ss_pred CC-CCcEEEECC-ChhHHHHHHHHHhcCCceEEEecCC
Q 009917 1 ME-KKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 1 m~-~~~vvIIGa-G~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
|. .++|+|+|| |.-|..++..|++.|++|+++.|+.
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 55 578999998 9999999999999999999999864
No 486
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=88.77 E-value=0.34 Score=44.83 Aligned_cols=32 Identities=13% Similarity=0.246 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHHhcC-CceEEEecCC
Q 009917 5 QIAIVGAGVSGLLACKYLLLKG-FHPIVFEARS 36 (522)
Q Consensus 5 ~vvIIGaG~aGl~~a~~l~~~g-~~v~i~e~~~ 36 (522)
+|.|||+|.-|...|..|.+.| .+|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 8999999853
No 487
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=88.73 E-value=0.41 Score=47.72 Aligned_cols=31 Identities=29% Similarity=0.461 Sum_probs=29.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC---ceEEEe
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF---HPIVFE 33 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~---~v~i~e 33 (522)
.++|+|+|||-+|.+++..|.+.|. +++|++
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 4689999999999999999999998 799999
No 488
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.64 E-value=0.4 Score=44.90 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=29.9
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC--ceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~ 36 (522)
++|+|||+|.-|.+.|..|.+.|+ +|+++|+++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 479999999999999999999998 899998753
No 489
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.63 E-value=0.46 Score=44.58 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=30.1
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC-ceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~ 35 (522)
.++|+|+|+|-+|-+++..|.+.|. +|+|++|+
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 4789999999999999999999998 69999885
No 490
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.59 E-value=0.41 Score=45.90 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=30.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC--ceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~ 36 (522)
.++|+|||+|..|.++|..|+..++ +++++|.+.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 4689999999999999999999887 799999853
No 491
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=88.59 E-value=0.34 Score=46.21 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=29.8
Q ss_pred CcEEEECCChhHHHHHHHHHhcC--CceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g--~~v~i~e~~~ 36 (522)
++|+|||+|.-|.+.|..|.+.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 48999999999999999999998 6899999853
No 492
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.59 E-value=0.43 Score=48.10 Aligned_cols=34 Identities=26% Similarity=0.196 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
-+.|+|+|+|..|.++|..|+..|.+|+++|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4789999999999999999999999999998753
No 493
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=88.59 E-value=0.4 Score=47.63 Aligned_cols=35 Identities=11% Similarity=0.246 Sum_probs=31.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHhcCCceEEEecCC
Q 009917 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (522)
Q Consensus 1 m~~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~ 36 (522)
|..++|+|||+|..|..++..+.+.|++++++| .+
T Consensus 22 m~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 22 WNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 345799999999999999999999999999999 54
No 494
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.57 E-value=0.34 Score=48.41 Aligned_cols=34 Identities=18% Similarity=0.343 Sum_probs=31.6
Q ss_pred CcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.++.|||.|.-|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4789999999999999999999999999999764
No 495
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.52 E-value=0.48 Score=45.16 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=30.3
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC-ceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~ 35 (522)
.++++|+|+|-+|-++|..|++.|. +|+|+.|+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 4689999999999999999999998 79999986
No 496
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=88.47 E-value=0.3 Score=48.02 Aligned_cols=34 Identities=15% Similarity=0.056 Sum_probs=31.1
Q ss_pred CcEEEECCChhHHHHHHHHHhcC-------CceEEEecCCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKG-------FHPIVFEARSD 37 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g-------~~v~i~e~~~~ 37 (522)
++|+|||+|.-|.+.|..|.+.| .+|+++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999998 89999998754
No 497
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=88.47 E-value=0.36 Score=45.57 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=29.7
Q ss_pred CcEEEECCChhHHHHHHHHHhcCC--ceEEEecCC
Q 009917 4 KQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (522)
Q Consensus 4 ~~vvIIGaG~aGl~~a~~l~~~g~--~v~i~e~~~ 36 (522)
++|+|||||.-|.+.|..|+..|+ +++++|+++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 379999999999999999999887 899999864
No 498
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.47 E-value=0.46 Score=46.28 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=29.8
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEec
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEA 34 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~ 34 (522)
.++|+|+|+|..|..+|..|.+.|.+|++.|+
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cCEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 47899999999999999999999999999885
No 499
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.45 E-value=0.48 Score=44.41 Aligned_cols=33 Identities=24% Similarity=0.121 Sum_probs=30.2
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCC-ceEEEecC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~-~v~i~e~~ 35 (522)
.++++|||+|-+|.+++..|.+.|. +|+|++|+
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 4689999999999999999999996 89999985
No 500
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=88.41 E-value=0.5 Score=46.44 Aligned_cols=35 Identities=23% Similarity=0.451 Sum_probs=31.9
Q ss_pred CCcEEEECCChhHHHHHHHHHhcCCceEEEecCCC
Q 009917 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (522)
Q Consensus 3 ~~~vvIIGaG~aGl~~a~~l~~~g~~v~i~e~~~~ 37 (522)
.++|+|||+|.-|..++..+.+.|++++++|..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 36899999999999999999999999999997654
Done!