BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009919
(522 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 145/460 (31%), Positives = 231/460 (50%), Gaps = 16/460 (3%)
Query: 4 LGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+G PA + +V+ V AR+A + W+ +S R +LR + I E ++ ++ +
Sbjct: 36 IGDIPAATAEDVEVAVVAARRAFRRNNWSATSGAHRATYLRAIAAKITEKKDHFVKLETI 95
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
D+GK +A L +I + + E + M K+ V PLGVVG
Sbjct: 96 DSGKPFDEAVL-DIDDVASCFEYFAGQAEALDGKQKAPVTLPMERFKSHVLRQPLGVVGL 154
Query: 122 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
I WNYP + A+ +G V+K SE AS + C F + VG P ++++
Sbjct: 155 ISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVT-CLEFGEV---CNEVGLPPGVLNI 210
Query: 182 ITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
+TG + G LVS VDKI F GS G +M +A++ + PVTLELGGK +V +DV
Sbjct: 211 LTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQLVKPVTLELGGKSPIVVFEDV 270
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
D+ V + + ++GQ C+ R VH I A FV ++ K K++ P +
Sbjct: 271 DIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGCRL 330
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFPPTVIVNVNHTMKLM 357
G + +K+ ++ A +GA IL GS HL +G Y PT++ +++ +M++
Sbjct: 331 GPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKG---YYIEPTIVTDISTSMQIW 387
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 417
+EE FGP++ + F++++E + LAND+ YGL AVFS R I ++ G +N
Sbjct: 388 KEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERITKALEVGAVWVN-- 445
Query: 418 ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457
S P+GG+K SGFGR G G++ +K V +D
Sbjct: 446 CSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQVTQD 485
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 235/463 (50%), Gaps = 23/463 (4%)
Query: 4 LGYFPALSRAEVDERV-----AQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEI 58
+G PA ++ +VD V A +RK + W+ +S R ++LR + I E ++ + ++
Sbjct: 36 IGDIPAATKEDVDLAVDAAKRAISRKNGRDWSAASGSLRARYLRAIAAKIKEKKDELGKL 95
Query: 59 SSRDTGKTMVDA--SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL 116
S D GK + +A L +++ E L E + K M K+ + P+
Sbjct: 96 ESIDCGKPLEEALADLDDVVACFEYYAGLAEELDSKQKAPI---SLPMDTFKSYILKEPI 152
Query: 117 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
GVV I WNYPF + A+ +G ++K SE AS + C I VG P
Sbjct: 153 GVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASVT-CLELGEI---CKEVGLPR 208
Query: 177 NLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
+++++TG E G +L S VDKI F GS G IM A++ + PV+LELGGK +
Sbjct: 209 GVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQLVKPVSLELGGKSPIV 268
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V +DVD+ VA+ V ++GQ C+ R VH I FV ++ K +++ PL
Sbjct: 269 VFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDPLE 328
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFPPTVIVNVNH 352
+G + +K+ N ++ A +GA IL G HL +G + PT+I +V
Sbjct: 329 EGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHLKKG---YFVEPTIITDVTT 385
Query: 353 TMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVA 412
+M++ +EE FGP++ + F+T+EE + LAND+ YGLG AV S R ++ +Q G+
Sbjct: 386 SMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAGIV 445
Query: 413 AINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
IN +++ P+GG+K SGFGR G GL VK V
Sbjct: 446 WINCAQPSFI--QAPWGGIKRSGFGRELGEWGLENYLSVKQVT 486
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 235/463 (50%), Gaps = 23/463 (4%)
Query: 4 LGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+G PA + +VD V ARKA + W ++ QR ++LR + ++E + ++ + S
Sbjct: 52 IGDIPAATAEDVDIAVEAARKAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESL 111
Query: 62 DTGKTMVDASLG-EIMTTCEKITWLLSEG--EKWLKPEYRSSGRSMIHKKAKVEFHPLGV 118
D+GKT+ +++ + + C + L+E + + P +S K+ V PLGV
Sbjct: 112 DSGKTLYESAADMDDVAGCFEYYAGLAEALDSRRMTPVNLNSD----SYKSYVLREPLGV 167
Query: 119 VGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
VG I WNYP + A+ +G ++K SE AS + C I +G P
Sbjct: 168 VGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASIT-CLELGEI---CREIGLPSGA 223
Query: 179 VDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235
++++TG E G L S VDKI F GS G IM A++ + PV+LELGGK +V
Sbjct: 224 LNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSPIVVF 283
Query: 236 DDVDVPHVA-QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 294
DD+D +A + + ++GQ C+ R V +I + F+ ++ K K++ PL
Sbjct: 284 DDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEE 343
Query: 295 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFPPTVIVNVNHT 353
+G + EK+ +++A +GA IL G HL +G Y PT+I +VN +
Sbjct: 344 DCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKG---YYVQPTIITDVNTS 400
Query: 354 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
M++ +EE FGP++ + F T+E+ ++LAND++YGLG AV S R Q G+
Sbjct: 401 MEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIW 460
Query: 414 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456
IN S LP+GG K SGFGR G GL +K V E
Sbjct: 461 IN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQVTE 501
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 228/462 (49%), Gaps = 19/462 (4%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKV-----WAKSSFKQRRQFLRILLKYIIEHQELICEI 58
+G PA ++ +VD VA A+ A WA +S R ++LR + + E + + ++
Sbjct: 36 IGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKL 95
Query: 59 SSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGV 118
S D GK + D + +I + EK + M K+ V P+GV
Sbjct: 96 ESIDCGKPL-DEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGV 154
Query: 119 VGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
VG I WNYP + A+ +G ++K SE AS + C I VG P +
Sbjct: 155 VGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLT-CLELGEI---CKEVGLPPGV 210
Query: 179 VDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235
++++TG E G L + VDK+ F GS G IM A++ + PV+LELGGK +V
Sbjct: 211 LNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVF 270
Query: 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGK 295
+DVD+ A+ A+ ++GQ C+ R +H I F++++ K +K++ PL
Sbjct: 271 EDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEG 330
Query: 296 YDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFPPTVIVNVNHTM 354
+G + EK+ V++A +GA IL GS HL +G + PT+I +V M
Sbjct: 331 CRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGF---FIEPTIITDVTTNM 387
Query: 355 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
++ +EE FGP++ + F+T+EE + LAND+ YGLG AV S R + + G+ +
Sbjct: 388 QIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWV 447
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456
N S P+GGVK SGFGR G GL VK V +
Sbjct: 448 N--CSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQ 487
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 220/432 (50%), Gaps = 21/432 (4%)
Query: 29 WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 88
W + +R + +K + E ++L ++ + +TG+ M + + +
Sbjct: 64 WPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGA 123
Query: 89 GEK--WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGI 146
+K W + S G+S++ ++ P+GVVGAIV+WN P N + A+ +G I
Sbjct: 124 ADKVTWTETRTGSYGQSIVSRE------PVGVVGAIVAWNVPLFLAVNKIAPALLAGCTI 177
Query: 147 VIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGS 204
V+K + + + A VG PE ++ V+ G ETG+AL S+ +D F GS
Sbjct: 178 VLKPAAETPLTA----NALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGS 233
Query: 205 PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 264
VGR + R A++ L P TLELGGK A I+ +DVD+ + V + + ++GQ C R
Sbjct: 234 SAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTR 293
Query: 265 FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEI 324
R Y V+ V V ++ GPP +G L + +++ + +++GA +
Sbjct: 294 ILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARL 353
Query: 325 LARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND 383
+ G EG + +F PTV +V++ M + QEE FGP++ I+ ++T+E+ + +AND
Sbjct: 354 VCGGG---RPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIAND 410
Query: 384 SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVE 443
S YGL +V++ + +I+ QI+ G IN +A + PFGG K+SG GR G E
Sbjct: 411 SVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYAFD---PGSPFGGYKNSGIGRENGPE 467
Query: 444 GLRACCLVKSVV 455
G+ KSV+
Sbjct: 468 GVEHFTQQKSVL 479
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 234/463 (50%), Gaps = 23/463 (4%)
Query: 4 LGYFPALSRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+G PA + +VD V ARKA + W ++ QR ++LR + ++E + ++ + S
Sbjct: 52 IGDIPAATAEDVDIAVEAARKAIARDDWGSTTGAQRAKYLRAIAAKVLEKKSVLATLESL 111
Query: 62 DTGKTMVDASLG-EIMTTCEKITWLLSEG--EKWLKPEYRSSGRSMIHKKAKVEFHPLGV 118
D+GKT+ +++ + + C + L+E + + P +S K+ V PLGV
Sbjct: 112 DSGKTLYESAADMDDVAGCFEYYAGLAEALDSRRMTPVNLNSD----SYKSYVLREPLGV 167
Query: 119 VGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
VG I WNYP + A+ +G ++K SE AS + C I +G P
Sbjct: 168 VGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASIT-CLELGEI---CREIGLPSGA 223
Query: 179 VDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235
++++TG E G L S VDKI F GS G IM A++ + PV+L LGGK +V
Sbjct: 224 LNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSPIVVF 283
Query: 236 DDVDVPHVA-QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 294
DD+D +A + + ++GQ C+ R V +I + F+ ++ K K++ PL
Sbjct: 284 DDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEE 343
Query: 295 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFPPTVIVNVNHT 353
+G + EK+ +++A +GA IL G HL +G Y PT+I +VN +
Sbjct: 344 DCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKG---YYVQPTIITDVNTS 400
Query: 354 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
M++ +EE FGP++ + F T+E+ ++LAND++YGLG AV S R Q G+
Sbjct: 401 MEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGIIW 460
Query: 414 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456
IN S LP+GG K SGFGR G GL +K V E
Sbjct: 461 IN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQVTE 501
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 221/438 (50%), Gaps = 14/438 (3%)
Query: 23 RKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKI 82
R + WA++ R ++LR + +IE + + ++ + D GK +A+ ++
Sbjct: 77 RNRGRDWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAW-DMDDVAGCF 135
Query: 83 TWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFS 142
+ + E K + M K + P+GVVG I WNYP + A+ +
Sbjct: 136 EYFADQAEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAA 195
Query: 143 GNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS---VDKI 199
G V+K SE AS + C I VG P +++++TG A +S+ VDK+
Sbjct: 196 GCTAVLKPSELASVT-CLELADI---CKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKV 251
Query: 200 IFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 259
F GS G+ IM +A+ + PVTLELGGK +V DDVD+ + + ++GQ C
Sbjct: 252 AFTGSFETGKKIMASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQIC 311
Query: 260 AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 319
+ R +H I F ++ K++ PL +G + EK++ +++A
Sbjct: 312 SATSRLLIHTKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKS 371
Query: 320 KGAEILARG-SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV 378
+GA IL G HL +G + PT+I ++ +M++ +EE FGP++ + +F+T++E +
Sbjct: 372 QGATILTGGVRPAHLEKGF---FIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAI 428
Query: 379 KLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 438
+LAND++YGL AV SG + R + ++ +I G +N + CQ+ P+GG K SGFGR
Sbjct: 429 ELANDTQYGLAGAVISGDRERCQRLSEEIDAGCIWVN-CSQPCFCQA-PWGGNKRSGFGR 486
Query: 439 FAGVEGLRACCLVKSVVE 456
G G+ VK V E
Sbjct: 487 ELGEGGIDNYLSVKQVTE 504
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 227/457 (49%), Gaps = 27/457 (5%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG P + AE + A+ A W + K+R LR +I + + + I + +
Sbjct: 41 LGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQ 100
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSM----IHKKAKVEFHPLGVV 119
GK + +A GEI I W EG+ R +G ++ +K+ V P+GV
Sbjct: 101 GKPLAEAK-GEIAYAASFIEWFAEEGK-------RVAGDTLPTPDANKRIVVVKEPIGVC 152
Query: 120 GAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 179
AI WN+P I + A+ +G IV+K +E+ +S + + A G P+ ++
Sbjct: 153 AAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERA----GVPKGVL 208
Query: 180 DVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236
V+ G + G + S+ V K+ F GS VGR++M ++ T+ +TLELGG FIV D
Sbjct: 209 SVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFD 268
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ + A+ + +++GQ C RF+VH +Y F ++A V + G
Sbjct: 269 DADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGA 328
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
+G L +K+++ + DAL KGA ++ G L G +F PTV+ V M +
Sbjct: 329 TLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHG----FFEPTVLTGVKPDMDV 384
Query: 357 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 416
+EE FGP+ P+ +F ++EE+V+LAND+ +GL ++S R +A ++ G+ IN
Sbjct: 385 AKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINT 444
Query: 417 -FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 452
SN + PFGGVK SG GR G+ ++K
Sbjct: 445 GLISNEVA---PFGGVKQSGLGREGSHYGIDDYVVIK 478
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 225/454 (49%), Gaps = 23/454 (5%)
Query: 11 SRAEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
++ + + + AR+A W++ + + R + +R + I EH+E + + + DTGKT+
Sbjct: 68 TKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLE 127
Query: 69 D--ASLGEIMTTCEKITWLLSE--GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 124
+ A + +I L + GE P + ++K+ P+GVV I
Sbjct: 128 ESYADMDDIHNVFMYFAGLADKDGGEMIDSP--------IPDTESKIVKEPVGVVTQITP 179
Query: 125 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 184
WNYP + A+ +G +V+K SE + F +++ VG P+ +++I G
Sbjct: 180 WNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEE----VGFPKGTINLILG 235
Query: 185 F-AETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 241
+E G+ + VD + F G G+ IM+NA+ +T + LELGGK+ I+ DD D
Sbjct: 236 AGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFE 295
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
A+ +GQ C+ R V I F + VK + G +MG +
Sbjct: 296 LAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPV 355
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
EH K+++ ++ A +GA I G + +F PTVI N + +M+++QEE
Sbjct: 356 ISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEV 415
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP++ + F T++E ++LANDS YGL AVFS +A+ +A +++ G INDF Y
Sbjct: 416 FGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHP-Y 474
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
Q+ P+GG K SG GR G EGL + K ++
Sbjct: 475 FAQA-PWGGYKQSGIGRELGKEGLEEYLVSKHIL 507
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 214/432 (49%), Gaps = 15/432 (3%)
Query: 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 73
EVD+ V A+ A W+K + +R + + + I E ++ I ++ + GKT+ +A
Sbjct: 59 EVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY- 117
Query: 74 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 133
+I + I + + G + + + + PLGV I++WNYPF
Sbjct: 118 DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRRE----PLGVCAGILAWNYPFMIAA 173
Query: 134 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALV 193
A+ GN +V K S +G I A G P LV+V+ G AETG L
Sbjct: 174 WKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEA----GVPVGLVNVVQGGAETGSLLC 229
Query: 194 --SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAA 251
+V K+ F GS G+ +M ++KT+ VTLELGGK ++ D ++ + + A+ A
Sbjct: 230 HHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMAN 289
Query: 252 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311
+ GQ C R +V R+I F+ +V K K++ G PL + MG L +K+
Sbjct: 290 FLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVL 349
Query: 312 NLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIM 369
V A +GA +L G S+ + + P V+ N M ++EE FGP+M ++
Sbjct: 350 GFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409
Query: 370 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFG 429
F+T+EEV++ AN++ +GL VF+ RA +AA ++ G IN ++ + + +PFG
Sbjct: 410 PFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPV--EVPFG 467
Query: 430 GVKDSGFGRFAG 441
G K SGFGR G
Sbjct: 468 GYKMSGFGRENG 479
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 219/455 (48%), Gaps = 28/455 (6%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
SR +V+ V A + QKVWA + QR + LR + + E + + + + DTGK + +
Sbjct: 42 SREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAET 101
Query: 71 SLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 125
+I+T + + + EGE+ E S ++ + + PLGVV I +W
Sbjct: 102 RSVDIVTGADVLEYYAGLVPAIEGEQIPLRET-----SFVYTRRE----PLGVVAGIGAW 152
Query: 126 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
NYP A+ +GN ++ K SE + I A G P+ + +V+TG
Sbjct: 153 NYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----GVPDGVFNVLTGS 208
Query: 186 A-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 241
E G+ L ++KI F G G+ +M +AS + L VT+ELGGK I+ D D+
Sbjct: 209 GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLD 268
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
A IAV A SSGQ C R ++HR A F ++V + V+ + G P + G L
Sbjct: 269 RAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPL 328
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQE 359
H E + + + A +L G +++GA + Y PTV + M +++E
Sbjct: 329 VSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVFTDCRDDMTIVRE 386
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E FGP+M I+ ++ ++E ++ AND+ YGL V + RA +++ G+ IN +
Sbjct: 387 EIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE 446
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ +P GG K SG GR G+ L +KSV
Sbjct: 447 S--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 217/442 (49%), Gaps = 25/442 (5%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG P + E + A +A W + K+R LR ++EHQ+ + + + +
Sbjct: 38 LGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQ 97
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVG 120
GK + +A GEI I W EG++ P +++ R ++ K+ P+GV
Sbjct: 98 GKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ------PIGVTA 150
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AI WN+P I A+ +G +V+K + +S + + A+ A G P + +
Sbjct: 151 AITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA---LALAELAIRA-GVPAGVFN 206
Query: 181 VITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
V+TG A G L S+ V K+ F GS +GR +M +K + V+LELGG FIV DD
Sbjct: 207 VVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDD 266
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
D+ + A+ + +++GQ C A R YV +Y F ++ + + + G L
Sbjct: 267 ADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVT 326
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 357
+G L + K++ + DAL+KGA ++ G H G +F PT++V+V K+
Sbjct: 327 IGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHERGG---NFFQPTILVDVPANAKVS 382
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND- 416
+EE FGP+ P+ +F + +V+ AND+ +GL ++ R + ++ G+ IN
Sbjct: 383 KEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTG 442
Query: 417 FASNYMCQSLPFGGVKDSGFGR 438
SN + PFGG+K SG GR
Sbjct: 443 IISNEVA---PFGGIKASGLGR 461
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 217/442 (49%), Gaps = 25/442 (5%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG P + E + A +A W + K+R LR ++EHQ+ + + + +
Sbjct: 38 LGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQ 97
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVG 120
GK + +A GEI I W EG++ P +++ R ++ K+ P+GV
Sbjct: 98 GKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQ------PIGVTA 150
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AI WN+P I A+ +G +V+K + +S + + A+ A G P + +
Sbjct: 151 AITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA---LALAELAIRA-GVPAGVFN 206
Query: 181 VITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
V+TG A G L S+ V K+ F GS +GR +M +K + V+LELGG FIV DD
Sbjct: 207 VVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDD 266
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
D+ + A+ + +++GQ C A R YV +Y F ++ + + + G L
Sbjct: 267 ADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVT 326
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 357
+G L + K++ + DAL+KGA ++ G H G +F PT++V+V K+
Sbjct: 327 IGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHERGG---NFFQPTILVDVPANAKVS 382
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND- 416
+EE FGP+ P+ +F + +V+ AND+ +GL ++ R + ++ G+ IN
Sbjct: 383 KEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTG 442
Query: 417 FASNYMCQSLPFGGVKDSGFGR 438
SN + PFGG+K SG GR
Sbjct: 443 IISNEVA---PFGGIKASGLGR 461
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 219/455 (48%), Gaps = 28/455 (6%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
SR +V+ V A + QKVWA + QR + LR + + E + + + + DTGK + +
Sbjct: 41 SREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAET 100
Query: 71 SLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 125
+I+T + + + EGE+ E S ++ + + PLGVV I +W
Sbjct: 101 RSVDIVTGADVLEYYAGLVPAIEGEQIPLRET-----SFVYTRRE----PLGVVAGIGAW 151
Query: 126 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
NYP A+ +GN ++ K SE + I A G P+ + +V+TG
Sbjct: 152 NYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----GVPDGVFNVLTGS 207
Query: 186 A-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 241
E G+ L ++KI F G G+ +M +AS + L VT+ELGGK I+ D D+
Sbjct: 208 GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLD 267
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
A IAV A SSGQ C R ++HR A F ++V + V+ + G P + G L
Sbjct: 268 RAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPL 327
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQE 359
H E + + + A +L G +++GA + Y PTV + M +++E
Sbjct: 328 VSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVFTDCRDDMTIVRE 385
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E FGP+M I+ ++ ++E ++ AND+ YGL V + RA +++ G+ IN +
Sbjct: 386 EIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE 445
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ +P GG K SG GR G+ L +KSV
Sbjct: 446 S--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 218/455 (47%), Gaps = 28/455 (6%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
SR +V+ V A + QKVWA + QR + LR + + E + + + + DTGK + +
Sbjct: 41 SREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAET 100
Query: 71 SLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 125
+I+T + + + EGE+ E S ++ + + PLGVV I +W
Sbjct: 101 RSVDIVTGADVLEYYAGLVPAIEGEQIPLRET-----SFVYTRRE----PLGVVAGIGAW 151
Query: 126 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
NYP A+ +GN ++ K SE + I A G P+ + +V+TG
Sbjct: 152 NYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----GVPDGVFNVLTGS 207
Query: 186 A-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 241
E G+ L ++KI F G G+ +M +AS + L VT+ LGGK I+ D D+
Sbjct: 208 GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLIIFPDADLD 267
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
A IAV A SSGQ C R ++HR A F ++V + V+ + G P + G L
Sbjct: 268 RAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPL 327
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQE 359
H E + + + A +L G +++GA + Y PTV + M +++E
Sbjct: 328 VSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVFTDCRDDMTIVRE 385
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E FGP+M I+ ++ ++E ++ AND+ YGL V + RA +++ G+ IN +
Sbjct: 386 EIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE 445
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ +P GG K SG GR G+ L +KSV
Sbjct: 446 S--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 220/454 (48%), Gaps = 29/454 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG PALS+ EV++ + A+ AQK+W +R L + E +E+I E+ +
Sbjct: 40 LGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEV 99
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKW----LKPEYRSSGRSMIHKKAKVEFHPLGVV 119
K +++GE+ T + I E + LK + G S K A VE PLGVV
Sbjct: 100 AKPK-KSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSS--KKIALVEREPLGVV 156
Query: 120 GAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLV 179
AI +NYP + + A+ +GN +V K + S SG ALA GAPE ++
Sbjct: 157 LAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVE----ALADAGAPEGII 212
Query: 180 DVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236
V+TG G+ LV +D I F G G I A + PV LELGGKD IV D
Sbjct: 213 QVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLD 270
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ A V A SGQ C +R +V + V+ + ++V+ ++ G P
Sbjct: 271 DADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSP-EDDA 329
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
D+ + + + +Q L++DAL+ GA +L+ G+ +G PT++ +V M++
Sbjct: 330 DITPVIDEKSAAFIQGLIDDALENGATLLS----GNKRQG---NLLSPTLLDDVTPAMRV 382
Query: 357 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 416
EE FGP++PI++ E + L+N S YGL ++F+ RA I ++ G IN
Sbjct: 383 AWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHIN- 441
Query: 417 FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 450
+ PF GVK SG GV+G++ L
Sbjct: 442 AKTERGPDHFPFLGVKKSGL----GVQGIKPSLL 471
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 218/455 (47%), Gaps = 28/455 (6%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
SR +V+ V A + QKVWA + QR + LR + + E + + + + DTGK + +
Sbjct: 42 SREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAET 101
Query: 71 SLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 125
+I+T + + + EGE+ E S ++ + + PLGVV I +W
Sbjct: 102 RSVDIVTGADVLEYYAGLVPAIEGEQIPLRET-----SFVYTRRE----PLGVVAGIGAW 152
Query: 126 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
NYP A+ +GN ++ K SE + I A G P+ + +V+TG
Sbjct: 153 NYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----GVPDGVFNVLTGS 208
Query: 186 A-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 241
E G+ L ++KI F G G+ +M +AS + L VT+ELGGK I+ D D+
Sbjct: 209 GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLD 268
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
A IAV A SSGQ R ++HR A F ++V + V+ + G P + G L
Sbjct: 269 RAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPL 328
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQE 359
H E + + + A +L G +++GA + Y PTV + M +++E
Sbjct: 329 VSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVFTDCRDDMTIVRE 386
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E FGP+M I+ ++ ++E ++ AND+ YGL V + RA +++ G+ IN +
Sbjct: 387 EIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE 446
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ +P GG K SG GR G+ L +KSV
Sbjct: 447 S--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 218/455 (47%), Gaps = 28/455 (6%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
SR +V+ V A + QKVWA + QR + LR + + E + + + + DTGK + +
Sbjct: 42 SREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAET 101
Query: 71 SLGEIMTTCEKITWLLS-----EGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 125
+I+T + + + EGE+ E S ++ + + PLGVV I +W
Sbjct: 102 RSVDIVTGADVLEYYAGLVPAIEGEQIPLRET-----SFVYTRRE----PLGVVAGIGAW 152
Query: 126 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
NYP A+ +GN ++ K SE + I A G P+ + +V+TG
Sbjct: 153 NYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----GVPDGVFNVLTGS 208
Query: 186 A-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVP 241
E G+ L ++KI F G G+ +M +AS + L VT+ELGGK I+ D D+
Sbjct: 209 GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLD 268
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
A IAV A SSGQ R ++HR A F ++V + V+ + G P + G L
Sbjct: 269 RAADIAVMANFFSSGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPL 328
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQE 359
H E + + + A +L G +++GA + Y PTV + M +++E
Sbjct: 329 VSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVFTDCRDDMTIVRE 386
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E FGP+M I+ ++ ++E ++ AND+ YGL V + RA +++ G+ IN +
Sbjct: 387 EIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE 446
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
+ +P GG K SG GR G+ L +KSV
Sbjct: 447 S--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 232/464 (50%), Gaps = 31/464 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG PA+S EVD A A+KAQ W S+ +R +L + ++ +E I I S++
Sbjct: 31 LGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEV 90
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK---VEFHPLGVVG 120
K +++ E++ T E I + EG + ++ E G K K V P+G+V
Sbjct: 91 AKGY-KSAVSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASKKKIAVVRREPVGLVL 148
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AI +NYP + + + A+ +GN I K S SG ++ A A G P + +
Sbjct: 149 AISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LLAEAFAEAGLPAGVFN 204
Query: 181 VITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
ITG +E G+ +V +V+ I F GS G+G I + A + P+ LELGGKD+ IV +D
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLED 262
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
D+ A+ + A SGQ C +R V + V ++ + V +++ G P D
Sbjct: 263 ADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDAD 321
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 357
+ L + ++ ++ L+NDA DKGA L EG P + V M+L
Sbjct: 322 ITPLIDTKSADYVEGLINDANDKGATALTEIK----REG---NLICPILFDKVTTDMRLA 374
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 417
EE FGP++PI++ + EE ++++N S YGL ++F+ RA IA Q++ G IN+
Sbjct: 375 WEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN- 433
Query: 418 ASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 457
+ + PF G K SG AG++G++ A VKSVV D
Sbjct: 434 KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 232/464 (50%), Gaps = 31/464 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG PA+S EVD A A+KAQ W S+ +R +L + ++ +E I I S++
Sbjct: 31 LGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEV 90
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK---VEFHPLGVVG 120
K +++ E++ T E I + EG + ++ E G K K V P+G+V
Sbjct: 91 AKGY-KSAVSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASKKKIAVVRREPVGLVL 148
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AI +NYP + + + A+ +GN I K S SG ++ A A G P + +
Sbjct: 149 AISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LLAEAFAEAGLPAGVFN 204
Query: 181 VITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
ITG +E G+ +V +V+ I F GS G+G I + A + P+ LELGGKD+ IV +D
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLED 262
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
D+ A+ + A SGQ C +R V + V ++ + V +++ G P D
Sbjct: 263 ADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDAD 321
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 357
+ L + ++ ++ L+NDA DKGA L EG P + V M+L
Sbjct: 322 ITPLIDTKSADYVEGLINDANDKGATALTEIK----REG---NLICPILFDKVTTDMRLA 374
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 417
EE FGP++PI++ + EE ++++N S YGL ++F+ RA IA Q++ G IN+
Sbjct: 375 WEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN- 433
Query: 418 ASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 457
+ + PF G K SG AG++G++ A VKSVV D
Sbjct: 434 KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 218/454 (48%), Gaps = 25/454 (5%)
Query: 11 SRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+ +VD+ V AR A ++ W + R + L L I + + + + D GK
Sbjct: 55 DKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPY 114
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
V + L ++ + + + +K+ G + + P+GV G I+ WN+
Sbjct: 115 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HEPVGVCGQIIPWNF 170
Query: 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
P + A+ +GN +V+KV+E + + +I+ A G P +V+++ GF
Sbjct: 171 PLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNIVPGFGP 226
Query: 188 TGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHV 243
T A ++S VDK+ F GS +GR+I A S L VTL+LGGK I+ D D+
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWA 286
Query: 244 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303
+ A A + GQ+C+ R +V DIY FV + KS G P K + G
Sbjct: 287 VEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVD 346
Query: 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEA 361
+K+ +N +GA++L G A D+ + PTV +V M + +EE
Sbjct: 347 ETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFGDVQDGMTIAKEEI 400
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +Q G +N + +
Sbjct: 401 FGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY-DVF 459
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
QS PFGG K SG GR G GL+A VK+V
Sbjct: 460 GAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/454 (31%), Positives = 216/454 (47%), Gaps = 25/454 (5%)
Query: 11 SRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+ +VD+ V AR A ++ W + R + L L I + + + + D GK
Sbjct: 49 DKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPY 108
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
V + L ++ + + + +K+ G + + P+GV G I+ WN+
Sbjct: 109 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HEPVGVCGQIIPWNF 164
Query: 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
P + A+ +GN +V+KV+E + + +I+ A G P +V+++ GF
Sbjct: 165 PLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNIVPGFGP 220
Query: 188 TGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHV 243
T A ++S VDK+ F GS +GR+I A S L VTLELGGK I+ D D+
Sbjct: 221 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 280
Query: 244 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303
+ A A + GQ C R +V DIY FV + KS G P K + G
Sbjct: 281 VEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVD 340
Query: 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEA 361
+K+ +N +GA++L G A D+ + PTV +V M + +EE
Sbjct: 341 ETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFGDVQDGMTIAKEEI 394
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +Q G +N + +
Sbjct: 395 FGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY-DVF 453
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
QS PFGG K SG GR G GL+A VK+V
Sbjct: 454 GAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 486
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 231/464 (49%), Gaps = 31/464 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG PA+S EVD A A+KAQ W S+ +R +L + ++ +E I I S++
Sbjct: 31 LGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEV 90
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK---VEFHPLGVVG 120
K +++ E++ T E I + EG + ++ E G K K V P+G+V
Sbjct: 91 AKGY-KSAVSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASKKKIAVVRREPVGLVL 148
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AI +NYP + + + A+ +GN I K S SG ++ A A G P + +
Sbjct: 149 AISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LLAEAFAEAGLPAGVFN 204
Query: 181 VITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
ITG +E G+ +V +V+ I F GS G+G I + A + P+ L LGGKD+ IV +D
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLALGGKDSAIVLED 262
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
D+ A+ + A SGQ C +R V + V ++ + V +++ G P D
Sbjct: 263 ADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDAD 321
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 357
+ L + ++ ++ L+NDA DKGA L EG P + V M+L
Sbjct: 322 ITPLIDTKSADYVEGLINDANDKGATALTEIK----REG---NLICPILFDKVTTDMRLA 374
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 417
EE FGP++PI++ + EE ++++N S YGL ++F+ RA IA Q++ G IN+
Sbjct: 375 WEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN- 433
Query: 418 ASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 457
+ + PF G K SG AG++G++ A VKSVV D
Sbjct: 434 KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/454 (31%), Positives = 216/454 (47%), Gaps = 25/454 (5%)
Query: 11 SRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+ +VD+ V AR A ++ W + R + L L I + + + + D GK
Sbjct: 55 DKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPY 114
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
V + L ++ + + + +K+ G + + P+GV G I+ WN+
Sbjct: 115 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HEPVGVCGQIIPWNF 170
Query: 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
P + A+ +GN +V+KV+E + + +I+ A G P +V+++ GF
Sbjct: 171 PLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNIVPGFGP 226
Query: 188 TGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHV 243
T A ++S VDK+ F GS +GR+I A S L VTLELGGK I+ D D+
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303
+ A A + GQ C R +V DIY FV + KS G P K + G
Sbjct: 287 VEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVD 346
Query: 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEA 361
+K+ +N +GA++L G A D+ + PTV +V M + +EE
Sbjct: 347 ETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFGDVQDGMTIAKEEI 400
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +Q G +N + +
Sbjct: 401 FGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY-DVF 459
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
QS PFGG K SG GR G GL+A VK+V
Sbjct: 460 GAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/454 (31%), Positives = 216/454 (47%), Gaps = 25/454 (5%)
Query: 11 SRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+ +VD+ V AR A ++ W + R + L L I + + + + D GK
Sbjct: 55 DKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPY 114
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
V + L ++ + + + +K+ G + + P+GV G I+ WN+
Sbjct: 115 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HEPVGVCGQIIPWNF 170
Query: 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
P + A+ +GN +V+KV+E + + +I+ A G P +V+++ GF
Sbjct: 171 PLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNIVPGFGP 226
Query: 188 TGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHV 243
T A ++S VDK+ F GS +GR+I A S L VTLELGGK I+ D D+
Sbjct: 227 TAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303
+ A A + GQ C R +V DIY FV + KS G P K + G
Sbjct: 287 VEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVD 346
Query: 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEA 361
+K+ +N +GA++L G A D+ + PTV +V M + +EE
Sbjct: 347 ETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFGDVQDGMTIAKEEI 400
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +Q G +N + +
Sbjct: 401 FGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY-DVF 459
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
QS PFGG K SG GR G GL+A VK+V
Sbjct: 460 GAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 231/464 (49%), Gaps = 31/464 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
LG PA+S EVD A A+KAQ W S+ +R +L + ++ +E I I S++
Sbjct: 31 LGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEV 90
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAK---VEFHPLGVVG 120
K +++ E++ T E I + EG + ++ E G K K V P+G+V
Sbjct: 91 AKGY-KSAVSEVVRTAEIINYAAEEGLR-MEGEVLEGGSFEAASKKKIAVVRREPVGLVL 148
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AI +NYP + + + A+ +GN I K S SG ++ A A G P + +
Sbjct: 149 AISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LLAEAFAEAGLPAGVFN 204
Query: 181 VITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
ITG +E G+ +V +V+ I F GS G+G I + A + P+ LELGGKD+ IV +D
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLED 262
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
D+ A+ + A SGQ +R V + V ++ + V +++ G P D
Sbjct: 263 ADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELVEKIREKVLALTIGNP-EDDAD 321
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 357
+ L + ++ ++ L+NDA DKGA L EG P + V M+L
Sbjct: 322 ITPLIDTKSADYVEGLINDANDKGATALTEIK----REG---NLICPILFDKVTTDMRLA 374
Query: 358 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 417
EE FGP++PI++ + EE ++++N S YGL ++F+ RA IA Q++ G IN+
Sbjct: 375 WEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN- 433
Query: 418 ASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 457
+ + PF G K SG AG++G++ A VKSVV D
Sbjct: 434 KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 216/454 (47%), Gaps = 25/454 (5%)
Query: 11 SRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+ +VD+ V AR A ++ W + R + L L I + + + + D GK
Sbjct: 55 DKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPY 114
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
V + L ++ + + + +K+ G + + P+GV G I+ WN+
Sbjct: 115 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HEPVGVCGQIIPWNF 170
Query: 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
P + A+ +GN +V+KV+E + + +I+ A G P +V+++ GF
Sbjct: 171 PLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNIVPGFGP 226
Query: 188 TGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHV 243
T A ++S VDK+ F GS +GR+I A S L VTLELGGK I+ D D+
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303
+ A A + GQ C R +V DIY FV + KS G P K + G
Sbjct: 287 VEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVD 346
Query: 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEA 361
+K+ +N +GA++L G A D+ + PTV +V M + +EE
Sbjct: 347 ETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFGDVQDGMTIAKEEI 400
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +Q G +N + +
Sbjct: 401 FGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY-DVF 459
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
QS PFGG K SG G+ G GL+A VK+V
Sbjct: 460 GAQS-PFGGYKMSGSGQELGEYGLQAYTEVKTVT 492
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 218/454 (48%), Gaps = 25/454 (5%)
Query: 11 SRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+A+VD V AR A ++ W + +R + L L I + + + + D GK
Sbjct: 54 DKADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPY 113
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
+ + L ++ + + + +K+ G + + P+GV G I+ WN+
Sbjct: 114 IISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTR----HEPVGVCGQIIPWNF 169
Query: 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
P + A+ +GN +V+KV+E + + +I+ A G P +V+VI GF
Sbjct: 170 PLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNVIPGFGP 225
Query: 188 TGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHV 243
T A ++S VDK+ F GS VG +I A K+ L VTLE+GGK I+ D D+
Sbjct: 226 TAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWA 285
Query: 244 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303
+ A A + GQ C R +V DIYA FV + KS G P + + G
Sbjct: 286 VEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVD 345
Query: 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEA 361
+K+ + ++G ++L G A D+ + PTV ++ M + +EE
Sbjct: 346 ETQFKKVLGYIKSGKEEGLKLLCGGG------AAADRGYFIQPTVFGDLQDGMTIAKEEI 399
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+M I+KF + EEVV AN+S+YGL AVF+ +A ++ +Q G +N + +
Sbjct: 400 FGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY-DVF 458
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
QS PFGG K SG GR G GL+A VK+V
Sbjct: 459 GAQS-PFGGYKLSGSGRELGEYGLQAYTEVKTVT 491
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 220/455 (48%), Gaps = 27/455 (5%)
Query: 11 SRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+ +VD+ V AR A ++ W + R + L L I + + + + D GK
Sbjct: 55 DKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPY 114
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
V + L ++ + + + +K+ G + + P+GV G I+ WN+
Sbjct: 115 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HEPVGVCGQIIPWNF 170
Query: 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
P + A+ +GN +V+KV+E + + +I+ A G P +V+++ GF
Sbjct: 171 PLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNIVPGFGP 226
Query: 188 TGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHV 243
T A ++S VDK+ F GS +GR+I A S L VTLELGGK I+ D D+
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 AQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 302
+ A A + GQ +CAG+ R +V DIY FV + KS G P K + G
Sbjct: 287 VEQAHFALFFNQGQCSCAGS-RTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 303 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEE 360
+K+ +N +GA++L G A D+ + PTV +V M + +EE
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFGDVQDGMTIAKEE 399
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +Q G +N +
Sbjct: 400 IFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY-DV 458
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ QS PFGG K SG GR G GL+A VK+V
Sbjct: 459 FGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 219/455 (48%), Gaps = 27/455 (5%)
Query: 11 SRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+ +VD+ V AR A ++ W + R + L L I + + + + D GK
Sbjct: 55 DKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPY 114
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
V + L ++ + + + +K+ G + + P+GV G I+ WN+
Sbjct: 115 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HEPVGVCGQIIPWNF 170
Query: 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
P + A+ +GN +V+KV+E + + +I+ A G P +V+++ GF
Sbjct: 171 PLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNIVPGFGP 226
Query: 188 TGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHV 243
T A ++S VDK+ F GS +GR+I A S L VTLELGGK I+ D D+
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 AQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 302
+ A A + GQ CAG+ R +V DIY FV + KS G P K + G
Sbjct: 287 VEQAHFALFFNQGQCXCAGS-RTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 303 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEE 360
+K+ +N +GA++L G A D+ + PTV +V M + +EE
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFGDVQDGMTIAKEE 399
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +Q G +N +
Sbjct: 400 IFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY-DV 458
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ QS PFGG K SG GR G GL+A VK+V
Sbjct: 459 FGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 212/446 (47%), Gaps = 25/446 (5%)
Query: 11 SRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+ +VD+ V AR A ++ W + R + L L I + + + + D GK
Sbjct: 55 DKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPY 114
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
V + L ++ + + + +K+ G + + P+GV G I+ WN+
Sbjct: 115 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HEPVGVCGQIIPWNF 170
Query: 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
P + A+ +GN +V+KV+E + + +I+ A G P +V+++ GF
Sbjct: 171 PLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNIVPGFGP 226
Query: 188 TGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHV 243
T A ++S VDK+ F GS +GR+I A S L VTLELGGK I+ D D+
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 AQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303
+ A A + GQ C R +V DIY FV + KS G P K + G
Sbjct: 287 VEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVD 346
Query: 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEA 361
+K+ +N +GA++L G A D+ + PTV +V M + +EE
Sbjct: 347 ETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFGDVQDGMTIAKEEI 400
Query: 362 FGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 421
FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +Q G +N + +
Sbjct: 401 FGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY-DVF 459
Query: 422 MCQSLPFGGVKDSGFGRFAGVEGLRA 447
QS PFGG K SG GR G GL+A
Sbjct: 460 GAQS-PFGGYKMSGSGRELGEYGLQA 484
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 215/474 (45%), Gaps = 27/474 (5%)
Query: 9 ALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
A + A V+ +A A++AQK WA S R + L+ + E + + + + DTGK +
Sbjct: 48 AATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQ 107
Query: 69 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
+ + + + + + L +Y G + K PLGV I +WNYP
Sbjct: 108 ETIVADPTSGADAFEFFGGIAPSALNGDYIPLGGDFAYTKRV----PLGVCVGIGAWNYP 163
Query: 129 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 188
A+ +GN +V K SEN I+ A G P+ L +VI G +T
Sbjct: 164 QQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEA----GLPKGLFNVIQGDRDT 219
Query: 189 GEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 246
G LV+ D K+ GS GR + A+ L VT+ELGGK IV DD D+
Sbjct: 220 GPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGG 279
Query: 247 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 306
A+ SSGQ C+ R +V + A F+ + + +++ G PL +G L
Sbjct: 280 AMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQ 339
Query: 307 SEKLQNLVNDALDKGAEILARGSFGH--LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 364
EK+ + + +GA ++ G + EGA Y PTV +V M + +EE FGP
Sbjct: 340 QEKVLSYIEKGKAEGATLITGGGIPNNVAGEGA---YVQPTVFADVTDDMTIAREEIFGP 396
Query: 365 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 424
+M ++ F+ ++EV+ AN + +GL VF+ RA + ++ G IN + N
Sbjct: 397 VMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTY--NLCPV 454
Query: 425 SLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN 478
+PFGG K SGFGR L +K+V Y+ T + P AEN
Sbjct: 455 EIPFGGSKQSGFGRENSAAALEHYSELKTV-------YVST---GKVDAPYAEN 498
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 216/468 (46%), Gaps = 32/468 (6%)
Query: 15 VDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGE 74
+ + V +AR+A S + R Q L L + I E+ + I + D GK + E
Sbjct: 3 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 62
Query: 75 IMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 134
+ E++ + E W + E + R + PLGVV I +WNYPF+
Sbjct: 63 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 122
Query: 135 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETGEALV 193
PM+ AV +GN +++K SE + + + A L +NL V+ G ET E L
Sbjct: 123 PMVGAVAAGNAVILKPSEVSG-----HMADLLATLIPQYMDQNLYLVVKGGVPETTELLK 177
Query: 194 SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQ 253
D I++ GS VG+++M A+K LTPVTLELGGK V D D+ +
Sbjct: 178 ERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 237
Query: 254 SSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313
+SGQ C + I V ++ K +K G D G + H ++++ L
Sbjct: 238 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGL 296
Query: 314 VNDALDKGAEILARGSFGHLSEGAVDQ---YFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 370
+++ + +A G G DQ Y PT++V+V+ +MQEE FGP+MPI+
Sbjct: 297 IDN------QKVAHG-------GTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVC 343
Query: 371 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGG 430
+ EE ++ N L VFS ++ +++ A+ G ND + +LPFGG
Sbjct: 344 VRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGG 403
Query: 431 VKDSGFGRFAGVEGL-----RACCLVKSVVEDR----WWPYIKTKIPK 469
V +SG G + G + R CLVKS++ + +P K+P+
Sbjct: 404 VGNSGMGAYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPPSPAKMPR 451
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 207/451 (45%), Gaps = 22/451 (4%)
Query: 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL 72
+++ E V +AR A + R Q L L + I E ++ + + D K +A
Sbjct: 18 SKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYY 77
Query: 73 GEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 132
E++ E+I +++ + +W E + + PLGVV I +WNYPF+
Sbjct: 78 EEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLT 137
Query: 133 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAETGEA 191
PM+ A+ +GN +V+K SE + II L ++L VI G ET E
Sbjct: 138 IQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLD-----KDLYPVINGGVPETTEL 192
Query: 192 LVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAA 251
L D I++ GS GVG++IM A+K LTPVTLELGGK V + D+ +
Sbjct: 193 LKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252
Query: 252 LQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311
+SGQ C + I V ++ K +K G D G + H +++
Sbjct: 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVM 311
Query: 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 371
L+ + +A G G A +Y PT++ +V+ +MQEE FGP++PI+
Sbjct: 312 GLIE------GQKVAYGGTGD----AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCV 361
Query: 372 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGV 431
+ EE ++ N L +FS + +++ A+ G A ND + SLPFGGV
Sbjct: 362 RSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGV 421
Query: 432 KDSGFGRFAGVEGL-----RACCLVKSVVED 457
+SG G + G + R CLV+ ++ D
Sbjct: 422 GNSGMGSYHGKKSFETFSHRRSCLVRPLMND 452
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 223/453 (49%), Gaps = 28/453 (6%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S + D+ + A+KA + W +S +R F+ +L+ + + + S + G + A
Sbjct: 61 STRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMA 120
Query: 71 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 130
+ T I + +++ E G +++A + + +GVVG I WN+P +
Sbjct: 121 LNAQTATGSSHIRNFIKAYKEFSFQEALIEG----NEQAILHYDAIGVVGLITPWNWPMN 176
Query: 131 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII-QAALAAVGAPENLVDVITG-FAET 188
+ ++ A+ +G +V+K SE A S + I+ +AAL P + ++I G A
Sbjct: 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAAL-----PSGVFNLINGDGANV 231
Query: 189 GEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 246
G L + D I F GS G+ I +NAS TL V LELGGK A I+ D D+ + Q
Sbjct: 232 GSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADADIDAL-QR 290
Query: 247 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 306
VR +SGQ+C R V + IY + I + GP +G + E
Sbjct: 291 GVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQ 350
Query: 307 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPI 365
+K+Q+L+ +D+GA ++ G+ L G Y+ PTV +V M++ +EE FGP+
Sbjct: 351 YDKIQDLIQSGIDEGATLVTGGT--GLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPV 408
Query: 366 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQS 425
+ ++ FNT++E V LAND+ YGL + S + + R IAAQ++ G+ +N
Sbjct: 409 LSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-------HE 461
Query: 426 LP----FGGVKDSGFGRFAGVEGLRACCLVKSV 454
LP FGGVK SG R G+ G++ K++
Sbjct: 462 LPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 212/451 (47%), Gaps = 21/451 (4%)
Query: 12 RAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
+ +VD+ V AR+A ++ W +R + L L I + L+ + + + GK
Sbjct: 57 KEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFS 116
Query: 69 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
+A L ++ + + + +K G + +++ P+GV G I+ WN+P
Sbjct: 117 NAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSE----PVGVCGQIIPWNFP 172
Query: 129 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 188
+ A+ GN +V+K +E + +I+ A G P +V+++ G+ T
Sbjct: 173 LLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEA----GFPPGVVNIVPGYGPT 228
Query: 189 GEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVA 244
A +SS VDK+ F GS VG++I A K+ L V+LELGGK IV D D+ +
Sbjct: 229 AGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAV 288
Query: 245 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 304
+ A + GQ C A R +V IY FV + + K G PL G
Sbjct: 289 EFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDK 348
Query: 305 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 364
E EK+ +L+ +GA++ G G + PTV +V M++ +EE FGP
Sbjct: 349 EQYEKILDLIESGKKEGAKLECGGG----PWGNKGYFIQPTVFSDVTDDMRIAKEEIFGP 404
Query: 365 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 424
+ IMKF + ++V+K AN++ YGL +F+ +A +++ +Q G +N ++ +
Sbjct: 405 VQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYS--VVSA 462
Query: 425 SLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
PFGG K SG GR G G VK+V
Sbjct: 463 QCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 493
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 216/447 (48%), Gaps = 27/447 (6%)
Query: 11 SRAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
+ +VD+ V AR A ++ W + R + L L I + + + + D GK
Sbjct: 55 DKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPY 114
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNY 127
V + L ++ + + + +K+ G + + P+GV G I+ WN+
Sbjct: 115 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTR----HEPVGVCGQIIPWNF 170
Query: 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 187
P + A+ +GN +V+KV+E + + +I+ A G P +V+++ GF
Sbjct: 171 PLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----GFPPGVVNIVPGFGP 226
Query: 188 TGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHV 243
T A ++S VDK+ F GS +GR+I A S L VTLELGGK I+ D D+
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 AQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 302
+ A A + GQ +CAG+ R +V DIY FV + KS G P K + G
Sbjct: 287 VEQAHFALFFNQGQCSCAGS-RTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 303 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEE 360
+K+ +N +GA++L G A D+ + PTV +V M + +EE
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVFGDVQDGMTIAKEE 399
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +Q G +N +
Sbjct: 400 IFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCY-DV 458
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRA 447
+ QS PFGG K SG GR G GL+A
Sbjct: 459 FGAQS-PFGGYKMSGSGRELGEYGLQA 484
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 218/443 (49%), Gaps = 29/443 (6%)
Query: 4 LGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63
+G P+LS A + E + + KA WA + K+R LR II + + I I + +
Sbjct: 61 IGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQ 120
Query: 64 GKTMVDASLGEIMTTCEKITWLLSEGEKWLK---PEYRSSGRSMIHKKAKVEFHPLGVVG 120
GK + +A GE++ I W E ++ P ++ R + + P+GV
Sbjct: 121 GKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIR------QPVGVTA 173
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AI WN+P I A+ +G ++++ ++ + + + A G P ++
Sbjct: 174 AITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKA----GIPAGVLQ 229
Query: 181 VITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237
++TG A E G L S +V K+ F GS VGR++M + T+ ++LELGG FIV DD
Sbjct: 230 IVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDD 289
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD 297
D+ A+ + +++GQ C A R YV R +Y F ++A VK + G
Sbjct: 290 ADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVV 349
Query: 298 MGALCLLEHSEKLQNLVNDALDKGAEILARG-SFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
+G + + K++ + DA+ KGA+++ G G L +F P ++ V M +
Sbjct: 350 IGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGL-------FFEPGILTGVTSDMLV 402
Query: 357 MQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 416
+EE FGP+ P+ F+T+EEV+ AND+ +GL ++ + RA ++ ++ G+ N
Sbjct: 403 AKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNT 462
Query: 417 -FASNYMCQSLPFGGVKDSGFGR 438
SN + PFGGVK SG GR
Sbjct: 463 GLISNEVA---PFGGVKQSGLGR 482
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 210/451 (46%), Gaps = 21/451 (4%)
Query: 12 RAEVDERVAQARKA---QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
+ ++D+ V AR A VW + +R + L L + + + + S + GK +
Sbjct: 55 KVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFL 114
Query: 69 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
A ++ + + + +K G + P+GV G I+ WN+P
Sbjct: 115 QAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTR----HEPIGVCGQIIPWNFP 170
Query: 129 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 188
+ A+ GN +VIK +E S + +I+ A G P +V+++ G+ T
Sbjct: 171 LLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEA----GFPPGVVNILPGYGPT 226
Query: 189 GEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVA 244
A ++S +DKI F GS VG++I A ++ L VTLELGGK I+ D D+ +
Sbjct: 227 AGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAV 286
Query: 245 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 304
+ A + + GQ C R +V IY FV + + K G P + G
Sbjct: 287 EQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDK 346
Query: 305 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 364
+ K+ L+ + +GA++ G G + PTV NV M++ +EE FGP
Sbjct: 347 KQYNKILELIQSGVAEGAKLECGGK----GLGRKGFFIEPTVFSNVTDDMRIAKEEIFGP 402
Query: 365 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 424
+ I++F T +EV++ AN+S +GL AVF+ ++A +++ +Q G IN + N +
Sbjct: 403 VQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCY--NALNA 460
Query: 425 SLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
PFGG K SG GR G GLR VK+V
Sbjct: 461 QSPFGGFKMSGNGREMGEFGLREYSEVKTVT 491
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 205/459 (44%), Gaps = 34/459 (7%)
Query: 17 ERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIM 76
++ +AR+AQ W + + R L+ + I+ +E + E DTG+ +
Sbjct: 32 QQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSI-------- 83
Query: 77 TTCEKITWLLSEGEKW--LKPEY---RSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 131
T +I L+ ++W L PE + S+ + P +VG I WN+P
Sbjct: 84 -TVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTL 142
Query: 132 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV---ITGFAET 188
+ A+ +G +V+K SE A R + L A+ L DV + G ET
Sbjct: 143 SXIDTIPALLAGCAVVVKPSEIAP-------RFVAPLLXALNTVPELRDVLIFVEGGGET 195
Query: 189 GEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 248
G L++ VD + F GS GR + A++ P LELGGKD IV + ++ +
Sbjct: 196 GANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELATSAIL 255
Query: 249 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 308
A+ ++GQ+C ER YV + F Q+ + PL +G + + +
Sbjct: 256 WGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAG 315
Query: 309 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 368
+ + + DA++KGA I G L G + PTV NVNH+ K+ EE FGPI P+
Sbjct: 316 IINDHILDAVEKGAVIHCGGKVEELGGG---WWCRPTVXTNVNHSXKVXTEETFGPIXPV 372
Query: 369 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPF 428
F EE V LAND+ YGL AVF+GS+ A ++A Q+ G +IND A
Sbjct: 373 XPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAXXHEGEK 432
Query: 429 GGVKDSGF-GRFAGVEGLR------ACCLVKSVVEDRWW 460
SG G G GL+ A + + D WW
Sbjct: 433 NAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWW 471
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/433 (30%), Positives = 217/433 (50%), Gaps = 28/433 (6%)
Query: 22 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 81
A +AQ W +R +LR + I E I + + GK A + E+ T +
Sbjct: 53 AERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADY 111
Query: 82 ITWLLSEGEKWLKPEYRSSGRS----MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 137
I ++ +E + + E S R ++ K+A LGV I+ WN+PF I M
Sbjct: 112 IDYM-AEWARRYEGEIIQSDRPGENILLFKRA------LGVTTGILPWNFPFFLIARKMA 164
Query: 138 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS- 195
A+ +GN IVIK SE + + +I+ +G P + +++ G ET G+ L +
Sbjct: 165 PALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPRGVFNLVLGRGETVGQELAGNP 220
Query: 196 -VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 254
V + GS G IM A+K +T V LELGGK IV DD D+ + V + + +
Sbjct: 221 KVAMVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVIN 280
Query: 255 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQN 312
SGQ C AER YV + IY FV+++ + +++V G P A + D MG L E+++
Sbjct: 281 SGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQ 339
Query: 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 372
V A+++GA + +FG + Y+PPT++++V M +M EE FGP++P++ F+
Sbjct: 340 KVARAVEEGARV----AFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFD 395
Query: 373 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVK 432
T E+ + +ANDS YGL ++++ + + A + ++ G IN N+ G +
Sbjct: 396 TLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINR--ENFEAMQGFHAGWR 453
Query: 433 DSGFGRFAGVEGL 445
SG G G GL
Sbjct: 454 KSGIGGADGKHGL 466
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 134/433 (30%), Positives = 217/433 (50%), Gaps = 28/433 (6%)
Query: 22 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 81
A +AQ W +R +LR + I E I + + GK A + E+ T +
Sbjct: 53 AERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADY 111
Query: 82 ITWLLSEGEKWLKPEYRSSGRS----MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 137
I ++ +E + + E S R ++ K+A LGV I+ WN+PF I M
Sbjct: 112 IDYM-AEWARRYEGEIIQSDRPGENILLFKRA------LGVTTGILPWNFPFFLIARKMA 164
Query: 138 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS- 195
A+ +GN IVIK SE + + +I+ +G P + +++ G ET G+ L +
Sbjct: 165 PALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPRGVFNLVLGRGETVGQELAGNP 220
Query: 196 -VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 254
V + GS G IM A+K +T V LELGGK IV DD D+ + V + + +
Sbjct: 221 KVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVIN 280
Query: 255 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQN 312
SGQ C AER YV + IY FV+++ + +++V G P A + D MG L E+++
Sbjct: 281 SGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQ 339
Query: 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 372
V A+++GA + +FG + Y+PPT++++V M +M EE FGP++P++ F+
Sbjct: 340 KVARAVEEGARV----AFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFD 395
Query: 373 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVK 432
T E+ + +ANDS YGL ++++ + + A + ++ G IN N+ G +
Sbjct: 396 TLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINR--ENFEAMQGFHAGWR 453
Query: 433 DSGFGRFAGVEGL 445
SG G G GL
Sbjct: 454 KSGIGGADGKHGL 466
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 212/460 (46%), Gaps = 19/460 (4%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
+ L P + E++ ++ A K W +S QR Q LR + + + H E + +R
Sbjct: 18 QTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEEXAQCITR 77
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI-HKKAKVEFHPLGVVG 120
+ GK + A E+ + W G L PE +++ +++A +E+ PLGV+
Sbjct: 78 EXGKPIKQAR-AEVTKSAALCDWYAEHGPAXLNPE-----PTLVENQQAVIEYRPLGVIL 131
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
AI WN+P + + + +GN ++K + N + GC + I LA G P +
Sbjct: 132 AIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVT--GCA--QXIARILAEAGTPAGVYG 187
Query: 181 VITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
+ E ++ + + GS G I A L LELGG D FIV +D
Sbjct: 188 WVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDA 247
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
D+ + AV Q++GQ CA A+RF V I F + ++ G PL + D+
Sbjct: 248 DLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDL 307
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 358
G + ++L V ++ +GA +L G EG Y+ TV+ +V +
Sbjct: 308 GPXARFDLRDELHQQVQASVAEGARLLLGGE-KIAGEG---NYYAATVLADVTPDXTAFR 363
Query: 359 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA 418
+E FGP+ I + LANDS +GL +F+ A E AA+++CG IN ++
Sbjct: 364 QELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFINGYS 423
Query: 419 SNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458
++ + FGGVK SGFGR GL C V++V ++R
Sbjct: 424 ASDA--RVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 214/463 (46%), Gaps = 22/463 (4%)
Query: 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 73
EVD A +A + W+++ K+R+++L + + I +H + + + D G+ +
Sbjct: 65 EVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-A 123
Query: 74 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 133
++ E + E ++ R ++ +V P G VG I WN P
Sbjct: 124 QVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRV---PAGPVGIITPWNAPLMLST 180
Query: 134 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEAL 192
+ A+ GN +V+K +E + ++ I++ A P + +++ GF E G AL
Sbjct: 181 WRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEA----DLPPGVFNLVQGFGEEAGAAL 236
Query: 193 VSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRA 250
V+ V + G G+++MRNA+ L ++ ELGGK +V D D+ V
Sbjct: 237 VAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQ 296
Query: 251 ALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKL 310
+G+ C + R V I+ FV +V + +++ G PL + ++G L EH +++
Sbjct: 297 IFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRV 356
Query: 311 QNLVNDALDKGAEILARGSFGHLSEGAVD----QYFPPTVIVNVNHTMKLMQEEAFGPIM 366
V +GA +L G S D Y PTV V NH MK+ QEE FGP++
Sbjct: 357 LGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGENH-MKIAQEEIFGPVL 415
Query: 367 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 426
+ F +EE ++ AND++YGL VF+ RA +A +++ G+ +N + N
Sbjct: 416 VAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLN--SHNVRHLPT 473
Query: 427 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPK 469
PFGGVK SG R G L +K++ P +PK
Sbjct: 474 PFGGVKGSGDRREGGTYALDFYTDLKTIA----LPLRPPHVPK 512
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 200/424 (47%), Gaps = 21/424 (4%)
Query: 22 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 81
A+KAQK WAKS+ + R+ L+ Y+ E+++ I + +R+TG T++ +++ E+
Sbjct: 53 AQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-----ELEQ 107
Query: 82 ITWLLSEGEKWLKP--EYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAA 139
+L E + + + K K+ PLGV+ +I +N+P + + A
Sbjct: 108 TIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPA 167
Query: 140 VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV-ITGFAETGEALVSS-VD 197
+ GN +V K + SG II A G P +++V +T E G+ ++++ +
Sbjct: 168 IALGNSVVHKPDIQTAISGG---TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIP 224
Query: 198 KII-FVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 256
++I F GS VGR I A + + LELGG + F V D DV A+ G
Sbjct: 225 RLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQG 284
Query: 257 QNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316
Q C R VH+D+Y FV + VK + G K +G L EK ++
Sbjct: 285 QICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQ 344
Query: 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 376
A G E+ G V P V V ++ K+ Q E F PI I+K +D+E
Sbjct: 345 AKTDGIELAVEGK-------RVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQE 397
Query: 377 VVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF 436
+ +AND+ YGL AVF+ + + A QI G+ +ND + N ++ FGG K SG
Sbjct: 398 AIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVND-SPNIAFGGNKASGV 456
Query: 437 GRFA 440
GRF
Sbjct: 457 GRFG 460
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 218/433 (50%), Gaps = 28/433 (6%)
Query: 22 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEK 81
A +AQ W +R +LR + I E I + + GK A + E+ T +
Sbjct: 53 AERAQPEWEALPAIERASWLRKISAGIRERATEISALIVEEGGKIQQLAEV-EVAFTADY 111
Query: 82 ITWLLSEGEKWLKPEYRSSGRS----MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 137
I ++ +E + + E S R ++ K+A LGV I+ WN+PF I M
Sbjct: 112 IDYM-AEWARRYEGEIIQSDRPGENILLFKRA------LGVTTGILPWNFPFFLIARKMA 164
Query: 138 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS- 195
A+ +GN IVIK SE + + +I+ +G P + +++ G ET G+ L +
Sbjct: 165 PALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPRGVFNLVLGRGETVGQELAGNP 220
Query: 196 -VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQS 254
V + GS G IM A+K +T V LELGGK IV DD D+ + V + + +
Sbjct: 221 KVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVIN 280
Query: 255 SGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQN 312
SGQ C AER YV + IY FV+++ + +++V G P A + D MG L E+++
Sbjct: 281 SGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQ 339
Query: 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 372
V A+++GA + A G G EG Y+PPT++++V M +M EE FGP++P++ F+
Sbjct: 340 KVARAVEEGARV-ALG--GKAVEGK-GYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFD 395
Query: 373 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVK 432
T EE + +ANDS YGL ++++ + + A + ++ G IN N+ G +
Sbjct: 396 TLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINR--ENFEAMQGFHAGWR 453
Query: 433 DSGFGRFAGVEGL 445
SG G G GL
Sbjct: 454 KSGIGGADGKHGL 466
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 223/464 (48%), Gaps = 33/464 (7%)
Query: 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60
++ + PALSR E E + A K ++V +R L + K I E +E + +I +
Sbjct: 22 LEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILA 81
Query: 61 RDTGKTM------VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFH 114
D GK + V+ S+G T + + + E + P S R + ++
Sbjct: 82 IDAGKPIKQARVEVERSIG----TFKLAAFYVKEHRDEVIP---SDDRLIFTRR-----E 129
Query: 115 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174
P+G+VGAI +N+P + + + A+ +GN IV S A +II+ AL
Sbjct: 130 PVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNV 189
Query: 175 PENLVDVITGFAET-GEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 231
P + +++TG E G+ +V V+ I F GS VG +I + A + LELGG +
Sbjct: 190 PLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNP 247
Query: 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 291
IV D D+ ++ + +GQ C V I F+ K ++ G P
Sbjct: 248 NIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNP 307
Query: 292 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 351
L K D+G L +EH+E ++ +V A+D+G ++L G F PT I+ V+
Sbjct: 308 LDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK-------ALFYPT-ILEVD 359
Query: 352 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 411
L + E F P++PI++ N +EE++ +AN + YGL A+F+ +++ + A ++ G
Sbjct: 360 RDNILCKTETFAPVIPIIRTN-EEEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGG 418
Query: 412 AAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
IND +S + ++PFGGVK SG GR + +K+++
Sbjct: 419 VVIND-SSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 209/451 (46%), Gaps = 21/451 (4%)
Query: 12 RAEVDERVAQARKAQKV---WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
+ +VD+ V AR+A ++ W +R Q + L I + L+ + S + GK
Sbjct: 57 KEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFA 116
Query: 69 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
A L ++ + + + +K G + + P+GV G I WN P
Sbjct: 117 SAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGEFFSYTR----HEPIGVCGLIFPWNAP 172
Query: 129 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 188
+ + A+ GN +++K +E + +I+ A G P +V+++ G+ T
Sbjct: 173 MILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEA----GFPPGVVNIVPGYGPT 228
Query: 189 GEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVA 244
A +SS VDK+ F GS VG+MI A+K+ L VTLELG K+ IV D D+
Sbjct: 229 AGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAV 288
Query: 245 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 304
+ A + + GQ+C A + +V IY FV + + K G PL + G
Sbjct: 289 EFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINK 348
Query: 305 EHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 364
K+ L+ +GA++ G G + PTV NV M++ +EE FGP
Sbjct: 349 AQHNKIMELIESGKKEGAKLECGGG----PWGNKGYFIQPTVFSNVTDDMRIAKEEIFGP 404
Query: 365 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 424
+ IMKF + +EV+K AN++ YGL VF+ +A +++ +Q G +N + + Q
Sbjct: 405 VQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWVNCYLA-ASAQ 463
Query: 425 SLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
S P GG K SG GR G G+ VK+V
Sbjct: 464 S-PAGGFKMSGHGREMGEYGIHEYTEVKTVT 493
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 211/449 (46%), Gaps = 23/449 (5%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
++A+VD+ V A + +S K+R+ L ++K ++ I + + + G +
Sbjct: 43 NKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPL--- 99
Query: 71 SLGEIMTTCEKITWLLSEGEKWLKPEYRSS-GRSMIHKKAKVEFHPLGVVGAIVSWNYPF 129
SL E + + ++ + E+ G ++ K+A +GV G I WN+P
Sbjct: 100 SLSERVHYQXGLNHFVAARDALDNYEFEERRGDDLVVKEA------IGVSGLITPWNFPT 153
Query: 130 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-FAET 188
+ + AA +G+ +V+K SE ++ I+ VG P+ + +++ G A
Sbjct: 154 NQTSLKLAAAFAAGSPVVLKPSEETPFAAV----ILAEIFDKVGVPKGVFNLVNGDGAGV 209
Query: 189 GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 246
G L V F GS G I A+K V+LELGGK +IV DDVD+ A+
Sbjct: 210 GNPLSEHPKVRXXSFTGSGPTGSKIXEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKA 269
Query: 247 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 306
+ ++GQ C R V I F++++ + V G P +G + +
Sbjct: 270 TTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQ 329
Query: 307 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP-PTVIVNVNHTMKLMQEEAFGPI 365
+++QN +N +++GAE+ G EG YF PT+ +NV++ + QEE FGP+
Sbjct: 330 FDQVQNYINKGIEEGAELFYGGP--GKPEGLEKGYFARPTIFINVDNQXTIAQEEIFGPV 387
Query: 366 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQS 425
++ +N +E +++AND++YGL V + ++A I+ G IN+
Sbjct: 388 XSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRK---PD 444
Query: 426 LPFGGVKDSGFGRFAGVEGLRACCLVKSV 454
LPFGG K SG GR G G+ VKS+
Sbjct: 445 LPFGGYKQSGLGREWGDYGIEEFLEVKSI 473
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 215/424 (50%), Gaps = 35/424 (8%)
Query: 29 WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 88
W + S K+R LR +I++++ + I + ++GK + +A GEI+ + + L
Sbjct: 64 WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYS----AFFL-- 116
Query: 89 GEKWLKPEYRSSGRSMIHKKAK-----VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSG 143
+W E R +IH AK V P+GV I WN+P I + AA+ +G
Sbjct: 117 --EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAG 174
Query: 144 NGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVI----TGFAETGEALVSS--V 196
+V+K +E+ +S + A LA+ G P + +VI E GEA+ + V
Sbjct: 175 CTVVVKPAEDTPFSA-----LALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLV 229
Query: 197 DKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 256
KI F GS G++++ +A+ ++ V++ELGG FIV D +V A+ + +++G
Sbjct: 230 SKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTG 289
Query: 257 QNCAGAERFYVHRDIYALFVSQVAKIVK-SVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315
Q C + +F V R I+ FV A+ +K ++ G G L + EK++ VN
Sbjct: 290 QTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN 349
Query: 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE 375
DA+ KGA ++ G L + +F PT++ NV M EE FGP+ P++KF+T+E
Sbjct: 350 DAVSKGATVVTGGKRHQLGK----NFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405
Query: 376 EVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDS 434
E + +AN + GL +S + +A Q++ G+ +N+ S+ C PFGGVK S
Sbjct: 406 EAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVEC---PFGGVKQS 462
Query: 435 GFGR 438
G GR
Sbjct: 463 GLGR 466
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 205/440 (46%), Gaps = 25/440 (5%)
Query: 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 73
++DE + A K W R + L + + EH++ + + + + GK + ++
Sbjct: 27 QIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKXXTLEXGKLLSESK-- 84
Query: 74 EIMTTCEKI-TWLLSEGEKWLKPEYRSS--GRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 130
E + C I + G + LKP +S G + K++ GV+ A WN+P +
Sbjct: 85 EEVELCVSICNYYADHGPEXLKPTKLNSDLGNAYYLKQS------TGVIXACEPWNFPLY 138
Query: 131 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE-NLVDVITGFAETG 189
+ GN I++K + N S +II+ A GAPE +L+++ + +
Sbjct: 139 QVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRA----GAPEGSLINLYPSYDQLA 194
Query: 190 EALVSS-VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 248
+ + + + GS G + A K L T ELGG DAFIV DD D + +
Sbjct: 195 DIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIVLDDADPQVLRNVLN 254
Query: 249 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 308
A + GQ C ++R V + Y + ++ + ++ AG PL + + E
Sbjct: 255 DARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKE 314
Query: 309 KLQNLVNDALDKGAEILARGSFGHL-SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 367
KL+ V +A+D GA++ + + + S+GA +F PT++ ++ + +E FGPI
Sbjct: 315 KLEAQVKEAIDAGAKVFYQ--YPEIDSKGA---FFRPTILTDIAKDNPVFDKEVFGPIAE 369
Query: 368 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLP 427
+ D ++LANDS YGLG +V RA++++AQI+ G IN LP
Sbjct: 370 VFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTVIN--GRWITSGELP 427
Query: 428 FGGVKDSGFGRFAGVEGLRA 447
FGG+K SG+GR GL A
Sbjct: 428 FGGIKKSGYGRELSGLGLXA 447
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 220/462 (47%), Gaps = 25/462 (5%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
K +G PA +A+ + + A+ AQK WAK + + R+ LR I E++ ++ +
Sbjct: 39 KVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVA 98
Query: 62 DTGKTMVDASLGEIMTTCEKITW-----LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPL 116
+ GK + A + E+ T I + L EG+ + P + IHK P
Sbjct: 99 EQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGD--ILPSDNQDEKIYIHKV------PR 149
Query: 117 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 176
GVV I +WN+P + A+ +GN +V+K ++ + RI + A G P+
Sbjct: 150 GVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEA----GLPD 205
Query: 177 NLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFI 233
+++VI G G+ L S I GS G+ I + +++ +TPV LELGGK +
Sbjct: 206 GVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMV 265
Query: 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 293
V DD D+ A+ A+ + GQ C ER YVH +Y F+++ +VK + G P+
Sbjct: 266 VMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMD 325
Query: 294 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT 353
MG C + + ++V++A+ +GA + G + ++ PTV+V+V
Sbjct: 326 ADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQD 385
Query: 354 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 413
++ EE FGPI+PI+K ++ E+ ++ NDS YGL V + S + + ++ G
Sbjct: 386 NIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVY 445
Query: 414 INDFASNYMCQSLPF-GGVKDSGFGRFAGVEGLRACCLVKSV 454
IN Q F G K SGFG G GL K+V
Sbjct: 446 INRGMGE---QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 211/423 (49%), Gaps = 33/423 (7%)
Query: 29 WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 88
W + S K+R LR +I++++ + I + ++GK + +A GEI+ + + L
Sbjct: 64 WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYS----AFFL-- 116
Query: 89 GEKWLKPEYRSSGRSMIHKKAK-----VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSG 143
+W E R +IH AK V P+GV I WN+P I + AA+ +G
Sbjct: 117 --EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAG 174
Query: 144 NGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVI----TGFAETGEALVSS--VD 197
+V+K +E+ +S + A G P + +VI E GEA+ + V
Sbjct: 175 CTVVVKPAEDTPFSALALAELASQA----GIPSGVYNVIPCSRKNAKEVGEAICTDPLVS 230
Query: 198 KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ 257
KI F GS G++++ +A+ ++ V++ELGG FIV D +V A+ + +++GQ
Sbjct: 231 KISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQ 290
Query: 258 NCAGAERFYVHRDIYALFVSQVAKIVK-SVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316
+ +F V R I+ FV A+ +K ++ G G L + EK++ VND
Sbjct: 291 TAVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVND 350
Query: 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEE 376
A+ KGA ++ G L + +F PT++ NV M EE FGP+ P++KF+T+EE
Sbjct: 351 AVSKGATVVTGGKRHQLGK----NFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEE 406
Query: 377 VVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSG 435
+ +AN + GL +S + +A Q++ G+ +N+ S+ C PFGGVK SG
Sbjct: 407 AIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVEC---PFGGVKQSG 463
Query: 436 FGR 438
GR
Sbjct: 464 LGR 466
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 205/434 (47%), Gaps = 24/434 (5%)
Query: 29 WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 88
W +++ K R + L L I E+ ++ E+ SR+ GK + A EI + +
Sbjct: 76 WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGA 135
Query: 89 GE---KWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 145
EY SMI + PLGVV +I WNYP + A+ +GN
Sbjct: 136 ARCLNGLAAGEYLEGHTSMIRRD------PLGVVASIAPWNYPLMMAAWKLAPALAAGNC 189
Query: 146 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFV 202
+V+K SE + + A LA P +V+++ G +T G+ L V +
Sbjct: 190 VVLKPSEITPLTA-----LKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLT 244
Query: 203 GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 262
GS G I+ + + ++ +ELGGK IV DD D+ V + ++GQ+C A
Sbjct: 245 GSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAA 304
Query: 263 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 322
R Y + IY V ++ V ++ +G P ++G L L H E++ V +A G
Sbjct: 305 CRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGH 364
Query: 323 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 382
+ G G Y+ PT++ ++Q+E FGP++ + F+ +E+VV AN
Sbjct: 365 IKVITGGEKRKGNG---YYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWAN 421
Query: 383 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQS-LPFGGVKDSGFGRFAG 441
DS+YGL +V++ RA ++A++Q G +N +++M S +P GG K SG+G+
Sbjct: 422 DSQYGLASSVWTKDVGRAHRVSARLQYGCTWVN---THFMLVSEMPHGGQKLSGYGKDMS 478
Query: 442 VEGLRACCLVKSVV 455
+ GL +V+ V+
Sbjct: 479 LYGLEDYTVVRHVM 492
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 200/441 (45%), Gaps = 21/441 (4%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
K++ Y LS A++D + + A + R+Q L L + +I ++E + +
Sbjct: 20 KHMNY---LSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAE 76
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
D GK L EI +I + L+ ++W+ P S + + V P GV
Sbjct: 77 DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYI 136
Query: 122 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
I +NYP + P++ A+ GN +IK SE + +II A A PE + +
Sbjct: 137 IGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFA----PEYVAVI 192
Query: 182 ITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 241
G E L D I F GSP VG+++M+ A+K LTPV LELGGK IV D D+
Sbjct: 193 QGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLD 252
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
+ +SGQ C + YVH Y++ + + ++V+ V P ++ +
Sbjct: 253 QTVNQLMFGKFINSGQTCIAPDYLYVH---YSVKDALLERLVERVKTELP-----EINST 304
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
L ++Q LV+ ++L GS +S+ A+ TV+ V LM EE
Sbjct: 305 GKLVTERQVQRLVSLLEATQGQVLV-GSQADVSKRALSA----TVVDGVEWNDPLMSEEL 359
Query: 362 FGPIMPIMKFNTDEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGPI+P+++F++ + N L VF A+ I QIQ G A +N +
Sbjct: 360 FGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLH 419
Query: 421 YMCQSLPFGGVKDSGFGRFAG 441
LPFGG+ SG G + G
Sbjct: 420 AFSPYLPFGGIGASGMGEYHG 440
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 217/461 (47%), Gaps = 38/461 (8%)
Query: 13 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 64
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 65 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 181 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 236
++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 357 MQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++Q G I
Sbjct: 416 AKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFI 475
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
N + N + PFGG K SGFG+ G L +K+V
Sbjct: 476 NTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 206/447 (46%), Gaps = 28/447 (6%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
P+ +V V + A ++ + RR++L + + E++E I I + GK
Sbjct: 44 PSXPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCXEHGKPW 103
Query: 68 ------VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
VD + G + I+ L S PE +H + P+GV G
Sbjct: 104 KEAQGEVDYAAGFFDYCAKHISALDSH----TIPEKPKDCTWTVH------YRPVGVTGL 153
Query: 122 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
IV WN+P I + AA+ +G VIK + + +F + + P+ V++
Sbjct: 154 IVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXIAFFSVXDK----LDLPDGXVNL 209
Query: 182 ITGFAET-GEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238
+ G A G+ L D + F GS VGR ++ + ++ + + LELGG FIV DD
Sbjct: 210 VXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDA 269
Query: 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDM 298
D+ A + + GQ C A R +VH + F ++A+ V + G D+
Sbjct: 270 DLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKXTVGDGXNDGIDI 329
Query: 299 GALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQ 358
G L + +K++ + DALDKGA ++A L +G +FPPTV+ V+ Q
Sbjct: 330 GPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGL---FFPPTVVQGVDREXCCYQ 386
Query: 359 EEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA 418
EE FGP++P F T+EEV+ ND+ +GL VF+ RA+ +AA ++ G N
Sbjct: 387 EETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWN--T 444
Query: 419 SNYMCQSLPFGGVKDSGFGRFAGVEGL 445
PFGG K SG GR G+EGL
Sbjct: 445 GTGPTPEAPFGGXKASGIGREGGLEGL 471
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 217/461 (47%), Gaps = 38/461 (8%)
Query: 13 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 64
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 65 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 181 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 236
++ G G+ L D KI F GS VG+ IM++ A + V+L+LGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLIIFA 299
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 357 MQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++Q G I
Sbjct: 416 AKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFI 475
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
N + N + PFGG K SGFG+ G L +K+V
Sbjct: 476 NTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 216/461 (46%), Gaps = 38/461 (8%)
Query: 13 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 64
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 65 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 181 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 236
++ G G+ L D KI F GS VG+ IM++ A + V+L LGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFA 299
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 357 MQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++Q G I
Sbjct: 416 AKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFI 475
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
N + N + PFGG K SGFG+ G L +K+V
Sbjct: 476 NTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 199/441 (45%), Gaps = 21/441 (4%)
Query: 2 KYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSR 61
K++ Y LS A++D + + A + R+Q L L + +I ++E + +
Sbjct: 20 KHMNY---LSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAE 76
Query: 62 DTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGA 121
D GK L EI +I + L+ ++W+ P S + + V P GV
Sbjct: 77 DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYI 136
Query: 122 IVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDV 181
I +NYP + P++ A+ GN +IK SE + +II A A PE + +
Sbjct: 137 IGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFA----PEYVAVI 192
Query: 182 ITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 241
G E L D I F GSP VG+++M+ A+K LTPV LELGGK IV D D+
Sbjct: 193 QGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLD 252
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
+ +SGQ + YVH Y++ + + ++V+ V P ++ +
Sbjct: 253 QTVNQLMFGKFINSGQTXIAPDYLYVH---YSVKDALLERLVERVKTELP-----EINST 304
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 361
L ++Q LV+ ++L GS +S+ A+ TV+ V LM EE
Sbjct: 305 GKLVTERQVQRLVSLLEATQGQVLV-GSQADVSKRALSA----TVVDGVEWNDPLMSEEL 359
Query: 362 FGPIMPIMKFNTDEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGPI+P+++F++ + N L VF A+ I QIQ G A +N +
Sbjct: 360 FGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLH 419
Query: 421 YMCQSLPFGGVKDSGFGRFAG 441
LPFGG+ SG G + G
Sbjct: 420 AFSPYLPFGGIGASGMGEYHG 440
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 216/461 (46%), Gaps = 38/461 (8%)
Query: 13 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 64
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 65 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 181 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 236
++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 357 MQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++Q G I
Sbjct: 416 AKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFI 475
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
N + N + PFGG K SGFG+ G L +K+V
Sbjct: 476 NTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 216/461 (46%), Gaps = 38/461 (8%)
Query: 13 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 64
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 65 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 181 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 236
++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 357 MQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++Q G I
Sbjct: 416 AKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFI 475
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
N + N + PFGG K SGFG+ G L +K+V
Sbjct: 476 NTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 215/461 (46%), Gaps = 38/461 (8%)
Query: 13 AEVDERVAQARKA--QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTG------ 64
++VD+ VA A++A +W K + + R + L L + +HQE + I + D G
Sbjct: 74 SDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLA 133
Query: 65 -KTMVDASLGEIMTT---CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
KT V S+ C+KI +G + R + + KK P+GV G
Sbjct: 134 LKTHVGMSIQTFRYFAGWCDKI-----QGATIPINQARPNRNLTLTKK-----EPVGVCG 183
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180
++ WNYP + A + +GN +VIK ++ + + + A G P+ +V+
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----GIPKGVVN 239
Query: 181 VITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCD 236
++ G G+ L D KI F GS VG+ IM++ A + V+L LGGK I+
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFA 299
Query: 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKY 296
D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G PL
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359
Query: 297 DMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKL 356
+ G H KL + +GA ++ G+ + +F PTV +V M +
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTDVEDHMYI 415
Query: 357 MQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAI 414
+EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++Q G I
Sbjct: 416 AKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFI 475
Query: 415 NDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
N + N + PFGG K SGFG+ G L +K+V
Sbjct: 476 NTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 200/448 (44%), Gaps = 18/448 (4%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S A++D V A +A W++++ +R L + I + + + + + GK +
Sbjct: 60 SHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAV 119
Query: 71 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 130
E+ + + P ++G + + + P+G+VG+I WNYP
Sbjct: 120 KNDELPAIIDCWRFFAGAVRNLHAP---AAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLX 176
Query: 131 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-G 189
+ A+ GN +V K SE + R+I L PE +V+VITG ET G
Sbjct: 177 XXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADIL-----PEGVVNVITGRGETVG 231
Query: 190 EALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIA 247
AL++ V + G G+ ++ A+KT+ LELGGK IV D D+ V
Sbjct: 232 NALINHPKVGXVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGI 291
Query: 248 VRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 307
++GQ+C A R Y IY V+ + V ++ + ++G L
Sbjct: 292 RTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQR 351
Query: 308 EKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 366
+++ + V A D K EI G G EG +F PTV+ ++++ E FGP++
Sbjct: 352 DRVASFVERAADQKHIEITTGGRTGS-DEGF---FFQPTVVAGATQEDEIVRREVFGPVV 407
Query: 367 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 426
+ +F ++ V ANDS YGL +V++ +A A+++Q G IN +
Sbjct: 408 SVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAXRAASRLQYGCTWINTHFX--LTNEX 465
Query: 427 PFGGVKDSGFGRFAGVEGLRACCLVKSV 454
P GG+K SG+G+ V L V+ +
Sbjct: 466 PHGGIKQSGYGKDXSVYALEDYTAVRHI 493
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 193/429 (44%), Gaps = 16/429 (3%)
Query: 29 WAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSE 88
W + S +R + + I+ QE + I S + GK + A GEI + ++ +
Sbjct: 79 WPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQ 137
Query: 89 GEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 148
+ + G + V P+GVVG I WN+PF + A+ SG +V+
Sbjct: 138 ARALEGQTHNNIGDDRL---GLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVL 194
Query: 149 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSP 205
K SE S + R+ + A A G P+ + +V+TG+ + G+ L +VD + F GS
Sbjct: 195 KPSEFTSGTS---IRLAELAREA-GIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSV 250
Query: 206 GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 265
VG + A++T+ V LELGGK IV D D+ A ++GQ C R
Sbjct: 251 RVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRL 310
Query: 266 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEIL 325
V I ++ I + V+ G PL + +GA H+EK+ + V + GAE+L
Sbjct: 311 LVQEGIRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELL 370
Query: 326 ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 385
G G Y+ PTV V + +EE FGP++ + F T +E V LAN +
Sbjct: 371 LGGERIGREAGL---YYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATE 427
Query: 386 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 445
+GL +V+S + A + +I+ G IN LP GG K SG GR G G
Sbjct: 428 FGLSASVWSTNLETALQTIRRIRAGRCWINSVIDG--TPELPIGGYKKSGLGRELGRYGF 485
Query: 446 RACCLVKSV 454
K V
Sbjct: 486 DEYSQFKGV 494
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 206/459 (44%), Gaps = 36/459 (7%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S A+VD A+KAQ WA + +R + + + EH+E I E +++G T A
Sbjct: 48 SIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKA 107
Query: 71 SLGEIMTTCEKIT----WLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 126
+L +T IT + P + +++ AK GVVG I WN
Sbjct: 108 NLE--ITLAGNITKESASFPGRVHGRISPSNTPGKENRVYRVAK------GVVGVISPWN 159
Query: 127 YPFHNIFNPMLAAVFSGNGIVIK-VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
+P + + A+ GN +VIK S+ G RI + A G P ++ + G
Sbjct: 160 FPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEA----GVPAGVISTVAGA 215
Query: 186 -AETGEALVS-SVDKII-FVGSPGVGRMIMRNA--SKTLTPVTLELGGKDAFIVCDDVDV 240
+E G+ V+ +V K+I F GS VGR + A + V LELGG F+V D D+
Sbjct: 216 GSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADI 275
Query: 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 300
AQ A A GQ C R V ++ F+ + + VK++ G P A +G
Sbjct: 276 DAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGP 335
Query: 301 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEE 360
+ L+ + A +GA + G EG + P V +V M++ +EE
Sbjct: 336 VINDSQLSGLKEKIELAKKEGATVQVEGPI----EG---RLVHPHVFSDVTSDMEIAREE 388
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
FGP++ ++K + + +LAN S +GL AV+S RA + A QI G+ IND N
Sbjct: 389 IFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN 448
Query: 421 YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459
+ FGG K+SG GRF G ++ DRW
Sbjct: 449 DEPHVM-FGGSKNSGLGRFNG------DWAIEEFTTDRW 480
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 196/442 (44%), Gaps = 17/442 (3%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 70
S A+ +E V +AR+A K+WA +R + +R + + E +++ + S + GK +V+
Sbjct: 57 SVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEG 116
Query: 71 --SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP 128
+ E + C+ L + P RS G ++I +++P+G+VG I ++N+P
Sbjct: 117 VGEVQEYVDICDYAVGLSRMIGGPILPSERS-GHALIE-----QWNPVGLVGIITAFNFP 170
Query: 129 FHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 188
A+ GN + K + S +II L P + + G A+
Sbjct: 171 VAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADI 230
Query: 189 GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQI 246
G A+ V+ + F GS VG+ + + LELGG +A I +D D+ V
Sbjct: 231 GTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPS 290
Query: 247 AVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 306
A+ AA+ ++GQ C A R ++H I+ V+++ K + G P G L +
Sbjct: 291 ALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQA 350
Query: 307 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 366
V +A +G ++ +G Y PT++ + H + E F PI+
Sbjct: 351 VSMFLGAVEEAKKEGGTVV----YGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPIL 406
Query: 367 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA-REIAAQ-IQCGVAAINDFASNYMCQ 424
+ KF +EEV N+ + GL ++F+ R R + + CG+ +N S
Sbjct: 407 YVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIG 466
Query: 425 SLPFGGVKDSGFGRFAGVEGLR 446
FGG K +G GR +G + +
Sbjct: 467 G-AFGGEKHTGGGRESGSDAWK 487
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 193/435 (44%), Gaps = 17/435 (3%)
Query: 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA-- 70
AE +E V + R+A K+WA +R + +R + + + +++ + S + GK V+
Sbjct: 57 AEYEETVQKTREAWKMWADIPAPKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVG 116
Query: 71 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFH 130
+ E + C+ L + P R G ++I +++P+G+VG I ++N+P
Sbjct: 117 EVQEYVDVCDYAVGLSRMIGGPVLPSERP-GHALIE-----QWNPVGLVGIITAFNFPVA 170
Query: 131 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGE 190
A+ GN + K + + +I+ L P + + G A+ G
Sbjct: 171 VYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCGGADIGT 230
Query: 191 ALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 248
A+ VD + F GS VG+M+ + LELGG +A IV +D D+ V AV
Sbjct: 231 AMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAV 290
Query: 249 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 308
A++ ++GQ C R +H ++ V ++AK K V G P G L + +
Sbjct: 291 FASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDPWDPSTLYGPLHTKQAVD 350
Query: 309 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 368
+ + A +G ++ G Y PT+I + H ++ E F PI+ +
Sbjct: 351 QYLAAIEQAKQQGGTLVCGGKVMDRP----GNYVEPTIITGLAHDAPIVHTETFVPILYV 406
Query: 369 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA-REIAAQ-IQCGVAAINDFASNYMCQSL 426
+KF T+EE N+ + GL ++F+ R R + + CG+ +N S
Sbjct: 407 LKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGG- 465
Query: 427 PFGGVKDSGFGRFAG 441
FGG K +G GR +G
Sbjct: 466 AFGGEKHTGGGRESG 480
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 157/338 (46%), Gaps = 18/338 (5%)
Query: 113 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172
+ P GV I WN+ F + +A + +GN +V+K + A + +++ +
Sbjct: 170 YTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEES---- 225
Query: 173 GAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT------LTPVT 223
G P+ +V+ + G AE G+ LV I F GS VG I A+K L V
Sbjct: 226 GLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVI 285
Query: 224 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 283
E+GGKD +V +D D+ AQ +A +GQ C+ R VH +Y + +V +I
Sbjct: 286 AEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEIT 345
Query: 284 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 343
+S G P + MG + K+ + + ++G L G G S+G +
Sbjct: 346 ESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGR--LVSGGKGDDSKG---YFIE 400
Query: 344 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 403
PT+ +++ +LMQEE FGP++ K ++ +E +++AN++ YGL AV + ++
Sbjct: 401 PTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRA 460
Query: 404 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
+ G N + + PFGG K SG AG
Sbjct: 461 KQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 18/338 (5%)
Query: 113 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172
+ P+GV I WN+ + +A + +GN +V+K + + +++ A
Sbjct: 170 YTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDA---- 225
Query: 173 GAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG-RM-----IMRNASKTLTPVT 223
G P+ +++ + G AE G+ LV I F GS VG R+ ++R L V
Sbjct: 226 GLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVI 285
Query: 224 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 283
+E+GGKD +V D D+ A+ + +A SGQ C+ R +H+D+Y + + +
Sbjct: 286 VEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALA 345
Query: 284 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 343
K+++ G P MG + + EK+ + + +G L G G S G +
Sbjct: 346 KNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGR--LMTGGEGDSSTGF---FIQ 400
Query: 344 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 403
PT+I +++ +MQEE FGP++ K N + +++AN++ YGL AV + ++ +
Sbjct: 401 PTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQA 460
Query: 404 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
+ G N + + PFGG K SG AG
Sbjct: 461 KREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 190/456 (41%), Gaps = 29/456 (6%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSF--KQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
SR EV ER + W+ +R LR I + ++ E+ + GK
Sbjct: 52 SREEV-ERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPK- 109
Query: 69 DASLGEIMTTCEKITW----LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 124
A++GE+ +++ L G ++ ++ + + V PLGVV AI
Sbjct: 110 SAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD---TLETEGLVRREPLGVVAAITP 166
Query: 125 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 184
+NYP + N + + GN +V+K S + + AL G P + + ++
Sbjct: 167 FNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK----ALLDAGFPPDAIALLNL 222
Query: 185 FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242
+ E +V+ V + F GS VG +++ + +ELGG D IV +D D+
Sbjct: 223 PGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDL 280
Query: 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 302
A R +GQ C + R +Y V +VAK + S+ G P D+G L
Sbjct: 281 AADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLI 340
Query: 303 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI---VNVNHTMKLMQE 359
+++ + DA++KG +LA G L Y PT++ + M L +
Sbjct: 341 SPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYVQPTLVEAPADRVKDMVLYKR 394
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E F P+ ++ ++ ++LAN YGL AVF + R ++ G IND
Sbjct: 395 EVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDM-P 453
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ PFGG K SG R + A K++V
Sbjct: 454 RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 190/456 (41%), Gaps = 29/456 (6%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSF--KQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
SR EV ER + W+ +R LR I + ++ E+ + GK
Sbjct: 52 SREEV-ERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPK- 109
Query: 69 DASLGEIMTTCEKITW----LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 124
A++GE+ +++ L G ++ ++ + + V PLGVV AI
Sbjct: 110 SAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD---TLETEGLVRREPLGVVAAITP 166
Query: 125 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 184
+NYP + N + + GN +V+K S + + AL G P + + ++
Sbjct: 167 FNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK----ALLDAGFPPDAIALLNL 222
Query: 185 FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242
+ E +V+ V + F GS VG +++ + +ELGG D IV +D D+
Sbjct: 223 PGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDL 280
Query: 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 302
A R +GQ C + R +Y V +VAK + S+ G P D+G L
Sbjct: 281 AADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLI 340
Query: 303 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI---VNVNHTMKLMQE 359
+++ + DA++KG +LA G L Y PT++ + M L +
Sbjct: 341 SPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYVQPTLVEAPADRVKDMVLYKR 394
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E F P+ ++ ++ ++LAN YGL AVF + R ++ G IND
Sbjct: 395 EVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDM-P 453
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ PFGG K SG R + A K++V
Sbjct: 454 RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 189/456 (41%), Gaps = 29/456 (6%)
Query: 11 SRAEVDERVAQARKAQKVWAKSSF--KQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 68
SR EV ER + W+ +R LR I + ++ E+ + GK
Sbjct: 52 SREEV-ERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPK- 109
Query: 69 DASLGEIMTTCEKITW----LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVS 124
A++GE+ +++ L G ++ ++ + + V PLGVV AI
Sbjct: 110 SAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD---TLETEGLVRREPLGVVAAITP 166
Query: 125 WNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 184
+NYP + N + + GN +V+K S + + AL G P + + ++
Sbjct: 167 FNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK----ALLDAGFPPDAIALLNL 222
Query: 185 FAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242
+ E +V+ V + F GS VG +++ + +ELGG D IV +D D+
Sbjct: 223 PGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDL 280
Query: 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC 302
A R +GQ C + R +Y V +VAK + S+ G P D+G L
Sbjct: 281 AADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLI 340
Query: 303 LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI---VNVNHTMKLMQE 359
+++ + DA++KG +LA G L Y PT + + M L +
Sbjct: 341 SPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYVQPTFVEAPADRVKDMVLYKR 394
Query: 360 EAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 419
E F P+ ++ ++ ++LAN YGL AVF + R ++ G IND
Sbjct: 395 EVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDM-P 453
Query: 420 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455
+ PFGG K SG R + A K++V
Sbjct: 454 RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 193/437 (44%), Gaps = 24/437 (5%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
P ++ ++D A +A K W+K + +R + L + + +H+E + + + + GK
Sbjct: 38 PISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNT 97
Query: 68 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF----HPLGVVGAIV 123
+A LGE+ E + + + G S+ VE +P+GVVG I
Sbjct: 98 KEA-LGEVGRGIENVEFAAGAPSLMM-------GDSLASIATDVEAANYRYPIGVVGGIA 149
Query: 124 SWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT 183
+N+P A+ GN ++K SE + + A G P+ + +V+
Sbjct: 150 PFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKA----GLPKGVFNVVY 205
Query: 184 GFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVP 241
G + ++ + I FVGS VG + + S+ L V G K+ IV +D ++
Sbjct: 206 GAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLE 265
Query: 242 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL 301
V AA S+G+ C V I F++++ + V + G L +G +
Sbjct: 266 DTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPV 325
Query: 302 CLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEE 360
++ ++ + + L++GA ++ G ++S+ D YF PT+ NV M + ++E
Sbjct: 326 IREDNKKRTLSYIEKGLEEGARLVCDGR-ENVSD---DGYFVGPTIFDNVTTEMTIWKDE 381
Query: 361 AFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASN 420
F P++ +++ +E +++AN S + G +F+ + + R I G+ IN
Sbjct: 382 IFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPA 441
Query: 421 YMCQSLPFGGVKDSGFG 437
M PF G K S FG
Sbjct: 442 PMA-FFPFSGWKSSFFG 457
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 156/356 (43%), Gaps = 24/356 (6%)
Query: 113 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 173 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 222
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 223 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 282
+E GGKDA IV + D A+ V +A GQ C+ A R + + Y + +V K
Sbjct: 286 YVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 283 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 342
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 343 -PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 401
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 402 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 456
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 156/356 (43%), Gaps = 24/356 (6%)
Query: 113 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 173 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 222
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 223 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 282
+E GGK+A IV + D A+ V +A GQ C+ A R + + Y + +V K
Sbjct: 286 YVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 283 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 342
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 343 -PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 401
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 402 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 456
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 155/356 (43%), Gaps = 24/356 (6%)
Query: 113 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 173 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 222
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 223 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 282
+E GGKDA IV + D A+ V +A GQ + A R + + Y + +V K
Sbjct: 286 YVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKR 345
Query: 283 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 342
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 343 -PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 401
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 402 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 456
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 197/435 (45%), Gaps = 30/435 (6%)
Query: 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLG 73
+VD V AR+A WA+ +QR + L + + + + +TGK + +++
Sbjct: 43 QVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESAT- 101
Query: 74 EIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 133
E+ + K+ + + + + SG + A + P GVV +N+P H
Sbjct: 102 EVTSXVNKVAISV---QAFRERTGEKSG-PLADATAVLRHKPHGVVAVFGPYNFPGHLPN 157
Query: 134 NPMLAAVFSGNGIVIKVSENASWSGCFYFRI-IQAALAAVGAPENLVDVITGFAETGEAL 192
++ A+ +GN +V K SE + IQA L P +++++ G ETG AL
Sbjct: 158 GHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGL-----PAGVLNLVQGGRETGVAL 212
Query: 193 VS--SVDKIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVR 249
+ +D + F GS G ++ + + LE GG + +V + D+ ++
Sbjct: 213 AAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQ 272
Query: 250 AALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYD------MGALCL 303
+A S+GQ C A R V + + + +A++V +VSA + G++D GA+
Sbjct: 273 SAFISAGQRCTCARRLLVPQGAWGDAL--LARLV-AVSATLRV-GRFDEQPAPFXGAVIS 328
Query: 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFG 363
L +E L + KGA+ L + +GA P I++V+ + EE FG
Sbjct: 329 LSAAEHLLKAQEHLIGKGAQPLLAXT--QPIDGAA--LLTPG-ILDVSAVAERPDEEFFG 383
Query: 364 PIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 423
P++ +++++ ++ AN ++YGL + S S+ R + + + G+ N +
Sbjct: 384 PLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTG-AA 442
Query: 424 QSLPFGGVKDSGFGR 438
S PFGG+ SG R
Sbjct: 443 SSAPFGGIGASGNHR 457
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 192/444 (43%), Gaps = 15/444 (3%)
Query: 26 QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL 85
Q WA ++ ++R + ++ + ++ + E SR+ GKT+ DA G+I+ E ++
Sbjct: 77 QPKWAATNPQRRARVFXKFVQLLNDNXNELAEXLSREHGKTIDDAK-GDIVRGLEVCEFV 135
Query: 86 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 145
+ K E+ I + + P+G+ I +N+P A+ GN
Sbjct: 136 IGI-PHLQKSEFTEGAGPGIDXYSIRQ--PVGIGAGITPFNFPGXIPXWXFAPAIACGNA 192
Query: 146 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVD--KIIFVG 203
++K SE R+ + + A G P +++V+ G +A+++ D + FVG
Sbjct: 193 FILKPSERDP---SVPIRLAELXIEA-GLPAGILNVVNGDKGAVDAILTHPDIAAVSFVG 248
Query: 204 SPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC-AGA 262
S + R + A+ G K+ I+ D D+ A + A S+G+ C A +
Sbjct: 249 STPIARYVYGTAAXNGKRAQCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAIS 308
Query: 263 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 322
V + + ++ V+S+ GP K D G + E +++++L++ +++GA
Sbjct: 309 VAVPVGEETANRLIDKLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGA 368
Query: 323 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 382
+++ G L + + +V + + E FGP++ +++ EE + L
Sbjct: 369 KLVVDGRDFKLQGYENGHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPX 428
Query: 383 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFA-- 440
YG G A+++ AR+ A++I G +N FGG K S FG
Sbjct: 429 KHEYGNGVAIYTRDGDAARDFASRINIGXVGVN-VPIPVPLAYHSFGGWKSSSFGDLNQH 487
Query: 441 GVEGLRACCLVKSVVEDRWWPYIK 464
G + ++ K++ RW IK
Sbjct: 488 GTDSIKFWTRTKTITS-RWPSGIK 510
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 154/347 (44%), Gaps = 36/347 (10%)
Query: 113 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 172
+ P GV I WN+P AA+ +GN +V K S S G + + A
Sbjct: 664 YEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREA---- 719
Query: 173 GAPENLVDVITGFAET-GEALVSSVD--KIIFVGSPGVGRMIMRNASK------TLTPVT 223
G PE + + G G+ LV D I F GS G I+ A+K + +
Sbjct: 720 GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKII 779
Query: 224 LELGGKDAFIVCDDVD----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 279
E+GGK+A I+ DD D VPHV + +A GQ C+ R V +Y F+ ++
Sbjct: 780 SEMGGKNAIIIDDDADLDEAVPHV----LYSAFGFQGQKCSACSRVIVLDAVYDKFIERL 835
Query: 280 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH-LSEGAV 338
+ K+ GP MGA+ + ++ + AEI R GH L E V
Sbjct: 836 VSMAKATKVGPSEDPANYMGAVA--------DDKAMKSIKEYAEIGKRE--GHVLYESPV 885
Query: 339 ---DQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394
+ YF P T+I + ++ QEE FGP++ +M+ ++ ++ AN +++ L +FS
Sbjct: 886 PAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFS 945
Query: 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
S + + + G IN + + + PFGG + SG G AG
Sbjct: 946 RSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 171/393 (43%), Gaps = 33/393 (8%)
Query: 61 RDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 120
R+ GKT+ DA L E+ + + ++G K E G + + + GV
Sbjct: 598 REGGKTLDDA-LSELREAADFCRYYAAQGRKLFGSETAMPGPT--GESNALTMRGRGVFV 654
Query: 121 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV---GAPEN 177
AI WN+P + AA+ +GN +V K +E RI + A+A + G P++
Sbjct: 655 AISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTP-------RIAREAVALLHEAGIPKS 707
Query: 178 LVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKT--LTPVTLELGGKDAF 232
+ ++TG G AL + D ++F GS V R I R A+K + P+ E GG +A
Sbjct: 708 ALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAM 767
Query: 233 IVCDDVDVP-HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 291
I D +P VA V +A +S+GQ C+ +V D+ + VA + + G P
Sbjct: 768 I-ADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDP 826
Query: 292 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYFPPTVIVNV 350
+G + +E ++L DA + AR F G EG F I +
Sbjct: 827 SDVATHVGPVIDVEAKQRL-----DAHIARMKTEARLHFAGPAPEGC----FVAPHIFEL 877
Query: 351 NHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408
+L EE FGPI+ ++++ + E V++ + YGL V S I ++Q
Sbjct: 878 TEAGQLT-EEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQ 936
Query: 409 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 441
G +N + PFGG SG G AG
Sbjct: 937 VGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAG 969
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 146/345 (42%), Gaps = 45/345 (13%)
Query: 117 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
G V AI +N F I + A GN ++ K S+ A + +RI++ A G P
Sbjct: 202 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 255
Query: 176 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNAS------KTLTPVTLEL 226
N++ + T G+ + SS + I F GS + + R + +T + E
Sbjct: 256 PNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGEC 315
Query: 227 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 286
GGK+ V DV V +R+A + GQ C+ R YV + ++ ++ + +
Sbjct: 316 GGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375
Query: 287 SAGPP-------LAGKYDMGALC----LLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 335
G P + D A LEH+ +L ILA G
Sbjct: 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSL---------SILAGGQCNE--- 423
Query: 336 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLAND-SRYGLGCAV 392
+V Y P +I + + +M+EE FGP++ + + D+ E +KL + + YGL AV
Sbjct: 424 -SVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAV 482
Query: 393 FSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSG 435
F+ + +E ++ G IND ++ + PFGG + SG
Sbjct: 483 FAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASG 527
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 51/348 (14%)
Query: 117 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
G V AI +N F I + A GN ++ K S+ A + +RI++ A G P
Sbjct: 205 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 258
Query: 176 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVTLEL 226
N++ + G+ + SS + I F GS + + + ++ T + E
Sbjct: 259 PNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGEC 318
Query: 227 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 286
GGK+ V DV V +R+A + GQ C+ R YV ++ ++ + +
Sbjct: 319 GGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRI 378
Query: 287 SAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSFGH 332
G P D G LEH+ +L ILA G
Sbjct: 379 KVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK--- 423
Query: 333 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLG 389
+ +V + P ++ + + +M+EE FGP++ + + D +E ++L + + YGL
Sbjct: 424 -CDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLT 482
Query: 390 CAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSG 435
AVFS + +E ++ G IND ++ + PFGG + SG
Sbjct: 483 GAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 51/348 (14%)
Query: 117 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
G V AI +N F I + A GN ++ K S+ A + +RI++ A G P
Sbjct: 205 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 258
Query: 176 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVTLEL 226
N++ + G+ + SS + I F GS + + + ++ T + E
Sbjct: 259 PNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGEC 318
Query: 227 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 286
GGK+ V DV V +R+A + GQ C+ R YV ++ ++ + +
Sbjct: 319 GGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRI 378
Query: 287 SAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSFGH 332
G P D G LEH+ +L ILA G
Sbjct: 379 KVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK--- 423
Query: 333 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLG 389
+ +V + P ++ + + +M+EE FGP++ + + D +E ++L + + YGL
Sbjct: 424 -CDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLT 482
Query: 390 CAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSG 435
AVFS + +E ++ G IND ++ + PFGG + SG
Sbjct: 483 GAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 51/348 (14%)
Query: 117 GVVGAIVSWNYPFHNIFNPMLAA-VFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 175
G V AI +N F I + A GN ++ K S+ A + +RI++ A G P
Sbjct: 205 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREA----GLP 258
Query: 176 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASK------TLTPVTLEL 226
N++ + G+ + SS + I F GS + + + ++ T + E
Sbjct: 259 PNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGEC 318
Query: 227 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 286
GGK+ V DV V +R+A + GQ C+ R YV ++ ++ + +
Sbjct: 319 GGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRI 378
Query: 287 SAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSFGH 332
G P D G LEH+ +L ILA G
Sbjct: 379 KVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK--- 423
Query: 333 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLG 389
+ +V + P ++ + + +M+EE FGP++ + + D +E ++L + + YGL
Sbjct: 424 -CDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLT 482
Query: 390 CAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSG 435
AVFS + +E ++ G IND ++ + PFGG + SG
Sbjct: 483 GAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 32/258 (12%)
Query: 22 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL-GEIMTTCE 80
A +A + SS K+R FLR + I E I EI S++TG + +A L GE T
Sbjct: 72 AEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETG--LPEARLNGERGRTTG 129
Query: 81 KITWLLSEGEKW---------LKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYP--F 129
++ EK PE + + R I ++ P+G V + N+P F
Sbjct: 130 QLRLFADHIEKGDYLDRRVDAAXPERQPAPRQEI----RLVQRPVGPVAVFGASNFPLAF 185
Query: 130 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ET 188
AA+ +G +V+K +G + AA+ G + +I G + +
Sbjct: 186 STAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDV 245
Query: 189 GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL--ELGGKDAFIVCDDVDVPHVA 244
G ALV + + F GS GR + + P+ ELG + + +
Sbjct: 246 GHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPXFLLPE------- 298
Query: 245 QIAVRAALQSSGQNCAGA 262
A++A ++ GQ AG+
Sbjct: 299 --ALKARAETLGQGWAGS 314
>pdb|1O20|A Chain A, Crystal Structure Of Gamma-glutamyl Phosphate Reductase
(tm0293) From Thermotoga Maritima At 2.00 A Resolution
Length = 427
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 40/286 (13%)
Query: 16 DERVAQARKAQKVW---AKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKT------ 66
DE + +A+K ++ W ++ +++ + ++ + + + E ++ I E + D K
Sbjct: 14 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK 73
Query: 67 --------MVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGV 118
+ D + E + CE + L + + R G + A+V P+G
Sbjct: 74 ESLVDRLALNDKRIDEXIKACETVIGLKDPVGEVIDSWVREDGLRI----ARVRV-PIGP 128
Query: 119 VGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENL 178
+G I+ + P + +LA + SGN I+++ +A S I+ AL PE+
Sbjct: 129 IG-IIYESRPNVTVETTILA-LKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESS 186
Query: 179 VDVITGFAETGEALV-------SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 231
V+ I T +LV + +I G G+ + NA+ PV LE G +
Sbjct: 187 VEFIEN---TDRSLVLEXIRLREYLSLVIPRGGYGLISFVRDNAT---VPV-LETGVGNC 239
Query: 232 FIVCDD-VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 276
I D+ D+ + + A Q G C AE+ VH I F+
Sbjct: 240 HIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFL 284
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 115 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 174
PLGVV ++ P + L ++ +GN IV NA + RII A G
Sbjct: 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167
Query: 175 PENLVDVITGFAETG-EALVSSVDKIIFVGSPGVGRMIMRNASKTLTP-VTLELGGKDAF 232
P+ + +T G + L+ D + + + G +++ A + TP + + G AF
Sbjct: 168 PKGAISCMTVPTIQGTDQLMKHKDTAVILATG--GSAMVKAAYSSGTPAIGVGPGNGPAF 225
Query: 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 269
I ++P + + + +G CA + V R
Sbjct: 226 IE-RSANIPRAVKHILDSKTFDNGTICASEQSVVVER 261
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 145/386 (37%), Gaps = 31/386 (8%)
Query: 33 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 89
++ QR L ++K + + I++ ++G T D+++ G I T S G
Sbjct: 62 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 121
Query: 90 EKWLKPEYRSSGRSMIHKKAKVEFHPL----GVVGAIVSWNYPFHNIFNPMLAAVFSGNG 145
E + S S+ ++ H L GV I ++N+P ++ A+ SG
Sbjct: 122 E--VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 179
Query: 146 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSP 205
+++K + +W R++ + A P + +I G + + S D + F GS
Sbjct: 180 VIVKPATATAW---LTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSA 236
Query: 206 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV--DVPH---VAQIAVRAALQSSGQN 258
+ + + + + +E ++ I+C D D P + VR SGQ
Sbjct: 237 DTAATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 296
Query: 259 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318
C R +V + + + ++ G P MG+L E E + L A
Sbjct: 297 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV--LAGIAA 354
Query: 319 DKGAEILARGSFG----HLSEGAVDQYFPPTVIVNVNHTMKLMQE-EAFGPIMPIMKF-- 371
+ +LA S P +VN L+ + E FGP+ + +
Sbjct: 355 LREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRV 414
Query: 372 NTDEEVVKLAND---SRYGLGCAVFS 394
TD + A+ +R G G V S
Sbjct: 415 TTDTNALPEAHAVALARRGQGSLVAS 440
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 145/386 (37%), Gaps = 31/386 (8%)
Query: 33 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 89
++ QR L ++K + + I++ ++G T D+++ G I T S G
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 123
Query: 90 EKWLKPEYRSSGRSMIHKKAKVEFHPL----GVVGAIVSWNYPFHNIFNPMLAAVFSGNG 145
E + S S+ ++ H L GV I ++N+P ++ A+ SG
Sbjct: 124 E--VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 181
Query: 146 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSP 205
+++K + +W R++ + A P + +I G + + S D + F GS
Sbjct: 182 VIVKPATATAW---LTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSA 238
Query: 206 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV--DVPH---VAQIAVRAALQSSGQN 258
+ + + + + +E ++ I+C D D P + VR SGQ
Sbjct: 239 DTAATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298
Query: 259 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318
C R +V + + + ++ G P MG+L E E + L A
Sbjct: 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV--LAGIAA 356
Query: 319 DKGAEILARGSFG----HLSEGAVDQYFPPTVIVNVNHTMKLMQE-EAFGPIMPIMKF-- 371
+ +LA S P +VN L+ + E FGP+ + +
Sbjct: 357 LREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRV 416
Query: 372 NTDEEVVKLAND---SRYGLGCAVFS 394
TD + A+ +R G G V S
Sbjct: 417 TTDTNALPEAHAVALARRGQGSLVAS 442
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 145/386 (37%), Gaps = 31/386 (8%)
Query: 33 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 89
++ QR L ++K + + I++ ++G T D+++ G I T S G
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 123
Query: 90 EKWLKPEYRSSGRSMIHKKAKVEFHPL----GVVGAIVSWNYPFHNIFNPMLAAVFSGNG 145
E + S S+ ++ H L GV I ++N+P ++ A+ SG
Sbjct: 124 E--VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWAKAAPALLSGVP 181
Query: 146 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSP 205
+++K + +W R++ + A P + +I G + + S D + F GS
Sbjct: 182 VIVKPATATAW---LTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSA 238
Query: 206 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV--DVPH---VAQIAVRAALQSSGQN 258
+ + + + + +E ++ I+C D D P + VR SGQ
Sbjct: 239 DTAATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298
Query: 259 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318
C R +V + + + ++ G P MG+L E E + L A
Sbjct: 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV--LAGIAA 356
Query: 319 DKGAEILARGSFG----HLSEGAVDQYFPPTVIVNVNHTMKLMQE-EAFGPIMPIMKF-- 371
+ +LA S P +VN L+ + E FGP+ + +
Sbjct: 357 LREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRV 416
Query: 372 NTDEEVVKLAND---SRYGLGCAVFS 394
TD + A+ +R G G V S
Sbjct: 417 TTDTNALPEAHAVALARRGQGSLVAS 442
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 145/392 (36%), Gaps = 43/392 (10%)
Query: 33 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 89
++ QR L ++K + + I++ ++G T D+++ G I T S G
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 123
Query: 90 EKWLKPEYRSSGRSMIHKKAKVEFHPL----GVVGAIVSWNYPFHNIFNPMLAAVFSGNG 145
E + S S+ ++ H L GV I ++N+P ++ A+ SG
Sbjct: 124 E--VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 181
Query: 146 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSP 205
+++K + +W R++ + A P + +I G + + S D + F GS
Sbjct: 182 VIVKPATATAW---LTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSA 238
Query: 206 GVGRMIMRNASKTLTPVTLELGGK--------DAFIVCDDV--DVPH---VAQIAVRAAL 252
+ + P ++ G + ++ I+C D D P + VR
Sbjct: 239 DTAATLRAH------PAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMT 292
Query: 253 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 312
SGQ C R +V + + + ++ G P MG+L E E +
Sbjct: 293 VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV-- 350
Query: 313 LVNDALDKGAEILARGSFG----HLSEGAVDQYFPPTVIVNVNHTMKLMQE-EAFGPIMP 367
L A + +LA S P +VN L+ + E FGP+
Sbjct: 351 LAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVAS 410
Query: 368 IMKF--NTDEEVVKLAND---SRYGLGCAVFS 394
+ + TD + A+ +R G G V S
Sbjct: 411 VAPYRVTTDTNALPEAHAVALARRGQGSLVAS 442
>pdb|4GHK|A Chain A, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|B Chain B, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|C Chain C, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|D Chain D, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
Length = 444
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 86/220 (39%), Gaps = 9/220 (4%)
Query: 66 TMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSW 125
T+ D +L ++ ++ L + +YR SG + + PLGV+G I+
Sbjct: 93 TLSDKALKTMVEGLRQVATLPDPIGEMSNLKYRPSGIQVGQMRV-----PLGVIG-IIYE 146
Query: 126 NYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 185
+ P I L + SGN +++ A S ++I LA G P++ V V+
Sbjct: 147 SRPNVTIDAAALC-LKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETA 205
Query: 186 AETGEALVSSVDKIIFVGSPGVGR-MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVA 244
+ ++ + + V P G+ +I R ++ P+ L G V D V
Sbjct: 206 DRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVPMIKHLDGICHVYVDDRASVTKAL 265
Query: 245 QIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 284
+ A G C E V R I +S + ++ +
Sbjct: 266 TVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYR 304
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 110/268 (41%), Gaps = 13/268 (4%)
Query: 8 PALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 67
P + AE+D +A+ +KAQ+ +A S +Q + R + + + + + ++G +
Sbjct: 2 PVTNXAELDAXIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGXGI 61
Query: 68 VDASLGEIMTTCEKI-TWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWN 126
V+ + + E I E + E + G I + P+G++ IV
Sbjct: 62 VEDKVIKNHFASEFIYNKYKDEQTCGILEEDDNLGTXTIAE-------PVGIICGIVPTT 114
Query: 127 YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 186
P L ++ + NGI+ A S +++ A A GAP++++ I +
Sbjct: 115 NPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPS 174
Query: 187 -ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV-DVPHVA 244
E AL D + + + G G ++ A + P + +G + +V D+ D+
Sbjct: 175 VELSNALXKHDDIALILATGGPGX--VKAAYSSGKP-AIGVGAGNVPVVIDETADIKRAV 231
Query: 245 QIAVRAALQSSGQNCAGAERFYVHRDIY 272
+ + +G CA + V ++Y
Sbjct: 232 ASVLXSKTFDNGVVCASEQAVIVVDEVY 259
>pdb|1V9P|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase
pdb|1V9P|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase
Length = 584
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 138 AAVFSGNGIVIKVSENASWSGCFYF-RIIQAALA----AVGAPENLVDVITGFAETGEAL 192
A F +G+V+K+ + A W Y R + ALA A L+DV+ TG
Sbjct: 280 ALPFEADGVVVKLDDLALWRELGYTARAPRFALAYKFPAEEKETRLLDVVFQVGRTGRVT 339
Query: 193 VSSVDKIIFVGSPGVGRMIMRNAS 216
V + +F+ V R+ + N S
Sbjct: 340 PVGVLEPVFIEGSEVSRVTLHNES 363
>pdb|1PSZ|A Chain A, Pneumococcal Surface Antigen Psaa
pdb|3ZTT|A Chain A, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|B Chain B, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|C Chain C, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|D Chain D, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
Length = 303
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 27/156 (17%)
Query: 211 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE--RFYVH 268
++ NA KT KD F V D VDV ++ GQN G E +++
Sbjct: 97 LVENAKKT--------ENKDYFAVSDGVDVIYL-----------EGQNEKGKEDPHAWLN 137
Query: 269 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 328
+ +F +AK +SA P + L E+++KL L ++ DK +I A
Sbjct: 138 LENGIIFAKNIAK---QLSAKDP--NNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEK 192
Query: 329 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 364
SEGA +YF V + ++ EE P
Sbjct: 193 KLIVTSEGAF-KYFSKAYGVPSAYIWEINTEEEGTP 227
>pdb|3A8I|E Chain E, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
pdb|3A8I|F Chain F, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
pdb|3A8J|E Chain E, Crystal Structure Of Et-Ehred Complex
pdb|3A8J|F Chain F, Crystal Structure Of Et-Ehred Complex
pdb|3A8K|E Chain E, Crystal Structure Of Etd97n-Ehred Complex
pdb|3A8K|F Chain F, Crystal Structure Of Etd97n-Ehred Complex
pdb|3AB9|A Chain A, Crystal Structure Of Lipoylated E. Coli H-Protein (Reduced
Form)
Length = 129
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
VD+P V A S+G +CA AE DIYA ++ + ++S P L
Sbjct: 43 VDLPEVG------ATVSAGDDCAVAESVXAASDIYAPVSGEIVAVNDALSDSPEL 91
>pdb|3A7A|B Chain B, Crystal Structure Of E. Coli Lipoate-protein Ligase A In
Complex With Octyl-amp And Apoh-protein
pdb|3A7A|D Chain D, Crystal Structure Of E. Coli Lipoate-protein Ligase A In
Complex With Octyl-amp And Apoh-protein
pdb|3A7L|A Chain A, Crystal Structure Of E. Coli Apoh-Protein
Length = 128
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 292
VD+P V A S+G +CA AE DIYA ++ + ++S P L
Sbjct: 42 VDLPEVG------ATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPEL 90
>pdb|3K1J|A Chain A, Crystal Structure Of Lon Protease From Thermococcus
Onnurineus Na1
pdb|3K1J|B Chain B, Crystal Structure Of Lon Protease From Thermococcus
Onnurineus Na1
Length = 604
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 175 PENLVDVITGFAETGEALVSSVDK---IIFVGSPGVGRMIMRNASKTLTPV-TLE 225
PE L+D + G E + ++ ++ ++ +G PG G+ ++ A L P TLE
Sbjct: 36 PEKLIDQVIGQEHAVEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAELLPTETLE 90
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 144/386 (37%), Gaps = 31/386 (8%)
Query: 33 SFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASL---GEIMTTCEKITWLLSEG 89
++ QR L ++K + + I++ ++G T D+++ G I T S G
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 123
Query: 90 EKWLKPEYRSSGRSMIHKKAKVEFHPL----GVVGAIVSWNYPFHNIFNPMLAAVFSGNG 145
E + S S+ ++ H L GV I ++N+P ++ A+ SG
Sbjct: 124 E--VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 181
Query: 146 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSP 205
+++K + +W R++ + A P + +I G + + S D + F GS
Sbjct: 182 VIVKPATATAW---LTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSA 238
Query: 206 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV--DVPH---VAQIAVRAALQSSGQN 258
+ + + + + +E ++ I+C D D P + VR SGQ
Sbjct: 239 DTAATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298
Query: 259 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318
R +V + + + ++ G P MG+L E E + L A
Sbjct: 299 ATAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENV--LAGIAA 356
Query: 319 DKGAEILARGSFG----HLSEGAVDQYFPPTVIVNVNHTMKLMQE-EAFGPIMPIMKF-- 371
+ +LA S P +VN L+ + E FGP+ + +
Sbjct: 357 LREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRV 416
Query: 372 NTDEEVVKLAND---SRYGLGCAVFS 394
TD + A+ +R G G V S
Sbjct: 417 TTDTNALPEAHAVALARRGQGSLVAS 442
>pdb|3TTS|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|C Chain C, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|D Chain D, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|E Chain E, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|F Chain F, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTY|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|C Chain C, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|D Chain D, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|E Chain E, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|F Chain F, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
Length = 675
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 270 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD--KGAEILAR 327
+I AL +IV G L G Y G LC + H+E + L D KG +L R
Sbjct: 516 EIDALLPGHQNEIVLRQDWGG-LRGSYSCGILCDVIHAETAEVLAEYGADYYKGTPVLTR 574
Query: 328 GSFGH 332
FG+
Sbjct: 575 NKFGN 579
>pdb|1DGS|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase From T.
Filiformis
pdb|1DGS|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase From T.
Filiformis
Length = 667
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 138 AAVFSGNGIVIKVSENASWSGCFYF-RIIQAALA----AVGAPENLVDVITGFAETGEAL 192
A F +G+V+K+ + W Y R + ALA A L+DV+ TG
Sbjct: 277 ALPFEADGVVLKLDDLTLWGELGYTARAPRFALAYKFPAEEKETRLLDVVFQVGRTGRVT 336
Query: 193 VSSVDKIIFVGSPGVGRMIMRNAS 216
V + +F+ V R+ + N S
Sbjct: 337 PVGVLEPVFIEGSEVSRVTLHNES 360
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,191,809
Number of Sequences: 62578
Number of extensions: 623878
Number of successful extensions: 1914
Number of sequences better than 100.0: 103
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1478
Number of HSP's gapped (non-prelim): 108
length of query: 522
length of database: 14,973,337
effective HSP length: 103
effective length of query: 419
effective length of database: 8,527,803
effective search space: 3573149457
effective search space used: 3573149457
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)