Query 009919
Match_columns 522
No_of_seqs 274 out of 2428
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 15:54:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009919.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009919hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 4E-102 1E-106 823.2 52.1 448 1-458 32-483 (490)
2 3ros_A NAD-dependent aldehyde 100.0 7E-99 2E-103 798.5 50.8 443 1-459 14-459 (484)
3 3pqa_A Lactaldehyde dehydrogen 100.0 1.6E-98 5E-103 796.2 50.5 441 1-459 22-465 (486)
4 3iwj_A Putative aminoaldehyde 100.0 3.4E-98 1E-102 798.3 52.2 449 1-458 33-489 (503)
5 3sza_A Aldehyde dehydrogenase, 100.0 1.1E-98 4E-103 794.7 47.7 449 10-478 15-464 (469)
6 3ed6_A Betaine aldehyde dehydr 100.0 1E-97 3E-102 795.5 53.6 448 1-458 58-510 (520)
7 3rh9_A Succinate-semialdehyde 100.0 3.5E-98 1E-102 796.5 49.0 445 1-459 37-485 (506)
8 3k2w_A Betaine-aldehyde dehydr 100.0 5.9E-98 2E-102 795.3 50.3 448 1-458 38-488 (497)
9 3r31_A BADH, betaine aldehyde 100.0 3.6E-98 1E-102 798.4 47.1 444 1-458 40-488 (517)
10 4e4g_A Methylmalonate-semialde 100.0 1.1E-97 4E-102 795.4 50.6 448 1-457 52-504 (521)
11 3ifg_A Succinate-semialdehyde 100.0 1.2E-97 4E-102 789.9 49.8 442 1-456 38-482 (484)
12 3prl_A NADP-dependent glyceral 100.0 1.9E-97 7E-102 791.4 50.1 441 1-458 37-483 (505)
13 3ek1_A Aldehyde dehydrogenase; 100.0 1.6E-97 6E-102 791.0 49.5 441 1-457 58-501 (504)
14 4f3x_A Putative aldehyde dehyd 100.0 1.5E-97 5E-102 791.0 49.1 443 1-457 50-496 (498)
15 1o04_A Aldehyde dehydrogenase, 100.0 2.2E-97 8E-102 790.0 50.4 443 1-457 45-494 (500)
16 2o2p_A Formyltetrahydrofolate 100.0 3.5E-97 1E-101 790.8 52.1 445 1-456 62-515 (517)
17 3b4w_A Aldehyde dehydrogenase; 100.0 2.5E-97 8E-102 789.4 50.6 444 1-457 34-481 (495)
18 1a4s_A ALDH, betaine aldehyde 100.0 2.9E-97 1E-101 790.3 51.0 446 1-457 46-495 (503)
19 1bxs_A Aldehyde dehydrogenase; 100.0 4.5E-97 2E-101 787.9 52.3 443 1-457 46-495 (501)
20 2j6l_A Aldehyde dehydrogenase 100.0 3.4E-97 1E-101 790.0 51.2 447 1-456 47-497 (500)
21 3u4j_A NAD-dependent aldehyde 100.0 2.4E-97 8E-102 793.9 49.9 445 1-458 49-498 (528)
22 3qan_A 1-pyrroline-5-carboxyla 100.0 3.4E-97 1E-101 794.5 49.9 445 1-458 62-516 (538)
23 2imp_A Lactaldehyde dehydrogen 100.0 8.5E-97 3E-101 784.2 52.2 443 1-457 32-478 (479)
24 3i44_A Aldehyde dehydrogenase; 100.0 9.6E-97 3E-101 784.6 52.4 441 1-455 51-495 (497)
25 4h7n_A Aldehyde dehydrogenase; 100.0 1.6E-97 5E-102 788.8 46.2 456 1-473 16-472 (474)
26 2d4e_A 5-carboxymethyl-2-hydro 100.0 1.9E-96 6E-101 786.3 54.2 446 1-457 52-504 (515)
27 1wnd_A Putative betaine aldehy 100.0 1.2E-96 4E-101 783.4 51.8 441 1-456 48-493 (495)
28 3etf_A Putative succinate-semi 100.0 2.2E-96 7E-101 778.7 52.6 443 1-458 17-461 (462)
29 3jz4_A Succinate-semialdehyde 100.0 5.1E-96 2E-100 778.6 53.2 442 1-456 35-479 (481)
30 3r64_A NAD dependent benzaldeh 100.0 4E-96 1E-100 783.2 52.4 455 1-475 38-498 (508)
31 1uxt_A Glyceraldehyde-3-phosph 100.0 2.5E-96 8E-101 782.9 49.7 442 1-458 42-492 (501)
32 2ve5_A BADH, betaine aldehyde 100.0 6.6E-96 2E-100 780.0 52.1 448 1-458 32-483 (490)
33 2w8n_A Succinate-semialdehyde 100.0 2.7E-96 9E-101 780.6 48.4 442 1-457 36-485 (487)
34 3lns_A Benzaldehyde dehydrogen 100.0 2.7E-96 9E-101 776.0 46.7 439 1-457 16-456 (457)
35 1uzb_A 1-pyrroline-5-carboxyla 100.0 2.2E-95 7E-100 778.9 52.5 443 1-456 62-514 (516)
36 4dng_A Uncharacterized aldehyd 100.0 3.2E-95 1.1E-99 773.8 48.6 443 1-458 32-478 (485)
37 1euh_A NADP dependent non phos 100.0 4.5E-95 1.5E-99 770.2 49.3 437 1-457 28-473 (475)
38 1t90_A MMSDH, probable methylm 100.0 6.5E-95 2.2E-99 770.5 48.7 444 1-457 31-479 (486)
39 3ty7_A Putative aldehyde dehyd 100.0 4.3E-95 1.5E-99 771.5 45.5 439 1-455 33-474 (478)
40 4e3x_A Delta-1-pyrroline-5-car 100.0 1.4E-93 4.6E-98 768.0 48.8 457 1-476 88-562 (563)
41 3ju8_A Succinylglutamic semial 100.0 1.8E-91 6.1E-96 744.8 47.8 437 1-458 30-471 (490)
42 4f9i_A Proline dehydrogenase/d 100.0 4.8E-90 1.6E-94 778.6 51.0 445 1-458 556-1010(1026)
43 2y53_A Aldehyde dehydrogenase 100.0 3.5E-90 1.2E-94 742.2 43.5 449 1-458 32-519 (534)
44 3v4c_A Aldehyde dehydrogenase 100.0 1.8E-88 6.2E-93 728.0 41.1 438 1-455 50-515 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 8.1E-88 2.8E-92 720.0 44.1 436 1-455 17-480 (510)
46 3haz_A Proline dehydrogenase; 100.0 2.2E-87 7.5E-92 755.3 49.1 435 7-458 544-987 (1001)
47 3k9d_A LMO1179 protein, aldehy 100.0 2.7E-81 9.4E-86 662.7 31.5 422 5-457 4-448 (464)
48 2h5g_A Delta 1-pyrroline-5-car 100.0 2.9E-81 1E-85 660.1 30.4 402 1-458 17-435 (463)
49 1vlu_A Gamma-glutamyl phosphat 100.0 1.4E-80 4.7E-85 655.9 26.1 400 14-458 15-440 (468)
50 4ghk_A Gamma-glutamyl phosphat 100.0 2.6E-77 9E-82 628.4 34.5 393 12-458 25-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 1.3E-77 4.5E-82 627.7 31.0 390 13-458 14-422 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 2.3E-75 7.8E-80 615.5 31.7 382 7-417 1-400 (452)
53 4gic_A HDH, histidinol dehydro 97.1 0.31 1.1E-05 49.1 25.6 258 106-455 120-400 (423)
54 1kae_A HDH, histidinol dehydro 96.6 0.39 1.3E-05 48.5 22.2 257 106-455 114-393 (434)
55 2fiu_A Conserved hypothetical 74.4 7.4 0.00025 30.8 6.4 61 302-386 15-76 (99)
56 1b93_A Protein (methylglyoxal 62.4 10 0.00036 32.6 5.2 113 117-256 12-135 (152)
57 3lo3_A Uncharacterized conserv 58.8 23 0.00078 27.6 6.3 62 301-386 13-75 (94)
58 1vmd_A MGS, methylglyoxal synt 58.5 7.6 0.00026 34.3 3.7 118 112-256 22-151 (178)
59 2yvq_A Carbamoyl-phosphate syn 56.9 13 0.00043 31.6 4.8 58 169-226 63-132 (143)
60 2xw6_A MGS, methylglyoxal synt 53.3 5.1 0.00017 33.8 1.6 86 128-226 16-112 (134)
61 3hhl_A RPA0582; alpha-beta-bar 44.6 35 0.0012 28.9 5.6 64 301-385 45-109 (143)
62 3fgh_A Transcription factor A, 34.3 1E+02 0.0034 21.8 6.0 36 21-56 29-64 (67)
63 1use_A VAsp, vasodilator-stimu 33.2 46 0.0016 22.0 3.4 29 37-65 13-41 (45)
64 3v42_A Folliculin; tumor suppr 31.2 25 0.00086 32.3 2.6 66 132-207 20-86 (226)
65 2ec4_A FAS-associated factor 1 29.1 26 0.0009 30.8 2.4 49 359-407 25-77 (178)
66 2wk1_A NOVP; transferase, O-me 27.6 1.3E+02 0.0045 28.4 7.2 69 163-239 175-246 (282)
67 2eqz_A High mobility group pro 26.6 1.4E+02 0.0049 22.2 6.0 37 20-56 47-83 (86)
68 1gvf_A Tagatose-bisphosphate a 25.3 2.6E+02 0.009 26.4 8.8 107 120-229 21-138 (286)
69 2co9_A Thymus high mobility gr 24.2 2.2E+02 0.0076 22.0 6.9 42 22-63 49-90 (102)
70 1s7i_A Hypothetical protein PA 22.9 3E+02 0.01 22.2 8.0 28 359-387 81-108 (124)
71 1v63_A Nucleolar transcription 21.6 1.9E+02 0.0065 22.4 6.0 41 20-60 36-76 (101)
72 1hry_A Human SRY; DNA, DNA-bin 20.9 1.5E+02 0.0051 21.3 5.0 32 22-53 36-67 (76)
73 2v9v_A Selenocysteine-specific 20.3 99 0.0034 25.1 4.2 81 244-327 34-123 (135)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=3.7e-102 Score=823.19 Aligned_cols=448 Identities=29% Similarity=0.466 Sum_probs=417.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+|+++++++|++|++.|+++|..+|.++|++++++|++++++|++++++|+||+..+++..|+..+++
T Consensus 32 g~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~ 111 (490)
T 2wme_A 32 GEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGAD 111 (490)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999997667999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++...+++.... .+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 112 ~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~ 187 (490)
T 2wme_A 112 VLEYYAGLVPAIEGEQ-IPL---RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALK 187 (490)
T ss_dssp HHHHHHHHGGGCCEEE-EEE---ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHhccccccCcc-ccc---cCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHH
Confidence 9999998877653322 111 124567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHH-HHhcCCCceeeeCCCcceEEEcC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMR-NASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~-~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
+++++. ++|+|+|++|+|+|++ +.++.|++ .+|+|+||||+.+|+.|++ .+++++||+++|||||||+||++
T Consensus 188 l~~l~~----eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~ 263 (490)
T 2wme_A 188 LAEIYT----EAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFP 263 (490)
T ss_dssp HHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECT
T ss_pred HHHHHH----HhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEcc
Confidence 888766 6899999999999975 78999987 8999999999999988876 56778999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++
T Consensus 264 dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~ 343 (490)
T 2wme_A 264 DADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIES 343 (490)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||.+........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 344 a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d 423 (490)
T 2wme_A 344 GKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQD 423 (490)
T ss_dssp HHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSB
T ss_pred HHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCC
Confidence 99999999999987654444579999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 424 ~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 424 LARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHHCCeeEEEEeCCCCC--CCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 999999999999999999986543 356999999999999999999999999999998754
No 2
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=7e-99 Score=798.54 Aligned_cols=443 Identities=26% Similarity=0.431 Sum_probs=418.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|+..|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 14 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 92 (484)
T 3ros_A 14 NEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVS 92 (484)
T ss_dssp TEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+++|..+..... .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 93 ~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 168 (484)
T 3ros_A 93 ICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAAL 168 (484)
T ss_dssp HHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 99999999988877654322 24578899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++|+|+|+++ .++ |+. ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 169 l~~l~~----~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~d 243 (484)
T 3ros_A 169 TAKIIK----RAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDD 243 (484)
T ss_dssp HHHHHH----HHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTT
T ss_pred HHHHHH----HhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCC
Confidence 888765 67999999999999764 566 876 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+++
T Consensus 244 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a 323 (484)
T 3ros_A 244 ADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEA 323 (484)
T ss_dssp CCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 324 ~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 399 (484)
T 3ros_A 324 IDAGAKVFYQYPEI----DSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDI 399 (484)
T ss_dssp HHTTCEEEEECCCC----CCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCH
T ss_pred HHcCCeEEecCCcC----CCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 99999999999742 35799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEccc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
++++++++++++|+|+||++.. ..+.+||||+|.||+|++||++||++||+.|+|+.+..
T Consensus 400 ~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 400 DRAKKVSAQIETGMTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp HHHHHHHHHSCSSCCEETSCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred HHHHHHHHhCccceEEECCCCC--CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 9999999999999999999643 34579999999999999999999999999999988653
No 3
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.6e-98 Score=796.19 Aligned_cols=441 Identities=28% Similarity=0.449 Sum_probs=417.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 22 g~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~ 100 (486)
T 3pqa_A 22 LEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSIG 100 (486)
T ss_dssp CCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+++|.... .+.+ +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+
T Consensus 101 ~~~~~a~~~~~~~~~~-~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 175 (486)
T 3pqa_A 101 TFKLAAFYVKEHRDEV-IPSD----DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIE 175 (486)
T ss_dssp HHHHHHHHHHHCCEEE-ECCT----TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHH
T ss_pred HHHHHHHHHHHhcCce-ecCC----CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHH
Confidence 9999999988875432 2221 4567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++.+++.++|+|+|++++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++ +||+++|||||||+||++|
T Consensus 176 l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~d 253 (486)
T 3pqa_A 176 LAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLKD 253 (486)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcCC
Confidence 99999999999999999999999976 55899987 8999999999999999999888 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+++
T Consensus 254 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 333 (486)
T 3pqa_A 254 ADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKA 333 (486)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||. ..|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.
T Consensus 334 ~~~Ga~v~~gG~-------~~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~ 404 (486)
T 3pqa_A 334 IDEGGKLLLGGK-------RDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDI 404 (486)
T ss_dssp HHTTCEEEECCC-------EETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBH
T ss_pred HHCCCEEEecCC-------CCCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCH
Confidence 999999999996 25899999999 9999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEccc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
++++++++++++|+|+||++..+... .+||||+|+||+|++||++||++||+.|+|+.+..
T Consensus 405 ~~a~~~~~~l~aG~v~vN~~~~~~~~-~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 405 NKSLKFAENLEFGGVVINDSSLFRQD-NMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp HHHHHHHHHSCSSEEEESSCTTCCCT-TSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred HHHHHHHHhCCcceEEEeCCCCcCCC-CCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 99999999999999999998664433 79999999999999999999999999999988653
No 4
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=3.4e-98 Score=798.27 Aligned_cols=449 Identities=32% Similarity=0.505 Sum_probs=417.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH-----HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK-----VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEI 75 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~-----~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei 75 (522)
||++++++.++.+++++++++|++|+. .|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+
T Consensus 33 g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev 111 (503)
T 3iwj_A 33 QNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WDI 111 (503)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHH
Confidence 689999999999999999999999999 99999999999999999999999999999999999999999985 699
Q ss_pred HHHHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCch
Q 009919 76 MTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 155 (522)
Q Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~ 155 (522)
..+++.+++++..++++......+......+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 112 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp 191 (503)
T 3iwj_A 112 DDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELAS 191 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcch
Confidence 99999999999888776543322211111345678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceE
Q 009919 156 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232 (522)
Q Consensus 156 ~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~ 232 (522)
+++..+++++. ++|+|+|++++|+|++ +.+++|+. ++|+|+||||+.+|+.|++.+++++||+++|||||||+
T Consensus 192 ~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~ 267 (503)
T 3iwj_A 192 LTCLELGEICK----EVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPL 267 (503)
T ss_dssp HHHHHHHHHHH----HHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEE
T ss_pred HHHHHHHHHHH----HhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCce
Confidence 99998888765 6899999999999965 77889987 89999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHH
Q 009919 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 312 (522)
Q Consensus 233 iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~ 312 (522)
||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.+
T Consensus 268 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~ 347 (503)
T 3iwj_A 268 VVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILK 347 (503)
T ss_dssp EECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEE
Q 009919 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 313 ~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v 392 (522)
+|++++++|+++++||.... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 348 ~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 425 (503)
T 3iwj_A 348 FVSNAKSEGATILTGGSRPE--HLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAV 425 (503)
T ss_dssp HHHHHHHTTCEEEECCSCCT--TCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEE
T ss_pred HHHHHHHCCCEEEecCCCCc--cCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEE
Confidence 99999999999999997432 1147999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|++||.+||++||+.|+|+...
T Consensus 426 ~t~d~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~ 489 (503)
T 3iwj_A 426 ISNDLERCERVTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYI 489 (503)
T ss_dssp ECSCHHHHHHHHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred ECCCHHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeC
Confidence 999999999999999999999998643 3457999999999999999999999999999998753
No 5
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.1e-98 Score=794.73 Aligned_cols=449 Identities=28% Similarity=0.436 Sum_probs=412.0
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHHHcc
Q 009919 10 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 89 (522)
Q Consensus 10 ~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~ 89 (522)
.+.+++++++++|++|++.|+.++.++|.++|++++++|+++.++|++++++|+||+..++...|+..+++.++++++++
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999997789999999999999988
Q ss_pred ccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHH
Q 009919 90 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 169 (522)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l 169 (522)
.+|..+..........+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++++++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~-- 172 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ-- 172 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH--
Confidence 888765543332222345678999999999999999999999999999999999999999999999999999998774
Q ss_pred HhcCCCCCcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHH
Q 009919 170 AAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 248 (522)
Q Consensus 170 ~~ag~p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~ 248 (522)
+ +|+|++++|+|+.+.+..|+. .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.++
T Consensus 173 --a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~ 249 (469)
T 3sza_A 173 --Y-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIA 249 (469)
T ss_dssp --H-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHH
T ss_pred --h-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHH
Confidence 4 899999999998777778888 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeecc
Q 009919 249 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 328 (522)
Q Consensus 249 ~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG 328 (522)
+++|.|+||.|++++|||||++++|+|+++|+++++++ .|+|.++++++|||+++++++++.+++ +|+++++||
T Consensus 250 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG 323 (469)
T 3sza_A 250 WGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGG 323 (469)
T ss_dssp HHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECC
T ss_pred HHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCC
Confidence 99999999999999999999999999999999999998 599988999999999999999999998 599999999
Q ss_pred CCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc
Q 009919 329 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 408 (522)
Q Consensus 329 ~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~ 408 (522)
.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 324 ~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~ 398 (469)
T 3sza_A 324 TG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETS 398 (469)
T ss_dssp CE-----ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCC
T ss_pred cc-----CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCC
Confidence 73 3468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCCCCch
Q 009919 409 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN 478 (522)
Q Consensus 409 ~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~~~~ 478 (522)
+|+|+||++..+...+.+||||+|+||+|++||.+||++||+.|+|+.++++. ....+++|||+.+
T Consensus 399 ~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~----~~~~~~~yppy~~ 464 (469)
T 3sza_A 399 SGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMN----DEGLKVRYPPSPA 464 (469)
T ss_dssp CSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSC----CGGGGGGSSSCCC
T ss_pred cceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCccc----ccccccccCCCCc
Confidence 99999999876655678999999999999999999999999999999887641 1124578888643
No 6
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1e-97 Score=795.45 Aligned_cols=448 Identities=29% Similarity=0.487 Sum_probs=418.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~--~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.+++++++++|++|+ ..|++++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+
T Consensus 58 g~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~ 136 (520)
T 3ed6_A 58 QEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDI 136 (520)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 68999999999999999999999999 889999999999999999999999999999999999999999996 699999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++|++..++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++
T Consensus 137 ~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~ 213 (520)
T 3ed6_A 137 HNVFMYFAGLADKDGGE-MIDSP--IPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTT 213 (520)
T ss_dssp HHHHHHHHHHTTSCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcCe-ecccC--CCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHH
Confidence 99999999988876542 22211 1245678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
.++++++. ++|+|+|+||+|+|++ +.++.|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||+
T Consensus 214 ~~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~ 289 (520)
T 3ed6_A 214 IRVFELME----EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIF 289 (520)
T ss_dssp HHHHHHHH----HHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEEC
T ss_pred HHHHHHHH----HhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEEC
Confidence 98888765 6899999999999964 78899987 89999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 290 ~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~ 369 (520)
T 3ed6_A 290 DDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMD 369 (520)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 370 ~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 449 (520)
T 3ed6_A 370 VAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSK 449 (520)
T ss_dssp HHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECS
T ss_pred HHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECC
Confidence 99999999999998532111247999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 450 d~~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 450 DIGKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp CHHHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred CHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 9999999999999999999998665 356999999999999999999999999999998754
No 7
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=3.5e-98 Score=796.54 Aligned_cols=445 Identities=28% Similarity=0.461 Sum_probs=418.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 37 g~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 115 (506)
T 3rh9_A 37 GSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAG 115 (506)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999997 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEE-eeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF-HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~ 159 (522)
.++++++.++++.... .+.. .+...++++ +|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 116 ~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 191 (506)
T 3rh9_A 116 FFDYCAKHISALDSHT-IPEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMI 191 (506)
T ss_dssp HHHHHHHHGGGGCCEE-CSCC---GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHhcCcc-cccC---CCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHH
Confidence 9999999998886532 2221 345678888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
++++++. ++|+|+|+||+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++
T Consensus 192 ~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~ 267 (506)
T 3rh9_A 192 AFFSVMD----KLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFD 267 (506)
T ss_dssp HHHHHHT----TTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHH----HhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECC
Confidence 8888765 7899999999999965 77899987 799999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|++
T Consensus 268 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~ 347 (506)
T 3rh9_A 268 DADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQD 347 (506)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||...+ ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 348 a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d 424 (506)
T 3rh9_A 348 ALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTAD 424 (506)
T ss_dssp HHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSC
T ss_pred HHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 9999999999997421 1269999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEccc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 459 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~ 459 (522)
.++++++++++++|+|+||++.... +.+||||+|.||+|++||++||++||+.|+|+.+..
T Consensus 425 ~~~a~~~~~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 425 AERAQRVAAGLRFGHVGWNTGTGPT--PEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp HHHHHHHHHHCCCSEEEESCCCCCC--TTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred HHHHHHHHHhCCcceEEEcCCCCCC--CCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 9999999999999999999976543 469999999999999999999999999999987653
No 8
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=5.9e-98 Score=795.28 Aligned_cols=448 Identities=28% Similarity=0.453 Sum_probs=416.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 38 g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~ 116 (497)
T 3k2w_A 38 GKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTAT 116 (497)
T ss_dssp CSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++..... +.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 117 ~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 193 (497)
T 3k2w_A 117 FIDYGCDNALTIEGDIL-PSD--NQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTE 193 (497)
T ss_dssp HHHHHHHTTTTCCEEEE-ECS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHH
T ss_pred HHHHHHHHHHHhcCccc-ccC--CCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 99999999988765422 211 234567899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|+||+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 194 l~~ll~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~d 269 (497)
T 3k2w_A 194 LGRIAK----EAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDD 269 (497)
T ss_dssp HHHHHH----HTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTT
T ss_pred HHHHHH----HhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCC
Confidence 888765 7899999999999965 78899987 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+++
T Consensus 270 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a 349 (497)
T 3k2w_A 270 ADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEA 349 (497)
T ss_dssp CCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 350 ~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 429 (497)
T 3k2w_A 350 IKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSF 429 (497)
T ss_dssp HHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBH
T ss_pred HHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCH
Confidence 99999999999731111123689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
++++++++++++|+|+||++..+. +.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 430 ~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 430 ANINQAISDLEVGEVYINRGMGEQ--HQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp HHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHhCCeeEEEEcCCCCCC--CCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 999999999999999999987653 56999999999999999999999999999998654
No 9
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.6e-98 Score=798.42 Aligned_cols=444 Identities=29% Similarity=0.443 Sum_probs=414.4
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++ |+..+++
T Consensus 40 g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~ 116 (517)
T 3r31_A 40 GEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTS 116 (517)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999999887 9999999
Q ss_pred HHHHHHHcccc---ccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 81 KITWLLSEGEK---WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 81 ~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
.++++++.+++ |+..+..+.. .+. .+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 117 ~~~~~a~~~~~~~~~~~g~~~~~~---~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t 192 (517)
T 3r31_A 117 GADAFEFFGGIAPSALNGDYIPLG---GDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLG 192 (517)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEECS---SSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSH
T ss_pred HHHHHHHHhhhccccccCcccccC---CCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHH
Confidence 99999887765 3333332221 234 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
+.++++++. ++|+|+|++++|+|+.+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||+
T Consensus 193 ~~~l~~ll~----eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~ 268 (517)
T 3r31_A 193 ALKIAEILI----EAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF 268 (517)
T ss_dssp HHHHHHHHH----HTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEEC
T ss_pred HHHHHHHHH----HhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEe
Confidence 998888765 689999999999996688999998 79999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+
T Consensus 269 ~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 348 (517)
T 3r31_A 269 DDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIE 348 (517)
T ss_dssp TTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++|| .........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 349 ~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~ 427 (517)
T 3r31_A 349 KGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTA 427 (517)
T ss_dssp HHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECS
T ss_pred HHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeC
Confidence 9999999999999 421111347999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++||++||+.|+|+...
T Consensus 428 d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 488 (517)
T 3r31_A 428 DLARAHRVVDGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVST 488 (517)
T ss_dssp CHHHHHHHHHHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECC
T ss_pred CHHHHHHHHHHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcC
Confidence 999999999999999999999654 3457999999999999999999999999999998765
No 10
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-97 Score=795.42 Aligned_cols=448 Identities=22% Similarity=0.360 Sum_probs=415.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 52 g~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~ 130 (521)
T 4e4g_A 52 GEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLE 130 (521)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999995 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++..... +.....+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+
T Consensus 131 ~l~~~a~~~~~-~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~ 207 (521)
T 4e4g_A 131 VCEFVIGIPHL-QKSEFTEG--AGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIR 207 (521)
T ss_dssp HHHHHHTHHHH-TCEEEEEE--EETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHH
T ss_pred HHHHHHHHHHH-hcCccccc--CCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 99999875433 33222111 1123467899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+++++. ++|+|+|+|++|+|+.+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++||
T Consensus 208 l~~l~~----eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dA 283 (521)
T 4e4g_A 208 LAELMI----EAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDA 283 (521)
T ss_dssp HHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTS
T ss_pred HHHHHH----HhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCC
Confidence 888765 689999999999998788888987 79999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchh-hHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
|++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|.++++++||++++++++++.++|+++
T Consensus 284 Dl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a 363 (521)
T 4e4g_A 284 DLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSG 363 (521)
T ss_dssp CHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||.....+.+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 364 ~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~ 443 (521)
T 4e4g_A 364 IEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDG 443 (521)
T ss_dssp HHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBH
T ss_pred HHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCH
Confidence 99999999999753322335799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC--CcchHHHHHhchhceEEEEc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~~l~~ft~~k~v~~~ 457 (522)
++++++++++++|+|+||++.. ...+.+||||+|+||+| ++||++||++||+.|+|+.+
T Consensus 444 ~~a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~ 504 (521)
T 4e4g_A 444 DAARDFASRINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504 (521)
T ss_dssp HHHHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEEC
T ss_pred HHHHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEe
Confidence 9999999999999999999753 33456999999999999 79999999999999999864
No 11
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.2e-97 Score=789.89 Aligned_cols=442 Identities=30% Similarity=0.523 Sum_probs=413.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 38 g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 116 (484)
T 3ifg_A 38 GESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAAS 116 (484)
T ss_dssp CCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++...+++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 117 ~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 193 (484)
T 3ifg_A 117 FIEWFAEEGKRVAGD-TLPTP--DANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALA 193 (484)
T ss_dssp HHHHHHHHHTTCCEE-EECCS--STTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHhhcCc-ccccc--CCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 999998876654321 11111 124567899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 194 l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~d 269 (484)
T 3ifg_A 194 MAFLAE----RAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDD 269 (484)
T ss_dssp HHHHHH----HHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTT
T ss_pred HHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCC
Confidence 888765 6899999999999965 77899987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 270 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a 349 (484)
T 3ifg_A 270 ADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADA 349 (484)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 350 ~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 425 (484)
T 3ifg_A 350 LAKGASLMTGGKRH----ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDI 425 (484)
T ss_dssp HHTTCEEEECCSBC----TTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBH
T ss_pred HHCCCEEEECCCcc----CCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 99999999999742 23699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
++++++++++++|+|+||+... ..+.+||||+|+||+|++||++||++||+.|+|+.
T Consensus 426 ~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 426 GRVWRVAEALEYGMVGINTGLI--SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp HHHHHHHHHCCCSEEEESCSCC--CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEE
T ss_pred HHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEE
Confidence 9999999999999999998533 34579999999999999999999999999999875
No 12
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.9e-97 Score=791.41 Aligned_cols=441 Identities=31% Similarity=0.483 Sum_probs=412.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 37 g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~ 115 (505)
T 3prl_A 37 GVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTAD 115 (505)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccc---cccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMI---HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
.++++++.+.++.... .+...... +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 116 ~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t 194 (505)
T 3prl_A 116 IIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLS 194 (505)
T ss_dssp HHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHH
T ss_pred HHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 9999999888765422 21111000 3457889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV 234 (522)
+..+++++. ++|+|+|++++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++ +||+++|||||||+||
T Consensus 195 a~~l~~ll~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV 268 (505)
T 3prl_A 195 GIKMVEALA----DAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIV 268 (505)
T ss_dssp HHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEE
T ss_pred HHHHHHHHH----HhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCcc
Confidence 988887654 7899999999999964 77899987 8999999999999999999988 9999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|. +++++||++++++++++.++|
T Consensus 269 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i 347 (505)
T 3prl_A 269 LDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLI 347 (505)
T ss_dssp CTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 348 ~~a~~~Ga~v~~gG~-------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t 420 (505)
T 3prl_A 348 DDALENGATLLSGNK-------RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFT 420 (505)
T ss_dssp HHHHHTTCEEEECCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEEC
T ss_pred HHHHHCCCEEEecCC-------CCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEc
Confidence 999999999999997 3689999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
+|.++++++++++++|+|+||++... ..+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 421 ~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 421 KDTDRAINIGKHLEVGTVHINAKTER-GPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp SCHHHHHHHHHTSCSSEEEESSCCCS-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCHHHHHHHHHHCCeeEEEEcCCCCC-CCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 99999999999999999999998653 3457999999999999999999999999999998754
No 13
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.6e-97 Score=791.03 Aligned_cols=441 Identities=29% Similarity=0.499 Sum_probs=413.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 58 g~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 136 (504)
T 3ek1_A 58 GSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAAS 136 (504)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++....++.... .+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 137 ~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~ 213 (504)
T 3ek1_A 137 FIEWFAEEAKRVYGDT-IPAP--QNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALA 213 (504)
T ss_dssp HHHHHHHHHTTCCEEE-ECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhcCcc-cccc--cccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHH
Confidence 9999988776543221 1111 124567899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 214 l~~l~~----eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~d 289 (504)
T 3ek1_A 214 LGVLAE----KAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDD 289 (504)
T ss_dssp HHHHHH----HTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTT
T ss_pred HHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCC
Confidence 887765 7899999999999865 77899987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 290 ADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a 369 (504)
T 3ek1_A 290 ADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDA 369 (504)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 370 ~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 443 (504)
T 3ek1_A 370 VSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENF 443 (504)
T ss_dssp HHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBH
T ss_pred HHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCH
Confidence 9999999999973 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
++++++++++++|+|+||+... ..+.+||||+|+||+|+++|++||++||+.|+|+..
T Consensus 444 ~~a~~~a~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~ 501 (504)
T 3ek1_A 444 SRAIRVSEALEYGMVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501 (504)
T ss_dssp HHHHHHHHHSCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred HHHHHHHHhCCcCeEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence 9999999999999999998653 345799999999999999999999999999999864
No 14
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.5e-97 Score=791.00 Aligned_cols=443 Identities=25% Similarity=0.426 Sum_probs=416.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+|+++++++|++|++.|++++.++|.++|++++++|+++.++|++++++|+||+..++...|+..+++
T Consensus 50 g~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~ 129 (498)
T 4f3x_A 50 GAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIID 129 (498)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999995579999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|+++.++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 130 ~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~ 206 (498)
T 4f3x_A 130 CWRFFAGAVRNLHAP-AAGEY--LPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALK 206 (498)
T ss_dssp HHHHHHHHTTCCEEE-CBEEE--ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHhcCc-cccCC--cccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHH
Confidence 999999988875432 22111 134567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++ +|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 207 l~~l~~----ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~d 281 (498)
T 4f3x_A 207 LARLIA----DI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGD 281 (498)
T ss_dssp HHHHHH----TT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTT
T ss_pred HHHHHH----Hh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCC
Confidence 988876 56 9999999999965 68899987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 282 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a 361 (498)
T 4f3x_A 282 ADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERA 361 (498)
T ss_dssp SCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCC-cEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 318 LDKGA-EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 318 ~~~Ga-~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
+++|+ ++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 362 ~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d 437 (498)
T 4f3x_A 362 ADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKD 437 (498)
T ss_dssp HHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSB
T ss_pred HHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCC
Confidence 99999 999999742 2479999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++++|+|+||++..+. +.+||||+|+||+|+++|.+||++||+.|+|+..
T Consensus 438 ~~~a~~~a~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 438 ISKAMRAASRLQYGCTWINTHFMLT--NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp HHHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHHhCCcceEEEcCCCCCC--CCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999986654 5699999999999999999999999999999763
No 15
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=2.2e-97 Score=790.03 Aligned_cols=443 Identities=30% Similarity=0.462 Sum_probs=416.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH---HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMT 77 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~---~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~ 77 (522)
|+++++++.++.+++++++++|++||. .|+.++.++|.++|++++++|++++++|++++++|+||+..++...|+..
T Consensus 45 g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~ 124 (500)
T 1o04_A 45 GEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDM 124 (500)
T ss_dssp TEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 689999999999999999999999999 99999999999999999999999999999999999999999886679999
Q ss_pred HHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 78 TCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 78 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
+++.++|+++.+++|..+. .+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 125 ~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t 200 (500)
T 1o04_A 125 VLKCLRYYAGWADKYHGKT-IPI---DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 200 (500)
T ss_dssp HHHHHHHHHHHTTTCCEEE-ECC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHH
T ss_pred HHHHHHHHHHHHHHhhCcc-eec---CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHH
Confidence 9999999999998876542 221 123456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHh-cCCCceeeeCCCcceEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFI 233 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa-~~~~pv~lelgGk~p~i 233 (522)
+..+++++. ++|+|+|++|+|+|+ .+.+++|++ .+|+|+||||+.+|+.|++.++ +++||+++|||||||+|
T Consensus 201 ~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~i 276 (500)
T 1o04_A 201 ALYVANLIK----EAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 276 (500)
T ss_dssp HHHHHHHHH----HHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEE
T ss_pred HHHHHHHHH----HhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEE
Confidence 998888765 689999999999995 478899987 7999999999999999999999 99999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++
T Consensus 277 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~ 356 (500)
T 1o04_A 277 IMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGY 356 (500)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 357 i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 432 (500)
T 1o04_A 357 INTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432 (500)
T ss_dssp HHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEE
Confidence 999999999999999732 1368999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|+|.++++++++++++|+|+||++... .+.+||||+|.||+|++||.+||++||+.|+|+.+
T Consensus 433 t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 433 TKDLDKANYLSQALQAGTVWVNCYDVF--GAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp CSBHHHHHHHHHHCCSSEEEESCSSCC--CTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred CCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 999999999999999999999987543 35699999999999999999999999999999764
No 16
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=3.5e-97 Score=790.75 Aligned_cols=445 Identities=27% Similarity=0.455 Sum_probs=415.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH--HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.+++++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++++|+||+..++...|+..+
T Consensus 62 g~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~ 141 (517)
T 2o2p_A 62 GSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMS 141 (517)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 689999999999999999999999999 999999999999999999999999999999999999999999865799999
Q ss_pred HHHHHHHHHccccccCcccccCCcc-cccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
++.++|++..++++.... .+.... ......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 142 ~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~t 220 (517)
T 2o2p_A 142 IQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLT 220 (517)
T ss_dssp HHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHH
Confidence 999999999888765432 222100 112356899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh-cCCCceeeeCCCcceEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFI 233 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa-~~~~pv~lelgGk~p~i 233 (522)
+..+++++. ++|+|+|++|+|+|.+ +.+++|++ .+|+|+||||+.+|+.|++.++ +++||+++|||||||+|
T Consensus 221 a~~l~~l~~----eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~I 296 (517)
T 2o2p_A 221 ALKFAELTL----KAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296 (517)
T ss_dssp HHHHHHHHH----HTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEE
T ss_pred HHHHHHHHH----HhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEE
Confidence 999888765 6899999999999965 67888987 8999999999999999999999 99999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++
T Consensus 297 V~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~ 376 (517)
T 2o2p_A 297 IFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEY 376 (517)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCC--HHHHHHHHhcCCCCceeE
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gL~a~ 391 (522)
|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+| +||||+++|+++|||++|
T Consensus 377 i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~ 452 (517)
T 2o2p_A 377 CQRGVKEGATLVCGGNQV----PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG 452 (517)
T ss_dssp HHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCE
T ss_pred HHHHHHCCCEEEeccccC----CCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEE
Confidence 999999999999999742 13689999999999999999999999999999999999 999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
|||+|.++++++++++++|+|+||++.. ..+.+||||+|+||+|+++|.+|+++||+.|+|+.
T Consensus 453 v~t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~ 515 (517)
T 2o2p_A 453 VFTRDINKALYVSDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515 (517)
T ss_dssp EECSBHHHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred EeCCCHHHHHHHHHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEe
Confidence 9999999999999999999999998644 24579999999999999999999999999999975
No 17
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-97 Score=789.44 Aligned_cols=444 Identities=31% Similarity=0.520 Sum_probs=415.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH--HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~--~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
|+++++++.++.+++++++++|++|++ .|+.+|.++|.++|++++++|++++++|++++++|+||+..++...|+..+
T Consensus 34 g~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~ 113 (495)
T 3b4w_A 34 GEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGS 113 (495)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 689999999999999999999999999 899999999999999999999999999999999999999999865799999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++.++++.... .+.+ .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++
T Consensus 114 ~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~ 189 (495)
T 3b4w_A 114 MGAMNYFAGAADKVTWTE-TRTG---SYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTA 189 (495)
T ss_dssp HHHHHHHHTCGGGSCSEE-EEEE---TTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHH
T ss_pred HHHHHHHHHHHHHhcCCc-ccCC---CCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHH
Confidence 999999999988876532 2211 233568999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
..+++++. ++|+|+|++++|+|+.+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++
T Consensus 190 ~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~ 265 (495)
T 3b4w_A 190 NALAEVFA----EVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILE 265 (495)
T ss_dssp HHHHHHHH----HTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECT
T ss_pred HHHHHHHH----HhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECC
Confidence 99888776 689999999999995578999987 899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|++
T Consensus 266 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~ 345 (495)
T 3b4w_A 266 DVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAK 345 (495)
T ss_dssp TCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 346 a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 423 (495)
T 3b4w_A 346 GIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTD 423 (495)
T ss_dssp HHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSC
T ss_pred HHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCC
Confidence 99999999999974210 1258999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++++|+|+||++. ..+.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 424 ~~~a~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 424 VPKGIKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp HHHHHHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred HHHHHHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence 9999999999999999999875 345799999999999999999999999999999753
No 18
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=2.9e-97 Score=790.34 Aligned_cols=446 Identities=30% Similarity=0.470 Sum_probs=415.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|++++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 46 g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 124 (503)
T 1a4s_A 46 GRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQ 124 (503)
T ss_dssp CCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999984 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++++++++.. +..+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 125 ~~~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 200 (503)
T 1a4s_A 125 CIEYYAGLAPTLSG-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVI 200 (503)
T ss_dssp HHHHHHHHGGGCCE-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhcC-CcccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 99999999888754 222221 23467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+++++. ++|+|+|++++|+|+++.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++||
T Consensus 201 l~~l~~----~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dA 276 (503)
T 1a4s_A 201 LAEIFH----EAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDC 276 (503)
T ss_dssp HHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTS
T ss_pred HHHHHH----HhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCC
Confidence 888766 789999999999995577888987 79999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|++++
T Consensus 277 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~ 356 (503)
T 1a4s_A 277 ELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAK 356 (503)
T ss_dssp CHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCC--CCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 319 DKGAEILARGSFGHLSE--GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~--~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++|+++++||....... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 357 ~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 436 (503)
T 1a4s_A 357 KEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRD 436 (503)
T ss_dssp HHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSB
T ss_pred HCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCC
Confidence 99999999997421000 0358999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.+
T Consensus 437 ~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~ 495 (503)
T 1a4s_A 437 ISRAHRVAANLEAGTCYINTYSIS--PVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVE 495 (503)
T ss_dssp HHHHHHHHHHSCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEEC
T ss_pred HHHHHHHHHHCceeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEc
Confidence 999999999999999999997653 35699999999999999999999999999999874
No 19
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=4.5e-97 Score=787.85 Aligned_cols=443 Identities=28% Similarity=0.462 Sum_probs=416.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH---HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMT 77 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~---~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~ 77 (522)
|+++++++.++.+++++++++|++||+ .|+.++.++|.++|++++++|++++++|++++++|+||+..++...|+..
T Consensus 46 g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~ 125 (501)
T 1bxs_A 46 EEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGG 125 (501)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 689999999999999999999999999 89999999999999999999999999999999999999999886689999
Q ss_pred HHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 78 TCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 78 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
+++.++|+++.+++|.... .+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 126 ~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t 201 (501)
T 1bxs_A 126 CIKTLRYCAGWADKIQGRT-IPM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLT 201 (501)
T ss_dssp HHHHHHHHHHHGGGCCEEE-ECC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHhhCCe-eec---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHH
Confidence 9999999999998876542 221 123456899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh-cCCCceeeeCCCcceEE
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFI 233 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa-~~~~pv~lelgGk~p~i 233 (522)
+..+++++. ++|+|+|++|+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++ +++||+++|||||||+|
T Consensus 202 ~~~l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~i 277 (501)
T 1bxs_A 202 ALHMGSLIK----EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCI 277 (501)
T ss_dssp HHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEE
T ss_pred HHHHHHHHH----HhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEE
Confidence 998888765 6899999999999954 67899987 7999999999999999999999 99999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 234 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 234 V~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++
T Consensus 278 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~ 357 (501)
T 1bxs_A 278 VFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDL 357 (501)
T ss_dssp ECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 358 i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 433 (501)
T 1bxs_A 358 IESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIF 433 (501)
T ss_dssp HHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEE
Confidence 999999999999999732 1368999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|+|.++++++++++++|+|+||++... .+.+||||+|.||+|++||++||++||+.|+|+.+
T Consensus 434 t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 434 TNDIDKAITVSSALQSGTVWVNCYSVV--SAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp CSBHHHHHHHHHHSCCSEEEESCCCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred cCCHHHHHHHHHhcCeeEEEECCCCCC--CCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 999999999999999999999987543 35699999999999999999999999999999764
No 20
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=3.4e-97 Score=790.03 Aligned_cols=447 Identities=24% Similarity=0.369 Sum_probs=417.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++ .+|+..+++
T Consensus 47 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~ 125 (500)
T 2j6l_A 47 NEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVD 125 (500)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999999998 579999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++++++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 126 ~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 202 (500)
T 2j6l_A 126 ICDYAVGLSRMIGGP-ILPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVA 202 (500)
T ss_dssp HHHHHHHHTTTCCCB-EECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHhcCc-ccccc--CCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHH
Confidence 999999887765432 11111 112335778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+++++.++|.++|+|+|++++|+|+.+.+++|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++||
T Consensus 203 l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dA 282 (500)
T 2j6l_A 203 VTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDA 282 (500)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTC
T ss_pred HHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCC
Confidence 9999999999999999999999996678899986 89999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++
T Consensus 283 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~ 362 (500)
T 2j6l_A 283 DLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAK 362 (500)
T ss_dssp CHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 363 ~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 438 (500)
T 2j6l_A 363 KEGGTVVYGGKVM----DRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLG 438 (500)
T ss_dssp HTTCEEEECCSBC----SSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHH
T ss_pred HCCCEEEECCccc----CCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHH
Confidence 9999999999742 236899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH--HHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 399 RAREIA--AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 399 ~~~~~~--~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
++++++ .++++|+|+||++... ..+.+||||+|.||+|++||.+|+++||+.|+|+.
T Consensus 439 ~a~~~~~~~~~~~G~V~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 497 (500)
T 2j6l_A 439 RIFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTI 497 (500)
T ss_dssp HHHHHHSTTSCCSSEEEESSCTTC-CCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEE
T ss_pred HHHHHHhhccCCeeEEEECCCCcc-CCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEE
Confidence 999999 7799999999986543 34568999999999999999999999999999975
No 21
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.4e-97 Score=793.93 Aligned_cols=445 Identities=30% Similarity=0.456 Sum_probs=417.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTT 78 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~--~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~ 78 (522)
||++++++.++.+++++++++|++|+ ..|+.++.++|.++|++++++|++++++|++++++|+||+..++ ..|+..+
T Consensus 49 g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~ 127 (528)
T 3u4j_A 49 GEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFC 127 (528)
T ss_dssp TCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHH
Confidence 68999999999999999999999999 78999999999999999999999999999999999999999999 6899999
Q ss_pred HHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH
Q 009919 79 CEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 158 (522)
Q Consensus 79 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~ 158 (522)
++.++++++.++++.. +..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 128 ~~~l~~~a~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (528)
T 3u4j_A 128 ADLWSYAAGQARALEG-QTHNNI--GDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTS 204 (528)
T ss_dssp HHHHHHHHHHHTTCCE-EEECCS--CTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcC-eeeccC--CCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHH
Confidence 9999999999888753 222221 1245678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 159 CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 159 ~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
.++++++. ++|+|+|+||+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||+
T Consensus 205 ~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~ 280 (528)
T 3u4j_A 205 IRLAELAR----EAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVF 280 (528)
T ss_dssp HHHHHHHH----HHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEEC
T ss_pred HHHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEEC
Confidence 99888766 6799999999999954 78899987 79999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++++.++|+
T Consensus 281 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 360 (528)
T 3u4j_A 281 ADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVT 360 (528)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 361 ~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 437 (528)
T 3u4j_A 361 AGITSGAELLLGGERIG---REAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWST 437 (528)
T ss_dssp HHHHTTCEEEECCSEEC---TTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred HHHHCCCEEEeCCCcCC---CCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcC
Confidence 99999999999997421 117999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|.++++++++++++|+|+||++... .+.+||||+|.||+|++||++||++||+.|+|+.+.
T Consensus 438 d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 438 NLETALQTIRRIRAGRCWINSVIDG--TPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp BHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred CHHHHHHHHHhCCeeEEEECCCCCC--CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 9999999999999999999997543 457999999999999999999999999999998754
No 22
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=3.4e-97 Score=794.48 Aligned_cols=445 Identities=22% Similarity=0.382 Sum_probs=417.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 62 ~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~ 140 (538)
T 3qan_A 62 DQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAID 140 (538)
T ss_dssp TCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHH
T ss_pred CcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+.+++.++..+.. .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 141 ~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 217 (538)
T 3qan_A 141 FLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217 (538)
T ss_dssp HHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHH
T ss_pred HHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHH
Confidence 999999886666655544322 24668899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcC------CCceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT------LTPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~------~~pv~lelgGk~p 231 (522)
+++++. ++|+|+|+|++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++++ +||+++|||||||
T Consensus 218 l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p 293 (538)
T 3qan_A 218 FVEVLE----DAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDT 293 (538)
T ss_dssp HHHHHH----HTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCE
T ss_pred HHHHHH----HhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCc
Confidence 887765 7899999999999965 68899987 899999999999999999999998 9999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 294 ~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~ 373 (538)
T 3qan_A 294 VVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIM 373 (538)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHH
T ss_pred eEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 374 ~~i~~a~~~G-~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~ 448 (538)
T 3qan_A 374 SYIEIGKKEG-RLMTGGEGD----SSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGA 448 (538)
T ss_dssp HHHHHHHHHS-EEEECCCEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEE
T ss_pred HHHHHHHHCC-eEEeCCCcC----CCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEE
Confidence 9999999999 999999742 12699999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEcc
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|||+|.++++++++++++|+|+||+.......+.+||||+|.||+| ++||++||++||+.|+|+.+.
T Consensus 449 v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 449 VITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp EECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred EECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 9999999999999999999999996544443567999999999999 999999999999999998754
No 23
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=8.5e-97 Score=784.19 Aligned_cols=443 Identities=28% Similarity=0.451 Sum_probs=416.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 32 g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 110 (479)
T 2imp_A 32 EAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTAD 110 (479)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++..+.. +.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 111 ~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 187 (479)
T 2imp_A 111 YIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIA 187 (479)
T ss_dssp HHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 99999999888765432 211 123467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++++|+|++ +.+++|++ ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 188 l~~l~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~d 263 (479)
T 2imp_A 188 FAKIVD----EIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDD 263 (479)
T ss_dssp HHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTT
T ss_pred HHHHHH----HhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCC
Confidence 888776 6899999999999975 57888887 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA-GKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~-~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ +++++|||+++.+++++.++|++
T Consensus 264 ADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~ 343 (479)
T 2imp_A 264 ADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVAR 343 (479)
T ss_dssp SCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 89999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 344 a~~~Ga~~~~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d 419 (479)
T 2imp_A 344 AVEEGARVAFGGKAV----EGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419 (479)
T ss_dssp HHHTTCEEEECCCCC----CSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCC
T ss_pred HHHCCCEEEECCccc----CCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCC
Confidence 999999999999742 2358999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++++|+|+||++..+ .+.+||||+|+||+|++||++||++||+.|+|+.+
T Consensus 420 ~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 420 LNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999999999999999997665 35799999999999999999999999999999753
No 24
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=9.6e-97 Score=784.59 Aligned_cols=441 Identities=28% Similarity=0.456 Sum_probs=411.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|++++++|+++.++|++++++|+||+..++...|+..+++
T Consensus 51 g~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~ 130 (497)
T 3i44_A 51 EEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSS 130 (497)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999997679999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEE-EeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE-FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~ 159 (522)
.++++++.+..+..+.... .+...+++ ++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 131 ~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 205 (497)
T 3i44_A 131 HIRNFIKAYKEFSFQEALI-----EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAM 205 (497)
T ss_dssp HHHHHHHHHHHCCSEEESS-----TTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHhhccccccccc-----CCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHH
Confidence 9999998877765433211 13446788 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
.+++++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.+++++||+++|||||||+||++
T Consensus 206 ~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~ 281 (497)
T 3i44_A 206 LFAEILD----EAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFA 281 (497)
T ss_dssp HHHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECC
Confidence 8888765 7899999999999965 78899987 899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.+++++.++|++
T Consensus 282 dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~ 360 (497)
T 3i44_A 282 DAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQS 360 (497)
T ss_dssp TSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHH
T ss_pred Chh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 361 a~~~Ga~v~~gG~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d 439 (497)
T 3i44_A 361 GIDEGATLVTGGTGLPM-GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQD 439 (497)
T ss_dssp HHHTTCEEEECCSSCCT-TCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSC
T ss_pred HHHCCCEEEECCCcCCC-cCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 99999999999942111 12369999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
.++++++++++++|+|+||+. ...+.+||||+|.||+|+++|++||++||+.|+|+
T Consensus 440 ~~~a~~~a~~l~aG~V~iN~~---~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 440 RSKCRRIAAQVRSGMVEVNGH---ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHHHHHSCCSEEEETTC---CCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHHHHHHHHhCCcCeEEECCC---CCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 999999999999999999952 23456999999999999999999999999999985
No 25
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.6e-97 Score=788.83 Aligned_cols=456 Identities=28% Similarity=0.408 Sum_probs=423.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+||+..+. .|+...++
T Consensus 16 g~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~--~ev~~~~~ 93 (474)
T 4h7n_A 16 GKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITV--LEIDSFLA 93 (474)
T ss_dssp CSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHHH--HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999999986443 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++....++++........ .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~ 171 (474)
T 4h7n_A 94 SIDRWCGLAPELLQTSAKNTSI--PFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAP 171 (474)
T ss_dssp HHHHHHHHHHHHHCCEEEECSS--TTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHH
T ss_pred HHHHHHhhhhhcccccccCCCC--CCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHH
Confidence 9999988887777655433221 23455678899999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhcCccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCH
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDV 240 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl 240 (522)
+.+++. ++|+|+|++++++|+.+.+..|+.++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|||+
T Consensus 172 l~~~~~----~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl 247 (474)
T 4h7n_A 172 LLMALN----TVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANL 247 (474)
T ss_dssp HHHHHT----TCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCH
T ss_pred HHhhhh----hhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhH
Confidence 777654 7899999999999988889999889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc
Q 009919 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK 320 (522)
Q Consensus 241 ~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~ 320 (522)
+.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++
T Consensus 248 ~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 327 (474)
T 4h7n_A 248 ELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEK 327 (474)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHH
Q 009919 321 GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 400 (522)
Q Consensus 321 Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~ 400 (522)
|+++++||... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 328 ga~v~~Gg~~~---~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 404 (474)
T 4h7n_A 328 GAVIHCGGKVE---ELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEA 404 (474)
T ss_dssp TCEEEECCCCE---EETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHH
T ss_pred CceeccCCccc---ccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHH
Confidence 99999998742 134689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEcccccccccCCCCCCCC
Q 009919 401 REIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQY 473 (522)
Q Consensus 401 ~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~ 473 (522)
+++++++++|+|+||+...+...+.+||||+|.||+| +++|.+||++||+.|+|+.+.. ..+.|+||
T Consensus 405 ~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~------~~~~p~w~ 472 (474)
T 4h7n_A 405 LKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTN------STSDPWWF 472 (474)
T ss_dssp HHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECS------SSCCTTSC
T ss_pred HHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCC------CCCCCCCc
Confidence 9999999999999999888777778999999999998 7899999999999999988763 34567776
No 26
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.9e-96 Score=786.27 Aligned_cols=446 Identities=26% Similarity=0.440 Sum_probs=415.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|++++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 52 g~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 130 (515)
T 2d4e_A 52 NEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAE 130 (515)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999997 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 131 ~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 207 (515)
T 2d4e_A 131 NFAFYAEYAEHAMED-RTFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATK 207 (515)
T ss_dssp HHHHHHTTGGGTTCE-EECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhcCc-ccccC--CCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHH
Confidence 999999988887542 22221 123467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++|+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 208 l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~d 283 (515)
T 2d4e_A 208 LAEILK----EADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFAD 283 (515)
T ss_dssp HHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTT
T ss_pred HHHHHH----HhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCC
Confidence 888766 7899999999999965 67888987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+++
T Consensus 284 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a 363 (515)
T 2d4e_A 284 ADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAG 363 (515)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCC----CCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 318 LDKGAEILARGSFGHL----SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~----~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
+++|+++++||..... +....|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 364 ~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 442 (515)
T 2d4e_A 364 KREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVF 442 (515)
T ss_dssp HHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEE
T ss_pred HHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEE
Confidence 9999999999974210 0012589999999999 9999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
|+|.++++++++++++|+|+||++.. ..+.+||||+|+||+|++||++||++||+.|+|+.+
T Consensus 443 t~d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~ 504 (515)
T 2d4e_A 443 TRDLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALP 504 (515)
T ss_dssp CSBHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEE
T ss_pred CCCHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEc
Confidence 99999999999999999999998754 345799999999999999999999999999999875
No 27
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.2e-96 Score=783.37 Aligned_cols=441 Identities=27% Similarity=0.446 Sum_probs=413.0
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++...|+..+++
T Consensus 48 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~ 127 (495)
T 1wnd_A 48 GDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVD 127 (495)
T ss_dssp TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986449999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++.. +..+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 128 ~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~ 204 (495)
T 1wnd_A 128 VFRFFAGAARCLNG-LAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 204 (495)
T ss_dssp HHHHHHHHTTCCEE-ECBEEE--ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHhcC-ccccCC--CCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHH
Confidence 99999999888743 222211 123456899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++ +|+|++|+|+|+ .+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|
T Consensus 205 l~~l~~----ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~d 279 (495)
T 1wnd_A 205 LAELAK----DI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDD 279 (495)
T ss_dssp HHHHHT----TT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTT
T ss_pred HHHHHH----Hh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCc
Confidence 988876 56 999999999995 477899998 7999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 280 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a 359 (495)
T 1wnd_A 280 ADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEA 359 (495)
T ss_dssp SCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcC-CcEeeccC-CCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 318 LDKG-AEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 318 ~~~G-a~v~~gG~-~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 360 ~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 434 (495)
T 1wnd_A 360 KATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTK 434 (495)
T ss_dssp HHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECS
T ss_pred HhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECC
Confidence 9999 99999986 31 25899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
|.++++++++++++|+|+||++... .+.+||||+|.||+|++||.+||++||+.|+|+.
T Consensus 435 d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~ 493 (495)
T 1wnd_A 435 DVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMV 493 (495)
T ss_dssp BHHHHHHHHHHCCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred CHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEe
Confidence 9999999999999999999987542 3579999999999999999999999999999975
No 28
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=2.2e-96 Score=778.75 Aligned_cols=443 Identities=29% Similarity=0.508 Sum_probs=418.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|+..|+.++.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++
T Consensus 17 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 95 (462)
T 3etf_A 17 GQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSAA 95 (462)
T ss_dssp CCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++...++..+... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+
T Consensus 96 ~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~ 171 (462)
T 3etf_A 96 LCDWYAEHGPAMLNPEPT----LVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQM 171 (462)
T ss_dssp HHHHHHHHHHHHTSCEEC----SSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHH
T ss_pred HHHHHHHhHHHhcCCccc----CCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHH
Confidence 999999988877654421 1234567899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+.+++. ++|+|+|++|+|+|+.+.+++|++ ++|.|+||||+.+|+.|++.++++++|+++|||||||+||++||
T Consensus 172 l~~~l~----~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dA 247 (462)
T 3etf_A 172 IARILA----EAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDA 247 (462)
T ss_dssp HHHHHH----HTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTS
T ss_pred HHHHHH----HhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCC
Confidence 887754 789999999999998788888887 89999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL 318 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~ 318 (522)
|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||++..+++++.+++++++
T Consensus 248 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 327 (462)
T 3etf_A 248 DLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASV 327 (462)
T ss_dssp CHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHH
Q 009919 319 DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 319 ~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 328 ~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~ 403 (462)
T 3etf_A 328 AEGARLLLGGEKI----AGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDT 403 (462)
T ss_dssp HTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHH
T ss_pred HCCCEEEeCCccc----CCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 9999999999743 246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
.++++++++++|+|+||++... .+.+||||+|.||+|++||++||++||+.|+|+.++
T Consensus 404 ~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 404 LAAEMAARLECGGVFINGYSAS--DARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp HHHHHHHHCCSSEEEESSCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHhCCcceEEECCCCCC--CCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 9999999999999999997543 456999999999999999999999999999998764
No 29
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=5.1e-96 Score=778.62 Aligned_cols=442 Identities=29% Similarity=0.516 Sum_probs=413.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++
T Consensus 35 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~ 113 (481)
T 3jz4_A 35 GDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAAS 113 (481)
T ss_dssp CCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++....+.... ..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 114 ~~~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~ 190 (481)
T 3jz4_A 114 FIEWFAEEGKRIYGD-TIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 190 (481)
T ss_dssp HHHHHHHHGGGCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhcCc-ccccc--CCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence 999998876654321 11111 134567899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+.+++. ++|+|+|+|++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 191 l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~d 266 (481)
T 3jz4_A 191 LAELAI----RAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDD 266 (481)
T ss_dssp HHHHHH----HHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTT
T ss_pred HHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCC
Confidence 888765 6799999999999964 77899987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 267 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a 346 (481)
T 3jz4_A 267 ADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADA 346 (481)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 347 ~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 422 (481)
T 3jz4_A 347 LEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDL 422 (481)
T ss_dssp HHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBH
T ss_pred HHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCH
Confidence 99999999999742 24689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~ 456 (522)
++++++++++++|+|+||++... .+.+||||+|+||+|++||++||++||+.|+|+.
T Consensus 423 ~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~ 479 (481)
T 3jz4_A 423 SRVFRVGEALEYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI 479 (481)
T ss_dssp HHHHHHHHHCCCSEEEESCSCCC--CSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHhCCeeeEEECCCCCC--CCCCCcCCcccCcCCCCchHHHHHHhhceeEEEE
Confidence 99999999999999999997553 4569999999999999999999999999999975
No 30
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=4e-96 Score=783.17 Aligned_cols=455 Identities=28% Similarity=0.390 Sum_probs=401.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 38 g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~ 116 (508)
T 3r64_A 38 DSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGN 116 (508)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH-H
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-C 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~-~ 159 (522)
.++++++..+++.. ..+.. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ .
T Consensus 117 ~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 193 (508)
T 3r64_A 117 ITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGV 193 (508)
T ss_dssp HHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTH
T ss_pred HHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHH
Confidence 99999988776433 22211 11245678999999999999999999999999999999999999999999999999 8
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhc--CCCceeeeCCCcceEEE
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASK--TLTPVTLELGGKDAFIV 234 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~--~~~pv~lelgGk~p~iV 234 (522)
++.+++ .++|+|+|++++|+|+ .+.+++|++ .+|+|+||||+.+|+.|++.+++ ++||+++|||||||+||
T Consensus 194 ~l~~ll----~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV 269 (508)
T 3r64_A 194 IPARIF----EEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVV 269 (508)
T ss_dssp HHHHHH----HTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEE
T ss_pred HHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEE
Confidence 887765 4899999999999997 578999987 89999999999999999999999 99999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLV 314 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i 314 (522)
++|||++.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.+++
T Consensus 270 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i 349 (508)
T 3r64_A 270 LADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKI 349 (508)
T ss_dssp CTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEec
Q 009919 315 NDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 394 (522)
Q Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s 394 (522)
++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 350 ~~a~~~Ga~v~~gG~-------~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 422 (508)
T 3r64_A 350 ELAKKEGATVQVEGP-------IEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWS 422 (508)
T ss_dssp HHHHTTTCEEEECCC-------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEEC
T ss_pred HHHHHcCCEEEecCC-------CCCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEc
Confidence 999999999999997 2689999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcccccccccCCCCCCCCC
Q 009919 395 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYP 474 (522)
Q Consensus 395 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p 474 (522)
+|.+.++++++++++|+|+||++..+ ..+.+||||+|.||+|++||++||++||+.|+|+.+.... ..+.+.||+
T Consensus 423 ~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~~~----~~~~~~~~~ 497 (508)
T 3r64_A 423 KDIDRAAQFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRSAE----NLYFQSHHH 497 (508)
T ss_dssp SCHHHHHHHHTTSCSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEECCST----TCCCC----
T ss_pred CCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecccc----hhcchhhcc
Confidence 99999999999999999999998655 3567999999999999999999999999999998865321 223346775
Q ss_pred C
Q 009919 475 V 475 (522)
Q Consensus 475 ~ 475 (522)
-
T Consensus 498 ~ 498 (508)
T 3r64_A 498 H 498 (508)
T ss_dssp -
T ss_pred C
Confidence 4
No 31
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=2.5e-96 Score=782.89 Aligned_cols=442 Identities=25% Similarity=0.376 Sum_probs=413.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHH-HhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~-~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++.+++++++++|++|++ .|+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..++
T Consensus 42 g~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 120 (501)
T 1uxt_A 42 LATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAV 120 (501)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 689999999999999999999999999 99999999999999999999999999999999999999999996 7999999
Q ss_pred HHHHHHHHccccccCcccccCCcccc--cccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGRSMI--HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWS 157 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~ 157 (522)
+.++++++.++++.. +..+...... +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 121 ~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 199 (501)
T 1uxt_A 121 DRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLP 199 (501)
T ss_dssp HHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHH
T ss_pred HHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHH
Confidence 999999998887643 2222211011 2356899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEc
Q 009919 158 GCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVC 235 (522)
Q Consensus 158 ~~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~ 235 (522)
+.++++++. ++|+|+|++++|+|+++.+++|++ .+|+|+||||+.+|+.|++.++ +||+++|||||||+||+
T Consensus 200 ~~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~ 273 (501)
T 1uxt_A 200 AAMAVKALL----DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVL 273 (501)
T ss_dssp HHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEEC
T ss_pred HHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEEC
Confidence 999888766 689999999999997777888987 8999999999999999999988 99999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHH
Q 009919 236 DDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 236 ~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
+|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++|+
T Consensus 274 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~ 353 (501)
T 1uxt_A 274 EDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIE 353 (501)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCC-cccccEEEecCC---CCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 316 DALDKGAEILARGSFGHLSEGAVD-QYFPPTVIVNVN---HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~-~~~~Ptvl~~~~---~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
+++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 354 ~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~ 426 (501)
T 1uxt_A 354 DAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAA 426 (501)
T ss_dssp HHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEE
T ss_pred HHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEE
Confidence 999999999999972 57 899999999999 9999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|||+|.++++++++++++|+|+||+++ +...+.+||||+|+||+|++||.+||++||+.|+|+.+.
T Consensus 427 v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 427 VFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp EECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred EeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec
Confidence 999999999999999999999999874 334567999999999999999999999999999998753
No 32
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=6.6e-96 Score=780.00 Aligned_cols=448 Identities=29% Similarity=0.468 Sum_probs=417.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.++.++|.++|+++++.|+++.++|++++++|+||+..++...|+..+++
T Consensus 32 g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~ 111 (490)
T 2ve5_A 32 GEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGAD 111 (490)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996559999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++.. ...+. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+
T Consensus 112 ~~~~~a~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~ 187 (490)
T 2ve5_A 112 VLEYYAGLVPAIEG-EQIPL---RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALK 187 (490)
T ss_dssp HHHHHHHHGGGCCE-EEEEE---ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhcC-ccccC---CCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 99999988876532 22221 134567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHH-hcCCCceeeeCCCcceEEEcC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~a-a~~~~pv~lelgGk~p~iV~~ 236 (522)
+++++. ++|+|+|++++|+|. .+.++.|+. .+|+|+||||+.+|+.|++.+ +++++|+++|||||||+||++
T Consensus 188 l~~l~~----~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~ 263 (490)
T 2ve5_A 188 LAEIYT----EAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFP 263 (490)
T ss_dssp HHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECT
T ss_pred HHHHHH----HhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCCCceeEECC
Confidence 888766 679999999999995 478899987 799999999999999999999 999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 264 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~ 343 (490)
T 2ve5_A 264 DADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIES 343 (490)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 344 a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 423 (490)
T 2ve5_A 344 GKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQD 423 (490)
T ss_dssp HHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSB
T ss_pred HHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999999985322112468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
.++++++++++++|+|+||++... .+.+||||+|.||+|++||.+||++||+.|+|+.+.
T Consensus 424 ~~~a~~~~~~l~aG~v~vN~~~~~--~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 424 LARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEcc
Confidence 999999999999999999997553 357999999999999999999999999999998653
No 33
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=2.7e-96 Score=780.60 Aligned_cols=442 Identities=29% Similarity=0.490 Sum_probs=413.8
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+++|.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++
T Consensus 36 g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 114 (487)
T 2w8n_A 36 GAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAF 114 (487)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 59999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.++++.. +..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 115 ~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 191 (487)
T 2w8n_A 115 FLEWFSEEARRVYG-DIIHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALA 191 (487)
T ss_dssp HHHHHHHHGGGCCC-EEECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHHhcC-cccccC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence 99999988877432 222221 124567899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeec---Ccc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE
Q 009919 161 YFRIIQAALAAVGAPENLVDVIT---GFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 234 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~---g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV 234 (522)
+++++. ++|+|+|++|+|+ |++ +.+++|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||
T Consensus 192 l~~l~~----~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV 267 (487)
T 2w8n_A 192 LAELAS----QAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIV 267 (487)
T ss_dssp HHHHHH----HHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEE
T ss_pred HHHHHH----HhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEE
Confidence 888765 6899999999999 854 67889987 7999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHh-ccCCCCCCCCCcccccCCHHHHHHHHHH
Q 009919 235 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 235 ~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.++++++|||+++.+++++.++
T Consensus 268 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 347 (487)
T 2w8n_A 268 FDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQ 347 (487)
T ss_dssp CTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCc-ccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEE
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQ-YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~-~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v 392 (522)
|++++++|+++++||.. ...|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 348 i~~a~~~Ga~~~~gg~~-----~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v 422 (487)
T 2w8n_A 348 VNDAVSKGATVVTGGKR-----HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYF 422 (487)
T ss_dssp HHHHHTTTCEEEECCSB-----CTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEE
T ss_pred HHHHHHCCCEEEeCCcc-----CCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEE
Confidence 99999999999999973 23588 9999999999999999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
||+|.+.++++++++++|+|+||++..+. +.+||||+|.||+|++||++||++||+.|+|+.+
T Consensus 423 ~t~d~~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 423 YSQDPAQIWRVAEQLEVGMVGVNEGLISS--VECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp ECCCHHHHHHHHHHSCSSEEEESCSCCCC--TTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred eCCCHHHHHHHHHhCCeeeEEEcCCCCCC--CCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 99999999999999999999999976653 4599999999999999999999999999999764
No 34
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2.7e-96 Score=775.98 Aligned_cols=439 Identities=28% Similarity=0.400 Sum_probs=404.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+++|.++|.++|++++++|++++++|++++++|+||+..++..+|+..+++
T Consensus 16 ~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~ 95 (457)
T 3lns_A 16 DDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLH 95 (457)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHH
T ss_pred CCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999997679999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+++|..++....+....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+
T Consensus 96 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 175 (457)
T 3lns_A 96 EIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAV 175 (457)
T ss_dssp HHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHH
T ss_pred HHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 99999999988887654443332334678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc-CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 239 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daD 239 (522)
+++++.++ +|+|+||+|+|+.+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++|||
T Consensus 176 l~~l~~~a-----lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dAD 250 (457)
T 3lns_A 176 IEKIIAEA-----FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDAD 250 (457)
T ss_dssp HHHHHHHH-----CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCC
T ss_pred HHHHHHHh-----CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCC
Confidence 99988753 999999999997788999998 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHH
Q 009919 240 VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 319 (522)
Q Consensus 240 l~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~ 319 (522)
++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++|||+++++++++.++++++
T Consensus 251 l~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a-- 323 (457)
T 3lns_A 251 LDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT-- 323 (457)
T ss_dssp HHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc--
Confidence 999999999999999999999999999999999999999999999987 5544 999999999999999999985
Q ss_pred cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhc-CCCCceeEEecCcHH
Q 009919 320 KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND-SRYGLGCAVFSGSQH 398 (522)
Q Consensus 320 ~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gL~a~v~s~d~~ 398 (522)
++++++||.. ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.+
T Consensus 324 -~~~~~~gg~~-----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~ 397 (457)
T 3lns_A 324 -QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMD 397 (457)
T ss_dssp -CSEEEECCCE-----EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHH
T ss_pred -CCeEEeCCcc-----CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHH
Confidence 3699999973 246899999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
.++++++++++|+|+||++..+...+.+||||+|.||+|++||++||++||+.|+|+..
T Consensus 398 ~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 398 VAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp HHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred HHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999999999999999986665567799999999999999999999999999999764
No 35
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=2.2e-95 Score=778.93 Aligned_cols=443 Identities=25% Similarity=0.383 Sum_probs=413.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 62 ~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 140 (516)
T 1uzb_A 62 SEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAID 140 (516)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999996 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|+++.++++..+...... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 218 (516)
T 1uzb_A 141 FIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAK 218 (516)
T ss_dssp HHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHhcCCcccccC--CCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHH
Confidence 999999998888764321111 123466899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh------cCCCceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa------~~~~pv~lelgGk~p 231 (522)
+++++. ++|+|+|++++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++ +++||+++|||||||
T Consensus 219 l~~l~~----eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p 294 (516)
T 1uzb_A 219 VFEIFH----EAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNA 294 (516)
T ss_dssp HHHHHH----HHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEE
T ss_pred HHHHHH----HhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccc
Confidence 888766 6899999999999954 67899987 7999999999999999999998 889999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| ++++++|||+++.+++++.
T Consensus 295 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~ 373 (516)
T 1uzb_A 295 IIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVL 373 (516)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHH
T ss_pred eeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 374 ~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~ 448 (516)
T 1uzb_A 374 SYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGG 448 (516)
T ss_dssp HHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEE
Confidence 9999999888 899999731 23689999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCC-cchHHHHHhchhceEEEE
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVE 456 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~~l~~ft~~k~v~~ 456 (522)
|||+|.++++++++++++|+|+||++..+...+.+||||+|.||+|+ .+|.+++++||+.|+|+.
T Consensus 449 v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~ 514 (516)
T 1uzb_A 449 VYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514 (516)
T ss_dssp EECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEE
T ss_pred EECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEe
Confidence 99999999999999999999999997666555679999999999995 679999999999999975
No 36
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3.2e-95 Score=773.76 Aligned_cols=443 Identities=28% Similarity=0.435 Sum_probs=392.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++
T Consensus 32 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 110 (485)
T 4dng_A 32 QSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIA 110 (485)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 49999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHH-H
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-C 159 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~-~ 159 (522)
.++++++..++. .....+.. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ .
T Consensus 111 ~~~~~a~~~~~~-~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~ 188 (485)
T 4dng_A 111 ILDEAMTYTGEL-GGVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGT 188 (485)
T ss_dssp HHHHHHHHGGGC-SCEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTH
T ss_pred HHHHHHHHHHHh-CCeecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHH
Confidence 999999887653 22222211 11245678999999999999999999999999999999999999999999999999 8
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
++.+++. ++|+|+|++++|+|++ +.+++|++ .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++
T Consensus 189 ~l~~~l~----~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~ 264 (485)
T 4dng_A 189 IIAKAFE----HAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLS 264 (485)
T ss_dssp HHHHHHH----HTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECT
T ss_pred HHHHHHH----HhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcC
Confidence 7777654 7899999999999976 58899987 899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 316 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~ 316 (522)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 265 dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~ 344 (485)
T 4dng_A 265 DADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQ 344 (485)
T ss_dssp TSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCc
Q 009919 317 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 396 (522)
Q Consensus 317 a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d 396 (522)
++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 345 a~~~Ga~v~~gg~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d 417 (485)
T 4dng_A 345 AKTDGIELAVEGK-------RVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSD 417 (485)
T ss_dssp HHHTTCEEEECCC-------EETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSC
T ss_pred HHHCCCEEEeCCC-------CCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCC
Confidence 9999999999997 268999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 397 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 397 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
.++++++++++++|+|+||++..+ ..+.+||||+|.||+|++||++||++||+.|+|+.+.
T Consensus 418 ~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 418 LEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp HHHHHHHHTTSCSSEEEESCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 999999999999999999998655 3467999999999999999999999999999998643
No 37
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=4.5e-95 Score=770.19 Aligned_cols=437 Identities=32% Similarity=0.479 Sum_probs=409.6
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.+|.++|.++|++++++|+++.++|++++++|+||+..++. .|+..+++
T Consensus 28 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 106 (475)
T 1euh_A 28 GAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAE 106 (475)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999985 79999999
Q ss_pred HHHHHHHccccccCcccccCCccccc----ccc-eEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCch
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIH----KKA-KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS 155 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~ 155 (522)
.+++++++++++.... .+.+ ..+ ... ++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 107 ~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp 183 (475)
T 1euh_A 107 IINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183 (475)
T ss_dssp HHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTH
T ss_pred HHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcCh
Confidence 9999999888775432 1211 112 345 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceE
Q 009919 156 WSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 232 (522)
Q Consensus 156 ~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~ 232 (522)
.++.++++++. ++|+|+|++++|+|++ +.+++|++ ++|+|+||||+.+|+.|++.++ ++|+++|||||||+
T Consensus 184 ~t~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~ 257 (475)
T 1euh_A 184 ISGLLLAEAFA----EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSA 257 (475)
T ss_dssp HHHHHHHHHHH----HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEE
T ss_pred HHHHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeE
Confidence 99999888766 6899999999999975 57888987 7999999999999999999988 89999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHH
Q 009919 233 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQN 312 (522)
Q Consensus 233 iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~ 312 (522)
||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++|||+++++++++.+
T Consensus 258 iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~ 336 (475)
T 1euh_A 258 IVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEG 336 (475)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred HHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEE
Q 009919 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 313 ~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v 392 (522)
++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 337 ~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v 409 (475)
T 1euh_A 337 LINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASI 409 (475)
T ss_dssp HHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEE
T ss_pred HHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEE
Confidence 999999999999999872 5899999999999999999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecC-CcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~-~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
||+|.++++++++++++|+|+||+ +..+ .+.+||||+|.||+|++||++||++||+.|+|+.+
T Consensus 410 ~t~d~~~~~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 410 FTNDFPRAFGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp ECSCHHHHHHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred EeCCHHHHHHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 999999999999999999999999 5443 35799999999999999999999999999999763
No 38
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=6.5e-95 Score=770.49 Aligned_cols=444 Identities=22% Similarity=0.348 Sum_probs=410.9
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+++|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 31 ~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~ 109 (486)
T 1t90_A 31 KEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIE 109 (486)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999985 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...+ ++..+..+.. ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..
T Consensus 110 ~~~~~a~~~~-~~~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 186 (486)
T 1t90_A 110 NVEFAAGAPS-LMMGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEK 186 (486)
T ss_dssp HHHHHTTHHH-HHCEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHH
T ss_pred HHHHHHHHHH-HhcCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence 9999875433 3333322111 123456889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDV 238 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~da 238 (522)
+++++. ++|+|+|++++|+|+.+.+++|++ .+|+|+||||+.+|+.|++.+++++||+++|||||||+||++||
T Consensus 187 l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dA 262 (486)
T 1t90_A 187 LVELFE----KAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDA 262 (486)
T ss_dssp HHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTS
T ss_pred HHHHHH----HhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCC
Confidence 888766 689999999999997778899987 79999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCcccCCe-eEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 239 DVPHVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 239 Dl~~aa~~i~~~~~~n~Gq~C~a~~~-v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
|++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 263 Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a 341 (486)
T 1t90_A 263 NLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKG 341 (486)
T ss_dssp CHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 342 ~~~Ga~~~~gg~~~---~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~ 418 (486)
T 1t90_A 342 LEEGARLVCDGREN---VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNS 418 (486)
T ss_dssp HHHTCEEEECSSSS---CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBH
T ss_pred HhCCCEEEeCCccC---CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCH
Confidence 99999999999742 123689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC--CcchHHHHHhchhceEEEEc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~~g~~~l~~ft~~k~v~~~ 457 (522)
++++++++++++|+|+||++. +...+.+||||+|.||+| ++||++|+++||+.|+|+.+
T Consensus 419 ~~a~~~~~~l~aG~v~vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~ 479 (486)
T 1t90_A 419 NAIRYFRENIDAGMLGINLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479 (486)
T ss_dssp HHHHHHHHHCCCSEEEESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHhCCcCeEEECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 999999999999999999853 333457999999999999 89999999999999999864
No 39
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=4.3e-95 Score=771.48 Aligned_cols=439 Identities=27% Similarity=0.451 Sum_probs=391.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+||+..++...|+..+++
T Consensus 33 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~ 112 (478)
T 3ty7_A 33 EEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLN 112 (478)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996689999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++.+.++.... .....++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+
T Consensus 113 ~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 184 (478)
T 3ty7_A 113 HFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVI 184 (478)
T ss_dssp HHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHH
Confidence 9999999888765432 12457889999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++++|+|++ +.++.|+. .+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|
T Consensus 185 l~~~~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~d 260 (478)
T 3ty7_A 185 LAEIFD----KVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDD 260 (478)
T ss_dssp HHHHHH----HHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTT
T ss_pred HHHHHH----HhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCC
Confidence 888766 6799999999999965 78899987 8999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++|||+++++++++.++++++
T Consensus 261 ADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 340 (478)
T 3ty7_A 261 VDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKG 340 (478)
T ss_dssp SCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 341 ~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~ 419 (478)
T 3ty7_A 341 IEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDK 419 (478)
T ss_dssp HHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCH
T ss_pred HHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 999999999994221 1124789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
+.++++++++++|+|+||+ .. ..+.+||||+|.||+|++||++||++||+.|+|+
T Consensus 420 ~~a~~~~~~l~~G~v~vN~-~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 420 ETLHKVARSIEAGTVEINE-AG--RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp HHHHHHHHHSCSSEEEETT-CC------------------------CCGGGEEEEEEE
T ss_pred HHHHHHHHhCCcCeEEECC-CC--CCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 9999999999999999999 22 3456899999999999999999999999999987
No 40
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1.4e-93 Score=768.05 Aligned_cols=457 Identities=21% Similarity=0.290 Sum_probs=418.3
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh-HHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH-QELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~-~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++.+++++++++|++|++.|+.++.++|.++|++++++|+++ +++|++++++|+||+..++...|+..++
T Consensus 88 ~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~ 167 (563)
T 4e3x_A 88 AHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELI 167 (563)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999998 9999999999999999999754499999
Q ss_pred HHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHH
Q 009919 80 EKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 159 (522)
Q Consensus 80 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~ 159 (522)
+.++++++.++++........+ .....+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.
T Consensus 168 ~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~ 243 (563)
T 4e3x_A 168 DFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASY 243 (563)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHH
Confidence 9999999988877654332221 123345667778999999999999999999999999 599999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCc------eeeeCCCcc
Q 009919 160 FYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP------VTLELGGKD 230 (522)
Q Consensus 160 ~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~p------v~lelgGk~ 230 (522)
.+++++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.++++++| +++||||||
T Consensus 244 ~l~~ll~----eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~ 319 (563)
T 4e3x_A 244 AVYRILR----EAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKN 319 (563)
T ss_dssp HHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCE
T ss_pred HHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCC
Confidence 8888765 7899999999999976 57899987 899999999999999999999999985 999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCC-CCCCCcccccCCHHHHHH
Q 009919 231 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLEHSEK 309 (522)
Q Consensus 231 p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~-~~~~~~~g~li~~~~~~~ 309 (522)
|+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+| .++++++||++++.++++
T Consensus 320 p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~r 399 (563)
T 4e3x_A 320 FHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFAR 399 (563)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHH
T ss_pred ceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHH-cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCC--HHHHHHHH-hcCC
Q 009919 310 LQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLA-NDSR 385 (522)
Q Consensus 310 ~~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~ 385 (522)
+.++|+++++ +|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |+++
T Consensus 400 v~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~ 475 (563)
T 4e3x_A 400 IKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTS 475 (563)
T ss_dssp HHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSS
T ss_pred HHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCC
Confidence 9999999996 899999999732 24699999999999999999999999999999999997 79999999 7999
Q ss_pred CCceeEEecCcHHHHHHHHHHhc--cCCeeecCCcccCCCCCCCccCCCCCCCC-CcchHHHHHhchhceEEEEcccccc
Q 009919 386 YGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRWWPY 462 (522)
Q Consensus 386 ~gL~a~v~s~d~~~~~~~~~~l~--~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~g~~~l~~ft~~k~v~~~~~~~~ 462 (522)
|||++||||+|.+.+++++++++ +|+|+||+..+....+.+||||+|.||+| +.+|.+++++|+..|+|..+ +
T Consensus 476 yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~--- 551 (563)
T 4e3x_A 476 YGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-H--- 551 (563)
T ss_dssp EESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-C---
T ss_pred CCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-C---
Confidence 99999999999999999999976 99999999876655567999999999998 89999999999999999875 3
Q ss_pred cccCCCCCCCCCCC
Q 009919 463 IKTKIPKPIQYPVA 476 (522)
Q Consensus 463 ~~~~~~~~~~~p~~ 476 (522)
..+.++|||+.
T Consensus 552 ---~~~~~~~yp~~ 562 (563)
T 4e3x_A 552 ---KPLGDWRYSYM 562 (563)
T ss_dssp ---SCCCCSSCTTC
T ss_pred ---cCCCcccCCCC
Confidence 23567899974
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.8e-91 Score=744.81 Aligned_cols=437 Identities=22% Similarity=0.340 Sum_probs=406.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
||++++++.++.+++++++++|++|+..|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 30 g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~ 108 (490)
T 3ju8_A 30 QGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVN 108 (490)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999996 79999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++++++..+++....... ..+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 184 (490)
T 3ju8_A 109 KVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAEL 184 (490)
T ss_dssp HHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHH
Confidence 9999988776654432211 113455778999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCce-eeeCCCcceEEEcCC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV-TLELGGKDAFIVCDD 237 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv-~lelgGk~p~iV~~d 237 (522)
+++++. ++|+|+|++++|+|+.+.+++|++ ++|+|+||||+.+|+.|++.++++++|+ ++|||||||+||++|
T Consensus 185 l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~d 260 (490)
T 3ju8_A 185 TLKAWI----QAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEV 260 (490)
T ss_dssp HHHHHH----HTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCC
T ss_pred HHHHHH----HhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCC
Confidence 887765 789999999999997788999997 7999999999999999999999999998 899999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhh-HHHHHHHHHHHHHhccCCC-CCCCCCcccccCCHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGP-PLAGKYDMGALCLLEHSEKLQNLVN 315 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i-~d~f~~~L~~~~~~~~~g~-~~~~~~~~g~li~~~~~~~~~~~i~ 315 (522)
||++.|++.+++++|.|+||.|++++++|||+++ +|+|+++|+++++++++|+ |.++++++|||+++++++++.++++
T Consensus 261 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~ 340 (490)
T 3ju8_A 261 ADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQE 340 (490)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999996 9999999999999999999 9999999999999999999999999
Q ss_pred HHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecC
Q 009919 316 DALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 395 (522)
Q Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 395 (522)
+++++|+++++||... +..|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 341 ~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~ 415 (490)
T 3ju8_A 341 HLIGKGAQPLLAMTQP----IDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSD 415 (490)
T ss_dssp HHHHTTCEEEECCCCC----STTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred HHHHCCCEEEECCCcc----CCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcC
Confidence 9999999999999743 2578999999998 9999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 396 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 396 d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|.++++++++++++|+|+||++.... .+.+||||+|.||++ ++++||+.|+|+...
T Consensus 416 d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 416 SRERFEQFLVESRAGIVNWNKQLTGA-ASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp CHHHHHHHHHHCCSSEEEESSCSSCC-CTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred CHHHHHHHHHhcCcceEEECCCcCCC-CCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 99999999999999999999976533 456999999999985 489999999998653
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=4.8e-90 Score=778.57 Aligned_cols=445 Identities=22% Similarity=0.370 Sum_probs=416.1
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCE 80 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~ 80 (522)
|+++++++.++.+++++++++|++|+..|+.+|.++|.++|++++++|++++++|++++++|+||+..++. .|+..+++
T Consensus 556 ~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid 634 (1026)
T 4f9i_A 556 SEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAID 634 (1026)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHH
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999985 69999999
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.++|++..++++..+..... ..+..+++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..
T Consensus 635 ~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~ 711 (1026)
T 4f9i_A 635 FLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWH 711 (1026)
T ss_dssp HHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHH
Confidence 99999998887765443221 134567899999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHh------cCCCceeeeCCCcce
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTPVTLELGGKDA 231 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa------~~~~pv~lelgGk~p 231 (522)
+++++. ++|+|+|+||+|+|++ +.+++|++ .+|.|+||||+.+|+.|++.++ ++++|+++|+|||||
T Consensus 712 l~ell~----eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp 787 (1026)
T 4f9i_A 712 LVELFR----EAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNA 787 (1026)
T ss_dssp HHHHHH----HTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEE
T ss_pred HHHHHH----HhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCe
Confidence 888765 7899999999999975 67899987 8999999999999999999998 578999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHH
Q 009919 232 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQ 311 (522)
Q Consensus 232 ~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~ 311 (522)
+||++|||++.|++.+++|+|.|+||.|+|+++||||++++|+|+++|+++++++++|+|.++++++||+|++.+++++.
T Consensus 788 ~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~ 867 (1026)
T 4f9i_A 788 IIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIK 867 (1026)
T ss_dssp EEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeE
Q 009919 312 NLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 391 (522)
Q Consensus 312 ~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~ 391 (522)
++|++++++| ++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 868 ~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~ 942 (1026)
T 4f9i_A 868 EYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGG 942 (1026)
T ss_dssp HHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEE
T ss_pred HHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 9999999998 999999732 12499999999999999999999999999999999999999999999999999999
Q ss_pred EecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCC-cchHHHHHhchhceEEEEcc
Q 009919 392 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 392 v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~~l~~ft~~k~v~~~~ 458 (522)
|||+|.+.++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+|++++++||+.|+|..+.
T Consensus 943 V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 943 IFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp EECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred EECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 99999999999999999999999998776666679999999999995 57999999999999998764
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=3.5e-90 Score=742.21 Aligned_cols=449 Identities=17% Similarity=0.234 Sum_probs=399.5
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHH-HHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a-~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++++++.++ +++++++++|++| |+.|+.++.++|.++|++++++|++++++|++++++|+||+..++. .|+..++
T Consensus 32 g~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 109 (534)
T 2y53_A 32 GVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGI 109 (534)
T ss_dssp CCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 68999999987 8999999999999 5999999999999999999999999999999999999999999986 5999999
Q ss_pred HHHHHHHHcccccc------CcccccCCcccccccceEEEeec-eEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCC
Q 009919 80 EKITWLLSEGEKWL------KPEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSE 152 (522)
Q Consensus 80 ~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~P~-GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 152 (522)
+.+++++..++++. .++..+... ......++.++|+ |||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 110 ~~~~~~a~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~ 188 (534)
T 2y53_A 110 FTLSYYAKLGASLGEVHALRDGSAESLSK-DRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPAT 188 (534)
T ss_dssp HHHHHHHHHHHTTCSCSEEEEEEEEECST-TSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHHHHhccccccccCCccccCCC-CCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999887654432 111111110 0111357889997 999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhcC-CCCCcEeeecCcch-hhhhHhcCccEEEEeCCHHHHHHHHHHHh--cCCCceeeeCCC
Q 009919 153 NASWSGCFYFRIIQAALAAVG-APENLVDVITGFAE-TGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGG 228 (522)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~~ag-~p~g~v~vv~g~~~-~~~~L~~~vd~V~ftGS~~~g~~v~~~aa--~~~~pv~lelgG 228 (522)
.+|+++..+++++. ++| +|+|+||+|+|+++ .++.| ..+|+|+||||+.+|+.|++.++ +++||+++||||
T Consensus 189 ~tp~~~~~l~~l~~----~aG~lP~gvv~vv~g~~~~l~~~l-~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGG 263 (534)
T 2y53_A 189 ATAWLTQRMVADVV----DAGILPPGALSIICGSSAGLLDQI-RSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADS 263 (534)
T ss_dssp GGHHHHHHHHHHHH----HHTCSCTTSEEECCSCCTTSGGGC-CTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCC
T ss_pred cchHHHHHHHHHHH----HhCCCCCCeEEEEeCChHHHHhcc-cccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCC
Confidence 99999998888765 689 79999999999653 34433 27899999999999999998875 899999999999
Q ss_pred cceEEEcCCC-----CHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCC
Q 009919 229 KDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303 (522)
Q Consensus 229 k~p~iV~~da-----Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~ 303 (522)
|||+||++|| ||+.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||++
T Consensus 264 k~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~ 343 (534)
T 2y53_A 264 LNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVS 343 (534)
T ss_dssp CEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSC
T ss_pred CCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCC
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCcEeeccCCCCC--CCCCCCcccccEEEecCCCC--CcccccccccceeeeeecC---CH--
Q 009919 304 LEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHT--MKLMQEEAFGPIMPIMKFN---TD-- 374 (522)
Q Consensus 304 ~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~--~~~~~~~~~~Ptvl~~~~~~--~~i~~~E~fgPvl~v~~~~---~~-- 374 (522)
+.+++++.++|+++ .+|+++++||..... .....|+|++|||+.+++++ |.+++||+||||++|++|+ |+
T Consensus 344 ~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~ 422 (534)
T 2y53_A 344 REQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNA 422 (534)
T ss_dssp HHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---
T ss_pred HHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCccc
Confidence 99999999999999 689999999973210 01135899999999999877 6899999999999999999 99
Q ss_pred ---HHHHHHHhcCCCCceeEEecCcHHHHHHHHHHh--ccCCeeecCCccc-------CCCCCCCccCCCCCCCCCc-ch
Q 009919 375 ---EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASN-------YMCQSLPFGGVKDSGFGRF-AG 441 (522)
Q Consensus 375 ---~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l--~~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~-~g 441 (522)
||||+++|+++|||++||||+|.++++++++++ ++|+|+||++... ...+.+||||+|.||+|++ +|
T Consensus 423 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g 502 (534)
T 2y53_A 423 LPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGG 502 (534)
T ss_dssp CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESG
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcch
Confidence 999999999999999999999999999999999 8999999986431 2345799999999999999 69
Q ss_pred HHHHHhchhceEEEEcc
Q 009919 442 VEGLRACCLVKSVVEDR 458 (522)
Q Consensus 442 ~~~l~~ft~~k~v~~~~ 458 (522)
.+|+++|++.|+|...+
T Consensus 503 ~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 503 LRALAFYHRRSAIQAAS 519 (534)
T ss_dssp GGGGGGGEEEEEEEEEH
T ss_pred HHHHHHHhhhheeecCH
Confidence 99999999999998765
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.8e-88 Score=727.96 Aligned_cols=438 Identities=19% Similarity=0.225 Sum_probs=398.0
Q ss_pred CceeE-EecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i~-~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
||+++ +++.++.+++++++++|++|+..|++++.++|.++|++++++|++++++|++++++|+||+..++. .|+..++
T Consensus 50 g~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 128 (528)
T 3v4c_A 50 AHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTT 128 (528)
T ss_dssp SSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 67888 999999999999999999999999999999999999999999999999999999999999999885 6999999
Q ss_pred HHHHHHHHcccc--ccCcccc---cCCcccccccceEEEeeceEEEEEccCchhhhhhh--HHHHHHhhcCCEEEEecCC
Q 009919 80 EKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVSE 152 (522)
Q Consensus 80 ~~l~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~--~~~~~ALaaGN~VvlKps~ 152 (522)
+.++++++.+++ |..+... +......+...+++++|+|||++|+|||||+.+.+ +++++||++||+||+|||+
T Consensus 129 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~ 208 (528)
T 3v4c_A 129 GQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHS 208 (528)
T ss_dssp HHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCT
T ss_pred HHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCC
Confidence 999999988776 4432211 11000123456889999999999999999999865 8999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCC--CceeeeCC
Q 009919 153 NASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL--TPVTLELG 227 (522)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~--~pv~lelg 227 (522)
.+|.++..+++++.++|.++|+|+|+||+|+|++ +.+++|++ .+|+|+||||+.+|+.|++.+++++ +|+++|||
T Consensus 209 ~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElG 288 (528)
T 3v4c_A 209 AHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELG 288 (528)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECC
T ss_pred CCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecC
Confidence 9999999999999999999999999999999965 78899987 8999999999999999999999999 99999999
Q ss_pred CcceEEEcCCC---CHHHHHHHHHHHHHHcCCCCcccCCeeEEchh-hHHHHHHHHHHHHHhccCCCCCCCCCcccccCC
Q 009919 228 GKDAFIVCDDV---DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCL 303 (522)
Q Consensus 228 Gk~p~iV~~da---Dl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~ 303 (522)
||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|++++++++. ++.+||+++
T Consensus 289 Gk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~------~~~~gp~~~ 362 (528)
T 3v4c_A 289 SVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAP------QTMLTDGIA 362 (528)
T ss_dssp CCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCC------EECSCHHHH
T ss_pred CCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhccc------CCCCCHHHH
Confidence 99999999999 88999999999999999999999999999997 999999999999999864 357899998
Q ss_pred HHHHHHHHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCC---CcccccccccceeeeeecCCHHHHHHH
Q 009919 304 LEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIMPIMKFNTDEEVVKL 380 (522)
Q Consensus 304 ~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~---~~i~~~E~fgPvl~v~~~~~~~eai~~ 380 (522)
.++.+++.++++ ++|+++++||. ..|+|++|||+.+++++ |++++||+||||++|++|+|+||||++
T Consensus 363 ~~~~~~v~~~~~---~~Ga~v~~gG~-------~~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~ 432 (528)
T 3v4c_A 363 KAYRDGQARFAT---RNAVKPLLATE-------SSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEEL 432 (528)
T ss_dssp HHHHHHHHHHHT---CTTCEEEECCC-------CCTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHH---hCCCEEEeCCC-------cCCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHH
Confidence 888887777764 37999999997 26899999999988887 899999999999999999999999999
Q ss_pred HhcCCCCceeEEecC--cHHHHHHHHHHhc--cCCeeecCCcccC-CCCCCCccC-CCCCCCCCcc--hHHHHHhchhce
Q 009919 381 ANDSRYGLGCAVFSG--SQHRAREIAAQIQ--CGVAAINDFASNY-MCQSLPFGG-VKDSGFGRFA--GVEGLRACCLVK 452 (522)
Q Consensus 381 ~n~~~~gL~a~v~s~--d~~~~~~~~~~l~--~G~v~IN~~~~~~-~~~~~PfGG-~~~SG~G~~~--g~~~l~~ft~~k 452 (522)
+|+++|||++||||+ |.+++++++++++ +|+|+||++.+.. ..+.+|||| +|.||+|++| |++|+++||+.|
T Consensus 433 aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k 512 (528)
T 3v4c_A 433 ARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPV 512 (528)
T ss_dssp HHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEE
T ss_pred HhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhH
Confidence 999999999999999 8899999999998 9999999976532 346799999 9999999987 999999999999
Q ss_pred EEE
Q 009919 453 SVV 455 (522)
Q Consensus 453 ~v~ 455 (522)
++.
T Consensus 513 ~~q 515 (528)
T 3v4c_A 513 AYQ 515 (528)
T ss_dssp EEE
T ss_pred Hhh
Confidence 864
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=8.1e-88 Score=720.02 Aligned_cols=436 Identities=17% Similarity=0.219 Sum_probs=394.3
Q ss_pred Ccee-EEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHH
Q 009919 1 MKYL-GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTC 79 (522)
Q Consensus 1 g~~i-~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~ 79 (522)
|+++ ++++.++.+++++++++|++|++.|++++.++|.++|++++++|++++++|++++++|+||+..++ ..|+..++
T Consensus 17 g~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~ 95 (510)
T 1ez0_A 17 GEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRL-TGEIARTA 95 (510)
T ss_dssp SSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHH
Confidence 6889 799999999999999999999999999999999999999999999999999999999999999887 47999999
Q ss_pred HHHHHHHHcccc--ccCccccc-CCcc-ccc-ccceEEEeeceEEEEEccCchhhhhh--hHHHHHHhhcCCEEEEecCC
Q 009919 80 EKITWLLSEGEK--WLKPEYRS-SGRS-MIH-KKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLAAVFSGNGIVIKVSE 152 (522)
Q Consensus 80 ~~l~~~~~~~~~--~~~~~~~~-~~~~-~~~-~~~~~~~~P~GVv~vi~p~N~P~~~~--~~~~~~ALaaGN~VvlKps~ 152 (522)
+.++++++.+++ |+.+.... .+.. ..+ ...+++++|+|||++|+|||||+.+. .+++++||++||+||+|||+
T Consensus 96 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~ 175 (510)
T 1ez0_A 96 NQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHT 175 (510)
T ss_dssp HHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCT
T ss_pred HHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCC
Confidence 999999988875 55432100 0000 001 13578999999999999999999985 49999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCC--CceeeeCC
Q 009919 153 NASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL--TPVTLELG 227 (522)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~--~pv~lelg 227 (522)
.+|+++.++++++.++|.++|+|+|++|+|+|+ .+.+++|++ .+|+|+||||+.+|+.|++.+++++ ||+++|||
T Consensus 176 ~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lELG 255 (510)
T 1ez0_A 176 AHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELG 255 (510)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECC
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEECC
Confidence 999999999999999999999999999999995 467899987 7999999999999999999999986 99999999
Q ss_pred CcceEEEcCCCCHH--HHHHHHHHHHHHcCCCCcccCCeeEEchh-hHHHHHHHHHHHHHhccCCCCCCCCCcccccCCH
Q 009919 228 GKDAFIVCDDVDVP--HVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLL 304 (522)
Q Consensus 228 Gk~p~iV~~daDl~--~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~ 304 (522)
||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++ ||++++
T Consensus 256 Gk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~ 325 (510)
T 1ez0_A 256 AINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----------STLLTP 325 (510)
T ss_dssp CCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----------BCCSSH
T ss_pred CCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----------CCCCCH
Confidence 99999999999999 99999999999999999999999999998 999999999999999863 578889
Q ss_pred HHHHHHHHHHHHHHH-cCCcEeeccCCCCCCCCCCCcccccEEEecCCCC---CcccccccccceeeeeecCCHHHHHHH
Q 009919 305 EHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIMPIMKFNTDEEVVKL 380 (522)
Q Consensus 305 ~~~~~~~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~---~~i~~~E~fgPvl~v~~~~~~~eai~~ 380 (522)
.+.+++.++++++++ +|+++++||. +|+|++|||+.+++++ |++++||+||||++|++|+|+||||++
T Consensus 326 ~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~ 397 (510)
T 1ez0_A 326 GIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSL 397 (510)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHH
Confidence 999999999999984 7999999986 2899999999988777 999999999999999999999999999
Q ss_pred HhcCCCCceeEEecCcH--HHHHHHHHHh--ccCCeeecCCcccC-CCCCCCccC-CCCCCCCCc--chHHHHHhchhce
Q 009919 381 ANDSRYGLGCAVFSGSQ--HRAREIAAQI--QCGVAAINDFASNY-MCQSLPFGG-VKDSGFGRF--AGVEGLRACCLVK 452 (522)
Q Consensus 381 ~n~~~~gL~a~v~s~d~--~~~~~~~~~l--~~G~v~IN~~~~~~-~~~~~PfGG-~~~SG~G~~--~g~~~l~~ft~~k 452 (522)
+|+++|||++||||+|. ++++++++++ ++|+|+||++.... ..+.+|||| +|.||+|+. +|++||++|++.|
T Consensus 398 aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k 477 (510)
T 1ez0_A 398 SEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPV 477 (510)
T ss_dssp HHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEE
T ss_pred HhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEE
Confidence 99999999999999987 7899999999 79999999875432 234699999 799999854 8999999999888
Q ss_pred EEE
Q 009919 453 SVV 455 (522)
Q Consensus 453 ~v~ 455 (522)
++.
T Consensus 478 ~~~ 480 (510)
T 1ez0_A 478 AYQ 480 (510)
T ss_dssp EEE
T ss_pred EEc
Confidence 764
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=2.2e-87 Score=755.32 Aligned_cols=435 Identities=22% Similarity=0.347 Sum_probs=403.2
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHHHH
Q 009919 7 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL 86 (522)
Q Consensus 7 v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~ 86 (522)
++.++.+++++++++|++|+..|+.+|.++|.++|+++++.|+++.++|++++++|+||+..++. .|+..+++.++|++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999985 79999999999999
Q ss_pred HccccccCcc-cccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHH
Q 009919 87 SEGEKWLKPE-YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 165 (522)
Q Consensus 87 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~ 165 (522)
...+++.... ..+.+ .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++
T Consensus 623 ~~a~~~~g~~~~~~~~---~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell 699 (1001)
T 3haz_A 623 AQGRKLFGSETAMPGP---TGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALL 699 (1001)
T ss_dssp HHHHHHHSSCEECCCC---TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHhhcCccccccCC---CCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHH
Confidence 9887765432 12211 3467789999999999999999999999999999999999999999999999999888876
Q ss_pred HHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcC---CCceeeeCCCcceEEEcCCCCH
Q 009919 166 QAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGKDAFIVCDDVDV 240 (522)
Q Consensus 166 ~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~---~~pv~lelgGk~p~iV~~daDl 240 (522)
. ++|+|+|+||+|+|+++.++.|++ .||+|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||+
T Consensus 700 ~----eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADl 775 (1001)
T 3haz_A 700 H----EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALP 775 (1001)
T ss_dssp H----HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCH
T ss_pred H----HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCH
Confidence 5 679999999999998755999987 799999999999999999998864 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc
Q 009919 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK 320 (522)
Q Consensus 241 ~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~ 320 (522)
+.|++.+++|+|.|+||.|+|+++||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++.++
T Consensus 776 d~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~ 855 (1001)
T 3haz_A 776 EQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTE 855 (1001)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCC--HHHHHHHHhcCCCCceeEEecCcHH
Q 009919 321 GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQH 398 (522)
Q Consensus 321 Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~ 398 (522)
| ++ +||.. +..|+|++|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||++||||+|.+
T Consensus 856 g-~v-~gg~~-----~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~ 926 (1001)
T 3haz_A 856 A-RL-HFAGP-----APEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDD 926 (1001)
T ss_dssp S-EE-EEECC-----CCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHH
T ss_pred C-eE-ecccc-----CCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHH
Confidence 8 88 88873 24599999999974 6889999999999999999996 7999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCCC-cchHHHHHhchhceEEEEcc
Q 009919 399 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 399 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~g~~~l~~ft~~k~v~~~~ 458 (522)
.++++++++++|+|+||+...+...+.+||||+|.||+|+ .+|++|+++||+.|+|+.+.
T Consensus 927 ~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 927 SIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred HHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 9999999999999999998776656678999999999995 67899999999999998764
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=2.7e-81 Score=662.65 Aligned_cols=422 Identities=18% Similarity=0.197 Sum_probs=375.6
Q ss_pred EEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHHHH
Q 009919 5 GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITW 84 (522)
Q Consensus 5 ~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~ 84 (522)
.+++..+.+++++++++|++||+.|++++.++|.++|+++++.|.+++++|++++++|+||+..++...+....++.+..
T Consensus 4 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~ 83 (464)
T 3k9d_A 4 EDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYN 83 (464)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 45566788999999999999999999999999999999999999999999999999999999988865566555665554
Q ss_pred HHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHH
Q 009919 85 LLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRI 164 (522)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~ 164 (522)
+++..+.. .... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++
T Consensus 84 ~~~~~~~~---g~~~---~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~l 157 (464)
T 3k9d_A 84 YIKDMKTI---GMLK---EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRI 157 (464)
T ss_dssp HHTTCCCS---EEEE---EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH
T ss_pred hhhccccc---ceec---cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHH
Confidence 44332110 0111 01345678899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcEeeecCc-chhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCC-CcceEEEcCCCCH
Q 009919 165 IQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG-GKDAFIVCDDVDV 240 (522)
Q Consensus 165 ~~~~l~~ag~p~g~v~vv~g~-~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelg-Gk~p~iV~~daDl 240 (522)
+.+++.++|+|+|+|++|+|. .+.+++|++ ++|+|+||||+. +++.+++++||+ +|+| ||||+||++|||+
T Consensus 158 l~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl 232 (464)
T 3k9d_A 158 ISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANI 232 (464)
T ss_dssp HHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCH
T ss_pred HHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCH
Confidence 999999999999999999996 478899988 799999999998 467788899999 7888 9999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHH-------HhccCCCCC-CCCCcccccCCHHHHHHHHH
Q 009919 241 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KSVSAGPPL-AGKYDMGALCLLEHSEKLQN 312 (522)
Q Consensus 241 ~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~-------~~~~~g~~~-~~~~~~g~li~~~~~~~~~~ 312 (522)
+.|++.|++|+|.|+||.|+++++||||+++||+|+++|+++. +.+++|++. ++++++||+++.++++++.+
T Consensus 233 ~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~ 312 (464)
T 3k9d_A 233 PRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIAN 312 (464)
T ss_dssp HHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986 345677776 67889999999999999999
Q ss_pred HHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHH----HHHhcCCCCc
Q 009919 313 LVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV----KLANDSRYGL 388 (522)
Q Consensus 313 ~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gL 388 (522)
+++.++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||
T Consensus 313 ~~~~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl 373 (464)
T 3k9d_A 313 LAGLTVPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGH 373 (464)
T ss_dssp HTTCCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEE
T ss_pred HhhhhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCC
Confidence 999888889999999861 567788865 89999999999999999997 7999999999
Q ss_pred eeEEecCcHHHHHHHHHHhccCCeeecCCccc-------CCCCCCCccCCCCCCCCCcchHHHHHhchhceEEEEc
Q 009919 389 GCAVFSGSQHRAREIAAQIQCGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 457 (522)
Q Consensus 389 ~a~v~s~d~~~~~~~~~~l~~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~~~ 457 (522)
++||||+|.+.++++++++++|+|+||++..+ ...+.+|||| |.||.|.++|..|+++|++.|+|.+.
T Consensus 374 ~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 374 TLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred eEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99999999999999999999999999998653 2457899998 88999999999999999999999763
No 48
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.9e-81 Score=660.15 Aligned_cols=402 Identities=16% Similarity=0.180 Sum_probs=336.2
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-------CCChh----h
Q 009919 1 MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT-------GKTMV----D 69 (522)
Q Consensus 1 g~~i~~v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~-------Gk~~~----e 69 (522)
|+++++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+ ||+.. +
T Consensus 17 g~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~ 96 (463)
T 2h5g_A 17 NLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSL 96 (463)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhh
Confidence 688999999999999999999999999999999999999999999999999999999999999 69987 3
Q ss_pred hhhhHHHHHHHHHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEe
Q 009919 70 ASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK 149 (522)
Q Consensus 70 a~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlK 149 (522)
+. .|+..+++.++++++.++++.... .+......+...+++++|+|||++|+||| |+..+ +++++||++||+||+|
T Consensus 97 a~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlK 172 (463)
T 2h5g_A 97 ST-SKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLK 172 (463)
T ss_dssp CH-HHHHHHHHHHHHHHHHCTTSTTCE-EEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEE
T ss_pred hH-HHHHHHHHHHHHHHHhhHhhcCcc-cccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEE
Confidence 53 799999999999998888876543 11111012345689999999999999777 77766 7999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCC
Q 009919 150 VSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 227 (522)
Q Consensus 150 ps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelg 227 (522)
||+.+|.++..+++++.++|.++| |+|+|++|+|+.+.++.|+. .+|+|+||||+.+|+.|++.++ +||+++|||
T Consensus 173 ps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElG 249 (463)
T 2h5g_A 173 GGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSE 249 (463)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSC
T ss_pred CCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecC
Confidence 999999999999999999988889 99999999996577888987 7999999999999999999888 999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHH
Q 009919 228 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 307 (522)
Q Consensus 228 Gk~p~iV~~daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~ 307 (522)
||||+||++|||++.|++.+++++|.| ||.|++++|||||++++| ||+ +
T Consensus 250 Gk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~-----~ 298 (463)
T 2h5g_A 250 GICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL-----F 298 (463)
T ss_dssp CCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-----H
T ss_pred CcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-----H
Confidence 999999999999999999999999999 999999999999999998 232 2
Q ss_pred HHHHHHHHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCC
Q 009919 308 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 387 (522)
Q Consensus 308 ~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 387 (522)
+ +++++++++|++++.|+.. ...++|+ +++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 299 ~---~~i~~~~~~Ga~v~~G~~~-----~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~g 362 (463)
T 2h5g_A 299 D---QIIDMLRVEQVKIHAGPKF-----ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSS 362 (463)
T ss_dssp H---HHHHHHHHTTCEEEECHHH-----HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCS
T ss_pred H---HHHHHHHhCCCEEEeCCcc-----cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCC
Confidence 3 3577778899999855431 1123332 5789999999999999999999999999999999999
Q ss_pred ceeEEecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC--Cc--chHHHHHhchhceEEEEcc
Q 009919 388 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RF--AGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 388 L~a~v~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~--~g~~~l~~ft~~k~v~~~~ 458 (522)
|++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+| ++ +|++||++||+.|+|+...
T Consensus 363 Laa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 363 HTDVIVTEDENTAEFFLQHVDSACVFWNASTRF--SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp SEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG--CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred ceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC--CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 999999999999999999999999999997653 356999999999999 76 9999999999999998764
No 49
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=1.4e-80 Score=655.87 Aligned_cols=400 Identities=15% Similarity=0.137 Sum_probs=325.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhhhHHHH-HHHHHHHHHHc
Q 009919 14 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASLGEIMT-TCEKITWLLSE 88 (522)
Q Consensus 14 ~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~~Ei~~-~~~~l~~~~~~ 88 (522)
.+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+||+. .++...|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999998 7875578888 88899999888
Q ss_pred cccccCcccccCCc---c--cccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHH
Q 009919 89 GEKWLKPEYRSSGR---S--MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 163 (522)
Q Consensus 89 ~~~~~~~~~~~~~~---~--~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~ 163 (522)
++++..+....... . ..+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 87776432210010 0 01345689999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHHHHHHh----cCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 164 IIQAALAA----VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 164 ~~~~~l~~----ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
++.++|.+ +|+|+|++|+|+ +. +.++.|+. .+|+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 99989999 999999999999 65 67888887 799999999999999999877 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccC---CCCCCCCCcccccCCHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~---g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|+++++++++ |+|.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcc
Confidence 99999999999999999999 99999999999999 9999999999999986 66421 344
Q ss_pred -HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEE
Q 009919 314 -VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 392 (522)
Q Consensus 314 -i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v 392 (522)
++++. ++++||. | ++||++ ++++|.+++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 310 ~i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 372 (468)
T 1vlu_A 310 YFDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAI 372 (468)
T ss_dssp HHHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEE
T ss_pred cccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEE
Confidence 66654 4666664 3 689887 7889999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCcc-----CCCCCCCCCcchHHHHHhchhceEEEEcc
Q 009919 393 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFG-----GVKDSGFGRFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 393 ~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfG-----G~~~SG~G~~~g~~~l~~ft~~k~v~~~~ 458 (522)
||+|.+.++++++++++|+|+||++... .+.+||| |+|.||+|++ |++|+++||+.|+|+...
T Consensus 373 ~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 373 VTENKANAEKFMKGVDSSGVYWNASTRF--ADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp ECSCHHHHHHHHHHCCCSEEEESSCGGG--CC-----------------------CCSGGGEEEEEEEECS
T ss_pred EeCCHHHHHHHHHhCCeeEEEEcCCCCC--CCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999999999999999997653 3468999 9999999999 999999999999998754
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=2.6e-77 Score=628.39 Aligned_cols=393 Identities=19% Similarity=0.218 Sum_probs=330.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------hHHHHHHH
Q 009919 12 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCE 80 (522)
Q Consensus 12 ~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~-------~Ei~~~~~ 80 (522)
.+++++++++|++|++.|+.+|.++|.++|+++++.|.++.++|++++++|+||+. .++.. .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999985 35543 37888888
Q ss_pred HHHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHH
Q 009919 81 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 160 (522)
Q Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~ 160 (522)
.+++++...+.. . ...+......+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++..
T Consensus 105 ~l~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI-G-EMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT-T-CEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc-C-ccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 899888765431 1 1111100112356789999999999999998 8 5889999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEeeecCc-ch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcC
Q 009919 161 YFRIIQAALAAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 236 (522)
Q Consensus 161 l~~~~~~~l~~ag~p~g~v~vv~g~-~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~ 236 (522)
+++++.++|.++|+|+|++++|+|+ .+ .++.|.. .+|+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 9999999999999999999999984 33 5677765 799999999999999999876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccC---CCCCCCCCcccccCCHHHHHHHHHH
Q 009919 237 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 313 (522)
Q Consensus 237 daDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~---g~~~~~~~~~g~li~~~~~~~~~~~ 313 (522)
|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|+++++++++ |+|. ..++
T Consensus 258 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHH
Confidence 99999999999999999999 9999999999999999999999999999887 5431 1345
Q ss_pred HHHHHHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEe
Q 009919 314 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 393 (522)
Q Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~ 393 (522)
++++. .| ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 320 i~~a~-------------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 372 (444)
T 4ghk_A 320 LEAAG-------------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIV 372 (444)
T ss_dssp HHHTT-------------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEE
T ss_pred HHhcc-------------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 55431 01 11 34678999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC----CcchHHHHHhchhceEEEEcc
Q 009919 394 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 394 s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G----~~~g~~~l~~ft~~k~v~~~~ 458 (522)
|+|.++++++++++++|+|+||++... .+.+||||.+.||+| +++|++||++||+.|+|+...
T Consensus 373 t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 373 TEDHDRAMRFLREVDSASVMVNASTRF--ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp CSBHHHHHHHHHHCCSSEEEEEECGGG--CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred eCCHHHHHHHHHhCCcceEEEcCCCcc--CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 999999999999999999999997654 346899999999998 689999999999999998754
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.3e-77 Score=627.67 Aligned_cols=390 Identities=19% Similarity=0.204 Sum_probs=339.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCh----hhhhh-------hHHHHHHHH
Q 009919 13 AEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCEK 81 (522)
Q Consensus 13 ~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~-------~Ei~~~~~~ 81 (522)
+++++++++|++||..|+++|.++|.++|+++++.|++++++|++++++|+||+. .++.. .|+..+++.
T Consensus 14 ~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~ 93 (427)
T 1o20_A 14 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 93 (427)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999885 55532 589999999
Q ss_pred HHHHHHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHH
Q 009919 82 ITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFY 161 (522)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l 161 (522)
++++++..+. .. ...+......+...+++++|+|||++|+||| +.+.++++++||++||+||+|||+.+|.++..+
T Consensus 94 l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 94 CETVIGLKDP-VG-EVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHhcccc-cC-ccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 9999876553 11 1111000011234688999999999999986 468999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcEeeecC-cch-hhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCC
Q 009919 162 FRIIQAALAAVGAPENLVDVITG-FAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDD 237 (522)
Q Consensus 162 ~~~~~~~l~~ag~p~g~v~vv~g-~~~-~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~d 237 (522)
++++.++|.++|+|+|++|+|+| +.+ .++.|.. ++|+|+||||+.+|+.|++.+ +||+++|||||||+||++|
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~d 246 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDES 246 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCC
Confidence 99999999999999999999998 444 5677775 799999999999999999887 5999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 009919 238 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDA 317 (522)
Q Consensus 238 aDl~~aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a 317 (522)
||++.|++.+++++|.|+| .|++++|||||++++|+|+++|++++++++++
T Consensus 247 ADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 297 (427)
T 1o20_A 247 ADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE---------------------------- 297 (427)
T ss_dssp SCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE----------------------------
T ss_pred CCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999987642
Q ss_pred HHcCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcH
Q 009919 318 LDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 397 (522)
Q Consensus 318 ~~~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 397 (522)
+.||.+ ..+ |+ ||| ++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 298 -------~~gg~~------~~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 359 (427)
T 1o20_A 298 -------VRGCEK------TRE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENY 359 (427)
T ss_dssp -------EEECHH------HHH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCH
T ss_pred -------eecChh------hhh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCH
Confidence 123321 012 33 885 245789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeeecCCcccCCCCCCCccCCCCCCCC----CcchHHHHHhchhceEEEEcc
Q 009919 398 HRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 458 (522)
Q Consensus 398 ~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G----~~~g~~~l~~ft~~k~v~~~~ 458 (522)
++++++++++++|+|+||++... .+.+||||.|.||+| +++|++|+++||+.|+|+...
T Consensus 360 ~~a~~~~~~l~~G~V~iN~~~~~--~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 360 SNAKKFVSEIDAAAVYVNASTRF--TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHCCSSEEEESSCGGG--CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHhCCccEEEECCCCcc--CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999999999987553 346899999999997 467999999999999998754
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.3e-75 Score=615.46 Aligned_cols=382 Identities=17% Similarity=0.199 Sum_probs=330.7
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCChhhhhhhHHHHHHHHH-HHH
Q 009919 7 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKI-TWL 85 (522)
Q Consensus 7 v~~~~~~~v~~~v~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l-~~~ 85 (522)
++.++.+++++++++|++||+.|+++|.++|.++|+++++.|.+++++|++++++|+||+..++...|+..+.+.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999999999999999999999999999998755776666666 333
Q ss_pred HHccccccCcccccCCcccccccceEEEeeceEEEEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHH
Q 009919 86 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 165 (522)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~ 165 (522)
... +.. ...+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++
T Consensus 81 ~~~--~~~--g~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 81 KDE--QTC--GILEE---DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp TTC--CCS--EEC----------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred hhc--ccc--ccccC---CCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 221 110 01111 12345688999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEeeecCcc-hhhhhHhc--CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHH
Q 009919 166 QAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 242 (522)
Q Consensus 166 ~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~--~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~ 242 (522)
.+++.++|+|+|++++|+|.+ +.+++|++ ++|.|+||||+.+ ++++++++||+++|+|||||+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 999999999999999999954 78999987 8999999999985 4567788999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCcccCCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC
Q 009919 243 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 322 (522)
Q Consensus 243 aa~~i~~~~~~n~Gq~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga 322 (522)
|++.|++|+|+|+||.|+++++||||+++||+|+++|+++ +||++++++++++.++++++...|+
T Consensus 230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999999999999999999999874 3899999999999999987655677
Q ss_pred cEeeccCCCCCCCCCCCcccccEE-------EecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCC----CCceeE
Q 009919 323 EILARGSFGHLSEGAVDQYFPPTV-------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR----YGLGCA 391 (522)
Q Consensus 323 ~v~~gG~~~~~~~~~~~~~~~Ptv-------l~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gL~a~ 391 (522)
++ .||..... ....|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||++|
T Consensus 295 ~v-~G~~~~~~-~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~ 371 (452)
T 3my7_A 295 KI-VGQPATAI-AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSG 371 (452)
T ss_dssp GG-TTCCHHHH-HHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEE
T ss_pred eE-ecCccchh-HHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEE
Confidence 76 46642100 012589999997 667889999876 89999999999999999999999985 999999
Q ss_pred EecCcHHHHHH---HHHHhccCCeeecCC
Q 009919 392 VFSGSQHRARE---IAAQIQCGVAAINDF 417 (522)
Q Consensus 392 v~s~d~~~~~~---~~~~l~~G~v~IN~~ 417 (522)
|||+|.+.+++ +++++++|+|+||++
T Consensus 372 i~t~d~~~a~~i~~~a~~l~~G~V~VN~~ 400 (452)
T 3my7_A 372 LYTNQDVNADRIRYFGDKMKTARILINIP 400 (452)
T ss_dssp EESCTTTCHHHHHHHHHHCCCSEEEESCC
T ss_pred EEcCCHHHHHHHHHHHHhCCEEEEEECCC
Confidence 99999877666 999999999999985
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.06 E-value=0.31 Score=49.08 Aligned_cols=258 Identities=17% Similarity=0.195 Sum_probs=143.7
Q ss_pred cccceEEEeeceEEEEEccCc---hhhhhhhHHHHHHhhcCCE--EEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEe
Q 009919 106 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNG--IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 180 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~N---~P~~~~~~~~~~ALaaGN~--VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~ 180 (522)
|.....++.|+--|++..|.- ||- +.+...+||-.||.. |+.-|.+........++ +.+.+|..+ ++.
T Consensus 120 G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~-----AA~l~Gv~e-Iy~ 192 (423)
T 4gic_A 120 GTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALVLA-----AAYISGVDR-VFR 192 (423)
T ss_dssp SCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH-----HHHHHTCCE-EEC
T ss_pred CCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHHHH-----HHHhcCCcE-EEE
Confidence 455667889999999999954 553 466778999999986 33344432111111111 223467755 222
Q ss_pred eecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCceeeeCCCcceEEE--cCCCCHHHHHHHHHHHHH
Q 009919 181 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV--CDDVDVPHVAQIAVRAAL 252 (522)
Q Consensus 181 vv~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~pv~lelgGk~p~iV--~~daDl~~aa~~i~~~~~ 252 (522)
+ |+.+...+|.- ++|+|+=.|..=+..+ +.......-+=+. .|.+=+.| |+++|.+..|..++..+=
T Consensus 193 -v-GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~g~VgIDm~-AGPSEilViAD~~a~p~~vAaDLlsQAE 267 (423)
T 4gic_A 193 -I-GGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVFGQVGIDMV-AGPSEILVISDGRTDPDWIAMDLFSQAE 267 (423)
T ss_dssp -C-CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHBTTBEECCC-CCCCEEEEEECSCSCHHHHHHHHHHHHT
T ss_pred -c-CChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhcCCcCcccc-cccceEEEEeCCCCCHHHHHHHHHHhhc
Confidence 2 55565555532 8999998887755332 1111111111122 34443333 445999998888876655
Q ss_pred HcCCCCcccCCeeEEch--hhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCC
Q 009919 253 QSSGQNCAGAERFYVHR--DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 330 (522)
Q Consensus 253 ~n~Gq~C~a~~~v~V~~--~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~ 330 (522)
+.. .+ +.++|.. +..++..+.+.+.++.+. . .+.+.+.++. .|
T Consensus 268 Hd~----~a-~~iLvT~s~~la~~V~~~i~~~l~~l~---------------r---~~i~~~sl~~---~g--------- 312 (423)
T 4gic_A 268 HDE----DA-QAILISPDAAHLEAVQASIERLLPGME---------------R---AEVIRTSLER---RG--------- 312 (423)
T ss_dssp TCT----TC-EEEEEESCHHHHHHHHHHHHHHGGGCT---------------T---HHHHHHHHHH---HC---------
T ss_pred cCC----CC-eEEEEeCcHHHHHHHHHHHHHHHhhCc---------------c---HHHHHHHHhc---Cc---------
Confidence 433 23 3344433 455555555555555442 1 1112222211 11
Q ss_pred CCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc-c
Q 009919 331 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 409 (522)
Q Consensus 331 ~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~-~ 409 (522)
.++.++|++||++++|..- +=-.-|.++|.. .++.+++ +
T Consensus 313 ------------------------------------~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~~l~~i~nA 352 (423)
T 4gic_A 313 ------------------------------------GMILVDDLEQAAAVANRIA-PEHLELSVESPE---VLVESIRNA 352 (423)
T ss_dssp ------------------------------------EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---HHGGGCCCC
T ss_pred ------------------------------------eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---HHHhhCcEe
Confidence 3455789999999999842 235678888864 4667775 9
Q ss_pred CCeeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 410 GVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 410 G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.|++..+.. ...++-+|- +|..|+.+.-+.+.|...-++.
T Consensus 353 GaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 353 GAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp SEEEEC----------------CCCC-----TTGGGTCCCCCGGGGEEEEEEE
T ss_pred ceeecCCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeEE
Confidence 9999987521 112345665 4566666666778888665553
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=96.61 E-value=0.39 Score=48.50 Aligned_cols=257 Identities=16% Similarity=0.144 Sum_probs=147.7
Q ss_pred cccceEEEeeceEEEEEccC---chhhhhhhHHHHHHhhcCCEEEE--ecCCCchHHHHHHHHHHHHHHHhcCCCCCcEe
Q 009919 106 HKKAKVEFHPLGVVGAIVSW---NYPFHNIFNPMLAAVFSGNGIVI--KVSENASWSGCFYFRIIQAALAAVGAPENLVD 180 (522)
Q Consensus 106 ~~~~~~~~~P~GVv~vi~p~---N~P~~~~~~~~~~ALaaGN~Vvl--Kps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~ 180 (522)
|.....++.|+--|++..|. -||- +.+...+||-.+|..=|+ -|....|.+ ++ +.+.+|..+ ++.
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i~p~i---L~-----AA~l~Gv~e-Iy~ 183 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI---LY-----AAQLCGVQD-VFN 183 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH---HH-----HHHHTTCCE-EEE
T ss_pred CcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCCCHHH---HH-----HHHHcCCCE-Eee
Confidence 44556778899999999996 3553 466778999999985444 444233332 11 123467755 222
Q ss_pred eecCcchhhhhHhc------CccEEEEeCCHHHHHHHHHHHhcCCCceeee-CCCcceEEE--cCCCCHHHHHHHHHHHH
Q 009919 181 VITGFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLE-LGGKDAFIV--CDDVDVPHVAQIAVRAA 251 (522)
Q Consensus 181 vv~g~~~~~~~L~~------~vd~V~ftGS~~~g~~v~~~aa~~~~pv~le-lgGk~p~iV--~~daDl~~aa~~i~~~~ 251 (522)
+ |+.+...+|.- ++|+|+=.|..=+..+=..-..... .|-.. ..|.+=+.| |++||.+..|..++..+
T Consensus 184 -v-GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G-~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQA 260 (434)
T 1kae_A 184 -V-GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQA 260 (434)
T ss_dssp -C-CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred -c-ccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcC-ccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 2 55565555532 8999987777654321111100011 12111 134443333 45699999888887665
Q ss_pred HHcCCCCcccCCeeEEc-hhhHHHHHHHHHHHHHhccCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCcEeeccCC
Q 009919 252 LQSSGQNCAGAERFYVH-RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 330 (522)
Q Consensus 252 ~~n~Gq~C~a~~~v~V~-~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g~li~~~~~~~~~~~i~~a~~~Ga~v~~gG~~ 330 (522)
=+.. .+...++.+ ++..++..+.+.+.+..+. . . +.++.+.
T Consensus 261 EHd~----~a~aiLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~ia~~sl------------ 302 (434)
T 1kae_A 261 EHGP----DSQVILLTPAADMARRVAEAVERQLAELP---------------R---A----ETARQAL------------ 302 (434)
T ss_dssp TTCT----TCEEEEEESCHHHHHHHHHHHHHHHTTCT---------------T---H----HHHHHHH------------
T ss_pred ccCC----CCcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHH------------
Confidence 4433 333333333 3445555555555444431 0 1 1112111
Q ss_pred CCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHHHhcCCCCceeEEecCcHHHHHHHHHHhc-c
Q 009919 331 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 409 (522)
Q Consensus 331 ~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~~~~l~-~ 409 (522)
..- .|+-++|++||++++|..- +=-.-|.++|.. .++.+++ +
T Consensus 303 --------------------------------~~~-~ii~v~~l~ea~~~~N~~A-PEHLel~~~dp~---~~l~~I~nA 345 (434)
T 1kae_A 303 --------------------------------NAS-RLIVTKDLAQCVEISNQYG-PEHLIIQTRNAR---ELVDSITSA 345 (434)
T ss_dssp --------------------------------TTC-EEEECSSHHHHHHHHHHHC-CSEEEEESTTHH---HHGGGCCSC
T ss_pred --------------------------------HcC-eEEEECCHHHHHHHHHHhh-hHhhhhhhcCHH---HHHhhcCcc
Confidence 111 4556789999999999852 235778888874 4666775 8
Q ss_pred CCeeecCCcc-------cCCCCCCCccCCCCCCCCCcchHHHHHhchhceEEE
Q 009919 410 GVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 455 (522)
Q Consensus 410 G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~g~~~l~~ft~~k~v~ 455 (522)
|.|++..+.. ...++-||-+ |..|+.+.-+.+.|...-++.
T Consensus 346 GaIFlG~~tpe~~GDY~aG~NHvLPT~-----G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 346 GSVFLGDWSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp SEEEESTTCCHHHHHHTSSSCCCCCCT-----TGGGTCCCSCGGGGEEEEEEE
T ss_pred cchhcCCCCchhhcccccCCCcccCCC-----CceeccCCCcHHhccceeeEE
Confidence 9999997521 2335667765 556666666778888766554
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=74.36 E-value=7.4 Score=30.83 Aligned_cols=61 Identities=20% Similarity=0.235 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHHHHHHHH-cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHHH
Q 009919 302 CLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 380 (522)
Q Consensus 302 i~~~~~~~~~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 380 (522)
.+++.+++..+....+++ .|++++..|.. |.++.+. + .+-+.|+.|+|.++|.++
T Consensus 15 ~d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~-------------~~~~eG~-~----------~~~~viieFpS~~aa~~~ 70 (99)
T 2fiu_A 15 RDSERYKDYVSTAKPAFERFGANFLARGGS-------------VTELEGT-A----------RARNVVIEFPSVQHAIDC 70 (99)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEESCC-------------EEEEESC-C----------CSEEEEEEESSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCcEEEEECCC-------------ceEEecC-C----------cCeEEEEECCCHHHHHHH
Confidence 355556555555555443 58888877661 5555431 1 237789999999999999
Q ss_pred HhcCCC
Q 009919 381 ANDSRY 386 (522)
Q Consensus 381 ~n~~~~ 386 (522)
.|+.+|
T Consensus 71 ~~s~~Y 76 (99)
T 2fiu_A 71 YNSPEY 76 (99)
T ss_dssp HHSHHH
T ss_pred HcCHHH
Confidence 997643
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=62.41 E-value=10 Score=32.55 Aligned_cols=113 Identities=12% Similarity=0.091 Sum_probs=75.8
Q ss_pred eEEEEEccCc-hhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEeeecC--cchhhhhHh
Q 009919 117 GVVGAIVSWN-YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG--FAETGEALV 193 (522)
Q Consensus 117 GVv~vi~p~N-~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g--~~~~~~~L~ 193 (522)
|.|+++..-+ =+-...+..-...+.+|..++-- .-|+..+.+ ..|++-..++=++. +.+.++.+.
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa~~L~e-------~~Gl~v~~v~k~~eGG~p~I~d~I~ 79 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTGNLISR-------ATGMNVNAMLSGPMGGDQQVGALIS 79 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHHHHHHH-------HHCCCCEEECCGGGTHHHHHHHHHH
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHHHHHHH-------HhCceeEEEEecCCCCCchHHHHHH
Confidence 6566555544 36556666666677778887752 334543322 17999877764442 234566666
Q ss_pred c-CccEEEEeCC-------HHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHHcCC
Q 009919 194 S-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 256 (522)
Q Consensus 194 ~-~vd~V~ftGS-------~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~n~G 256 (522)
+ .+|.|+||=+ ..-+..|.+.|..+.+|+.--+ ..|+.++.+.+++..
T Consensus 80 ~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 80 EGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp TTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 6 9999999866 4567889999999999988766 456777777776664
No 57
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=58.79 E-value=23 Score=27.57 Aligned_cols=62 Identities=16% Similarity=0.150 Sum_probs=41.6
Q ss_pred cCCHHHHHHHHHHHHHHHH-cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHH
Q 009919 301 LCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 379 (522)
Q Consensus 301 li~~~~~~~~~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 379 (522)
+.+++.+++..+....+++ -|++++..| . +.++.+.. -..-+.|+.|+|.+.|.+
T Consensus 13 v~d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~-------------~~~lEG~~----------~~~~~viieFps~~aa~a 68 (94)
T 3lo3_A 13 PKDAEKLQQYGARVASTLAKYSGEVLVKG-S-------------VEQLHGKF----------EHKAQVILEFPSREDAYN 68 (94)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTTCEEEEEE-E-------------CEEEESCC----------CCSEEEEEEESSHHHHHH
T ss_pred ECCHHHHHHHHHHHHHHHHHcCCEEEEEc-c-------------cccccCCC----------CCCeEEEEECCCHHHHHH
Confidence 3456666666666666554 478887766 3 44444311 125778999999999999
Q ss_pred HHhcCCC
Q 009919 380 LANDSRY 386 (522)
Q Consensus 380 ~~n~~~~ 386 (522)
+.|+.+|
T Consensus 69 ~y~SpeY 75 (94)
T 3lo3_A 69 WYHSEEY 75 (94)
T ss_dssp HHHSHHH
T ss_pred HHCCHHH
Confidence 9998654
No 58
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=58.53 E-value=7.6 Score=34.29 Aligned_cols=118 Identities=14% Similarity=0.110 Sum_probs=78.9
Q ss_pred EEeec-eEEEEEccCc-hhhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEeeec--Ccch
Q 009919 112 EFHPL-GVVGAIVSWN-YPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT--GFAE 187 (522)
Q Consensus 112 ~~~P~-GVv~vi~p~N-~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~--g~~~ 187 (522)
..-|. |.|+++..-+ =+-...+..-...+.+|..++- +.-|+..|.+ ..|++-..++=++ |+++
T Consensus 22 ~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~L~e-------~~Gl~v~~v~k~~eGG~pq 89 (178)
T 1vmd_A 22 IFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGALLQE-------KLGLKVHRLKSGPLGGDQQ 89 (178)
T ss_dssp EEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHHHHH-------HHCCCCEECSCGGGTHHHH
T ss_pred eeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHHHHH-------HhCceeEEEeecCCCCCch
Confidence 33454 7666665544 3666666666667778998775 3445543332 1799876665443 2234
Q ss_pred hhhhHhc-CccEEEEeCC-------HHHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCCHHHHHHHHHHHHHHcCC
Q 009919 188 TGEALVS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 256 (522)
Q Consensus 188 ~~~~L~~-~vd~V~ftGS-------~~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daDl~~aa~~i~~~~~~n~G 256 (522)
.++.+.+ .+|.|+||=+ ..-+..|.+.|..+.+|+.--+ ..|+.++.+.+++..
T Consensus 90 I~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 90 IGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 5666666 9999999866 3357889999999999988776 557778888777664
No 59
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=56.90 E-value=13 Score=31.60 Aligned_cols=58 Identities=19% Similarity=0.178 Sum_probs=43.2
Q ss_pred HHhcCCCCCcEeeecC--c----chhhhhHhc-CccEEEEeCCH-----HHHHHHHHHHhcCCCceeeeC
Q 009919 169 LAAVGAPENLVDVITG--F----AETGEALVS-SVDKIIFVGSP-----GVGRMIMRNASKTLTPVTLEL 226 (522)
Q Consensus 169 l~~ag~p~g~v~vv~g--~----~~~~~~L~~-~vd~V~ftGS~-----~~g~~v~~~aa~~~~pv~lel 226 (522)
|.+.|+|-..|.-++. + +...+.+.+ .+|.|++|=+. .-+..|.+.|..+.+|++..+
T Consensus 63 L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 63 LNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 3468999887776653 2 345555556 99999998655 367889999999999988765
No 60
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=53.34 E-value=5.1 Score=33.76 Aligned_cols=86 Identities=13% Similarity=0.071 Sum_probs=54.6
Q ss_pred hhhhhhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHh-cCCCCCcEeeec-Cc-chhhhhHhc-CccEEEEeC
Q 009919 128 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVIT-GF-AETGEALVS-SVDKIIFVG 203 (522)
Q Consensus 128 P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~-ag~p~g~v~vv~-g~-~~~~~~L~~-~vd~V~ftG 203 (522)
+-...+..-...+.+|..++- +.-|+..| .+ .|++-..++=++ |+ .+.++.+.+ .+|.|+||=
T Consensus 16 ~~~v~~a~~~~~ll~Gf~l~A-----T~gTa~~L--------~e~~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~ 82 (134)
T 2xw6_A 16 EEMVAFCQRHREVLARFPLVA-----TGTTGRRI--------EEATGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFR 82 (134)
T ss_dssp HHHHHHHHHTHHHHTTSCEEE-----CHHHHHHH--------HHHHCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCEEEE-----ccHHHHHH--------HHhhCceEEEEEecCCCCcchHHHHHHCCCccEEEEcc
Confidence 333334444445555666553 33344332 24 799887776555 43 355666666 999999997
Q ss_pred C-------HHHHHHHHHHHhcCCCceeeeC
Q 009919 204 S-------PGVGRMIMRNASKTLTPVTLEL 226 (522)
Q Consensus 204 S-------~~~g~~v~~~aa~~~~pv~lel 226 (522)
+ ..-+..|.+.|..+.+|+.--+
T Consensus 83 ~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 83 DPLTAQPHEPDVQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp CTTTCCTTSCCSHHHHHHHHHHTCCEECSH
T ss_pred CcccCCCccchHHHHHHHHHHcCCCeEcCH
Confidence 6 2346788999988888887665
No 61
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=44.63 E-value=35 Score=28.90 Aligned_cols=64 Identities=13% Similarity=0.179 Sum_probs=43.4
Q ss_pred cCCHHHHHHHHHHHHHHHH-cCCcEeeccCCCCCCCCCCCcccccEEEecCCCCCcccccccccceeeeeecCCHHHHHH
Q 009919 301 LCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 379 (522)
Q Consensus 301 li~~~~~~~~~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~~~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 379 (522)
+.+++.+++..+....+++ .|++++..|.. +.++.+... |.+ .-+.|+.|.|.+.|++
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~-------------~~~lEG~~~-------e~~-~~~viieFPS~~aa~a 103 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF-------------ELMLIGPQD-------EHW-DHVFIAEYPSVAAFVE 103 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE-------------EEEEESCTT-------CCC-SEEEEEEESCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC-------------ceeEECCCC-------CCC-CeEEEEECCCHHHHHH
Confidence 5567777777777666554 58888877652 444544211 111 4678999999999999
Q ss_pred HHhcCC
Q 009919 380 LANDSR 385 (522)
Q Consensus 380 ~~n~~~ 385 (522)
+.|+..
T Consensus 104 ~y~Spe 109 (143)
T 3hhl_A 104 MIRDPV 109 (143)
T ss_dssp HHHCHH
T ss_pred HHcCHH
Confidence 988764
No 62
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=34.29 E-value=1e+02 Score=21.77 Aligned_cols=36 Identities=6% Similarity=0.126 Sum_probs=28.0
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009919 21 QARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 56 (522)
Q Consensus 21 ~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~ 56 (522)
.++.....|..+|.++|..+.......-..+..++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667789999999999999887776666666554
No 63
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=33.24 E-value=46 Score=22.04 Aligned_cols=29 Identities=21% Similarity=0.223 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Q 009919 37 RRQFLRILLKYIIEHQELICEISSRDTGK 65 (522)
Q Consensus 37 R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk 65 (522)
..++|..++..|.+..++|.+++..+..+
T Consensus 13 KqEIL~E~RkElqK~K~EIIeAi~~El~~ 41 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIEAFVQELRK 41 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35789999999999999999998877643
No 64
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=31.16 E-value=25 Score=32.25 Aligned_cols=66 Identities=14% Similarity=0.134 Sum_probs=42.3
Q ss_pred hhHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHHHHhcCCCCCcEeeecCcchhhhhHhc-CccEEEEeCCHHH
Q 009919 132 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGV 207 (522)
Q Consensus 132 ~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~l~~ag~p~g~v~vv~g~~~~~~~L~~-~vd~V~ftGS~~~ 207 (522)
.+..++..+..||-||++.+...-.. .+..+++.. +|.+++++++.+.+- .-. ....+-++.+...
T Consensus 20 ~F~~l~~~vl~GnQiIVrg~~~~~~~--s~~~~L~~l-----LP~~c~~l~~~s~~Y---~~~~~cnilgls~~v~i 86 (226)
T 3v42_A 20 SFRMLAWHVLMGNQVIWKSRDVDLVQ--SAFEVLRTM-----LPVGCVRIIPYSSQY---EEAYRCNFLGLSPHVQI 86 (226)
T ss_dssp HHHHHHHHHHHTCEEEEECSCHHHHH--HHHHHHGGG-----SCGGGCCEEEEESSC---CCTTTCSEEEECTTCCC
T ss_pred HHHHHHHHHhcCCEEEEEcCCHHHHH--HHHHHHHHh-----CCHHHHhccccchhh---cchhheeeecCCCCccc
Confidence 45567778899999999987654332 234555544 899999998654321 112 5566666655443
No 65
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.10 E-value=26 Score=30.81 Aligned_cols=49 Identities=14% Similarity=0.173 Sum_probs=40.2
Q ss_pred cccccceeeeeecCCHHHHHHHH----hcCCCCceeEEecCcHHHHHHHHHHh
Q 009919 359 EEAFGPIMPIMKFNTDEEVVKLA----NDSRYGLGCAVFSGSQHRAREIAAQI 407 (522)
Q Consensus 359 ~E~fgPvl~v~~~~~~~eai~~~----n~~~~gL~a~v~s~d~~~~~~~~~~l 407 (522)
||-||+..+..--.++++|++.+ .+...-|-.|+++.+....+.+.+++
T Consensus 25 ~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~ 77 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQM 77 (178)
T ss_dssp HHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHT
T ss_pred HHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHh
Confidence 56788888887778999999999 77778899999998766666676655
No 66
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=27.57 E-value=1.3e+02 Score=28.39 Aligned_cols=69 Identities=13% Similarity=0.201 Sum_probs=46.1
Q ss_pred HHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc-CccEEEEeCCH-HHHHHHHHHHhcCCCceeeeCCCcceEEEcCCCC
Q 009919 163 RIIQAALAAVGAPENLVDVITGFA-ETGEALVS-SVDKIIFVGSP-GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 239 (522)
Q Consensus 163 ~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~-~vd~V~ftGS~-~~g~~v~~~aa~~~~pv~lelgGk~p~iV~~daD 239 (522)
+.+++.+.++|+..+-+.++.|+. ++...+.. .+|.|++-+.. ..-....+.+.+.++| || +||.+|..
T Consensus 175 ~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~p-----GG---iIv~DD~~ 246 (282)
T 2wk1_A 175 EEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSV-----GG---YVIVDDYM 246 (282)
T ss_dssp HHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEE-----EE---EEEESSCT
T ss_pred HHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCC-----CE---EEEEcCCC
Confidence 456677888999777899999986 55555544 89999998864 2223445555555444 44 67777753
No 67
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.56 E-value=1.4e+02 Score=22.23 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=28.3
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009919 20 AQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 56 (522)
Q Consensus 20 ~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~ 56 (522)
+.++.....|..++.++|..+.......-..+..++.
T Consensus 47 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 47 EFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666789999999999998888777667766654
No 68
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=25.28 E-value=2.6e+02 Score=26.39 Aligned_cols=107 Identities=11% Similarity=-0.009 Sum_probs=68.4
Q ss_pred EEEccCchhhhhhhHHHHHHhhcCCEEEEecCCCch-HH-HHHHHHHHHHHHHhcCCCCCcEeeecCcc-hhhhhHhc-C
Q 009919 120 GAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENAS-WS-GCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS-S 195 (522)
Q Consensus 120 ~vi~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~-~~-~~~l~~~~~~~l~~ag~p~g~v~vv~g~~-~~~~~L~~-~ 195 (522)
..+.-+|.-....+ +-.|=..+-+||+--|+.+. +. ...+..+++.+.+.++.|- ++.+=+|.. +....-++ .
T Consensus 21 ~AfNv~n~e~~~av--l~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VPV-alHlDHg~~~e~i~~ai~~G 97 (286)
T 1gvf_A 21 PAFNIHNAETIQAI--LEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPL-ALHLDHHESLDDIRRKVHAG 97 (286)
T ss_dssp EEEECCSHHHHHHH--HHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCB-EEEEEEECCHHHHHHHHHTT
T ss_pred EEEeeCCHHHHHHH--HHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCcE-EEEcCCCCCHHHHHHHHHcC
Confidence 33434454333222 33445568899999888763 22 2446667777777777773 455545543 44444445 9
Q ss_pred ccEEEEeCCHH-------HHHHHHHHHhcCCCceeeeCCCc
Q 009919 196 VDKIIFVGSPG-------VGRMIMRNASKTLTPVTLELGGK 229 (522)
Q Consensus 196 vd~V~ftGS~~-------~g~~v~~~aa~~~~pv~lelgGk 229 (522)
+..|+|-||.. .-+.+.+.|.+....|-.|+|-.
T Consensus 98 FtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~v 138 (286)
T 1gvf_A 98 VRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRL 138 (286)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeec
Confidence 99999999984 45667777878888999998743
No 69
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.18 E-value=2.2e+02 Score=22.00 Aligned_cols=42 Identities=7% Similarity=0.070 Sum_probs=31.2
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc
Q 009919 22 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT 63 (522)
Q Consensus 22 a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~ 63 (522)
++.....|..++.++|..+.......-.++..++.+--....
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~ 90 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLV 90 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 445566799999999999998888777777777665444433
No 70
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=22.88 E-value=3e+02 Score=22.22 Aligned_cols=28 Identities=14% Similarity=0.273 Sum_probs=21.9
Q ss_pred cccccceeeeeecCCHHHHHHHHhcCCCC
Q 009919 359 EEAFGPIMPIMKFNTDEEVVKLANDSRYG 387 (522)
Q Consensus 359 ~E~fgPvl~v~~~~~~~eai~~~n~~~~g 387 (522)
.|..|- +.|+.++|+|||++++...++.
T Consensus 81 kE~lgG-~~iie~~s~deA~e~A~~~P~~ 108 (124)
T 1s7i_A 81 KEQLGG-FYLIEARDLNQALQIAAKIPPG 108 (124)
T ss_dssp SSEEEE-EEEEEESSHHHHHHHHTTCGGG
T ss_pred ccccee-EEEEEeCCHHHHHHHHHhCCcc
Confidence 455554 4677899999999999988764
No 71
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=21.59 E-value=1.9e+02 Score=22.44 Aligned_cols=41 Identities=7% Similarity=0.075 Sum_probs=32.6
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 009919 20 AQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISS 60 (522)
Q Consensus 20 ~~a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~ 60 (522)
+.++.....|..++.+++..+.......-..+..++..-..
T Consensus 36 eisK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 76 (101)
T 1v63_A 36 ERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVK 76 (101)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34666778899999999999998888877778777776443
No 72
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=20.94 E-value=1.5e+02 Score=21.35 Aligned_cols=32 Identities=16% Similarity=0.254 Sum_probs=23.2
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009919 22 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 53 (522)
Q Consensus 22 a~~a~~~w~~~~~~~R~~~L~~l~~~l~~~~~ 53 (522)
++.....|..+|.++|..+.......-..+..
T Consensus 36 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~ 67 (76)
T 1hry_A 36 SKQLGYQWKMLTEAEKWPFFQEAQKLQAMHRE 67 (76)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45556779999999999887776665555543
No 73
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=20.25 E-value=99 Score=25.12 Aligned_cols=81 Identities=11% Similarity=0.111 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCCCccc--CCeeEEchhhHHHHHHHHHHHHHhccCCCCCCCCCccc-------ccCCHHHHHHHHHHH
Q 009919 244 AQIAVRAALQSSGQNCAG--AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMG-------ALCLLEHSEKLQNLV 314 (522)
Q Consensus 244 a~~i~~~~~~n~Gq~C~a--~~~v~V~~~i~d~f~~~L~~~~~~~~~g~~~~~~~~~g-------~li~~~~~~~~~~~i 314 (522)
+...+.......+-.|.. ....+++.+.++++.+.+.+.+..+.--+|+..+..-. +-.++..+ ..++
T Consensus 34 l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~~---~~ll 110 (135)
T 2v9v_A 34 TRKLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARVY---QALL 110 (135)
T ss_dssp HHHHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHHH---HHHH
T ss_pred HHHHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHHH---HHHH
Confidence 334444445555545554 24448999999999999999998865455554443322 21244443 3455
Q ss_pred HHHHHcCCcEeec
Q 009919 315 NDALDKGAEILAR 327 (522)
Q Consensus 315 ~~a~~~Ga~v~~g 327 (522)
+..+++|.-...|
T Consensus 111 ~~l~~~g~l~~~~ 123 (135)
T 2v9v_A 111 EEWSREGRLQLAA 123 (135)
T ss_dssp HHHHHTTSEEECS
T ss_pred HHHHHCCCEEecC
Confidence 5556667544433
Done!