Your job contains 1 sequence.
>009922
MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER
GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI
SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST
NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEGLRGRTLTLKLKTASF
EVRTRAVTLQKYISSSEDILKHASVLLKAELPVSLRLIGLRVTQFNEDKVRAPSDPTQKT
LTNFMTSGHASKKIVGDQNSLGSDINDDCLIDDKETSVSLDVSETNNYEFGDPVCDNSLP
DLNDENCSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGSCCDGVEEVDKDITPDNKVG
TSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKEESGSDLRILTHRE
RCVRTQRDHIASHRKRKKQKLFEKEGTHIPIDMFFAKRNRNF
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009922
(522 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031050 - symbol:AT1G49980 species:3702 "Arabi... 1436 5.0e-147 1
ZFIN|ZDB-GENE-060526-137 - symbol:polk "polymerase (DNA d... 458 3.0e-64 3
UNIPROTKB|J9P5L3 - symbol:POLK "Uncharacterized protein" ... 476 2.0e-63 3
UNIPROTKB|E2RAS5 - symbol:POLK "Uncharacterized protein" ... 474 3.9e-63 3
UNIPROTKB|Q5Q9G8 - symbol:POLK "Polymerase kappa isoform ... 475 8.8e-62 2
UNIPROTKB|G3V8W7 - symbol:Polk "Protein Polk" species:101... 471 2.1e-61 2
UNIPROTKB|Q9UBT6 - symbol:POLK "DNA polymerase kappa" spe... 475 2.4e-61 2
UNIPROTKB|F1S2I2 - symbol:POLK "Uncharacterized protein" ... 468 2.8e-61 2
MGI|MGI:1349767 - symbol:Polk "polymerase (DNA directed),... 464 1.3e-60 2
UNIPROTKB|Q8AWW1 - symbol:DINB1 "Uncharacterized protein"... 440 7.0e-60 3
UNIPROTKB|A6QNV6 - symbol:POLK "Uncharacterized protein" ... 459 2.4e-59 2
UNIPROTKB|F1NCT8 - symbol:POLK "Uncharacterized protein" ... 433 4.0e-59 3
UNIPROTKB|E9PST4 - symbol:Polk "Protein Polk" species:101... 595 6.6e-58 1
UNIPROTKB|F1NCT7 - symbol:POLK "Uncharacterized protein" ... 416 2.0e-55 2
UNIPROTKB|E9PST3 - symbol:Polk "Protein Polk" species:101... 562 2.1e-54 1
UNIPROTKB|D6RAE5 - symbol:POLK "DNA polymerase kappa" spe... 378 8.7e-53 2
UNIPROTKB|Q5Q9G5 - symbol:POLK "DNA polymerase kappa" spe... 378 8.7e-53 2
UNIPROTKB|Q5Q9G7 - symbol:POLK "DNA polymerase kappa" spe... 378 8.7e-53 2
UNIPROTKB|F1MAB3 - symbol:Polk "Protein Polk" species:101... 471 1.2e-52 2
WB|WBGene00017696 - symbol:polk-1 species:6239 "Caenorhab... 422 1.4e-52 2
UNIPROTKB|D6R9M8 - symbol:POLK "DNA polymerase kappa" spe... 340 1.8e-48 2
ASPGD|ASPL0000039840 - symbol:AN3373 species:162425 "Emer... 498 1.2e-47 1
POMBASE|SPCC553.07c - symbol:kpa1 "DinB translesion DNA r... 442 1.1e-41 1
UNIPROTKB|Q83EN5 - symbol:dinP "DNA polymerase IV" specie... 325 5.5e-29 1
TIGR_CMR|CBU_0280 - symbol:CBU_0280 "DNA-damage-inducible... 325 5.5e-29 1
UNIPROTKB|Q47155 - symbol:dinB species:83333 "Escherichia... 323 9.3e-29 1
UNIPROTKB|Q71Y46 - symbol:dinB "DNA polymerase IV" specie... 323 9.3e-29 1
UNIPROTKB|Q8EHU9 - symbol:dinB "DNA polymerase IV" specie... 320 2.0e-28 1
TIGR_CMR|SO_1114 - symbol:SO_1114 "DNA-damage-inducible p... 320 2.0e-28 1
UNIPROTKB|Q74CQ6 - symbol:dinB "DNA polymerase IV" specie... 318 3.4e-28 1
TIGR_CMR|GSU_1616 - symbol:GSU_1616 "ImpB/MucB/SamB famil... 318 3.4e-28 1
TIGR_CMR|CPS_1040 - symbol:CPS_1040 "DNA polymerase IV" s... 287 1.0e-26 2
UNIPROTKB|Q3ZAI3 - symbol:dinB "DNA polymerase IV" specie... 298 6.1e-26 1
TIGR_CMR|DET_0011 - symbol:DET_0011 "DNA polymerase IV, p... 298 6.1e-26 1
DICTYBASE|DDB_G0287149 - symbol:DDB_G0287149 "UMUC-like D... 308 4.6e-25 1
TIGR_CMR|CHY_1651 - symbol:CHY_1651 "DNA polymerase IV - ... 280 6.7e-23 1
UNIPROTKB|Q9KPS5 - symbol:dinB "DNA polymerase IV" specie... 270 7.7e-23 1
TIGR_CMR|VC_2287 - symbol:VC_2287 "DNA-damage-inducible p... 270 7.7e-23 1
UNIPROTKB|Q81M86 - symbol:dinB "DNA polymerase IV" specie... 271 2.6e-21 1
TIGR_CMR|BA_4366 - symbol:BA_4366 "DNA-damage-inducible p... 271 2.6e-21 1
UNIPROTKB|Q74H50 - symbol:dinB "DNA polymerase IV" specie... 270 3.6e-21 1
TIGR_CMR|GSU_0043 - symbol:GSU_0043 "ImpB/MucB/SamB famil... 270 3.6e-21 1
UNIPROTKB|Q0BZW2 - symbol:dinB "DNA polymerase IV" specie... 260 6.9e-20 1
FB|FBgn0035150 - symbol:Rev1 "Rev1" species:7227 "Drosoph... 242 6.0e-17 1
ZFIN|ZDB-GENE-081105-180 - symbol:si:dkey-57a22.7 "si:dke... 237 3.0e-16 1
UNIPROTKB|E2RC81 - symbol:POLH "Uncharacterized protein" ... 151 4.8e-15 3
UNIPROTKB|B4DG64 - symbol:POLH "DNA polymerase eta" speci... 159 9.0e-15 3
UNIPROTKB|Q9Y253 - symbol:POLH "DNA polymerase eta" speci... 159 1.3e-14 3
UNIPROTKB|E2RPL9 - symbol:REV1 "Uncharacterized protein" ... 221 1.7e-14 1
UNIPROTKB|F1P5H4 - symbol:REV1 "DNA repair protein REV1" ... 221 1.7e-14 1
UNIPROTKB|Q4KWZ7 - symbol:REV1 "DNA repair protein REV1" ... 221 1.7e-14 1
UNIPROTKB|P63987 - symbol:dinB2 "DNA polymerase IV 2" spe... 205 6.6e-14 1
TIGR_CMR|SPO_3280 - symbol:SPO_3280 "DNA polymerase IV, p... 203 2.3e-13 1
UNIPROTKB|Q9UBZ9 - symbol:REV1 "DNA repair protein REV1" ... 209 3.4e-13 1
TAIR|locus:2156319 - symbol:REV1 species:3702 "Arabidopsi... 208 3.8e-13 1
UNIPROTKB|F1N787 - symbol:REV1 "Uncharacterized protein" ... 207 5.4e-13 1
MGI|MGI:1891457 - symbol:Polh "polymerase (DNA directed),... 149 6.2e-13 3
UNIPROTKB|F1STE9 - symbol:REV1 "Uncharacterized protein" ... 206 7.3e-13 1
ASPGD|ASPL0000012133 - symbol:AN3909 species:162425 "Emer... 203 1.4e-12 1
RGD|1309893 - symbol:Polh "polymerase (DNA directed), eta... 149 1.5e-12 3
UNIPROTKB|J3KTN3 - symbol:POLI "DNA polymerase iota" spec... 148 1.8e-12 2
MGI|MGI:1929074 - symbol:Rev1 "REV1 homolog (S. cerevisia... 201 2.6e-12 1
ZFIN|ZDB-GENE-060421-4949 - symbol:polh "polymerase (DNA ... 147 3.0e-12 4
RGD|1306715 - symbol:Rev1 "REV1, polymerase (DNA directed... 199 3.7e-12 1
FB|FBgn0037141 - symbol:DNApol-eta "DNApol-eta" species:7... 177 3.7e-12 2
UNIPROTKB|D4A662 - symbol:Polk "Protein Polk" species:101... 190 7.2e-12 1
TAIR|locus:2156309 - symbol:POLH "Y-family DNA polymerase... 182 3.5e-11 2
UNIPROTKB|F1MZ79 - symbol:POLH "Uncharacterized protein" ... 134 3.8e-11 3
UNIPROTKB|F1PDA5 - symbol:POLI "Uncharacterized protein" ... 156 1.2e-10 2
MGI|MGI:1347081 - symbol:Poli "polymerase (DNA directed),... 157 2.0e-10 3
UNIPROTKB|J3KSW2 - symbol:POLI "DNA polymerase iota" spec... 152 2.5e-10 2
UNIPROTKB|Q9UNA4 - symbol:POLI "DNA polymerase iota" spec... 152 3.8e-10 2
ZFIN|ZDB-GENE-050417-376 - symbol:poli "polymerase (DNA d... 153 4.2e-10 2
CGD|CAL0001748 - symbol:orf19.4412 species:5476 "Candida ... 177 9.1e-10 1
RGD|1305212 - symbol:Poli "polymerase (DNA directed), iot... 146 3.4e-09 2
UNIPROTKB|P63985 - symbol:dinB1 "DNA polymerase IV 1" spe... 166 3.9e-09 1
FB|FBgn0037554 - symbol:DNApol-iota "DNApol-iota" species... 144 9.5e-09 3
UNIPROTKB|F1RRJ6 - symbol:POLH "Uncharacterized protein" ... 133 1.2e-08 3
ASPGD|ASPL0000072145 - symbol:AN4678 species:162425 "Emer... 153 1.6e-08 2
WB|WBGene00014066 - symbol:rev-1 species:6239 "Caenorhabd... 159 7.4e-08 1
UNIPROTKB|G5EH81 - symbol:MGCH7_ch7g688 "Sister chromatid... 132 3.7e-07 2
UNIPROTKB|J3KRG0 - symbol:POLI "DNA polymerase iota" spec... 124 5.4e-07 1
UNIPROTKB|F1NCM3 - symbol:POLH "Uncharacterized protein" ... 144 7.6e-07 2
UNIPROTKB|F1NAG6 - symbol:POLH "Uncharacterized protein" ... 144 8.5e-07 2
POMBASE|SPBC16A3.11 - symbol:eso1 "sister chromatid cohes... 130 9.1e-07 3
POMBASE|SPBC1347.01c - symbol:rev1 "deoxycytidyl transfer... 147 1.3e-06 1
UNIPROTKB|F1MHR0 - symbol:POLI "Uncharacterized protein" ... 144 1.2e-05 2
WB|WBGene00018721 - symbol:polh-1 species:6239 "Caenorhab... 112 2.3e-05 3
UNIPROTKB|Q81NC2 - symbol:BAS3053 "ImpB/mucB/samB family ... 125 0.00011 1
TIGR_CMR|BA_3288 - symbol:BA_3288 "impB/mucB/samB family ... 125 0.00011 1
UNIPROTKB|P04152 - symbol:umuC species:83333 "Escherichia... 119 0.00049 1
CGD|CAL0002818 - symbol:RAD32 species:5476 "Candida albic... 121 0.00079 3
>TAIR|locus:2031050 [details] [associations]
symbol:AT1G49980 species:3702 "Arabidopsis thaliana"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006281 "DNA repair"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 EMBL:CP002684 GO:GO:0016020 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03511 OMA:VHVDCDA HOGENOM:HOG000082709 EMBL:AY508701
IPI:IPI00540157 RefSeq:NP_175420.3 UniGene:At.43723 HSSP:Q97W02
ProteinModelPortal:Q6JDV7 SMR:Q6JDV7 EnsemblPlants:AT1G49980.1
GeneID:841422 KEGG:ath:AT1G49980 TAIR:At1g49980 InParanoid:Q6JDV7
PhylomeDB:Q6JDV7 ProtClustDB:CLSN2681525 Genevestigator:Q6JDV7
Uniprot:Q6JDV7
Length = 671
Score = 1436 (510.6 bits), Expect = 5.0e-147, P = 5.0e-147
Identities = 304/525 (57%), Positives = 373/525 (71%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIARKLCP+LIFVP DFTKYT+YSDLTRKVF YDP+F+A SLDEAYLDITEVCRER
Sbjct: 154 MPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFRNYDPHFIAGSLDEAYLDITEVCRER 213
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G+SG EIAEELR+SVY E GLTCSAGVA NRLLAKVCSDINKPNGQFVL NDR VMTF+
Sbjct: 214 GLSGGEIAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRSTVMTFV 273
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 180
S LP+RKIGGIGKVTEHIL+D GI TCEEM+QKGSLL A+FS S+ADFFLSVGLGLG T
Sbjct: 274 SFLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKGSLLYALFSQSSADFFLSVGLGLGGT 333
Query: 181 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 240
NTPQ R RKSISSERTF+ T D+ LLY KL E+AEMLS DM+KE ASF
Sbjct: 334 NTPQVRSRKSISSERTFAATGDERLLYSKLDELAEMLSHDMKKEGLTARTLTLKLKTASF 393
Query: 241 EVRTRAVTLQKYISSSEDILKHASVLLKAELPVSLRLIGLRVTQFNEDKVRAPSDPTQKT 300
E+R+RAV+LQ+Y SS+DILKHA+ LLKAELPVS+RLIGLR++QF E+ +R SDP+Q T
Sbjct: 394 EIRSRAVSLQRYTCSSDDILKHATKLLKAELPVSVRLIGLRMSQFVEE-IRN-SDPSQGT 451
Query: 301 LTNFMTSGHASKKI--VGDQNSLGSDINDDCLIDDKETSVSLDVSETNNYEFGDPVCDNS 358
+T F+ +S++ + D +S D N +CL +D+ +VS ET++ D V
Sbjct: 452 ITKFIVQKDSSRQAQDLDDNDSFDLDANKNCLSNDESGNVSFGSHETSSAHLKDVV---- 507
Query: 359 LPDLNDENCSFSNK-ISEVEKIHENEVSQLLEGNSLVLRQEEGSCCDGVEEVDKDITPDN 417
+ + + S K I E + + E Q+LEG+SL+ + +E C D +
Sbjct: 508 --EYEERSQIDSGKVIPNQECMKKEERLQILEGDSLLKKYKE--CKPDTSHSMNDNSNAT 563
Query: 418 KVGTSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKEESGSDLRILT 477
+ + Q + W+D YKC LCG E+PPSF+EERQEHSDFHLA+RLQ EE+GS
Sbjct: 564 EAVSVFPQTEPLYWIDGYKCVLCGIELPPSFVEERQEHSDFHLAQRLQNEETGSSSSTTP 623
Query: 478 HRERCVRTQRDHIASHRKRKKQKLFEKEGT-HIPIDMFFAKRNRN 521
+ R + ++ + K KKQK +K+ + HIPI FF K N+N
Sbjct: 624 SKRRILGKEK----VNSKPKKQKPDQKDSSKHIPIHAFFTKSNQN 664
>ZFIN|ZDB-GENE-060526-137 [details] [associations]
symbol:polk "polymerase (DNA directed) kappa"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 ZFIN:ZDB-GENE-060526-137 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GeneTree:ENSGT00530000062942 HOVERGEN:HBG101212 OrthoDB:EOG4Z8XVV
EMBL:BX294131 IPI:IPI00806343 UniGene:Dr.86433 SMR:B0S5R3
Ensembl:ENSDART00000141039 OMA:FISTEDK Uniprot:B0S5R3
Length = 875
Score = 458 (166.3 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 105/256 (41%), Positives = 147/256 (57%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G S E E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +P +R VM F+
Sbjct: 238 GTSAEEAVREMRFRIEQKTSLTASAGIAPNMMLAKVCSDKNKPNGQYRIPPERQVVMDFM 297
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 180
LP+RK+ G+GKVTE +L GI TC ++ Q+ +LL +FS ++ FL + LGLGST
Sbjct: 298 KDLPVRKVSGVGKVTEKMLA-ALGIVTCSQLGQQMALLSLLFSETSWHHFLHISLGLGST 356
Query: 181 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 240
+ RKS+S+ERTF D Y E+ L+ D+Q+E F
Sbjct: 357 YMERDSERKSMSTERTFGEMSDAGEQYSLCKELCHDLAQDLQREGLKGKTVTLKLKNVKF 416
Query: 241 EVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQF--NEDKVRA 292
EV+T+A TLQ + + E+I A LLK E+ P+ LRL+G+RV+ F EDK
Sbjct: 417 EVKTKAFTLQYAVCTEEEIFAAAKDLLKVEIDSVSPQPLKLRLMGVRVSGFISTEDK--- 473
Query: 293 PSDPTQKTLTNFMTSG 308
P QK++ F+ G
Sbjct: 474 --KPLQKSIMGFLQKG 487
Score = 205 (77.2 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 38/60 (63%), Positives = 46/60 (76%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA+KLCP+L+ VPT+F KY S R++F +YDPNFM SLDEAYLDITE +R
Sbjct: 152 MPGFIAKKLCPDLVIVPTNFDKYRAVSAQVREIFSEYDPNFMPMSLDEAYLDITEHLEQR 211
Score = 47 (21.6 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 451 ERQEHSDFHLAERLQKEESG--SDL--RILTHRERC 482
+ EH+D AER Q+E SG S L + L H C
Sbjct: 643 DSNEHTDLSAAER-QEELSGEPSSLESKTLVHYSSC 677
Score = 42 (19.8 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 353 PVCDNSLPDLNDENCSFSNKISEVEK---IHENEVSQLLEGNSLVLRQEE 399
PVC+ + D+N +F+ I E K + NE + L S RQEE
Sbjct: 615 PVCNKEMKDVN--LTAFNQHIDECLKGSAMDSNEHTDL----SAAERQEE 658
>UNIPROTKB|J9P5L3 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 KO:K03511 CTD:51426
EMBL:AAEX03002157 RefSeq:XP_536321.2 Ensembl:ENSCAFT00000046862
GeneID:479180 KEGG:cfa:479180 Uniprot:J9P5L3
Length = 861
Score = 476 (172.6 bits), Expect = 2.0e-63, Sum P(3) = 2.0e-63
Identities = 112/264 (42%), Positives = 159/264 (60%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 119
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ VLPN R AVM F
Sbjct: 287 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQVLPN-RQAVMDF 345
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 179
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGS
Sbjct: 346 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHHFLHISLGLGS 404
Query: 180 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 239
T+ + RKS+S ERTFS Y E+ L+ D+QKE +
Sbjct: 405 THLARDGERKSMSVERTFSEISKAEEQYNLCQELCSELAQDLQKEGLKGRTVTIKLKNVN 464
Query: 240 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQF-NEDKVRA 292
FEV+TRA T+ +S++E+I A LL+ E+ P+ LRL+G+R++ F NE+ R
Sbjct: 465 FEVKTRASTVSSVVSTTEEIFAIAKELLRTEIDADFPHPLRLRLMGVRLSSFPNEEDKRH 524
Query: 293 PSDPTQKTLTNFMTSGHASKKIVG 316
Q+++ F+ +G+ S+ G
Sbjct: 525 Q----QRSIIGFLQAGNQSQSAPG 544
Score = 184 (69.8 bits), Expect = 2.0e-63, Sum P(3) = 2.0e-63
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ YDPNF+A SLDEAYL+IT+ +ER
Sbjct: 152 MPGFIAKRLCPQLIIVPPNFDKYRAVSTEVKEILADYDPNFLAMSLDEAYLNITKHLQER 211
Score = 55 (24.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 375 EVEKI--HENEVSQLLEGNSLVLRQEEGSCCDG-VEEVDKDITPDNKV--GTSSNQ 425
EV K+ HE +S LL +S Q +G+ G EE D T N + GTS+ +
Sbjct: 237 EVNKLREHERSISPLLFDDSPPDLQSQGNPLQGNSEEEDNPQTLQNSIVFGTSAEE 292
Score = 40 (19.1 bits), Expect = 2.0e-63, Sum P(3) = 2.0e-63
Identities = 28/141 (19%), Positives = 53/141 (37%)
Query: 331 IDDKETSV-SLDVSETNNYEFGDPVCD-N--SLPDLNDENCSFSNKISEVEKIHENEVSQ 386
++ KE S SE +YE + N LP+ D N + + + + H E
Sbjct: 669 VNKKENVYPSFSQSEKQDYETHQRNSEINFIELPETED-NPAKAESVDALSDKHSKEECA 727
Query: 387 LLEGNSLVLRQEEGSCCDGVEEVDKDITPDNKVGTSSNQKDQFIWLDDYKCSLCGTEMPP 446
L + + CC + ++ ++ + + S Q+ +L C +C E
Sbjct: 728 SLPSKPFNIEK----CC---QNSSSTVSLED-IASLSRQESSQPYLQALVCPVCNLEQKT 779
Query: 447 SFIEERQEHSDFHLAERLQKE 467
S + H D L + + +E
Sbjct: 780 SDLTLFNVHVDVCLNKGIIQE 800
>UNIPROTKB|E2RAS5 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:TCTELYQ EMBL:AAEX03002157 Ensembl:ENSCAFT00000014935
Uniprot:E2RAS5
Length = 871
Score = 474 (171.9 bits), Expect = 3.9e-63, Sum P(3) = 3.9e-63
Identities = 113/266 (42%), Positives = 160/266 (60%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 119
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ VLPN R AVM F
Sbjct: 295 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQVLPN-RQAVMDF 353
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 179
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGS
Sbjct: 354 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHHFLHISLGLGS 412
Query: 180 TNTPQARF--RKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXX 237
T+ +R RKS+S ERTFS Y E+ L+ D+QKE
Sbjct: 413 THLASSRDGERKSMSVERTFSEISKAEEQYNLCQELCSELAQDLQKEGLKGRTVTIKLKN 472
Query: 238 ASFEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQF-NEDKV 290
+FEV+TRA T+ +S++E+I A LL+ E+ P+ LRL+G+R++ F NE+
Sbjct: 473 VNFEVKTRASTVSSVVSTTEEIFAIAKELLRTEIDADFPHPLRLRLMGVRLSSFPNEEDK 532
Query: 291 RAPSDPTQKTLTNFMTSGHASKKIVG 316
R Q+++ F+ +G+ S+ G
Sbjct: 533 RHQ----QRSIIGFLQAGNQSQSAPG 554
Score = 184 (69.8 bits), Expect = 3.9e-63, Sum P(3) = 3.9e-63
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ YDPNF+A SLDEAYL+IT+ +ER
Sbjct: 160 MPGFIAKRLCPQLIIVPPNFDKYRAVSTEVKEILADYDPNFLAMSLDEAYLNITKHLQER 219
Score = 55 (24.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 375 EVEKI--HENEVSQLLEGNSLVLRQEEGSCCDG-VEEVDKDITPDNKV--GTSSNQ 425
EV K+ HE +S LL +S Q +G+ G EE D T N + GTS+ +
Sbjct: 245 EVNKLREHERSISPLLFDDSPPDLQSQGNPLQGNSEEEDNPQTLQNSIVFGTSAEE 300
Score = 40 (19.1 bits), Expect = 3.9e-63, Sum P(3) = 3.9e-63
Identities = 28/141 (19%), Positives = 53/141 (37%)
Query: 331 IDDKETSV-SLDVSETNNYEFGDPVCD-N--SLPDLNDENCSFSNKISEVEKIHENEVSQ 386
++ KE S SE +YE + N LP+ D N + + + + H E
Sbjct: 679 VNKKENVYPSFSQSEKQDYETHQRNSEINFIELPETED-NPAKAESVDALSDKHSKEECA 737
Query: 387 LLEGNSLVLRQEEGSCCDGVEEVDKDITPDNKVGTSSNQKDQFIWLDDYKCSLCGTEMPP 446
L + + CC + ++ ++ + + S Q+ +L C +C E
Sbjct: 738 SLPSKPFNIEK----CC---QNSSSTVSLED-IASLSRQESSQPYLQALVCPVCNLEQKT 789
Query: 447 SFIEERQEHSDFHLAERLQKE 467
S + H D L + + +E
Sbjct: 790 SDLTLFNVHVDVCLNKGIIQE 810
>UNIPROTKB|Q5Q9G8 [details] [associations]
symbol:POLK "Polymerase kappa isoform 1" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 UniGene:Hs.732105 HGNC:HGNC:9183
HOVERGEN:HBG101212 EMBL:AC026424 EMBL:AY769929 IPI:IPI01013677
SMR:Q5Q9G8 STRING:Q5Q9G8 Ensembl:ENST00000380481 Uniprot:Q5Q9G8
Length = 780
Score = 475 (172.3 bits), Expect = 8.8e-62, Sum P(2) = 8.8e-62
Identities = 108/256 (42%), Positives = 156/256 (60%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 119
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 197 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 255
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 179
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 256 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 314
Query: 180 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 239
T+ + RKS+S ERTFS Y E+ L+ D+QKE +
Sbjct: 315 THLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVN 374
Query: 240 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAP 293
FEV+TRA T+ +S++E+I A LLK E+ P+ LRL+G+R++ F ++ R
Sbjct: 375 FEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEEDRKH 434
Query: 294 SDPTQKTLTNFMTSGH 309
Q+++ F+ +G+
Sbjct: 435 Q---QRSIIGFLQAGN 447
Score = 186 (70.5 bits), Expect = 8.8e-62, Sum P(2) = 8.8e-62
Identities = 35/60 (58%), Positives = 44/60 (73%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ YDPNFMA SLDEAYL+IT+ ER
Sbjct: 62 MPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEER 121
>UNIPROTKB|G3V8W7 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 EMBL:CH473955
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:TCTELYQ UniGene:Rn.92419 Ensembl:ENSRNOT00000033952
Uniprot:G3V8W7
Length = 851
Score = 471 (170.9 bits), Expect = 2.1e-61, Sum P(2) = 2.1e-61
Identities = 128/349 (36%), Positives = 183/349 (52%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ + R AVM FI
Sbjct: 286 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFI 345
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 180
LPIRK+ GIGKVTE +L GI TC E+ Q+ +LL +FS S+ +FL V LGLGST
Sbjct: 346 KDLPIRKVSGIGKVTEKMLL-ALGIVTCTELYQQRALLSLLFSESSWHYFLHVALGLGST 404
Query: 181 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 240
+ + RKS+S ERTFS Y E+ L+ D+QKE F
Sbjct: 405 DLARDGERKSMSVERTFSEINKTEEQYSLCQELCTELAHDLQKEGLKGRTVTIKLKNVDF 464
Query: 241 EVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAPS 294
EV+TRA T+ IS++EDI A LL+ E+ P+ LRL+G+R++ F+ D R
Sbjct: 465 EVKTRASTVPSAISTAEDIFAVAKELLRTEVTAGSPQPLRLRLMGVRMSTFSNDDDRKHQ 524
Query: 295 DPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLIDDKETSVSLDVSETNNYE-FGDP 353
Q+++ F+ +G+ G C D + + + ET+ + F D
Sbjct: 525 ---QRSIIGFLQAGNQGLSPTG------------CTADRTDKTELVKPLETSRKKSFFDK 569
Query: 354 VCDNSLPDLNDE-NCSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGS 401
+P+ D C KI+ + + +E SQ L+ S + E S
Sbjct: 570 KRSERIPNCQDPPRC----KIAGEQALQASEPSQALKKMSESFKTSENS 614
Score = 190 (71.9 bits), Expect = 2.1e-61, Sum P(2) = 2.1e-61
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ +YDPNFMA SLDEAYL+IT+ +ER
Sbjct: 151 MPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQER 210
Score = 40 (19.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 13/48 (27%), Positives = 19/48 (39%)
Query: 272 PVSLR-LIGLRVTQFNEDKVRAPSDPTQKTLTNFMTSGHASKKIVGDQ 318
PV R G+ + FNE P+ + + HAS +G Q
Sbjct: 623 PVCFREQEGISLEAFNEHVDACLDGPSTSENSEMPSYSHASSADIGQQ 670
>UNIPROTKB|Q9UBT6 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IMP]
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 EMBL:CH471084 EMBL:AB036934
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 KO:K03511
EMBL:AB027564 EMBL:AF163570 EMBL:AF194973 EMBL:AF315602
EMBL:AF318313 EMBL:AK091659 EMBL:AK314610 EMBL:AY273797
EMBL:BC014955 EMBL:BC050718 EMBL:AB036935 IPI:IPI00033151
IPI:IPI00218100 IPI:IPI00552440 IPI:IPI00552703 RefSeq:NP_057302.1
UniGene:Hs.732105 PDB:1T94 PDB:2OH2 PDB:2W7O PDB:2W7P PDB:3IN5
PDB:3PZP PDBsum:1T94 PDBsum:2OH2 PDBsum:2W7O PDBsum:2W7P
PDBsum:3IN5 PDBsum:3PZP ProteinModelPortal:Q9UBT6 SMR:Q9UBT6
IntAct:Q9UBT6 STRING:Q9UBT6 PhosphoSite:Q9UBT6 DMDM:59798438
PaxDb:Q9UBT6 PRIDE:Q9UBT6 Ensembl:ENST00000241436
Ensembl:ENST00000352007 Ensembl:ENST00000508526
Ensembl:ENST00000510815 Ensembl:ENST00000515295 GeneID:51426
KEGG:hsa:51426 UCSC:uc003kdw.3 UCSC:uc003keb.3 UCSC:uc010izq.3
CTD:51426 GeneCards:GC05P074843 HGNC:HGNC:9183 MIM:605650
neXtProt:NX_Q9UBT6 PharmGKB:PA33503 HOVERGEN:HBG101212
InParanoid:Q9UBT6 OMA:TCTELYQ OrthoDB:EOG4Z8XVV BindingDB:Q9UBT6
ChEMBL:CHEMBL5365 EvolutionaryTrace:Q9UBT6 GenomeRNAi:51426
NextBio:54977 ArrayExpress:Q9UBT6 Bgee:Q9UBT6 Genevestigator:Q9UBT6
Uniprot:Q9UBT6
Length = 870
Score = 475 (172.3 bits), Expect = 2.4e-61, Sum P(2) = 2.4e-61
Identities = 108/256 (42%), Positives = 156/256 (60%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 119
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 287 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 345
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 179
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 346 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 404
Query: 180 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 239
T+ + RKS+S ERTFS Y E+ L+ D+QKE +
Sbjct: 405 THLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVN 464
Query: 240 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAP 293
FEV+TRA T+ +S++E+I A LLK E+ P+ LRL+G+R++ F ++ R
Sbjct: 465 FEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEEDRKH 524
Query: 294 SDPTQKTLTNFMTSGH 309
Q+++ F+ +G+
Sbjct: 525 Q---QRSIIGFLQAGN 537
Score = 186 (70.5 bits), Expect = 2.4e-61, Sum P(2) = 2.4e-61
Identities = 35/60 (58%), Positives = 44/60 (73%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ YDPNFMA SLDEAYL+IT+ ER
Sbjct: 152 MPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEER 211
>UNIPROTKB|F1S2I2 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
KO:K03511 CTD:51426 OMA:TCTELYQ EMBL:CU466449 RefSeq:XP_003123756.1
Ensembl:ENSSSCT00000015383 GeneID:100518650 KEGG:ssc:100518650
Uniprot:F1S2I2
Length = 878
Score = 468 (169.8 bits), Expect = 2.8e-61, Sum P(2) = 2.8e-61
Identities = 128/370 (34%), Positives = 193/370 (52%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 119
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R VM F
Sbjct: 294 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQVVMDF 352
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 179
I LPIRK+ GIGKVTE +L+ GI TC ++ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 353 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTDLYQQRALLSLLFSETSWHYFLHISLGLGS 411
Query: 180 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 239
T P+ RKS+S ERTFS Y E+ L+ D+QKE
Sbjct: 412 TCLPRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKEGLKGRTVTLKLKNVD 471
Query: 240 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQF-NEDKVRA 292
FEV+TRA T+ IS++E+I A LL+ E+ P+ LRL+G+R++ F NE++ +
Sbjct: 472 FEVKTRASTVLSVISTAEEIFAIAKELLRTEIDADFPHPLRLRLMGVRLSSFPNEEEKKH 531
Query: 293 PSDPTQKTLTNFMTSGHASKKIVG------DQNSLGSDI---NDDCLIDDKETSVSLDVS 343
Q+++ F+ G+ + G D++ + + D K + L
Sbjct: 532 Q----QRSIIGFLQPGNQTLSATGCMLEKTDKDQFPKPLEMSHKKSFFDKKRSERKLSHQ 587
Query: 344 ETNNYEFGDPVCDNSLPDLNDENCSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGSCC 403
+T E D SLP + +E + ++ Q+ V +E+GS
Sbjct: 588 DTFKSEIVDR---QSLPTSQSFQVLKKKRSENLETLENSDNGQVF--TCPVCFREQGSI- 641
Query: 404 DGVEEVDKDI 413
G+E +K +
Sbjct: 642 -GLEAFNKHV 650
Score = 193 (73.0 bits), Expect = 2.8e-61, Sum P(2) = 2.8e-61
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++F YDPNFMA SLDEAYL+IT+ ER
Sbjct: 159 MPGFIAKRLCPQLIIVPPNFDKYRAVSSEVKEIFADYDPNFMALSLDEAYLNITKHLEER 218
>MGI|MGI:1349767 [details] [associations]
symbol:Polk "polymerase (DNA directed), kappa" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0006297 "nucleotide-excision repair, DNA gap
filling" evidence=ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=TAS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 MGI:MGI:1349767 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 GO:GO:0003887
GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
CleanEx:MM_POLK PDB:4FJO PDBsum:4FJO GeneTree:ENSGT00530000062942
HOGENOM:HOG000082711 KO:K03511 CTD:51426 HOVERGEN:HBG101212
OMA:TCTELYQ OrthoDB:EOG4Z8XVV EMBL:AB027563 EMBL:AF163571
EMBL:AB040765 EMBL:BC052820 IPI:IPI00131620 IPI:IPI00462547
RefSeq:NP_036178.1 UniGene:Mm.89926 PDB:2LSJ PDBsum:2LSJ
ProteinModelPortal:Q9QUG2 SMR:Q9QUG2 IntAct:Q9QUG2 STRING:Q9QUG2
PhosphoSite:Q9QUG2 PRIDE:Q9QUG2 Ensembl:ENSMUST00000022172
GeneID:27015 KEGG:mmu:27015 UCSC:uc007rne.1 InParanoid:Q9QUG2
NextBio:304949 Bgee:Q9QUG2 Genevestigator:Q9QUG2
GermOnline:ENSMUSG00000021668 Uniprot:Q9QUG2
Length = 852
Score = 464 (168.4 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 109/264 (41%), Positives = 158/264 (59%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 119
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LP+ R AVM F
Sbjct: 286 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPS-RSAVMDF 344
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 179
I LPIRK+ GIGKVTE +L GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 345 IKDLPIRKVSGIGKVTEKMLM-ALGIVTCTELYQQRALLSLLFSETSWHYFLHIALGLGS 403
Query: 180 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 239
T+ + RKS+S ERTFS Y E+ L+ D+QKE +
Sbjct: 404 TDLARDGERKSMSVERTFSEISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVN 463
Query: 240 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAP 293
FEV+TRA T+ IS++E+I A LL+ E+ P+ LRL+G+R++ F+ + R
Sbjct: 464 FEVKTRASTVPAAISTAEEIFAIAKELLRTEVNVGSPHPLRLRLMGVRMSTFSSEDDRKH 523
Query: 294 SDPTQKTLTNFMTSGHASKKIVGD 317
Q+++ F+ +G+ + GD
Sbjct: 524 Q---QRSIIGFLQAGNQALSSTGD 544
Score = 190 (71.9 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ +YDPNFMA SLDEAYL+IT+ +ER
Sbjct: 151 MPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQER 210
Score = 37 (18.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 13/55 (23%), Positives = 20/55 (36%)
Query: 272 PVSLR-LIGLRVTQFNEDKVRAPSDPTQKTLTNFMTSGHASKKIVGDQNSLGSDI 325
PV R G+ + FNE P+ + HAS +G + + I
Sbjct: 623 PVCFREQEGVSLEAFNEHVDECLDGPSTSENSKISCYSHASSADIGQKEDVHPSI 677
>UNIPROTKB|Q8AWW1 [details] [associations]
symbol:DINB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0019985 "translesion synthesis" evidence=TAS]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR006642
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734
GO:GO:0005654 GO:GO:0003684 Reactome:REACT_115612 GO:GO:0003887
GO:GO:0006297 GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 HSSP:P96022
GeneTree:ENSGT00530000062942 HOGENOM:HOG000082711 KO:K03511
CTD:51426 HOVERGEN:HBG101212 OMA:TCTELYQ EMBL:AADN02067159
EMBL:AADN02067160 EMBL:AADN02067161 EMBL:AY118271 IPI:IPI00586140
RefSeq:NP_989514.1 UniGene:Gga.42393 SMR:Q8AWW1 STRING:Q8AWW1
Ensembl:ENSGALT00000024123 GeneID:374003 KEGG:gga:374003
InParanoid:Q8AWW1 NextBio:20813531 Uniprot:Q8AWW1
Length = 867
Score = 440 (159.9 bits), Expect = 7.0e-60, Sum P(3) = 7.0e-60
Identities = 102/254 (40%), Positives = 151/254 (59%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G S E +E+R + ++ LT SAG+APN +LAK+CSD NKPNGQ + +R AV+ FI
Sbjct: 280 GTSAEEAVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQCRISPERQAVLDFI 339
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 180
LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGST
Sbjct: 340 KDLPIRKVPGIGKVTEKMLK-ALGIVTCSELYQQRALLSLLFSEASWRSFLDISLGLGST 398
Query: 181 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 240
+ + RKS+S+ERTFS Y E+ L+ D+QKE +F
Sbjct: 399 HLEKDGERKSMSTERTFSEISKAEDQYSLCQELCRELAQDLQKEGLKGKTVTLKLKNVNF 458
Query: 241 EVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAPS 294
EV+TRA T+ +S+ ++I A +LL E+ P+ +RL+G+RV+ F ++ +
Sbjct: 459 EVKTRASTVLSSVSTEDEIFAVAKMLLGTEIDSVAPHPLRIRLMGVRVSGFLSEEEKKYQ 518
Query: 295 DPTQKTLTNFMTSG 308
QK++ +F+ SG
Sbjct: 519 ---QKSIKSFLKSG 529
Score = 173 (66.0 bits), Expect = 7.0e-60, Sum P(3) = 7.0e-60
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA+KLCP L VP +F KY S +++ +YDP+FM LDEAYL++TE ER
Sbjct: 153 MPGFIAKKLCPHLTIVPLNFEKYRKVSKEVKEILAEYDPHFMPMGLDEAYLNVTEHLEER 212
Score = 56 (24.8 bits), Expect = 7.0e-60, Sum P(3) = 7.0e-60
Identities = 26/107 (24%), Positives = 45/107 (42%)
Query: 363 NDENCSFSNKISEVEKIHENE-VSQLLEGNSLVLRQEEGSC-CDGVEEVDKDITPDNKVG 420
N EN + +++ S + + ++ L N+L + G GV+ + NKV
Sbjct: 543 NQENLTKNSEASSRGSFFDKKRAARQLNSNNLFPNESVGKQHFHGVKSSANFVEEANKV- 601
Query: 421 TSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKE 467
+ QK + + C +C E S +EE H D LA L ++
Sbjct: 602 -TDLQKSNVCEI--FTCPVCFEEQSSSNLEEINRHVDECLAGSLVED 645
>UNIPROTKB|A6QNV6 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006297 "nucleotide-excision repair, DNA gap filling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 GO:GO:0005634 GO:GO:0003684
GO:GO:0003887 GO:GO:0006297 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879
GeneTree:ENSGT00530000062942 HOGENOM:HOG000082711 KO:K03511
CTD:51426 HOVERGEN:HBG101212 OMA:TCTELYQ OrthoDB:EOG4Z8XVV
EMBL:DAAA02027742 EMBL:DAAA02027743 EMBL:BC149024 IPI:IPI00867010
RefSeq:NP_001095728.1 UniGene:Bt.38144 SMR:A6QNV6 STRING:A6QNV6
Ensembl:ENSBTAT00000005265 GeneID:541218 KEGG:bta:541218
InParanoid:A6QNV6 NextBio:20879073 Uniprot:A6QNV6
Length = 877
Score = 459 (166.6 bits), Expect = 2.4e-59, Sum P(2) = 2.4e-59
Identities = 108/264 (40%), Positives = 158/264 (59%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 119
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 294 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 352
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 179
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGS
Sbjct: 353 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHHFLHISLGLGS 411
Query: 180 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 239
T+ + RKS+S ERTFS Y E+ L+ D+QK+ +
Sbjct: 412 THLARDGERKSMSVERTFSEISKAEEQYSLCQELCSELAQDLQKKGLKGRTVTIKLKNVN 471
Query: 240 FEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQF-NEDKVRA 292
FEV+TRA T+ +S++E+I A LL+ E+ P+ LRL+G+R++ F NE++ +
Sbjct: 472 FEVKTRASTVSTVVSTAEEIFVIAKELLRTEIDADFPQPLRLRLMGVRLSGFPNEEEKKH 531
Query: 293 PSDPTQKTLTNFMTSGHASKKIVG 316
Q+++ F+ G+ + G
Sbjct: 532 Q----QRSIIGFLQPGNQALSATG 551
Score = 184 (69.8 bits), Expect = 2.4e-59, Sum P(2) = 2.4e-59
Identities = 35/60 (58%), Positives = 44/60 (73%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ YDPNFMA SLDEAYL+IT+ ER
Sbjct: 159 MPGFIAKRLCPQLIIVPPNFDKYQAVSREVKEILTDYDPNFMAMSLDEAYLNITKHLEER 218
>UNIPROTKB|F1NCT8 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
SMART:SM00734 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 EMBL:AADN02067159
EMBL:AADN02067160 EMBL:AADN02067161 IPI:IPI00680917
Ensembl:ENSGALT00000032847 ArrayExpress:F1NCT8 Uniprot:F1NCT8
Length = 862
Score = 433 (157.5 bits), Expect = 4.0e-59, Sum P(3) = 4.0e-59
Identities = 102/255 (40%), Positives = 151/255 (59%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G S E +E+R + ++ LT SAG+APN +LAK+CSD NKPNGQ + +R AV+ FI
Sbjct: 276 GTSAEEAVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQCRISPERQAVLDFI 335
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 180
LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGST
Sbjct: 336 KDLPIRKVPGIGKVTEKMLK-ALGIVTCSELYQQRALLSLLFSEASWRSFLDISLGLGST 394
Query: 181 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 240
+ + RKS+S+ERTFS Y E+ L+ D+QKE +F
Sbjct: 395 HLEKDGERKSMSTERTFSEISKAEDQYSLCQELCRELAQDLQKEGLKGKTVTLKLKNVNF 454
Query: 241 EVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRL-IGLRVTQFNEDKVRAP 293
EV+TRA T+ +S+ ++I A +LL E+ P+ +RL +G+RV+ F ++ +
Sbjct: 455 EVKTRASTVLSSVSTEDEIFAVAKMLLGTEIDSVAPHPLRIRLMVGVRVSGFLSEEEKKY 514
Query: 294 SDPTQKTLTNFMTSG 308
QK++ +F+ SG
Sbjct: 515 Q---QKSIKSFLKSG 526
Score = 173 (66.0 bits), Expect = 4.0e-59, Sum P(3) = 4.0e-59
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA+KLCP L VP +F KY S +++ +YDP+FM LDEAYL++TE ER
Sbjct: 152 MPGFIAKKLCPHLTIVPLNFEKYRKVSKEVKEILAEYDPHFMPMGLDEAYLNVTEHLEER 211
Score = 56 (24.8 bits), Expect = 4.0e-59, Sum P(3) = 4.0e-59
Identities = 26/107 (24%), Positives = 45/107 (42%)
Query: 363 NDENCSFSNKISEVEKIHENE-VSQLLEGNSLVLRQEEGSC-CDGVEEVDKDITPDNKVG 420
N EN + +++ S + + ++ L N+L + G GV+ + NKV
Sbjct: 540 NQENLTKNSEASSRGSFFDKKRAARQLNSNNLFPNESVGKQHFHGVKSSANFVEEANKV- 598
Query: 421 TSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKE 467
+ QK + + C +C E S +EE H D LA L ++
Sbjct: 599 -TDLQKSNVCEI--FTCPVCFEEQSSSNLEEINRHVDECLAGSLVED 642
>UNIPROTKB|E9PST4 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR006642 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 SMART:SM00734 RGD:620058 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0006281
GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879 IPI:IPI00777177
Ensembl:ENSRNOT00000061462 ArrayExpress:E9PST4 Uniprot:E9PST4
Length = 771
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 158/409 (38%), Positives = 221/409 (54%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ +YDPNFMA SLDEAYL+IT+ +ER
Sbjct: 151 MPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQER 210
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G E+ R + + G G+APN +LAKVCSD NKPNGQ+ + R AVM FI
Sbjct: 211 --QGWP--EDKRR-YFIKMGNCRKIGIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFI 265
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 180
LPIRK+ GIGKVTE +L GI TC E+ Q+ +LL +FS S+ +FL V LGLGST
Sbjct: 266 KDLPIRKVSGIGKVTEKMLL-ALGIVTCTELYQQRALLSLLFSESSWHYFLHVALGLGST 324
Query: 181 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 240
+ + RKS+S ERTFS Y E+ L+ D+QKE F
Sbjct: 325 DLARDGERKSMSVERTFSEINKTEEQYSLCQELCTELAHDLQKEGLKGRTVTIKLKNVDF 384
Query: 241 EVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAPS 294
EV+TRA T+ IS++EDI A LL+ E+ P+ LRL+G+R++ F+ D R
Sbjct: 385 EVKTRASTVPSAISTAEDIFAVAKELLRTEVTAGSPQPLRLRLMGVRMSTFSNDDDRKHQ 444
Query: 295 DPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLIDDKETSVSLDVSETNNYE-FGDP 353
Q+++ F+ +G+ G C D + + + ET+ + F D
Sbjct: 445 ---QRSIIGFLQAGNQGLSPTG------------CTADRTDKTELVKPLETSRKKSFFDK 489
Query: 354 VCDNSLPDLNDE-NCSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGS 401
+P+ D C KI+ + + +E SQ L+ S + E S
Sbjct: 490 KRSERIPNCQDPPRC----KIAGEQALQASEPSQALKKMSESFKTSENS 534
>UNIPROTKB|F1NCT7 [details] [associations]
symbol:POLK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
EMBL:AADN02067159 EMBL:AADN02067160 EMBL:AADN02067161
IPI:IPI00680100 Ensembl:ENSGALT00000032848 ArrayExpress:F1NCT7
Uniprot:F1NCT7
Length = 543
Score = 416 (151.5 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 102/253 (40%), Positives = 144/253 (56%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G S E +E+R + ++ LT SAG+APN +LAK+CSD NKPNGQ + +R AV+ FI
Sbjct: 281 GTSAEEAVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQCRISPERQAVLDFI 340
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 180
LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ FL + LGLGST
Sbjct: 341 KDLPIRKVPGIGKVTEKMLK-ALGIVTCSELYQQRALLSLLFSEASWRSFLDISLGLGST 399
Query: 181 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 240
+ + RKS+S+ERTFS Y E+ L+ D+QKE +F
Sbjct: 400 HLEKDGERKSMSTERTFSEISKAEDQYSLCQELCRELAQDLQKEGLKGKTVTLKLKNVNF 459
Query: 241 EVRTRAVTLQKYISSSEDILKHASVLLKAELPVSLRLIGLRVTQFNEDKVRAPSDPTQKT 300
EV+TRA T+ +S+ ++I A +LL E+ S+ LR+ D +R S +
Sbjct: 460 EVKTRASTVLSSVSTEDEIFAVAKMLLGTEID-SVAPHPLRIRLM--DSLRKTSQ-RKAA 515
Query: 301 LTNFMTSGHASKK 313
+ TS ASKK
Sbjct: 516 WSGLTTSQSASKK 528
Score = 173 (66.0 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA+KLCP L VP +F KY S +++ +YDP+FM LDEAYL++TE ER
Sbjct: 152 MPGFIAKKLCPHLTIVPLNFEKYRKVSKEVKEILAEYDPHFMPMGLDEAYLNVTEHLEER 211
>UNIPROTKB|E9PST3 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 IPI:IPI00777918 Ensembl:ENSRNOT00000061463
ArrayExpress:E9PST3 Uniprot:E9PST3
Length = 793
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 160/427 (37%), Positives = 223/427 (52%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ +YDPNFMA SLDEAYL+IT+ +ER
Sbjct: 151 MPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQER 210
Query: 61 -G---------IS-------GIEIAEELRTSVYEEAGLTCSAG-VAPNRLLAKVCSDINK 102
G I GI + + T + L G +APN +LAKVCSD NK
Sbjct: 211 QGWPEDKRRYFIKMGNCRKIGI-LTLAMTTGNFHLLRLAQPQGCIAPNTMLAKVCSDKNK 269
Query: 103 PNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVF 162
PNGQ+ + R AVM FI LPIRK+ GIGKVTE +L GI TC E+ Q+ +LL +F
Sbjct: 270 PNGQYQIVPSRSAVMDFIKDLPIRKVSGIGKVTEKMLL-ALGIVTCTELYQQRALLSLLF 328
Query: 163 SHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQ 222
S S+ +FL V LGLGST+ + RKS+S ERTFS Y E+ L+ D+Q
Sbjct: 329 SESSWHYFLHVALGLGSTDLARDGERKSMSVERTFSEINKTEEQYSLCQELCTELAHDLQ 388
Query: 223 KEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLR 276
KE FEV+TRA T+ IS++EDI A LL+ E+ P+ LR
Sbjct: 389 KEGLKGRTVTIKLKNVDFEVKTRASTVPSAISTAEDIFAVAKELLRTEVTAGSPQPLRLR 448
Query: 277 LIGLRVTQFNEDKVRAPSDPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLIDDKET 336
L+G+R++ F+ D R Q+++ F+ +G+ G C D +
Sbjct: 449 LMGVRMSTFSNDDDRKHQ---QRSIIGFLQAGNQGLSPTG------------CTADRTDK 493
Query: 337 SVSLDVSETNNYE-FGDPVCDNSLPDLNDE-NCSFSNKISEVEKIHENEVSQLLEGNSLV 394
+ + ET+ + F D +P+ D C KI+ + + +E SQ L+ S
Sbjct: 494 TELVKPLETSRKKSFFDKKRSERIPNCQDPPRC----KIAGEQALQASEPSQALKKMSES 549
Query: 395 LRQEEGS 401
+ E S
Sbjct: 550 FKTSENS 556
>UNIPROTKB|D6RAE5 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:CH471084
EMBL:AC010245 EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879
HOGENOM:HOG000082711 UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424
IPI:IPI00966124 SMR:D6RAE5 Ensembl:ENST00000503479 Uniprot:D6RAE5
Length = 396
Score = 378 (138.1 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 82/165 (49%), Positives = 109/165 (66%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 119
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 221 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 279
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 179
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 280 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 338
Query: 180 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKE 224
T+ + RKS+S ERTFS Y E+ L+ D+QKE
Sbjct: 339 THLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKE 383
Score = 186 (70.5 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 35/60 (58%), Positives = 44/60 (73%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ YDPNFMA SLDEAYL+IT+ ER
Sbjct: 86 MPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEER 145
>UNIPROTKB|Q5Q9G5 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082711
UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424 EMBL:AY769932
IPI:IPI00967663 SMR:Q5Q9G5 STRING:Q5Q9G5 Ensembl:ENST00000504026
UCSC:uc003kee.3 HOVERGEN:HBG056846 Uniprot:Q5Q9G5
Length = 461
Score = 378 (138.1 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 82/165 (49%), Positives = 109/165 (66%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 119
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 287 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 345
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 179
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 346 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 404
Query: 180 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKE 224
T+ + RKS+S ERTFS Y E+ L+ D+QKE
Sbjct: 405 THLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKE 449
Score = 186 (70.5 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 35/60 (58%), Positives = 44/60 (73%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ YDPNFMA SLDEAYL+IT+ ER
Sbjct: 152 MPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEER 211
>UNIPROTKB|Q5Q9G7 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:AC010245
EMBL:AC116341 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082711
UniGene:Hs.732105 HGNC:HGNC:9183 EMBL:AC026424 HOVERGEN:HBG056846
EMBL:AY769930 IPI:IPI00965083 SMR:Q5Q9G7 STRING:Q5Q9G7
Ensembl:ENST00000509126 Uniprot:Q5Q9G7
Length = 489
Score = 378 (138.1 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 82/165 (49%), Positives = 109/165 (66%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 119
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 287 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 345
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 179
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 346 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 404
Query: 180 TNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKE 224
T+ + RKS+S ERTFS Y E+ L+ D+QKE
Sbjct: 405 THLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKE 449
Score = 186 (70.5 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 35/60 (58%), Positives = 44/60 (73%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ YDPNFMA SLDEAYL+IT+ ER
Sbjct: 152 MPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEER 211
>UNIPROTKB|F1MAB3 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00734 RGD:620058
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 IPI:IPI00372895 Ensembl:ENSRNOT00000040799
ArrayExpress:F1MAB3 Uniprot:F1MAB3
Length = 711
Score = 471 (170.9 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 128/349 (36%), Positives = 183/349 (52%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ + R AVM FI
Sbjct: 150 GTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQIVPSRSAVMDFI 209
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 180
LPIRK+ GIGKVTE +L GI TC E+ Q+ +LL +FS S+ +FL V LGLGST
Sbjct: 210 KDLPIRKVSGIGKVTEKMLL-ALGIVTCTELYQQRALLSLLFSESSWHYFLHVALGLGST 268
Query: 181 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASF 240
+ + RKS+S ERTFS Y E+ L+ D+QKE F
Sbjct: 269 DLARDGERKSMSVERTFSEINKTEEQYSLCQELCTELAHDLQKEGLKGRTVTIKLKNVDF 328
Query: 241 EVRTRAVTLQKYISSSEDILKHASVLLKAEL------PVSLRLIGLRVTQFNEDKVRAPS 294
EV+TRA T+ IS++EDI A LL+ E+ P+ LRL+G+R++ F+ D R
Sbjct: 329 EVKTRASTVPSAISTAEDIFAVAKELLRTEVTAGSPQPLRLRLMGVRMSTFSNDDDRKHQ 388
Query: 295 DPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLIDDKETSVSLDVSETNNYE-FGDP 353
Q+++ F+ +G+ G C D + + + ET+ + F D
Sbjct: 389 ---QRSIIGFLQAGNQGLSPTG------------CTADRTDKTELVKPLETSRKKSFFDK 433
Query: 354 VCDNSLPDLNDE-NCSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGS 401
+P+ D C KI+ + + +E SQ L+ S + E S
Sbjct: 434 KRSERIPNCQDPPRC----KIAGEQALQASEPSQALKKMSESFKTSENS 478
Score = 98 (39.6 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 34 FCKYDPNFMAASLDEAYLDITEVCRER 60
F +YDPNFMA SLDEAYL+IT+ +ER
Sbjct: 48 FYEYDPNFMAMSLDEAYLNITQHLQER 74
>WB|WBGene00017696 [details] [associations]
symbol:polk-1 species:6239 "Caenorhabditis elegans"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 GO:GO:0003887 EMBL:FO080222 eggNOG:COG0389
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 EMBL:FO080380 GeneTree:ENSGT00530000062942
PIR:S44637 RefSeq:NP_001122692.1 RefSeq:NP_001122693.1
UniGene:Cel.10581 ProteinModelPortal:P34409 SMR:P34409
STRING:P34409 EnsemblMetazoa:F22B7.6a GeneID:176209
KEGG:cel:CELE_F22B7.6 UCSC:F22B7.6b.2 CTD:176209 WormBase:F22B7.6a
WormBase:F22B7.6b HOGENOM:HOG000082711 InParanoid:P34409 KO:K03511
OMA:FMLAKIC NextBio:891590 Uniprot:P34409
Length = 596
Score = 422 (153.6 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 113/278 (40%), Positives = 156/278 (56%)
Query: 59 ERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMT 118
E G E E+R V + GLTCSAG+A N +LAK+CSD+NKPNGQ+VL ND+ A+M
Sbjct: 247 EFGTGREEAVREIRFRVEQLTGLTCSAGIASNFMLAKICSDLNKPNGQYVLENDKNAIME 306
Query: 119 FISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGL- 177
F+ LPIRK+GGIG+V E L+ I T +M K +L F+ + + FL LGL
Sbjct: 307 FLKDLPIRKVGGIGRVCEAQLK-AMDIQTVGDMNLKKNLYPLCFTPLSQESFLRTALGLP 365
Query: 178 GSTNTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXX 237
G + R RKSIS ERTFS T D +L + EI ML D++K
Sbjct: 366 GRPSESDPR-RKSISVERTFSPTSDFNILLEEHQEICRMLEEDVRKSGIVGGKTVTLKLK 424
Query: 238 -ASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPVSLRLIGLRVTQ--FNEDKVRAPS 294
+SF+V TR++T + S EDI K + LL+ E +RL+G+R++Q F ED+ +
Sbjct: 425 LSSFDVLTRSLTPSDVVKSLEDIQKFSLELLEKEKGKEIRLLGVRLSQLIFEEDEKKR-- 482
Query: 295 DPTQKTLTNFMTSGHASKKIVGDQNSLGSD-INDDCLI 331
KT+T F KK+ QN GS+ ++DD +I
Sbjct: 483 ---SKTITEFWNE----KKLQ-IQNLQGSENVDDDDVI 512
Score = 140 (54.3 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITE 55
MPGFI+ KLCP L VP ++ KYT S ++F +YD + SLDEA++D+T+
Sbjct: 134 MPGFISNKLCPSLTIVPGNYPKYTKVSRQFSQIFMEYDSDVGMMSLDEAFIDLTD 188
Score = 108 (43.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 55/237 (23%), Positives = 101/237 (42%)
Query: 294 SDPTQKTLTNFMTSGHASK-KIVGDQNS-----LGSDINDDCLIDDKETSVSLDVSE--- 344
SDP +K+++ T S I+ +++ L D+ ++ K ++ L +S
Sbjct: 371 SDPRRKSISVERTFSPTSDFNILLEEHQEICRMLEEDVRKSGIVGGKTVTLKLKLSSFDV 430
Query: 345 -TNNYEFGDPVCDNSLPDLNDENCSFSNKISEVEKIHENEVSQL-LEGNSLVLRQEEGSC 402
T + D V SL D+ FS ++ E EK E+ L + + L+ ++E
Sbjct: 431 LTRSLTPSDVV--KSLEDIQ----KFSLELLEKEK--GKEIRLLGVRLSQLIFEEDEKKR 482
Query: 403 CDGVEEV--DKDITPDNKVGTSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHL 460
+ E +K + N G+ + D I +D C +CGT+ +E R + + H+
Sbjct: 483 SKTITEFWNEKKLQIQNLQGSENVDDDDVIMMDTRPCPICGTD-----VENRLDVMNCHV 537
Query: 461 AERLQKEESGSDLRILTHRERCVRTQRDHIASHRKRKKQKLFEKEGTHIPIDMFFAK 517
E + K ++ ++ TQ+ S +KRK Q+ K + ID F+ K
Sbjct: 538 DECILKVQNDDGPELICVSVENKSTQKPERPSTKKRKLQEKRPKAKKMVTIDSFWKK 594
>UNIPROTKB|D6R9M8 [details] [associations]
symbol:POLK "DNA polymerase kappa" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 EMBL:AC010245 EMBL:AC116341 GO:GO:0003887
InterPro:IPR024728 Pfam:PF11798 HOGENOM:HOG000082711 HGNC:HGNC:9183
EMBL:AC026424 IPI:IPI00967979 ProteinModelPortal:D6R9M8 SMR:D6R9M8
Ensembl:ENST00000514141 UCSC:uc003kea.3 ArrayExpress:D6R9M8
Bgee:D6R9M8 Uniprot:D6R9M8
Length = 427
Score = 340 (124.7 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 72/136 (52%), Positives = 96/136 (70%)
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTF 119
G S E+ +E+R + ++ LT SAG+APN +LAKVCSD NKPNGQ+ +LPN R AVM F
Sbjct: 287 GTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPN-RQAVMDF 345
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGS 179
I LPIRK+ GIGKVTE +L+ GI TC E+ Q+ +LL +FS ++ +FL + LGLGS
Sbjct: 346 IKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 404
Query: 180 TNTPQARFRKSISSER 195
T+ + RKS+S ER
Sbjct: 405 THLTRDGERKSMSVER 420
Score = 186 (70.5 bits), Expect = 1.8e-48, Sum P(2) = 1.8e-48
Identities = 35/60 (58%), Positives = 44/60 (73%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ YDPNFMA SLDEAYL+IT+ ER
Sbjct: 152 MPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEER 211
>ASPGD|ASPL0000039840 [details] [associations]
symbol:AN3373 species:162425 "Emericella nidulans"
[GO:0000077 "DNA damage checkpoint" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 EMBL:BN001306 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 OMA:VHVDCDA EnsemblFungi:CADANIAT00009669
HOGENOM:HOG000082709 Uniprot:C8VHQ1
Length = 612
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 108/295 (36%), Positives = 164/295 (55%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
M F+A+KLCP+LI +P ++ KYT + R + +YDP F +AS+DEAYL+IT CRE+
Sbjct: 163 MASFVAKKLCPQLICLPQNYEKYTAKAQEIRAILAQYDPQFESASIDEAYLNITAYCREK 222
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
+ E +R + E+ ++ SAG+A N +AK+CS+ NKPNGQF +PN++ A+M F+
Sbjct: 223 QLDPDEAVSRMRAEILEKTKISVSAGIAANAKIAKICSNRNKPNGQFRVPNEKNAIMEFM 282
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 180
LP+RKI G+G+V E L D GI TC ++ + + L +F F LG+G T
Sbjct: 283 RDLPMRKINGVGRVFEREL-DSIGIKTCGDIFPQRAYLAKLFGEKALHFLAQCYLGVGRT 341
Query: 181 NTPQARF--RKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXA 238
A RKS+ +ERTF + KL A+ L D+ + A
Sbjct: 342 KIQPAESYERKSVGTERTFHEISKREEFREKLWSCAQELEKDLSRTQFMGRTLVLKVKLA 401
Query: 239 SFEVRTRAVTLQKYISSSEDILKHASVLLKA---ELP-VSLRLIGLRVTQFNEDK 289
+FEV TR + +S+++D+ A +L+ E+P + LRL+G+R T K
Sbjct: 402 TFEVLTRQYQPARAVSTAKDLFTSALPMLEKLEKEIPNMKLRLLGIRCTNLVSTK 456
>POMBASE|SPCC553.07c [details] [associations]
symbol:kpa1 "DinB translesion DNA repair polymerase, pol
kappa" species:4896 "Schizosaccharomyces pombe" [GO:0000077 "DNA
damage checkpoint" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISM]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0019985 "translesion synthesis" evidence=TAS] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 PomBase:SPCC553.07c
GO:GO:0005829 GO:GO:0007126 GO:GO:0000077 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0000790 GO:GO:0003887 GO:GO:0019985 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:Q9UHC5 KO:K03511
PIR:T41397 RefSeq:NP_587767.2 ProteinModelPortal:O74944
STRING:O74944 EnsemblFungi:SPCC553.07c.1 GeneID:2539547
KEGG:spo:SPCC553.07c OMA:VHVDCDA OrthoDB:EOG441TMM NextBio:20800707
Uniprot:O74944
Length = 547
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 112/356 (31%), Positives = 187/356 (52%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP FIARK+CP+L+ +P + ++Y S + V +YD N AS+DE Y+++T R +
Sbjct: 180 MPEFIARKICPDLVVIPLNLSEYAIKSKEIQNVLAQYDSNLCPASIDEFYMNLTSHLRLQ 239
Query: 61 GIS-GIE----IAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMA 115
++ +E + E++R V+EE G+T S G+A N+LLAK+ S+ KPN QF +P D +
Sbjct: 240 ELAFTVENITMVVEKIRKQVHEETGVTVSCGIAANKLLAKIASNKRKPNNQFFIPFDEIG 299
Query: 116 VMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGL 175
+ F++ LP+R++ GIG+V E L + I TC ++ + +L +F + L
Sbjct: 300 ISKFMNDLPVREVSGIGRVLEQQLLGL-EIKTCGDIQRNLVILSYIFLPKSFQNLLRCSY 358
Query: 176 GLGSTNTPQ--ARFRKSISSERTFSVT-EDKALLYRKLAEIAEMLSADMQKEXXXXXXXX 232
G G+T + RK+I SE TFS +++ KL + + +S ++QK
Sbjct: 359 GFGTTILDEYGESKRKTIGSEATFSSNLSSPSIIEYKLRLLVQNVSENLQKRGLVTNSIA 418
Query: 233 XXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPVSLRLIGLRVTQFNEDKVRA 292
+ F+V T+ ++ ++I S D+LK A LL+ P+++RL+G+R T+ K R
Sbjct: 419 IKYKTSEFQVHTKQKSIGQFIHSESDLLKPALQLLRQSYPMTIRLLGVRATKL-VSKSRC 477
Query: 293 PSDPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLIDDKETSVSL-DVSETNN 347
+ + N + K I + L + D CL + ET SL + T N
Sbjct: 478 LAMQLKFQSQNTVPCPVCQKNIENELGILNQHV-DLCL--NVETVKSLINTDHTAN 530
>UNIPROTKB|Q83EN5 [details] [associations]
symbol:dinP "DNA polymerase IV" species:227377 "Coxiella
burnetii RSA 493" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0000287 GO:GO:0003684 GO:GO:0006281
GO:GO:0006261 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003887
HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
RefSeq:NP_819324.2 GeneID:1208161 KEGG:cbu:CBU_0280 PATRIC:17929253
ProtClustDB:CLSK913950 BioCyc:CBUR227377:GJ7S-285-MONOMER
Uniprot:Q83EN5
Length = 372
Score = 325 (119.5 bits), Expect = 5.5e-29, P = 5.5e-29
Identities = 98/290 (33%), Positives = 149/290 (51%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A+KLCP LI +P + KY R +F +Y SLDEAYLD+++ C+ S
Sbjct: 85 AKKLCPSLIILPVNMEKYRAIGHQIRGLFQEYTHLVEPLSLDEAYLDVSD-CKIHQGSAT 143
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNG-QFVLPNDRMAVMTFISSLP 124
IA+E+R + + LT SAGVA N+LLAKV S NKPNG + +LP+ F+ +LP
Sbjct: 144 RIAQEIREQIVKRHSLTASAGVASNKLLAKVASAWNKPNGIKVILPSK---ADDFVKTLP 200
Query: 125 IRKIGGIGKVTEHILRDVFGINTCEEM--LQKGSLLCAVFSHSTADFFLSVGLGLGSTNT 182
I KI G+GK+T ++ I+TC ++ L + +L + S + L G+ S
Sbjct: 201 IEKIHGVGKITAQKMK-AMNIHTCSDLQALSREALSKSFGSFGVTLYELCRGIDPRSVE- 258
Query: 183 PQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASFEV 242
P R RKS+S E TFS +D A L E+A + + D+++ +
Sbjct: 259 PN-RIRKSVSVEHTFS--QDIATLSECEIELANLFN-DLKQRLLKHTDRCIRKQFVKIKF 314
Query: 243 RTRAVTLQKYISS--SEDILKHA--SVLLKAELPVSLRLIGLRVTQFNED 288
+T + I+ S D+ KH + + + PV RL+G+ V+ F+ED
Sbjct: 315 NDFKITKAETITQTISLDLFKHLLYQIFERQQKPV--RLLGVGVS-FSED 361
>TIGR_CMR|CBU_0280 [details] [associations]
symbol:CBU_0280 "DNA-damage-inducible protein P"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003887 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
RefSeq:NP_819324.2 GeneID:1208161 KEGG:cbu:CBU_0280 PATRIC:17929253
ProtClustDB:CLSK913950 BioCyc:CBUR227377:GJ7S-285-MONOMER
Uniprot:Q83EN5
Length = 372
Score = 325 (119.5 bits), Expect = 5.5e-29, P = 5.5e-29
Identities = 98/290 (33%), Positives = 149/290 (51%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A+KLCP LI +P + KY R +F +Y SLDEAYLD+++ C+ S
Sbjct: 85 AKKLCPSLIILPVNMEKYRAIGHQIRGLFQEYTHLVEPLSLDEAYLDVSD-CKIHQGSAT 143
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNG-QFVLPNDRMAVMTFISSLP 124
IA+E+R + + LT SAGVA N+LLAKV S NKPNG + +LP+ F+ +LP
Sbjct: 144 RIAQEIREQIVKRHSLTASAGVASNKLLAKVASAWNKPNGIKVILPSK---ADDFVKTLP 200
Query: 125 IRKIGGIGKVTEHILRDVFGINTCEEM--LQKGSLLCAVFSHSTADFFLSVGLGLGSTNT 182
I KI G+GK+T ++ I+TC ++ L + +L + S + L G+ S
Sbjct: 201 IEKIHGVGKITAQKMK-AMNIHTCSDLQALSREALSKSFGSFGVTLYELCRGIDPRSVE- 258
Query: 183 PQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASFEV 242
P R RKS+S E TFS +D A L E+A + + D+++ +
Sbjct: 259 PN-RIRKSVSVEHTFS--QDIATLSECEIELANLFN-DLKQRLLKHTDRCIRKQFVKIKF 314
Query: 243 RTRAVTLQKYISS--SEDILKHA--SVLLKAELPVSLRLIGLRVTQFNED 288
+T + I+ S D+ KH + + + PV RL+G+ V+ F+ED
Sbjct: 315 NDFKITKAETITQTISLDLFKHLLYQIFERQQKPV--RLLGVGVS-FSED 361
>UNIPROTKB|Q47155 [details] [associations]
symbol:dinB species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0019985
"translesion synthesis" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0009432 "SOS response"
evidence=IEP;IDA] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 EMBL:U70214 GO:GO:0000731
GO:GO:0009432 GO:GO:0003887 EMBL:D38582 GO:GO:0019985 PDB:1OK7
PDB:1UNN PDBsum:1OK7 PDBsum:1UNN KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 EMBL:AF483080
EMBL:AF483081 EMBL:AF483082 EMBL:AF483083 EMBL:AF483084
EMBL:AF483085 EMBL:AF483086 EMBL:AF483087 EMBL:AF483088
EMBL:AF483089 EMBL:AF483090 EMBL:AF483091 EMBL:AF483092
EMBL:AF483093 EMBL:AF483094 EMBL:AF483095 EMBL:AF483096
EMBL:AF483097 EMBL:AF483098 EMBL:AF483099 EMBL:AF483100
EMBL:AF483101 EMBL:AF483102 EMBL:AF483103 EMBL:AF483104
EMBL:AF483105 PIR:H64747 RefSeq:NP_414766.1 RefSeq:YP_488526.1
ProteinModelPortal:Q47155 SMR:Q47155 IntAct:Q47155
EnsemblBacteria:EBESCT00000002588 EnsemblBacteria:EBESCT00000014477
GeneID:12932684 GeneID:944922 KEGG:ecj:Y75_p0222 KEGG:eco:b0231
PATRIC:32115577 EchoBASE:EB2935 EcoGene:EG13141 OMA:MNILNEY
ProtClustDB:PRK02406 BioCyc:EcoCyc:G6115-MONOMER
BioCyc:ECOL316407:JW0221-MONOMER BioCyc:MetaCyc:G6115-MONOMER
EvolutionaryTrace:Q47155 Genevestigator:Q47155 Uniprot:Q47155
Length = 351
Score = 323 (118.8 bits), Expect = 9.3e-29, P = 9.3e-29
Identities = 84/225 (37%), Positives = 123/225 (54%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP +A KLCP L +P F Y S+ R++F +Y SLDEAYLD+T+
Sbjct: 57 MPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCH 116
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVL-PNDRMAVMTF 119
G S IA+E+R +++ E LT SAGVAP + LAK+ SD+NKPNGQFV+ P + V F
Sbjct: 117 G-SATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAE---VPAF 172
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFL-SVGLGLG 178
+ +LP+ KI G+GKV+ L + G+ TC ++ QK L+ + L G+
Sbjct: 173 LQTLPLAKIPGVGKVSAAKL-EAMGLRTCGDV-QKCDLVMLLKRFGKFGRILWERSQGID 230
Query: 179 STNTPQARFRKSISSERTFSV-----TEDKALLYRKLAEIAEMLS 218
+ R RKS+ ERT + +E +A++ R E+ L+
Sbjct: 231 ERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLA 275
>UNIPROTKB|Q71Y46 [details] [associations]
symbol:dinB "DNA polymerase IV" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 OMA:MNILNEY ProtClustDB:PRK02406
RefSeq:YP_014591.1 ProteinModelPortal:Q71Y46 STRING:Q71Y46
GeneID:2798339 KEGG:lmf:LMOf2365_1998 PATRIC:20325291
Uniprot:Q71Y46
Length = 356
Score = 323 (118.8 bits), Expect = 9.3e-29, P = 9.3e-29
Identities = 97/291 (33%), Positives = 146/291 (50%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP A KLCP IF+ + Y S+ R++F +Y SLDEAYLD+TE ++
Sbjct: 60 MPTRQAAKLCPNGIFIHGNMAHYVEVSNQIREIFSRYTDIIEPLSLDEAYLDVTE--NKK 117
Query: 61 GI-SGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNG-QFVLPNDRMAVMT 118
G+ S +A E++ ++Y+E GLT SAGV+ N+ +AK+ SD KP G V P + A
Sbjct: 118 GMKSATMVAREIQQTIYQELGLTASAGVSFNKFIAKIASDFKKPAGITVVTPEEAEA--- 174
Query: 119 FISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGS---LLCAVFSHSTADFFLSVGL 175
F+ +P+ K G+GKVT L + GI T + L+K S L+ + H + G
Sbjct: 175 FLEQIPVTKFYGVGKVTAEKLHRL-GIETGAD-LKKWSEWDLIRELHKHGYHLYRHVRGR 232
Query: 176 GLGSTNTPQARFRKSISSERTFSVTE-DKALLYRKLAEIAEMLSADMQKEXXXXXXXXXX 234
N P R RKS+ E TF D +L + L + A+ + + K
Sbjct: 233 SNNIVN-PH-RDRKSVGKETTFEFNVLDSRVLEQSLMQFAKKVEERLIKLQKHGKTVVLK 290
Query: 235 XXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPV--SLRLIGLRVT 283
+ F T+ +TL +Y + + I + A++LL+ S+RLIGL VT
Sbjct: 291 LRYSDFTTITKRLTLNEYTNDTSQIYQAAALLLRESYTGQDSIRLIGLTVT 341
>UNIPROTKB|Q8EHU9 [details] [associations]
symbol:dinB "DNA polymerase IV" species:211586 "Shewanella
oneidensis MR-1" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003887
eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:MNILNEY
ProtClustDB:PRK02406 RefSeq:NP_716739.1 HSSP:Q9UHC5
ProteinModelPortal:Q8EHU9 GeneID:1168948 KEGG:son:SO_1114
PATRIC:23521872 Uniprot:Q8EHU9
Length = 357
Score = 320 (117.7 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 80/195 (41%), Positives = 109/195 (55%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A+KLCP+LI VP Y S R +F +Y SLDEAYLD+++ +G S
Sbjct: 62 AQKLCPDLILVPGRMQVYKDVSSQIRAIFSRYTELIEPLSLDEAYLDVSDCKLHKG-SAT 120
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
IAE +R + E GLT SAGVAP + LAKV SD+NKPNGQ+V+P D+ V FI +L +
Sbjct: 121 LIAEAIRRDILAETGLTASAGVAPVKFLAKVASDLNKPNGQYVIPPDK--VPEFIRTLSL 178
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEM--LQKGSLLCAVFSHSTADFFLSVGLGLGSTNTP 183
R+I G+GKVT L + G+NTC ++ K L+ F A + G+
Sbjct: 179 RQIPGVGKVTAEKLSSL-GLNTCGDVQTYPKQELITR-FGKFGA-VLIERAQGIDDRGLS 235
Query: 184 QARFRKSISSERTFS 198
+R RKS+ E T +
Sbjct: 236 VSRERKSVGVETTLA 250
>TIGR_CMR|SO_1114 [details] [associations]
symbol:SO_1114 "DNA-damage-inducible protein P"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 OMA:MNILNEY ProtClustDB:PRK02406
RefSeq:NP_716739.1 HSSP:Q9UHC5 ProteinModelPortal:Q8EHU9
GeneID:1168948 KEGG:son:SO_1114 PATRIC:23521872 Uniprot:Q8EHU9
Length = 357
Score = 320 (117.7 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 80/195 (41%), Positives = 109/195 (55%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A+KLCP+LI VP Y S R +F +Y SLDEAYLD+++ +G S
Sbjct: 62 AQKLCPDLILVPGRMQVYKDVSSQIRAIFSRYTELIEPLSLDEAYLDVSDCKLHKG-SAT 120
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
IAE +R + E GLT SAGVAP + LAKV SD+NKPNGQ+V+P D+ V FI +L +
Sbjct: 121 LIAEAIRRDILAETGLTASAGVAPVKFLAKVASDLNKPNGQYVIPPDK--VPEFIRTLSL 178
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEM--LQKGSLLCAVFSHSTADFFLSVGLGLGSTNTP 183
R+I G+GKVT L + G+NTC ++ K L+ F A + G+
Sbjct: 179 RQIPGVGKVTAEKLSSL-GLNTCGDVQTYPKQELITR-FGKFGA-VLIERAQGIDDRGLS 235
Query: 184 QARFRKSISSERTFS 198
+R RKS+ E T +
Sbjct: 236 VSRERKSVGVETTLA 250
>UNIPROTKB|Q74CQ6 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 HSSP:Q97W02 RefSeq:NP_952667.1
ProteinModelPortal:Q74CQ6 GeneID:2687433 KEGG:gsu:GSU1616
PATRIC:22026081 OMA:FETHTRA ProtClustDB:CLSK827609
BioCyc:GSUL243231:GH27-1576-MONOMER Uniprot:Q74CQ6
Length = 409
Score = 318 (117.0 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 88/302 (29%), Positives = 151/302 (50%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A++LCPELI V + +YT S L ++ ++ P S+DEA+LD+T R G + +
Sbjct: 64 AKRLCPELILVIGNNREYTRISKLIFEMLGQFTPLVEVFSIDEAFLDLTGSLRLFGRADV 123
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
IA E++ + + GLTCS G+APN+LLAK+ SD+ KP+G ++P + +A + + + PI
Sbjct: 124 -IAREIKARIRDRFGLTCSIGIAPNKLLAKLASDMQKPDGLTIIPPENVA--SLMKTTPI 180
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGSTN---T 182
R + GIG TE L+ GI+TC ++ S + + +G G+ + T
Sbjct: 181 RSLCGIGPSTEQRLK-YLGISTCNDLGHFSSKILTRHFGAMGARLKQMGQGIDDSPVIPT 239
Query: 183 PQARFRKSISSERTFSVT-EDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASFE 241
KS+S T +K +++ L ++EM+ ++ A F
Sbjct: 240 TTEEEVKSVSHSTTLDHDLTNKDDIHKYLLMLSEMVGRRARRYKTKGKTVTLTIRYADFT 299
Query: 242 VRTRAVTLQKYISSSEDILKHASVLLKA-ELPVSLRLIGLRVTQFNEDKVRAPSDPTQKT 300
+R TL ++ S DI + + LL +L +RL+G+ ++ + P P ++
Sbjct: 300 TFSRQETLPSPLNRSGDIYRAVTALLDTLQLTQPIRLLGVAISNLVHASEQLPLFPEERR 359
Query: 301 LT 302
LT
Sbjct: 360 LT 361
>TIGR_CMR|GSU_1616 [details] [associations]
symbol:GSU_1616 "ImpB/MucB/SamB family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 HSSP:Q97W02 RefSeq:NP_952667.1
ProteinModelPortal:Q74CQ6 GeneID:2687433 KEGG:gsu:GSU1616
PATRIC:22026081 OMA:FETHTRA ProtClustDB:CLSK827609
BioCyc:GSUL243231:GH27-1576-MONOMER Uniprot:Q74CQ6
Length = 409
Score = 318 (117.0 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 88/302 (29%), Positives = 151/302 (50%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A++LCPELI V + +YT S L ++ ++ P S+DEA+LD+T R G + +
Sbjct: 64 AKRLCPELILVIGNNREYTRISKLIFEMLGQFTPLVEVFSIDEAFLDLTGSLRLFGRADV 123
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
IA E++ + + GLTCS G+APN+LLAK+ SD+ KP+G ++P + +A + + + PI
Sbjct: 124 -IAREIKARIRDRFGLTCSIGIAPNKLLAKLASDMQKPDGLTIIPPENVA--SLMKTTPI 180
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGSTN---T 182
R + GIG TE L+ GI+TC ++ S + + +G G+ + T
Sbjct: 181 RSLCGIGPSTEQRLK-YLGISTCNDLGHFSSKILTRHFGAMGARLKQMGQGIDDSPVIPT 239
Query: 183 PQARFRKSISSERTFSVT-EDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASFE 241
KS+S T +K +++ L ++EM+ ++ A F
Sbjct: 240 TTEEEVKSVSHSTTLDHDLTNKDDIHKYLLMLSEMVGRRARRYKTKGKTVTLTIRYADFT 299
Query: 242 VRTRAVTLQKYISSSEDILKHASVLLKA-ELPVSLRLIGLRVTQFNEDKVRAPSDPTQKT 300
+R TL ++ S DI + + LL +L +RL+G+ ++ + P P ++
Sbjct: 300 TFSRQETLPSPLNRSGDIYRAVTALLDTLQLTQPIRLLGVAISNLVHASEQLPLFPEERR 359
Query: 301 LT 302
LT
Sbjct: 360 LT 361
>TIGR_CMR|CPS_1040 [details] [associations]
symbol:CPS_1040 "DNA polymerase IV" species:167879
"Colwellia psychrerythraea 34H" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR003583
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00278
GO:GO:0005737 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003887
eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 RefSeq:YP_267789.1
HSSP:Q9UNA4 ProteinModelPortal:Q487H6 STRING:Q487H6 GeneID:3521759
KEGG:cps:CPS_1040 PATRIC:21465357 OMA:QSLGMRT
BioCyc:CPSY167879:GI48-1126-MONOMER Uniprot:Q487H6
Length = 352
Score = 287 (106.1 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 77/211 (36%), Positives = 111/211 (52%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP A++LCP L V Y S R++F +Y SLDEAYLD+T+ +
Sbjct: 59 MPAIKAKQLCPHLKIVHGRMDVYKETSKNIREIFSRYTDLIEPLSLDEAYLDVTDATMCQ 118
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G S IAE +R ++ E LT SAG+APN+ LAK+ SD NKPNGQ V+ D++A F+
Sbjct: 119 G-SATLIAERIRADIFNELNLTASAGIAPNKFLAKIASDENKPNGQCVITPDKVA--NFV 175
Query: 121 SSLPIRKIGGIG-KVTEHILRDVFGINTCEEMLQKG-SLLCAVFSHSTADFFLSVGLGLG 178
L ++KI GIG K E + R G TC ++ Q L + +L G+
Sbjct: 176 EQLSLKKIPGIGPKTFEKLNRH--GYVTCADVRQSNIRALQNIVGKFANSLYLK-SHGVD 232
Query: 179 STNTPQARFRKSISSERTFS---VTEDKALL 206
+ + +R RKS++ E T + T+D+ L
Sbjct: 233 NRDLEVSRQRKSLAIETTLAHDISTQDECKL 263
Score = 39 (18.8 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 278 IGLRVTQFNEDKVRAPSDPTQKTL 301
+ L+ T FN+ V S+ Q+ L
Sbjct: 289 VKLKFTDFNQTTVETQSNECQQAL 312
>UNIPROTKB|Q3ZAI3 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 HSSP:P96022 RefSeq:YP_180766.1
ProteinModelPortal:Q3ZAI3 STRING:Q3ZAI3 GeneID:3229123
KEGG:det:DET0011 PATRIC:21607125 OMA:PDGITIL ProtClustDB:CLSK836830
BioCyc:DETH243164:GJNF-11-MONOMER Uniprot:Q3ZAI3
Length = 390
Score = 298 (110.0 bits), Expect = 6.1e-26, P = 6.1e-26
Identities = 85/305 (27%), Positives = 144/305 (47%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP A+ LCP+ +F+ + Y YS+ ++ + P LDEAYL++T
Sbjct: 59 MPLLSAKHLCPQAVFIEGNHRLYREYSEKFMQILSDFSPFLEPMGLDEAYLEVTGFESLH 118
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G G E+A ++R + E + S G+A ++++AK+ ++ KPNGQ +P A F+
Sbjct: 119 GSIG-EMALKIRRRITAELSINASIGIANSKVVAKIATERAKPNGQCEVPAGEEAA--FL 175
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 180
+ L I + GIGK TE+ L+ + GINT + + + + A + L+ G+ +
Sbjct: 176 APLDISIMPGIGKKTEYHLKSL-GINTLGRLAGIPATFLKIHLGTYAPYLLNAAAGIDNR 234
Query: 181 NTPQARFRKSISSERTFSV-TEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 239
KSIS E TF T + L KL ++E ++A ++K A
Sbjct: 235 PVEMPAEAKSISRETTFETDTRNHTFLEAKLGYLSEKIAATLRKRGKQARVVQIKIRFAD 294
Query: 240 FEVRTRAVTLQKYISSSEDILKHASVLLKAELPV---SLRLIGLRVTQFNEDKVRAPSDP 296
F TR L S +++I + A L+ L S+RL+G+ ++ F + + DP
Sbjct: 295 FTTLTRQKHLNHPCSGNQEIFQTALKLMNGILDSDRRSVRLLGVGISDFCGPEKQLEIDP 354
Query: 297 TQKTL 301
+ L
Sbjct: 355 ARARL 359
>TIGR_CMR|DET_0011 [details] [associations]
symbol:DET_0011 "DNA polymerase IV, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0006281
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0003887
eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 HSSP:P96022
RefSeq:YP_180766.1 ProteinModelPortal:Q3ZAI3 STRING:Q3ZAI3
GeneID:3229123 KEGG:det:DET0011 PATRIC:21607125 OMA:PDGITIL
ProtClustDB:CLSK836830 BioCyc:DETH243164:GJNF-11-MONOMER
Uniprot:Q3ZAI3
Length = 390
Score = 298 (110.0 bits), Expect = 6.1e-26, P = 6.1e-26
Identities = 85/305 (27%), Positives = 144/305 (47%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP A+ LCP+ +F+ + Y YS+ ++ + P LDEAYL++T
Sbjct: 59 MPLLSAKHLCPQAVFIEGNHRLYREYSEKFMQILSDFSPFLEPMGLDEAYLEVTGFESLH 118
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G G E+A ++R + E + S G+A ++++AK+ ++ KPNGQ +P A F+
Sbjct: 119 GSIG-EMALKIRRRITAELSINASIGIANSKVVAKIATERAKPNGQCEVPAGEEAA--FL 175
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGST 180
+ L I + GIGK TE+ L+ + GINT + + + + A + L+ G+ +
Sbjct: 176 APLDISIMPGIGKKTEYHLKSL-GINTLGRLAGIPATFLKIHLGTYAPYLLNAAAGIDNR 234
Query: 181 NTPQARFRKSISSERTFSV-TEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 239
KSIS E TF T + L KL ++E ++A ++K A
Sbjct: 235 PVEMPAEAKSISRETTFETDTRNHTFLEAKLGYLSEKIAATLRKRGKQARVVQIKIRFAD 294
Query: 240 FEVRTRAVTLQKYISSSEDILKHASVLLKAELPV---SLRLIGLRVTQFNEDKVRAPSDP 296
F TR L S +++I + A L+ L S+RL+G+ ++ F + + DP
Sbjct: 295 FTTLTRQKHLNHPCSGNQEIFQTALKLMNGILDSDRRSVRLLGVGISDFCGPEKQLEIDP 354
Query: 297 TQKTL 301
+ L
Sbjct: 355 ARARL 359
>DICTYBASE|DDB_G0287149 [details] [associations]
symbol:DDB_G0287149 "UMUC-like DNA-repair protein"
species:44689 "Dictyostelium discoideum" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 dictyBase:DDB_G0287149
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389
EMBL:AAFI02000098 KO:K03511 RefSeq:XP_637357.1
ProteinModelPortal:Q54KS3 EnsemblProtists:DDB0304434 GeneID:8625979
KEGG:ddi:DDB_G0287149 InParanoid:Q54KS3 OMA:YANVEEM Uniprot:Q54KS3
Length = 517
Score = 308 (113.5 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 58/154 (37%), Positives = 101/154 (65%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
+PG +A KLCP LI +P+ +Y S + R + K+D N+++ SLDE +DITE ++
Sbjct: 132 LPGLLAMKLCPHLIILPSRMDRYREVSLIIRNILYKFDKNYVSPSLDEGCIDITEYLKDN 191
Query: 61 -GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTF 119
++GI++A +L+ ++E+ LTCS G++ + LL+K+ S+INKPNG F L D+ F
Sbjct: 192 ENLTGIDVANQLQNDIFEKTTLTCSMGISCSPLLSKISSEINKPNGYFYL--DKQYSQEF 249
Query: 120 ISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQ 153
I ++ I+K+ GIGKV + +L+ + G+ ++++
Sbjct: 250 IKTIQIKKLPGIGKVRQELLKTL-GLEFVSDIIE 282
>TIGR_CMR|CHY_1651 [details] [associations]
symbol:CHY_1651 "DNA polymerase IV - AMBIGUITY"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 HOGENOM:HOG000082710 RefSeq:YP_360472.1
HSSP:P96022 ProteinModelPortal:Q3ABL2 STRING:Q3ABL2 GeneID:3726655
KEGG:chy:CHY_1651 PATRIC:21276423 OMA:GNREIFQ
ProtClustDB:CLSK2464724 BioCyc:CHYD246194:GJCN-1650-MONOMER
Uniprot:Q3ABL2
Length = 391
Score = 280 (103.6 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 86/285 (30%), Positives = 138/285 (48%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A +LCP IF+P + KY S+ ++F +Y P SLDEAYLD+T + G G
Sbjct: 64 AARLCPHGIFIPGNHKKYQEVSEKIFRIFREYTPLVEPVSLDEAYLDVTGSQKLFG-PGA 122
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
EI ++++ ++EE LT S GVAPN+ LAK+ S++NKP+G + D V+ F++ LP+
Sbjct: 123 EIGKKIKKRIFEETELTASVGVAPNKFLAKLASEVNKPDGFCEVREDN--VLDFLAPLPV 180
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEMLQKGSL-LCAVFSHSTAD-FFLSVGLGLGSTNTP 183
+ G+G+ + L D+ GI T ++ + L F + ++LS G+ P
Sbjct: 181 EMLWGVGEKMKERLNDM-GIKTVQDFWELPEFFLRKKFGVLGQNLYYLSRGIDFREV-IP 238
Query: 184 QARFRKSISSERTFSV-TEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXASFEV 242
+ R KS+ E T + D L KL + + +++E +SF
Sbjct: 239 E-RVPKSLGKEITLQKDSSDVDYLLGKLLGLTMAVGRGLRREGFYAGGISVKIRLSSFIT 297
Query: 243 RTRAVTLQKYISSSEDILKHASVLL----KAELPVSLRLIGLRVT 283
TR + + + + A L ELPV RL+G+ T
Sbjct: 298 YTRHSRFFEPTWMDDVLYREAKRLFLENYHGELPV--RLVGVTAT 340
>UNIPROTKB|Q9KPS5 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_01113 InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 InterPro:IPR022880
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0003887
eggNOG:COG0389 KO:K02346 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 OMA:QSLGMRT ProtClustDB:PRK02406
PIR:G82093 RefSeq:NP_231918.1 ProteinModelPortal:Q9KPS5
DNASU:2613209 GeneID:2613209 KEGG:vch:VC2287 PATRIC:20083613
Uniprot:Q9KPS5
Length = 360
Score = 270 (100.1 bits), Expect = 7.7e-23, P = 7.7e-23
Identities = 73/199 (36%), Positives = 103/199 (51%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP A KLCP+L VP + Y S + +F +Y SLDEAYLD++E +
Sbjct: 61 MPTAQALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQ 120
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G S IA+ +R +++E LT SAGVAP + LAKV SD+NKP+G +V+ D++ M +
Sbjct: 121 G-SATLIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEM--V 177
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKG-SLLCAVFSHSTADFFLSVGLGLGS 179
SLP+ KI G+GKV L G+ ++ + L F A + G+
Sbjct: 178 DSLPLEKIPGVGKVALEKLHQA-GLYVGADVRRADYRKLLHQFGRLGASLWKK-SHGIDE 235
Query: 180 TNTPQARFRKSISSERTFS 198
R RKS+ E TFS
Sbjct: 236 REVVTERERKSVGVEYTFS 254
>TIGR_CMR|VC_2287 [details] [associations]
symbol:VC_2287 "DNA-damage-inducible protein P" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281
GO:GO:0003887 eggNOG:COG0389 KO:K02346 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 OMA:QSLGMRT
ProtClustDB:PRK02406 PIR:G82093 RefSeq:NP_231918.1
ProteinModelPortal:Q9KPS5 DNASU:2613209 GeneID:2613209
KEGG:vch:VC2287 PATRIC:20083613 Uniprot:Q9KPS5
Length = 360
Score = 270 (100.1 bits), Expect = 7.7e-23, P = 7.7e-23
Identities = 73/199 (36%), Positives = 103/199 (51%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP A KLCP+L VP + Y S + +F +Y SLDEAYLD++E +
Sbjct: 61 MPTAQALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQ 120
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G S IA+ +R +++E LT SAGVAP + LAKV SD+NKP+G +V+ D++ M +
Sbjct: 121 G-SATLIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEM--V 177
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKG-SLLCAVFSHSTADFFLSVGLGLGS 179
SLP+ KI G+GKV L G+ ++ + L F A + G+
Sbjct: 178 DSLPLEKIPGVGKVALEKLHQA-GLYVGADVRRADYRKLLHQFGRLGASLWKK-SHGIDE 235
Query: 180 TNTPQARFRKSISSERTFS 198
R RKS+ E TFS
Sbjct: 236 REVVTERERKSVGVEYTFS 254
>UNIPROTKB|Q81M86 [details] [associations]
symbol:dinB "DNA polymerase IV" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:NP_846596.1 RefSeq:YP_021011.1
RefSeq:YP_030301.1 ProteinModelPortal:Q81M86
EnsemblBacteria:EBBACT00000012953 EnsemblBacteria:EBBACT00000016454
EnsemblBacteria:EBBACT00000021276 GeneID:1087598 GeneID:2818956
GeneID:2848139 KEGG:ban:BA_4366 KEGG:bar:GBAA_4366 KEGG:bat:BAS4051
HOGENOM:HOG000082710 OMA:GDQIRRI ProtClustDB:PRK01810
BioCyc:BANT260799:GJAJ-4108-MONOMER
BioCyc:BANT261594:GJ7F-4248-MONOMER InterPro:IPR025188 Pfam:PF13438
Uniprot:Q81M86
Length = 412
Score = 271 (100.5 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 92/290 (31%), Positives = 138/290 (47%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP + A++LCP+LI +FT Y S ++ ++ S+DE YLDIT+ C
Sbjct: 66 MPLWEAKRLCPQLIVRRPNFTLYREASFQMFQILSRFTEKIQPVSIDEGYLDITD-CYAL 124
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G S +EIA+ ++ ++ E L CS G+APN LAK SD+ KP G VL + M I
Sbjct: 125 G-SPLEIAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMKKPLGITVLRKRDIPEM--I 181
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGS--LLCAVFSHSTADFFLSV-GLGL 177
LP+ + GIG+ T L D+ I T E+ L KG+ ++ A D G+
Sbjct: 182 WPLPVGAMHGIGEKTAEKLNDIH-IQTIEQ-LAKGNEHIIRAKIGKHGVDLQRRAKGMDD 239
Query: 178 GSTNTPQARFRKSISSERTFS--VTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXX 235
+ Q KS+ + TFS + E+K LL L +++ +S +QK
Sbjct: 240 REVDPSQMGQHKSVGNSMTFSKDMDEEKELL-DMLQRLSKSVSKRLQKRTLVSYNIQIMI 298
Query: 236 XXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPV-SLRLIGLRVTQ 284
TR+ L+ I DI + AS L K S+RL+G+ T+
Sbjct: 299 KYHDRRTVTRSKQLKNAIWEERDIFQAASRLWKQHWDGDSVRLLGVTATE 348
>TIGR_CMR|BA_4366 [details] [associations]
symbol:BA_4366 "DNA-damage-inducible protein P, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0046872 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:NP_846596.1 RefSeq:YP_021011.1
RefSeq:YP_030301.1 ProteinModelPortal:Q81M86
EnsemblBacteria:EBBACT00000012953 EnsemblBacteria:EBBACT00000016454
EnsemblBacteria:EBBACT00000021276 GeneID:1087598 GeneID:2818956
GeneID:2848139 KEGG:ban:BA_4366 KEGG:bar:GBAA_4366 KEGG:bat:BAS4051
HOGENOM:HOG000082710 OMA:GDQIRRI ProtClustDB:PRK01810
BioCyc:BANT260799:GJAJ-4108-MONOMER
BioCyc:BANT261594:GJ7F-4248-MONOMER InterPro:IPR025188 Pfam:PF13438
Uniprot:Q81M86
Length = 412
Score = 271 (100.5 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 92/290 (31%), Positives = 138/290 (47%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP + A++LCP+LI +FT Y S ++ ++ S+DE YLDIT+ C
Sbjct: 66 MPLWEAKRLCPQLIVRRPNFTLYREASFQMFQILSRFTEKIQPVSIDEGYLDITD-CYAL 124
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G S +EIA+ ++ ++ E L CS G+APN LAK SD+ KP G VL + M I
Sbjct: 125 G-SPLEIAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMKKPLGITVLRKRDIPEM--I 181
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGS--LLCAVFSHSTADFFLSV-GLGL 177
LP+ + GIG+ T L D+ I T E+ L KG+ ++ A D G+
Sbjct: 182 WPLPVGAMHGIGEKTAEKLNDIH-IQTIEQ-LAKGNEHIIRAKIGKHGVDLQRRAKGMDD 239
Query: 178 GSTNTPQARFRKSISSERTFS--VTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXX 235
+ Q KS+ + TFS + E+K LL L +++ +S +QK
Sbjct: 240 REVDPSQMGQHKSVGNSMTFSKDMDEEKELL-DMLQRLSKSVSKRLQKRTLVSYNIQIMI 298
Query: 236 XXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPV-SLRLIGLRVTQ 284
TR+ L+ I DI + AS L K S+RL+G+ T+
Sbjct: 299 KYHDRRTVTRSKQLKNAIWEERDIFQAASRLWKQHWDGDSVRLLGVTATE 348
>UNIPROTKB|Q74H50 [details] [associations]
symbol:dinB "DNA polymerase IV" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HOGENOM:HOG000082710 HSSP:P96022 ProtClustDB:CLSK827609
RefSeq:NP_951105.1 ProteinModelPortal:Q74H50 GeneID:2688550
KEGG:gsu:GSU0043 PATRIC:22022827 OMA:ANRIILH
BioCyc:GSUL243231:GH27-86-MONOMER Uniprot:Q74H50
Length = 413
Score = 270 (100.1 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 89/296 (30%), Positives = 141/296 (47%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A + CP LI V D KYT+ S ++F + P S+DEA+LD+T G S
Sbjct: 67 ALQACPHLILVVGDNRKYTHTSTQINRIFRDFTPEVETFSIDEAFLDVTGSLALFG-SAE 125
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVL-PNDRMAVMTFISSLP 124
IA ++ + GLTCS G+APN+LLAK+ SD+ KP+G ++ P + +M I P
Sbjct: 126 TIACRIKALIRHRFGLTCSIGIAPNKLLAKLASDMKKPDGLTIIRPEEVTRLMEII---P 182
Query: 125 IRKIGGIGKVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLG-STNT 182
I+ + GIG T L + GI TC E+ + +L F D +G G+ S
Sbjct: 183 IQDLCGIGVKTRKQLNSL-GIQTCGELGRFPVEILRRTFG-VIGDRLHLMGKGIDDSPVV 240
Query: 183 P--QARFRKSISSERTFS--VTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXA 238
P +A KS+ T +T + +L + L +++EM+ ++ A
Sbjct: 241 PVEEAEEVKSVGHSMTLDRDLTARRDIL-KYLLQLSEMVGRRARRYGVAGKTVHLTIRYA 299
Query: 239 SFEVRTRAVTLQKYISSSEDILKHASVLLKA-ELPVSLRLIGLRVTQFNEDKVRAP 293
F + T + +S+E+I A +L EL +RL+G+R+T + + P
Sbjct: 300 DFTTVGKQQTRNQATNSTEEIYAEAVKILDTFELLQPVRLLGVRITNLCYQREQLP 355
>TIGR_CMR|GSU_0043 [details] [associations]
symbol:GSU_0043 "ImpB/MucB/SamB family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006261 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003887 KO:K02346 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HOGENOM:HOG000082710 HSSP:P96022 ProtClustDB:CLSK827609
RefSeq:NP_951105.1 ProteinModelPortal:Q74H50 GeneID:2688550
KEGG:gsu:GSU0043 PATRIC:22022827 OMA:ANRIILH
BioCyc:GSUL243231:GH27-86-MONOMER Uniprot:Q74H50
Length = 413
Score = 270 (100.1 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 89/296 (30%), Positives = 141/296 (47%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A + CP LI V D KYT+ S ++F + P S+DEA+LD+T G S
Sbjct: 67 ALQACPHLILVVGDNRKYTHTSTQINRIFRDFTPEVETFSIDEAFLDVTGSLALFG-SAE 125
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVL-PNDRMAVMTFISSLP 124
IA ++ + GLTCS G+APN+LLAK+ SD+ KP+G ++ P + +M I P
Sbjct: 126 TIACRIKALIRHRFGLTCSIGIAPNKLLAKLASDMKKPDGLTIIRPEEVTRLMEII---P 182
Query: 125 IRKIGGIGKVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLG-STNT 182
I+ + GIG T L + GI TC E+ + +L F D +G G+ S
Sbjct: 183 IQDLCGIGVKTRKQLNSL-GIQTCGELGRFPVEILRRTFG-VIGDRLHLMGKGIDDSPVV 240
Query: 183 P--QARFRKSISSERTFS--VTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXA 238
P +A KS+ T +T + +L + L +++EM+ ++ A
Sbjct: 241 PVEEAEEVKSVGHSMTLDRDLTARRDIL-KYLLQLSEMVGRRARRYGVAGKTVHLTIRYA 299
Query: 239 SFEVRTRAVTLQKYISSSEDILKHASVLLKA-ELPVSLRLIGLRVTQFNEDKVRAP 293
F + T + +S+E+I A +L EL +RL+G+R+T + + P
Sbjct: 300 DFTTVGKQQTRNQATNSTEEIYAEAVKILDTFELLQPVRLLGVRITNLCYQREQLP 355
>UNIPROTKB|Q0BZW2 [details] [associations]
symbol:dinB "DNA polymerase IV" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005737 GO:GO:0000287 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 GO:GO:0006261 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0003887 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 RefSeq:YP_760981.1 ProteinModelPortal:Q0BZW2
STRING:Q0BZW2 GeneID:4289730 KEGG:hne:HNE_2286 PATRIC:32217415
OMA:PALCRDC ProtClustDB:PRK02794
BioCyc:HNEP228405:GI69-2308-MONOMER Uniprot:Q0BZW2
Length = 424
Score = 260 (96.6 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 85/294 (28%), Positives = 134/294 (45%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP F A K CP+ + VP DF KY + R P S+DEAYLD++ R
Sbjct: 89 MPMFKALKACPDAVVVPPDFRKYREAAKAIRAEMDHLTPLVQQVSIDEAYLDLSGTDRLH 148
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNG-QFVLPNDRMAVMTF 119
G L +V E G+T S G++ N+ LAK S+++KP G + P + A F
Sbjct: 149 GAPPAASLARLAKNVEREVGVTVSVGLSSNKFLAKTASELDKPRGFAIIAPEEAEA---F 205
Query: 120 ISSLPIRKIGGIG-KVTEHILRDVFGINTCEEMLQKGSLLCAVFSHS-TADFFLSVGLGL 177
++ P+ + G+G K E + +D G T E+ +QK L + + T D+ G
Sbjct: 206 LAPHPVGFLHGVGPKFAESLNKD--GFYTIED-IQKADLKSLIRRYGETGDWLKRCAHGR 262
Query: 178 GSTNTPQARFRKSISSERTF-SVTEDKALLYRKLAEIAEMLSADMQK-EXXXXXXXXXXX 235
+ RKS+SSE TF T D +L L ++ + +AD K E
Sbjct: 263 DNRKVNPHEDRKSVSSETTFFEDTADIGILEDHLWRLS-VKTADRAKAEGVSGRVVTLKL 321
Query: 236 XXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELP--VSLRLIGLRVTQFNE 287
+ F TR ++L + ++ + + + LL E V RLIG+ ++ ++
Sbjct: 322 KTSDFHPLTRRLSLTEPTQLAQVVFRASRPLLLKEATGRVKYRLIGVGLSDLSD 375
>FB|FBgn0035150 [details] [associations]
symbol:Rev1 "Rev1" species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0017125 "deoxycytidyl
transferase activity" evidence=ISS;NAS] [GO:0019985 "translesion
synthesis" evidence=NAS] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IMP] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 EMBL:AE014296 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0010569 GO:GO:0003887 GO:GO:0019985 Gene3D:3.30.1490.100
SUPFAM:SSF100879 GO:GO:0017125 GeneTree:ENSGT00530000062942
KO:K03515 OMA:TIPYDFD CTD:51455 FlyBase:FBgn0035150 EMBL:AB049435
RefSeq:NP_612047.1 UniGene:Dm.2203 SMR:Q9W0P2 IntAct:Q9W0P2
STRING:Q9W0P2 EnsemblMetazoa:FBtr0072557 GeneID:38079
KEGG:dme:Dmel_CG12189 UCSC:CG12189-RA InParanoid:Q9W0P2
GenomeRNAi:38079 NextBio:806885 Uniprot:Q9W0P2
Length = 995
Score = 242 (90.2 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 57/196 (29%), Positives = 96/196 (48%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A KLCPEL +P DF Y + +Y N A S DE ++++T++ E + +
Sbjct: 380 ALKLCPELKTIPYDFEGYKEVAFTLYDTVAQYTLNIEAVSCDEMFVELTDLAHELNVDVM 439
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
LR VY + G CSAGVA N+LLA++ + KPNGQF+L + ++ +++ + +
Sbjct: 440 AFVSHLRQEVYSKTGCPCSAGVAGNKLLARMATKEAKPNGQFLLDSSN-DILAYMAPMSL 498
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEMLQKGSL--LCAVFSHSTADFFLSVGLGLGSTNTP 183
+ G+G H L+ G+N C ++ Q +L + V G+
Sbjct: 499 DLLPGVGSSISHKLKQA-GLNNCGDV-QNTTLEKMEKVLGKKLGQNLFQNCRGIDDRPLA 556
Query: 184 QARFRKSISSERTFSV 199
+ RK++S+E F +
Sbjct: 557 YEQIRKTVSAEMNFGI 572
>ZFIN|ZDB-GENE-081105-180 [details] [associations]
symbol:si:dkey-57a22.7 "si:dkey-57a22.7"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 ZFIN:ZDB-GENE-081105-180
GO:GO:0000287 GO:GO:0003684 GO:GO:0006281 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 KO:K03515
HOGENOM:HOG000154094 HOVERGEN:HBG054140 EMBL:CR392332 EMBL:CR536604
IPI:IPI00862463 RefSeq:NP_001116772.1 UniGene:Dr.61598 SMR:B0UY97
Ensembl:ENSDART00000134915 GeneID:570043 KEGG:dre:570043
NextBio:20889959 Uniprot:B0UY97
Length = 1268
Score = 237 (88.5 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 60/195 (30%), Positives = 97/195 (49%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A++LCP+L VP DF Y + ++ Y N A S DEA +D T + E G+S
Sbjct: 568 AKQLCPDLQSVPYDFHAYKEVALAMYEILASYTHNIEALSCDEALVDATALLVELGVSPD 627
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
E+A +R + E+ G S G++ N LLA++ + KP GQ++L ++ V FI P+
Sbjct: 628 ELARSIREDIKEKTGCCASVGMSSNILLARMATRKAKPKGQYLLRSEE--VDDFIRDQPV 685
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEMLQKG-SLLCAVFSHSTADFFLSVGLGLGSTNTPQ 184
+ G+G+ L + G++TC ++ Q S L F T GL
Sbjct: 686 SSLPGVGRSMSSKLTSL-GVSTCGDLQQLSLSQLQREFGPRTGQTLFRFCRGLDDRPVRS 744
Query: 185 ARFRKSISSERTFSV 199
+ RKS+S+E +++
Sbjct: 745 EKERKSVSAEMNYNI 759
>UNIPROTKB|E2RC81 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0006301 "postreplication repair" evidence=IEA] [GO:0006290
"pyrimidine dimer repair" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005634 GO:GO:0005737 GO:GO:0003684
GO:GO:0010225 GO:GO:0000731 GO:GO:0006301 GO:GO:0003887
GO:GO:0006290 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 OMA:SPPLTML InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:AAEX03008345 RefSeq:XP_532150.2
Ensembl:ENSCAFT00000003028 GeneID:474915 KEGG:cfa:474915
NextBio:20850851 Uniprot:E2RC81
Length = 712
Score = 151 (58.2 bits), Expect = 4.8e-15, Sum P(3) = 4.8e-15
Identities = 71/298 (23%), Positives = 131/298 (43%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G I EE+R ++ E G CSAG++ N++LAK+ +NKPN Q ++ + +V S +
Sbjct: 193 GAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFSQM 250
Query: 124 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 181
PI KI +G K+ ++ ++ G+ E+ Q S L + F + ++ G+
Sbjct: 251 PISKIRSLGGKLGASVI-EILGVEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDP 309
Query: 182 TPQARFRKSISSERTFS-----VTEDKALLYR-KLA-EIAEMLSADMQKEXXXXXXXXXX 234
+ K+I + F T ++ + +LA E+ E L+ D + +
Sbjct: 310 VKPRQLPKTIGCSKNFPGKTALTTREQVQWWLLQLAQELEERLTKD-RNDNDRVATQLAV 368
Query: 235 XXXASFEVRT----RAVTLQKYISS--SED---ILKHASVL-LKAELPVSLRLIGLRVTQ 284
+ R R L +Y + S D ++K+ + +K + L ++ L T+
Sbjct: 369 SIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFAVIKNCNTSGIKTDWSPPLTMLFLCATK 428
Query: 285 FNEDKVRAPSDPTQKTLTNFMTSGHASKKIVGDQNSLGSDINDDCLID-DKETSVSLD 341
F+ APS T +T F++S +S V +S D + K+ + SL+
Sbjct: 429 FSAP---APSSCTD--ITTFLSSDPSSVTNVPVSSSEAKTQGCDLAVTATKKATTSLE 481
Score = 84 (34.6 bits), Expect = 4.8e-15, Sum P(3) = 4.8e-15
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 6 ARKLCPELIFVPT-------DFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCR 58
A+KLCP+L+ + TKY S + ++ AS+DEAY+D+T +
Sbjct: 68 AKKLCPDLLLAQVRESRGKANLTKYREASVEVMGILSRFAV-IERASIDEAYIDLTSAVQ 126
Query: 59 ER--GISGIEIAEELRTSVYEEAGL 81
ER + G I+ +L + Y E GL
Sbjct: 127 ERLQNLQGQPISADLLPTTYIE-GL 150
Score = 80 (33.2 bits), Expect = 4.8e-15, Sum P(3) = 4.8e-15
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 433 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK---EESGSDLRILTHRERCVRTQRDH 489
D C CG+ +P + E EH+D+H A LQK + S ++++ + R +
Sbjct: 631 DQVPCEKCGSLVP---VWEMPEHTDYHFALELQKSFLQPHSSTMQVVPASSQSKRNPKSP 687
Query: 490 IASHRKRKK 498
AS+ KR +
Sbjct: 688 SASNSKRTR 696
>UNIPROTKB|B4DG64 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0006301
GO:GO:0003887 GO:GO:0006290 Gene3D:3.30.1490.100 SUPFAM:SSF100879
EMBL:AL353602 EMBL:AL355802 UniGene:Hs.655467 HGNC:HGNC:9181
HOVERGEN:HBG053633 InterPro:IPR017061 PIRSF:PIRSF036603
EMBL:AK294430 IPI:IPI00646080 SMR:B4DG64 STRING:B4DG64
Ensembl:ENST00000535400 Uniprot:B4DG64
Length = 651
Score = 159 (61.0 bits), Expect = 9.0e-15, Sum P(3) = 9.0e-15
Identities = 67/267 (25%), Positives = 122/267 (45%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G I EE+R ++ E G CSAG++ N++LAK+ +NKPN Q ++ + +V S +
Sbjct: 131 GAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFSQM 188
Query: 124 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 181
PIRKI +G K+ ++ ++ GI E+ Q S L + F + ++ G+
Sbjct: 189 PIRKIRSLGGKLGASVI-EILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDP 247
Query: 182 TPQARFRKSISSERTFS-----VTEDKALLYR-KLA-EIAEMLSADMQKEXXXXXXXXXX 234
+ K+I + F T ++ + +LA E+ E L+ D + +
Sbjct: 248 VKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKD-RNDNDRVATQLVV 306
Query: 235 XXXASFEVRT----RAVTLQKYISS--SED---ILKHASVL-LKAELPVSLRLIGLRVTQ 284
+ R R L +Y + S D ++K+ + ++ E L ++ L T+
Sbjct: 307 SIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATK 366
Query: 285 FNEDKVRAPSDPTQKTLTNFMTSGHAS 311
F+ APS T +T+F++S +S
Sbjct: 367 FSAS---APSSSTD--ITSFLSSDPSS 388
Score = 87 (35.7 bits), Expect = 9.0e-15, Sum P(3) = 9.0e-15
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 6 ARKLCPELIFVPT-------DFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCR 58
A+KLCP+L+ + TKY S ++ ++ AS+DEAY+D+T +
Sbjct: 6 AKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAV-IERASIDEAYVDLTSAVQ 64
Query: 59 ER--GISGIEIAEELRTSVYEEAGL 81
ER + G I+ +L S Y E GL
Sbjct: 65 ERLQKLQGQPISADLLPSTYIE-GL 88
Score = 64 (27.6 bits), Expect = 9.0e-15, Sum P(3) = 9.0e-15
Identities = 27/100 (27%), Positives = 41/100 (41%)
Query: 367 CSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGSCCDGVEEVDKDITPDNKVGTSSNQK 426
C +K+ E K E+ L NS + S V EV + TP+ + + +Q
Sbjct: 516 CEGVSKLEESSKATPAEMD--LAHNSQSMHASSAS--KSVLEVTQKATPNPSLLAAEDQ- 570
Query: 427 DQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 466
C CG+ +P + + EH D+H A LQK
Sbjct: 571 --------VPCEKCGSLVP---VWDMPEHMDYHFALELQK 599
>UNIPROTKB|Q9Y253 [details] [associations]
symbol:POLH "DNA polymerase eta" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006290 "pyrimidine dimer repair"
evidence=IEA] [GO:0006301 "postreplication repair" evidence=IEA]
[GO:0000731 "DNA synthesis involved in DNA repair" evidence=IDA]
[GO:0010225 "response to UV-C" evidence=IDA] [GO:0006282
"regulation of DNA repair" evidence=TAS] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_216
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005737
GO:GO:0005654 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0010225 GO:GO:0000731 GO:GO:0006301 GO:GO:0006282
GO:GO:0003887 GO:GO:0006290 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 CleanEx:HS_POLH KO:K03509 EMBL:AL353602
EMBL:AB024313 EMBL:AF158185 EMBL:AB038008 EMBL:AY388614
EMBL:AL355802 EMBL:BC015742 IPI:IPI00008011 IPI:IPI00552037
RefSeq:NP_006493.1 UniGene:Hs.655467 PDB:2I5O PDB:2LSK PDB:3MR2
PDB:3MR3 PDB:3MR5 PDB:3MR6 PDB:3SI8 PDB:3TQ1 PDB:4DL2 PDB:4DL3
PDB:4DL4 PDB:4DL5 PDB:4DL6 PDB:4DL7 PDB:4ECQ PDB:4ECR PDB:4ECS
PDB:4ECT PDB:4ECU PDB:4ECV PDB:4ECW PDB:4ECX PDB:4ECY PDB:4ECZ
PDB:4ED0 PDB:4ED1 PDB:4ED2 PDB:4ED3 PDB:4ED6 PDB:4ED7 PDB:4ED8
PDB:4EEY PDBsum:2I5O PDBsum:2LSK PDBsum:3MR2 PDBsum:3MR3
PDBsum:3MR5 PDBsum:3MR6 PDBsum:3SI8 PDBsum:3TQ1 PDBsum:4DL2
PDBsum:4DL3 PDBsum:4DL4 PDBsum:4DL5 PDBsum:4DL6 PDBsum:4DL7
PDBsum:4ECQ PDBsum:4ECR PDBsum:4ECS PDBsum:4ECT PDBsum:4ECU
PDBsum:4ECV PDBsum:4ECW PDBsum:4ECX PDBsum:4ECY PDBsum:4ECZ
PDBsum:4ED0 PDBsum:4ED1 PDBsum:4ED2 PDBsum:4ED3 PDBsum:4ED6
PDBsum:4ED7 PDBsum:4ED8 PDBsum:4EEY ProteinModelPortal:Q9Y253
SMR:Q9Y253 IntAct:Q9Y253 MINT:MINT-2789553 STRING:Q9Y253
PhosphoSite:Q9Y253 DMDM:59798441 PRIDE:Q9Y253
Ensembl:ENST00000372226 Ensembl:ENST00000372236 GeneID:5429
KEGG:hsa:5429 UCSC:uc003ovq.4 CTD:5429 GeneCards:GC06P043543
HGNC:HGNC:9181 HPA:HPA006721 HPA:HPA026762 MIM:278750 MIM:603968
neXtProt:NX_Q9Y253 Orphanet:90342 PharmGKB:PA279
HOGENOM:HOG000115605 HOVERGEN:HBG053633 InParanoid:Q9Y253
OMA:SPPLTML OrthoDB:EOG4RBQJ8 PhylomeDB:Q9Y253 SABIO-RK:Q9Y253
BindingDB:Q9Y253 ChEMBL:CHEMBL5542 EvolutionaryTrace:Q9Y253
GenomeRNAi:5429 NextBio:21005 ArrayExpress:Q9Y253 Bgee:Q9Y253
Genevestigator:Q9Y253 GermOnline:ENSG00000170734 InterPro:IPR017061
PIRSF:PIRSF036603 Uniprot:Q9Y253
Length = 713
Score = 159 (61.0 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 67/267 (25%), Positives = 122/267 (45%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G I EE+R ++ E G CSAG++ N++LAK+ +NKPN Q ++ + +V S +
Sbjct: 193 GAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFSQM 250
Query: 124 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 181
PIRKI +G K+ ++ ++ GI E+ Q S L + F + ++ G+
Sbjct: 251 PIRKIRSLGGKLGASVI-EILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDP 309
Query: 182 TPQARFRKSISSERTFS-----VTEDKALLYR-KLA-EIAEMLSADMQKEXXXXXXXXXX 234
+ K+I + F T ++ + +LA E+ E L+ D + +
Sbjct: 310 VKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKD-RNDNDRVATQLVV 368
Query: 235 XXXASFEVRT----RAVTLQKYISS--SED---ILKHASVL-LKAELPVSLRLIGLRVTQ 284
+ R R L +Y + S D ++K+ + ++ E L ++ L T+
Sbjct: 369 SIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATK 428
Query: 285 FNEDKVRAPSDPTQKTLTNFMTSGHAS 311
F+ APS T +T+F++S +S
Sbjct: 429 FSAS---APSSSTD--ITSFLSSDPSS 450
Score = 87 (35.7 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 6 ARKLCPELIFVPT-------DFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCR 58
A+KLCP+L+ + TKY S ++ ++ AS+DEAY+D+T +
Sbjct: 68 AKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAV-IERASIDEAYVDLTSAVQ 126
Query: 59 ER--GISGIEIAEELRTSVYEEAGL 81
ER + G I+ +L S Y E GL
Sbjct: 127 ERLQKLQGQPISADLLPSTYIE-GL 150
Score = 64 (27.6 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 27/100 (27%), Positives = 41/100 (41%)
Query: 367 CSFSNKISEVEKIHENEVSQLLEGNSLVLRQEEGSCCDGVEEVDKDITPDNKVGTSSNQK 426
C +K+ E K E+ L NS + S V EV + TP+ + + +Q
Sbjct: 578 CEGVSKLEESSKATPAEMD--LAHNSQSMHASSAS--KSVLEVTQKATPNPSLLAAEDQ- 632
Query: 427 DQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 466
C CG+ +P + + EH D+H A LQK
Sbjct: 633 --------VPCEKCGSLVP---VWDMPEHMDYHFALELQK 661
>UNIPROTKB|E2RPL9 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 KO:K03515 CTD:51455
OMA:YRFCRGL EMBL:AAEX03007444 RefSeq:XP_538458.3
Ensembl:ENSCAFT00000003562 GeneID:481337 KEGG:cfa:481337
Uniprot:E2RPL9
Length = 1253
Score = 221 (82.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 88/323 (27%), Positives = 135/323 (41%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A++LCP L VP DF Y + + Y N A S DEA +DITE+ E ++
Sbjct: 529 AKQLCPNLQAVPYDFHAYKEVARTMYETLASYTHNIEAVSCDEALVDITEILAETRLTPD 588
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
E A +RT + ++ S G+ N LLA++ + KP+GQ+ L + V FI +
Sbjct: 589 EFANAVRTEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEE--VDDFIRGQLV 646
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAVFSHSTADFFLSVGLGLGSTNTPQ 184
+ G+G+ E L + GI TC ++ + L F T GL
Sbjct: 647 SNLPGVGRSMESKLNSL-GIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRT 705
Query: 185 ARFRKSISSERTFSV--TEDK---ALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXAS 239
+ RKSIS+E + + T+ K A L EI L A K A
Sbjct: 706 EKERKSISAEINYGIRFTQPKEAEAFLLNLSEEIQRRLEAAHVKGKRLTLKVMVRKSGAP 765
Query: 240 FEVR-----------TRAVTLQKYISSSEDILKHA-SVLLKAELPVS-LRLIGLRVTQFN 286
E TR VTL + S++ I K ++ +L +S +R +G+ V Q
Sbjct: 766 VETAKFGGHGICDNITRTVTLDQATDSAKIIGKATLNMFHTMKLNISDMRGVGIHVNQLV 825
Query: 287 EDKVRAPSDPTQKTLTNFMTSGH 309
+ P++ ++ SGH
Sbjct: 826 PTNPNPSACPSRPSVQ----SGH 844
>UNIPROTKB|F1P5H4 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0009411
"response to UV" evidence=IEA] [GO:0017125 "deoxycytidyl
transferase activity" evidence=IEA] [GO:0042276 "error-prone
translesion synthesis" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 OMA:YRFCRGL
EMBL:AADN02017696 EMBL:AADN02017697 IPI:IPI01017381
Ensembl:ENSGALT00000027069 Uniprot:F1P5H4
Length = 1255
Score = 221 (82.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 69/221 (31%), Positives = 101/221 (45%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A+KLCP L V DF Y + ++ Y N A S DEA +DITE+ E ++
Sbjct: 540 AKKLCPNLQAVSYDFNAYKEVAQTVYEILASYTHNIEAVSCDEALVDITEILTETRLTPD 599
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
E+A +R + + T S G+ N LLA++ + KP+GQ+ L + V FI +
Sbjct: 600 ELANAIRDEIKAQTKCTASVGMGSNILLARMATRKAKPDGQYHLKPEE--VDDFIRGQLV 657
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEMLQKGSL--LCAVFSHSTADFFLSVGLGLGSTNTP 183
+ G+G+ E L + GI TC + LQ S+ L F T GL
Sbjct: 658 TNLPGVGRSMESKLASL-GIRTCGD-LQCASMSKLQKEFGPKTGQMLYRFCRGLDDRPVR 715
Query: 184 QARFRKSISSERTFSV--TEDK---ALLYRKLAEIAEMLSA 219
+ RKS+S+E + + T+ K A L EI L A
Sbjct: 716 TEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEA 756
>UNIPROTKB|Q4KWZ7 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0019985
"translesion synthesis" evidence=TAS] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0002206 "gene conversion of
immunoglobulin genes" evidence=IMP] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005654 GO:GO:0000287
GO:GO:0003684 GO:GO:0006260 GO:GO:0006302 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 Reactome:REACT_115612 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03515 EMBL:AY675169 IPI:IPI00571721 RefSeq:NP_001025982.2
UniGene:Gga.24037 ProteinModelPortal:Q4KWZ7 SMR:Q4KWZ7
STRING:Q4KWZ7 GeneID:418703 KEGG:gga:418703 CTD:51455
HOGENOM:HOG000154094 HOVERGEN:HBG054140 InParanoid:Q4KWZ7
OrthoDB:EOG4GF3DF NextBio:20821851 GO:GO:0002206 Uniprot:Q4KWZ7
Length = 1255
Score = 221 (82.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 69/221 (31%), Positives = 101/221 (45%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A+KLCP L V DF Y + ++ Y N A S DEA +DITE+ E ++
Sbjct: 540 AKKLCPNLQAVSYDFNAYKEVAQTVYEILASYTHNIEAVSCDEALVDITEILTETRLTPD 599
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
E+A +R + + T S G+ N LLA++ + KP+GQ+ L + V FI +
Sbjct: 600 ELANAIRDEIKAQTKCTASVGMGSNILLARMATRKAKPDGQYHLKPEE--VDDFIRGQLV 657
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEMLQKGSL--LCAVFSHSTADFFLSVGLGLGSTNTP 183
+ G+G+ E L + GI TC + LQ S+ L F T GL
Sbjct: 658 TNLPGVGRSMESKLASL-GIRTCGD-LQCASMSKLQKEFGPKTGQMLYRFCRGLDDRPVR 715
Query: 184 QARFRKSISSERTFSV--TEDK---ALLYRKLAEIAEMLSA 219
+ RKS+S+E + + T+ K A L EI L A
Sbjct: 716 TEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEA 756
>UNIPROTKB|P63987 [details] [associations]
symbol:dinB2 "DNA polymerase IV 2" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005829 GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:BX842581 GO:GO:0003887 eggNOG:COG0389
HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
SUPFAM:SSF100879 PIR:A70649 RefSeq:NP_217572.1 RefSeq:NP_337660.1
RefSeq:YP_006516517.1 ProteinModelPortal:P63987 SMR:P63987
EnsemblBacteria:EBMYCT00000003933 EnsemblBacteria:EBMYCT00000069414
GeneID:13317860 GeneID:887519 GeneID:923303 KEGG:mtc:MT3142
KEGG:mtu:Rv3056 KEGG:mtv:RVBD_3056 PATRIC:18128668
TubercuList:Rv3056 OMA:IIAHIDI ProtClustDB:PRK03352 Uniprot:P63987
Length = 346
Score = 205 (77.2 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 80/290 (27%), Positives = 134/290 (46%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP A + CPE F+P++ Y S+ + DEAYL + +
Sbjct: 65 MPLRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPD- 123
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDR-MAVMTF 119
IE+AEE+R + + GL+CS G++ N+ AK+ + + KP G + L + MA+M
Sbjct: 124 --DPIEVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIM-- 179
Query: 120 ISSLPIRKIGGIG-KVTEHILRDVFGINTCEEMLQKGS-LLCAVFSHSTADFFLSVGLGL 177
+ + G+G K T+ + + GINT ++ S LL + F TA +L + G
Sbjct: 180 -GDRTVEALWGVGPKTTKRLAK--LGINTVYQLAHTDSGLLMSTFGPRTA-LWLLLAKGG 235
Query: 178 GSTN-TPQARFRKSISSERTF--SVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXX 234
G T + QA +S S TF +T ++ + + E+A+ ++
Sbjct: 236 GDTEVSAQAWVPRSRSHAVTFPRDLT-CRSEMESAVTELAQRTLNEVVASSRTVTRVAVT 294
Query: 235 XXXASFEVRTRAVTLQKYISSSEDILKHAS--VLLKAELPVSLRLIGLRV 282
A+F RT+ LQ S+ D++ A+ VL EL +RL+G+R+
Sbjct: 295 VRTATFYTRTKIRKLQAP-STDPDVITAAARHVLDLFELDRPVRLLGVRL 343
>TIGR_CMR|SPO_3280 [details] [associations]
symbol:SPO_3280 "DNA polymerase IV, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005737 GO:GO:0000287 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003684 GO:GO:0006281 GO:GO:0006261
GO:GO:0003887 HOGENOM:HOG000082707 KO:K02346 Gene3D:3.30.1490.100
SUPFAM:SSF100879 OMA:PALCRDC ProtClustDB:PRK02794
RefSeq:YP_168477.1 ProteinModelPortal:Q5LND1 GeneID:3193147
KEGG:sil:SPO3280 PATRIC:23380003 Uniprot:Q5LND1
Length = 420
Score = 203 (76.5 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 74/268 (27%), Positives = 115/268 (42%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MP F A KLCPE + + + Y S R + + P SLDEA++D++ R
Sbjct: 91 MPMFQALKLCPEAVVIKPRMSVYAEVSKQIRALMDELTPVVEPLSLDEAFMDLSGTQRLH 150
Query: 61 GISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFI 120
G + L + +E G+T S G++ N+ LAKV SD+ KP G V+ R F+
Sbjct: 151 GHPPAVMLARLVKRMKDELGVTGSIGLSHNKFLAKVASDLEKPRGFSVI--GRAETAEFL 208
Query: 121 SSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGS 179
P+R I GIG + L GI T ++L+ + L A F + + G
Sbjct: 209 RDKPVRLIWGIGPAAQESLERA-GIRTFTDLLRWEQEALVARFG-AMGQRLWHLARGEDR 266
Query: 180 TNTPQARFRKSISSERTF-SVTEDKALLYRKLAEIAEMLSADMQKEXXXXXXXXXXXXXA 238
KSIS+E TF T D +L + +AE ++ + A
Sbjct: 267 RRVSAHDPIKSISNETTFFEDTGDADVLDGHIWRMAEKVADRAKARGLAGRVVTLKLKRA 326
Query: 239 SFEVRTRAVTLQKYISSSEDILKHASVL 266
+ V +R +L+ ++ I + A L
Sbjct: 327 NHRVLSRQQSLRDPTQMADRIYRTARAL 354
>UNIPROTKB|Q9UBZ9 [details] [associations]
symbol:REV1 "DNA repair protein REV1" species:9606 "Homo
sapiens" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0017125 "deoxycytidyl transferase
activity" evidence=IEA] [GO:0042276 "error-prone translesion
synthesis" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009411 "response to UV" evidence=IDA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] Reactome:REACT_216 InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0005654
GO:GO:0000287 GO:GO:0003684 GO:GO:0006260 EMBL:AC018690
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887
GO:GO:0042276 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
PDB:3VU7 PDBsum:3VU7 GO:GO:0017125 PDB:2LSK PDBsum:2LSK KO:K03515
CTD:51455 HOGENOM:HOG000154094 HOVERGEN:HBG054140 OrthoDB:EOG4GF3DF
EMBL:AF151538 EMBL:AF206019 EMBL:AB047646 EMBL:AF357886
EMBL:AK002087 EMBL:AJ131720 IPI:IPI00008816 IPI:IPI00552928
IPI:IPI00552936 RefSeq:NP_001032961.1 RefSeq:NP_057400.1
UniGene:Hs.443077 PDB:2EBW PDB:2LSY PDB:3GQC PDBsum:2EBW
PDBsum:2LSY PDBsum:3GQC ProteinModelPortal:Q9UBZ9 SMR:Q9UBZ9
MINT:MINT-140323 STRING:Q9UBZ9 PhosphoSite:Q9UBZ9 DMDM:59798439
PaxDb:Q9UBZ9 PRIDE:Q9UBZ9 Ensembl:ENST00000258428
Ensembl:ENST00000393445 GeneID:51455 KEGG:hsa:51455 UCSC:uc002tac.3
UCSC:uc002tad.3 UCSC:uc002tae.1 GeneCards:GC02M100016
HGNC:HGNC:14060 HPA:HPA044534 HPA:HPA051036 MIM:606134
neXtProt:NX_Q9UBZ9 PharmGKB:PA162401120 InParanoid:Q9UBZ9
OMA:YRFCRGL PhylomeDB:Q9UBZ9 ChiTaRS:REV1 EvolutionaryTrace:Q9UBZ9
GenomeRNAi:51455 NextBio:55069 ArrayExpress:Q9UBZ9 Bgee:Q9UBZ9
CleanEx:HS_REV1 Genevestigator:Q9UBZ9 GermOnline:ENSG00000135945
Uniprot:Q9UBZ9
Length = 1251
Score = 209 (78.6 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 66/224 (29%), Positives = 98/224 (43%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A++LCP L VP DF Y + + Y N A S DEA +DITE+ E ++
Sbjct: 529 AKQLCPNLQAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAETKLTPD 588
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
E A +R + ++ S G+ N LLA++ + KP+GQ+ L + V FI +
Sbjct: 589 EFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEE--VDDFIRGQLV 646
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAVFSHSTADFFLSVGLGLGSTNTPQ 184
+ G+G E L + GI TC ++ + L F T GL
Sbjct: 647 TNLPGVGHSMESKLASL-GIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRT 705
Query: 185 ARFRKSISSERTFSV--TEDK---ALLYRKLAEIAEMLSADMQK 223
+ RKS+S+E + + T+ K A L EI L A K
Sbjct: 706 EKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEATGMK 749
>TAIR|locus:2156319 [details] [associations]
symbol:REV1 species:3702 "Arabidopsis thaliana"
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA;IDA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0010224 "response to UV-B"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000287 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 GO:GO:0006974 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0010224 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AB016874 EMBL:AC002342
EMBL:AB187523 EMBL:EF016093 EMBL:EF016094 EMBL:EF016095
EMBL:EF016096 EMBL:EF016097 EMBL:EF016098 EMBL:AY080825
IPI:IPI00517369 IPI:IPI00554422 IPI:IPI00837466 IPI:IPI00891315
RefSeq:NP_001119373.1 RefSeq:NP_199288.4 UniGene:At.30056
ProteinModelPortal:A3EWL3 SMR:A3EWL3 STRING:A3EWL3 PRIDE:A3EWL3
EnsemblPlants:AT5G44750.2 GeneID:834504 KEGG:ath:AT5G44750
TAIR:At5g44750 HOGENOM:HOG000246421 KO:K03515 OMA:TIPYDFD
PhylomeDB:A3EWL3 ProtClustDB:CLSN2681660 Genevestigator:A3EWL3
Uniprot:A3EWL3
Length = 1105
Score = 208 (78.3 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 84/351 (23%), Positives = 157/351 (44%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A+ LCP+L+ VP +F Y +D + ++ A S DEA+LD++++ +
Sbjct: 435 AKDLCPQLVIVPYNFEAYEEVADQFYDILHRHCRKVQALSCDEAFLDVSDLS---DVETE 491
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
+A +R + E G + SAG+ L+A++ + + KP GQ + ++ V F+ LP+
Sbjct: 492 VLASTIRNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLYISAEK--VEEFLDQLPV 549
Query: 126 RKIGGIGKVT-EHILRDVFGINTCEEM--LQKGSLLCAVFSHSTADFFLSVGLGLGSTNT 182
+ G+G V E +++ I TC ++ + K SL F T + S GL +
Sbjct: 550 GTLPGVGSVLKEKLVKQ--NIQTCGQLRLISKDSLQ-KDFGVKTGEMLWSYSRGLDLRSV 606
Query: 183 PQARFRKSISSERTFSVT----EDKALLYRKLA-----EIA------EML----SADMQK 223
+ KSI +E + V +D +L + E++ EM+ + ++K
Sbjct: 607 TAVQESKSIGAEVNWGVRFRDQQDVFILVQHFLQCLCKEVSLRLQGCEMIGRTFTLKIKK 666
Query: 224 EXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAE--LPVS-LRLIGL 280
+ +R++T+ E +L+ S L L V +R +GL
Sbjct: 667 RKKDAEEPTKYMGCGDCDNLSRSITVPAATDDIE-VLQRISKKLFGSFCLDVKEVRGVGL 725
Query: 281 RVTQFNEDKVRAPSDPTQKTLTNFMTSGHASKKIVGDQNSLGSDI--NDDC 329
+V++ + PS+ +TL ++++S A +I D N + + N DC
Sbjct: 726 QVSKLDSAD---PSNKGSRTLKSWLSSAPAVVQIEQDDNVFAAKVRENSDC 773
>UNIPROTKB|F1N787 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 GO:GO:0009411 GO:GO:0000287 GO:GO:0003684
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887
GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879 GO:GO:0017125
GeneTree:ENSGT00530000062942 OMA:YRFCRGL EMBL:DAAA02030163
EMBL:DAAA02030164 EMBL:DAAA02030165 EMBL:DAAA02030166
EMBL:DAAA02030167 EMBL:DAAA02030168 IPI:IPI00731687
Ensembl:ENSBTAT00000061518 Uniprot:F1N787
Length = 1202
Score = 207 (77.9 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 64/220 (29%), Positives = 97/220 (44%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A++LCP L VP DF Y + + Y + A S DEA +DITE+ E ++
Sbjct: 478 AKQLCPNLQAVPYDFHAYKEVAQTMYETLASYTHDIEAVSCDEALVDITEILAETRLTPD 537
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
E A +R + ++ S G+ N LLA++ + KP+GQ+ L + V FI +
Sbjct: 538 EFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEE--VDDFIRGQLV 595
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAVFSHSTADFFLSVGLGLGSTNTPQ 184
+ G+G+ E L + GI TC ++ + L F T GL
Sbjct: 596 TNLPGVGRSMESKLMSL-GIRTCGDLQYMTMAKLQKEFGSKTGQMLYRFCRGLDDRPVRT 654
Query: 185 ARFRKSISSERTFSVT-----EDKALLYRKLAEIAEMLSA 219
+ RKSIS+E + + E +A L EI L A
Sbjct: 655 EKERKSISAEINYGIRFSQPKEAEAFLLSLSEEIQRRLEA 694
>MGI|MGI:1891457 [details] [associations]
symbol:Polh "polymerase (DNA directed), eta (RAD 30
related)" species:10090 "Mus musculus" [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006290
"pyrimidine dimer repair" evidence=IDA] [GO:0006301
"postreplication repair" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0010225 "response to UV-C"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 MGI:MGI:1891457 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 HOGENOM:HOG000115605 HOVERGEN:HBG053633 OMA:SPPLTML
OrthoDB:EOG4RBQJ8 InterPro:IPR017061 PIRSF:PIRSF036603
EMBL:AB027128 EMBL:AB037184 EMBL:AK036296 IPI:IPI00122040
RefSeq:NP_109640.1 UniGene:Mm.311585 ProteinModelPortal:Q9JJN0
SMR:Q9JJN0 IntAct:Q9JJN0 STRING:Q9JJN0 PhosphoSite:Q9JJN0
PRIDE:Q9JJN0 Ensembl:ENSMUST00000024749 GeneID:80905 KEGG:mmu:80905
UCSC:uc008crx.1 GeneTree:ENSGT00530000062942 InParanoid:Q9JJN0
NextBio:350254 Bgee:Q9JJN0 CleanEx:MM_POLH Genevestigator:Q9JJN0
GermOnline:ENSMUSG00000023953 Uniprot:Q9JJN0
Length = 694
Score = 149 (57.5 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 39/136 (28%), Positives = 69/136 (50%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G I EE+R ++ + G CSAG++ N++LAK+ +NKPN Q ++ + +V S +
Sbjct: 192 GAMIVEEMRAAIESKTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFSQM 249
Query: 124 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 181
PIRKI +G K+ ++ +V GI ++ Q S L + F + ++ G+
Sbjct: 250 PIRKIRSLGGKLGASVI-EVLGIEYMGDLTQFTESQLQSHFGEKNGSWLYAMCRGIEHDP 308
Query: 182 TPQARFRKSISSERTF 197
+ K+I + F
Sbjct: 309 VKPRQLPKTIGCSKNF 324
Score = 88 (36.0 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 29/85 (34%), Positives = 42/85 (49%)
Query: 6 ARKLCPELIFVPT-------DFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCR 58
A+KLCP+L+ + TKY S ++ Y AS+DEAY+D+T +
Sbjct: 68 AKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIM-SYFAVIERASIDEAYIDLTSAVQ 126
Query: 59 ER--GISGIEIAEELRTSVYEEAGL 81
ER + G I+ +L S Y E GL
Sbjct: 127 ERLQKLQGQPISADLLPSTYIE-GL 150
Score = 57 (25.1 bits), Expect = 6.2e-13, Sum P(3) = 6.2e-13
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 433 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 466
D C C + +P + + EH+D+H A LQK
Sbjct: 612 DQVLCEKCDSLVP---VWDMPEHTDYHFALELQK 642
>UNIPROTKB|F1STE9 [details] [associations]
symbol:REV1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 Pfam:PF00533 GO:GO:0009411 GO:GO:0000287
GO:GO:0003684 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0003887 GO:GO:0042276 Gene3D:3.30.1490.100 SUPFAM:SSF100879
GO:GO:0017125 GeneTree:ENSGT00530000062942 OMA:YRFCRGL
EMBL:FP326722 EMBL:CU972417 EMBL:CU694748
Ensembl:ENSSSCT00000008958 Uniprot:F1STE9
Length = 1253
Score = 206 (77.6 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 57/195 (29%), Positives = 89/195 (45%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A++LCP L VP DF Y + + Y N A S DEA +DITE+ E ++
Sbjct: 528 AKQLCPSLQAVPYDFHAYKEVARTMYETLASYTHNIEAVSCDEALVDITEILAETRLTPD 587
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
E A +R + ++ S G+ N LLA++ + KP+GQ+ L + V FI +
Sbjct: 588 EFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEE--VDDFIRGQLV 645
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAVFSHSTADFFLSVGLGLGSTNTPQ 184
+ G+G+ E L + GI TC ++ + L F T GL
Sbjct: 646 TNLPGVGRSMESKLMSL-GIRTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRT 704
Query: 185 ARFRKSISSERTFSV 199
+ RKS+S+E + +
Sbjct: 705 EKERKSVSAEINYGI 719
>ASPGD|ASPL0000012133 [details] [associations]
symbol:AN3909 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017956 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573
PROSITE:PS50173 SMART:SM00384 InterPro:IPR001357 GO:GO:0000287
GO:GO:0003684 GO:GO:0006281 EMBL:BN001302 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 EMBL:AACD01000064 GO:GO:0003887
eggNOG:COG0389 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 InterPro:IPR025527 Pfam:PF14377 KO:K03515
OrthoDB:EOG49PF6V RefSeq:XP_661513.1 ProteinModelPortal:Q5B6C1
STRING:Q5B6C1 EnsemblFungi:CADANIAT00004788 GeneID:2873330
KEGG:ani:AN3909.2 HOGENOM:HOG000216225 OMA:SAEVNWG Uniprot:Q5B6C1
Length = 1139
Score = 203 (76.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 87/315 (27%), Positives = 138/315 (43%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGIS-- 63
A + CP+L +P DF Y S + D + S+DEA +DIT +C E G S
Sbjct: 400 ALQACPDLRVLPYDFPAYEEASRKFYRAILGIDGLVQSVSIDEALVDITTICLEAGGSEG 459
Query: 64 -GI-------------EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVL 109
G+ E+AE+LR ++ E G S G+ N L AKV KP GQF L
Sbjct: 460 KGVSEGSIYREQAKADEVAEQLRAAIKRETGCAVSVGIGGNILQAKVALRKAKPAGQFQL 519
Query: 110 PNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKG-SLLCAVFSHSTAD 168
D AV+ FI LP++ + G+G L D+ G+ +++ L + T
Sbjct: 520 KPD--AVLDFIGELPVQNLPGVGYSLSAKLEDL-GVKIVKDIRDLSREKLSSSLGPKTGA 576
Query: 169 FFLSVGLGLGSTNTPQARFRKSISSERTFS---VTEDKAL---------LYRKLAEI--- 213
G+ T RKS+S+E + VT+D+A L+R+L E
Sbjct: 577 KLADYARGIDRTEVGNEVTRKSVSAEVNWGIRFVTQDQAEDFMRSLCEELHRRLVENLMK 636
Query: 214 AEMLSAD-MQKEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDIL-KHASVLLK--A 269
+ L+ M++ +V ++V L +++ D+L K A +L+ A
Sbjct: 637 GQQLTLKVMRRALDAPLEAVKHLGHGKCDVFNKSVILG-IATNAADVLGKEAIAMLRSLA 695
Query: 270 ELPVSLRLIGLRVTQ 284
P LR +G+++T+
Sbjct: 696 ISPGDLRGLGVQMTK 710
>RGD|1309893 [details] [associations]
symbol:Polh "polymerase (DNA directed), eta" species:10116
"Rattus norvegicus" [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006290 "pyrimidine dimer repair"
evidence=IEA;ISO] [GO:0006301 "postreplication repair"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010225 "response to UV-C" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
RGD:1309893 GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
EMBL:CH473987 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
CTD:5429 OMA:SPPLTML OrthoDB:EOG4RBQJ8 InterPro:IPR017061
PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942 IPI:IPI00194322
RefSeq:NP_001101674.1 UniGene:Rn.53711 Ensembl:ENSRNOT00000026049
GeneID:316235 KEGG:rno:316235 UCSC:RGD:1309893 NextBio:670614
Uniprot:D4ADZ0
Length = 689
Score = 149 (57.5 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 38/136 (27%), Positives = 69/136 (50%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G I EE+R ++ + G CSAG++ N++LAK+ +NKPN Q ++ + +V S +
Sbjct: 192 GAVIVEEMRAAIERKTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFSQM 249
Query: 124 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 181
PIRKI +G K+ ++ DV G+ ++ Q + L + F + ++ G+
Sbjct: 250 PIRKIRSLGGKLGASVI-DVLGVEYMGDLTQFTEAQLQSHFGEKNGSWLYAMCRGIEHEP 308
Query: 182 TPQARFRKSISSERTF 197
+ K+I + F
Sbjct: 309 VKPRQLPKTIGCSKNF 324
Score = 84 (34.6 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 6 ARKLCPELIFVPT-------DFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCR 58
A+KLCP+L+ + TKY S ++ + AS+DEAY+D+T +
Sbjct: 68 AKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSHFAV-IERASIDEAYIDLTNAVQ 126
Query: 59 ER--GISGIEIAEELRTSVYEEAGL 81
ER + G ++ +L S Y E GL
Sbjct: 127 ERLEKLQGQPVSADLLPSTYIE-GL 150
Score = 57 (25.1 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 412 DITPDNKVGTSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 466
++ ++ + +S + Q D C C + +P + + EH D+H A LQK
Sbjct: 587 NVAGNSSLAYNSQEMTQRAAEDQVLCEKCDSLVP---VWDMPEHLDYHFALELQK 638
>UNIPROTKB|J3KTN3 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI Ensembl:ENST00000583136 Uniprot:J3KTN3
Length = 222
Score = 148 (57.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 40/102 (39%), Positives = 61/102 (59%)
Query: 51 LDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLP 110
+++ +V R + G +IA E+R ++Y + GLT AGVA N+LLAK+ S + KPN Q VL
Sbjct: 120 INLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLL 179
Query: 111 NDRMAVMTFISSLP-IRKIGGIGKVTEHILRDVFGINTCEEM 151
+ + I SL I++I GIG T L + GIN+ ++
Sbjct: 180 PE--SCQHLIHSLNHIKEIPGIGYKTAKCL-EALGINSVRDL 218
Score = 74 (31.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 6 ARKLCPELIFVP-TDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
A++ CP+L+ V D T+Y S ++ ++ P DE ++D+TE+ +R
Sbjct: 41 AKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKR 96
>MGI|MGI:1929074 [details] [associations]
symbol:Rev1 "REV1 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0009411 "response to UV" evidence=ISO]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0017125
"deoxycytidyl transferase activity" evidence=IDA] [GO:0042276
"error-prone translesion synthesis" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 MGI:MGI:1929074 Pfam:PF00533 GO:GO:0005634
GO:GO:0009411 GO:GO:0000287 GO:GO:0003684 GO:GO:0006260
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887
GO:GO:0042276 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
PDB:4FJO PDBsum:4FJO GO:GO:0017125 GeneTree:ENSGT00530000062942
PDB:2LSJ PDBsum:2LSJ KO:K03515 CTD:51455 HOGENOM:HOG000154094
HOVERGEN:HBG054140 OrthoDB:EOG4GF3DF OMA:YRFCRGL ChiTaRS:REV1
EMBL:AB057418 EMBL:AF179302 EMBL:BC058093 IPI:IPI00396706
RefSeq:NP_062516.2 UniGene:Mm.389103 PDB:2LSG PDBsum:2LSG
ProteinModelPortal:Q920Q2 SMR:Q920Q2 DIP:DIP-41772N IntAct:Q920Q2
STRING:Q920Q2 PhosphoSite:Q920Q2 PRIDE:Q920Q2
Ensembl:ENSMUST00000027251 GeneID:56210 KEGG:mmu:56210
UCSC:uc007asp.1 InParanoid:Q920Q2 NextBio:312050 Bgee:Q920Q2
CleanEx:MM_REV1 Genevestigator:Q920Q2 GermOnline:ENSMUSG00000026082
Uniprot:Q920Q2
Length = 1249
Score = 201 (75.8 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 64/220 (29%), Positives = 97/220 (44%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A++LCP L VP DF + + Y + A S DEA +D+T++ E +S
Sbjct: 527 AKQLCPNLQAVPYDFHACREVAQAMYETLASYTHSIEAVSCDEALIDVTDILAETKLSPE 586
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
E A LR + ++ S G+ N LLA++ + KP+GQ+ L D V FI +
Sbjct: 587 EFAAALRIEIKDKTKCAASVGIGSNILLARMATKKAKPDGQYHLQPDE--VDDFIRGQLV 644
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAVFSHSTADFFLSVGLGLGSTNTPQ 184
+ G+G+ E L + GI TC ++ + L F T GL
Sbjct: 645 TNLPGVGRSMESKLASL-GIKTCGDLQCLTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRT 703
Query: 185 ARFRKSISSERTFSV--TEDK---ALLYRKLAEIAEMLSA 219
+ RKS+S+E + + T+ K A L EI L A
Sbjct: 704 EKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEA 743
>ZFIN|ZDB-GENE-060421-4949 [details] [associations]
symbol:polh "polymerase (DNA directed), eta"
species:7955 "Danio rerio" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 ZFIN:ZDB-GENE-060421-4949 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:AL929536 IPI:IPI00758987 Ensembl:ENSDART00000139589
OMA:MKSLEKH ArrayExpress:F1Q7Z9 Bgee:F1Q7Z9 Uniprot:F1Q7Z9
Length = 749
Score = 147 (56.8 bits), Expect = 3.0e-12, Sum P(4) = 3.0e-12
Identities = 39/136 (28%), Positives = 64/136 (47%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G I E++R +V E G CSAG++ N++LAK+ +NKPN Q VLP +V S+L
Sbjct: 192 GALIVEQMRAAVEEHTGFRCSAGISHNKVLAKLACGLNKPNRQTVLPLS--SVPQLFSTL 249
Query: 124 PIRKIGGIGKVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTNT 182
PI KI +G + + + ++ + + L F T + + G+
Sbjct: 250 PISKIRNLGGKLGSSITETLSVENMGDLTRFSRAQLEQHFGDKTGPWLYDLCRGIEFEPV 309
Query: 183 PQARFRKSISSERTFS 198
+ KSI + F+
Sbjct: 310 KPRQLPKSIGCSKNFA 325
Score = 73 (30.8 bits), Expect = 3.0e-12, Sum P(4) = 3.0e-12
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 6 ARKLCPELIF--VPTDFTK--YTYYSDLTRKVFCKYDPNFMA---ASLDEAYLDITEVCR 58
ARKLCP+L VP K T+Y + + +V + F AS+DEAY+D+T +
Sbjct: 68 ARKLCPDLQVARVPEAHGKADLTHYREASVEVI-EVMSRFAVIERASIDEAYMDLTASVQ 126
Query: 59 ER 60
ER
Sbjct: 127 ER 128
Score = 62 (26.9 bits), Expect = 3.0e-12, Sum P(4) = 3.0e-12
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 437 CSLCGTEMPPSFIEERQEHSDFHLAERLQKE-ESGSDLRILT 477
C CG ++ + E EH+D+H A LQK SGS ++ T
Sbjct: 686 CERCGMKV---LVWEFPEHADYHFALDLQKSFSSGSPSQMKT 724
Score = 45 (20.9 bits), Expect = 3.0e-12, Sum P(4) = 3.0e-12
Identities = 17/80 (21%), Positives = 34/80 (42%)
Query: 365 ENCSFSNKISEVEKIHENEV-SQLLEGNSLVLRQEEGSCCDGVEEVDKDITPDNKVGTSS 423
EN + + + + + + E+ + L G+ E +C D + I+ + +
Sbjct: 480 ENTTSISAFFQRKSLEKQEIQNSLCPGDQSTSASGEHACGDTAAQKTTAISTFLQRESLE 539
Query: 424 NQKDQFIWLDDYKCSLCGTE 443
Q+ Q + LDD S+C E
Sbjct: 540 KQEIQNVSLDDEDQSVCAPE 559
>RGD|1306715 [details] [associations]
symbol:Rev1 "REV1, polymerase (DNA directed)" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA;ISO] [GO:0017125
"deoxycytidyl transferase activity" evidence=IEA;ISO] [GO:0042276
"error-prone translesion synthesis" evidence=IEA;ISO]
InterPro:IPR001126 InterPro:IPR012112 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573
PROSITE:PS50173 InterPro:IPR001357 Pfam:PF00533 RGD:1306715
GO:GO:0000287 GO:GO:0003684 GO:GO:0006281 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 EMBL:CH473965 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
KO:K03515 CTD:51455 OrthoDB:EOG4GF3DF IPI:IPI00951348
RefSeq:NP_001101683.1 UniGene:Rn.94641 Ensembl:ENSRNOT00000067197
GeneID:316344 KEGG:rno:316344 UCSC:RGD:1306715 NextBio:670745
Uniprot:D3ZRU9
Length = 1119
Score = 199 (75.1 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 63/220 (28%), Positives = 95/220 (43%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A++LCP L VP DF + + Y + A S DEA +D+T++ E +S
Sbjct: 527 AKQLCPNLQAVPYDFHACREVAQALYETLASYTHSIEAVSCDEALIDVTDILAETKLSPE 586
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
E A LR + + S G+ N LLA++ + KP+GQ+ L D V FI +
Sbjct: 587 EFAAALRMEIKNKTQCAASVGIGSNILLARMATKKAKPDGQYHLQPDE--VDDFIRGQLV 644
Query: 126 RKIGGIGKVTEHILRDVFGINTCEEM-LQKGSLLCAVFSHSTADFFLSVGLGLGSTNTPQ 184
+ G+G+ E L + GI TC ++ + L F T GL
Sbjct: 645 TSLPGVGRSMESKLASL-GIKTCGDLQCLTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRT 703
Query: 185 ARFRKSISSERTFSVT-----EDKALLYRKLAEIAEMLSA 219
+ RKS+S+E + + E +A L EI L A
Sbjct: 704 EKERKSVSAEINYGIRFTQPREAEAFLLSLSGEIQSRLEA 743
>FB|FBgn0037141 [details] [associations]
symbol:DNApol-eta "DNApol-eta" species:7227 "Drosophila
melanogaster" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP;IDA;NAS] [GO:0019985 "translesion synthesis"
evidence=ISS;NAS;IDA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IMP] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0000724 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
HSSP:P96022 InterPro:IPR017061 PIRSF:PIRSF036603 EMBL:AY058771
EMBL:AB049433 EMBL:AB036766 IntAct:Q9GNC0 STRING:Q9GNC0
FlyBase:FBgn0037141 InParanoid:Q9GNC0 OrthoDB:EOG4XPNX1
Uniprot:Q9GNC0
Length = 885
Score = 177 (67.4 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 56/207 (27%), Positives = 100/207 (48%)
Query: 25 YYSDLTRKVFCKY-DPNFMAASLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTC 83
Y + +T + Y D S D+ L R + G +A E+R +V +E G C
Sbjct: 168 YVNKITNRFANPYMDDERYQMSYDQNDLPAVRQSDIRLLIGASVAGEVRAAVKKETGYEC 227
Query: 84 SAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVF 143
SAG+A N++LAK+ + +NKPN Q +LP A + SLP+ KI G+G ++ +
Sbjct: 228 SAGIAHNKILAKLAAGMNKPNKQTILPLTETA--SLFDSLPVGKIKGLGGKFGEVVCETL 285
Query: 144 GINTCEEMLQKGSL-LCAVFSHSTADFFLSVGLGLG-STNTPQARFRKSISSERTF---- 197
GI ++++ + L F + ++ G+ TP+ + KSI + F
Sbjct: 286 GIKFMGQVVKFSEVDLQRKFDEKNGTWLFNISRGIDLEAVTPRF-YSKSIGCCKKFPGRN 344
Query: 198 SVTEDKALLYRKLAEIAEMLSADMQKE 224
++T K L + L E++ ++ ++K+
Sbjct: 345 NITGLKTLQHW-LGELSSEINDRLEKD 370
Score = 69 (29.3 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 447 SFIE--ERQEHSDFHLAERLQKEESGSDLRILT---HRERCVRTQRDHIASHRKRKKQKL 501
+FI+ + EH D+H+A+ LQ+E + DLR T ++E+ Q S +K
Sbjct: 810 AFIKCVDMPEHLDYHVAKNLQRELNQQDLRTRTAALNKEKTSPVQPKK-QSQKKLNSTIS 868
Query: 502 FEKEGTHIPIDMFFAKRN 519
GT I FF++ N
Sbjct: 869 ASSSGTKT-IAQFFSQSN 885
Score = 67 (28.6 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 19/69 (27%), Positives = 28/69 (40%)
Query: 432 LDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKEESGSDLRILTHRERCVRTQRDHIA 491
L KC CG +P ++ Q H D H A+ L + LR ER Q+ +
Sbjct: 703 LPTIKCDQCGANIPDE-VKSLQTHRDHHFAQELSRT-----LRSTEREERTQSRQKISLK 756
Query: 492 SHRKRKKQK 500
+K +K
Sbjct: 757 PTPPKKSKK 765
>UNIPROTKB|D4A662 [details] [associations]
symbol:Polk "Protein Polk" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001126
InterPro:IPR006642 InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173
SMART:SM00734 RGD:620058 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
IPI:IPI00951859 Ensembl:ENSRNOT00000065248 ArrayExpress:D4A662
Uniprot:D4A662
Length = 434
Score = 190 (71.9 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 1 MPGFIARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
MPGFIA++LCP+LI VP +F KY S +++ +YDPNFMA SLDEAYL+IT+ +ER
Sbjct: 151 MPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQER 210
>TAIR|locus:2156309 [details] [associations]
symbol:POLH "Y-family DNA polymerase H" species:3702
"Arabidopsis thaliana" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281
"DNA repair" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010224 "response to UV-B" evidence=IMP]
[GO:0042276 "error-prone translesion synthesis" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0042732 "D-xylose metabolic process" evidence=RCA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 EMBL:CP002688
GO:GO:0003684 GO:GO:0010224 GO:GO:0003887 GO:GO:0042276
Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:P96022 KO:K03509
InterPro:IPR017061 PIRSF:PIRSF036603 EMBL:AJ416380 IPI:IPI00537089
RefSeq:NP_568638.2 UniGene:At.19023 SMR:Q8H2D5 IntAct:Q8H2D5
STRING:Q8H2D5 EnsemblPlants:AT5G44740.2 GeneID:834503
KEGG:ath:AT5G44740 TAIR:At5g44740 InParanoid:Q8H2D5 OMA:CPLRYGT
ProtClustDB:CLSN2680435 Genevestigator:Q8H2D5 Uniprot:Q8H2D5
Length = 672
Score = 182 (69.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 55/175 (31%), Positives = 92/175 (52%)
Query: 58 RERGIS-GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAV 116
R++ +S GI I ELR V +E TCSAG+A N++LAK+ S +NKP Q V+P AV
Sbjct: 181 RDKLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVPY--AAV 238
Query: 117 MTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGL 175
+SSLPI+K+ +G L+ G++T ++LQ + L + +T + ++
Sbjct: 239 QELLSSLPIKKMKQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQEHYGVNTGTWLWNIAR 298
Query: 176 GLGSTNTPQARFRKSISSERTF-------SVTEDKALLYRKLAEIAEMLSADMQK 223
G+ KS S +TF S++ + L + E++E L +D+++
Sbjct: 299 GISGEEVQGRLLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSDLEQ 353
Score = 51 (23.0 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 19/62 (30%), Positives = 26/62 (41%)
Query: 1 MPGFIARKLCPE--LIFVPT-----DFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDI 53
M G A+ CP+ L+ VP D Y + K AS+DE YLD+
Sbjct: 68 MRGDEAKAACPQIQLVQVPVARGKADLNLYRSAGSEVVSILAK-SGKCERASIDEVYLDL 126
Query: 54 TE 55
T+
Sbjct: 127 TD 128
>UNIPROTKB|F1MZ79 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010225 "response to UV-C" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 OMA:SPPLTML
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:DAAA02055099 IPI:IPI00691559 Ensembl:ENSBTAT00000007900
Uniprot:F1MZ79
Length = 710
Score = 134 (52.2 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 29/91 (31%), Positives = 53/91 (58%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G I EE+R ++ + G CSAG++ N++LAK+ +NKPN Q ++ + +V + +
Sbjct: 192 GAVIVEEMRAAIERQTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG--SVPQLFNQV 249
Query: 124 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ 153
PI KI +G K+ ++ ++ G+ E+ Q
Sbjct: 250 PISKIRNLGGKLGASVI-EILGVEYMGELTQ 279
Score = 74 (31.1 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 6 ARKLCPELIFVP-------TDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCR 58
A+KLCP+L+ + TKY S +V ++ S+DEAYLD+T +
Sbjct: 67 AKKLCPDLLLAQIRELHGKANLTKYRDASMEVMEVMSRFAV-MERGSIDEAYLDLTSAVQ 125
Query: 59 ER 60
ER
Sbjct: 126 ER 127
Score = 70 (29.7 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 418 KVGTSSNQKDQFIWLDDY-KCSLCGTEMPPSFIEERQEHSDFHLAERLQK---EESGSDL 473
+V + F+ +D C CG+ +P + + EHSD+H A LQ + S+
Sbjct: 612 EVAQKATMTSSFLAAEDQVPCEKCGSLVP---VWDMPEHSDYHFALELQNSFLQPHSSNP 668
Query: 474 RIL-THRERCVRTQRDHIASHRKRKK 498
+++ + R + +AS+ KR +
Sbjct: 669 QVVPASSPQSKRNPKSPLASNNKRPR 694
Score = 41 (19.5 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 148 CEEMLQKGSLLCAVFSHSTADFFLSVGLGLGSTNTPQARFRKSISSERTFSVTEDK 203
CE+ML+ GS A LS L ST+ + + +++S +F ED+
Sbjct: 576 CEKMLKLGSPKTTPTEMDLAQNSLSSLASLTSTSALEVAQKATMTS--SFLAAEDQ 629
>UNIPROTKB|F1PDA5 [details] [associations]
symbol:POLI "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:VFYELPE EMBL:AAEX03000145 Ensembl:ENSCAFT00000000242
Uniprot:F1PDA5
Length = 702
Score = 156 (60.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 51/172 (29%), Positives = 89/172 (51%)
Query: 50 YLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVL 109
Y+++ ++ R + G +IA E+R ++Y + GLT AGVA N+LLAK+ S + KPN Q VL
Sbjct: 148 YINLHDILHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVL 207
Query: 110 PNDRMAVMTFISSLP-IRKIGGIGKVTEHILRDVFGINTCEEMLQKGS-LLCAVFSHSTA 167
+ V+ I SL ++++ GIG T L + GI++ ++ S +L S A
Sbjct: 208 LPESSQVL--IQSLNHVKEMPGIGYKTAKRL-EALGISSVYDLQTFSSKILEKELGISVA 264
Query: 168 DFFLSVGLGLGSTNTPQARFRKSISSERTFSVTEDKALLYRKLAEI-AEMLS 218
+ G ++ + +S S E +F + + K+ E+ A +L+
Sbjct: 265 QRIQKLSFGEDNSPVTPSGPPQSFSEEDSFKKCSSEVEVKNKIEELLASLLN 316
Score = 74 (31.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 6 ARKLCPELIFVP-TDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
A++ CP+L+ V D T+Y S ++ ++ P DE ++D+TE+ +R
Sbjct: 70 AKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKR 125
>MGI|MGI:1347081 [details] [associations]
symbol:Poli "polymerase (DNA directed), iota" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 MGI:MGI:1347081 GO:GO:0005634 GO:GO:0046872
GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 GO:GO:0003887
eggNOG:COG0389 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 CTD:11201
HOGENOM:HOG000234325 HOVERGEN:HBG053634 KO:K03510 OrthoDB:EOG46T310
EMBL:AF151691 EMBL:AY515316 EMBL:AY515317 EMBL:BC082278
IPI:IPI00553425 IPI:IPI00985545 RefSeq:NP_001129562.1
UniGene:Mm.244352 PDB:2KWU PDB:2KWV PDB:3AI4 PDBsum:2KWU
PDBsum:2KWV PDBsum:3AI4 ProteinModelPortal:Q6R3M4 SMR:Q6R3M4
IntAct:Q6R3M4 STRING:Q6R3M4 PhosphoSite:Q6R3M4 PRIDE:Q6R3M4
Ensembl:ENSMUST00000043286 Ensembl:ENSMUST00000161542 GeneID:26447
KEGG:mmu:26447 UCSC:uc008foi.2 UCSC:uc008fok.2 InParanoid:Q6R3M4
BindingDB:Q6R3M4 ChEMBL:CHEMBL5159 NextBio:304545 Bgee:Q6R3M4
CleanEx:MM_POLI Genevestigator:Q6R3M4 GermOnline:ENSMUSG00000038425
Uniprot:Q6R3M4
Length = 717
Score = 157 (60.3 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 41/102 (40%), Positives = 62/102 (60%)
Query: 51 LDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLP 110
+++ + R + G +IA E+R ++Y + GLT AGVAPN+LLAK+ S + KPN Q VL
Sbjct: 163 VNLHNIMHRRLVVGSQIAAEMREAMYNQLGLTGCAGVAPNKLLAKLVSGVFKPNQQTVLL 222
Query: 111 NDRMAVMTFISSLP-IRKIGGIGKVTEHILRDVFGINTCEEM 151
+ + I SL I++I GIG T L +V GIN+ ++
Sbjct: 223 PE--SCQHLIHSLNHIKEIPGIGYKTAKRL-EVLGINSVHDL 261
Score = 71 (30.1 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 6 ARKLCPELIFVP-TDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
A++ CP+L+ V D ++Y S ++ ++ P DE ++D+TE+ +R
Sbjct: 84 AKEKCPQLVLVNGEDLSRYREMSYKVTELLEEFSPAVERLGFDENFVDLTEMVEKR 139
Score = 41 (19.5 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 456 SDFHLAERLQKEESGSDLRILTHRERCVRTQRDHIASHRKRKKQKLFEKE 505
S FH LQ E+ S R + ++ + SH+ + ++L E
Sbjct: 627 SGFHSFPNLQTEQLFSTHRTVDSHKQTATASHQGLESHQGLESRELDSAE 676
>UNIPROTKB|J3KSW2 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI ProteinModelPortal:J3KSW2 Ensembl:ENST00000579434
Uniprot:J3KSW2
Length = 637
Score = 152 (58.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 58/174 (33%), Positives = 87/174 (50%)
Query: 51 LDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLP 110
+++ +V R + G +IA E+R ++Y + GLT AGVA N+LLAK+ S + KPN Q VL
Sbjct: 85 INLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLL 144
Query: 111 NDRMAVMTFISSLP-IRKIGGIGKVTEHILRDVFGINTCEEMLQKGS--LLCAVFSHSTA 167
+ + I SL I++I GIG T L + GIN+ + LQ S +L S A
Sbjct: 145 PE--SCQHLIHSLNHIKEIPGIGYKTAKCL-EALGINSVRD-LQTFSPKILEKELGISVA 200
Query: 168 DFFLSVGLGLGSTNTPQARFR--KSISSERTFSVTEDKALLYRKLAEI-AEMLS 218
L G N+P +S S E +F + K+ E+ A +L+
Sbjct: 201 QRIQK--LSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLN 252
Score = 74 (31.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 6 ARKLCPELIFVP-TDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
A++ CP+L+ V D T+Y S ++ ++ P DE ++D+TE+ +R
Sbjct: 6 AKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKR 61
>UNIPROTKB|Q9UNA4 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0005654 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0006281 GO:GO:0003887 eggNOG:COG0389
Gene3D:3.30.1490.100 SUPFAM:SSF100879 EMBL:AY094607 EMBL:AC093462
EMBL:AF140501 EMBL:AL136670 EMBL:BC032662 EMBL:AF245438
IPI:IPI00296840 RefSeq:NP_009126.2 UniGene:Hs.438533 PDB:1T3N
PDB:1ZET PDB:2ALZ PDB:2DPI PDB:2DPJ PDB:2FLL PDB:2FLN PDB:2FLP
PDB:2KHU PDB:2KHW PDB:2KTF PDB:2L0F PDB:2L0G PDB:3EPG PDB:3EPI
PDB:3G6V PDB:3G6X PDB:3G6Y PDB:3GV5 PDB:3GV7 PDB:3GV8 PDB:3H40
PDB:3H4B PDB:3H4D PDB:3NGD PDB:3OSN PDB:3Q8P PDB:3Q8Q PDB:3Q8R
PDB:3Q8S PDB:4EBC PDB:4EBD PDB:4EBE PDB:4EYH PDB:4EYI PDB:4FS1
PDB:4FS2 PDBsum:1T3N PDBsum:1ZET PDBsum:2ALZ PDBsum:2DPI
PDBsum:2DPJ PDBsum:2FLL PDBsum:2FLN PDBsum:2FLP PDBsum:2KHU
PDBsum:2KHW PDBsum:2KTF PDBsum:2L0F PDBsum:2L0G PDBsum:3EPG
PDBsum:3EPI PDBsum:3G6V PDBsum:3G6X PDBsum:3G6Y PDBsum:3GV5
PDBsum:3GV7 PDBsum:3GV8 PDBsum:3H40 PDBsum:3H4B PDBsum:3H4D
PDBsum:3NGD PDBsum:3OSN PDBsum:3Q8P PDBsum:3Q8Q PDBsum:3Q8R
PDBsum:3Q8S PDBsum:4EBC PDBsum:4EBD PDBsum:4EBE PDBsum:4EYH
PDBsum:4EYI PDBsum:4FS1 PDBsum:4FS2 ProteinModelPortal:Q9UNA4
SMR:Q9UNA4 IntAct:Q9UNA4 MINT:MINT-1189678 STRING:Q9UNA4
PhosphoSite:Q9UNA4 DMDM:59798440 PaxDb:Q9UNA4 PRIDE:Q9UNA4
DNASU:11201 Ensembl:ENST00000579534 GeneID:11201 KEGG:hsa:11201
UCSC:uc002lfj.4 CTD:11201 GeneCards:GC18P051731 H-InvDB:HIX0014457
HGNC:HGNC:9182 HPA:HPA012000 MIM:605252 neXtProt:NX_Q9UNA4
PharmGKB:PA33502 HOGENOM:HOG000234325 HOVERGEN:HBG053634
InParanoid:Q9UNA4 KO:K03510 OMA:VFYELPE OrthoDB:EOG46T310
ChEMBL:CHEMBL5391 ChiTaRS:POLI EvolutionaryTrace:Q9UNA4
GenomeRNAi:11201 NextBio:42637 Bgee:Q9UNA4 CleanEx:HS_POLI
Genevestigator:Q9UNA4 GermOnline:ENSG00000101751 Uniprot:Q9UNA4
Length = 740
Score = 152 (58.6 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 58/174 (33%), Positives = 87/174 (50%)
Query: 51 LDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLP 110
+++ +V R + G +IA E+R ++Y + GLT AGVA N+LLAK+ S + KPN Q VL
Sbjct: 188 INLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLL 247
Query: 111 NDRMAVMTFISSLP-IRKIGGIGKVTEHILRDVFGINTCEEMLQKGS--LLCAVFSHSTA 167
+ + I SL I++I GIG T L + GIN+ + LQ S +L S A
Sbjct: 248 PE--SCQHLIHSLNHIKEIPGIGYKTAKCL-EALGINSVRD-LQTFSPKILEKELGISVA 303
Query: 168 DFFLSVGLGLGSTNTPQARFR--KSISSERTFSVTEDKALLYRKLAEI-AEMLS 218
L G N+P +S S E +F + K+ E+ A +L+
Sbjct: 304 QRIQK--LSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLN 355
Score = 74 (31.1 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 6 ARKLCPELIFVP-TDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
A++ CP+L+ V D T+Y S ++ ++ P DE ++D+TE+ +R
Sbjct: 109 AKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKR 164
>ZFIN|ZDB-GENE-050417-376 [details] [associations]
symbol:poli "polymerase (DNA directed) iota"
species:7955 "Danio rerio" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 ZFIN:ZDB-GENE-050417-376
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 CTD:11201 HOVERGEN:HBG053634 KO:K03510
EMBL:BC092781 IPI:IPI00481247 RefSeq:NP_001017834.1
UniGene:Dr.78857 ProteinModelPortal:Q568P0 SMR:Q568P0 GeneID:550532
KEGG:dre:550532 InParanoid:Q568P0 NextBio:20879773 Uniprot:Q568P0
Length = 710
Score = 153 (58.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 49/162 (30%), Positives = 79/162 (48%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQF-VLPNDRMAVMTFISS 122
G IA E+R +++ GLT AGVA N+LLAK+ S KPN Q +LP+ +M+ ++
Sbjct: 181 GSVIAAEMRQAIFSTLGLTGCAGVASNKLLAKLVSGSFKPNQQTTLLPHSNAELMSSLTG 240
Query: 123 LPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSHSTADFFLSVGLGLGSTNT 182
L K+ GIG T L+ + +N + L S L F A ++ G+ +
Sbjct: 241 LI--KVPGIGYKTREKLKALGLVNVRDLQLYPLSDLVKEFGEMNAKRVQNLACGIDDSPV 298
Query: 183 PQARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSADMQKE 224
A +S+S E +F + +K+ E+ L+ M K+
Sbjct: 299 TPAGPPQSLSDEDSFKKMSTLEEVLKKIEELLINLTERMHKD 340
Score = 72 (30.4 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 10 CPELIFVP-TDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
CP+L+ V D T Y S ++ Y P DE ++D+TE+ +R
Sbjct: 97 CPQLVLVKGEDLTHYREMSYKVTELLMSYCPLVERLGFDENFMDVTEMVEKR 148
>CGD|CAL0001748 [details] [associations]
symbol:orf19.4412 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0017125 "deoxycytidyl transferase activity"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0070987 "error-free translesion synthesis"
evidence=IEA] [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] InterPro:IPR001126 InterPro:IPR012112
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PIRSF:PIRSF036573 PROSITE:PS50173 InterPro:IPR001357 CGD:CAL0001748
Pfam:PF00533 GO:GO:0000287 GO:GO:0003684 GO:GO:0006281
EMBL:AACQ01000179 EMBL:AACQ01000178 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03515 RefSeq:XP_711860.1 RefSeq:XP_723600.1
ProteinModelPortal:Q59Q77 STRING:Q59Q77 GeneID:3646519
GeneID:3646539 KEGG:cal:CaO19.11890 KEGG:cal:CaO19.4412
Uniprot:Q59Q77
Length = 1113
Score = 177 (67.4 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 61/214 (28%), Positives = 99/214 (46%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSD--LTRKVFCKYDPNFMAASLDEAYLDITEVCRERGIS 63
A KLCP+LI +P +F Y +S + K+ + S+DE +D T C G+S
Sbjct: 451 ATKLCPDLILLPYEFESYEKFSSEFYNYLLTSKFFDSIFPVSIDEVLVDATSYCHS-GVS 509
Query: 64 -GIEIAEELRTSVYEEA-GLT-C--SAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMT 118
+ + EL T + ++ LT C S G + N LLAK+ KPNGQF L +D +
Sbjct: 510 DSVSLVNELATRIRKDVFKLTNCPVSVGASTNVLLAKLALRKAKPNGQFYLFDD---IEK 566
Query: 119 FISSLPIRKIGGIGK-VTEHILRDVFGINT-CEEMLQ-KGSLLCAVFSHSTADFFLSVGL 175
F+ S+ I+ + G G+ + E + ++ N ++++ L + T
Sbjct: 567 FLESIYIKDLPGFGRGILEKLNSEIQSSNPQIKDVVTISKQRLVQLLGEKTGTKLFEYAR 626
Query: 176 GLGST------NTPQARF-RKSISSERTFSVTED 202
G+ T N P+A RKS+S + F + D
Sbjct: 627 GMDETSIEIDTNNPEAVLGRKSVSVDVNFGIRFD 660
>RGD|1305212 [details] [associations]
symbol:Poli "polymerase (DNA directed), iota" species:10116
"Rattus norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
RGD:1305212 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 EMBL:CH473971
GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728 Pfam:PF11798
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 CTD:11201 KO:K03510
OrthoDB:EOG46T310 IPI:IPI00870858 RefSeq:NP_001099607.1
UniGene:Rn.136855 Ensembl:ENSRNOT00000016189 GeneID:291526
KEGG:rno:291526 NextBio:632673 Uniprot:D4A8I8
Length = 732
Score = 146 (56.5 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 52/157 (33%), Positives = 77/157 (49%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G +IA E+R +++ + GLT AGVAPN+LLAK+ S + KPN Q VL + + I SL
Sbjct: 196 GSQIAAEMREAMHNQLGLTGCAGVAPNKLLAKLVSGVFKPNQQTVLLPE--SCQHLIHSL 253
Query: 124 P-IRKIGGIGKVTEHILRDVFGINTCEEMLQKGSL--LCAVFSHSTADFFLSVGLGLGST 180
I+++ GIG T L +V GIN+ + LQ + L S A + G +
Sbjct: 254 NHIKEMPGIGYKTAKRL-EVLGINSVHD-LQTFPIKTLEKELGISVAQRIRKLSFGEDKS 311
Query: 181 NTPQARFRKSISSERTFSVTEDKALLYRKLAEIAEML 217
+ +S S E TF + K+ E+ L
Sbjct: 312 PVTPSGPPQSFSEEDTFKKCSSEVEAKTKIEELLSSL 348
Score = 71 (30.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 6 ARKLCPELIFVP-TDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
A++ CP+L+ V D ++Y S ++ ++ P DE ++D+TE+ +R
Sbjct: 104 AKEKCPQLVLVNGEDLSRYREMSYKVTELLEEFSPAVERLGFDENFVDLTEMVEKR 159
>UNIPROTKB|P63985 [details] [associations]
symbol:dinB1 "DNA polymerase IV 1" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] HAMAP:MF_01113
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
InterPro:IPR022880 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005829 GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0006281 EMBL:BX842577 GO:GO:0003887 PIR:F70760
RefSeq:NP_216053.2 RefSeq:NP_336041.2 RefSeq:YP_006514925.1
ProteinModelPortal:P63985 SMR:P63985
EnsemblBacteria:EBMYCT00000000713 EnsemblBacteria:EBMYCT00000071148
GeneID:13320135 GeneID:886414 GeneID:924358 KEGG:mtc:MT1589
KEGG:mtu:Rv1537 KEGG:mtv:RVBD_1537 PATRIC:18125261
TubercuList:Rv1537 eggNOG:COG0389 HOGENOM:HOG000082707 KO:K02346
OMA:LKKADMS ProtClustDB:PRK03348 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 Uniprot:P63985
Length = 468
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 64/262 (24%), Positives = 111/262 (42%)
Query: 45 SLDEAYLDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPN 104
S DEA+ + ++ E LR V +E GL S G + +AK+ S + KP+
Sbjct: 103 SFDEAFAEPPQLAGAVAEDVETFCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPD 162
Query: 105 GQFVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSLLCAVFSH 164
G V+ + + +S LP+R++ GIG V E L + GI T ++ A
Sbjct: 163 GIRVVRHAEEQAL--LSGLPVRRLWGIGPVAEEKLHRL-GIETIGQLAALSDAEAANILG 219
Query: 165 STADFFLS-VGLGLGSTNTPQARFRKSISSERTFSVT-EDKALLYRKLAEIAEMLSADMQ 222
+T L + G+ + K IS+E TF+V L+ + IAE +
Sbjct: 220 ATIGPALHRLARGIDDRPVVERAEAKQISAESTFAVDLTTMEQLHEAIDSIAEHAHQRLL 279
Query: 223 KEXXXXXXXXXXXXXASFEVRTRAVTLQKYISSSEDILKHASVLLKAELPVS-LRLIGLR 281
++ + TR+ T+ + + + A LL L + +RL+G+
Sbjct: 280 RDGRGARTITVKLKKSDMSTLTRSATMPYPTTDAGALFTVARRLLPDPLQIGPIRLLGVG 339
Query: 282 ---VTQFNEDKVRAPSDPTQKT 300
++ ++ + A SD TQ+T
Sbjct: 340 FSGLSDIRQESLFADSDLTQET 361
>FB|FBgn0037554 [details] [associations]
symbol:DNApol-iota "DNApol-iota" species:7227 "Drosophila
melanogaster" [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IMP;IDA;NAS] [GO:0019985 "translesion synthesis"
evidence=ISS;NAS;IDA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
EMBL:AE014297 GO:GO:0003684 GO:GO:0003887 GO:GO:0019985
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 HSSP:P96022
GeneTree:ENSGT00530000062942 KO:K03510 EMBL:AY051762 EMBL:AB049434
RefSeq:NP_649772.1 RefSeq:NP_731214.1 UniGene:Dm.9926 SMR:Q9VHV1
IntAct:Q9VHV1 MINT:MINT-308720 EnsemblMetazoa:FBtr0081797
EnsemblMetazoa:FBtr0081798 GeneID:40965 KEGG:dme:Dmel_CG7602
UCSC:CG7602-RA CTD:40965 FlyBase:FBgn0037554 InParanoid:Q9VHV1
OMA:CCAGIAY OrthoDB:EOG42RBPH GenomeRNAi:40965 NextBio:821498
Uniprot:Q9VHV1
Length = 737
Score = 144 (55.7 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
Identities = 47/170 (27%), Positives = 85/170 (50%)
Query: 57 CRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAV 116
C +R G IA+E+R + G+TC AG+A N+LLAK+ ++PN Q VL +
Sbjct: 157 CAQRLAIGTRIAQEIREELKLRLGITCCAGIAYNKLLAKLVGSSHEPNQQTVLVSTYAE- 215
Query: 117 MTFISSL-PIRKIGGIGKVTEHILRDVFGINTCEEMLQKG-SLLCAVFSHSTADFFLSVG 174
F+ L ++++ GIG+ T+ +L + G+++ E++ Q ++ F TA +
Sbjct: 216 -QFMRELGDLKRVTGIGQKTQCLLLEA-GMSSVEQLQQCDMDVMRKKFGFETATRLRDLA 273
Query: 175 LGLGSTNTPQARFRKSISSE---RTFSVTEDKALLYRKLAE-IAEMLSAD 220
G ++ + K+I E + SV D +R L + + E ++ D
Sbjct: 274 FGRDTSLVRPSGKPKTIGMEDACKPISVRTDVEERFRMLLKRLVEQVAED 323
Score = 66 (28.3 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 6 ARKLCPELIFVP-TDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
A+++CP+L+ V D Y S + Y P DE ++D+T + R
Sbjct: 71 AQRICPDLVLVNGEDLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALVELR 126
Score = 44 (20.5 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 272 PVSLRLIGLRVTQFNEDKVRAPS 294
P ++ L+GL ++F E KV + S
Sbjct: 399 PFNITLLGLAFSKFQERKVGSSS 421
>UNIPROTKB|F1RRJ6 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010225 "response to UV-C" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509 CTD:5429
OMA:SPPLTML InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:CR974460 RefSeq:XP_003356678.1
UniGene:Ssc.83954 Ensembl:ENSSSCT00000001879 GeneID:100153104
KEGG:ssc:100153104 Uniprot:F1RRJ6
Length = 698
Score = 133 (51.9 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 45/166 (27%), Positives = 82/166 (49%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G I EE+R ++ + GL CSAG++ N++LAK+ ++KPN Q ++ +V S +
Sbjct: 193 GAVIVEEMRAAIERQTGLQCSAGISHNKVLAKLACALHKPNRQTLVSLG--SVPQVFSQM 250
Query: 124 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQ-KGSLLCAVFSHSTADFFLSVGLGLGSTN 181
PI K+ +G K+ I+ ++ GI E+ Q S L + F + ++ G+
Sbjct: 251 PISKVRHLGGKLGASII-EILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHEP 309
Query: 182 TPQARFRKSISSERTFS-----VTEDKALLYR-KLA-EIAEMLSAD 220
+ K++ + F VT ++ + +LA E+ E L+ D
Sbjct: 310 VRPRQVTKTLGCGKNFPGKTALVTREQVQWWLLQLAQELEERLTKD 355
Score = 94 (38.1 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 30/102 (29%), Positives = 48/102 (47%)
Query: 6 ARKLCPELIFVPT-------DFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCR 58
A+KLCP+L+ + TKY S +V ++ AS+DEA++D+T R
Sbjct: 68 AKKLCPDLLLAQVLESRGKANLTKYREASAEVMEVMSRF-AMIERASIDEAFVDLTSAVR 126
Query: 59 ER--GISGIEIAEELRTSVYEEA---GLTCSAGVAPNRLLAK 95
ER + G ++ +L + Y E GLT + G + K
Sbjct: 127 ERLQKLQGQPVSADLLPTTYIEGFPQGLTTAEGTVEKEEMRK 168
Score = 77 (32.2 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 433 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKE----ESGSDLRILTHRERCVRTQRD 488
D C CG+ +P + E EHSD+H A LQK S + + + R +
Sbjct: 616 DQVLCEKCGSLVP---VWETPEHSDYHFALELQKSFLQPHSSTSQAVPARSPQSKRNPKS 672
Query: 489 HIASHRKRKK 498
+AS KR +
Sbjct: 673 PLASSHKRPR 682
Score = 43 (20.2 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 294 SDPTQKTLTNFMTSGHASKKIVGDQNSL---GSDINDDCLIDDKETSVSLDVSETNNYEF 350
+ P++ +L F TS + Q +L +ND + + S Y
Sbjct: 509 NSPSKPSLP-FQTSSTTGSEPFFKQKTLLLKQKQLNDPSVFFPPQKPQSSPKELPTEYPD 567
Query: 351 GDPVCDNSL 359
G P C+N+L
Sbjct: 568 GGPACENAL 576
>ASPGD|ASPL0000072145 [details] [associations]
symbol:AN4678 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0019985 "translesion synthesis"
evidence=IEA] [GO:0034087 "establishment of mitotic sister
chromatid cohesion" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 GO:GO:0003684 GO:GO:0006281 EMBL:BN001303
EMBL:AACD01000080 GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 OrthoDB:EOG4M0J8V InterPro:IPR017061
PIRSF:PIRSF036603 RefSeq:XP_662282.1 ProteinModelPortal:Q5B452
STRING:Q5B452 EnsemblFungi:CADANIAT00005754 GeneID:2872476
KEGG:ani:AN4678.2 HOGENOM:HOG000173699 OMA:DDPDWDD Uniprot:Q5B452
Length = 674
Score = 153 (58.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 60/206 (29%), Positives = 98/206 (47%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G EI +RT+V+ TCSAG+A N+++AK+ S NKPN Q V+ N A+ F+S
Sbjct: 263 GAEIVRSVRTAVWNSLSYTCSAGIAKNKMMAKLGSATNKPNKQTVVRN--RAIQNFLSGF 320
Query: 124 PIRKIGGIG-KVTEHILRDVFGINTCEEMLQKGSL--LCAVFSHSTADFFLSVGLGLGST 180
KI +G K+ + + +FG E+L K SL A + TA + + G +
Sbjct: 321 KFTKIRMLGGKLGDQVTA-MFGTEQISELL-KVSLEQFRAKLNDDTAVWLYGIIRGEDKS 378
Query: 181 NT-PQARFRKSISSERTF--SV-TEDKA--LLYRKLAEIAEMLSADMQKEXXXXXXXXXX 234
P+ + KS+ S ++F S+ T D+A L+ A+I L + E
Sbjct: 379 EVNPRTQI-KSMLSAKSFRPSINTLDQADKWLHIFAADIYGRLVEEGVLEHKRRPKTIAL 437
Query: 235 XXXASFEVRTRAVTLQKYISSSEDIL 260
+V++R + + + ED+L
Sbjct: 438 HHRQGAQVKSRQLPIPGSATIDEDLL 463
Score = 56 (24.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 412 DITPDNKV---GTSSNQKDQFIWLDDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKEE 468
DI DN +S+ + + + ++C CG + E EH+D+H A+ L+ +E
Sbjct: 575 DINVDNAQLDDHVASDGEIEQVHSKSFRCPRCGRYINCG---EEDEHNDWHFAKDLETQE 631
>WB|WBGene00014066 [details] [associations]
symbol:rev-1 species:6239 "Caenorhabditis elegans"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001126 InterPro:IPR012112
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PIRSF:PIRSF036573 PROSITE:PS50173 InterPro:IPR001357 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0000287 GO:GO:0003684
GO:GO:0006281 GO:GO:0006974 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 GeneTree:ENSGT00530000062942 EMBL:Z46812 KO:K03515
PIR:T27970 RefSeq:NP_495663.1 ProteinModelPortal:Q09615 SMR:Q09615
IntAct:Q09615 MINT:MINT-227346 STRING:Q09615 EnsemblMetazoa:ZK675.2
GeneID:174275 KEGG:cel:CELE_ZK675.2 UCSC:ZK675.2 CTD:174275
WormBase:ZK675.2 HOGENOM:HOG000016674 InParanoid:Q09615 OMA:DWITESI
NextBio:883331 Uniprot:Q09615
Length = 1027
Score = 159 (61.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 55/219 (25%), Positives = 93/219 (42%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRERGISGI 65
A + CP+L +P F Y S ++ Y A S DE Y++++ C + I+
Sbjct: 502 ALQKCPQLTLLPYQFEDYVQVSRKIYEILASYTLEVRAVSCDEMYINMSSFCEKYEINDP 561
Query: 66 EI-AEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLP 124
I AE +R + E+ S G+ LLA++ + KP+G F + + FIS
Sbjct: 562 TILAEHIRKVIREKTQCPASVGIGSTSLLARLATRHAKPDGVFWVNAHKKN--EFISEEK 619
Query: 125 IRKIGGIGKVTEHILRDVFG-INTCEEM-LQKGSLLCAVFSHSTADFFLSVGLGLGSTNT 182
++ + G G + L FG I C E+ L+ L VF A L G+
Sbjct: 620 VKDLPGFGYEMMNRLTSFFGDITKCRELQLKTERELVPVFGPKLASKILRQCRGIEEDPD 679
Query: 183 P--QARFRKSISSERTFSVTEDKALLYRKLAEIAEMLSA 219
RKS+S + + + + K E+ ++++A
Sbjct: 680 DFWATHVRKSVSCDINYGIR------FTKRGEVIQLMTA 712
>UNIPROTKB|G5EH81 [details] [associations]
symbol:MGCH7_ch7g688 "Sister chromatid cohesion protein
Eso1" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0003684 GO:GO:0006281 EMBL:CM000230 EMBL:CM001237
GO:GO:0003887 Gene3D:3.30.1490.100 SUPFAM:SSF100879 KO:K03509
InterPro:IPR017061 PIRSF:PIRSF036603 RefSeq:XP_003720794.1
EnsemblFungi:MGG_02924T0 GeneID:2682477 KEGG:mgr:MGG_02924
Uniprot:G5EH81
Length = 668
Score = 132 (51.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
EI ++R +++ TCSAGVA N+LL+K+ S KPN Q V+ AV F+S
Sbjct: 248 EITRDIRQTIFTRLKYTCSAGVAGNKLLSKLGSAHKKPNQQTVIRG--RAVRKFLSDFKF 305
Query: 126 RKIGGIG-KVTEHILRDVFGINTCEEMLQK--GSLLCAVFSHSTADFFLSVGLGLGSTNT 182
KI +G K+ + ++ FG + ++L+ L + STA + + G+ ++
Sbjct: 306 TKIRNLGGKLGDQVVA-AFGTESVSDLLEVPLDQLKLRLGEESTALWVYNTIRGIDNSEV 364
Query: 183 PQARFRKSISSERTF 197
KS+ S ++F
Sbjct: 365 NSRTQIKSMLSAKSF 379
Score = 65 (27.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 450 EERQEHSDFHLAERLQKEESGSDLRILTHRE 480
EE Q+H D+HLA+ LQ EE T R+
Sbjct: 603 EELQDHLDWHLAKDLQDEEERGASAFATRRQ 633
>UNIPROTKB|J3KRG0 [details] [associations]
symbol:POLI "DNA polymerase iota" species:9606 "Homo
sapiens" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017963 Pfam:PF00817 PROSITE:PS50173 GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 EMBL:AC093462 HGNC:HGNC:9182
ChiTaRS:POLI Ensembl:ENST00000580880 Uniprot:J3KRG0
Length = 145
Score = 124 (48.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 51 LDITEVCRERGISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVL 109
+++ +V R + G +IA E+R ++Y + GLT AGVA N+LLAK+ S + KPN Q VL
Sbjct: 85 INLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVL 143
>UNIPROTKB|F1NCM3 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0010225 "response to
UV-C" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 InterPro:IPR017061
PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942 EMBL:AADN02011866
EMBL:AADN02011865 IPI:IPI00818532 Ensembl:ENSGALT00000038044
ArrayExpress:F1NCM3 Uniprot:F1NCM3
Length = 657
Score = 144 (55.7 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 37/135 (27%), Positives = 61/135 (45%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G I EE+R +V + G CSAG++ N++LAK+ +NKPN Q L + R F S +
Sbjct: 184 GAVIVEEIRVAVEKATGFRCSAGISHNKMLAKLACGLNKPNRQ-TLVSSRSVPQLF-SQM 241
Query: 124 PIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSL-LCAVFSHSTADFFLSVGLGLGSTNT 182
P+ I +G + D+ G+ E+ + + L F T + + G+
Sbjct: 242 PVSSIRNLGGKLGVAITDILGVEYIGEVTKFSEMELQTHFGDKTGSWLYDLCRGIDDEPV 301
Query: 183 PQARFRKSISSERTF 197
+SI + F
Sbjct: 302 KNRHLPQSIGCSKNF 316
Score = 49 (22.3 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 433 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 466
D C CG + E EH D+H A LQ+
Sbjct: 596 DQQCCEKCGQYV---LAWELPEHMDYHFAVELQR 626
>UNIPROTKB|F1NAG6 [details] [associations]
symbol:POLH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0000731
"DNA synthesis involved in DNA repair" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0010225 "response to
UV-C" evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0005737 GO:GO:0003684 GO:GO:0010225
GO:GO:0000731 GO:GO:0006301 GO:GO:0003887 GO:GO:0006290
Gene3D:3.30.1490.100 SUPFAM:SSF100879 OMA:SPPLTML
InterPro:IPR017061 PIRSF:PIRSF036603 GeneTree:ENSGT00530000062942
EMBL:AADN02011866 EMBL:AADN02011865 IPI:IPI00596429
Ensembl:ENSGALT00000016798 ArrayExpress:F1NAG6 Uniprot:F1NAG6
Length = 686
Score = 144 (55.7 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 37/135 (27%), Positives = 61/135 (45%)
Query: 64 GIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSL 123
G I EE+R +V + G CSAG++ N++LAK+ +NKPN Q L + R F S +
Sbjct: 184 GAVIVEEIRVAVEKATGFRCSAGISHNKMLAKLACGLNKPNRQ-TLVSSRSVPQLF-SQM 241
Query: 124 PIRKIGGIGKVTEHILRDVFGINTCEEMLQKGSL-LCAVFSHSTADFFLSVGLGLGSTNT 182
P+ I +G + D+ G+ E+ + + L F T + + G+
Sbjct: 242 PVSSIRNLGGKLGVAITDILGVEYIGEVTKFSEMELQTHFGDKTGSWLYDLCRGIDDEPV 301
Query: 183 PQARFRKSISSERTF 197
+SI + F
Sbjct: 302 KNRHLPQSIGCSKNF 316
Score = 49 (22.3 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 433 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQK 466
D C CG + E EH D+H A LQ+
Sbjct: 596 DQQCCEKCGQYV---LAWELPEHMDYHFAVELQR 626
>POMBASE|SPBC16A3.11 [details] [associations]
symbol:eso1 "sister chromatid cohesion protein/DNA
polymerase eta Eso1 fusion protein" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006473
"protein acetylation" evidence=IC] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016407 "acetyltransferase activity"
evidence=ISS] [GO:0019985 "translesion synthesis" evidence=IMP]
[GO:0034087 "establishment of mitotic sister chromatid cohesion"
evidence=IMP] [GO:0034182 "regulation of maintenance of mitotic
sister chromatid cohesion" evidence=TAS] [GO:0043596 "nuclear
replication fork" evidence=IC] InterPro:IPR001126
InterPro:IPR015880 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 SMART:SM00355
PomBase:SPBC16A3.11 GO:GO:0046872 GO:GO:0003684 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0000790 GO:GO:0043596
GO:GO:0016746 GO:GO:0034087 GO:GO:0006473 GO:GO:0003887
GO:GO:0019985 eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879
KO:K03509 EMBL:AB039861 PIR:T39541 RefSeq:NP_596778.1
ProteinModelPortal:O42917 IntAct:O42917 STRING:O42917
EnsemblFungi:SPBC16A3.11.1 GeneID:2539666 KEGG:spo:SPBC16A3.11
OrthoDB:EOG4M0J8V NextBio:20800820 GO:GO:0034182 Uniprot:O42917
Length = 872
Score = 130 (50.8 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 41/142 (28%), Positives = 74/142 (52%)
Query: 66 EIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLPI 125
+I +E+R +Y + TCSAGV+ N +L+K+ S NKPN Q +L + A+ ++ SL I
Sbjct: 221 KIVKEIRDDIYLQLKYTCSAGVSFNPMLSKLVSSRNKPNKQTILTKN--AIQDYLVSLKI 278
Query: 126 RKIGGIG-KVTEHILRDVFGINTCEEMLQKG-SLLCAVFSHSTADFFLSVGLGLGSTN-T 182
I +G K E I+ ++ G ++ +++ L + ++ G+ +T T
Sbjct: 279 TDIRMLGGKFGEEII-NLLGTDSIKDVWNMSMDFLIDKLGQTNGPLVWNLCHGIDNTEIT 337
Query: 183 PQARFRKSISSERTFSVTEDKA 204
Q + KS+ S + FS + K+
Sbjct: 338 TQVQI-KSMLSAKNFSQQKVKS 358
Score = 63 (27.2 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 433 DDYKCSLCGTEMPPSFIEERQEHSDFHLAERLQKEESGSDL 473
+ Y C C ++ + ER EH D+H+A + ++E ++L
Sbjct: 536 ETYTCEECEQKIT---LSERNEHEDYHIALSISRKERYNNL 573
Score = 45 (20.9 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 11 PELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLDEAYLDIT 54
P + T Y + S + K+ P AS+DE ++++T
Sbjct: 111 PNPNYYKTCLDPYRHESVKILNIIKKHAPVVKKASIDECFIELT 154
Score = 39 (18.8 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 412 DITPDNKVGTS---SNQKDQF--IWLD----DYKCSLCGTEMPPSFIEERQEHSDFH 459
++TP+ K T SN D + LD CS C E + E+ HS FH
Sbjct: 621 NLTPNWKKQTPKAISNSSDNMTQLHLDLANSTVTCSECSMEYNSTSEEDILLHSRFH 677
Score = 37 (18.1 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAASLD 47
A+K CPEL T K + K +PN+ LD
Sbjct: 83 AKKKCPELC---TAHVKTWKAGESEAKYHENPNPNYYKTCLD 121
>POMBASE|SPBC1347.01c [details] [associations]
symbol:rev1 "deoxycytidyl transferase Rev1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005819 "spindle" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0017125
"deoxycytidyl transferase activity" evidence=ISO] [GO:0043504
"mitochondrial DNA repair" evidence=IC] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISO] InterPro:IPR001126
InterPro:IPR012112 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PIRSF:PIRSF036573 PROSITE:PS50173
InterPro:IPR001357 PomBase:SPBC1347.01c Pfam:PF00533 GO:GO:0005739
GO:GO:0005730 GO:GO:0005819 GO:GO:0000287 GO:GO:0003684
GO:GO:0006260 EMBL:CU329671 GenomeReviews:CU329671_GR SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0003887 GO:GO:0043504
eggNOG:COG0389 Gene3D:3.30.1490.100 SUPFAM:SSF100879 GO:GO:0017125
KO:K03515 RefSeq:NP_596693.2 ProteinModelPortal:O94623
IntAct:O94623 STRING:O94623 EnsemblFungi:SPBC1347.01c.1
GeneID:2539723 KEGG:spo:SPBC1347.01c OMA:FHIDFDC OrthoDB:EOG49PF6V
NextBio:20800875 Uniprot:O94623
Length = 935
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 52/197 (26%), Positives = 89/197 (45%)
Query: 6 ARKLCPELIFVPTDFTKYTYYSDLTRKVFCKYDPNFMAA-SLDEAYLDITEVCRERGISG 64
A+ LCP L V DF Y S + +++ S+DEA LDIT
Sbjct: 336 AKNLCPSLRVVDYDFGAYESVSREFYTILVNTLHDYIKVISIDEALLDITSSVSSFQ-DC 394
Query: 65 IEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFISSLP 124
EIAE +R+ V E+ S G+ PN LLA++ KP+ + L + V +S L
Sbjct: 395 FEIAESIRSQVREKTNCEVSVGIGPNVLLARLALRKAKPHNVYSLSIEN--VFDVLSPLS 452
Query: 125 IRKIGGIGKVTEHILRDVFGINTCEEM--LQKGSLLCAVFSHSTADFFLSVGLGLGSTNT 182
++ + G+G L +++G+ T ++ ++K +L F + ++ G+ +
Sbjct: 453 VQDLPGVGSSQAQKLFNLYGVRTIGQLQRIEKFNLQ-ETFGVNYGLHLYNISRGIDTDII 511
Query: 183 PQARFRKSISSERTFSV 199
R+SIS + + V
Sbjct: 512 NNETPRRSISVDVNWGV 528
>UNIPROTKB|F1MHR0 [details] [associations]
symbol:POLI "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0005634 GO:GO:0003684 GO:GO:0006281 GO:GO:0003887
Gene3D:3.30.1490.100 SUPFAM:SSF100879 GeneTree:ENSGT00530000062942
OMA:VFYELPE EMBL:DAAA02057088 IPI:IPI00687719
Ensembl:ENSBTAT00000012034 Uniprot:F1MHR0
Length = 701
Score = 144 (55.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 61/236 (25%), Positives = 111/236 (47%)
Query: 6 ARKLCPELIFVP-TDFTKY---TY-YSDLTRKVFCKYDPNFMAASLDEAYLDITEVCRER 60
A++ CP+L+ V D T+Y +Y +++ K + + ++A ++ + R
Sbjct: 96 AKEKCPQLVLVNGEDLTRYREMSYKVTEMVEKRLEQLQSDELSALTVSGHVYNNQPVNPR 155
Query: 61 G------ISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVL-PNDR 113
+ G +I E+R ++Y++ GLT AGVA N+LLAK+ S + KPN Q VL P
Sbjct: 156 DTLHIRLLVGSQIVAEMREAMYQQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESS 215
Query: 114 MAVMTFISSLPIRKIGGIG-KVTEHILRDVFGINTCEEMLQKGS-LLCAVFSHSTADFFL 171
++ ++ I+++ GIG K T+ + + GI++ ++ S +L S A
Sbjct: 216 QELIHSLNH--IKEMPGIGYKTTKRL--EALGISSVRDLQTFPSKVLEKELGISVAQRIQ 271
Query: 172 SVGLGLGSTNTPQARFRKSISSERTF----SVTEDKALLYRKLAEIAEMLSADMQK 223
+ G + + +S S E +F S E K + LA + + D +K
Sbjct: 272 KLSFGEDDSPVTPSGPPQSFSEEDSFKKCSSEVEAKTKIEELLASLLNRVCQDGRK 327
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 456 SDFHLAERLQKEESGSDLRILTHRERCVRTQRDHIASHRKRKKQKLFEK 504
S FH LQ E+ S R ++ V T H R+++ EK
Sbjct: 616 SVFHSFPNLQSEQLLSKNRTTDSHKQPVATVSRHEGLKENREQESPDEK 664
>WB|WBGene00018721 [details] [associations]
symbol:polh-1 species:6239 "Caenorhabditis elegans"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 GO:GO:0005634
GO:GO:0003684 GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 InterPro:IPR017061 PIRSF:PIRSF036603
GeneTree:ENSGT00530000062942 EMBL:FO080224 EMBL:AB244413 PIR:A88395
RefSeq:NP_497480.2 UniGene:Cel.10441 ProteinModelPortal:G5EFY1
SMR:G5EFY1 EnsemblMetazoa:F53A3.2 GeneID:175337
KEGG:cel:CELE_F53A3.2 CTD:175337 WormBase:F53A3.2 OMA:GVGNNKM
NextBio:887718 Uniprot:G5EFY1
Length = 584
Score = 112 (44.5 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 46/182 (25%), Positives = 80/182 (43%)
Query: 50 YLDITEVCRERG---ISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQ 106
Y++ C E I+ + + E++R ++EE CSAGV N+++AK+ +KP Q
Sbjct: 176 YIENARNCTENLLLLIAAVTV-EQIRQQIHEETQFFCSAGVGNNKMMAKLVCARHKPRQQ 234
Query: 107 FVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILRDVFGINTCEEMLQKG-SLLCAVFSHS 165
++P V + PI + G G + ++++ I E+L+ S L F +
Sbjct: 235 TLIP--WFYVREILRLTPIGDVRGFGGKMGNRIQEMLNITLMGELLEVDISQLIETFPNQ 292
Query: 166 TADFFLSVGLGLGSTNTPQARFRKSISSERTF-------SVTEDKALLYRKLAEIAEMLS 218
++ SV G + SI+ + F SV E K L E+A+ L+
Sbjct: 293 H-EYLRSVAEGHCDEPVRPRKESSSIAVSKNFPGKLSIRSVLELKKWLDGLTKELAKRLA 351
Query: 219 AD 220
D
Sbjct: 352 TD 353
Score = 55 (24.4 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 18/74 (24%), Positives = 32/74 (43%)
Query: 427 DQFIWLDDYKCS-LCGTEMPPSFIEERQEHSDFHLAERLQKEESGSDLRILTHRERCVRT 485
D +I++D K S + +PP + Q A L+ + GS R H + +
Sbjct: 510 DNWIFVDGKKFSKMAWRHLPPDIKKHYQHRIALEEARALKSKTGGSRKRAGAHTDNAQKP 569
Query: 486 QRDH-IASHRKRKK 498
++ + S K+KK
Sbjct: 570 KKPKSLESFFKKKK 583
Score = 52 (23.4 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 19 DFTKYTYYSDLTRKVFCKYDPNFMA--ASLDEAYLDITEVCRER 60
D KY S +V YD + AS+DEA+LD++ ++
Sbjct: 87 DIQKYRDASAEVFRVLNNYDSQIIIEKASVDEAFLDLSAYTNQK 130
>UNIPROTKB|Q81NC2 [details] [associations]
symbol:BAS3053 "ImpB/mucB/samB family protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001126 InterPro:IPR017961 InterPro:IPR017963
Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 KO:K03502 OMA:LWFHANG
RefSeq:NP_845581.1 RefSeq:YP_019924.1 RefSeq:YP_029310.1
ProteinModelPortal:Q81NC2 IntAct:Q81NC2 DNASU:1085004
EnsemblBacteria:EBBACT00000009721 EnsemblBacteria:EBBACT00000013537
EnsemblBacteria:EBBACT00000022229 GeneID:1085004 GeneID:2820058
GeneID:2849965 KEGG:ban:BA_3288 KEGG:bar:GBAA_3288 KEGG:bat:BAS3053
ProtClustDB:CLSK2516929 BioCyc:BANT260799:GJAJ-3115-MONOMER
BioCyc:BANT261594:GJ7F-3218-MONOMER Uniprot:Q81NC2
Length = 421
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 41/144 (28%), Positives = 69/144 (47%)
Query: 12 ELIFVPTDFTKYTYYSDLTRKVFCKYDP--NFMAASLDEAYLDITEVCRERGISGIEIAE 69
+++ V Y S+ K+ +Y P +F S+DE ++DIT+ + E A
Sbjct: 77 DILIVNPIMGTYIKCSNYITKLALQYVPIEDFHQYSIDEFFMDITDSIHLFARNPNEFAL 136
Query: 70 ELRTSVYEEAGLTCSAGVAPNRLLAKVCSDIN-KPNGQFVLPNDRMAVMTFISSL-PIRK 127
+ + +YE + C+ G+APN L++KV DI K N V + T + S+ P+ K
Sbjct: 137 QFKREIYEHTRIECTIGIAPNLLMSKVALDIEAKKNKDGVAYWTYEDIPTKLWSIRPLSK 196
Query: 128 IGGIGKVTEHILRDVFGINTCEEM 151
GI TE L GI++ ++
Sbjct: 197 FWGISHKTETKLNQK-GIHSIGDL 219
>TIGR_CMR|BA_3288 [details] [associations]
symbol:BA_3288 "impB/mucB/samB family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0009650 "UV protection"
evidence=ISS] InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003684
GO:GO:0006281 GO:GO:0003887 Gene3D:3.30.1490.100 InterPro:IPR024728
Pfam:PF11798 SUPFAM:SSF100879 HOGENOM:HOG000082710
InterPro:IPR025188 Pfam:PF13438 KO:K03502 OMA:LWFHANG
RefSeq:NP_845581.1 RefSeq:YP_019924.1 RefSeq:YP_029310.1
ProteinModelPortal:Q81NC2 IntAct:Q81NC2 DNASU:1085004
EnsemblBacteria:EBBACT00000009721 EnsemblBacteria:EBBACT00000013537
EnsemblBacteria:EBBACT00000022229 GeneID:1085004 GeneID:2820058
GeneID:2849965 KEGG:ban:BA_3288 KEGG:bar:GBAA_3288 KEGG:bat:BAS3053
ProtClustDB:CLSK2516929 BioCyc:BANT260799:GJAJ-3115-MONOMER
BioCyc:BANT261594:GJ7F-3218-MONOMER Uniprot:Q81NC2
Length = 421
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 41/144 (28%), Positives = 69/144 (47%)
Query: 12 ELIFVPTDFTKYTYYSDLTRKVFCKYDP--NFMAASLDEAYLDITEVCRERGISGIEIAE 69
+++ V Y S+ K+ +Y P +F S+DE ++DIT+ + E A
Sbjct: 77 DILIVNPIMGTYIKCSNYITKLALQYVPIEDFHQYSIDEFFMDITDSIHLFARNPNEFAL 136
Query: 70 ELRTSVYEEAGLTCSAGVAPNRLLAKVCSDIN-KPNGQFVLPNDRMAVMTFISSL-PIRK 127
+ + +YE + C+ G+APN L++KV DI K N V + T + S+ P+ K
Sbjct: 137 QFKREIYEHTRIECTIGIAPNLLMSKVALDIEAKKNKDGVAYWTYEDIPTKLWSIRPLSK 196
Query: 128 IGGIGKVTEHILRDVFGINTCEEM 151
GI TE L GI++ ++
Sbjct: 197 FWGISHKTETKLNQK-GIHSIGDL 219
>UNIPROTKB|P04152 [details] [associations]
symbol:umuC species:83333 "Escherichia coli K-12"
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006974 "response to DNA damage
stimulus" evidence=IEP] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000012 "single strand break repair"
evidence=IMP] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0009432 "SOS response" evidence=IEA]
HAMAP:MF_01113 InterPro:IPR001126 InterPro:IPR017961
InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799 PROSITE:PS50173
GO:GO:0016021 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003684 GO:GO:0000012 GO:GO:0009432
GO:GO:0003887 eggNOG:COG0389 Gene3D:3.30.1490.100
InterPro:IPR024728 Pfam:PF11798 SUPFAM:SSF100879 InterPro:IPR025188
Pfam:PF13438 EMBL:M10107 EMBL:M13387 PIR:E64864 RefSeq:NP_415702.1
RefSeq:YP_489451.1 ProteinModelPortal:P04152 SMR:P04152
DIP:DIP-11090N IntAct:P04152 PRIDE:P04152
EnsemblBacteria:EBESCT00000002958 EnsemblBacteria:EBESCT00000014512
GeneID:12932822 GeneID:946359 KEGG:ecj:Y75_p1156 KEGG:eco:b1184
PATRIC:32117614 EchoBASE:EB1049 EcoGene:EG11056
HOGENOM:HOG000252172 KO:K03502 OMA:SPRYTTQ ProtClustDB:PRK03609
BioCyc:EcoCyc:EG11056-MONOMER BioCyc:ECOL316407:JW1173-MONOMER
BioCyc:MetaCyc:EG11056-MONOMER Genevestigator:P04152 Uniprot:P04152
Length = 422
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 39/136 (28%), Positives = 65/136 (47%)
Query: 21 TKYTYYSDLTRKVFCKYD---PNFMAASLDEAYLDITEVCRERGISGIEIAEELRTSVYE 77
+ Y Y+D++ +V + P S+DEA+ D+T V R ++ + E+R +V +
Sbjct: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DFGREIRATVLQ 129
Query: 78 EAGLTCSAGVAPNRLLAKVCSDINKP-----NGQFVLPN-DRMAVMTFISSLPIRKIGGI 131
LT G+A + LAK+ + K G L N +R + +S+LP+ + GI
Sbjct: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL--MSALPVDDVWGI 187
Query: 132 GKVTEHILRDVFGINT 147
G+ L D GI T
Sbjct: 188 GRRISKKL-DAMGIKT 202
>CGD|CAL0002818 [details] [associations]
symbol:RAD32 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0070987 "error-free translesion synthesis"
evidence=IEA] [GO:0042276 "error-prone translesion synthesis"
evidence=IEA] [GO:0034087 "establishment of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] InterPro:IPR001126
InterPro:IPR017961 InterPro:IPR017963 Pfam:PF00817 Pfam:PF11799
PROSITE:PS50173 CGD:CAL0002818 GO:GO:0003684 GO:GO:0006281
GO:GO:0003887 EMBL:AACQ01000019 eggNOG:COG0389 Gene3D:3.30.1490.100
SUPFAM:SSF100879 KO:K03509 HOGENOM:HOG000065930 RefSeq:XP_720989.1
ProteinModelPortal:Q5AHD1 STRING:Q5AHD1 GeneID:3637340
KEGG:cal:CaO19.866 Uniprot:Q5AHD1
Length = 640
Score = 121 (47.7 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 62 ISGIEIAEELRTSVYEEAGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPNDRMAVMTFIS 121
I G +I E+R ++EE G T SAG+A + +AK+ + KP+ Q ++ N A+ +F++
Sbjct: 249 IIGSQILLEVRKDIFEELGYTTSAGLARTKQVAKLAAGFKKPDAQTIIRNS--AINSFLT 306
Query: 122 SLPIRKIGGIG-KVTEHILRDV 142
+ + + G+G K+ E I+ V
Sbjct: 307 NFELTDVTGMGGKLGESIINKV 328
Score = 46 (21.3 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 436 KCSLCGTEMPPSFIEERQEHSDFHLAERLQKE 467
KCS C +++ EH+D+H+A L +
Sbjct: 610 KCSRCKLS-----VDDPVEHNDYHIAMDLSNK 636
Score = 37 (18.1 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 44 ASLDEAYLDI 53
AS+DE Y+D+
Sbjct: 165 ASVDECYIDL 174
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 522 509 0.00087 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 92
No. of states in DFA: 613 (65 KB)
Total size of DFA: 284 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.72u 0.15s 48.87t Elapsed: 00:00:02
Total cpu time: 48.73u 0.15s 48.88t Elapsed: 00:00:02
Start: Sat May 11 13:39:42 2013 End: Sat May 11 13:39:44 2013