Query 009923
Match_columns 522
No_of_seqs 137 out of 1499
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 15:59:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009923.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009923hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_B T-complex protein 1 sub 100.0 2E-113 7E-118 914.6 58.7 507 10-516 2-513 (513)
2 3iyg_H T-complex protein 1 sub 100.0 4E-113 1E-117 911.9 57.8 506 8-514 1-514 (515)
3 3iyg_A T-complex protein 1 sub 100.0 2E-112 8E-117 909.6 58.2 502 10-515 2-529 (529)
4 3ko1_A Chaperonin; 9-fold symm 100.0 5E-113 2E-117 916.3 48.6 510 6-519 18-538 (553)
5 3ruv_A Chaperonin, CPN; double 100.0 2E-112 7E-117 911.5 53.6 510 5-518 6-523 (543)
6 3iyg_G T-complex protein 1 sub 100.0 7E-112 2E-116 903.0 57.2 501 10-514 1-514 (515)
7 1q3q_A Thermosome alpha subuni 100.0 5E-112 2E-116 909.8 53.4 510 6-519 11-530 (548)
8 1a6d_B Thermosome (beta subuni 100.0 3E-112 1E-116 911.1 52.1 509 6-518 9-527 (543)
9 3p9d_G T-complex protein 1 sub 100.0 3E-113 1E-117 918.0 40.5 513 6-519 12-532 (550)
10 3iyg_D T-complex protein 1 sub 100.0 5E-111 2E-115 897.0 55.8 500 11-514 4-518 (518)
11 1a6d_A Thermosome (alpha subun 100.0 2E-111 8E-116 903.8 50.2 506 6-517 10-525 (545)
12 3p9d_A T-complex protein 1 sub 100.0 2E-111 8E-116 905.4 49.9 510 7-520 13-554 (559)
13 3p9d_B T-complex protein 1 sub 100.0 4E-113 2E-117 915.5 35.8 521 1-522 1-527 (527)
14 3iyg_Z T-complex protein 1 sub 100.0 3E-110 1E-114 889.9 55.1 497 11-513 3-516 (517)
15 3iyg_E T-complex protein 1 sub 100.0 5E-109 2E-113 881.7 58.2 501 11-513 3-514 (515)
16 3p9d_C T-complex protein 1 sub 100.0 8E-111 3E-115 900.8 43.9 507 6-516 7-588 (590)
17 3p9d_H T-complex protein 1 sub 100.0 8E-112 3E-116 910.6 35.5 512 4-519 11-553 (568)
18 3iyg_Q T-complex protein 1 sub 100.0 4E-109 1E-113 881.8 56.3 500 9-514 1-512 (512)
19 3p9d_D T-complex protein 1 sub 100.0 6E-111 2E-115 897.2 40.5 510 1-514 1-528 (528)
20 3p9d_F T-complex protein 1 sub 100.0 8E-111 3E-115 900.7 39.2 515 1-518 1-541 (546)
21 3p9d_E T-complex protein 1 sub 100.0 2E-109 7E-114 890.8 48.1 510 6-516 31-560 (562)
22 3aq1_B Thermosome subunit; gro 100.0 4E-102 1E-106 825.2 40.9 468 49-520 7-482 (500)
23 1we3_A CPN60(groel); chaperoni 100.0 1.4E-93 4.8E-98 763.3 44.1 458 13-518 5-529 (543)
24 1kp8_A Groel protein; chaperon 100.0 1E-92 3.5E-97 755.4 40.8 456 13-518 5-527 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 1.1E-93 3.7E-98 763.6 32.4 457 13-518 6-529 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 8.3E-92 2.8E-96 746.3 34.4 457 13-520 5-527 (546)
27 1gml_A T-complex protein 1 sub 100.0 1.1E-36 3.7E-41 279.3 17.2 172 199-371 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 2.7E-31 9.2E-36 238.5 13.3 153 205-358 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 98.3 4.6E-06 1.6E-10 74.9 12.3 143 203-386 3-170 (194)
30 3osx_A 60 kDa chaperonin; alph 98.3 1.5E-05 5E-10 71.8 13.7 140 206-386 13-177 (201)
31 1srv_A Protein (groel (HSP60 c 98.1 1.5E-05 5.2E-10 68.1 9.4 109 207-340 1-133 (145)
32 1o13_A Probable NIFB protein; 52.6 31 0.001 28.9 6.5 52 267-319 67-118 (136)
33 2yx6_A Hypothetical protein PH 48.7 38 0.0013 27.4 6.4 52 267-319 54-105 (121)
34 1eo1_A Hypothetical protein MT 47.6 52 0.0018 26.7 7.1 52 268-320 57-108 (124)
35 1rdu_A Conserved hypothetical 43.9 66 0.0023 25.6 7.1 52 268-320 54-105 (116)
36 2wfb_A Putative uncharacterize 42.8 48 0.0016 26.7 6.1 50 268-318 59-109 (120)
37 2re2_A Uncharacterized protein 32.8 73 0.0025 26.5 5.7 50 268-319 71-120 (136)
38 2ooa_A E3 ubiquitin-protein li 28.8 1.1E+02 0.0037 21.0 4.8 34 101-134 13-49 (52)
39 2ln3_A De novo designed protei 25.3 1.8E+02 0.0062 20.5 6.3 47 265-323 15-61 (83)
40 2qtd_A Uncharacterized protein 21.0 1.8E+02 0.0062 22.5 5.8 47 270-318 50-96 (105)
No 1
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.9e-113 Score=914.57 Aligned_cols=507 Identities=68% Similarity=1.048 Sum_probs=487.6
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC----CCeEEecChHHHhhhccccChHHHHHHHHHhhcccc
Q 009923 10 EANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG----REVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDE 84 (522)
Q Consensus 10 ~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~----g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~~~ 84 (522)
++++.+|.++|.+|+.||..|+++|||||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++||++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e 81 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDE 81 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhh
Confidence 5678899999999999999999999999999999999 54 789999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhccccch
Q 009923 85 VGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQ 164 (522)
Q Consensus 85 ~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~ 164 (522)
+||||||+++|+++||+++.+++.+|+||+.|++||++|.+.+++.|+++++|++.+.+.+++.|.++++|+++||+.++
T Consensus 82 ~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~ 161 (513)
T 3iyg_B 82 VGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTH 161 (513)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999874321235789999999999999999
Q ss_pred hhhHHHHHHHHHHHhhcCCCCCcCeEEEEecCCCCcCcceeeeEEEeccCCCCCCccccCcceEEeecccccccccccCe
Q 009923 165 DKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGA 244 (522)
Q Consensus 165 ~~~~la~lv~~a~~~~~~~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~~~~~~i~~~rIll~~~~L~~~~~~~~~~ 244 (522)
++++|++++++|+..+++++|+++|+|++++||++.||++++|++|++++.+.||++++||+|++++++|++++++..++
T Consensus 162 ~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~m~~~~en~kIll~~~~Le~~k~e~~~~ 241 (513)
T 3iyg_B 162 HKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGS 241 (513)
T ss_pred chHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCCCceeecCceEEEEcCCcccccccccCC
Confidence 99999999999999998888889999999999999999999999999998777999999999999999999999883357
Q ss_pred EEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccc
Q 009923 245 RVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIAST 324 (522)
Q Consensus 245 ~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~ 324 (522)
++.+++++++.++.+.|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++.+|+|||++|||+++++
T Consensus 242 ~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~ 321 (513)
T 3iyg_B 242 RVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIAST 321 (513)
T ss_pred ceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCEEecc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchH
Q 009923 325 FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPE 404 (522)
Q Consensus 325 ~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E 404 (522)
++++++.++|+|+.|+++.+|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|++++++++|||||++|
T Consensus 322 l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e 401 (513)
T 3iyg_B 322 FDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSE 401 (513)
T ss_pred cccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcccccccCCcc
Q 009923 405 MVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGIS 484 (522)
Q Consensus 405 ~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gi~ 484 (522)
++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|||+.+|++.||++.|||
T Consensus 402 ~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~ 481 (513)
T 3iyg_B 402 MLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGIT 481 (513)
T ss_pred HHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCE
Confidence 99999999999989999999999999999999999999999999999999999998888899999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhhHHHhcCCC
Q 009923 485 ESFKVKQAVLLSATEAAEMILRVDEIITCAPR 516 (522)
Q Consensus 485 dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~ 516 (522)
||+.||+++|+.|+|+|+||||||++|...|+
T Consensus 482 dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 482 ESFQVKRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999998774
No 2
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.7e-113 Score=911.92 Aligned_cols=506 Identities=35% Similarity=0.539 Sum_probs=486.1
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcccc
Q 009923 8 RDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDE 84 (522)
Q Consensus 8 ~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~~~ 84 (522)
++|+++.+|.+++.+|+.||..|++++||||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++||++
T Consensus 1 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (515)
T 3iyg_H 1 KEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAE 80 (515)
T ss_pred CCCccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhce
Confidence 478889999999999999999999999999999999999 66 999999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCC-chhhhHHHHHHHHHHHhhccccc
Q 009923 85 VGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKE-NAETFKSDLMKIAMTTLSSKILS 163 (522)
Q Consensus 85 ~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~-~~~~~~~~l~~i~~t~l~sk~~~ 163 (522)
+||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++. +.+..++.|.++++|+++||+.+
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s 160 (515)
T 3iyg_H 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLIS 160 (515)
T ss_pred eCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999863 22222467899999999999999
Q ss_pred hhhhHHHHHHHHHHHhhcCCCCCcCeEEEEecCCCCcCcceeeeEEEeccCCC----CCCccccCcceEEeecccccccc
Q 009923 164 QDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI----GQPKRIENAKILVANTAMDTDKV 239 (522)
Q Consensus 164 ~~~~~la~lv~~a~~~~~~~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~----~~~~~i~~~rIll~~~~L~~~~~ 239 (522)
.++++|++++++|+..+++++|+++|+|++++||++.||++++|++|++++.+ .+|+.++||+|++++++|+++++
T Consensus 161 ~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 161 QQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred ccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEccccccccc
Confidence 99999999999999999888888999999999999999999999999999864 35899999999999999999998
Q ss_pred cccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCC
Q 009923 240 KIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 319 (522)
Q Consensus 240 ~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa 319 (522)
+.. +++.+++++++.++.+.|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++++|+|||++|||
T Consensus 241 e~~-~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa 319 (515)
T 3iyg_H 241 KDN-AEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGG 319 (515)
T ss_pred ccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCC
Confidence 874 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCCCCCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccccC
Q 009923 320 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFG 399 (522)
Q Consensus 320 ~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpG 399 (522)
+++++++++++.++|+|+.|++..+|+++|++|+||.++++|||+|||+|+.+++|.||+++||++++|++++++++|||
T Consensus 320 ~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpG 399 (515)
T 3iyg_H 320 SIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAG 399 (515)
T ss_pred EEeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcccccc
Q 009923 400 GGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMA 479 (522)
Q Consensus 400 GG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~ 479 (522)
||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|||+.+|++.||.
T Consensus 400 GGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~ 479 (515)
T 3iyg_H 400 GGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNF 479 (515)
T ss_pred CcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccH
Confidence 99999999999999999999999999999999999999999999999999999999999987778899999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcC
Q 009923 480 ELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 514 (522)
Q Consensus 480 ~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~ 514 (522)
+.|||||+.||+++|+.|+|+|+||||||++|++.
T Consensus 480 ~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 480 EAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred hccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999754
No 3
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.2e-112 Score=909.61 Aligned_cols=502 Identities=37% Similarity=0.565 Sum_probs=478.6
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcccccC
Q 009923 10 EANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVG 86 (522)
Q Consensus 10 ~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~~~~G 86 (522)
++++.+|.++|.+|+.||..|++++||||||+||+|| ++ |+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~G 81 (529)
T 3iyg_A 2 FGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVG 81 (529)
T ss_pred CcchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhC
Confidence 3567899999999999999999999999999999999 66 99999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh-cccccCCchhhhHHHHHHHHHHHhhccccchh
Q 009923 87 DGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ-KVVDNKENAETFKSDLMKIAMTTLSSKILSQD 165 (522)
Q Consensus 87 DGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~-~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~ 165 (522)
|||||+++|+++||+++.+|+.+|+||+.|++||++|++.+++.|++ +++|++..+ ++.|.++++|+++||+.+++
T Consensus 82 DGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~---~e~l~~va~tsl~sK~~~~~ 158 (529)
T 3iyg_A 82 DGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELG---RDCLINAAKTSMSSKVIGIN 158 (529)
T ss_pred CChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHhccCccccc
Confidence 99999999999999999999999999999999999999999999998 999887422 47899999999999999999
Q ss_pred hhHHHHHHHHHHHhhc---C----CCCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccccCcceEEeecccccc
Q 009923 166 KEHFGQLAVDAVMRLK---G----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTD 237 (522)
Q Consensus 166 ~~~la~lv~~a~~~~~---~----~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~~~rIll~~~~L~~~ 237 (522)
+++|++++++|+..++ . ++|+++|+|++++|+++.||++++|++|++++.+ .||+.++||||++++++|+++
T Consensus 159 ~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~~ 238 (529)
T 3iyg_A 159 GDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKT 238 (529)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCcccc
Confidence 9999999999999885 1 3457789999999999999999999999999754 689999999999999999999
Q ss_pred cccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHh
Q 009923 238 KVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 317 (522)
Q Consensus 238 ~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~t 317 (522)
+++. ++++.+++++++..+.+.|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++++|+|||++|
T Consensus 239 k~e~-~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~t 317 (529)
T 3iyg_A 239 KMKL-GVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKAS 317 (529)
T ss_pred cccC-CceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHh
Confidence 9887 478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeccccCCCC------CCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHh
Q 009923 318 GGEIASTFDNPE------SVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTV 391 (522)
Q Consensus 318 Ga~ii~~~~~l~------~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~ 391 (522)
||++++++++++ +.++|+|+.|++..+|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|+++
T Consensus 318 Ga~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v 397 (529)
T 3iyg_A 318 GATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVL 397 (529)
T ss_pred CCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999987664 56799999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCC--------
Q 009923 392 NDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEG-------- 463 (522)
Q Consensus 392 ~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~-------- 463 (522)
+++++||||||+|++||.+|++++.++++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++
T Consensus 398 ~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~ 477 (529)
T 3iyg_A 398 ESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNL 477 (529)
T ss_pred hCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999997665
Q ss_pred CceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCC
Q 009923 464 CPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAP 515 (522)
Q Consensus 464 ~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~ 515 (522)
.++|||+.+|++.||.+.|||||+.+|+++|+.|+|+|+||||||++|...|
T Consensus 478 ~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 478 KWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred ceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 6899999999999999999999999999999999999999999999998754
No 4
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=4.8e-113 Score=916.27 Aligned_cols=510 Identities=35% Similarity=0.576 Sum_probs=477.2
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcc
Q 009923 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQD 82 (522)
Q Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~ 82 (522)
+|++++++.+|.++|.+|+.||..|+++||+||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++||
T Consensus 18 ~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd 97 (553)
T 3ko1_A 18 ILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQD 97 (553)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHHHHHTCS
T ss_pred EEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHHHHhhCCc
Confidence 68999999999999999999999999999999999999999 66 9999999999999999999999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhcccc
Q 009923 83 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKIL 162 (522)
Q Consensus 83 ~~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~ 162 (522)
+++||||||+++|+++||+++.+|+.+|+||+.|++||++|++.++++|+++++|++.++ ++.|.++++|+++||+.
T Consensus 98 ~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d---~e~L~~vA~tsl~sK~~ 174 (553)
T 3ko1_A 98 EETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSIND---TDLLRKIAMTSLSSKAV 174 (553)
T ss_dssp SSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTC---HHHHHHHHHHHHTTSSC
T ss_pred ccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCc---HHHHHHHHHHHhhHHhh
Confidence 999999999999999999999999999999999999999999999999999999987422 57899999999999999
Q ss_pred chhhhHHHHHHHHHHHhhcCC------CCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccccCcceEEeecccc
Q 009923 163 SQDKEHFGQLAVDAVMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMD 235 (522)
Q Consensus 163 ~~~~~~la~lv~~a~~~~~~~------~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~~~rIll~~~~L~ 235 (522)
+.++++|++++++|+..++++ +|+++|+|++++|+++.||++++|++|++++.+ .||+.++||||++++++|+
T Consensus 175 ~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~d~~Le 254 (553)
T 3ko1_A 175 AGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDASLE 254 (553)
T ss_dssp CTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEEECSCBS
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccccceEEEecCccc
Confidence 999999999999999998753 678899999999999999999999999999854 6999999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009923 236 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 315 (522)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~ 315 (522)
+++++.. +++.+++++++.++.+.|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++++|+|||+
T Consensus 255 ~~k~e~~-~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~leria~ 333 (553)
T 3ko1_A 255 VEKPELD-AEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLAR 333 (553)
T ss_dssp CCCCTTT-CCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHHHHHT
T ss_pred ccCcccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHHHHHH
Confidence 9988874 678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCc
Q 009923 316 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 395 (522)
Q Consensus 316 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 395 (522)
+|||+++++++++++.++|+|+.|++..+|+++|++|+||.+++.|||+|||+|+.+++|.||+++|||+++|+++++++
T Consensus 334 ~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~ 413 (553)
T 3ko1_A 334 ATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADVIKDGR 413 (553)
T ss_dssp TTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred hhCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCC-CceeEEcCCCc
Q 009923 396 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEG-CPAGIDVISGS 474 (522)
Q Consensus 396 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~-~~~Gid~~~g~ 474 (522)
+|||||++|++|+.+|++++..+++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+++ .++|||+.+|+
T Consensus 414 iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~ 493 (553)
T 3ko1_A 414 AIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQ 493 (553)
T ss_dssp EEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTE
T ss_pred eecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCC
Confidence 99999999999999999999889999999999999999999999999999999999999999997766 78999999999
Q ss_pred ccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCCC
Q 009923 475 VGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 519 (522)
Q Consensus 475 ~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~~~~ 519 (522)
+.||++.|||||+.||+++|+.|+|+|++|||||++|...|.+.|
T Consensus 494 ~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~ 538 (553)
T 3ko1_A 494 PVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGG 538 (553)
T ss_dssp EEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC------
T ss_pred chHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccC
Confidence 999999999999999999999999999999999999999887644
No 5
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.1e-112 Score=911.46 Aligned_cols=510 Identities=34% Similarity=0.556 Sum_probs=488.4
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhc
Q 009923 5 RIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQ 81 (522)
Q Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~ 81 (522)
-+|++++++.+|.++|.+|+.||..|+++||+||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++|
T Consensus 6 ~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~q 85 (543)
T 3ruv_A 6 GVLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVAKTQ 85 (543)
T ss_dssp CSSCSSEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred eeecCCcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999999 66 999999999999999999999999999999999
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhccc
Q 009923 82 DDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKI 161 (522)
Q Consensus 82 ~~~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~ 161 (522)
|+++||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++.++ ++.|.++++|+++||+
T Consensus 86 d~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d---~~~L~~va~tsl~sK~ 162 (543)
T 3ruv_A 86 EKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQD---KEILTKIAMTSITGKG 162 (543)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC---HHHHHHHHHHHHHHTC
T ss_pred HhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC---HHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999999999999999999999987422 5789999999999999
Q ss_pred cchhhhHHHHHHHHHHHhhcCC---CCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccccCcceEEeecccccc
Q 009923 162 LSQDKEHFGQLAVDAVMRLKGS---TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTD 237 (522)
Q Consensus 162 ~~~~~~~la~lv~~a~~~~~~~---~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~~~rIll~~~~L~~~ 237 (522)
.+.++++|++++++|+..++++ +|+++|+|++++|+++.||++++|++|++++.+ .||+.++||||++++++|+++
T Consensus 163 ~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~~Le~~ 242 (543)
T 3ruv_A 163 AEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIK 242 (543)
T ss_dssp GGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEESSCBSCC
T ss_pred cchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcEEEEEccccccc
Confidence 9999999999999999999755 678899999999999999999999999999854 689999999999999999999
Q ss_pred cccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHh
Q 009923 238 KVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 317 (522)
Q Consensus 238 ~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~t 317 (522)
+++.. +++.+++++++.++.+.|+++++.++++|.+.+++||+++++|++.+++||.++||++++++++++|+|||++|
T Consensus 243 k~e~~-~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia~~t 321 (543)
T 3ruv_A 243 ETETD-AEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKAT 321 (543)
T ss_dssp CCSSC-CCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHH
T ss_pred ccccC-ceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHHHHh
Confidence 88874 78999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeccccCCCCCCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccc
Q 009923 318 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVL 397 (522)
Q Consensus 318 Ga~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vv 397 (522)
||+++++++++++.++|+|+.|++..+|+++|++|++|.+++.|||+|||+|+.+++|.||+++||++++|++++++++|
T Consensus 322 Ga~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iV 401 (543)
T 3ruv_A 322 GANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIV 401 (543)
T ss_dssp CCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEE
T ss_pred CCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHh-cCCCceeEEcCCCccc
Q 009923 398 FGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQ-KEGCPAGIDVISGSVG 476 (522)
Q Consensus 398 pGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~-~~~~~~Gid~~~g~~~ 476 (522)
||||++|++|+.+|++++.++++++|+++++|++||+.||++|++|||+|+.+++.+|+..|. +++.++|||+.+|++.
T Consensus 402 pGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~ 481 (543)
T 3ruv_A 402 SGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVE 481 (543)
T ss_dssp ETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEE
T ss_pred cCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999999999997 6778999999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCC
Q 009923 477 DMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRR 518 (522)
Q Consensus 477 d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~~~ 518 (522)
||++.|||||+.||+++|+.|+|+|++|||||++|...|.+.
T Consensus 482 dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~ 523 (543)
T 3ruv_A 482 DMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRG 523 (543)
T ss_dssp ETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC----
T ss_pred cHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCC
Confidence 999999999999999999999999999999999999988753
No 6
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.9e-112 Score=903.04 Aligned_cols=501 Identities=29% Similarity=0.475 Sum_probs=478.4
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcccccC
Q 009923 10 EANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVG 86 (522)
Q Consensus 10 ~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~~~~G 86 (522)
++++++|.++|.+|+.||+.|++++||||||+||+|| ++ |+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 1 ~~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~G 80 (515)
T 3iyg_G 1 NTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVG 80 (515)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhC
Confidence 3567899999999999999999999999999999999 66 99999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhccccchhh
Q 009923 87 DGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDK 166 (522)
Q Consensus 87 DGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~ 166 (522)
|||||+|+||++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++++|+++||..+.+.
T Consensus 81 DGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~~~l~~va~tsl~sK~i~~~~ 157 (515)
T 3iyg_G 81 DGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSN---RDTMLNIINSSITTKVISRWS 157 (515)
T ss_pred CChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCC---HHHHHHHHHHHhcCCchhhHH
Confidence 99999999999999999999999999999999999999999999999999987532 478999999999999999999
Q ss_pred hHHHHHHHHHHHhhcC------CCCCc-CeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccccCcceEEeeccccccc
Q 009923 167 EHFGQLAVDAVMRLKG------STNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTDK 238 (522)
Q Consensus 167 ~~la~lv~~a~~~~~~------~~~~~-~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~~~rIll~~~~L~~~~ 238 (522)
+++++++++|+..+.. ++|++ +|+|++++||+++||++++|++|++++.+ .||+.++||||++++|+|++++
T Consensus 158 ~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k 237 (515)
T 3iyg_G 158 SLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK 237 (515)
T ss_pred HHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEcccccccc
Confidence 9999999999988751 13444 49999999999999999999999999865 5999999999999999999999
Q ss_pred ccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhC
Q 009923 239 VKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTG 318 (522)
Q Consensus 239 ~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tG 318 (522)
++.. +++.+++++++.++.+.|++++++++++|.+.+++||+++++|++.+++||.++||++++++++++|+|||++||
T Consensus 238 ~e~~-~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tG 316 (515)
T 3iyg_G 238 GESQ-TDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACG 316 (515)
T ss_pred cccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhC
Confidence 8874 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeccccCCCCCCCccc-cceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccc
Q 009923 319 GEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVL 397 (522)
Q Consensus 319 a~ii~~~~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vv 397 (522)
|+++++++++++.++|+ |+.|++..+|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|++++++++|
T Consensus 317 a~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~iv 396 (515)
T 3iyg_G 317 ARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLV 396 (515)
T ss_pred CeeeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEE
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcC-CCceeEEcCCCccc
Q 009923 398 FGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE-GCPAGIDVISGSVG 476 (522)
Q Consensus 398 pGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~-~~~~Gid~~~g~~~ 476 (522)
||||++|++++.+|++++...++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.++ +.++|||+.+|++.
T Consensus 397 pGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~ 476 (515)
T 3iyg_G 397 PGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLV 476 (515)
T ss_pred eCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999754 46789999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcC
Q 009923 477 DMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 514 (522)
Q Consensus 477 d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~ 514 (522)
||++.|||||+.||+++|+.|+|+|+||||||++|...
T Consensus 477 d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 477 DMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred ccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 99999999999999999999999999999999999764
No 7
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=4.6e-112 Score=909.80 Aligned_cols=510 Identities=37% Similarity=0.582 Sum_probs=488.5
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcc
Q 009923 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQD 82 (522)
Q Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~ 82 (522)
+|+++++..+|.++|.+|+.||.+|+++|||||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++||
T Consensus 11 ~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd 90 (548)
T 1q3q_A 11 ILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQD 90 (548)
T ss_dssp CSCTTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHH
T ss_pred cccCCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHHHHHHhcC
Confidence 68999999999999999999999999999999999999999 66 9999999999999999999999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhcccc
Q 009923 83 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKIL 162 (522)
Q Consensus 83 ~~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~ 162 (522)
+++||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++++|+++||+.
T Consensus 91 ~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d---~~~l~~va~tsl~sKi~ 167 (548)
T 1q3q_A 91 KEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDD---EETLLKIAATSITGKNA 167 (548)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC---HHHHHHHHHHHSCSSTT
T ss_pred CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHhhcccc
Confidence 999999999999999999999999999999999999999999999999999999987422 47899999999999999
Q ss_pred chhhhHHHHHHHHHHHhhcCC------CCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccccCcceEEeecccc
Q 009923 163 SQDKEHFGQLAVDAVMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMD 235 (522)
Q Consensus 163 ~~~~~~la~lv~~a~~~~~~~------~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~~~rIll~~~~L~ 235 (522)
++++++|++++++|+..++++ +|+++|+|++++|++++||++++|++|++++.+ .||++++||||++++++|+
T Consensus 168 ~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le 247 (548)
T 1q3q_A 168 ESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALE 247 (548)
T ss_dssp GGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEEECSCBS
T ss_pred ccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEEEEecCcC
Confidence 999999999999999998643 677899999999999999999999999999865 6899999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009923 236 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 315 (522)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~ 315 (522)
+++++.. +++.+++++++..+.+.|+++++.++++|.+.+++||+++++|++.+++||.++||++++++++++|+|||+
T Consensus 248 ~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~ 326 (548)
T 1q3q_A 248 VKKTETD-AKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAK 326 (548)
T ss_dssp CCCCSSC-CCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHH
T ss_pred cccccCC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHHHHHHH
Confidence 9998875 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCc
Q 009923 316 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 395 (522)
Q Consensus 316 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 395 (522)
+|||++++++++++++++|+|+.|++..+|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|+++++++
T Consensus 327 ~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ 406 (548)
T 1q3q_A 327 ATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGA 406 (548)
T ss_dssp HHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred HhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcc
Q 009923 396 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV 475 (522)
Q Consensus 396 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~ 475 (522)
+|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|||+.+|++
T Consensus 407 ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~ 486 (548)
T 1q3q_A 407 VLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKP 486 (548)
T ss_dssp EEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEE
T ss_pred cccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCc
Confidence 99999999999999999999888999999999999999999999999999999999999999997677789999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCCC
Q 009923 476 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 519 (522)
Q Consensus 476 ~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~~~~ 519 (522)
.||.+.|||||+.+|+++|+.|+|+|++|||||++|...|++++
T Consensus 487 ~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~ 530 (548)
T 1q3q_A 487 ADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATKPE 530 (548)
T ss_dssp EETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC----
T ss_pred cchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 99999999999999999999999999999999999999887644
No 8
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=3.1e-112 Score=911.11 Aligned_cols=509 Identities=34% Similarity=0.569 Sum_probs=476.2
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcc
Q 009923 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQD 82 (522)
Q Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~ 82 (522)
+|+++++..+|.++|.+|+.||.+|+++|||||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++||
T Consensus 9 ~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd 88 (543)
T 1a6d_B 9 ILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQD 88 (543)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHHHTCTT
T ss_pred hcCCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHHHHhcC
Confidence 67999999999999999999999999999999999999999 66 9999999999999999999999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhcccc
Q 009923 83 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKIL 162 (522)
Q Consensus 83 ~~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~ 162 (522)
+++||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++++|+++||+.
T Consensus 89 ~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~---~~~l~~va~tsl~sKi~ 165 (543)
T 1a6d_B 89 SFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADE---KALLLKMAQTSLNSKSA 165 (543)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTH---HHHHHHHHHHHHTTSGG
T ss_pred CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999999999999999999999999999987532 47899999999999999
Q ss_pred chhhhHHHHHHHHHHHhhcCC------CCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccccCcceEEeecccc
Q 009923 163 SQDKEHFGQLAVDAVMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMD 235 (522)
Q Consensus 163 ~~~~~~la~lv~~a~~~~~~~------~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~~~rIll~~~~L~ 235 (522)
++++++|++++++|+..++++ +|+++|+|++++|++++||++++|++|++++.+ .||++++||||++++++|+
T Consensus 166 ~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le 245 (543)
T 1a6d_B 166 SVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLE 245 (543)
T ss_dssp GGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBS
T ss_pred cccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEEEecccc
Confidence 999999999999999998643 567889999999999999999999999999865 5899999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009923 236 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 315 (522)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~ 315 (522)
+++++.. +++.+++++++..+.+.|+++++.++++|.+.+++||+++++|++.+++||.++||++++++++++|+|||+
T Consensus 246 ~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le~ia~ 324 (543)
T 1a6d_B 246 IKKPEFD-TNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAK 324 (543)
T ss_dssp CCCCSSE-EEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHH
T ss_pred cccccCC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHHHHHH
Confidence 9998874 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCc
Q 009923 316 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 395 (522)
Q Consensus 316 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 395 (522)
+|||++++++++++++++|+|+.|++..+|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|+++++++
T Consensus 325 ~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ 404 (543)
T 1a6d_B 325 ATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGA 404 (543)
T ss_dssp HHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred HhCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcc
Q 009923 396 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV 475 (522)
Q Consensus 396 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~ 475 (522)
+|||||++|++|+.+|++++...++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|||+.+|++
T Consensus 405 ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~ 484 (543)
T 1a6d_B 405 YAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEI 484 (543)
T ss_dssp EEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEE
T ss_pred ccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcc
Confidence 99999999999999999999989999999999999999999999999999999999999999998777899999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCC
Q 009923 476 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRR 518 (522)
Q Consensus 476 ~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~~~ 518 (522)
.||.+.|||||+.+|+++|+.|+|+|++|||||++|...|++.
T Consensus 485 ~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~ 527 (543)
T 1a6d_B 485 EDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSS 527 (543)
T ss_dssp EETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC------
T ss_pred cchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCC
Confidence 9999999999999999999999999999999999999887643
No 9
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=3.3e-113 Score=917.97 Aligned_cols=513 Identities=34% Similarity=0.524 Sum_probs=486.1
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcc
Q 009923 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQD 82 (522)
Q Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~ 82 (522)
+|++++++.+|.+++.+|+.||..|+++||+||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++||
T Consensus 12 ~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd 91 (550)
T 3p9d_G 12 VLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDISRAQD 91 (550)
T ss_dssp ----CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHHHHHHHHH
T ss_pred hhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999 65 9999999999999999999999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhcccc
Q 009923 83 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKIL 162 (522)
Q Consensus 83 ~~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~ 162 (522)
+++||||||+++||++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++.++..+++.|.++++|+++||+.
T Consensus 92 ~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~ 171 (550)
T 3p9d_G 92 AEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLI 171 (550)
T ss_dssp TTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTT
T ss_pred hhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccc
Confidence 99999999999999999999999999999999999999999999999999999998653222246799999999999999
Q ss_pred chhhhHHHHHHHHHHHhhc-CCCCCcCeEEEEecCCCCcCcceeeeEEEeccCCC----CCCccccCcceEEeecccccc
Q 009923 163 SQDKEHFGQLAVDAVMRLK-GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI----GQPKRIENAKILVANTAMDTD 237 (522)
Q Consensus 163 ~~~~~~la~lv~~a~~~~~-~~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~----~~~~~i~~~rIll~~~~L~~~ 237 (522)
+.++++|+++++||+..++ +++|+++|.|++++|++++||++++|++|++++.+ .||++++||+|++++++|+++
T Consensus 172 ~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kIll~~~~Le~~ 251 (550)
T 3p9d_G 172 HNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELELK 251 (550)
T ss_dssp GGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCEEEECSCCSCC
T ss_pred cccHhHHHHHHHHHHHHhCccccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCceEEEeccccccc
Confidence 9999999999999999998 67889999999999999999999999999999753 689999999999999999999
Q ss_pred cccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHh
Q 009923 238 KVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVT 317 (522)
Q Consensus 238 ~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~t 317 (522)
+++. ++++.+++++++.++.+.|+++++.++++|.+.+++||+++++|++.+++||.++||++++++++++|+|||++|
T Consensus 252 k~e~-~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~~lerIa~~t 330 (550)
T 3p9d_G 252 AEKD-NAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDMNRVIQAV 330 (550)
T ss_dssp CCSS-CEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTTHHHHHHHHT
T ss_pred cccc-cceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHHHHHHHHHHh
Confidence 8876 478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeccccCCCCCCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccc
Q 009923 318 GGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVL 397 (522)
Q Consensus 318 Ga~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vv 397 (522)
||+++++++++++.++|+|+.|++..+|+++|++|+||+++++|||+|||+|+.+++|.||+++|||+++|++++++++|
T Consensus 331 Ga~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iV 410 (550)
T 3p9d_G 331 GGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIV 410 (550)
T ss_dssp CCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEE
T ss_pred CCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcccc
Q 009923 398 FGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGD 477 (522)
Q Consensus 398 pGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d 477 (522)
||||++|++|+.+|++++..+++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.++++++|||+.+|++.|
T Consensus 411 pGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~d 490 (550)
T 3p9d_G 411 AGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGD 490 (550)
T ss_dssp ETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCC
T ss_pred cCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999878889999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCCC
Q 009923 478 MAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 519 (522)
Q Consensus 478 ~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~~~~ 519 (522)
|++.|||||+.||+++|+.|+|+|++||+||++|...|++++
T Consensus 491 m~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~ 532 (550)
T 3p9d_G 491 NFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESA 532 (550)
T ss_dssp HHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC--
T ss_pred hHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCcccc
Confidence 999999999999999999999999999999999999887654
No 10
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5e-111 Score=897.01 Aligned_cols=500 Identities=33% Similarity=0.529 Sum_probs=480.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcccccCC
Q 009923 11 ANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGD 87 (522)
Q Consensus 11 ~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~~~~GD 87 (522)
.+..+|.++|.+|+.||..++++||+||||+||+|| .+ |+++|||||+||||+|+++||+|+|++++|++||+++||
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GD 83 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGD 83 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCC
Confidence 456789999999999999999999999999999999 66 999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhccccchhhh
Q 009923 88 GTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKE 167 (522)
Q Consensus 88 Gtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~ 167 (522)
||||+++||++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++++|+++||+.+++.+
T Consensus 84 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~~~l~~vA~tsl~sK~~~~~~~ 160 (518)
T 3iyg_D 84 GTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSD---RETLLNSAATSLNSKVVSQYSS 160 (518)
T ss_pred CceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCC---hHHHHHHhHhhhccccchhhHH
Confidence 9999999999999999999999999999999999999999999999999987422 4789999999999999999999
Q ss_pred HHHHHHHHHHHhhcC-----CCCCcCeEEEEecCCCCcCcceeeeEEEeccCCCCCCccccCcceEEeeccccccccccc
Q 009923 168 HFGQLAVDAVMRLKG-----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIY 242 (522)
Q Consensus 168 ~la~lv~~a~~~~~~-----~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~~~~~~i~~~rIll~~~~L~~~~~~~~ 242 (522)
+|++++++|+..+++ .+++++|+|++++||+..||++++|++|++++.++||++++||||++++|+|++++++.
T Consensus 161 ~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~~- 239 (518)
T 3iyg_D 161 LLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDM- 239 (518)
T ss_pred HHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEecccccCCCccccCceEEEEEeecccccccc-
Confidence 999999999999864 36778899999999999999999999999998668999999999999999999999884
Q ss_pred CeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEe-----CCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHh
Q 009923 243 GARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVN-----RQLIYNFPEELFADAGILAIEHADFDGIERLALVT 317 (522)
Q Consensus 243 ~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~-----~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~t 317 (522)
+.++.+++++++..+.+.|+++++.++++|.+.|++||++ +++|++.+++||.++||++++++++.+|+|||++|
T Consensus 240 ~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~t 319 (518)
T 3iyg_D 240 DNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTI 319 (518)
T ss_pred CceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHHh
Confidence 5789999999999999999999999999999999999999 78999999999999999999999999999999999
Q ss_pred CCeeccccCCCCCCCccccceEEEEEEcC-eEEEEEecccC-CceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCc
Q 009923 318 GGEIASTFDNPESVKLGHCKLIEEIMIGE-DKLIHFSGVEM-GQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 395 (522)
Q Consensus 318 Ga~ii~~~~~l~~~~lG~~~~v~~~~ig~-~~~~~~~~~~~-~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 395 (522)
||+++++++++++.++|+|+.|++..+|+ ++|++|++|++ +++|||+|||+|+.+++|.||+++||++++|+++++++
T Consensus 320 Ga~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~ 399 (518)
T 3iyg_D 320 GTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRA 399 (518)
T ss_pred CCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999 89999999988 89999999999999999999999999999999999999
Q ss_pred cccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcc
Q 009923 396 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV 475 (522)
Q Consensus 396 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~ 475 (522)
+|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|||+.+|++
T Consensus 400 iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~ 479 (518)
T 3iyg_D 400 LIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGI 479 (518)
T ss_pred EeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888889999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcC
Q 009923 476 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 514 (522)
Q Consensus 476 ~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~ 514 (522)
.||++.|||||+.||+++|+.|+|+|+||||||++|+++
T Consensus 480 ~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 480 SNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred cchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 999999999999999999999999999999999999864
No 11
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.3e-111 Score=903.77 Aligned_cols=506 Identities=35% Similarity=0.571 Sum_probs=477.8
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcc
Q 009923 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQD 82 (522)
Q Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~ 82 (522)
+|+++++..+|+++|.+|+.||..|+++|||||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++||
T Consensus 10 ~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd 89 (545)
T 1a6d_A 10 VLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQD 89 (545)
T ss_dssp -------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGGCTT
T ss_pred ccCCcchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHHhcC
Confidence 67999999999999999999999999999999999999999 66 9999999999999999999999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhcccc
Q 009923 83 DEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKIL 162 (522)
Q Consensus 83 ~~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~ 162 (522)
+++||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++| +.+ ++.|.++++|+++||+.
T Consensus 90 ~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~----~~~l~~va~tsl~sKi~ 164 (545)
T 1a6d_A 90 TAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STD----DATLRKIALTALSGKNT 164 (545)
T ss_dssp TCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCC----HHHHHHHHHHHTTTSSC
T ss_pred CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCC----HHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999999999999999999999 512 57899999999999999
Q ss_pred chhhhHHHHHHHHHHHhhcCC------CCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccccCcceEEeecccc
Q 009923 163 SQDKEHFGQLAVDAVMRLKGS------TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMD 235 (522)
Q Consensus 163 ~~~~~~la~lv~~a~~~~~~~------~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~~~rIll~~~~L~ 235 (522)
++++++|++++++|+..++++ +|+++|+|++++|++++||++++|++|++++.+ .||++++||||++++++|+
T Consensus 165 ~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le 244 (545)
T 1a6d_A 165 GLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALE 244 (545)
T ss_dssp CSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEECSCBS
T ss_pred cccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEecCCC
Confidence 999999999999999998643 667899999999999999999999999999865 6899999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009923 236 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 315 (522)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~ 315 (522)
+++++.. +++.+++++++..+.+.|+++++.++++|.+.+++||+++++|++.+++||.++||++++++++++|+|||+
T Consensus 245 ~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~ 323 (545)
T 1a6d_A 245 IKKTEIE-AKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAK 323 (545)
T ss_dssp CCCCSSC-CEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHHHH
T ss_pred cccccCC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHHHH
Confidence 9998875 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCc
Q 009923 316 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 395 (522)
Q Consensus 316 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 395 (522)
+|||++++++++++++++|+|+.|++..+|+++|++|++|.++++|||+|||+|+.+++|.||+++||++++|+++++++
T Consensus 324 ~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~ 403 (545)
T 1a6d_A 324 ATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGK 403 (545)
T ss_dssp HHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred HhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcc
Q 009923 396 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV 475 (522)
Q Consensus 396 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~ 475 (522)
+|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+++.++|||+.+|++
T Consensus 404 iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~ 483 (545)
T 1a6d_A 404 FLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGV 483 (545)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEE
T ss_pred EEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCcc
Confidence 99999999999999999999989999999999999999999999999999999999999999998777789999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCC
Q 009923 476 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRR 517 (522)
Q Consensus 476 ~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~~ 517 (522)
.||.+.|||||+.+|+++|+.|+|+|++||+||++|...|++
T Consensus 484 ~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 484 GDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp EEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred ccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 999999999999999999999999999999999999987765
No 12
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.3e-111 Score=905.38 Aligned_cols=510 Identities=35% Similarity=0.530 Sum_probs=487.6
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhccc
Q 009923 7 FRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQDD 83 (522)
Q Consensus 7 ~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~~ 83 (522)
|+++.+..+|.++|.+|+.||..|+++|||||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++|++
T Consensus 13 ~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~ 92 (559)
T 3p9d_A 13 LFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDR 92 (559)
T ss_dssp CCSSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 6888899999999999999999999999999999999999 66 99999999999999999999999999999999999
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhh-cccccCCchhhhHHHHHHHHHHHhhcccc
Q 009923 84 EVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ-KVVDNKENAETFKSDLMKIAMTTLSSKIL 162 (522)
Q Consensus 84 ~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~-~~~~~~~~~~~~~~~l~~i~~t~l~sk~~ 162 (522)
++||||||+++||++||+++.+++.+|+||+.|++||++|++.+++.|++ +++|++..+ ++.|.++++|+++||+.
T Consensus 93 e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~---~e~L~~vA~tsl~sK~~ 169 (559)
T 3p9d_A 93 EIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLG---KETLINIAKTSMSSKII 169 (559)
T ss_dssp HTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC-----CTTHHHHHHHTTSSSGG
T ss_pred HcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999 999987521 25799999999999999
Q ss_pred chhhhHHHHHHHHHHHhhc-------CCCCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-CCCcccc--CcceEEeec
Q 009923 163 SQDKEHFGQLAVDAVMRLK-------GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIE--NAKILVANT 232 (522)
Q Consensus 163 ~~~~~~la~lv~~a~~~~~-------~~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~--~~rIll~~~ 232 (522)
++++++|++|+++|+..++ +.+++++|+|++++|++++||++++|++|++++.+ .||+.++ ||||+++++
T Consensus 170 ~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~ 249 (559)
T 3p9d_A 170 GADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDL 249 (559)
T ss_dssp GTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEETT
T ss_pred cchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceeeccCCceEEEEec
Confidence 9999999999999999987 23678889999999999999999999999999754 5899999 999999999
Q ss_pred ccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHH
Q 009923 233 AMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIER 312 (522)
Q Consensus 233 ~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ 312 (522)
+|++++++. ++++.+++++++..+.+.|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++.+|+|
T Consensus 250 ~Le~~k~e~-~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ 328 (559)
T 3p9d_A 250 NLQKARMAM-GVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRR 328 (559)
T ss_dssp CCSCCCCCT-TCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHH
T ss_pred ccccccccc-CceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHH
Confidence 999998887 4789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeecccc------CCCCCCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHH
Q 009923 313 LALVTGGEIASTF------DNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCV 386 (522)
Q Consensus 313 ia~~tGa~ii~~~------~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~ 386 (522)
||++|||++++++ +++++.++|+|+.|++..+++++|++|+||.++++|||+|||+|+.+++|.||+++||+++
T Consensus 329 ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~ 408 (559)
T 3p9d_A 329 IARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSV 408 (559)
T ss_dssp HHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999998 7888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCccccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCC--
Q 009923 387 LSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGC-- 464 (522)
Q Consensus 387 ~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~-- 464 (522)
+|++++++++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.+++.
T Consensus 409 ~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~ 488 (559)
T 3p9d_A 409 VKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAK 488 (559)
T ss_dssp HHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC
T ss_pred HHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999976654
Q ss_pred ----------ceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCCCC
Q 009923 465 ----------PAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRED 520 (522)
Q Consensus 465 ----------~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~~~~~ 520 (522)
++|||+.+|++.||++.|||||+.||+++|+.|+|+|+||||||++|...|+++++
T Consensus 489 ~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 554 (559)
T 3p9d_A 489 PEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPKE 554 (559)
T ss_dssp ----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCCC
T ss_pred ccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCccccc
Confidence 79999999999999999999999999999999999999999999999998877643
No 13
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=4.5e-113 Score=915.49 Aligned_cols=521 Identities=62% Similarity=0.946 Sum_probs=491.3
Q ss_pred CcccccccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc--c-C-CCeEEecChHHHhhhccccChHHHHHHH
Q 009923 1 MGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG--R-G-REVTVTNDGATILKSLHIDNPAAKVLVD 76 (522)
Q Consensus 1 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~--~-~-g~~~iTnDg~tIlk~l~~~hP~a~ll~~ 76 (522)
|++. +|+++++..+|+++|.+|+.||..|+++||+||||+||+|| . . |+++|||||+||||+|+++||+|+|+++
T Consensus 1 ~~~~-~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e 79 (527)
T 3p9d_B 1 MSVQ-IFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVN 79 (527)
T ss_dssp --CC-SSCSCEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHH
T ss_pred Ccee-hhcCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHH
Confidence 7888 89999999999999999999999999999999999999999 5 5 9999999999999999999999999999
Q ss_pred HHhhcccccCCCchhHHHHHHHHHHHHHHHHHc-CCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHH
Q 009923 77 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAA-KIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMT 155 (522)
Q Consensus 77 ~~~~~~~~~GDGtts~vlL~~~Ll~~~~~li~~-gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t 155 (522)
+|++||+++||||||+++||++||+++.+++.+ |+||+.|++||++|.+.+++.|+++++|+..+++.+++.|.++++|
T Consensus 80 ~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~t 159 (527)
T 3p9d_B 80 ISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKT 159 (527)
T ss_dssp HHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHh
Confidence 999999999999999999999999999999999 9999999999999999999999999999886544445789999999
Q ss_pred HhhccccchhhhHHHHHHHHHHHhhcCCCCCcCeEEEEecCCCCcCcceeeeEEEeccCCCCCCccccCcceEEeecccc
Q 009923 156 TLSSKILSQDKEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMD 235 (522)
Q Consensus 156 ~l~sk~~~~~~~~la~lv~~a~~~~~~~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~~~~~~i~~~rIll~~~~L~ 235 (522)
+++||+.++++++|++|+++|+..++++++++.|+|+++.||++.||++++|++|++++.+.+|++++||+|++++|+|+
T Consensus 160 Sl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~p~~~~n~kIlll~~~le 239 (527)
T 3p9d_B 160 TLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQPKRIENAKILIANTTLD 239 (527)
T ss_dssp HHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSCCSCCSSCEEEEECSCSS
T ss_pred ccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCCCCCeeeecceEEEeccccc
Confidence 99999999999999999999999998888888999999999999999999999999998766689999999999999999
Q ss_pred cccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHH
Q 009923 236 TDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLAL 315 (522)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~ 315 (522)
+++++..+.++.+++++++..+.+.|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++.+|+|||+
T Consensus 240 ~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia~ 319 (527)
T 3p9d_B 240 TDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLAL 319 (527)
T ss_dssp CCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHHH
T ss_pred cccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHHH
Confidence 99988545678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCc
Q 009923 316 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSR 395 (522)
Q Consensus 316 ~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~ 395 (522)
+|||+++++++++++.++|+|+.|+++.+|+++|++|+||+++++|||+|||+|+.+++|.||+++||++++|+++++++
T Consensus 320 ~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~ 399 (527)
T 3p9d_B 320 VTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETR 399 (527)
T ss_dssp HTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCC
T ss_pred HhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcc
Q 009923 396 VLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSV 475 (522)
Q Consensus 396 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~ 475 (522)
+|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.++++++|||+.+|++
T Consensus 400 iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~ 479 (527)
T 3p9d_B 400 TVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTI 479 (527)
T ss_dssp EEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTC
T ss_pred cccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCC
Confidence 99999999999999999999888999999999999999999999999999999999999999998888899999999999
Q ss_pred cccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCCC-CCC
Q 009923 476 GDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE-DRM 522 (522)
Q Consensus 476 ~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~~~~-~~~ 522 (522)
.||++.|||||+.||+++|+.|+|+|+||||||++|...|++++ +||
T Consensus 480 ~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~~~~ 527 (527)
T 3p9d_B 480 ADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRTANRQHM 527 (527)
T ss_dssp CCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC---------
T ss_pred cchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcccCCCCC
Confidence 99999999999999999999999999999999999999887644 344
No 14
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3e-110 Score=889.86 Aligned_cols=497 Identities=29% Similarity=0.469 Sum_probs=477.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcccccCC
Q 009923 11 ANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGD 87 (522)
Q Consensus 11 ~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~~~~GD 87 (522)
++..+|.+++.+|+.||++|++++||||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++|++++||
T Consensus 3 ~~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GD 82 (517)
T 3iyg_Z 3 AEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGD 82 (517)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCC
Confidence 456799999999999999999999999999999999 66 999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhccccchhhh
Q 009923 88 GTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKE 167 (522)
Q Consensus 88 Gtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~ 167 (522)
||||+++|+++||+++.+++.+|+||+.|++||++|.+.+++.|+++++|++.+ ++.|.++++|+++||+.+.+.+
T Consensus 83 GTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~----~~~L~~va~tsl~sKi~~~~~d 158 (517)
T 3iyg_Z 83 GTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMD----RETLIDVARTSLRTKVHAELAD 158 (517)
T ss_pred CceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCC----HHHHHHHHHHHhccccchhHHH
Confidence 999999999999999999999999999999999999999999999999988744 4789999999999999999999
Q ss_pred HHHHHHHHHHHhhcC---CCCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccccCcceEEeecccccccccccC
Q 009923 168 HFGQLAVDAVMRLKG---STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKIYG 243 (522)
Q Consensus 168 ~la~lv~~a~~~~~~---~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~~~rIll~~~~L~~~~~~~~~ 243 (522)
+|+++++||+..+.. ++|+++|+|++++||+..||++++|++|++++.+ .||+.++||+|++++++|++++++..
T Consensus 159 ~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~~- 237 (517)
T 3iyg_Z 159 VLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVN- 237 (517)
T ss_pred HHHHHHHHHhheeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccccCCeEEEecccccccccccc-
Confidence 999999999988743 4678899999999999999999999999999854 59999999999999999999998875
Q ss_pred eEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCc---------EEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHH
Q 009923 244 ARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGIN---------CFVNRQLIYNFPEELFADAGILAIEHADFDGIERLA 314 (522)
Q Consensus 244 ~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~---------lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia 314 (522)
+++.+++++++..+.+.|+++++..+++|...+++ ||+++++|++.+++||.++||++++++++++|+|||
T Consensus 238 ~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leria 317 (517)
T 3iyg_Z 238 SGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLT 317 (517)
T ss_pred eeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHHH
Confidence 78999999999999999999999999999988877 599999999999999999999999999999999999
Q ss_pred HHhCCeeccccCCCCCCC-ccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhC
Q 009923 315 LVTGGEIASTFDNPESVK-LGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVND 393 (522)
Q Consensus 315 ~~tGa~ii~~~~~l~~~~-lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~ 393 (522)
++|||+++++++++++++ +|+|+ |++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++||++++|+++++
T Consensus 318 ~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~ 396 (517)
T 3iyg_Z 318 LACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDD 396 (517)
T ss_pred HHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999 99999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCC
Q 009923 394 SRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG 473 (522)
Q Consensus 394 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g 473 (522)
+++|||||++|++|+.+|++++.+.++++|+++++|++||+.+|++|++|||+|+.+++.+|++.|.+++.++|||+.+|
T Consensus 397 ~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 476 (517)
T 3iyg_Z 397 GCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTG 476 (517)
T ss_pred ceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCC
Confidence 99999999999999999999999899999999999999999999999999999999999999999987788999999999
Q ss_pred cccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhc
Q 009923 474 SVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITC 513 (522)
Q Consensus 474 ~~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~ 513 (522)
++.||++.|||||+.||+++|+.|+|+|+||||||++|.+
T Consensus 477 ~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 477 EPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred cccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999975
No 15
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.3e-109 Score=881.72 Aligned_cols=501 Identities=35% Similarity=0.516 Sum_probs=478.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcccccCC
Q 009923 11 ANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGD 87 (522)
Q Consensus 11 ~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~~~~GD 87 (522)
+++.+|.++|.+|+.||..|+++||+||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++|++++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GD 82 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGD 82 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 457899999999999999999999999999999999 66 999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhccccchhhh
Q 009923 88 GTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKE 167 (522)
Q Consensus 88 Gtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~ 167 (522)
||||+++||++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++.+. .+++.|.++++|+++||+.+.+.+
T Consensus 83 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~-~~~~~l~~vA~tsl~sK~i~~~~~ 161 (515)
T 3iyg_E 83 GTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDM-KNTEPLIQTAKTTLGSKVVNSCHR 161 (515)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCc-cCHHHHHHHHHHHhcccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999886421 114789999999999999999999
Q ss_pred HHHHHHHHHHHhhcC----CCCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccccCcceEEeeccccccccccc
Q 009923 168 HFGQLAVDAVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKIY 242 (522)
Q Consensus 168 ~la~lv~~a~~~~~~----~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~~~rIll~~~~L~~~~~~~~ 242 (522)
+|+++++||+..+.. ++++++|+|++++||++.||++++|++|++++.+ .||+.++||+|++++|||++.+++.
T Consensus 162 ~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~- 240 (515)
T 3iyg_E 162 QMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKT- 240 (515)
T ss_pred HHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcCccccccccc-
Confidence 999999999998854 3678899999999999999999999999999864 5899999999999999999988876
Q ss_pred CeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeec
Q 009923 243 GARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIA 322 (522)
Q Consensus 243 ~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii 322 (522)
++++.+++++++..+.+.|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++.+|+|||++|||+++
T Consensus 241 ~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ii 320 (515)
T 3iyg_E 241 KHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGRIV 320 (515)
T ss_pred cceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEe
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccceEEEEEEcC--eEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccccCC
Q 009923 323 STFDNPESVKLGHCKLIEEIMIGE--DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGG 400 (522)
Q Consensus 323 ~~~~~l~~~~lG~~~~v~~~~ig~--~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGG 400 (522)
++++++++.++|+|+.|+++.+|+ ++|++|+||++++.|||+|||+|+.+++|.||+++||++++|++++++++||||
T Consensus 321 ~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGG 400 (515)
T 3iyg_E 321 PRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGG 400 (515)
T ss_pred cccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCC
Confidence 999999999999999999999997 899999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhc-CCCceeEEcCCCcccccc
Q 009923 401 GWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK-EGCPAGIDVISGSVGDMA 479 (522)
Q Consensus 401 G~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~-~~~~~Gid~~~g~~~d~~ 479 (522)
|++|++|+.+|++++.++++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+ ++.++|||+.+|++.||+
T Consensus 401 Ga~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~ 480 (515)
T 3iyg_E 401 GAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMK 480 (515)
T ss_pred cHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchH
Confidence 9999999999999999999999999999999999999999999999999999999999975 457899999999999999
Q ss_pred cCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhc
Q 009923 480 ELGISESFKVKQAVLLSATEAAEMILRVDEIITC 513 (522)
Q Consensus 480 ~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~ 513 (522)
+.|||||+.||+++|+.|+|+|+||||||++|.+
T Consensus 481 ~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 481 HQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred hccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 9999999999999999999999999999999976
No 16
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=8.2e-111 Score=900.79 Aligned_cols=507 Identities=28% Similarity=0.468 Sum_probs=480.1
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcc
Q 009923 6 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQD 82 (522)
Q Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~ 82 (522)
+|++++++.+|.++|.+|+.||..|+++|++||||+||+|| .+ |+++|||||+||||+|+++||+|+|++++|++||
T Consensus 7 ~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e~a~~qd 86 (590)
T 3p9d_C 7 FMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELSRTQD 86 (590)
T ss_dssp CSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHHHTTTHH
T ss_pred eecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHHHHHhhh
Confidence 67999999999999999999999999999999999999999 65 9999999999999999999999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHH-HHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhccc
Q 009923 83 DEVGDGTTSVVVLAGELLREAEKL-VAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKI 161 (522)
Q Consensus 83 ~~~GDGtts~vlL~~~Ll~~~~~l-i~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~ 161 (522)
+++||||||+++||++||+++.+| +.+|+||+.|++||++|++.++++|+++++|++..+ ++.|.++++|+++||+
T Consensus 87 ~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~e~L~~vA~tslsSK~ 163 (590)
T 3p9d_C 87 EEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVEN---DAAMKKLIQASIGTKY 163 (590)
T ss_dssp HHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCC---THHHHHHHTTTSTTST
T ss_pred hhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCC---HHHHHHHHHHHHhccc
Confidence 999999999999999999999999 999999999999999999999999999999987532 3689999999999999
Q ss_pred cchhhhHHHHHHHHHHHhhcCC------------CCCc-CeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccccCcce
Q 009923 162 LSQDKEHFGQLAVDAVMRLKGS------------TNLE-SIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKI 227 (522)
Q Consensus 162 ~~~~~~~la~lv~~a~~~~~~~------------~~~~-~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~~~rI 227 (522)
.++++++|++++++|+..++++ .|++ +|+|++++||++.||++++|++|++++.+ .||+.++||+|
T Consensus 164 ~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~~en~kI 243 (590)
T 3p9d_C 164 VIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRV 243 (590)
T ss_dssp TGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCSCEESCCE
T ss_pred ccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcceeeeeEE
Confidence 9999999999999999998653 2332 69999999999999999999999999765 59999999999
Q ss_pred EEeecccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCCh
Q 009923 228 LVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADF 307 (522)
Q Consensus 228 ll~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~ 307 (522)
++++++|++++++. ++++.+++++++.++.+.|++++++++++|.+.+++||+++++|++.+++||.++||++++++++
T Consensus 244 ll~d~~Le~~K~e~-~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~~~~k 322 (590)
T 3p9d_C 244 VLLDCPLEYKKGES-QTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRVKK 322 (590)
T ss_dssp ECCCCCCSCCCCTT-TEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCCCCCH
T ss_pred EEEccccccccccc-CceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeeccCCH
Confidence 99999999999887 47889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCeeccccCCCCCCCccc-cceEEEEEEcCeEEEEEecccCCce--------------------------
Q 009923 308 DGIERLALVTGGEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVEMGQA-------------------------- 360 (522)
Q Consensus 308 ~~L~~ia~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~~~~~-------------------------- 360 (522)
.+|+|||++|||+++++++++++.++|+ |+.|++..+|+++|++|+||.+++.
T Consensus 323 ~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 402 (590)
T 3p9d_C 323 SDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVS 402 (590)
T ss_dssp HHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC--------------------------------
T ss_pred HHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHH
Confidence 9999999999999999999999999999 9999999999999999999987666
Q ss_pred ------------------------------EEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHH
Q 009923 361 ------------------------------CTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKE 410 (522)
Q Consensus 361 ------------------------------~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~ 410 (522)
|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++++.+
T Consensus 403 i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~ 482 (590)
T 3p9d_C 403 AANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVK 482 (590)
T ss_dssp -------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcccccccCCcccchHHH
Q 009923 411 VDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVK 490 (522)
Q Consensus 411 L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk 490 (522)
|++++..+++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.++++++|||+.+|++.||++.|||||+.||
T Consensus 483 L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk 562 (590)
T 3p9d_C 483 LAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIK 562 (590)
T ss_dssp HHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHH
T ss_pred HHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHH
Confidence 99999999999999999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhcCCC
Q 009923 491 QAVLLSATEAAEMILRVDEIITCAPR 516 (522)
Q Consensus 491 ~~~l~~A~e~~~~iL~iD~iI~~~~~ 516 (522)
+++|+.|+|+|+||||||++|...|+
T Consensus 563 ~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 563 QQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp HHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999988774
No 17
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=7.7e-112 Score=910.64 Aligned_cols=512 Identities=27% Similarity=0.436 Sum_probs=472.9
Q ss_pred cccccchhhhhhh-HHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHh
Q 009923 4 ERIFRDEANEEKG-ERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISK 79 (522)
Q Consensus 4 ~~~~~~~~~~~~g-~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~ 79 (522)
..+|++|+++.+| +++|.+|+.||..|+++|||||||+||+|| ++ |+++|||||+|||++|+++||+|+||+++|+
T Consensus 11 ~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~ 90 (568)
T 3p9d_H 11 AGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMATE 90 (568)
T ss_dssp CSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHHHH
T ss_pred hhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHH
Confidence 4578999999998 579999999999999999999999999999 66 9999999999999999999999999999999
Q ss_pred hcccccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhc
Q 009923 80 VQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSS 159 (522)
Q Consensus 80 ~~~~~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~s 159 (522)
+|++++||||||+++|+++||+++.+++.+|+||+.|++||++|++.++++|+++++++..+. ..++.|.++++|+++|
T Consensus 91 ~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~-~~~~~l~~va~tsl~s 169 (568)
T 3p9d_H 91 QQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDK-NDKNELLKMIKPVISS 169 (568)
T ss_dssp HHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCC-CTTHHHHHHHHHHHTT
T ss_pred hhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCC-CCHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999999998763210 1147899999999999
Q ss_pred cccchhhhHHHHHHHHHHHhhcC---------CCCCcCeEEEEecCCCCcCcceeeeEEEeccCCCCCCcccc---Ccce
Q 009923 160 KILSQDKEHFGQLAVDAVMRLKG---------STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIE---NAKI 227 (522)
Q Consensus 160 k~~~~~~~~la~lv~~a~~~~~~---------~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~~~~~~i~---~~rI 227 (522)
|+.+++ ++|++|+++|+..+++ ++|+++|+|++++|++++||++++|++|++++ ..||++++ ||||
T Consensus 170 K~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~-~~m~~~i~~~~n~kI 247 (568)
T 3p9d_H 170 KKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREP-EGHVKSLSEDKKHKV 247 (568)
T ss_dssp TSTTCH-HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCB-SSGGGSCCCCSSCEE
T ss_pred cCcchH-HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeecc-cCCcEEEecCCcceE
Confidence 999888 9999999999998865 26778999999999999999999999999997 47999999 9999
Q ss_pred EEeecccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCCh
Q 009923 228 LVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADF 307 (522)
Q Consensus 228 ll~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~ 307 (522)
++++|+|++++++.. +++.+++++++.++.+.|+++++.++++|.+.+++||+++++|++.+++||.++||++++++++
T Consensus 248 lll~~~Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~v~~ 326 (568)
T 3p9d_H 248 AVFTCPLDIANTETK-GTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPSK 326 (568)
T ss_dssp EEECSCSSSCCCSSS-CEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECCCCH
T ss_pred EEEccCccccccccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEecCCH
Confidence 999999999998774 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEeccc--CCceEEEEecCCCHHHHHHHHHHHhHHHH
Q 009923 308 DGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVE--MGQACTIVLRGASHHVLDEAERSLHDALC 385 (522)
Q Consensus 308 ~~L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~--~~~~~TIll~G~t~~~l~e~~~~i~dal~ 385 (522)
.+|+|||++|||+++++++++++.++|+|+.|++..+|+++|++|++|+ ++++|||+|||+|+.+++|.||+++|||+
T Consensus 327 ~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DAL~ 406 (568)
T 3p9d_H 327 FELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVA 406 (568)
T ss_dssp HHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998 68999999999999999999999999999
Q ss_pred HHHHHhh--CCccccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhc--
Q 009923 386 VLSQTVN--DSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK-- 461 (522)
Q Consensus 386 ~~~~~~~--~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~-- 461 (522)
++|++++ ++++|||||++|++|+.+|++++.+.++++|+++++||+||+.||++|++|||+|+.+++.+|+..|.+
T Consensus 407 vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 486 (568)
T 3p9d_H 407 AVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTE 486 (568)
T ss_dssp HHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSS
T ss_pred HHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhc
Confidence 9999998 899999999999999999999999999999999999999999999999999999999999999998865
Q ss_pred ------CCCceeEEcCCCc---ccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCCC
Q 009923 462 ------EGCPAGIDVISGS---VGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRE 519 (522)
Q Consensus 462 ------~~~~~Gid~~~g~---~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~~~~ 519 (522)
++.++|||+.+|+ +.||.+.|||||+.||+++|+.|+|+|++|||||++|...|...|
T Consensus 487 ~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~ 553 (568)
T 3p9d_H 487 PGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGP 553 (568)
T ss_dssp CCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC---------------
T ss_pred ccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCC
Confidence 5678999999997 999999999999999999999999999999999999999887643
No 18
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.4e-109 Score=881.77 Aligned_cols=500 Identities=28% Similarity=0.424 Sum_probs=474.7
Q ss_pred chhhhhhh-HHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhhcccc
Q 009923 9 DEANEEKG-ERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDE 84 (522)
Q Consensus 9 ~~~~~~~g-~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~~~ 84 (522)
||+++.+| ++++.+|+.||..|+++||+||||+||+|| .+ |+++|||||+||||+|+++||+|+|++++|++|+++
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQE 80 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhh
Confidence 57889999 899999999999999999999999999999 66 999999999999999999999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhccc--ccCCchhhhHHHHHHHHHHHhhcccc
Q 009923 85 VGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVV--DNKENAETFKSDLMKIAMTTLSSKIL 162 (522)
Q Consensus 85 ~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~--~~~~~~~~~~~~l~~i~~t~l~sk~~ 162 (522)
+||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++ +.+.++ ++.|.++++|+++||+.
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~---~~~l~~va~tsl~sK~~ 157 (512)
T 3iyg_Q 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRD---VDEVSSLLHTSVMSKQY 157 (512)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC---HHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999999999999999999999999999854 222211 47899999999999986
Q ss_pred chhhhHHHHHHHHHHHhhcCC---CCCcCeEEEEecCCCCcCcceeeeEEEeccCCCCCCccccCcceEEeecccccccc
Q 009923 163 SQDKEHFGQLAVDAVMRLKGS---TNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKV 239 (522)
Q Consensus 163 ~~~~~~la~lv~~a~~~~~~~---~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~~~~~~i~~~rIll~~~~L~~~~~ 239 (522)
+ ++++|++++++|+..++++ +++++|+|.+++||++.||++++|++|++++.+ ||+.++||+|+++++||++.++
T Consensus 158 ~-~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~-~~~~~~n~kI~ll~~~le~~~~ 235 (512)
T 3iyg_Q 158 G-NEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG-DVTSVKDAKIAVYSCPFDGMIT 235 (512)
T ss_pred c-chHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC-CCcccccCceEEEecccccccc
Confidence 5 6899999999999998653 677899999999999999999999999999854 9999999999999999999888
Q ss_pred cccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCC
Q 009923 240 KIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 319 (522)
Q Consensus 240 ~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa 319 (522)
+.. .++.+++++++.++.+.|++++++++++|.+.|++||+++++|++.+++||.+.||++++++++.+|+|||++|||
T Consensus 236 e~k-~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~tGa 314 (512)
T 3iyg_Q 236 ETK-GTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGA 314 (512)
T ss_pred ccc-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCC
Confidence 775 6789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCCCCCCccccceEEEEEEcCeEEEEEeccc-CCceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCcccc
Q 009923 320 EIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVE-MGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLF 398 (522)
Q Consensus 320 ~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~-~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvp 398 (522)
+++++++++++.++|+|++|++..+|+++|++|++|+ .+++|||+|||+|+.+++|.||+++|||+++|++++++++||
T Consensus 315 ~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVp 394 (512)
T 3iyg_Q 315 TALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVP 394 (512)
T ss_pred EEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEec
Confidence 9999999999999999999999999999999999997 478999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCC--ccc
Q 009923 399 GGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISG--SVG 476 (522)
Q Consensus 399 GGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g--~~~ 476 (522)
|||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.++++++|||+.+| ++.
T Consensus 395 GGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~ 474 (512)
T 3iyg_Q 395 GGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVK 474 (512)
T ss_pred CCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCccc
Confidence 999999999999999999899999999999999999999999999999999999999999988888999999965 999
Q ss_pred ccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcC
Q 009923 477 DMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 514 (522)
Q Consensus 477 d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~ 514 (522)
||++.|||||+.||+++|+.|+|+|+||||||++|.++
T Consensus 475 d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 475 DMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMAK 512 (512)
T ss_pred chHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheecC
Confidence 99999999999999999999999999999999999753
No 19
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=6.4e-111 Score=897.18 Aligned_cols=510 Identities=32% Similarity=0.490 Sum_probs=484.2
Q ss_pred Cccc-ccccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHH
Q 009923 1 MGVE-RIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVD 76 (522)
Q Consensus 1 ~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~ 76 (522)
||.. .-|+.+.+..+|.++|.+|+.||..|+++|++||||+||+|| .+ |+++|||||+||||+|+++||+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e 80 (528)
T 3p9d_D 1 MSAKVPSNATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVE 80 (528)
T ss_dssp ------CCCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHH
T ss_pred CCCCcccccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHH
Confidence 5533 245777788999999999999999999999999999999999 65 9999999999999999999999999999
Q ss_pred HHhhcccccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHH
Q 009923 77 ISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTT 156 (522)
Q Consensus 77 ~~~~~~~~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~ 156 (522)
+|++||+++||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++..+ ++.|.++++|+
T Consensus 81 ~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~e~l~~va~ts 157 (528)
T 3p9d_D 81 VSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSD---REQLVRAASTS 157 (528)
T ss_dssp HHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCC---HHHHHHHHHHH
T ss_pred HHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCC---HHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999987422 47899999999
Q ss_pred hhccccchhhhHHHHHHHHHHHhhcC----CCCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-C-CCccccCcceEEe
Q 009923 157 LSSKILSQDKEHFGQLAVDAVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-G-QPKRIENAKILVA 230 (522)
Q Consensus 157 l~sk~~~~~~~~la~lv~~a~~~~~~----~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~-~~~~i~~~rIll~ 230 (522)
++||+.++++++|++++++|+..+++ .+++++|+|++++|++++||++++|++|++++.+ . ||+.++||||+++
T Consensus 158 l~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~ 237 (528)
T 3p9d_D 158 LSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLI 237 (528)
T ss_dssp SCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEE
T ss_pred hcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEEE
Confidence 99999999999999999999999864 4677899999999999999999999999999853 3 9999999999999
Q ss_pred ecccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCC-----CchHHHHHHHcCCeEEecC
Q 009923 231 NTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLI-----YNFPEELFADAGILAIEHA 305 (522)
Q Consensus 231 ~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i-----~~~~~~~l~~~~I~~i~~v 305 (522)
+++|++++++.. +++.+++++++..+.+.|+++++.++++|.+.|++||+++++| ++.+++||.++||++++++
T Consensus 238 ~~~le~~k~~~~-~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~ 316 (528)
T 3p9d_D 238 QFQISPPKPDTE-NNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDI 316 (528)
T ss_dssp CCCSSCCCCSSE-EEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECC
T ss_pred eccccccccccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeC
Confidence 999999988774 7899999999999999999999999999999999999999999 9999999999999999999
Q ss_pred ChhhHHHHHHHhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEeccc--C-CceEEEEecCCCHHHHHHHHHHHhH
Q 009923 306 DFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVE--M-GQACTIVLRGASHHVLDEAERSLHD 382 (522)
Q Consensus 306 ~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~--~-~~~~TIll~G~t~~~l~e~~~~i~d 382 (522)
++.+|+|||++|||+++++++++++.++|+|+.|++..+|+++|++|++|+ + +++|||+|||+|+.+++|.||+++|
T Consensus 317 ~k~~le~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~D 396 (528)
T 3p9d_D 317 EREEIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHD 396 (528)
T ss_dssp CTHHHHHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998 6 8899999999999999999999999
Q ss_pred HHHHHHHHhhCCccccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcC
Q 009923 383 ALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKE 462 (522)
Q Consensus 383 al~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~ 462 (522)
|++++|++++++++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.++
T Consensus 397 Al~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~ 476 (528)
T 3p9d_D 397 ALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENG 476 (528)
T ss_dssp THHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSS
T ss_pred HHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999888899999999999999999999999999999999999999999878
Q ss_pred CCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcC
Q 009923 463 GCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCA 514 (522)
Q Consensus 463 ~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~ 514 (522)
+.++|||+.+|++.||++.|||||+.||+++|+.|+|+|+||||||++|.++
T Consensus 477 ~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 477 ELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp SCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred CCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 8899999999999999999999999999999999999999999999999764
No 20
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=8.2e-111 Score=900.68 Aligned_cols=515 Identities=26% Similarity=0.423 Sum_probs=487.4
Q ss_pred CcccccccchhhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHH
Q 009923 1 MGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDI 77 (522)
Q Consensus 1 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~ 77 (522)
|+++ +|+++++..+|.+++.+|+.||++|+++|||||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++
T Consensus 1 ~~~~-~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~ 79 (546)
T 3p9d_F 1 MSLQ-LLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARA 79 (546)
T ss_dssp CCCC-SSCTTEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHH
T ss_pred Cccc-ccCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHH
Confidence 7888 88999999999999999999999999999999999999999 66 99999999999999999999999999999
Q ss_pred HhhcccccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHh
Q 009923 78 SKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTL 157 (522)
Q Consensus 78 ~~~~~~~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l 157 (522)
|++||+++||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++.+. ..++.|.++++|++
T Consensus 80 a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~-~~~~~L~~vA~tsl 158 (546)
T 3p9d_F 80 AAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLS-NDREFLLQVARSSL 158 (546)
T ss_dssp HHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSS-TTCHHHHHHHHHHT
T ss_pred HHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccc-cCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999886310 01378999999999
Q ss_pred hccccchhhhHHHHHHHHHHHhhc----CCCCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccccCcceEEeec
Q 009923 158 SSKILSQDKEHFGQLAVDAVMRLK----GSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAKILVANT 232 (522)
Q Consensus 158 ~sk~~~~~~~~la~lv~~a~~~~~----~~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i~~~rIll~~~ 232 (522)
+||+.+.+.++|+++++||+..+. .++++++|+|++++||+..||++++|++|++++.+ .||+.++||+|++++|
T Consensus 159 ~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~ 238 (546)
T 3p9d_F 159 LTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNV 238 (546)
T ss_dssp CSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECC
T ss_pred CCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEecccccccCcceecCceEEEecC
Confidence 999999999999999999998874 35788999999999999999999999999999854 6899999999999999
Q ss_pred ccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcC----------CcEEEeCCCCCchHHHHHHHcCCeEE
Q 009923 233 AMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHG----------INCFVNRQLIYNFPEELFADAGILAI 302 (522)
Q Consensus 233 ~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~----------v~lVl~~~~i~~~~~~~l~~~~I~~i 302 (522)
+|++++++.. +++.+++++++..+.+.|++++++.+++|+..+ ++||+++++|++.+++||.++||+++
T Consensus 239 ~Le~~k~e~~-~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~v 317 (546)
T 3p9d_F 239 SLEYEKTEVN-SGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILAL 317 (546)
T ss_dssp CSSSCCCSSC-BCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEE
T ss_pred cccccccccC-ceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeE
Confidence 9999998875 679999999999999999999999999998754 35999999999999999999999999
Q ss_pred ecCChhhHHHHHHHhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhH
Q 009923 303 EHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHD 382 (522)
Q Consensus 303 ~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~d 382 (522)
+++++++|+|||++|||+++++++++++.++|+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|
T Consensus 318 r~v~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~D 397 (546)
T 3p9d_F 318 RRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRD 397 (546)
T ss_dssp CCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCccccCCCchHHHHHHHHHH---HHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHH
Q 009923 383 ALCVLSQTVNDSRVLFGGGWPEMVMAKEVDE---LARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEH 459 (522)
Q Consensus 383 al~~~~~~~~~~~vvpGGG~~E~~la~~L~~---~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h 459 (522)
|++++|++++++++|||||++|++++.+|++ ++...++++|+++++|++||+.||++|++|||+|+.+++.+|+..|
T Consensus 398 Al~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 477 (546)
T 3p9d_F 398 GLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDEL 477 (546)
T ss_dssp HHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred HHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 5888999999999999999999999999999999999999999998
Q ss_pred hc-----CCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCC
Q 009923 460 QK-----EGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRR 518 (522)
Q Consensus 460 ~~-----~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~~~ 518 (522)
.+ ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.+.+...
T Consensus 478 ~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~ 541 (546)
T 3p9d_F 478 DDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTL 541 (546)
T ss_dssp HHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSC
T ss_pred hhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 73 456899999999999999999999999999999999999999999999999887654
No 21
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2.1e-109 Score=890.75 Aligned_cols=510 Identities=34% Similarity=0.542 Sum_probs=480.5
Q ss_pred cccch--hhhhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChHHHHHHHHHhh
Q 009923 6 IFRDE--ANEEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPAAKVLVDISKV 80 (522)
Q Consensus 6 ~~~~~--~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~ 80 (522)
+|+++ .++.+|.++|.+|+.||..|+++|||||||+||+|| ++ |+++|||||+||||+|+++||+|+|++++|++
T Consensus 31 ~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~ 110 (562)
T 3p9d_E 31 IVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKS 110 (562)
T ss_dssp CCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHHHHHH
T ss_pred EeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHHHHHH
Confidence 34555 366789999999999999999999999999999999 66 99999999999999999999999999999999
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCch-hhhHHHHHHHHHHHhhc
Q 009923 81 QDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENA-ETFKSDLMKIAMTTLSS 159 (522)
Q Consensus 81 ~~~~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~-~~~~~~l~~i~~t~l~s 159 (522)
||+++||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++.+. +.+++.|.++++|+++|
T Consensus 111 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~s 190 (562)
T 3p9d_E 111 QDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGS 190 (562)
T ss_dssp HHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSS
T ss_pred HHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999987542 22246899999999999
Q ss_pred cccchhhhHHHHHHHHHHHhhcC----CCCCcCeEEEEecCCCCcCcceeeeEEEeccCCC-CCCccc------cCcceE
Q 009923 160 KILSQDKEHFGQLAVDAVMRLKG----STNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRI------ENAKIL 228 (522)
Q Consensus 160 k~~~~~~~~la~lv~~a~~~~~~----~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~-~~~~~i------~~~rIl 228 (522)
|+.+.+.++|+++++||+..+.+ ++++++|+|++++||+++||++++|++|++++.+ .||+.+ ++++|+
T Consensus 191 K~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIa 270 (562)
T 3p9d_E 191 KIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLA 270 (562)
T ss_dssp STTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSCCC-----TTCSSCEEC
T ss_pred chhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCcCcccccccccccceEE
Confidence 99999999999999999998854 5778899999999999999999999999999854 588888 899999
Q ss_pred EeecccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChh
Q 009923 229 VANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFD 308 (522)
Q Consensus 229 l~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~ 308 (522)
+++|||++.+.+.. +++.+++++++..+.+.|+++++.++++|.+.|++||+++++|++.+++||.++||+++++++++
T Consensus 271 ll~~~le~~k~~~~-~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v~~v~k~ 349 (562)
T 3p9d_E 271 ILTCPFEPPKPKTK-HKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVGGQ 349 (562)
T ss_dssp EEESCCSSCCCSSC-CCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCEECCCTT
T ss_pred EecccccccccccC-ceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEEeccCHH
Confidence 99999999887763 66889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhCCeeccccCCCCCCCccccceEEEEEEcC--eEEEEEecccCCceEEEEecCCCHHHHHHHHHHHhHHHHH
Q 009923 309 GIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGE--DKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCV 386 (522)
Q Consensus 309 ~L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~--~~~~~~~~~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~ 386 (522)
+|+|||++|||+++++++++++.++|+|+.|++..+|+ ++|++|+||++++.|||+|||+|+.+++|.||+++||+++
T Consensus 350 ~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~DAL~~ 429 (562)
T 3p9d_E 350 ELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCV 429 (562)
T ss_dssp THHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999985 8999999999999999999999999999999999999999
Q ss_pred HHHHhhCCccccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhc-CCCc
Q 009923 387 LSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQK-EGCP 465 (522)
Q Consensus 387 ~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~-~~~~ 465 (522)
+|++++++++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+ ++.+
T Consensus 430 ~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~ 509 (562)
T 3p9d_E 430 VRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISN 509 (562)
T ss_dssp HHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSS
T ss_pred HHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999975 4578
Q ss_pred eeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCC
Q 009923 466 AGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPR 516 (522)
Q Consensus 466 ~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~ 516 (522)
+|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.+.+.
T Consensus 510 ~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 510 IGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp BCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred eeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999999999999999999999999999999998764
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.9e-102 Score=825.19 Aligned_cols=468 Identities=35% Similarity=0.556 Sum_probs=380.5
Q ss_pred CCeEEecChHHHhhhccccChHHHHHHHHHhhcccccCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 009923 49 REVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECAR 128 (522)
Q Consensus 49 g~~~iTnDg~tIlk~l~~~hP~a~ll~~~~~~~~~~~GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~ 128 (522)
|+++|||||+||||+|+++||+|+|++++|++||+++||||||+++|+++||+++.+++.+|+||+.|++||++|++.++
T Consensus 7 G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~ 86 (500)
T 3aq1_B 7 GDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCR 86 (500)
T ss_dssp ------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred CCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccCCchhhhHHHHHHHHHHHhhccccchhhhHHHHHHHHHHHhhcCC------CC-CcCeEEEEecCCCCcC
Q 009923 129 DALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS------TN-LESIQIIKKPGGSLKD 201 (522)
Q Consensus 129 ~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~la~lv~~a~~~~~~~------~~-~~~I~i~~i~Gg~~~d 201 (522)
+.|+++++|++..+ ++.|.++++|+++||+.++++++|++++++|+..++++ +| .++|+|++++|+++++
T Consensus 87 ~~L~~~s~~v~~~d---~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~d 163 (500)
T 3aq1_B 87 EILETITIAISPDD---EAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDD 163 (500)
T ss_dssp HHHHHHCEECCTTC---HHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGG
T ss_pred HHHHHhcCCCCCCc---HHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCccc
Confidence 99999999986422 47899999999999999999999999999999998654 34 5689999999999999
Q ss_pred cceeeeEEEeccCCC-CCCccccCcceEEeecccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEE
Q 009923 202 SFLDEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCF 280 (522)
Q Consensus 202 S~l~~Givl~~~~~~-~~~~~i~~~rIll~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lV 280 (522)
|++++|++|++++.+ .||+.++||||++++++|++++++.. +++.+++++++..+.+.|+++++.++++|.+.+++||
T Consensus 164 s~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lv 242 (500)
T 3aq1_B 164 SELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVD-SEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVV 242 (500)
T ss_dssp CEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC--------------------------CHHHHHHHHHHTTCCSEE
T ss_pred eEEEeeeEEeecCCCCCCcccccCCEEEEEeCCccccccccc-eeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEE
Confidence 999999999999864 68999999999999999999998874 7899999999999999999999999999999999999
Q ss_pred EeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEecccCCce
Q 009923 281 VNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQA 360 (522)
Q Consensus 281 l~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~ 360 (522)
+++++|++.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|+||+++++
T Consensus 243 i~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~ 322 (500)
T 3aq1_B 243 FCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQNSKA 322 (500)
T ss_dssp EESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEEEEEETTCCC
T ss_pred EECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEEEECCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHhHHHH
Q 009923 361 CTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALVAIPTTI 440 (522)
Q Consensus 361 ~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L 440 (522)
|||+|||+|+.+++|.||+++||++++|++++++++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|
T Consensus 323 ~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~L 402 (500)
T 3aq1_B 323 VTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVAL 402 (500)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHH
T ss_pred EEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCCCC
Q 009923 441 ADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILRVDEIITCAPRRRED 520 (522)
Q Consensus 441 ~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~iD~iI~~~~~~~~~ 520 (522)
++|||+|+.+++.+|++.|.+++.++|||+.+|++.||.+.|||||+.+|+++|+.|+|+|++|||||++|...|+++|+
T Consensus 403 a~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~ 482 (500)
T 3aq1_B 403 AENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSANQG 482 (500)
T ss_dssp HHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred HHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 99999999999999999998777899999999999999999999999999999999999999999999999998876543
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.4e-93 Score=763.31 Aligned_cols=458 Identities=25% Similarity=0.365 Sum_probs=420.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccCh----HHHHHHHHHhhccccc
Q 009923 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEV 85 (522)
Q Consensus 13 ~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP----~a~ll~~~~~~~~~~~ 85 (522)
...|.++|.+|++||..|+++|+|||||+||+|| .+ |+++|||||+||||+|+++|| +|+|++++|++||+++
T Consensus 5 ~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~ 84 (543)
T 1we3_A 5 LVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVA 84 (543)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhheec
Confidence 4678999999999999999999999999999999 66 999999999999999999999 9999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhccccchh
Q 009923 86 GDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQD 165 (522)
Q Consensus 86 GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~ 165 (522)
||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++. ++.|.++++++.+
T Consensus 85 GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-----~~~l~~vA~iS~~------- 152 (543)
T 1we3_A 85 GDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVED-----RKAIEEVATISAN------- 152 (543)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCS-----HHHHHHHHHHHHT-------
T ss_pred CCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC-----HHHHHHhhhhhcC-------
Confidence 9999999999999999999999999999999999999999999999999999863 3789999987652
Q ss_pred hhHHHHHHHHHHHhhcCCCCCcCeEEEEecCCCCcCc-ceeeeEEEeccCCC--------CCCccccCcceEEeeccccc
Q 009923 166 KEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIGI--------GQPKRIENAKILVANTAMDT 236 (522)
Q Consensus 166 ~~~la~lv~~a~~~~~~~~~~~~I~i~~i~Gg~~~dS-~l~~Givl~~~~~~--------~~~~~i~~~rIll~~~~L~~ 236 (522)
+++|++++++|+..++.+. .|.|. +|+++++| ++++|++|++++.+ .|++.++||+|++++++
T Consensus 153 ~~~i~~li~dAv~~V~~~g---~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~--- 224 (543)
T 1we3_A 153 DPEVGKLIADAMEKVGKEG---IITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK--- 224 (543)
T ss_dssp CHHHHHHHHHHHHTTCTTS---EEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSC---
T ss_pred CHHHHHHHHHHHHHhCcCC---cEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCC---
Confidence 6889999999999997553 36664 89999999 99999999999753 26677999999999974
Q ss_pred ccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHc------CCeEEe-----cC
Q 009923 237 DKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIE-----HA 305 (522)
Q Consensus 237 ~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~------~I~~i~-----~v 305 (522)
+++++++. .+++++.+.++++|+++++|++.+++||..+ +|++++ ++
T Consensus 225 -----------Is~~~~l~-----------~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~ 282 (543)
T 1we3_A 225 -----------VSNVRELL-----------PILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDR 282 (543)
T ss_dssp -----------BCCHHHHH-----------HHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHH
T ss_pred -----------cCCHHHHH-----------HHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhh
Confidence 34455542 4677889999999999999999999999984 667777 78
Q ss_pred ChhhHHHHHHHhCCeeccc-----cCCCCCCCccccceEEEEEEcCeEEEEEecccCC----------------------
Q 009923 306 DFDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG---------------------- 358 (522)
Q Consensus 306 ~~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~---------------------- 358 (522)
++++|+|||++|||+++++ ++++++.++|+|+.|+ ++.+++++|+||.++
T Consensus 283 ~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~ 359 (543)
T 1we3_A 283 RKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVR---ITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYA 359 (543)
T ss_dssp HHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEE---ECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHH
T ss_pred hHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEE---EEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhH
Confidence 8899999999999999996 8999999999999998 468999999998753
Q ss_pred -------------ceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHHhcCCChhHHH
Q 009923 359 -------------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHA 425 (522)
Q Consensus 359 -------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~ 425 (522)
++|||+|||+|+.+++|.||+++||++++|++++++ +|||||++|++++.+|++++.+.++++|++
T Consensus 360 ~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~~q~~ 438 (543)
T 1we3_A 360 REKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGDEATG 438 (543)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCchHHHH
Confidence 789999999999999999999999999999999876 999999999999999999998889999999
Q ss_pred HHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHH
Q 009923 426 IEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMIL 505 (522)
Q Consensus 426 ~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL 505 (522)
+++|++||+.||++|++|||+|+.+++.+|+..| ++.++|||+.+|++.||++.|||||+.+|+++|+.|+|+|++||
T Consensus 439 i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h--~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL 516 (543)
T 1we3_A 439 AKIVRRALEEPARQIAENAGYEGSVIVQQILAET--KNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALIL 516 (543)
T ss_dssp HHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCC--SCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhc--CCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999877 45789999999999999999999999999999999999999999
Q ss_pred hhhHHHhcCCCCC
Q 009923 506 RVDEIITCAPRRR 518 (522)
Q Consensus 506 ~iD~iI~~~~~~~ 518 (522)
++|++|...|++.
T Consensus 517 ~id~iI~~~~~~~ 529 (543)
T 1we3_A 517 TTEAVVAEKPEKK 529 (543)
T ss_dssp TEEEEEEECSCC-
T ss_pred HHHHHhhcCCccC
Confidence 9999999988753
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1e-92 Score=755.42 Aligned_cols=456 Identities=22% Similarity=0.336 Sum_probs=417.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccCh----HHHHHHHHHhhccccc
Q 009923 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEV 85 (522)
Q Consensus 13 ~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP----~a~ll~~~~~~~~~~~ 85 (522)
...|.++|.+|++||..|+++|++||||+||+|| .+ |+++|||||+||+|+|+++|| +|+|++++|++|++++
T Consensus 5 ~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~ 84 (547)
T 1kp8_A 5 VKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAA 84 (547)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhcccc
Confidence 4578999999999999999999999999999999 66 999999999999999999999 9999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhccccchh
Q 009923 86 GDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQD 165 (522)
Q Consensus 86 GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~ 165 (522)
||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++. ++.|.+++++++ ++
T Consensus 85 GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-----~e~l~~vA~iS~------~~ 153 (547)
T 1kp8_A 85 GDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSD-----SKAIAQVGTISA------NS 153 (547)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCS-----HHHHHHHHHHHT------TS
T ss_pred CCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCC-----HHHHHHHHHHhc------cc
Confidence 9999999999999999999999999999999999999999999999999999863 378999998775 35
Q ss_pred hhHHHHHHHHHHHhhcCCCCCcCeEEEEecCCCCcCc-ceeeeEEEeccCCC--------CCCccccCcceEEeeccccc
Q 009923 166 KEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIGI--------GQPKRIENAKILVANTAMDT 236 (522)
Q Consensus 166 ~~~la~lv~~a~~~~~~~~~~~~I~i~~i~Gg~~~dS-~l~~Givl~~~~~~--------~~~~~i~~~rIll~~~~L~~ 236 (522)
+++|++++++|+..++++. .|+|. +|+++++| ++++|++|++++.+ .||+.++||+|+++++++
T Consensus 154 ~~~i~~liadAv~~V~~dg---~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~I-- 226 (547)
T 1kp8_A 154 DETVGKLIAEAMDKVGKEG---VITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKI-- 226 (547)
T ss_dssp CHHHHHHHHHHHHHHCTTS---EEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEE--
T ss_pred hhHHHHHHHHHHHHhCcCC---cEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcC--
Confidence 7899999999999997653 36664 89999999 99999999999753 266779999999999753
Q ss_pred ccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHc------CCeEEe-----cC
Q 009923 237 DKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIE-----HA 305 (522)
Q Consensus 237 ~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~------~I~~i~-----~v 305 (522)
++++++. .+++++.+.++++|+++++|++.+++||..+ +|++++ ++
T Consensus 227 ------------s~~~~l~-----------~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~ 283 (547)
T 1kp8_A 227 ------------SNIREML-----------PVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDR 283 (547)
T ss_dssp ------------CCGGGTH-----------HHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHH
T ss_pred ------------CCHHHHH-----------HHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccc
Confidence 4444432 4677889999999999999999999999985 457777 88
Q ss_pred ChhhHHHHHHHhCCeeccc-----cCCCCCCCccccceEEEEEEcCeEEEEEecccCC----------------------
Q 009923 306 DFDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG---------------------- 358 (522)
Q Consensus 306 ~~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~---------------------- 358 (522)
++++|+|||++|||+++++ ++++++.++|+|+.|+ ++.+++++|+||.++
T Consensus 284 rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~ 360 (547)
T 1kp8_A 284 RKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVV---INKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYD 360 (547)
T ss_dssp HHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHH
T ss_pred cHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEE---EccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhh
Confidence 8899999999999999996 8999999999999998 468999999998754
Q ss_pred -------------ceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHHhcCCChhHHH
Q 009923 359 -------------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHA 425 (522)
Q Consensus 359 -------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~ 425 (522)
++|||+|||+|+.+++|.||+++||++++|++++++ +|||||++|++++.+|++++. .++++|++
T Consensus 361 ~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~ 438 (547)
T 1kp8_A 361 REKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QNADQNVG 438 (547)
T ss_dssp HHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCchHHHH
Confidence 789999999999999999999999999999999886 999999999999999998876 78899999
Q ss_pred HHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHH
Q 009923 426 IEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMIL 505 (522)
Q Consensus 426 ~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL 505 (522)
+++|++||+.||++|++|||+|+.+++.+|+.. +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||
T Consensus 439 i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~----~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL 514 (547)
T 1kp8_A 439 IKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG----DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMI 514 (547)
T ss_dssp HHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS----CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc----CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999853 4689999999999999999999999999999999999999999
Q ss_pred hhhHHHhcCCCCC
Q 009923 506 RVDEIITCAPRRR 518 (522)
Q Consensus 506 ~iD~iI~~~~~~~ 518 (522)
++|++|...|++.
T Consensus 515 ~id~iI~~~~~~~ 527 (547)
T 1kp8_A 515 TTECMVTDLPKND 527 (547)
T ss_dssp TEEEEEEECCC--
T ss_pred hHhheeecCCccC
Confidence 9999999988654
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.1e-93 Score=763.60 Aligned_cols=457 Identities=23% Similarity=0.345 Sum_probs=389.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccCh----HHHHHHHHHhhccccc
Q 009923 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNP----AAKVLVDISKVQDDEV 85 (522)
Q Consensus 13 ~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP----~a~ll~~~~~~~~~~~ 85 (522)
...|.++|.+|++||..|+++|+|||||+||+|| .+ |+++|||||+||||+|+++|| +|+|++++|++||+++
T Consensus 6 ~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~ 85 (545)
T 1iok_A 6 VKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEA 85 (545)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGGC
T ss_pred hhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhcccc
Confidence 4678999999999999999999999999999999 66 999999999999999999999 9999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhccccchh
Q 009923 86 GDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQD 165 (522)
Q Consensus 86 GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~ 165 (522)
||||||+++|+++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++.. +.|.+++++++ ++
T Consensus 86 GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~-----e~l~~va~iS~------~~ 154 (545)
T 1iok_A 86 GDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDS-----SEVAQVGTISA------NG 154 (545)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCST-----TTTTHHHHHTT------TT
T ss_pred CCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCH-----HHHHHHHHhhc------CC
Confidence 99999999999999999999999999999999999999999999999999998643 56888997775 35
Q ss_pred hhHHHHHHHHHHHhhcCCCCCcCeEEEEecCCCCcCc-ceeeeEEEeccCCC--------CCCccccCcceEEeeccccc
Q 009923 166 KEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDS-FLDEGFILDKKIGI--------GQPKRIENAKILVANTAMDT 236 (522)
Q Consensus 166 ~~~la~lv~~a~~~~~~~~~~~~I~i~~i~Gg~~~dS-~l~~Givl~~~~~~--------~~~~~i~~~rIll~~~~L~~ 236 (522)
+++|++++++|+..++++. .|+|. +|+++++| ++++|++|++++.+ .||+.++||+|++++++++.
T Consensus 155 ~~~i~~li~dAv~~V~~~g---~I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~ 229 (545)
T 1iok_A 155 ESFIGQQIAEAMQRVGNEG---VITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSS 229 (545)
T ss_dssp CHHHHHHHHHHHHHHCTTS---CCCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCC
T ss_pred chhHHHHHHHHHHHhccCC---eEEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCC
Confidence 7899999999999997654 35554 89999999 99999999999753 26677999999999987542
Q ss_pred ccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHc------CCeEEe-----cC
Q 009923 237 DKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADA------GILAIE-----HA 305 (522)
Q Consensus 237 ~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~------~I~~i~-----~v 305 (522)
++++ ..+++++.+.++++|+++++|++.+++||..+ +|++++ ++
T Consensus 230 --------------~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~ 284 (545)
T 1iok_A 230 --------------LQPM-----------VPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDR 284 (545)
T ss_dssp --------------CCC----------------------CCCCEEEESCBC-----------------CEEEECSCCTTH
T ss_pred --------------HHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhc
Confidence 2222 24577788999999999999999999999985 557776 88
Q ss_pred ChhhHHHHHHHhCCeeccc-----cCCCCCCCccccceEEEEEEcCeEEEEEecccCC----------------------
Q 009923 306 DFDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG---------------------- 358 (522)
Q Consensus 306 ~~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~---------------------- 358 (522)
++++|+|||++|||+++++ +++++++++|+|+.|+ ++.++|++|+||.++
T Consensus 285 ~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~ 361 (545)
T 1iok_A 285 RKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVS---INKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYD 361 (545)
T ss_dssp HHHHHHHHHHHHTC---------------CTTSEEEEEEE---ECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSH
T ss_pred cHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEE---EecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhh
Confidence 8999999999999999996 9999999999999998 467999999998753
Q ss_pred -------------ceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHHhcCCChhHHH
Q 009923 359 -------------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHA 425 (522)
Q Consensus 359 -------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~ 425 (522)
++|||+|||+|+.+++|.||+++||++++|++++++ +|||||++|++++.+|++++. .++++|++
T Consensus 362 ~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~ 439 (545)
T 1iok_A 362 REKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANSDQDAG 439 (545)
T ss_dssp HHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSHHHHHH
T ss_pred HHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCchHHHH
Confidence 789999999999999999999999999999999886 999999999999999998876 78899999
Q ss_pred HHHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHH
Q 009923 426 IEAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMIL 505 (522)
Q Consensus 426 ~~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL 505 (522)
+++|++||+.||++|++|||+|+.+++++|+..| ++++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||
T Consensus 440 i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~---~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL 516 (545)
T 1iok_A 440 IAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS---DKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLI 516 (545)
T ss_dssp HHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC---STTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc---CCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998765 4689999999999999999999999999999999999999999
Q ss_pred hhhHHHhcCCCCC
Q 009923 506 RVDEIITCAPRRR 518 (522)
Q Consensus 506 ~iD~iI~~~~~~~ 518 (522)
++|++|...|++.
T Consensus 517 ~id~iI~~~~~~~ 529 (545)
T 1iok_A 517 TTEAMIAEKPEPK 529 (545)
T ss_dssp TEEEEEEECC---
T ss_pred hHHHhhccCCccC
Confidence 9999999988653
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=8.3e-92 Score=746.31 Aligned_cols=457 Identities=25% Similarity=0.349 Sum_probs=345.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhcCCCCCCCcc-cC--CCeEEecChHHHhhhccccChH----HHHHHHHHhhccccc
Q 009923 13 EEKGERARMASFVGAMAIADLVKTTLGPKGMSTG-RG--REVTVTNDGATILKSLHIDNPA----AKVLVDISKVQDDEV 85 (522)
Q Consensus 13 ~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~-~~--g~~~iTnDg~tIlk~l~~~hP~----a~ll~~~~~~~~~~~ 85 (522)
...|+++|.+|+.|+..|+++|++||||+||+|| .+ |+++|||||+||||+|+++||+ |+|++++|++|++++
T Consensus 5 ~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e~ 84 (546)
T 3rtk_A 5 IAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVA 84 (546)
T ss_dssp --------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC---
T ss_pred eeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhhh
Confidence 4678999999999999999999999999999999 65 9999999999999999999998 999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhcccccCCchhhhHHHHHHHHHHHhhccccchh
Q 009923 86 GDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQD 165 (522)
Q Consensus 86 GDGtts~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~ 165 (522)
||||||+++|+++||+++.+++.+|+||+.|++||++|.+.+++.|+++++|++. ++.|.++++++.+
T Consensus 85 GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~-----~e~L~~vA~iS~~------- 152 (546)
T 3rtk_A 85 GDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVET-----KEQIAATAAISAG------- 152 (546)
T ss_dssp ----CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCS-----HHHHHHHHHHHHT-------
T ss_pred CCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC-----hHHHHhHeEEeCC-------
Confidence 9999999999999999999999999999999999999999999999999999873 3789999987753
Q ss_pred hhHHHHHHHHHHHhhcCCCCCcCeEEEEecCCCCcCcceeeeEEEeccCCC--------CCCccccCcceEEeecccccc
Q 009923 166 KEHFGQLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGI--------GQPKRIENAKILVANTAMDTD 237 (522)
Q Consensus 166 ~~~la~lv~~a~~~~~~~~~~~~I~i~~i~Gg~~~dS~l~~Givl~~~~~~--------~~~~~i~~~rIll~~~~L~~~ 237 (522)
++++++++++|+..++.++ .|.|.+.. +...+|++++|++|++++.+ .||+.++||+|+++++.
T Consensus 153 ~~~i~~liadAv~~V~~dg---vI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~k---- 224 (546)
T 3rtk_A 153 DQSIGDLIAEAMDKVGNEG---VITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSK---- 224 (546)
T ss_dssp CHHHHHHHHHHHHHSCTTS---EEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSE----
T ss_pred chHHHHHHHHHHHHhccCC---ceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCc----
Confidence 6789999999999997654 36666433 45578999999999999753 47889999999999974
Q ss_pred cccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcC------CeEEec-----CC
Q 009923 238 KVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAG------ILAIEH-----AD 306 (522)
Q Consensus 238 ~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~------I~~i~~-----v~ 306 (522)
+++++++. .++++|.+.|++|++++++|++.+++||..++ +++++. .+
T Consensus 225 ----------Is~~~~l~-----------~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~r 283 (546)
T 3rtk_A 225 ----------VSTVKDLL-----------PLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRR 283 (546)
T ss_dssp ----------ECCSTTTH-----------HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHH
T ss_pred ----------cCCHHHHH-----------HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccc
Confidence 34455442 35788999999999999999999999998754 466553 34
Q ss_pred hhhHHHHHHHhCCeecc-----ccCCCCCCCccccceEEEEEEcCeEEEEEecccCC-----------------------
Q 009923 307 FDGIERLALVTGGEIAS-----TFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG----------------------- 358 (522)
Q Consensus 307 ~~~L~~ia~~tGa~ii~-----~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------- 358 (522)
+++|+|||++|||++++ +++++++.++|+|+.|+ ++.+++++|+||.++
T Consensus 284 k~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ 360 (546)
T 3rtk_A 284 KAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDR 360 (546)
T ss_dssp HHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHH
T ss_pred hhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhH
Confidence 77899999999999999 58999999999999998 799999999998763
Q ss_pred ------------ceEEEEecCCCHHHHHHHHHHHhHHHHHHHHHhhCCccccCCCchHHHHHHHHHHHHhcCCChhHHHH
Q 009923 359 ------------QACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVMAKEVDELARKTPGKKSHAI 426 (522)
Q Consensus 359 ------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~ 426 (522)
++|||+|||+|+.+++|.||+++||++++|++++++ +|||||++|++++.+|++++ .++++|+++
T Consensus 361 ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g~eq~~i 437 (546)
T 3rtk_A 361 EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEGDEATGA 437 (546)
T ss_dssp HHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCTTHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--cccHHHHHH
Confidence 389999999999999999999999999999999876 99999999999999999887 789999999
Q ss_pred HHHHHHHHHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEEcCCCcccccccCCcccchHHHHHHHHHHHHHHHHHHh
Q 009923 427 EAFSRALVAIPTTIADNAGLDSAELIAQLRAEHQKEGCPAGIDVISGSVGDMAELGISESFKVKQAVLLSATEAAEMILR 506 (522)
Q Consensus 427 ~~~a~aL~~ip~~L~~NaG~~~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gi~dp~~vk~~~l~~A~e~~~~iL~ 506 (522)
++|++||+.||++|++|||+|+.+++++|+.. ...+|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+
T Consensus 438 ~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~----~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~ 513 (546)
T 3rtk_A 438 NIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL----PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLT 513 (546)
T ss_dssp HHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS----CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh----cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999874 23489999999999999999999999999999999999999999
Q ss_pred hhHHHhcCCCCCCC
Q 009923 507 VDEIITCAPRRRED 520 (522)
Q Consensus 507 iD~iI~~~~~~~~~ 520 (522)
+|++|...|+++|+
T Consensus 514 id~iI~~~~~~~~~ 527 (546)
T 3rtk_A 514 TEAVVADKPEKEKA 527 (546)
T ss_dssp CC------------
T ss_pred HHHHHhcCCCCCCC
Confidence 99999998876543
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=1.1e-36 Score=279.26 Aligned_cols=172 Identities=22% Similarity=0.353 Sum_probs=149.0
Q ss_pred CcCcceeeeEEEeccCCCC-CCccccCcceEEeecccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 009923 199 LKDSFLDEGFILDKKIGIG-QPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGI 277 (522)
Q Consensus 199 ~~dS~l~~Givl~~~~~~~-~~~~i~~~rIll~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v 277 (522)
++||++++|++|++++.+. ||+.++||||++++|+|++++++.. +++.+++++++..+.+.|++++++++++|++.|+
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~-~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 79 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQ-TDIEITREEDFTRILQMEEEYIHQLCEDIIQLKP 79 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC---------------CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCc-cEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4699999999999998764 9999999999999999999998874 7899999999999999999999999999999999
Q ss_pred cEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCccc-cceEEEEEEcCeEEEEEeccc
Q 009923 278 NCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGH-CKLIEEIMIGEDKLIHFSGVE 356 (522)
Q Consensus 278 ~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~ 356 (522)
|||+++++|+|.+++||.++||++++|+++++|+|||++|||++++++++++++++|+ |+.|++..+|+++|++|+||+
T Consensus 80 nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~ 159 (178)
T 1gml_A 80 DVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCK 159 (178)
T ss_dssp SEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEES
T ss_pred cEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCceEEEEecCCCHH
Q 009923 357 MGQACTIVLRGASHH 371 (522)
Q Consensus 357 ~~~~~TIll~G~t~~ 371 (522)
++++|||+|||++..
T Consensus 160 ~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 160 DPKACTILLRGASHH 174 (178)
T ss_dssp STTSCEEEEEC----
T ss_pred CCCEEEEEEECCCcc
Confidence 999999999999864
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.97 E-value=2.7e-31 Score=238.52 Aligned_cols=153 Identities=27% Similarity=0.433 Sum_probs=145.2
Q ss_pred eeeEEEeccCCC-CCCccccCcceEEeecccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeC
Q 009923 205 DEGFILDKKIGI-GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNR 283 (522)
Q Consensus 205 ~~Givl~~~~~~-~~~~~i~~~rIll~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~lVl~~ 283 (522)
++|++|++++.+ +||+.++||||++++|+|++++++.. +++.+++++++..+.+.|++++++++++|++.|+|||+++
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~-~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~ 79 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIE-AKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQ 79 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHH-HHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEES
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccc-eeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEEC
Confidence 579999999876 59999999999999999999988874 6788999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeeccccCCCCCCCccccceEEEEEEcCeEEEEEecccCC
Q 009923 284 QLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMG 358 (522)
Q Consensus 284 ~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~ 358 (522)
++|+|.+++||.++||++++|+++++|+|||++|||++++++++++++++|+|+.|++..+|+++|++|+||++.
T Consensus 80 k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 80 KGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp SCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC--
T ss_pred CccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999874
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=98.34 E-value=4.6e-06 Score=74.85 Aligned_cols=143 Identities=17% Similarity=0.227 Sum_probs=96.0
Q ss_pred ceeeeEEEeccCCC--------CCCccccCcceEEeecccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 009923 203 FLDEGFILDKKIGI--------GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIA 274 (522)
Q Consensus 203 ~l~~Givl~~~~~~--------~~~~~i~~~rIll~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~ 274 (522)
++++|+-|+++|.. .|...++||.|++++. .|++.+++.++.+ ...+
T Consensus 3 evvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdk--------------KIs~i~~ilP~LE-----------~~~~ 57 (194)
T 3m6c_A 3 EFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQD--------------KISSLPDLLPLLE-----------KVAG 57 (194)
T ss_dssp CCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSS--------------EECCHHHHHHHHH-----------HHHH
T ss_pred EEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcC--------------ccCCHHHHHHHHH-----------HHHH
Confidence 57899999999731 2445678899998862 3788888877543 2222
Q ss_pred cCCcEEEeCCCCCchHHHHHHH------cCCeEEecCC-----hhhHHHHHHHhCCeeccc-----cCCCCCCCccccce
Q 009923 275 HGINCFVNRQLIYNFPEELFAD------AGILAIEHAD-----FDGIERLALVTGGEIAST-----FDNPESVKLGHCKL 338 (522)
Q Consensus 275 ~~v~lVl~~~~i~~~~~~~l~~------~~I~~i~~v~-----~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~ 338 (522)
.+-.+++....|+..++..|.- .++.+++... +..|++||.+||+++++. +++.+..++|+|++
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~ 137 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARR 137 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccE
Confidence 3334665555777766654422 3567787665 456999999999999984 57778889999998
Q ss_pred EEEEEEcCeEEEEEecccCCceEEEEecC-CCHHHHHHHHHHHhHHHHH
Q 009923 339 IEEIMIGEDKLIHFSGVEMGQACTIVLRG-ASHHVLDEAERSLHDALCV 386 (522)
Q Consensus 339 v~~~~ig~~~~~~~~~~~~~~~~TIll~G-~t~~~l~e~~~~i~dal~~ 386 (522)
+.. . +--|.++.| +++..++++...++.-+..
T Consensus 138 v~v---t-------------kd~T~iv~G~g~~~~I~~Rv~qIr~~ie~ 170 (194)
T 3m6c_A 138 VVV---S-------------KDDTVIVDGGGTAEAVANRAKHLRAEIDK 170 (194)
T ss_dssp EEE---C-------------SSCEEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred EEE---c-------------CCceEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 872 1 223555544 5666666666666655543
No 30
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=98.26 E-value=1.5e-05 Score=71.77 Aligned_cols=140 Identities=11% Similarity=0.191 Sum_probs=94.8
Q ss_pred eeEEEeccCCC--------CCCccccCcceEEeecccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 009923 206 EGFILDKKIGI--------GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGI 277 (522)
Q Consensus 206 ~Givl~~~~~~--------~~~~~i~~~rIll~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v 277 (522)
+|+.|+++|.. .|...++||.|++.+. .|++.+++.++. +.+.+.+-
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdk--------------KIs~i~~ilP~L-----------E~v~~~~r 67 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDK--------------KISNIRELLPVL-----------EGVAKASK 67 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEE--------------EECCHHHHHHHH-----------HHHHTSSC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcC--------------ccCCHHHHHHHH-----------HHHHHhCC
Confidence 58999988631 2445688999999872 478888887743 33334444
Q ss_pred cEEEeCCCCCchHHHHHHH------cCCeEEecCC-----hhhHHHHHHHhCCeeccc-----cCCCCCCCccccceEEE
Q 009923 278 NCFVNRQLIYNFPEELFAD------AGILAIEHAD-----FDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIEE 341 (522)
Q Consensus 278 ~lVl~~~~i~~~~~~~l~~------~~I~~i~~v~-----~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~ 341 (522)
.+++....|+..++..|.- .++.+|+... +..|++||.+||+++++. +++.+..++|+|++|..
T Consensus 68 pLlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~v 147 (201)
T 3osx_A 68 PLVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVI 147 (201)
T ss_dssp CEEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEE
T ss_pred CeEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEE
Confidence 5666666777766654432 3567788766 356999999999999984 56777888999998872
Q ss_pred EEEcCeEEEEEecccCCceEEEEecC-CCHHHHHHHHHHHhHHHHH
Q 009923 342 IMIGEDKLIHFSGVEMGQACTIVLRG-ASHHVLDEAERSLHDALCV 386 (522)
Q Consensus 342 ~~ig~~~~~~~~~~~~~~~~TIll~G-~t~~~l~e~~~~i~dal~~ 386 (522)
. +--|.++.| .+...++++...++.-+..
T Consensus 148 ---t-------------kd~TtIv~G~G~~~~I~~Rv~qIr~qie~ 177 (201)
T 3osx_A 148 ---N-------------KDTTTIIDGVGEEGAIAARVTQIRQQIEE 177 (201)
T ss_dssp ---C-------------SSCEEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred ---c-------------CCceEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 1 223555644 5666667666666655543
No 31
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=98.08 E-value=1.5e-05 Score=68.12 Aligned_cols=109 Identities=18% Similarity=0.266 Sum_probs=76.6
Q ss_pred eEEEeccCCC--------CCCccccCcceEEeecccccccccccCeEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 009923 207 GFILDKKIGI--------GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGIN 278 (522)
Q Consensus 207 Givl~~~~~~--------~~~~~i~~~rIll~~~~L~~~~~~~~~~~~~i~~~~~l~~l~~~e~~~l~~~~~~I~~~~v~ 278 (522)
|+.|+++|.. .|...++||.|++.+. .|++.+++.++. +++.+.+-.
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdk--------------KIs~i~~llP~L-----------E~v~~~~~p 55 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEK--------------KVSNVRELLPIL-----------EQVAQTGKP 55 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESS--------------EECCHHHHHHHH-----------HHHHTTTCC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecc--------------cccCHHHHHHHH-----------HHHHHHCCC
Confidence 6778887621 2445677999998862 378888887743 333344445
Q ss_pred EEEeCCCCCchHHHHHHH------cCCeEEecCC-----hhhHHHHHHHhCCeeccc-----cCCCCCCCccccceEE
Q 009923 279 CFVNRQLIYNFPEELFAD------AGILAIEHAD-----FDGIERLALVTGGEIAST-----FDNPESVKLGHCKLIE 340 (522)
Q Consensus 279 lVl~~~~i~~~~~~~l~~------~~I~~i~~v~-----~~~L~~ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~ 340 (522)
+++....|+..++..|.- .++.+++... +..|++||.+||+++++. +++.+..++|+|+++.
T Consensus 56 LlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~ 133 (145)
T 1srv_A 56 LLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVR 133 (145)
T ss_dssp EEEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEE
T ss_pred EEEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEE
Confidence 666666787766665533 3567777664 467999999999999974 5666777899999887
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=52.61 E-value=31 Score=28.86 Aligned_cols=52 Identities=17% Similarity=0.072 Sum_probs=39.5
Q ss_pred HHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCC
Q 009923 267 EKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 319 (522)
Q Consensus 267 ~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa 319 (522)
..++.|.+.+|++|++. +|.+-+...|.++||.++......--+.|.....+
T Consensus 67 ~~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G 118 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSG 118 (136)
T ss_dssp CHHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhC
Confidence 35677778899999999 68999999999999999986654433444444443
No 33
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=48.67 E-value=38 Score=27.40 Aligned_cols=52 Identities=19% Similarity=0.131 Sum_probs=39.4
Q ss_pred HHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCC
Q 009923 267 EKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 319 (522)
Q Consensus 267 ~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa 319 (522)
..++.|.+.++++|++. ++.+-+...|.++||.++.....+--+.|.....+
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g 105 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGG 105 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcC
Confidence 46677778999999999 68999999999999999986554433444444444
No 34
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=47.57 E-value=52 Score=26.66 Aligned_cols=52 Identities=21% Similarity=0.203 Sum_probs=39.0
Q ss_pred HHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCe
Q 009923 268 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 320 (522)
Q Consensus 268 ~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 320 (522)
.++.|...+|++|++. +|.+-+...|.++||.++......--+.|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 5566778999999999 589999999999999999865544334444444443
No 35
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=43.95 E-value=66 Score=25.62 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=38.8
Q ss_pred HHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCe
Q 009923 268 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGE 320 (522)
Q Consensus 268 ~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ 320 (522)
..+.|...++++|++. ++.+-+...|.++||.++......--+.|.....+.
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 4566777899999999 589999999999999999865544344444444443
No 36
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=42.85 E-value=48 Score=26.70 Aligned_cols=50 Identities=10% Similarity=0.026 Sum_probs=37.7
Q ss_pred HHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCCh-hhHHHHHHHhC
Q 009923 268 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADF-DGIERLALVTG 318 (522)
Q Consensus 268 ~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~-~~L~~ia~~tG 318 (522)
..+.|...++++|++. ++.+-+...|.++||.++..... .--+.|.....
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~ 109 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLD 109 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHT
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHc
Confidence 5666777999999999 58999999999999999986554 33333444333
No 37
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=32.85 E-value=73 Score=26.45 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=36.6
Q ss_pred HHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCC
Q 009923 268 KVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGG 319 (522)
Q Consensus 268 ~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa 319 (522)
.++.|...+|++|++. ++.+-+...|.+ ||.++......--+.|.....+
T Consensus 71 ~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G 120 (136)
T 2re2_A 71 MLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEG 120 (136)
T ss_dssp HHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhC
Confidence 5666777899999999 589999999999 9999987553323334433433
No 38
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=28.81 E-value=1.1e+02 Score=20.98 Aligned_cols=34 Identities=21% Similarity=0.197 Sum_probs=24.2
Q ss_pred HHHHHHHHcCCChHHHHHHHHHH---HHHHHHHHhhc
Q 009923 101 REAEKLVAAKIHPMTIISGFRMA---AECARDALLQK 134 (522)
Q Consensus 101 ~~~~~li~~gi~p~~I~~g~~~a---~~~~~~~l~~~ 134 (522)
.+..+|...|+++..++++++.+ .+.+..+|.++
T Consensus 13 ~~Ia~Lm~mGFsr~~ai~AL~~a~nnve~AaniLlef 49 (52)
T 2ooa_A 13 AKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILREF 49 (52)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHHh
Confidence 35678899999999999988876 33444444444
No 39
>2ln3_A De novo designed protein OR135; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.29 E-value=1.8e+02 Score=20.52 Aligned_cols=47 Identities=28% Similarity=0.263 Sum_probs=33.8
Q ss_pred HHHHHHHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhCCeecc
Q 009923 265 MREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIAS 323 (522)
Q Consensus 265 l~~~~~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tGa~ii~ 323 (522)
+..+..+.+..|.++-+--.+.+|--.+-|. .+|+++|+-||..|..
T Consensus 15 lleialkfisqgldlevefdstddkeieefe------------rdmedlakktgvqiqk 61 (83)
T 2ln3_A 15 LLEIALKFISQGLDLEVEFDSTDDKEIEEFE------------RDMEDLAKKTGVQIQK 61 (83)
T ss_dssp HHHHHHHHHHHTCEEEEEECCCCHHHHHHHH------------HHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHhcCCceEEEecCCChHHHHHHH------------hHHHHHHHhhchhHHH
Confidence 3445666777788888777777775555553 5799999999987654
No 40
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=21.01 E-value=1.8e+02 Score=22.47 Aligned_cols=47 Identities=15% Similarity=0.157 Sum_probs=34.6
Q ss_pred HHHHHcCCcEEEeCCCCCchHHHHHHHcCCeEEecCChhhHHHHHHHhC
Q 009923 270 QKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTG 318 (522)
Q Consensus 270 ~~I~~~~v~lVl~~~~i~~~~~~~l~~~~I~~i~~v~~~~L~~ia~~tG 318 (522)
+.|...++++|++. ++.+-+...|.++ |.++.....+--+.|.....
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~ 96 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIE 96 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHT
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHc
Confidence 45566899999997 6899999999999 99998655443344444433
Done!