Query 009924
Match_columns 522
No_of_seqs 198 out of 822
Neff 5.2
Searched_HMMs 46136
Date Thu Mar 28 18:57:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009924.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009924hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00149 potassium transporter 100.0 1E-171 3E-176 1410.7 46.6 520 1-522 259-779 (779)
2 PLN00148 potassium transporter 100.0 5E-171 1E-175 1404.8 45.7 518 1-522 258-785 (785)
3 PLN00151 potassium transporter 100.0 9E-169 2E-173 1386.3 45.8 509 1-522 335-852 (852)
4 PLN00150 potassium ion transpo 100.0 2E-168 4E-173 1383.5 45.6 503 1-522 275-779 (779)
5 TIGR00794 kup potassium uptake 100.0 3E-149 7E-154 1225.7 41.0 458 2-522 230-688 (688)
6 PRK10745 trkD potassium transp 100.0 4E-133 1E-137 1084.2 38.3 416 2-522 204-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 3E-125 6E-130 1015.8 24.2 342 2-348 193-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 4E-120 8E-125 962.6 36.0 418 2-521 209-626 (627)
9 PF14362 DUF4407: Domain of un 59.1 33 0.00073 35.3 7.6 83 166-248 16-111 (301)
10 COG4059 MtrE Tetrahydromethano 57.1 10 0.00022 38.3 3.2 39 211-249 243-287 (304)
11 PF06570 DUF1129: Protein of u 56.5 28 0.00062 34.0 6.2 21 223-243 179-199 (206)
12 KOG3643 GABA receptor [Signal 55.7 8 0.00017 42.5 2.4 89 118-210 225-323 (459)
13 TIGR00911 2A0308 L-type amino 41.5 36 0.00079 37.3 4.8 18 108-125 339-356 (501)
14 TIGR03813 put_Glu_GABA_T putat 34.3 45 0.00098 36.3 4.1 19 224-242 434-452 (474)
15 PF05545 FixQ: Cbb3-type cytoc 32.5 40 0.00087 25.6 2.4 29 232-260 19-47 (49)
16 cd05900 Ig_Aggrecan Immunoglob 25.5 62 0.0013 28.8 2.7 25 325-349 76-100 (112)
17 PF06155 DUF971: Protein of un 24.8 41 0.0009 28.5 1.4 14 492-505 26-39 (89)
18 TIGR00930 2a30 K-Cl cotranspor 24.2 1.4E+03 0.03 28.0 15.5 60 104-166 404-463 (953)
19 PF05297 Herpes_LMP1: Herpesvi 23.9 26 0.00056 36.8 0.0 60 187-249 126-190 (381)
20 PF13520 AA_permease_2: Amino 21.8 74 0.0016 33.6 2.9 160 14-179 192-365 (426)
21 PRK10655 potE putrescine trans 21.6 2.7E+02 0.0059 29.8 7.2 15 111-125 297-311 (438)
22 PF13937 DUF4212: Domain of un 21.3 4.1E+02 0.009 22.7 6.8 35 211-246 30-69 (81)
23 TIGR00907 2A0304 amino acid pe 21.0 1.3E+02 0.0028 32.7 4.7 26 224-249 454-479 (482)
No 1
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=1.4e-171 Score=1410.67 Aligned_cols=520 Identities=88% Similarity=1.405 Sum_probs=461.0
Q ss_pred CchhchhcCccceeeecceeeeecchhhhhhccCCCCccceeeehhhhhhhHHHHhcccchhhhccCcCcccccccceee
Q 009924 1 MYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYV 80 (522)
Q Consensus 1 i~~ff~~~~~~g~~~LG~V~L~iTG~EAlyADlGHFg~~~I~~aw~~~V~P~Lll~Y~GQaA~l~~~~~~p~~~~npFy~ 80 (522)
+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||+..++++||||+
T Consensus 259 ~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~~~~~pFy~ 338 (779)
T PLN00149 259 MYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYV 338 (779)
T ss_pred HHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhcCcchhccccCcHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999995333477789999
Q ss_pred eccccchhhHHHHHHHHHHHhhhheeechhhHHHHHHHcCCCCceeEEecCCCcCCceechhhHHHHHHHhheeeEeeCC
Q 009924 81 SVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRD 160 (522)
Q Consensus 81 ~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmv~~~~vv~~F~~ 160 (522)
++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++|||
T Consensus 339 ~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~ 418 (779)
T PLN00149 339 SVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRD 418 (779)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheeEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcccceeEeehhHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhhhcccCCccHHHHHHHHHHHHHHH
Q 009924 161 TKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCV 240 (522)
Q Consensus 161 s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGw~pl~ia~~~~~iM~~ 240 (522)
|++||||||+||++||++||+|+++||+.+|+||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++
T Consensus 419 s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~ 498 (779)
T PLN00149 419 TKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSFIFLLVMYV 498 (779)
T ss_pred hHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhhccccCHHHHHhcCCCCCcccccceEEEEeCCCCCchhHHHHHhhhCCcccceEEEEEEeEecccccC
Q 009924 241 WHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVR 320 (522)
Q Consensus 241 W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~~f~t~~~~~vP~~~~h~~~~~~~~h~~~vfv~i~~~~~P~V~ 320 (522)
||||++++|+++.++++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|+|++||++||+|||++|+|+||
T Consensus 499 W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~lhe~~Vfv~ik~~~vP~V~ 578 (779)
T PLN00149 499 WHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVR 578 (779)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccC
Confidence 99999999999999999999999999888889999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEecCCCccEEEEEEEEeeeeccCCchHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCcceeeccCCCCC
Q 009924 321 PEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTE 400 (522)
Q Consensus 321 ~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (522)
++|||++++++++++++|||++||||||.+++++|||++|+++|++|||+|+.+.+..+++.++.|+++++.++.+.+.+
T Consensus 579 ~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (779)
T PLN00149 579 PEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVVGTCSTHLE 658 (779)
T ss_pred hhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999998999999999999999999874321111100122455555543332111
Q ss_pred CccccCcc-cccccCCCCCcccccccCCccccCccceeeccCCCCccchhHHHHHHHHHHHHHcCcEEEeeeeEEEecCC
Q 009924 401 GIQMSEDD-VIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQG 479 (522)
Q Consensus 401 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~vkar~~ 479 (522)
.....++. .+..+. +..+.+...+++...++++++++.+++...+++++||+++|++|||+||+||+||++|||||+
T Consensus 659 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~Ar~~ 736 (779)
T PLN00149 659 GIQLREDDSDKQEPA--GTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREELQELMEAREAGMAYILGHSYVRAKQG 736 (779)
T ss_pred ccccccccccccccc--cccccccccCccccCcccceeeccccccccchhHHHHHHHHHHHHHcCcEEEecCceEEEcCC
Confidence 11000000 000000 000111101111012346778877665566789999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHhhccCCCCcccccCCCCeeeeeeEEEC
Q 009924 480 SSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 522 (522)
Q Consensus 480 Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v 522 (522)
|||+||++|||+|+|||||||+|.++|+|||+|||||||+|||
T Consensus 737 Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 737 SSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred CcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999997
No 2
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=5e-171 Score=1404.82 Aligned_cols=518 Identities=58% Similarity=1.021 Sum_probs=461.3
Q ss_pred CchhchhcCccceeeecceeeeecchhhhhhccCCCCccceeeehhhhhhhHHHHhcccchhhhccCcCcccccccceee
Q 009924 1 MYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYV 80 (522)
Q Consensus 1 i~~ff~~~~~~g~~~LG~V~L~iTG~EAlyADlGHFg~~~I~~aw~~~V~P~Lll~Y~GQaA~l~~~~~~p~~~~npFy~ 80 (522)
+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++| |++++||||+
T Consensus 258 ~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~---p~~~~npFf~ 334 (785)
T PLN00148 258 IIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKN---IPSIPNSFYD 334 (785)
T ss_pred HHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcC---cccccCcHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999 6999999999
Q ss_pred eccccchhhHHHHHHHHHHHhhhheeechhhHHHHHHHcCCCCceeEEecCCCcCCceechhhHHHHHHHhheeeEeeCC
Q 009924 81 SVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRD 160 (522)
Q Consensus 81 ~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmv~~~~vv~~F~~ 160 (522)
++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++|||
T Consensus 335 ~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~ 414 (785)
T PLN00148 335 SIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRD 414 (785)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcccceeEeehhHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhhhcccCCccHHHHHHHHHHHHHHH
Q 009924 161 TKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCV 240 (522)
Q Consensus 161 s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGw~pl~ia~~~~~iM~~ 240 (522)
|++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++
T Consensus 415 s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~ 494 (785)
T PLN00148 415 TTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYI 494 (785)
T ss_pred chhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhhccccCHHHHHhcCCCCCcccccceEEEEeCCCCCchhHHHHHhhhCCcccceEEEEEEeEecccccC
Q 009924 241 WHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVR 320 (522)
Q Consensus 241 W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~~f~t~~~~~vP~~~~h~~~~~~~~h~~~vfv~i~~~~~P~V~ 320 (522)
||||++++++++.+|+++++++.++.++.++.||||+|+|||++.+|+|++|.||++|+|++||++||+|||++|+|+||
T Consensus 495 W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~ 574 (785)
T PLN00148 495 WHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVS 574 (785)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccC
Confidence 99999999999999999999999999888889999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEecCCCccEEEEEEEEeeeeccCCchHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCcceeeccCCCCC
Q 009924 321 PEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTE 400 (522)
Q Consensus 321 ~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (522)
++|||+++++++++|++|||++||||||.+++++|||++|+++|++|||+|+.+.++++.+.++.|+++++.++++....
T Consensus 575 ~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (785)
T PLN00148 575 PEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSS 654 (785)
T ss_pred hhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999989999999999999999999875421110000112344554433321110
Q ss_pred CccccCcc------ccccc-C---CCCCcccccccCCccccCccceeeccCCCCccchhHHHHHHHHHHHHHcCcEEEee
Q 009924 401 GIQMSEDD------VIVNI-D---SPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILG 470 (522)
Q Consensus 401 ~~~~~~~~------~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG 470 (522)
.....+.+ ....+ + .+..++..+.++++ ..++++++++.+++.+.+++++||+++|++|||+||+||+|
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG 733 (785)
T PLN00148 655 SLLMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPG-QSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMG 733 (785)
T ss_pred cccccccccccccccccccccccccccccccccccccc-cccccceeecccccccccchHHHHHHHHHHHHHcCcEEEec
Confidence 00000000 00000 0 00111111222232 24567788877655556789999999999999999999999
Q ss_pred eeEEEecCCCChhHHHHHHHHHHHHhhccCCCCcccccCCCCeeeeeeEEEC
Q 009924 471 HSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 522 (522)
Q Consensus 471 ~~~vkar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v 522 (522)
|++||||++|||+||++||++|+|||||||+|.++|+|||+|||||||+|||
T Consensus 734 ~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 734 HSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred cceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 9999999999999999999999999999999999999999999999999997
No 3
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=8.8e-169 Score=1386.29 Aligned_cols=509 Identities=45% Similarity=0.789 Sum_probs=446.4
Q ss_pred CchhchhcCccceeeecceeeeecchhhhhhccCCCCccceeeehhhhhhhHHHHhcccchhhhccCcCcccccccceee
Q 009924 1 MYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYV 80 (522)
Q Consensus 1 i~~ff~~~~~~g~~~LG~V~L~iTG~EAlyADlGHFg~~~I~~aw~~~V~P~Lll~Y~GQaA~l~~~~~~p~~~~npFy~ 80 (522)
+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++| |++++||||+
T Consensus 335 ~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~---p~~~~npFy~ 411 (852)
T PLN00151 335 IYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKN---PDSAEQIFFS 411 (852)
T ss_pred HHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcC---cccccCcHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999 6999999999
Q ss_pred eccccchhhHHHHHHHHHHHhhhheeechhhHHHHHHHcCCCCceeEEecCCCcCCceechhhHHHHHHHhheeeEeeCC
Q 009924 81 SVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRD 160 (522)
Q Consensus 81 ~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmv~~~~vv~~F~~ 160 (522)
++|+|++||+|++||+||||||||||||+|||++||++||||||+||+|||++++||||||+|||+||++|++||++|||
T Consensus 412 svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~ 491 (852)
T PLN00151 412 SVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRS 491 (852)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcccceeEeehhHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhhhcccCCccHHHHHHHHHHHHHHH
Q 009924 161 TKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCV 240 (522)
Q Consensus 161 s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGw~pl~ia~~~~~iM~~ 240 (522)
|++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++
T Consensus 492 s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~ 571 (852)
T PLN00151 492 ITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYI 571 (852)
T ss_pred HHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhhccccCHHHHHhcCCCCCcccccceEEEEeCCCCCchhHHHHHhhhCCcccceEEEEEEeEecccccC
Q 009924 241 WHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVR 320 (522)
Q Consensus 241 W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~~f~t~~~~~vP~~~~h~~~~~~~~h~~~vfv~i~~~~~P~V~ 320 (522)
||||++++|+++.+|++|++++.++.++.+++||||+|+|||++++|+|++|.||++|+|++||++||||||++|+|+||
T Consensus 572 W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~ 651 (852)
T PLN00151 572 WNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVP 651 (852)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccC
Confidence 99999999999999999999999999988889999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEecCCCccEEEEEEEEeeeeccC-CchHHHHHHHHHHHHHHhcCCCCCCCCC-CCCCCCCC---Ccceeecc
Q 009924 321 PEERFLVGHIGPRQYRIYRCIVRYGYRDVHK-DDMEFEKDLVCSIAEFIRSGSVGINGAN-EDPYKDDD---KMTVVGTC 395 (522)
Q Consensus 321 ~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~-~~~~f~~~l~~~L~~FI~~e~~~~~~~~-~~~~~~~~---~~~~~~~~ 395 (522)
++|||++++++++++++|||++||||||.++ +++|||++|+++|++|||+|+.+..... +..++.++ +++.....
T Consensus 652 ~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (852)
T PLN00151 652 QEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIA 731 (852)
T ss_pred hhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccC
Confidence 9999999999999999999999999999976 8899999999999999999874311000 00000010 11221111
Q ss_pred CCCCCCccccCcccccccCCC----CCcccccccCCccccCccceeeccCCCCccchhHHHHHHHHHHHHHcCcEEEeee
Q 009924 396 SSHTEGIQMSEDDVIVNIDSP----GTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGH 471 (522)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~ 471 (522)
+................+++. +..+. +.+.+. .+++++ .+.+++++||+++|++|+|+||+||+||
T Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~-----~~~~~~~~~El~~l~~a~e~Gv~yilG~ 801 (852)
T PLN00151 732 PNGSVYSLGVPLLADYRLTSKPIPEASTSE-EVSPVL----PSSSMS-----SDEDQSLEYELSFIREAKESGVVYLLGH 801 (852)
T ss_pred CCcccccccccccccccccccccccccccc-cccccc----cccccc-----cccCccHHHHHHHHHHHHHcCcEEEecc
Confidence 100000000000000000000 00000 000000 012222 2235789999999999999999999999
Q ss_pred eEEEecCCCChhHHHHHHHHHHHHhhccCCCCcccccCCCCeeeeeeEEEC
Q 009924 472 SYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 522 (522)
Q Consensus 472 ~~vkar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v 522 (522)
++||||++|+|+||++||++|+|||||||+|.++|+|||++||||||+|||
T Consensus 802 ~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 802 GDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred ceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999999999999997
No 4
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=1.9e-168 Score=1383.51 Aligned_cols=503 Identities=49% Similarity=0.891 Sum_probs=446.4
Q ss_pred CchhchhcCccceeeecceeeeecchhhhhhccCCCCccceeeehhhhhhhHHHHhcccchhhhccCcCcccccccceee
Q 009924 1 MYKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYV 80 (522)
Q Consensus 1 i~~ff~~~~~~g~~~LG~V~L~iTG~EAlyADlGHFg~~~I~~aw~~~V~P~Lll~Y~GQaA~l~~~~~~p~~~~npFy~ 80 (522)
+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++| |++++||||+
T Consensus 275 ~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~GQaA~ll~~---p~~~~npFf~ 351 (779)
T PLN00150 275 IVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKH---MEDVNDPFYR 351 (779)
T ss_pred HHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcchHHHHhcC---cccccCcHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999 7999999999
Q ss_pred eccccchhhHHHHHHHHHHHhhhheeechhhHHHHHHHcCCCCceeEEecCCCcCCceechhhHHHHHHHhheeeEeeCC
Q 009924 81 SVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRD 160 (522)
Q Consensus 81 ~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmv~~~~vv~~F~~ 160 (522)
++|+|++||++++||+||||||||||||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++|||
T Consensus 352 ~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~ 431 (779)
T PLN00150 352 SLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLVITAGFRD 431 (779)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcccceeEeehhHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhhhcccCCccHHHHHHHHHHHHHHH
Q 009924 161 TKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCV 240 (522)
Q Consensus 161 s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGw~pl~ia~~~~~iM~~ 240 (522)
|++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++
T Consensus 432 s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~ 511 (779)
T PLN00150 432 TDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYT 511 (779)
T ss_pred hHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhhccccCHHHHHhcCCCCCcccccceEEEEeCCCCCchhHHHHHhhhCCcccceEEEEEEeEecccccC
Q 009924 241 WHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVR 320 (522)
Q Consensus 241 W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~~f~t~~~~~vP~~~~h~~~~~~~~h~~~vfv~i~~~~~P~V~ 320 (522)
||||++++++++.+|++|++++.++.++.++.||||+|+|||++++|+|++|.||++|+|++||++||+|||++|+|+||
T Consensus 512 W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~ 591 (779)
T PLN00150 512 WHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVP 591 (779)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccC
Confidence 99999999999999999999999998888888999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEecCCCccEEEEEEEEeeeeccCCchHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCcceeeccCCCCC
Q 009924 321 PEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTE 400 (522)
Q Consensus 321 ~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (522)
++|||+++++++++|++|||++||||||.+++++|||++|+++|++|||+|+.+..+++ ++++...+.++...
T Consensus 592 ~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~e~~~~~~~~-------~~~~~~~~~~~~~~ 664 (779)
T PLN00150 592 QDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQSDL-------ESMAASWTPEELMG 664 (779)
T ss_pred hhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHhhhhcccccc-------cccccccccccccc
Confidence 99999999999999999999999999999988999999999999999999874311110 01111111110000
Q ss_pred CccccCc--ccccccCCCCCcccccccCCccccCccceeeccCCCCccchhHHHHHHHHHHHHHcCcEEEeeeeEEEecC
Q 009924 401 GIQMSED--DVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQ 478 (522)
Q Consensus 401 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~vkar~ 478 (522)
..+.... ....+......++.++.+.+ .+++.++ ++.+++++||+++|++|||+||+||+||++||||+
T Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~Ak~ 735 (779)
T PLN00150 665 EGNSVGSGLFTQYDQSDINFATSQEWKRP----SSQEDSV-----SGHSSDTQDEVAFLNKCKEAGVVYILGNNDVKARK 735 (779)
T ss_pred cCCcccccccccccccccccccccccccc----ccccccc-----ccccccHHHHHHHHHHHHHcCcEEEeccceEEEcC
Confidence 0000000 00000000000000111111 0112222 22357899999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHhhccCCCCcccccCCCCeeeeeeEEEC
Q 009924 479 GSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 522 (522)
Q Consensus 479 ~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v 522 (522)
+|||+||++||++|+|||||||+|.++|+|||+|||||||+|||
T Consensus 736 ~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 736 DSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred CCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=3.1e-149 Score=1225.71 Aligned_cols=458 Identities=44% Similarity=0.825 Sum_probs=430.8
Q ss_pred chhchhcCccceeeecceeeeecchhhhhhccCCCCccceeeehhhhhhhHHHHhcccchhhhccCcCcccccccceeee
Q 009924 2 YKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVS 81 (522)
Q Consensus 2 ~~ff~~~~~~g~~~LG~V~L~iTG~EAlyADlGHFg~~~I~~aw~~~V~P~Lll~Y~GQaA~l~~~~~~p~~~~npFy~~ 81 (522)
++||.+||+.||.+||||+||+||+||||||||||||+|||+||+++|||||+|||+||||||++| |++.+||||++
T Consensus 230 ~~f~~~~~~~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~---p~~~~NpFf~~ 306 (688)
T TIGR00794 230 VQFFIEYGTVGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKH---PEAIKNPFFLS 306 (688)
T ss_pred HHHHHHCCCceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcC---cchhcCcHHHh
Confidence 689999999999999999999999999999999999999999999999999999999999999999 69999999999
Q ss_pred ccccchhhHHHHHHHHHHHhhhheeechhhHHHHHHHcCCCCceeEEecCCCcCCceechhhHHHHHHHhheeeEeeCCc
Q 009924 82 VPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDT 161 (522)
Q Consensus 82 ~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmv~~~~vv~~F~~s 161 (522)
+|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||
T Consensus 307 ~P~~~~~p~~vlAtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S 386 (688)
T TIGR00794 307 IPDWALWPLFIIATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDT 386 (688)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcccceeEeehhHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhhhcccCCccHHHHHHHHHHHHHHHh
Q 009924 162 KRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVW 241 (522)
Q Consensus 162 ~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGw~pl~ia~~~~~iM~~W 241 (522)
++||+|||+||++||+|||+|+++||+.+||||++++++|+++|+.+|+.||+||+.||+||||+||++|++++++|++|
T Consensus 387 ~~la~AYGiaVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W 466 (688)
T TIGR00794 387 NNLGAAYGIAVTGTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTW 466 (688)
T ss_pred HHHHHHhhhhhhhhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhccccCHHHHHh-cCCCCCcccccceEEEEeCCCCCchhHHHHHhhhCCcccceEEEEEEeEecccccC
Q 009924 242 HYGTLKKYEFDLQNKVSINWLLS-LGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVR 320 (522)
Q Consensus 242 ~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~rvpG~~~f~t~~~~~vP~~~~h~~~~~~~~h~~~vfv~i~~~~~P~V~ 320 (522)
+||++++++++.++++|++++.+ +.++.+++|+||+|+|||++++++|+++.||++|+|++||++||+||+++|+|+||
T Consensus 467 ~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp 546 (688)
T TIGR00794 467 RYGRFRKLRRDHEHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVH 546 (688)
T ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCC
Confidence 99999999999999999999977 55555568999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEecCCCccEEEEEEEEeeeeccCCchHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCcceeeccCCCCC
Q 009924 321 PEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTE 400 (522)
Q Consensus 321 ~~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (522)
++|||+++++++++ |+|||++||||||+++.+++|+++++++|.+||+++.... .. + .++
T Consensus 547 ~~eR~~v~~l~~~~-g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~~--~~---~-~~~------------- 606 (688)
T TIGR00794 547 NEERVQISQVGPTE-GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGFN--LN---N-LEE------------- 606 (688)
T ss_pred cceEEEEEEEcCCC-CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhhc--cc---c-ccc-------------
Confidence 99999999999755 8999999999999999889999999999999998764210 00 0 000
Q ss_pred CccccCcccccccCCCCCcccccccCCccccCccceeeccCCCCccchhHHHHHHHHHHHHHcCcEEEeeeeEEEecCCC
Q 009924 401 GIQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGS 480 (522)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~vkar~~S 480 (522)
. .+ .++ +...+||++.+++++|+||+|++||++++++++|
T Consensus 607 ----------~----------~~------------~~~--------~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~ 646 (688)
T TIGR00794 607 ----------L----------SD------------KRC--------RMPIEEIFENAMETKEHGYSYFMGEESLILKKRS 646 (688)
T ss_pred ----------c----------cc------------ccc--------ccchHHHHHHHHHHhhcCCEEEeeceEEEECCCc
Confidence 0 00 000 0125799999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHhhccCCCCcccccCCCCeeeeeeEEEC
Q 009924 481 SALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 522 (522)
Q Consensus 481 s~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v 522 (522)
+++||+.||++|.|||||||++...++|||+|++||||.||+
T Consensus 647 ~~~~~~~I~~lf~~l~rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 647 PILRKIRVNHVFLFIRRNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred cHHHHHHHHHHHHHHHHhccChhhheeCChhhEEEEeeEEEC
Confidence 999999999999999999999999999999999999999996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=4.4e-133 Score=1084.19 Aligned_cols=416 Identities=27% Similarity=0.516 Sum_probs=388.9
Q ss_pred chhchhcCccceeeecceeeeecchhhhhhccCCCCccceeeehhhhhhhHHHHhcccchhhhccCcCcccccccceeee
Q 009924 2 YKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVS 81 (522)
Q Consensus 2 ~~ff~~~~~~g~~~LG~V~L~iTG~EAlyADlGHFg~~~I~~aw~~~V~P~Lll~Y~GQaA~l~~~~~~p~~~~npFy~~ 81 (522)
++||.+||..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++| |++.+||||.+
T Consensus 204 ~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~---p~~~~NpFf~~ 280 (622)
T PRK10745 204 VHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKN---PEAIKNPFFLL 280 (622)
T ss_pred HHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcC---chhhcCcHHHh
Confidence 689999999999999999999999999999999999999999999999999999999999999999 79999999999
Q ss_pred ccccchhhHHHHHHHHHHHhhhheeechhhHHHHHHHcCCCCceeEEecCCCcCCceechhhHHHHHHHhheeeEeeCCc
Q 009924 82 VPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDT 161 (522)
Q Consensus 82 ~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmv~~~~vv~~F~~s 161 (522)
+|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||+|
T Consensus 281 ~P~~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS 360 (622)
T PRK10745 281 APDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHS 360 (622)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcccceeEeehhHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhhhcccCCccHHHHHHHHHHHHHHHh
Q 009924 162 KRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVW 241 (522)
Q Consensus 162 ~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGw~pl~ia~~~~~iM~~W 241 (522)
++||+|||+||++||+|||+|++++++.+|+|+++++++++++|+.+|+.||+||+.|++||||+|+++|++++++|++|
T Consensus 361 ~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW 440 (622)
T PRK10745 361 SNLAAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTW 440 (622)
T ss_pred hHHHHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhccccCHHHHHhcCCCCCcccccceEEEEeCCCCCchhHHHHHhhhCCcccceEEEEEEeEecccccCC
Q 009924 242 HYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRP 321 (522)
Q Consensus 242 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~~f~t~~~~~vP~~~~h~~~~~~~~h~~~vfv~i~~~~~P~V~~ 321 (522)
++|++++++++.+++++++++++..+..++.|+||+|+|+|+..+++|+++.|++|||+++||++||+||+++|+|+||+
T Consensus 441 ~~G~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~ 520 (622)
T PRK10745 441 KSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHN 520 (622)
T ss_pred HHhHHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCc
Confidence 99999999999999999999987766556679999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEEecCCCccEEEEEEEEeeeeccCCchHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCcceeeccCCCCCC
Q 009924 322 EERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEG 401 (522)
Q Consensus 322 ~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (522)
+||++++++++ |+|||++||||||+++.++.+ +.. +.+..
T Consensus 521 ~eR~~v~~l~~---g~~rv~~~yGf~e~~~i~~~L-----~~~----~~~g~---------------------------- 560 (622)
T PRK10745 521 VRRVQIEQLSP---TFWRVVASYGWRETPNVEEVF-----HRC----GLEGL---------------------------- 560 (622)
T ss_pred ccEEEEEEECC---CEEEEEEEecCCCCCCHHHHH-----HHH----HhCCC----------------------------
Confidence 99999999996 699999999999986543333 111 10000
Q ss_pred ccccCcccccccCCCCCcccccccCCccccCccceeeccCCCCccchhHHHHHHHHHHHHHcCcEEEeeeeEEEecCCCC
Q 009924 402 IQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSS 481 (522)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~vkar~~Ss 481 (522)
++++ ..++|.+||+.+...++++
T Consensus 561 -----------------------------------~~~~----------------------~~~s~fl~r~~l~~~~~~~ 583 (622)
T PRK10745 561 -----------------------------------SCRM----------------------METSFFMSHESLILGKRPW 583 (622)
T ss_pred -----------------------------------CCCc----------------------cceEEEEeeEEEEeCCCCC
Confidence 0000 1578999999999888877
Q ss_pred ---hhHHHHHHHHHHHHhhccCCCCcccccCCCCeeeeeeEEEC
Q 009924 482 ---ALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 522 (522)
Q Consensus 482 ---~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v 522 (522)
|-|| +|.||.||+++....+++|++|++|+|+.+|+
T Consensus 584 m~~wr~~-----lF~~m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 584 YLRLRGK-----LFLLLQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred cHHHHHH-----HHHHHHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 5554 69999999999999999999999999999986
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=2.6e-125 Score=1015.77 Aligned_cols=342 Identities=42% Similarity=0.798 Sum_probs=338.2
Q ss_pred chhchhcCccceeeecceeeeecchhhhhhccCCCCccceeeehhhhhhhHHHHhcccchhhhccCcCcccccccceeee
Q 009924 2 YKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVS 81 (522)
Q Consensus 2 ~~ff~~~~~~g~~~LG~V~L~iTG~EAlyADlGHFg~~~I~~aw~~~V~P~Lll~Y~GQaA~l~~~~~~p~~~~npFy~~ 81 (522)
++||.+||+.||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++| |++.+||||++
T Consensus 193 i~f~~~~~~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~---p~~~~npFf~~ 269 (534)
T PF02705_consen 193 IRFFIRNGWIGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSH---PEAVSNPFFLL 269 (534)
T ss_pred HHHHHHcCCchhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcC---cchhhhHHHHH
Confidence 689999999999999999999999999999999999999999999999999999999999999999 79999999999
Q ss_pred ccccchhhHHHHHHHHHHHhhhheeechhhHHHHHHHcCCCCceeEEecCCCcCCceechhhHHHHHHHhheeeEeeCCc
Q 009924 82 VPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDT 161 (522)
Q Consensus 82 ~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmv~~~~vv~~F~~s 161 (522)
+|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++.+||||||+|||+||++|++++++||||
T Consensus 270 ~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S 349 (534)
T PF02705_consen 270 IPEWLLWPMVILATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSS 349 (534)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcccceeEeehhHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhhhcccCCccHHHHHHHHHHHHHHHh
Q 009924 162 KRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVW 241 (522)
Q Consensus 162 ~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGw~pl~ia~~~~~iM~~W 241 (522)
++||+|||+||++||++||+|++++++.+||||.+++++++++|+++|+.||+||+.||+||||+|+++|++++++|++|
T Consensus 350 ~~la~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW 429 (534)
T PF02705_consen 350 SNLAAAYGIAVTGTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTW 429 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhccccCHHHHHhcCCCCCcccccceEEEEeCCCCCchhHHHHHhhhCCcccceEEEEEEeEecccccCC
Q 009924 242 HYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRP 321 (522)
Q Consensus 242 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~~f~t~~~~~vP~~~~h~~~~~~~~h~~~vfv~i~~~~~P~V~~ 321 (522)
++|++++++++++++++++++.++.++.++.|+||+|+|+|+..+++|+++.|+++||+++||+++|++++++|+|+||+
T Consensus 430 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~ 509 (534)
T PF02705_consen 430 RRGRKLLYEFERENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPP 509 (534)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCC
Confidence 99999999999999999999999998888999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEEecCCCccEEEEEEEEeeee
Q 009924 322 EERFLVGHIGPRQYRIYRCIVRYGYRD 348 (522)
Q Consensus 322 ~eR~~v~~~~~~~~~~~r~~~ryGy~d 348 (522)
+|||++++++++ |+|||++||||||
T Consensus 510 ~~R~~v~~l~~~--g~~rv~~ryGf~e 534 (534)
T PF02705_consen 510 EERYEVERLGPD--GFYRVTLRYGFME 534 (534)
T ss_pred ceEEEEEEecCC--CEEEEEEEecCCC
Confidence 999999999973 8999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-120 Score=962.62 Aligned_cols=418 Identities=28% Similarity=0.534 Sum_probs=391.1
Q ss_pred chhchhcCccceeeecceeeeecchhhhhhccCCCCccceeeehhhhhhhHHHHhcccchhhhccCcCcccccccceeee
Q 009924 2 YKFVKKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVS 81 (522)
Q Consensus 2 ~~ff~~~~~~g~~~LG~V~L~iTG~EAlyADlGHFg~~~I~~aw~~~V~P~Lll~Y~GQaA~l~~~~~~p~~~~npFy~~ 81 (522)
++|+.++|..||+.||+||||+||+||||||||||||+|||.||+++|+|||+|||+||||++++| |++..||||.+
T Consensus 209 i~fl~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~---p~a~~npFF~~ 285 (627)
T COG3158 209 VHFLLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSN---PEAIGNPFFLL 285 (627)
T ss_pred HHHHHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccC---cccccCcHHHh
Confidence 579999999999999999999999999999999999999999999999999999999999999999 79999999999
Q ss_pred ccccchhhHHHHHHHHHHHhhhheeechhhHHHHHHHcCCCCceeEEecCCCcCCceechhhHHHHHHHhheeeEeeCCc
Q 009924 82 VPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDT 161 (522)
Q Consensus 82 ~P~~~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmv~~~~vv~~F~~s 161 (522)
+|+|++||+++|||+||||||||+|||+||+++||++||++||+||.|||++..||||||.|||+|++++++++++||+|
T Consensus 286 ~P~~aliP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S 365 (627)
T COG3158 286 APDWALIPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSS 365 (627)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcccceeEeehhHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhhhcccCCccHHHHHHHHHHHHHHHh
Q 009924 162 KRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVW 241 (522)
Q Consensus 162 ~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGw~pl~ia~~~~~iM~~W 241 (522)
++||+|||||||++|+|||+|++.+++..|||+.+++.++.++|+++|.+||+||+.|+.||||+|+++|++++++|+||
T Consensus 366 ~~LAaAYGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW 445 (627)
T COG3158 366 SNLAAAYGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTW 445 (627)
T ss_pred HHHHHhhChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhccccCHHHHHhcCCCCCcccccceEEEEeCCCCCchhHHHHHhhhCCcccceEEEEEEeEecccccCC
Q 009924 242 HYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRP 321 (522)
Q Consensus 242 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~~f~t~~~~~vP~~~~h~~~~~~~~h~~~vfv~i~~~~~P~V~~ 321 (522)
++|+++.+++.++++++++.+++...+..+.|||||++|+|+..+.+|.++.|++|||+++||++||+++++.++|||++
T Consensus 446 ~~g~~~l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~ 525 (627)
T COG3158 446 KRGRQILFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHP 525 (627)
T ss_pred hhhhHHHHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCc
Confidence 99999999999999999999888877778899999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEEecCCCccEEEEEEEEeeeeccCCchHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCcceeeccCCCCCC
Q 009924 322 EERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEG 401 (522)
Q Consensus 322 ~eR~~v~~~~~~~~~~~r~~~ryGy~d~~~~~~~f~~~l~~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (522)
+||++++++++ +++|++++|||||+++.++.+ .-++.+.
T Consensus 526 ~~r~~ve~l~~---~f~rV~l~~Gfme~pnvp~~l---------~~~~~~G----------------------------- 564 (627)
T COG3158 526 TDRVKVEQLSD---DFVRVVLHFGFMETPNVPRAL---------RLCRKKG----------------------------- 564 (627)
T ss_pred cceeeeeeccC---ceEEEEEEeeccCCCCHHHHH---------HHHhhcC-----------------------------
Confidence 99999999998 599999999999997764433 1111110
Q ss_pred ccccCcccccccCCCCCcccccccCCccccCccceeeccCCCCccchhHHHHHHHHHHHHHcCcEEEeeeeEEEecCCCC
Q 009924 402 IQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSS 481 (522)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~e~GVvYIlG~~~vkar~~Ss 481 (522)
.+|++ + ...|.+|++.++++++|+
T Consensus 565 ----------------------------------~~f~i-m---------------------~tsFfl~re~l~~~~~~g 588 (627)
T COG3158 565 ----------------------------------LKFDI-M---------------------ETSFFLSRESLIASKNSG 588 (627)
T ss_pred ----------------------------------ceecc-c---------------------ceEEEEEeeeeecCCCCC
Confidence 01111 1 356899999999999999
Q ss_pred hhHHHHHHHHHHHHhhccCCCCcccccCCCCeeeeeeEEE
Q 009924 482 ALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYH 521 (522)
Q Consensus 482 ~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~ 521 (522)
+.+ +-. -.|.+|.||.-++...++||.+|++|+|---|
T Consensus 589 ~~~-w~~-~lfi~l~r~aa~~~~~F~lp~~rvvElGtqve 626 (627)
T COG3158 589 MPR-WRD-RLFIALARNAASPTDYFKLPPNRVVELGTQVE 626 (627)
T ss_pred chH-HHH-HHHHHHHHhcCCHHHhhCCCCCcEEEeeeeee
Confidence 865 433 57999999999999999999999999996544
No 9
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=59.09 E-value=33 Score=35.28 Aligned_cols=83 Identities=13% Similarity=0.117 Sum_probs=49.4
Q ss_pred hcccceeEeehhHHHHHHHHHHHHHhhcchhHHHHHHHHHHH----HHHHHHHHhhhcccCCcc---------HHHHHHH
Q 009924 166 NASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGT----IEALYFSASLIKFLEGAW---------VPIALAF 232 (522)
Q Consensus 166 ~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~~F~~----ie~~f~sa~l~K~~~GGw---------~pl~ia~ 232 (522)
..||.+|.++.++.++-.++.+..+.+.+.+.++++.++++. +|-..+|+.-.+-..+.. +.+++|.
T Consensus 16 ~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~~~~~~~~~~~~~~~R~~lAvliai 95 (301)
T PF14362_consen 16 AGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIRKSDGSRKRLLQALPRLLLAVLIAI 95 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHH
Confidence 357888888888888888888888888886776666555544 565555543322221112 2334444
Q ss_pred HHHHHHHHhhhhHHHH
Q 009924 233 IFLIVMCVWHYGTLKK 248 (522)
Q Consensus 233 ~~~~iM~~W~~G~~~~ 248 (522)
++...+..+-+..+..
T Consensus 96 vIs~pl~l~iF~~eI~ 111 (301)
T PF14362_consen 96 VISEPLELKIFEKEID 111 (301)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444555555555444
No 10
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=57.09 E-value=10 Score=38.27 Aligned_cols=39 Identities=18% Similarity=0.605 Sum_probs=31.6
Q ss_pred HHHHHhhhccc------CCccHHHHHHHHHHHHHHHhhhhHHHHH
Q 009924 211 LYFSASLIKFL------EGAWVPIALAFIFLIVMCVWHYGTLKKY 249 (522)
Q Consensus 211 ~f~sa~l~K~~------~GGw~pl~ia~~~~~iM~~W~~G~~~~~ 249 (522)
+|||+-..-+. +|||+.+++++++..+..+|++--+.+.
T Consensus 243 VFl~~W~~~~~d~~~~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 243 VFLSSWVTTVFDPAVSIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred hhhhhhhhhhcCcccccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 56676665555 8999999999999999999998655553
No 11
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=56.48 E-value=28 Score=34.04 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=16.7
Q ss_pred CccHHHHHHHHHHHHHHHhhh
Q 009924 223 GAWVPIALAFIFLIVMCVWHY 243 (522)
Q Consensus 223 GGw~pl~ia~~~~~iM~~W~~ 243 (522)
.+|+-+++|++.+.+-+-|+.
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999998888766653
No 12
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=55.66 E-value=8 Score=42.49 Aligned_cols=89 Identities=24% Similarity=0.355 Sum_probs=59.3
Q ss_pred HcCCCCceeEEecCCCcCC----ceechhhHHHHHHHhheeeEeeCCcchhhhcccceeEeehhHHHHHHHHHHH-----
Q 009924 118 ALGCFPRVKIVHTSSKIHG----QIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIV----- 188 (522)
Q Consensus 118 ~Lg~fPr~ki~hTS~~~~G----QIYIP~vNw~Lmv~~~~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~----- 188 (522)
+-|-.||+-+...=++..| |+|+|.+=- ..+-=|-.-=|-++-.+=-.++||++..|||++...=..
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~Li----VilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTLI----VILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhhh----hHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 3688999999888888888 999998621 111111122355556666889999999999998764221
Q ss_pred HHhhcchhHHHHHHHHHHH-HHH
Q 009924 189 LCWQKSVFFAICFVFFFGT-IEA 210 (522)
Q Consensus 189 ~vw~~~~~~~~~~~~~F~~-ie~ 210 (522)
+|.-.-+++..+|+.+|++ +|-
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEY 323 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEY 323 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHH
Confidence 2333455666777777776 443
No 13
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=41.48 E-value=36 Score=37.31 Aligned_cols=18 Identities=11% Similarity=0.176 Sum_probs=11.0
Q ss_pred chhhHHHHHHHcCCCCce
Q 009924 108 GTFSIIKQCSALGCFPRV 125 (522)
Q Consensus 108 g~FSii~Qai~Lg~fPr~ 125 (522)
+.=-++...-+-|.+|+.
T Consensus 339 ~~sR~l~a~ardg~lP~~ 356 (501)
T TIGR00911 339 SSSRLFFVGGREGHLPSL 356 (501)
T ss_pred HHHHHHHHHHhcCCccHH
Confidence 333344555578999973
No 14
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=34.32 E-value=45 Score=36.29 Aligned_cols=19 Identities=16% Similarity=0.305 Sum_probs=13.7
Q ss_pred ccHHHHHHHHHHHHHHHhh
Q 009924 224 AWVPIALAFIFLIVMCVWH 242 (522)
Q Consensus 224 Gw~pl~ia~~~~~iM~~W~ 242 (522)
-|.+++++++++....-|.
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888777666565
No 15
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=32.55 E-value=40 Score=25.63 Aligned_cols=29 Identities=24% Similarity=0.692 Sum_probs=16.4
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhccccCHH
Q 009924 232 FIFLIVMCVWHYGTLKKYEFDLQNKVSIN 260 (522)
Q Consensus 232 ~~~~~iM~~W~~G~~~~~~~~~~~~~~~~ 260 (522)
.+++.....|-|-++++.++|...+++++
T Consensus 19 ~~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 19 FVFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 34444455566655556666666666654
No 16
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=25.53 E-value=62 Score=28.81 Aligned_cols=25 Identities=24% Similarity=0.416 Sum_probs=20.5
Q ss_pred EEEEEecCCCccEEEEEEEEeeeec
Q 009924 325 FLVGHIGPRQYRIYRCIVRYGYRDV 349 (522)
Q Consensus 325 ~~v~~~~~~~~~~~r~~~ryGy~d~ 349 (522)
+.+..+...+.|.|+|.+.+|.-|.
T Consensus 76 L~I~nl~~sDsG~Y~C~V~~g~~~~ 100 (112)
T cd05900 76 LEITELRSNDSGTYRCEVMHGIEDN 100 (112)
T ss_pred EEEeecccccCEEEEEEEecCCCCc
Confidence 5566677777899999999998776
No 17
>PF06155 DUF971: Protein of unknown function (DUF971); InterPro: IPR010376 This domain is found in gamma-butyrobetaine dioxygenase and trimethyllysine dioxygenase proteins.; PDB: 2L6N_A 3LUU_A 2L6P_A 3MS5_A 3O2G_A 3N6W_A.
Probab=24.80 E-value=41 Score=28.45 Aligned_cols=14 Identities=36% Similarity=0.601 Sum_probs=10.6
Q ss_pred HHHHhhccCCCCcc
Q 009924 492 YEFLRRNTRVPSYA 505 (522)
Q Consensus 492 Y~FLRkNcR~~~~~ 505 (522)
|.|||+|||.+.-.
T Consensus 26 ~~~LRd~C~Ca~C~ 39 (89)
T PF06155_consen 26 YEWLRDNCPCAECR 39 (89)
T ss_dssp HHHHHHT-SSSSTC
T ss_pred HHHHhccCCChhhc
Confidence 79999999987644
No 18
>TIGR00930 2a30 K-Cl cotransporter.
Probab=24.18 E-value=1.4e+03 Score=28.03 Aligned_cols=60 Identities=12% Similarity=0.094 Sum_probs=28.8
Q ss_pred heeechhhHHHHHHHcCCCCceeEEecCCCcCCceechhhHHHHHHHhheeeEeeCCcchhhh
Q 009924 104 AIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGN 166 (522)
Q Consensus 104 A~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmv~~~~vv~~F~~s~~l~~ 166 (522)
+.+.|+=-+....-+-|.+|..+..- +.+++==.|..-.++..+..++.+.+.+-+.|+.
T Consensus 404 a~l~~asRvl~AmArDg~lP~l~~fa---kv~~k~~tP~~Alllt~iIa~l~ili~~l~~ia~ 463 (953)
T TIGR00930 404 ASLVSAPRLFQALCKDNIYPFLQFFG---KGYGKNGEPLRAYLLTAFIAEGFILIAELNTIAP 463 (953)
T ss_pred HHHHHHHHHHHHHHhcCCCCcchhhc---ccCCCCCCcHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 33455555555566778999643321 1222222566554444333333334444444444
No 19
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=23.92 E-value=26 Score=36.82 Aligned_cols=60 Identities=22% Similarity=0.425 Sum_probs=0.0
Q ss_pred HHHHhh--cchhHHHHHHHHHHHHHHHHHHHhhhcccCCccHHHHHH---HHHHHHHHHhhhhHHHHH
Q 009924 187 IVLCWQ--KSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALA---FIFLIVMCVWHYGTLKKY 249 (522)
Q Consensus 187 ~~~vw~--~~~~~~~~~~~~F~~ie~~f~sa~l~K~~~GGw~pl~ia---~~~~~iM~~W~~G~~~~~ 249 (522)
|.+.|+ -++|-.+.|++.|..-=++...|.+ .+=+||++++- .++|.-.++|-|-+....
T Consensus 126 m~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~---L~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 126 MWLLRELGASFWTILAFCLAFLLAIVLLIIAVL---LHQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp --------------------------------------------------------------------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 333444 4677778888777654444445544 46799999875 457777889998877654
No 20
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=21.79 E-value=74 Score=33.59 Aligned_cols=160 Identities=16% Similarity=0.099 Sum_probs=82.7
Q ss_pred eeecceeeeecchhhhhhccCCCCccceeeehhhhhhhHHHHhcccchhhhccCcCc-cccccc------ceeeec-ccc
Q 009924 14 MSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVL-DNDYRI------GFYVSV-PEK 85 (522)
Q Consensus 14 ~~LG~V~L~iTG~EAlyADlGHFg~~~I~~aw~~~V~P~Lll~Y~GQaA~l~~~~~~-p~~~~n------pFy~~~-P~~ 85 (522)
..++..+.+.+|-|+.=.-.+-.-+|.+..+=..-+.-+.++.-+..-++...-|.+ .+..+| .+++.. .++
T Consensus 192 ~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (426)
T PF13520_consen 192 AGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAVGGSW 271 (426)
T ss_dssp HHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHHHCCT
T ss_pred hHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhccccccc
Confidence 345667788899998655555554566665544323333333333333333332210 011112 233332 357
Q ss_pred chhhHHHHHHHHHHHhhhheeechhhHHHHHHHcCCCCceeEEecCCCcCCceechhhHHHHHHHhh-eee--EeeC---
Q 009924 86 LRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCL-AVT--IGFR--- 159 (522)
Q Consensus 86 ~~~P~~vlAtlAaIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmv~~~-~vv--~~F~--- 159 (522)
..+.+.+++.++.+-+-.+.+.+.--++.+.-+-|.+|+. ..+++| +| .|..-.++...+. ++. ..|-
T Consensus 272 ~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~~-~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~~~~~ 345 (426)
T PF13520_consen 272 LAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPKW-FAKVNK--FG---TPYNAIILVAVISSILLLLFLFIPQS 345 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSGG-GGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTTSSSS
T ss_pred cccccccccccccccccchhhcchhhcccccccccchhhh-hhhccc--cC---CceeeehhhhHHHHHHHHHHHhhhHH
Confidence 7788888888777776666666666677777888999942 222221 22 2554444433332 222 2232
Q ss_pred CcchhhhcccceeEeehhHH
Q 009924 160 DTKRMGNASGLAVITVMLVT 179 (522)
Q Consensus 160 ~s~~l~~AYGiaV~~~M~iT 179 (522)
+-+.+.+.+.+......+++
T Consensus 346 ~~~~l~~~~~~~~~~~~~~~ 365 (426)
T PF13520_consen 346 SFDILVSLSSVGYLISYILV 365 (426)
T ss_dssp HHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 23456666555555544444
No 21
>PRK10655 potE putrescine transporter; Provisional
Probab=21.60 E-value=2.7e+02 Score=29.81 Aligned_cols=15 Identities=27% Similarity=0.718 Sum_probs=10.9
Q ss_pred hHHHHHHHcCCCCce
Q 009924 111 SIIKQCSALGCFPRV 125 (522)
Q Consensus 111 Sii~Qai~Lg~fPr~ 125 (522)
-+...+-+-|.+|+.
T Consensus 297 R~~~~~a~dg~lP~~ 311 (438)
T PRK10655 297 QVFKSSADEGYFPKI 311 (438)
T ss_pred HHHHHHhcCCchhHH
Confidence 355666688999975
No 22
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=21.32 E-value=4.1e+02 Score=22.73 Aligned_cols=35 Identities=23% Similarity=0.462 Sum_probs=20.1
Q ss_pred HHHHHhhhcccCCccHHH-----HHHHHHHHHHHHhhhhHH
Q 009924 211 LYFSASLIKFLEGAWVPI-----ALAFIFLIVMCVWHYGTL 246 (522)
Q Consensus 211 ~f~sa~l~K~~~GGw~pl-----~ia~~~~~iM~~W~~G~~ 246 (522)
.+|...|..+.=||| |+ .-++++..+.+++-|..+
T Consensus 30 ~lfa~~Ln~~~~~Gf-Plgfw~aaQGsi~~fviLi~~Ya~~ 69 (81)
T PF13937_consen 30 ILFADELNQITFGGF-PLGFWFAAQGSIIVFVILIFVYAWR 69 (81)
T ss_pred HHHHHHHcCCeeCCC-ChHHHHHHHhHHHHHHHHHHHHHHH
Confidence 567888887777776 44 234444444444444433
No 23
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=20.99 E-value=1.3e+02 Score=32.70 Aligned_cols=26 Identities=19% Similarity=0.524 Sum_probs=18.3
Q ss_pred ccHHHHHHHHHHHHHHHhhhhHHHHH
Q 009924 224 AWVPIALAFIFLIVMCVWHYGTLKKY 249 (522)
Q Consensus 224 Gw~pl~ia~~~~~iM~~W~~G~~~~~ 249 (522)
-|.+++++.+++..+..|....++.+
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~~r~~~ 479 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYKGRKEF 479 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEeceeec
Confidence 59999998888777777765434333
Done!