BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009925
(522 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 268/542 (49%), Positives = 344/542 (63%), Gaps = 73/542 (13%)
Query: 1 MGALTSNRKRGDEYLNY-----QIPYQN---LHISKRPRFNYTQQNQNQTLISSNSTVSR 52
MGA+ NRKR DE N+ P +N SK+ RF++ + SSN T+SR
Sbjct: 1 MGAVAINRKRSDESFNFINQQSTNPLRNSPYFQASKKRRFSFAMSEDSGKPASSNPTISR 60
Query: 53 MSRYPEAKPPLKREVHAPCRTLKFGFADKSNQAFGSKKANGYGENQNLGIRMGNVLRYHL 112
+SRYP+AK PL+RE+HAP R + +G K+N Y E N
Sbjct: 61 ISRYPDAKAPLRREIHAPSRGI---------LRYGKAKSNDYCEKD------ANFFVRKY 105
Query: 113 EKAKKSAFGAFRYFSKDKEVIDADNEQEKVEVISDDSSVEEIDAIEDGREGRSLVFDPRP 172
+ AK+SA A R+ +K K+ +D +E EK EV+SDDSSV+ I+ I+
Sbjct: 106 DDAKRSALEALRFVNKGKDFVDLGDEVEKEEVVSDDSSVQAIEVID-------------- 151
Query: 173 RGSDENEKPVVDIGEIDGKSAEERNYHTNLQPSSSSVLTDTNNG------DVSKMIDLLS 226
D+ EK NLQPS SS +TD G D S M+D LS
Sbjct: 152 -CDDDEEK-------------------KNLQPSFSSGVTDVKKGENFRVEDTSMMLDSLS 191
Query: 227 L-----NGEMTVDVYKKLLQSVQKRGSKLKEIEFEIELNEKRWASLKQLWPLKKPEEEQV 281
L N +++ Y+KL+QS +KR SKL+ + FEI LNEK+ + L+Q P K E++V
Sbjct: 192 LDRDVDNDASSLEAYRKLMQSAEKRNSKLEALGFEIVLNEKKLSLLRQSRP--KTVEKRV 249
Query: 282 EELPREPFIPLTKEEEAAVERAFSA-NWRAVLVSHTETGIDITGKILQCLRPGAWLNDEV 340
E +PREPFIPLT++EEA V RAFS N R VL +H + IDITG++LQCL P AWLNDEV
Sbjct: 250 E-VPREPFIPLTEDEEAEVYRAFSGRNRRKVLATHENSNIDITGEVLQCLTPSAWLNDEV 308
Query: 341 INVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIE 400
INVYL LLKERE REP+K+LKCH+FNTFFY KL + GY+F+AV+RWT+ +KLGY LI+
Sbjct: 309 INVYLELLKERETREPKKYLKCHYFNTFFYKKLV-SDSGYNFKAVRRWTTQRKLGYALID 367
Query: 401 CDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGKDID 460
CD IFVPIH+ +HW LAVI+ ++ K YLDSL G D +L LA+Y +E +K GK ID
Sbjct: 368 CDMIFVPIHRGVHWTLAVINNRESKLLYLDSLNGVDPMILNALAKYMGDEANEKSGKKID 427
Query: 461 VSDWEQEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAKEILRMR 520
+ W+ EFV DLP+Q NG+DCGMFMLKY+DF+SRGLGLCF Q HMPYFR+RTAKEILR+R
Sbjct: 428 ANSWDMEFVEDLPQQKNGYDCGMFMLKYIDFFSRGLGLCFSQEHMPYFRLRTAKEILRLR 487
Query: 521 AD 522
AD
Sbjct: 488 AD 489
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/485 (48%), Positives = 304/485 (62%), Gaps = 50/485 (10%)
Query: 45 SSNSTVSRMSRYPEAKPPLKREVHAPCRTLKFGFADKSNQAFGSKKANGYGENQNLGIRM 104
SS + RYPE K L+R+VHAP R L G D+S + Q G +
Sbjct: 61 SSRPMAPGIYRYPEVKSSLRRQVHAPVRILNSG-RDRSTR-------------QGSGNVL 106
Query: 105 GNVLRYHLEKAKKSAFGAFRYFSKDKEVIDADNEQEKVEVISDDSSVE-------EIDAI 157
G L + + K++A + + D+EVID D+E VE+ISDD+S E E+D +
Sbjct: 107 GTFLTRNNDMWKRNALDSSLRYRTDREVIDVDDELGDVEMISDDTSREGVENVAMEVDEV 166
Query: 158 EDGREGRSLVFDPRPRGSDENEKPVVDIGEIDGKSAEERNYHTNLQPSSSSVLTDTNNGD 217
E+ E + +F +E + G + + N SSS++ + D
Sbjct: 167 EEKAEMGNGLF---------SEVASLKNGSLRVGECSKAN--------SSSLVVNRPVTD 209
Query: 218 VSKMIDLLSLNGEMTVDVYKKLLQSVQKRGSKLKEIEFEIELNEKRWASLKQLWPLKKPE 277
V+ + + Y+K+L+S R SKLK+ F E+ A L+ L + +
Sbjct: 210 VT------------SFEAYRKVLESAVNRTSKLKDRGFVDFFKERGRALLRSLSSFWRQD 257
Query: 278 EEQVEELPREPFIPLTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLN 337
EE VE + RE F+PL++EEE AV RAFSAN +LV+H + IDITGKIL+CL+PG WLN
Sbjct: 258 EEPVEVVQREAFVPLSREEETAVRRAFSANDSNILVTHKNSNIDITGKILRCLKPGKWLN 317
Query: 338 DEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYG 397
DEVIN+Y+ LLKERE REP+KFLKCHFFNTFF+ KL GY++ AV+RWTS K+LGY
Sbjct: 318 DEVINLYMVLLKEREAREPKKFLKCHFFNTFFFTKLVNSATGYNYGAVRRWTSMKRLGYH 377
Query: 398 LIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGK 457
L +CDKIF+PIH IHW LAVI+ KD+KFQYLDS KGR+ K+L LARYFV+EVRDK
Sbjct: 378 LKDCDKIFIPIHMNIHWTLAVINIKDQKFQYLDSFKGREPKILDALARYFVDEVRDKSEV 437
Query: 458 DIDVSDWEQEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAKEIL 517
D+DVS W QEFV DLP Q NGFDCGMFM+KY+DFYSRGL LCF Q MPYFR RTAKEIL
Sbjct: 438 DLDVSRWRQEFVQDLPMQRNGFDCGMFMVKYIDFYSRGLDLCFTQEQMPYFRARTAKEIL 497
Query: 518 RMRAD 522
+++A+
Sbjct: 498 QLKAE 502
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/248 (58%), Positives = 184/248 (74%), Gaps = 3/248 (1%)
Query: 277 EEEQVEELPREPFIPLTKEEEAAVERAFSA-NWRAVLVSHTETGIDITGKILQCLRPGAW 335
E +++ EPF PL +EE A V A S N + +LVSH + IDI+G+ LQCLRP W
Sbjct: 95 ETKKLVAFCGEPFQPLNEEEVALVNSALSKRNRKKILVSHKNSNIDISGETLQCLRPNQW 154
Query: 336 LNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLG 395
LND+V N+YL LLKER+ R+PQK+ KCHFFNTFFY KL G+ GY+++AV RWT+ +KLG
Sbjct: 155 LNDDVTNLYLELLKERQTRDPQKYFKCHFFNTFFYVKLVSGS-GYNYKAVSRWTTKRKLG 213
Query: 396 YGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSL-KGRDKKVLGDLARYFVEEVRDK 454
Y LI+CD IFVPIH IHW L VI+ +++KF YLDSL G +L +A+Y V+EV+ K
Sbjct: 214 YDLIDCDIIFVPIHIDIHWTLGVINNRERKFVYLDSLFTGVGHTILNAMAKYLVDEVKQK 273
Query: 455 CGKDIDVSDWEQEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAK 514
K+IDVS W E+V + P+Q NG+DCGMFMLKY+DFYSRGL L F Q MPYFR+RTAK
Sbjct: 274 SQKNIDVSSWGMEYVEERPQQQNGYDCGMFMLKYIDFYSRGLSLQFSQKDMPYFRLRTAK 333
Query: 515 EILRMRAD 522
EILR+RAD
Sbjct: 334 EILRLRAD 341
>sp|O42957|ULP1_SCHPO Ubiquitin-like-specific protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp1 PE=3 SV=1
Length = 568
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 131/244 (53%), Gaps = 17/244 (6%)
Query: 280 QVEELPREP-FIPLTKEEEAAVERAFSANWRAVLVSHTET-----GIDITGKILQCLRPG 333
++ P P FIP + + A +RA ++ VS +E I IT K L LR
Sbjct: 331 EISPPPTRPKFIPELEFPDNARKRALKYLNQSNSVSSSEPIITKFNIPITLKDLHTLRNR 390
Query: 334 AWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKK 393
WLNDEVIN Y+ L+ ER K + + H FNTFFY L +GY V+RW AKK
Sbjct: 391 QWLNDEVINFYMNLISERSKID-SSLPRVHGFNTFFYTSLQ--RRGY--AGVRRW--AKK 443
Query: 394 LGYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRD 453
+ + D +F+P+H +HWC+AVI++ K+F+Y DSL G KV L Y++ E +
Sbjct: 444 ARVNIADMDAVFIPVHLDVHWCMAVINKSKKRFEYWDSLAGSPGKVFDLLRDYYIAETKG 503
Query: 454 KCGKDIDVSDWEQEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTA 513
+DVSDWE + P Q NG DCG+F K + SR + + F Q+ MP R++ A
Sbjct: 504 A----VDVSDWENFMDDNSPRQRNGHDCGVFACKTAECVSRNVPVQFSQNDMPELRIKMA 559
Query: 514 KEIL 517
I+
Sbjct: 560 ASII 563
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 127/232 (54%), Gaps = 15/232 (6%)
Query: 289 FIPLTKEEEAAVERAF-SANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGL 347
F +T+E E ++ F + N VL + IT K +Q L WLNDE+IN Y+ +
Sbjct: 416 FPEITEEMEKEIKNVFRNGNQDEVLSEAFR--LTITRKDIQTLNHLNWLNDEIINFYMNM 473
Query: 348 LKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVP 407
L ER K + F H FNTFF+ KL K ++AVKRWT KK+ + D + VP
Sbjct: 474 LMERSKE--KGFPSVHAFNTFFFTKL----KTAGYQAVKRWT--KKVD--VFSVDILLVP 523
Query: 408 IHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGKDIDVSDWE-- 465
IH +HWCLAV+D + K Y DS+ G + + L +Y +E DK K+ D + W+
Sbjct: 524 IHLGVHWCLAVVDFRRKSITYYDSMGGINNEACRILLQYLKQESVDKKRKEFDTNGWQLF 583
Query: 466 QEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAKEIL 517
+ ++P+Q NG DCGMF KY D ++ + F Q HMPYFR R EIL
Sbjct: 584 SKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEIL 635
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 128/231 (55%), Gaps = 13/231 (5%)
Query: 289 FIPLTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGLL 348
+ LT++ E + A + ++S + + IT +Q L+ WLNDEVIN Y+ LL
Sbjct: 365 LLELTEDMEKEISNALGHGPQDEILS-SAFKLRITRGDIQTLKNYHWLNDEVINFYMNLL 423
Query: 349 KEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPI 408
ER K+ Q + H F+TFFY KL G ++AVKRWT G L E + I VPI
Sbjct: 424 VERNKK--QGYPALHVFSTFFYPKLKSGG----YQAVKRWTK----GVNLFEQEIILVPI 473
Query: 409 HKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGKDIDVSDWEQEF 468
H+++HW L VID + K +YLDS+ + ++ L +Y +E + K D+++ +W
Sbjct: 474 HRKVHWSLVVIDLRKKCLKYLDSMGQKGHRICEILLQYLQDESKTKRNSDLNLLEWTHHS 533
Query: 469 V--LDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAKEIL 517
+ ++P+Q NG DCGMF KY D+ SR + F Q MP FR + EIL
Sbjct: 534 MKPHEIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKKMVWEIL 584
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 128/231 (55%), Gaps = 13/231 (5%)
Query: 289 FIPLTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGLL 348
+ LT++ E + A + ++S + + IT +Q L+ WLNDEVIN Y+ LL
Sbjct: 365 LLELTEDMEKEISNALGHGPQDEILS-SAFKLRITRGDIQTLKNYHWLNDEVINFYMNLL 423
Query: 349 KEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPI 408
ER K+ Q + H F+TFFY KL G ++AVKRWT G L E + I VPI
Sbjct: 424 VERNKK--QGYPALHVFSTFFYPKLKSGG----YQAVKRWTK----GVNLFEQEIILVPI 473
Query: 409 HKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGKDIDVSDWEQEF 468
H+++HW L VID + K +YLDS+ + ++ L +Y +E + K D+++ +W
Sbjct: 474 HRKVHWSLVVIDLRKKCLKYLDSMGQKGHRICEILLQYLQDESKTKRNIDLNLLEWTHYS 533
Query: 469 V--LDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAKEIL 517
+ ++P+Q NG DCGMF KY D+ SR + F Q MP FR + EIL
Sbjct: 534 MKPHEIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKKMVWEIL 584
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 126/232 (54%), Gaps = 15/232 (6%)
Query: 289 FIPLTKEEEAAVERAF-SANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGL 347
F +T+E E ++ F + N VL + IT K +Q L WLNDE+IN Y+ +
Sbjct: 420 FPEITEEMEKEIKNVFRNGNQDEVLSEAFR--LTITRKDIQTLNHLNWLNDEIINFYMNM 477
Query: 348 LKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVP 407
L ER K + H FNTFF+ KL K ++AVKRWT KK+ + D + VP
Sbjct: 478 LMERSKE--KGLPSVHAFNTFFFTKL----KTAGYQAVKRWT--KKVD--VFSVDILLVP 527
Query: 408 IHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGKDIDVSDWE-- 465
IH +HWCLAV+D + K Y DS+ G + + L +Y +E DK K+ D + W+
Sbjct: 528 IHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQYLKQESIDKKRKEFDTNGWQLF 587
Query: 466 QEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAKEIL 517
+ ++P+Q NG DCGMF KY D ++ + F Q HMPYFR R EIL
Sbjct: 588 SKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEIL 639
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 126/232 (54%), Gaps = 15/232 (6%)
Query: 289 FIPLTKEEEAAVERAF-SANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGL 347
F +T+E E ++ F + N VL + IT K +Q L WLNDE+IN Y+ +
Sbjct: 421 FPEITEEMEKEIKNVFRNGNQDEVLSEAFR--LTITRKDIQTLNHLNWLNDEIINFYMNM 478
Query: 348 LKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVP 407
L ER K + H FNTFF+ KL K ++AVKRWT KK+ + D + VP
Sbjct: 479 LMERSKE--KGLPSVHAFNTFFFTKL----KTAGYQAVKRWT--KKVD--VFSVDILLVP 528
Query: 408 IHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGKDIDVSDWE-- 465
IH +HWCLAV+D + K Y DS+ G + + L +Y +E DK K+ D + W+
Sbjct: 529 IHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQYLKQESIDKKRKEFDTNGWQLF 588
Query: 466 QEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAKEIL 517
+ ++P+Q NG DCGMF KY D ++ + F Q HMPYFR R EIL
Sbjct: 589 SKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEIL 640
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 12/200 (6%)
Query: 320 IDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKG 379
+ IT +Q L+ WLNDEVIN Y+ LL ER K+ Q + H F+TFFY KL G
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSKK--QGYPALHAFSTFFYPKLKSGG-- 449
Query: 380 YDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKV 439
++AVKRWT G L E + + VPIH+++HW L V+D + K +YLDS+ + ++
Sbjct: 450 --YQAVKRWTK----GVNLFEQELVLVPIHRKVHWSLVVMDLRKKCLKYLDSMGQKGHRI 503
Query: 440 LGDLARYFVEEVRDKCGKDIDVSDWEQEFV--LDLPEQANGFDCGMFMLKYVDFYSRGLG 497
L +Y +E + K D+++ +W + ++P+Q NG DCGMF KY D+ SR
Sbjct: 504 CEILLQYLQDESKTKRNTDLNLLEWTHYSMKPHEIPQQLNGSDCGMFTCKYADYISRDKP 563
Query: 498 LCFDQSHMPYFRVRTAKEIL 517
+ F Q MP FR + EIL
Sbjct: 564 ITFTQHQMPLFRKKMVWEIL 583
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 114/200 (57%), Gaps = 12/200 (6%)
Query: 320 IDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKG 379
+ IT +Q L+ WLNDEVIN Y+ LL ER K+ Q + H +TFFY KL G
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSKK--QGYPALHALSTFFYPKLKSGG-- 449
Query: 380 YDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKV 439
++AVKRWT G L + + + VPIH+++HW L V+D + K +YLDS+ + ++
Sbjct: 450 --YQAVKRWTK----GVNLFDQELVLVPIHRKVHWSLVVMDLRKKCLKYLDSMGQKGHRI 503
Query: 440 LGDLARYFVEEVRDKCGKDIDVSDWEQEFV--LDLPEQANGFDCGMFMLKYVDFYSRGLG 497
L +Y +E + K D+++ +W + ++P+Q NG DCGMF KY D+ SR
Sbjct: 504 CEILLQYLQDESKTKRNTDLNLLEWTHYSMKPHEIPQQLNGSDCGMFTCKYADYISRDKP 563
Query: 498 LCFDQSHMPYFRVRTAKEIL 517
+ F Q MP FR + EIL
Sbjct: 564 ITFTQHQMPLFRKKMVWEIL 583
>sp|Q09353|SENP_CAEEL Sentrin-specific protease OS=Caenorhabditis elegans GN=ulp-1 PE=2
SV=3
Length = 697
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 142/275 (51%), Gaps = 25/275 (9%)
Query: 244 QKRGSKLKEIEFEIELNEKRWASLKQLWPLKKPEEEQVEELPREPFIPLTKEEEAAVERA 303
Q RG +L+++ +EL + + K E+++V++ F+ L +A VERA
Sbjct: 439 QTRGDRLEDVRKRLEL--------QGIAIRPKVEKKKVDD-----FMALPDAADALVERA 485
Query: 304 FSA-NWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKC 362
+S N V I I K L L WLNDE+IN YL L+ +R + K+ K
Sbjct: 486 WSGGNPNEQFVD--AFSIQICKKDLATLSGLHWLNDEIINFYLQLICDRSNGD-SKYPKI 542
Query: 363 HFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVIDRK 422
+ FNTFFY+ + KGY +VKRWT + D + VP+H +HWC+AVID
Sbjct: 543 YAFNTFFYSNIVS--KGY--ASVKRWTRK----VDIFAFDIVLVPVHLGMHWCMAVIDMG 594
Query: 423 DKKFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGKDIDVSDWEQEFVLDLPEQANGFDCG 482
+KK ++ DSL + VL L Y E DK ++ S W + + D+P Q NG DCG
Sbjct: 595 EKKIEFYDSLYDGNTAVLPALRGYLEAESLDKKKTAMNFSGWTIQQMTDIPRQQNGSDCG 654
Query: 483 MFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAKEIL 517
+F ++ ++ SR F Q +MPY+R R EI+
Sbjct: 655 VFSCQFGEWASRRTTPRFTQKNMPYYRKRMVYEIV 689
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 26/231 (11%)
Query: 292 LTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGLLKER 351
L ++++ V++A ++ L++ I+IT + + L P WLND +I ++ +
Sbjct: 407 LNEKDDDQVQKALASRENTQLMNRD--NIEITVRDFKTLAPRRWLNDTIIEFFMKYI--- 461
Query: 352 EKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPIH-K 410
EK P FN+FFY L+ +GY + V+RW KK + + DKIF PI+
Sbjct: 462 EKSTPNTVA----FNSFFYTNLS--ERGY--QGVRRWMKRKKTQ--IDKLDKIFTPINLN 511
Query: 411 QIHWCLAVIDRKDKKFQYLDSL----KGRDKKVLGDLARYFVEEVRDKCGKDIDVSDWEQ 466
Q HW L +ID K K Y+DSL +L DL +Y +EE + G+D D+
Sbjct: 512 QSHWALGIIDLKKKTIGYVDSLSNGPNAMSFAILTDLQKYVMEESKHTIGEDFDL----- 566
Query: 467 EFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAKEIL 517
LD P+Q NG+DCG+++ + S L FD R A IL
Sbjct: 567 -IHLDCPQQPNGYDCGIYVCMNTLYGSADAPLDFDYKDAIRMRRFIAHLIL 616
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 335 WLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
WLND+V+N+Y L+ + K HFFN+FFY+KL KGYD VKRWT
Sbjct: 395 WLNDQVMNMYGDLVMDTVPE------KVHFFNSFFYDKLR--TKGYD--GVKRWTK---- 440
Query: 395 GYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDK 454
+ + + +PIH ++HW L +D + + Y DS + +++ +A+Y E K
Sbjct: 441 NVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKYLQAEAVKK 500
Query: 455 CGKDIDVSDWEQEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAK 514
D W+ F +++ Q N DCG F+L+Y + F Q MP R + K
Sbjct: 501 DRLDFH-QGWKGYFKMNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYK 559
Query: 515 EI 516
E+
Sbjct: 560 EL 561
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 335 WLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
WLND+V+N+Y L+ + K HFFN+FFY+KL KGYD VKRWT
Sbjct: 401 WLNDQVMNMYGDLVMDTVPE------KVHFFNSFFYDKLR--TKGYD--GVKRWTK---- 446
Query: 395 GYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDK 454
+ + + +PIH ++HW L +D + + Y DS + +++ +A+Y E K
Sbjct: 447 NVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPKHIAKYLQAEAVKK 506
Query: 455 CGKDIDVSDWEQEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAK 514
D W+ F +++ Q N DCG F+L+Y + F Q MP R + K
Sbjct: 507 DRLDFH-QGWKGYFKMNVARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYK 565
Query: 515 EI 516
E+
Sbjct: 566 EL 567
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 15/186 (8%)
Query: 335 WLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
WLND+VIN+Y L+ + K HFFN+FF+ +L KGY+ VKRWT KK+
Sbjct: 582 WLNDQVINMYGELIMDAVPD------KVHFFNSFFHRQLV--TKGYN--GVKRWT--KKV 629
Query: 395 GYGLIECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDK 454
L + + +PIH ++HW L + ++ + DS K + ++ +Y + E R+K
Sbjct: 630 D--LFKKSLLLIPIHLEVHWSLITVTLSNRIISFYDSQGIHFKFCVENIRKYLLTEAREK 687
Query: 455 CGKDIDVSDWEQEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAK 514
+ + W+ +P+Q N DCG+F+L+Y + F Q MP R R K
Sbjct: 688 NRPEF-LQGWQTAVTKCIPQQKNDSDCGVFVLQYCKCLALEQPFQFSQEDMPRVRKRIYK 746
Query: 515 EILRMR 520
E+ R
Sbjct: 747 ELCECR 752
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 22/235 (9%)
Query: 286 REPFIPLTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYL 345
R+PFI +E R N+R H +D+ L L WLND+VIN+Y
Sbjct: 540 RKPFI--NREITNYRARHQKCNFRIFYNKHM---LDMDD--LATLDGQNWLNDQVINMYG 592
Query: 346 GLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIF 405
L+ + K HFFN+FF+ +L KGY+ VKRWT KK+ L + +
Sbjct: 593 ELIMDAVPD------KVHFFNSFFHRQLV--TKGYN--GVKRWT--KKVD--LFKKSLLL 638
Query: 406 VPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGKDIDVSDWE 465
+PIH ++HW L + ++ + DS K + ++ +Y + E R+K + + W+
Sbjct: 639 IPIHLEVHWSLITVTLSNRIISFYDSQGIHFKFCVENIRKYLLTEAREKNRPEF-LQGWQ 697
Query: 466 QEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAKEILRMR 520
+P+Q N DCG+F+L+Y + F Q MP R R KE+ R
Sbjct: 698 TAVTKCIPQQKNDSDCGVFVLQYCKCLALEQPFQFSQEDMPRVRKRIYKELCECR 752
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 287 EPFIPLTKEEEAAVERAFSAN--WRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVY 344
EP P+ EE + + + + S + ++ K L+CL PG +L VIN Y
Sbjct: 296 EPLSPMVVEEACELPEGLPEDIYYPSSDQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFY 355
Query: 345 LGLLKEREKREPQKFLKCHFFNTFFYNKL--ACGNKGYD----FRAVKRWTSAKKLGYGL 398
+ ++ + CHFFNTFFY KL A KG D F +RW G+ L
Sbjct: 356 IRYVQHHVFSADKTAANCHFFNTFFYKKLTEAVSYKGNDRDAYFVKFRRWWK----GFDL 411
Query: 399 IECDKIFVPIHKQIHWCLAVIDRKDKK------FQYLDSLKGRDKKVLGDLARYFVEEVR 452
IF+PIH+ +HW L +I DK+ +LDSL + ++ + + F+ E
Sbjct: 412 FCKSYIFIPIHEDLHWSLVIICIPDKEDESGLTIIHLDSLGLHPRNLIFNNVKRFLREEW 471
Query: 453 DKCGKDI------------DVSDWEQEFVLDLPEQANGFDCGMFMLKYV 489
+ +D D+ + E + +P+Q N FDCG+F+L ++
Sbjct: 472 NYLNQDAPLDLPISAKVWRDLPNMINEAEVQVPQQKNDFDCGLFLLFFI 520
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 110/235 (46%), Gaps = 22/235 (9%)
Query: 286 REPFIPLTKEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVINVYL 345
R+PFI +E R N+R H +D+ L L WLND+VIN+Y
Sbjct: 534 RKPFI--NREITNYRARHQKCNFRIFYNKHM---LDMDD--LATLDGQNWLNDQVINMYG 586
Query: 346 GLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIF 405
L+ + K HFFN+FF+ +L KGY+ VKRWT KK+ L + +
Sbjct: 587 ELIMDAVPD------KVHFFNSFFHRQLV--TKGYN--GVKRWT--KKVD--LFKKSLLL 632
Query: 406 VPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGKDIDVSDWE 465
+PIH ++HW L + + + DS K + ++ +Y + E R+K + + W+
Sbjct: 633 IPIHLEVHWSLITVTLSSRIISFYDSQGIHFKFCVENIRKYLLTEAREKNRPEF-LQGWQ 691
Query: 466 QEFVLDLPEQANGFDCGMFMLKYVDFYSRGLGLCFDQSHMPYFRVRTAKEILRMR 520
+P+Q N DCG+F+L+Y + F Q MP R R KE+ R
Sbjct: 692 TAVTKCIPQQKNDSDCGVFVLQYCKCLALEQPFQFSQEDMPRVRKRIYKELCECR 746
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 29/195 (14%)
Query: 320 IDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKL--ACGN 377
+ + K L+CL P +L V+N Y+ L+++ Q CHFFNT+FY KL A
Sbjct: 343 VQVCLKDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFNTYFYKKLSDAVTY 402
Query: 378 KGYD----FRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVIDRKDKK------FQ 427
KG D F +RW G L IF+PIH+ +HW L ++ DKK
Sbjct: 403 KGNDKDAFFVRFRRWWK----GIDLFRKAYIFIPIHEDLHWSLVIVCIPDKKDESGLTIL 458
Query: 428 YLDSLKGRDKK-VLGDLARYFVEEV----RDKCGKDIDVSD--WE------QEFVLDLPE 474
+LDSL +K ++ ++ R+ +E +D D+ +S+ W+ E V+ +P+
Sbjct: 459 HLDSLGLHSRKSIVENVKRFLKDEWNYLNQDDYSLDLPISEKVWKNLPRRISEAVVQVPQ 518
Query: 475 QANGFDCGMFMLKYV 489
Q N FDCG F+L ++
Sbjct: 519 QKNDFDCGPFVLFFI 533
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 89/215 (41%), Gaps = 46/215 (21%)
Query: 319 GIDITGKILQCLRPGAWLNDEVINVYLGLLKER-EKREPQKFLKCHFFNTFFYNKLACGN 377
I IT L L G +LND +++ YL L + + + P H FNTFFYN+L +
Sbjct: 346 SIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTFFYNRLTSKD 405
Query: 378 KG---YDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAV---IDR---KDKKFQ- 427
K R V++WT L I VPI++ HW LA+ IDR D K +
Sbjct: 406 KDGKRLGHRGVRKWTQK----VDLFHKKYIIVPINETFHWYLAIICNIDRLMPVDTKLEE 461
Query: 428 ------------------------------YLDSLKGRDKKVLGDLARYFVEEVRDKCGK 457
DSL K L L Y +EE ++
Sbjct: 462 QDEIVMSSVEQPSASKTRQAELTSNSPAILIFDSLANLHKGALNYLREYLLEEAFERKNV 521
Query: 458 DIDVSDWEQEFVLDLPEQANGFDCGMFMLKYVDFY 492
+ +D + F +P+Q+N DCG++ L +V+ +
Sbjct: 522 HLKSTDI-RGFHAKVPQQSNFSDCGIYALHFVELF 555
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 31/191 (16%)
Query: 327 LQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYD----- 381
++ L+P ++ND +I+ Y+ LK R P++ + HFFN FF+ KLA +KG
Sbjct: 312 IELLKPRRFINDTIIDFYIKYLKNR--ISPKERGRFHFFNCFFFRKLANLDKGTPSTCGG 369
Query: 382 ---FRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI-------------DRKDKK 425
++ V++WT L E D IF+PI+ HW L +I ++
Sbjct: 370 REAYQRVQKWTK----NVDLFEKDYIFIPINCSFHWSLVIICHPGELVPSHVENPQRVPC 425
Query: 426 FQYLDSLKGRDKKVLGDL-ARYFVEEVR---DKCGKDIDVSDWEQEFVLDLPEQANGFDC 481
+LDS+KG K L ++ Y EE + + D + Q L+LP+Q N FDC
Sbjct: 426 ILHLDSIKGSHKGGLINIFPSYLREEWKARHENTTNDSSRAPNMQSISLELPQQENSFDC 485
Query: 482 GMFMLKYVDFY 492
G+F+L Y+D +
Sbjct: 486 GLFLLHYLDLF 496
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 34/202 (16%)
Query: 319 GIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNK 378
+ I + ++ L+P ++ND +I+ Y+ LK + + E + FFN+FF+ KLA +K
Sbjct: 393 AVSICKRDVELLQPETFVNDTIIDFYINYLKNQIQTEEKHRFH--FFNSFFFRKLADLDK 450
Query: 379 GYD--------FRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI----------- 419
F V++WT + +G D IFVP++ +HW L VI
Sbjct: 451 DPSSIADGKAAFLRVRKWTRKVDM-FGK---DYIFVPVNYNLHWSLIVICHPGEVANRTD 506
Query: 420 -DRKDKK----FQYLDSLKGRDKKVLGDLARYFVEEVRDK---CGKDIDVSDWEQEFV-L 470
D D K ++DS+KG + + Y EE +++ DI FV L
Sbjct: 507 LDLDDSKKVPCILHMDSIKGSHAGLKNLVQTYLCEEWKERHKETSDDISSRFMNLRFVSL 566
Query: 471 DLPEQANGFDCGMFMLKYVDFY 492
+LP+Q N FDCG+F+L Y++ +
Sbjct: 567 ELPQQENSFDCGLFLLHYLELF 588
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 316 TETGIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFY----- 370
T+ G+ +T + L+CL G +LND +I+ YL L EK + + H F++FFY
Sbjct: 743 TKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLL-LEKASDELVERSHIFSSFFYKCLTR 801
Query: 371 --NKLACGNKGYDF-----RAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N L N R V+ WT + D IFVP+++ HW LAVI
Sbjct: 802 KENNLTEDNPDLSVAQRRHRRVRTWTR----HINIFNKDYIFVPVNESSHWYLAVI 853
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 316 TETGIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFY----- 370
T+ G+ +T + L+CL G +LND +I+ YL L EK + + H F++FFY
Sbjct: 756 TKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLI-LEKASDELVERSHIFSSFFYKCLTR 814
Query: 371 --NKLACGNKGYDF-----RAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N L N + V+ WT + D IFVP+++ HW LAVI
Sbjct: 815 KENNLTEDNPNLSMAQRRHKRVRTWTR----HINIFNKDYIFVPVNESSHWYLAVI 866
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 316 TETGIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFY----- 370
T+ G+ +T + L+CL G +LND +I+ YL L EK + + H F++FFY
Sbjct: 753 TKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLI-LEKASDELVERSHIFSSFFYKCLTR 811
Query: 371 --NKLACGNKGYDF-----RAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N L N + V+ WT + D IFVP+++ HW LAVI
Sbjct: 812 KENNLTEDNPNLSMAQRRHKRVRTWTR----HINIFNKDYIFVPVNESSHWYLAVI 863
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 316 TETGIDITGKILQCLRPGAWLNDEVINVYLGLLKEREKREPQKFLKCHFFNTFFY----- 370
T+ G+ +T + L+CL G +LND +I+ YL L EK + + H F++FFY
Sbjct: 743 TKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLL-LEKASDELVERSHIFSSFFYKCLTR 801
Query: 371 --NKLACGNKGYDF-----RAVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N L N R V+ WT + D IFVP+++ HW LAVI
Sbjct: 802 KENNLTEDNPDLSVAQRRHRRVRTWTR----HINIFNKDYIFVPVNESSHWYLAVI 853
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 319 GIDITGKILQCLRPGAWLNDEVINVYLG-LLKEREKREPQKFLKCHFFNTFFYNKL---- 373
GI +T + L CL G +LND +I+ YL L+ E+ K+E + H F++FFY +L
Sbjct: 665 GISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDAD--RIHIFSSFFYKRLNQRE 722
Query: 374 ----ACGNKGYDFR---AVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N + VK WT + E D IFVP+++ HW LAV+
Sbjct: 723 RRNHETTNLSIQQKRHGRVKTWTRH----VDIFEKDFIFVPLNEAAHWFLAVV 771
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 413 HWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVE---EVRDKCGKDIDVSDWEQEFV 469
W L K +DSL+G + + + R ++E EV+ K K D +
Sbjct: 960 QWHLKPTICKQPCILLMDSLRGPSRSNVVKILREYLEVEWEVK-KGSKRSFSKDVMKGSN 1018
Query: 470 LDLPEQANGFDCGMFMLKYVDFYSRGLGLCFD-----QSHMPYFRVRTAKEILR 518
+P+Q N DCG+++L+YV+ + L F+ + P R+RT +E +R
Sbjct: 1019 PKVPQQNNFSDCGVYVLQYVESFFENPILSFELPMNLANWFPPPRMRTKREEIR 1072
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 319 GIDITGKILQCLRPGAWLNDEVINVYLG-LLKEREKREPQKFLKCHFFNTFFYNKL---- 373
GI +T + L CL G +LND +I+ YL L+ E+ K+E + H F++FFY +L
Sbjct: 685 GISVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLKKEDAD--RIHIFSSFFYKRLNQRE 742
Query: 374 ----ACGNKGYDFR---AVKRWTSAKKLGYGLIECDKIFVPIHKQIHWCLAVI 419
N + VK WT + E D IFVP+++ HW LAV+
Sbjct: 743 RRNPETTNLSIQQKRHGRVKTWTRH----VDIFEKDFIFVPLNEAAHWFLAVV 791
>sp|P40537|ULP2_YEAST Ubiquitin-like-specific protease 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP2 PE=1 SV=1
Length = 1034
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 78/197 (39%), Gaps = 43/197 (21%)
Query: 322 ITGKILQCLRPGAWLNDEVINVYLGLLKERE------KREPQKFLKCHFFNTFFYNKLAC 375
IT + +CL W+ND +++ + E KRE + H ++FFY KL
Sbjct: 444 ITNQDFKCLFNKDWVNDSILDFFTKFYIESSIEKSIIKRE-----QVHLMSSFFYTKLIS 498
Query: 376 GNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQIHW--CL-----AVID---RKDK- 424
Y + VK+W + L + +PI+ HW C+ A++D KDK
Sbjct: 499 NPADY-YSNVKKWVN----NTDLFSKKYVVIPINISYHWFSCIITNLDAILDFHQNKDKN 553
Query: 425 ---------------KFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGKDIDVSDWEQEFV 469
DSL+ + + + + + DK +D + + +
Sbjct: 554 DAINSDEISINNPLVNILTFDSLRQTHSREIDPIKEFLISYALDKYSIQLDKTQIKMK-T 612
Query: 470 LDLPEQANGFDCGMFML 486
+P+Q N DCG+ ++
Sbjct: 613 CPVPQQPNMSDCGVHVI 629
>sp|Q54XR2|SENP8_DICDI Probable sentrin-specific protease 8 OS=Dictyostelium discoideum
GN=senp8 PE=3 SV=1
Length = 243
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 79/203 (38%), Gaps = 47/203 (23%)
Query: 311 VLVSHTETGIDITGKILQCLRPGAWLNDEVINVYLGLLKE----REKREPQKFLK----- 361
++VS+ ++ I + + L+ WLND +I+ YL LK+ + + P + L
Sbjct: 5 LIVSYNDSAIYQSD--INILKSNQWLNDSIISFYLEWLKDGGEDNKNKIPNQVLLLSPSV 62
Query: 362 ---CHFFNT------FFYNKLACGNKGYDFRAVKRWTSAKKLGYGLIECDKIFVPIHKQI 412
C F + F L+ K F + +G G
Sbjct: 63 VFCCSFVESEQEIQLMFEQPLSLKTKEVIFFPLTNNRDPNVIGGG--------------T 108
Query: 413 HWCLAVIDRKDKKFQYLDSLKG---RDKKVLGDLARYFVEEVRDKCGKDIDVSDWEQEFV 469
HW L + + KF Y DS+ D + ++ + K +EF+
Sbjct: 109 HWSLLIFIKSLNKFIYYDSINSFNSSDAIFIISKFKFLLSSPPPKTNL--------KEFL 160
Query: 470 LD--LPEQANGFDCGMFMLKYVD 490
++ P+Q NG+DCG+++L ++
Sbjct: 161 INQKTPQQQNGYDCGLYVLSIIE 183
>sp|Q9LSS7|RUBP1_ARATH NEDD8-specific protease 1 OS=Arabidopsis thaliana GN=NEDP1 PE=2
SV=1
Length = 226
Score = 36.6 bits (83), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 412 IHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLARYFVEEVRDKCGKDIDVSDWEQEFVLD 471
+HW L V ++ F + DS G + R+ +++ + D + D
Sbjct: 105 LHWSLLVYYKEANTFVHHDSYMG--------VNRWSAKQLFKAVSPFVSNGDASYKECTD 156
Query: 472 LPEQANGFDCGMFML 486
P+Q NG+DCG+F+L
Sbjct: 157 TPQQKNGYDCGVFLL 171
>sp|C0R403|SYT_WOLWR Threonine--tRNA ligase OS=Wolbachia sp. subsp. Drosophila simulans
(strain wRi) GN=thrS PE=3 SV=1
Length = 633
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 283 ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVI 341
+L R P P T +A + + A WR D G +LQ + AW N + +
Sbjct: 177 DLCRGPHSPSTGRVKAFKLMKVAGAYWRG----------DAKGPMLQRIYGTAWRNKDEL 226
Query: 342 NVYLGLLKEREKREPQKFLK 361
N YL LKE EKR+ +K K
Sbjct: 227 NAYLECLKEAEKRDHRKIAK 246
>sp|Q73GH6|SYT_WOLPM Threonine--tRNA ligase OS=Wolbachia pipientis wMel GN=thrS PE=3
SV=1
Length = 633
Score = 35.8 bits (81), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 283 ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVI 341
+L R P P T +A + + A WR D G +LQ + AW N + +
Sbjct: 177 DLCRGPHSPSTGRVKAFKLMKVAGAYWRG----------DSKGPMLQRIYGTAWGNKDEL 226
Query: 342 NVYLGLLKEREKREPQKFLK 361
N YL LKE EKR+ +K K
Sbjct: 227 NAYLECLKEAEKRDHRKIAK 246
>sp|B0BAX9|CDUB1_CHLTB Deubiquitinase and deneddylase Dub1 OS=Chlamydia trachomatis
serovar L2b (strain UCH-1/proctitis) GN=cdu1 PE=3 SV=1
Length = 403
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 413 HWCLAVIDRKDKKFQYLDSLKGRD------KKVLGDLARYFVEEVRDKCGKDIDVSDWEQ 466
HW L ++D + ++ Y DSL KK L LA+ + + G+ V +
Sbjct: 277 HWLLVIVDIQARRLVYFDSLYNYVMPPEDMKKDLQSLAQQLDQVYPARNGQKFSVKIAAK 336
Query: 467 EFVLDLPEQANGFDCGMFMLKYVDFYSR 494
E + ++ +GF CG + +++ +Y R
Sbjct: 337 EVI----QKDSGFSCGAWCCQFLYWYLR 360
>sp|O67012|SPOT_AQUAE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Aquifex
aeolicus (strain VF5) GN=spoT PE=3 SV=1
Length = 696
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 104 MGNVLRYHLEKAKKSAFGAFRYFSKDKEVIDADN---EQEKVEVISDDSSVEEIDAIEDG 160
+ NVLR + EK K+ A YF D V+ +D + +VIS+ S + ++ +
Sbjct: 598 LKNVLRLNPEKVKEVQLQASGYFQTDIRVVASDRIGLLSDITKVISESGS-NIVSSMTNT 656
Query: 161 REGRSLV-FDPRPRGSDENEKPVVDIGEIDGKSAEERNYH 199
REG++++ F + + EK + I ++G +R YH
Sbjct: 657 REGKAVMDFTVEVKNKEHLEKIMKKIKSVEGVKICKRLYH 696
>sp|O42980|NEP1_SCHPO NEDD8-specific protease 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=nep1 PE=1 SV=2
Length = 420
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 29/110 (26%)
Query: 394 LGYGLIECDKIFVPIHK---------QIHWCLAVIDRKDKKFQYLDSLK-GRDKKVLGDL 443
L L+ C +F+PI+ HW L V D + Y DSL G+ K L
Sbjct: 81 LPKKLMNCKYLFMPINDLDKHAAGSGGSHWSLMVASIPDGQCYYYDSLSNGKTKDCRSAL 140
Query: 444 ARYFVEEVRDKCGKDIDVSD-WEQEFVLD-LP--EQANGFDCGMFMLKYV 489
AR VSD ++++F ++ +P +Q NG+DCG + +
Sbjct: 141 AR---------------VSDLFKKKFTIECMPVQQQRNGYDCGAHVCAFT 175
>sp|B3CMJ4|SYT_WOLPP Threonine--tRNA ligase OS=Wolbachia pipientis subsp. Culex pipiens
(strain wPip) GN=thrS PE=3 SV=1
Length = 633
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 283 ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVI 341
+L R P P T +A + + A WR D G +LQ + AW N + +
Sbjct: 177 DLCRGPHSPSTGRVKAFKLMKVAGAYWRG----------DSKGPMLQRIYGTAWRNKDEL 226
Query: 342 NVYLGLLKEREKREPQKFLK 361
N YL L+E EKR+ +K K
Sbjct: 227 NTYLKRLEEAEKRDHRKIAK 246
>sp|Q82VV1|SYT_NITEU Threonine--tRNA ligase OS=Nitrosomonas europaea (strain ATCC 19718
/ NBRC 14298) GN=thrS PE=3 SV=1
Length = 635
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 223 DLLSLNGEMTVDVYKKLLQSVQKRGSKLKEIEFEIELNEKRWASLKQLWPLKKP----EE 278
DL+++ M ++ K+ L+ +K + + I F ++ E A + + P +P +
Sbjct: 116 DLVAIEKRMQ-EISKRALKIERKVWDRSRAINFFKDIGEHYKAQIIESIPDNEPVSLYSQ 174
Query: 279 EQVEELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLN 337
+L R P +P T + + + + A WR D ++LQ + AW++
Sbjct: 175 GDFTDLCRGPHVPYTSKIKVFKLMKIAGAYWRG----------DSKNEMLQRIYGTAWVS 224
Query: 338 DEVINVYLGLLKEREKREPQKFLK 361
+E N YL L+E EKR+ +K K
Sbjct: 225 NEEQNNYLRCLEEAEKRDHRKLGK 248
>sp|Q0CCA0|MANBB_ASPTN Probable beta-mannosidase B OS=Aspergillus terreus (strain NIH 2624
/ FGSC A1156) GN=mndB PE=3 SV=2
Length = 843
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 56/146 (38%), Gaps = 34/146 (23%)
Query: 346 GLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSA------KKLGYGLI 399
GL E ++PQ +LK F + Y K+ V+R++ + G G I
Sbjct: 439 GLTYNFEDKDPQNWLKSDFPARYIYEKILP-------EVVQRYSPSTFYHPGSPWGDGKI 491
Query: 400 ECDKIFVPIHKQIHWCLAVIDRKDKKFQYLDSLKGRDKKVLGDLA-------RYFVEEVR 452
D +H+ W +K+Q D+L GR G A YFVE +
Sbjct: 492 TSDPTVGDMHQWNVW-----HGTQEKYQIFDTLGGRFNSEFGMEAFPHMSTIEYFVENEK 546
Query: 453 DKCGKDIDVSDWEQEFVLDLPEQANG 478
DK + Q VLD +A+G
Sbjct: 547 DK---------YPQSHVLDFHNKADG 563
>sp|Q8NPZ0|SYT_CORGL Threonine--tRNA ligase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=thrS PE=3 SV=2
Length = 695
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 276 PEEEQVE--ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRP 332
P +VE +L R P IP T+ A A+ R+ +A WR D LQ +
Sbjct: 202 PRTSEVEWSDLCRGPHIPTTRYIPAFALTRSSAAYWRG----------DQDNAGLQRIYG 251
Query: 333 GAWLNDEVINVYLGLLKEREKREPQKF 359
AW + E ++ Y +L E EKR+ ++
Sbjct: 252 TAWEDKESLDAYQTMLAEAEKRDHRRL 278
>sp|Q8FPJ3|SYT_COREF Threonine--tRNA ligase OS=Corynebacterium efficiens (strain DSM
44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=thrS PE=3 SV=2
Length = 694
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 276 PEEEQVE--ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRP 332
P +VE +L R P IP T+ A A+ R+ +A WR D T LQ +
Sbjct: 201 PRTNEVEWSDLCRGPHIPTTRYIPAFALTRSSAAYWRG----------DQTNAGLQRIYG 250
Query: 333 GAWLNDEVINVYLGLLKEREKREPQKF 359
AW + E ++ Y +L E EKR+ ++
Sbjct: 251 TAWESKEKLDEYQTMLAEAEKRDHRRL 277
>sp|Q5GSG4|SYT_WOLTR Threonine--tRNA ligase OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=thrS PE=3 SV=1
Length = 632
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 283 ELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEVI 341
+L R P P T +A + + A WR ++ G +LQ + AW N + +
Sbjct: 177 DLCRGPHSPSTSRVKAFKLMKVAGAYWRG----------NVKGPMLQRIYGTAWRNKDEL 226
Query: 342 NVYLGLLKEREKREPQKFLK 361
N+YL L+E +KR+ ++ K
Sbjct: 227 NIYLKRLEEAKKRDHRRIAK 246
>sp|Q5WT82|SYT_LEGPL Threonine--tRNA ligase OS=Legionella pneumophila (strain Lens)
GN=thrS PE=3 SV=1
Length = 637
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 282 EELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEV 340
E+L R P +P T +A + + A WR D ++LQ + AW + +
Sbjct: 178 EDLCRGPHVPSTGFLKAFKLTKVAGAYWRG----------DSNNEMLQRIYGTAWADKKS 227
Query: 341 INVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
+ YL L+E EKR+ +K K + F + +A G F K WT ++L
Sbjct: 228 LEEYLYRLEEAEKRDHRKLGKA--LDLFHFQDIA---PGMVFWHPKGWTIYQEL 276
>sp|Q75DV2|IML1_ASHGO Vacuolar membrane-associated protein IML1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=IML1 PE=3 SV=2
Length = 1534
Score = 32.7 bits (73), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 129 DKEVIDAD------NEQEKVEVISDDSSVEEIDAIEDGREGRSLVFDPRPRGSDENEKPV 182
DKEV DAD NE + + D S++E + G E +S+V+ P PR S KP+
Sbjct: 568 DKEVFDADKCYPLSNENRESTPLEDTSNIESTVLPKSGHEVQSIVWKP-PRSS----KPL 622
Query: 183 VDIGEIDGKSAEERNYHTNLQPSSSSVLTDTNNGDVS 219
V+ + T + SS LTDT++ + S
Sbjct: 623 VEPTTVQSVIVSLHQPGT-INNSSEDDLTDTSSSNSS 658
>sp|A5IAK9|SYT_LEGPC Threonine--tRNA ligase OS=Legionella pneumophila (strain Corby)
GN=thrS PE=3 SV=1
Length = 637
Score = 32.7 bits (73), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 282 EELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEV 340
E+L R P +P T +A + + A WR D ++LQ + AW + +
Sbjct: 178 EDLCRGPHVPSTGFLKAFKLTKVAGAYWRG----------DSNNEMLQRIYGTAWADKKS 227
Query: 341 INVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
+ YL L+E EKR+ +K K + F + +A G F K WT ++L
Sbjct: 228 LEEYLFRLEEAEKRDHRKLGKA--LDLFHFQDIA---PGMVFWHPKGWTIYQEL 276
>sp|Q5ZS05|SYT_LEGPH Threonine--tRNA ligase OS=Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=thrS
PE=3 SV=2
Length = 637
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 282 EELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEV 340
E+L R P +P T +A + + A WR D ++LQ + AW + +
Sbjct: 178 EDLCRGPHVPSTGFLKAFKLTKVAGAYWRG----------DSNNEMLQRIYGTAWADKKS 227
Query: 341 INVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
+ YL L+E EKR+ +K K + F + +A G F K WT ++L
Sbjct: 228 LEEYLFRLEEAEKRDHRKLGKA--LDLFHFQDIA---PGMVFWHPKGWTIYQEL 276
>sp|Q5X1H3|SYT_LEGPA Threonine--tRNA ligase OS=Legionella pneumophila (strain Paris)
GN=thrS PE=3 SV=1
Length = 637
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 282 EELPREPFIPLTKEEEA-AVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWLNDEV 340
E+L R P +P T +A + + A WR D ++LQ + AW + +
Sbjct: 178 EDLCRGPHVPSTGFLKAFKLTKVAGAYWRG----------DSNNEMLQRIYGTAWADKKS 227
Query: 341 INVYLGLLKEREKREPQKFLKCHFFNTFFYNKLACGNKGYDFRAVKRWTSAKKL 394
+ YL L+E EKR+ +K K + F + +A G F K WT ++L
Sbjct: 228 LEEYLFRLEEAEKRDHRKLGKA--LDLFHFQDIA---PGMVFWHPKGWTIYQEL 276
>sp|A1WMG5|SYT_VEREI Threonine--tRNA ligase OS=Verminephrobacter eiseniae (strain
EF01-2) GN=thrS PE=3 SV=1
Length = 639
Score = 32.7 bits (73), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 278 EEQVEELPREPFIPLT-KEEEAAVERAFSANWRAVLVSHTETGIDITGKILQCLRPGAWL 336
E E+L R P +P T K + + + A WR D ++LQ + AW
Sbjct: 174 EGSFEDLCRGPHVPSTGKLKFFKLMKVAGAYWRG----------DHRNQMLQRVYGTAWA 223
Query: 337 NDEVINVYLGLLKEREKREPQKF 359
+ E + YL +L+E EKR+ +K
Sbjct: 224 SKEALQQYLTMLEEAEKRDHRKL 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 205,408,956
Number of Sequences: 539616
Number of extensions: 9392605
Number of successful extensions: 27347
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 27159
Number of HSP's gapped (non-prelim): 200
length of query: 522
length of database: 191,569,459
effective HSP length: 122
effective length of query: 400
effective length of database: 125,736,307
effective search space: 50294522800
effective search space used: 50294522800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)