Query 009928
Match_columns 522
No_of_seqs 194 out of 379
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 16:05:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009928.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009928hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 98.6 5.7E-08 2E-12 95.6 8.2 199 2-242 56-264 (279)
2 3hve_A Gigaxonin; ubiquitin, c 98.4 1.9E-07 6.4E-12 90.7 4.9 198 2-241 52-256 (256)
3 2vkp_A BTB/POZ domain-containi 98.3 8.5E-07 2.9E-11 74.9 6.1 76 2-86 33-108 (109)
4 1buo_A POZ domain, protein (pr 98.3 9.6E-07 3.3E-11 76.6 6.1 72 2-86 49-120 (121)
5 2if5_A Zinc finger and BTB dom 98.2 1.4E-06 4.8E-11 75.0 5.7 75 2-84 46-120 (120)
6 3b84_A Zinc finger and BTB dom 98.2 1E-06 3.6E-11 76.3 4.7 73 2-86 45-117 (119)
7 3htm_A Speckle-type POZ protei 98.2 2.7E-06 9.3E-11 77.0 7.4 105 2-123 55-162 (172)
8 2vpk_A Myoneurin; transcriptio 98.1 2.8E-06 9.5E-11 72.9 6.1 72 2-85 43-116 (116)
9 1r29_A B-cell lymphoma 6 prote 98.1 4.3E-06 1.5E-10 72.8 6.6 75 2-85 50-125 (127)
10 2ppi_A Gigaxonin; BTB domain, 98.1 3.5E-06 1.2E-10 75.7 5.6 74 2-83 68-143 (144)
11 2yy9_A Zinc finger and BTB dom 98.1 1.9E-06 6.6E-11 76.4 3.6 74 2-87 46-119 (135)
12 2z8h_A Transcription regulator 98.0 7.3E-06 2.5E-10 72.7 6.8 76 2-87 57-133 (138)
13 4eoz_A Speckle-type POZ protei 98.0 1.5E-06 5.1E-11 76.6 2.2 94 2-112 46-139 (145)
14 2q81_A MIZ-1 protein; BTB/POZ 98.0 3.1E-06 1.1E-10 73.2 4.2 70 2-84 48-117 (119)
15 3ga1_A Nucleus accumbens-assoc 98.0 1.8E-06 6.2E-11 75.6 2.7 73 2-86 54-127 (129)
16 3ohu_A Transcription regulator 97.9 4.2E-06 1.4E-10 72.6 3.0 63 2-68 53-116 (125)
17 2ihc_A Transcription regulator 97.7 1.1E-05 3.8E-10 70.3 2.6 72 2-83 50-122 (124)
18 3fkc_A Transcriptional regulat 97.7 3.5E-05 1.2E-09 66.6 4.8 60 2-68 52-112 (116)
19 3m5b_A Zinc finger and BTB dom 97.7 2.8E-05 9.7E-10 67.9 4.2 57 21-85 61-117 (119)
20 3hqi_A Speckle-type POZ protei 97.6 5.7E-05 2E-09 75.1 6.4 106 2-124 195-303 (312)
21 4ajy_C Transcription elongatio 96.2 0.0071 2.4E-07 51.0 5.9 62 2-65 22-96 (97)
22 2ast_A S-phase kinase-associat 95.9 0.0048 1.7E-07 56.4 4.0 79 2-88 21-127 (159)
23 2p1m_A SKP1-like protein 1A; F 92.3 0.044 1.5E-06 50.3 1.7 75 2-87 24-125 (160)
24 1fs1_B SKP1, cyclin A/CDK2-ass 92.1 0.13 4.6E-06 46.1 4.5 74 2-87 22-121 (141)
25 2yy0_A C-MYC-binding protein; 84.5 1.6 5.3E-05 33.4 5.1 34 435-468 18-51 (53)
26 3v7d_A Suppressor of kinetocho 82.2 1.7 5.8E-05 40.1 5.5 77 2-86 27-132 (169)
27 3vmx_A Voltage-gated hydrogen 81.2 2.7 9.2E-05 31.7 5.1 36 436-471 4-39 (48)
28 2fnj_C Transcription elongatio 80.4 0.98 3.3E-05 37.9 2.9 63 2-66 21-96 (96)
29 1hv2_A Elongin C, ELC1; protei 74.7 1.7 5.9E-05 36.6 2.8 62 2-66 24-99 (99)
30 1deb_A APC protein, adenomatou 74.6 5.7 0.0002 30.2 5.2 38 433-470 14-51 (54)
31 3a2a_A Voltage-gated hydrogen 71.2 5.9 0.0002 30.6 4.7 34 438-471 13-46 (58)
32 1vcb_B Protein (elongin C); tu 64.1 2.9 9.9E-05 36.2 2.0 63 2-66 37-112 (112)
33 3vp9_A General transcriptional 64.1 7.4 0.00025 33.0 4.4 27 442-468 49-75 (92)
34 1vjh_A BET V I allergen family 52.9 9.9 0.00034 32.9 3.5 41 308-361 82-122 (122)
35 1dip_A Delta-sleep-inducing pe 41.3 27 0.00091 28.6 3.9 32 434-465 13-44 (78)
36 1pd7_B MAD1; PAH2, SIN3, eukar 33.6 14 0.00047 24.4 0.9 17 52-68 3-19 (26)
37 2wt7_B Transcription factor MA 32.0 68 0.0023 27.0 5.2 37 433-469 52-88 (90)
38 4dzn_A Coiled-coil peptide CC- 31.8 1E+02 0.0035 20.8 5.0 28 437-464 3-30 (33)
39 3i00_A HIP-I, huntingtin-inter 31.7 62 0.0021 28.4 5.2 18 433-450 19-36 (120)
40 1ci6_A Transcription factor AT 30.5 79 0.0027 24.5 5.0 29 437-465 31-59 (63)
41 2w6a_A ARF GTPase-activating p 27.8 46 0.0016 26.1 3.1 27 437-463 35-61 (63)
42 1use_A VAsp, vasodilator-stimu 26.6 82 0.0028 23.4 4.1 22 445-466 9-31 (45)
43 3b0b_C CENP-X, centromere prot 26.4 26 0.00091 28.8 1.7 42 275-319 7-48 (81)
44 1nkp_B MAX protein, MYC proto- 24.2 1E+02 0.0036 24.6 4.9 33 437-469 48-80 (83)
45 3lay_A Zinc resistance-associa 23.6 1.5E+02 0.005 27.6 6.4 78 360-469 66-143 (175)
46 2yy0_A C-MYC-binding protein; 22.8 90 0.0031 23.6 3.9 29 431-459 21-49 (53)
47 2xv5_A Lamin-A/C; structural p 20.8 1.3E+02 0.0044 24.3 4.7 28 441-468 3-30 (74)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.62 E-value=5.7e-08 Score=95.63 Aligned_cols=199 Identities=11% Similarity=0.163 Sum_probs=133.6
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCC----CCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENF----PGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLIS 77 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~df----PGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ 77 (522)
++|.||+.++...-.......|.|+++ .-.+++|+.+.+|+|++++.+++.||..|..||.+|+|++ |..
T Consensus 56 a~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~ 129 (279)
T 3i3n_A 56 AATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIR------LKE 129 (279)
T ss_dssp HHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHH------HHH
T ss_pred HcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHH------HHH
Confidence 478999999875322223458899876 4579999999999999999999999999999999999986 999
Q ss_pred HHHHHhhhhhcCChHHHHHHHhhhccccchhhhhc---hHHHHHHHHHHHhccCCcccccccCCCCceehhccccChHHH
Q 009928 78 KTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHF 154 (522)
Q Consensus 78 ktE~fL~~vvl~sW~dsi~vL~sce~llp~aE~l~---iv~RCidsla~ka~~~~~~~~~~~~~~dWW~eDl~~L~~~~f 154 (522)
.++.||.+.+-. .+|-.++.+|+..+ +...|.+-|+..... + +-.++...|+.+..
T Consensus 130 ~c~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~-------v-----~~~~~f~~L~~~~l 188 (279)
T 3i3n_A 130 FCGEFLKKKLHL---------SNCVAIHSLAHMYTLSQLALKAADMIRRNFHK-------V-----IQDEEFYTLPFHLI 188 (279)
T ss_dssp HHHHHHHHHCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHH-------H-----TTSSGGGGSCHHHH
T ss_pred HHHHHHHHcCCc---------chHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH-------H-----hcCcChhcCCHHHH
Confidence 999999885432 24555555666655 567777777643311 1 11256678888777
Q ss_pred HHHHHHHHhcC--CC-chhHHHHHHHHHHhhcCCCCCCccchHhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcCC
Q 009928 155 MRIITTIKVKG--TK-PEIIGKCIMHYAKKWLPGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNA 231 (522)
Q Consensus 155 ~rvi~am~~~g--~~-~~~i~~~l~~Ya~k~l~~~~~~~~~~~~qr~llE~iv~lLP~~k~~vsc~fL~~LLR~A~~l~a 231 (522)
..++.. -. ++ ...|-.+++.|++.- ....+..+..+...+- =..+|..+|..+++..-.+..
T Consensus 189 ~~lL~~---d~L~v~sE~~vf~av~~W~~~~----------~~~r~~~~~~ll~~VR--f~l~~~~~L~~~v~~~~l~~~ 253 (279)
T 3i3n_A 189 RDWLSD---LEITVDSEEVLFETVLKWVQRN----------AEERERYFEELFKLLR--LSQMKPTYLTRHVKPERLVAN 253 (279)
T ss_dssp HHHHTC---SSCCCSCHHHHHHHHHHHHHTT----------HHHHTTTHHHHHTTSC--GGGSCHHHHHHTTTTSHHHHT
T ss_pred HHHhcC---cCCCCCCHHHHHHHHHHHHHcC----------HHHHHHHHHHHHHhcC--CCCCCHHHHHHHhhccchhcC
Confidence 766543 32 33 445666666555521 1122233344433321 145889999999988888889
Q ss_pred CHHHHHHHHHH
Q 009928 232 SPALISELEKR 242 (522)
Q Consensus 232 s~~cr~~LE~r 242 (522)
++.|+.-|..-
T Consensus 254 ~~~c~~~l~ea 264 (279)
T 3i3n_A 254 NEVCVKLVADA 264 (279)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99998877543
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.39 E-value=1.9e-07 Score=90.69 Aligned_cols=198 Identities=13% Similarity=0.195 Sum_probs=116.1
Q ss_pred ccccHHHHHhcCCCC--CCCccceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHH
Q 009928 2 SKCGYIARLELQPSI--SNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (522)
Q Consensus 2 Sksg~l~rl~~~~~~--~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~kt 79 (522)
++|.||+.++..... ......|.|+|++ +++|+.+.+|+|++++++++.||..+..||.+|+|.+ |....
T Consensus 52 a~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~------l~~~c 123 (256)
T 3hve_A 52 AASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLC 123 (256)
T ss_dssp TTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHH------HHHHH
T ss_pred HcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHH------HHHHH
Confidence 579999999875321 1134588998875 8999999999999999999999999999999999996 99999
Q ss_pred HHHhhhhhcCChHHHHHHHhhhccccchhhhhc---hHHHHHHHHHHHhccCCcccccccCCCCceehhccccChHHHHH
Q 009928 80 EAFLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMR 156 (522)
Q Consensus 80 E~fL~~vvl~sW~dsi~vL~sce~llp~aE~l~---iv~RCidsla~ka~~~~~~~~~~~~~~dWW~eDl~~L~~~~f~r 156 (522)
+.||.+.+-. .+|-.++.+|+..+ +...|.+-|+..... + +--++...|+.+....
T Consensus 124 ~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~-------v-----~~~~~f~~L~~~~l~~ 182 (256)
T 3hve_A 124 CEFLEGCIAA---------ENCIGIRDFALHYCLHHVHYLATEYLETHFRD-------V-----SSTEEFLELSPQKLKE 182 (256)
T ss_dssp HHHHHHTCCS---------STTHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-------H-----TTCHHHHSSCHHHHHH
T ss_pred HHHHHhhCCH---------hhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH-------H-----hCCcchhcCCHHHHHH
Confidence 9999886532 23444455565554 556777766543321 0 0125677888888887
Q ss_pred HHHHHHhcCCC-chhHHHHHHHHHHhhcCCCCCCccchHhHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcCCC-HH
Q 009928 157 IITTIKVKGTK-PEIIGKCIMHYAKKWLPGKEEVSVGQKEQRTIIENLVNLLPHQDEGVSCKFFLQMLKMAMVYNAS-PA 234 (522)
Q Consensus 157 vi~am~~~g~~-~~~i~~~l~~Ya~k~l~~~~~~~~~~~~qr~llE~iv~lLP~~k~~vsc~fL~~LLR~A~~l~as-~~ 234 (522)
++..=.- .++ ...|-.+ +.+|+..... .-...-..|++.| ++ ..+|..+|...+..--.+..+ +.
T Consensus 183 lL~~d~L-~v~~E~~v~~a----v~~W~~~~~~--~R~~~~~~ll~~V-Rf-----~~l~~~~l~~~v~~~~l~~~~~~~ 249 (256)
T 3hve_A 183 VISLEKL-NVGNERYVFEA----VIRWIAHDTE--IRKVHMKDVMSAL-WV-----SGLDSSYLREQMLNEPLVREIVKE 249 (256)
T ss_dssp HHHCC--------CTTHHH----HTTTCCC--C--CSTTTHHHHHHHH-HH-----HTTCC-CHHHHHHTSTTHHHHHCC
T ss_pred HHccCCC-CCCCHHHHHHH----HHHHHHcCHH--HHHHHHHHHHHhC-CC-----CCCCHHHHHHHHhcChHHHhhHHH
Confidence 7764111 122 3344333 4567654211 0011224566654 32 123445677776665555555 56
Q ss_pred HHHHHHH
Q 009928 235 LISELEK 241 (522)
Q Consensus 235 cr~~LE~ 241 (522)
|+.-|++
T Consensus 250 c~~ll~~ 256 (256)
T 3hve_A 250 CSNIPLS 256 (256)
T ss_dssp -------
T ss_pred HHHHhhC
Confidence 8776654
No 3
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.29 E-value=8.5e-07 Score=74.88 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=63.3
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE~ 81 (522)
++|.||++++...-.... ..|.|+|++ +++|+...+|+|+.++.+++.|+..|..+|++++|++ |...++.
T Consensus 33 ~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------L~~~c~~ 103 (109)
T 2vkp_A 33 VGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPA------LAKACVN 103 (109)
T ss_dssp HHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 479999999985432213 678888764 8999999999999999999999999999999999996 9999999
Q ss_pred Hhhhh
Q 009928 82 FLTLV 86 (522)
Q Consensus 82 fL~~v 86 (522)
||.+.
T Consensus 104 ~l~~~ 108 (109)
T 2vkp_A 104 FLETS 108 (109)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99763
No 4
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.27 E-value=9.6e-07 Score=76.59 Aligned_cols=72 Identities=18% Similarity=0.288 Sum_probs=64.5
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE~ 81 (522)
++|.||+.++... ...|.|+|++ +++|+.+.+|+|++++.+++.|+..|..||++++|.+ |....+.
T Consensus 49 a~S~yF~~~f~~~-----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~ 115 (121)
T 1buo_A 49 CTSKMFEILFHRN-----SQHYTLDFLS--PKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEY------LEEQCLK 115 (121)
T ss_dssp HHCHHHHHHTTSC-----CSEEEECSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHH------HHHHHHH
T ss_pred hcCHHHHHHHcCC-----CcEEEeCCCC--HHHHHHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHH------HHHHHHH
Confidence 5899999999752 3478898886 8999999999999999999999999999999999986 9999999
Q ss_pred Hhhhh
Q 009928 82 FLTLV 86 (522)
Q Consensus 82 fL~~v 86 (522)
||.+.
T Consensus 116 ~l~~~ 120 (121)
T 1buo_A 116 MLETI 120 (121)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99874
No 5
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.20 E-value=1.4e-06 Score=75.04 Aligned_cols=75 Identities=12% Similarity=0.288 Sum_probs=62.4
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE~ 81 (522)
++|.||+.++...-.......|.|++++ +++|+...+|+|+.++.+++.|+..|..||.+++|.+ |....+.
T Consensus 46 a~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~------L~~~C~~ 117 (120)
T 2if5_A 46 ACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTVSTANVGDILSAARLLEIPA------VSHVCAD 117 (120)
T ss_dssp HHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHH
Confidence 4799999999854322244578888765 8999999999999999999999999999999999996 8888998
Q ss_pred Hhh
Q 009928 82 FLT 84 (522)
Q Consensus 82 fL~ 84 (522)
||+
T Consensus 118 ~L~ 120 (120)
T 2if5_A 118 LLD 120 (120)
T ss_dssp HHC
T ss_pred HhC
Confidence 874
No 6
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.20 E-value=1e-06 Score=76.26 Aligned_cols=73 Identities=21% Similarity=0.218 Sum_probs=62.9
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE~ 81 (522)
++|.||+.++.... ...|.|+|++ +++|+.+.+|+|++++++++.||..|..||++++|.+ |....+.
T Consensus 45 a~S~yF~~~f~~~~----~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~------L~~~C~~ 112 (119)
T 3b84_A 45 CCSHFFQSLYGDGS----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRVPE------AVELCQS 112 (119)
T ss_dssp HHCHHHHHHHTTTT----CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred hcCHHHHHHHCCCC----CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 47999999997643 3478898887 8999999999999999999999999999999999986 8999999
Q ss_pred Hhhhh
Q 009928 82 FLTLV 86 (522)
Q Consensus 82 fL~~v 86 (522)
||.+.
T Consensus 113 ~l~~~ 117 (119)
T 3b84_A 113 FKPKT 117 (119)
T ss_dssp CC---
T ss_pred HHHHc
Confidence 98763
No 7
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.18 E-value=2.7e-06 Score=76.97 Aligned_cols=105 Identities=11% Similarity=0.092 Sum_probs=80.5
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE~ 81 (522)
++|.||++++...-.......|.|+|++ +++|+.+.+|+|+..+.+++.|+..|..+|++++|.+ |...++.
T Consensus 55 ~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 126 (172)
T 3htm_A 55 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 126 (172)
T ss_dssp HHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 5799999999864322234588998875 8999999999999999999999999999999999986 9999999
Q ss_pred HhhhhhcCChHHHHHHHhhhccccchhhhhc---hHHHHHHHHHH
Q 009928 82 FLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAW 123 (522)
Q Consensus 82 fL~~vvl~sW~dsi~vL~sce~llp~aE~l~---iv~RCidsla~ 123 (522)
||.+.+- -. +|-.++.+|+..+ +...|.+-|+.
T Consensus 127 ~l~~~l~--~~-------n~~~~~~~A~~~~~~~L~~~~~~~i~~ 162 (172)
T 3htm_A 127 ALCSNLS--VE-------NAAEILILADLHSADQLKTQAVDFINY 162 (172)
T ss_dssp HHHHTCC--TT-------THHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhCC--HH-------HHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9987442 12 3333444555443 55677776654
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.14 E-value=2.8e-06 Score=72.86 Aligned_cols=72 Identities=18% Similarity=0.346 Sum_probs=61.1
Q ss_pred ccccHHHHHhcCCCCCCCccceEec--CCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLE--NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~--dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~kt 79 (522)
++|.||+.++...+ ...|.|+ |+ .+++|+.+.+|+|+.++.+++.||..|..||++++|.+ |....
T Consensus 43 a~S~yF~~~f~~~~----~~~i~l~~~~~--~~~~f~~ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~------L~~~C 110 (116)
T 2vpk_A 43 SFSEYFGAIYRSTS----ENNVFLDQSQV--KADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEE------VVTKC 110 (116)
T ss_dssp HHCHHHHHHHTTCC----CSCEECCTTTC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHH
T ss_pred hcCHHHHHHHcCCC----CCeEEeecCCC--CHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHH
Confidence 57999999998652 2356665 55 58999999999999999999999999999999999985 89999
Q ss_pred HHHhhh
Q 009928 80 EAFLTL 85 (522)
Q Consensus 80 E~fL~~ 85 (522)
+.||.+
T Consensus 111 ~~~l~~ 116 (116)
T 2vpk_A 111 KIKMED 116 (116)
T ss_dssp HHHHC-
T ss_pred HHHHhC
Confidence 999853
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.09 E-value=4.3e-06 Score=72.76 Aligned_cols=75 Identities=17% Similarity=0.302 Sum_probs=64.9
Q ss_pred ccccHHHHHhcCCCCCCCccceEe-cCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKL-ENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L-~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE 80 (522)
++|.||+.++...... ....|.| +++ .+++|+.+.+|+|+.++.+++.|+..|..||++++|.+ |....+
T Consensus 50 a~S~~F~~~f~~~~~e-~~~~i~l~~~~--~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~ 120 (127)
T 1r29_A 50 ACSGLFYSIFTDQLKR-NLSVINLDPEI--NPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEH------VVDTCR 120 (127)
T ss_dssp HHCHHHHHHHTSTTTT-TCSEEECCTTS--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHH
T ss_pred HhCHHHHHHhcCCccC-CCCEEEeCCCC--CHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 5799999999864332 4457888 666 48999999999999999999999999999999999996 899999
Q ss_pred HHhhh
Q 009928 81 AFLTL 85 (522)
Q Consensus 81 ~fL~~ 85 (522)
.||.+
T Consensus 121 ~~l~~ 125 (127)
T 1r29_A 121 KFIKA 125 (127)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99865
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.07 E-value=3.5e-06 Score=75.69 Aligned_cols=74 Identities=20% Similarity=0.281 Sum_probs=62.4
Q ss_pred ccccHHHHHhcCCCCC--CCccceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHH
Q 009928 2 SKCGYIARLELQPSIS--NLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~--~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~kt 79 (522)
++|.||+.++...... .....|.|+|++ +++|+.+.+|+|.+++.+++.||..|..||.+|+|.+ |...+
T Consensus 68 a~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C 139 (144)
T 2ppi_A 68 AASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLC 139 (144)
T ss_dssp HHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHH------HHHHH
T ss_pred HcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHH
Confidence 4799999999743211 134578998876 9999999999999999999999999999999999986 88888
Q ss_pred HHHh
Q 009928 80 EAFL 83 (522)
Q Consensus 80 E~fL 83 (522)
+.||
T Consensus 140 ~~~L 143 (144)
T 2ppi_A 140 CEFL 143 (144)
T ss_dssp HTTC
T ss_pred HHHh
Confidence 8887
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.06 E-value=1.9e-06 Score=76.39 Aligned_cols=74 Identities=19% Similarity=0.228 Sum_probs=61.8
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE~ 81 (522)
++|.||+.++.... ...|.|+|++ +++|+.+.+|+|..++++++.||..|..||++|+|.+ |....+.
T Consensus 46 a~S~yF~~mf~~~~----~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~ 113 (135)
T 2yy9_A 46 CCSHFFQRIYGDGT----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPE------AVELCQS 113 (135)
T ss_dssp HHCHHHHHTCC--------CCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HhCHHHHHHHcCCC----CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 47899999987532 3478998887 8999999999999999999999999999999999986 8999999
Q ss_pred Hhhhhh
Q 009928 82 FLTLVI 87 (522)
Q Consensus 82 fL~~vv 87 (522)
||.+..
T Consensus 114 ~l~~~l 119 (135)
T 2yy9_A 114 FQPQTS 119 (135)
T ss_dssp CCC---
T ss_pred HHHHhc
Confidence 987744
No 12
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=98.03 E-value=7.3e-06 Score=72.68 Aligned_cols=76 Identities=16% Similarity=0.292 Sum_probs=64.9
Q ss_pred ccccHHHHHhcCCCCCCCccceEec-CCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~-dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE 80 (522)
++|.||+.++..... +...|.|. +++ +++|+.+.+|+|+.++.+++.||..|..||++|+|.+ |....+
T Consensus 57 a~S~yF~~~f~~~~~--e~~~i~l~~~v~--~~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~------L~~~C~ 126 (138)
T 2z8h_A 57 ACSSYFHSRIVGQTD--AELTVTLPEEVT--VKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHN------IEESCF 126 (138)
T ss_dssp HHCHHHHHHHTTCCC--TTEEEECCTTSC--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGG------GHHHHH
T ss_pred HcCHHHHHHHhcCCC--CCceEEeCCCCC--HHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 579999999986432 23467774 554 8999999999999999999999999999999999996 999999
Q ss_pred HHhhhhh
Q 009928 81 AFLTLVI 87 (522)
Q Consensus 81 ~fL~~vv 87 (522)
.||.+.+
T Consensus 127 ~~l~~~l 133 (138)
T 2z8h_A 127 QFLKFKF 133 (138)
T ss_dssp HHTTCCC
T ss_pred HHHHHhc
Confidence 9998754
No 13
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.02 E-value=1.5e-06 Score=76.56 Aligned_cols=94 Identities=11% Similarity=0.074 Sum_probs=62.7
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE~ 81 (522)
++|.||+.++...........|.|+|++ +++|+.+.+|+|+.++++++.|+..+..+|++++|.+ |...++.
T Consensus 46 ~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 117 (145)
T 4eoz_A 46 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 117 (145)
T ss_dssp HHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHC
T ss_pred HcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHH------HHHHHHH
Confidence 5799999999864321133578898875 8999999999999999999999999999999999986 8999999
Q ss_pred HhhhhhcCChHHHHHHHhhhccccchhhhhc
Q 009928 82 FLTLVILSSWKETITVLKSCKNLSPWAENLQ 112 (522)
Q Consensus 82 fL~~vvl~sW~dsi~vL~sce~llp~aE~l~ 112 (522)
||.+.+- ..+|-.++.+|+..+
T Consensus 118 ~l~~~l~---------~~n~~~~l~~A~~~~ 139 (145)
T 4eoz_A 118 ALCSNLS---------VENAAEILILADLHS 139 (145)
T ss_dssp C------------------------------
T ss_pred HHHHhCC---------HHHHHHHHHHHHHhC
Confidence 9986431 235555666666554
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.02 E-value=3.1e-06 Score=73.25 Aligned_cols=70 Identities=19% Similarity=0.362 Sum_probs=60.7
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE~ 81 (522)
++|.||+.++... ...|.|+++ .+++|+.+.+|+|++++++++.|+..|..+|++|+|.+ |....+.
T Consensus 48 a~S~yF~~~f~~~-----~~~i~l~~~--~~~~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~------L~~~C~~ 114 (119)
T 2q81_A 48 ACSEYFKMLFVDQ-----KDVVHLDIS--NAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQD------IITACHA 114 (119)
T ss_dssp HHCHHHHHHHHHC-----CSGGGGGGC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHHcCC-----CCEEEeCCC--CHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHH
Confidence 5799999999852 235667665 48999999999999999999999999999999999996 8888999
Q ss_pred Hhh
Q 009928 82 FLT 84 (522)
Q Consensus 82 fL~ 84 (522)
||.
T Consensus 115 ~l~ 117 (119)
T 2q81_A 115 LKS 117 (119)
T ss_dssp HHT
T ss_pred HHh
Confidence 885
No 15
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.02 E-value=1.8e-06 Score=75.63 Aligned_cols=73 Identities=23% Similarity=0.405 Sum_probs=56.6
Q ss_pred ccccHHHHHhcCCCCCCCccceEec-CCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~-dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE 80 (522)
++|.||+.++... ....|.|+ +++ +++|+.+.+|+|..++++++.||..|..||.+|+|.+ |...++
T Consensus 54 a~S~~F~~~f~~~----~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~------l~~~C~ 121 (129)
T 3ga1_A 54 ASSSYFRDLFNNS----RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQE------IMEKGT 121 (129)
T ss_dssp HHBHHHHHHHHHC----CCSEEECCTTCC--HHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTT------SSCC--
T ss_pred HcCHHHHHHHcCC----CCCEEEECCCCC--HHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 4799999999864 23478885 665 8999999999999999999999999999999999997 666788
Q ss_pred HHhhhh
Q 009928 81 AFLTLV 86 (522)
Q Consensus 81 ~fL~~v 86 (522)
.||.++
T Consensus 122 ~~L~~~ 127 (129)
T 3ga1_A 122 EFFLKV 127 (129)
T ss_dssp ------
T ss_pred HHHHHh
Confidence 888763
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=97.91 E-value=4.2e-06 Score=72.64 Aligned_cols=63 Identities=19% Similarity=0.286 Sum_probs=54.2
Q ss_pred ccccHHHHHhcCCCCCCCccceEecC-CCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcc
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLEN-FPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSE 68 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~d-fPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE 68 (522)
++|.||+.++..... +...|.|++ + .+++|+.+.+|+|.+++.+++.||..|..||++|+|.+
T Consensus 53 a~S~yF~~~f~~~~~--e~~~i~l~~~~--~~~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~ 116 (125)
T 3ohu_A 53 ACSEYFWQALVGQTK--NDLVVSLPEEV--TARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHN 116 (125)
T ss_dssp HHBHHHHHHHTTCCC--SSCEEECCTTC--CHHHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSS
T ss_pred HcCHHHHHHhcCCCC--CCcEEEeCCCC--CHHHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHH
Confidence 479999999986442 245677766 5 49999999999999999999999999999999999986
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.73 E-value=1.1e-05 Score=70.25 Aligned_cols=72 Identities=17% Similarity=0.285 Sum_probs=58.0
Q ss_pred ccccHHHHHhcCCCCCCCccceEec-CCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~-dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE 80 (522)
++|.||+.++..... +...|.|+ ++ .+++|+.+.+|+|++++++++.||..|..||++++|.+ |....+
T Consensus 50 a~S~yF~~mf~~~~~--e~~~i~l~~~v--~~~~f~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~------L~~~C~ 119 (124)
T 2ihc_A 50 ACSSYFHSRIVGQAD--GELNITLPEEV--TVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHN------IEESCF 119 (124)
T ss_dssp HHBHHHHHHHTTC-----CEEEECCTTS--CHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSS------CCGGGG
T ss_pred HcCHHHHHHHcCCCC--CCceEeecCCc--CHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHH------HHHHHH
Confidence 579999999986432 23467773 55 48999999999999999999999999999999999996 555566
Q ss_pred HHh
Q 009928 81 AFL 83 (522)
Q Consensus 81 ~fL 83 (522)
.||
T Consensus 120 ~~l 122 (124)
T 2ihc_A 120 QFL 122 (124)
T ss_dssp GTC
T ss_pred HHH
Confidence 665
No 18
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.67 E-value=3.5e-05 Score=66.58 Aligned_cols=60 Identities=20% Similarity=0.283 Sum_probs=53.5
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCcc-ccCcchhhHHHhhHHhhcCcc
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPI-AFNPNNIAPLRCASEFLDMSE 68 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i-~it~~NVa~LrCAAeyLeMtE 68 (522)
++|.||+.++... ...|.|++++ +++|+.+.+|+|++++ ++++.|+..|..||++|+|..
T Consensus 52 a~S~~F~~~f~~~-----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 52 ASSTYFHQLFSVA-----GQVVELSFIR--AEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp HHCHHHHHHTTSC-----CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHH
T ss_pred HcCHHHHHHHcCC-----CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccc
Confidence 5799999999763 3478898876 8999999999999999 799999999999999999974
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.66 E-value=2.8e-05 Score=67.86 Aligned_cols=57 Identities=23% Similarity=0.273 Sum_probs=50.3
Q ss_pred cceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHHHHhhh
Q 009928 21 YDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTL 85 (522)
Q Consensus 21 ~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE~fL~~ 85 (522)
..|.|+|++ +++|+...+|+|.++++|+..||..|..||++|+|.+ |....+.++.+
T Consensus 61 ~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 61 QWALGEGIS--PSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp EEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHHHHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred CEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 468888876 8999999999999999999999999999999999986 88888887754
No 20
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.63 E-value=5.7e-05 Score=75.11 Aligned_cols=106 Identities=12% Similarity=0.106 Sum_probs=81.7
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCccccCcchhhHHHhhHHhhcCcccccCCchHHHHHH
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~it~~NVa~LrCAAeyLeMtE~~~~gNL~~ktE~ 81 (522)
++|.||+.++...-......+|.|+|++ +++|+...+|+|+..+.++..|+..|..||++++|.. |...+|.
T Consensus 195 a~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 266 (312)
T 3hqi_A 195 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 266 (312)
T ss_dssp HHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHH------HHHHHHH
Confidence 5799999999754322245689999875 8999999999999999999999999999999999985 9999999
Q ss_pred HhhhhhcCChHHHHHHHhhhccccchhhhh---chHHHHHHHHHHH
Q 009928 82 FLTLVILSSWKETITVLKSCKNLSPWAENL---QIVRRCCDSIAWK 124 (522)
Q Consensus 82 fL~~vvl~sW~dsi~vL~sce~llp~aE~l---~iv~RCidsla~k 124 (522)
||.+.+-. .+|-.++.+|+.. .+...|++-|+..
T Consensus 267 ~l~~~~~~---------~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 303 (312)
T 3hqi_A 267 ALCSNLSV---------ENAAEILILADLHSADQLKTQAVDFINYH 303 (312)
T ss_dssp HHHTTCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHccCCH---------HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99764321 2444455566655 3677888887753
No 21
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=96.19 E-value=0.0071 Score=50.97 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=47.7
Q ss_pred ccccHHHHHhcCCCCC--CCccceEecCCCCChHHHHHHHHhhc-----C---Cccc---cCcchhhHHHhhHHhhc
Q 009928 2 SKCGYIARLELQPSIS--NLGYDLKLENFPGGSETFEIILKFCY-----G---LPIA---FNPNNIAPLRCASEFLD 65 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~--~~~~~i~L~dfPGGaeaFEl~akFCY-----G---~~i~---it~~NVa~LrCAAeyLe 65 (522)
..|++|+.++....+. .....|.|++++ +.+++++..||| . ..+. |++.|+--|-.||.||+
T Consensus 22 ~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i~~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 22 LTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLD 96 (97)
T ss_dssp TTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCCCGGGHHHHHHHHHHHT
T ss_pred HHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcCCHHHHHHHHHHHhhhC
Confidence 4699999999864321 124478888765 789999999999 3 4555 99999999999999997
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=95.95 E-value=0.0048 Score=56.44 Aligned_cols=79 Identities=14% Similarity=0.181 Sum_probs=62.3
Q ss_pred ccccHHHHHhcCCC-C-CCCccceEecCCCCChHHHHHHHHhhcCCc--------------------------cccCcch
Q 009928 2 SKCGYIARLELQPS-I-SNLGYDLKLENFPGGSETFEIILKFCYGLP--------------------------IAFNPNN 53 (522)
Q Consensus 2 Sksg~l~rl~~~~~-~-~~~~~~i~L~dfPGGaeaFEl~akFCYG~~--------------------------i~it~~N 53 (522)
+.|++|+.++.... . ......|.|++++ +.+++.+..|||-.+ +.++..|
T Consensus 21 ~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~~~ 98 (159)
T 2ast_A 21 KQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGT 98 (159)
T ss_dssp HTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCHHH
T ss_pred HHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCHHH
Confidence 46999999998632 1 1123478888876 579999999999755 7899999
Q ss_pred hhHHHhhHHhhcCcccccCCchHHHHHHHhhhhhc
Q 009928 54 IAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVIL 88 (522)
Q Consensus 54 Va~LrCAAeyLeMtE~~~~gNL~~ktE~fL~~vvl 88 (522)
+--|--||.||+|.. |+.-+-.|+...+-
T Consensus 99 l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 99 LFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp HHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 999999999999986 89899999877553
No 23
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=92.30 E-value=0.044 Score=50.25 Aligned_cols=75 Identities=15% Similarity=0.267 Sum_probs=41.5
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCc---------------------------cccCcchh
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP---------------------------IAFNPNNI 54 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~---------------------------i~it~~NV 54 (522)
..|++|+.++.... ....|.|++++| .+++.+..|||--. +.++..++
T Consensus 24 ~~S~~ik~ml~~~~---~~~~Ipl~~V~~--~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l 98 (160)
T 2p1m_A 24 LESQTIAHMVEDDC---VDNGVPLPNVTS--KILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATL 98 (160)
T ss_dssp HTCTTTC---------------CCTTSCH--HHHHHHHHC----------------------------------------
T ss_pred HHhHHHHHHHHccC---CCCceeCCcCcH--HHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCHHHH
Confidence 46889999987642 223677888776 79999999999743 57899999
Q ss_pred hHHHhhHHhhcCcccccCCchHHHHHHHhhhhh
Q 009928 55 APLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 87 (522)
Q Consensus 55 a~LrCAAeyLeMtE~~~~gNL~~ktE~fL~~vv 87 (522)
--|--||.||+|.. |+.-+-.|+...+
T Consensus 99 ~eLi~AAnyL~I~~------Lldl~c~~vA~~i 125 (160)
T 2p1m_A 99 FELILAANYLNIKN------LLDLTCQTVADMI 125 (160)
T ss_dssp --CHHHHHHTTCHH------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 99999999999985 8888988887755
No 24
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=92.06 E-value=0.13 Score=46.05 Aligned_cols=74 Identities=15% Similarity=0.218 Sum_probs=60.4
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCCc--------------------------cccCcchhh
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP--------------------------IAFNPNNIA 55 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~--------------------------i~it~~NVa 55 (522)
..|++|+.++.... ...|.|++++ +.+++.+..|||--. +.++..++-
T Consensus 22 ~~S~~ik~ml~~~~----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~~~l~ 95 (141)
T 1fs1_B 22 KQSVTIKTMLEDLG----MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLF 95 (141)
T ss_dssp GTCHHHHHHHHHTC----CSSEECTTCC--HHHHHHHHHHHHHHTTCC-----------------HHHHHHTCSCHHHHH
T ss_pred HHhHHHHHHHHhcC----CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCHHHHH
Confidence 57999999998642 2368888886 579999999999532 778999999
Q ss_pred HHHhhHHhhcCcccccCCchHHHHHHHhhhhh
Q 009928 56 PLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 87 (522)
Q Consensus 56 ~LrCAAeyLeMtE~~~~gNL~~ktE~fL~~vv 87 (522)
-|--||.||++.. |+.-+-.|+...+
T Consensus 96 eLi~AAnyL~I~~------Lldl~c~~vA~~i 121 (141)
T 1fs1_B 96 ELILAANYLDIKG------LLDVTCKTVANMI 121 (141)
T ss_dssp HHHHHHHHHTCHH------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhH------HHHHHHHHHHHHH
Confidence 9999999999985 8888888887644
No 25
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=84.47 E-value=1.6 Score=33.45 Aligned_cols=34 Identities=24% Similarity=0.378 Sum_probs=30.5
Q ss_pred hHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009928 435 SIEIKNLREELENVKTRMAELQKDYSELQREYEK 468 (522)
Q Consensus 435 ~~E~~~lk~el~~mr~rv~eLe~~c~~m~~~~~k 468 (522)
.-|.+.||.|++.+|.++.+|.+++..++.++++
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4588999999999999999999999999988764
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=82.15 E-value=1.7 Score=40.12 Aligned_cols=77 Identities=6% Similarity=0.103 Sum_probs=53.8
Q ss_pred ccccHHHHHhcCCCCC----CCccceEecCCCCChHHHHHHHHhhcCCc-------------------------cccCcc
Q 009928 2 SKCGYIARLELQPSIS----NLGYDLKLENFPGGSETFEIILKFCYGLP-------------------------IAFNPN 52 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~----~~~~~i~L~dfPGGaeaFEl~akFCYG~~-------------------------i~it~~ 52 (522)
..|+.|+.++...... .....|-|++++ +.+++.+..|||--+ +.+.+.
T Consensus 27 ~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~ 104 (169)
T 3v7d_A 27 ERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQE 104 (169)
T ss_dssp TTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCHH
T ss_pred HHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCHH
Confidence 4699999999865431 122578888876 589999999998521 356677
Q ss_pred hhhHHHhhHHhhcCcccccCCchHHHHHHHhhhh
Q 009928 53 NIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLV 86 (522)
Q Consensus 53 NVa~LrCAAeyLeMtE~~~~gNL~~ktE~fL~~v 86 (522)
..--|-.||.||+|.. |+.-+=.++...
T Consensus 105 ~LfeLi~AAnyLdIk~------Lldl~c~~vA~~ 132 (169)
T 3v7d_A 105 MLYEIILAANYLNIKP------LLDAGCKVVAEM 132 (169)
T ss_dssp HHHHHHHHHHHTTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHH------HHHHHHHHHHHH
Confidence 7788899999999985 666666655443
No 27
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=81.22 E-value=2.7 Score=31.67 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=31.1
Q ss_pred HhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009928 436 IEIKNLREELENVKTRMAELQKDYSELQREYEKLSN 471 (522)
Q Consensus 436 ~E~~~lk~el~~mr~rv~eLe~~c~~m~~~~~k~~~ 471 (522)
+.+-.||.--..+=+||.+||..|..+.||++++.+
T Consensus 4 q~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 4 RQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 345678888888999999999999999999999864
No 28
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=80.44 E-value=0.98 Score=37.88 Aligned_cols=63 Identities=17% Similarity=0.254 Sum_probs=45.9
Q ss_pred ccccHHHHHhcCCCC-C-CCccceEecCCCCChHHHHHHHHhhcCC-----------ccccCcchhhHHHhhHHhhcC
Q 009928 2 SKCGYIARLELQPSI-S-NLGYDLKLENFPGGSETFEIILKFCYGL-----------PIAFNPNNIAPLRCASEFLDM 66 (522)
Q Consensus 2 Sksg~l~rl~~~~~~-~-~~~~~i~L~dfPGGaeaFEl~akFCYG~-----------~i~it~~NVa~LrCAAeyLeM 66 (522)
..|++|+.++..... . .....|-|++++| .+++.+..|||-- .+.+.+..+--|--||.||++
T Consensus 21 ~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~--~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 21 LTSGTIKAMLSGPGQFAENETNEVNFREIPS--HVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp TTSHHHHHHHHCC--------CEEECSSCCH--HHHHHHHHHHHHHHHHHSCCSCCCCCCCCTTTHHHHHHHHHHHTC
T ss_pred HHhHHHHHHHHccCCcccccCCceeCCCCCH--HHHHHHHHHHHHccccCCCcccCCCcccCHHHHHHHHHHHHHhCc
Confidence 469999999986432 1 1234688887764 6999999999842 146888888899999999974
No 29
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=74.72 E-value=1.7 Score=36.60 Aligned_cols=62 Identities=11% Similarity=0.115 Sum_probs=46.2
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHHhhcCC--------------ccccCcchhhHHHhhHHhhcC
Q 009928 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGL--------------PIAFNPNNIAPLRCASEFLDM 66 (522)
Q Consensus 2 Sksg~l~rl~~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~--------------~i~it~~NVa~LrCAAeyLeM 66 (522)
..|+.|+.++...- ......|-|++++| .+++.+..|||-- .+.+.+..+--|--||.||++
T Consensus 24 ~~S~~ik~ml~~~~-e~~~~~Iplp~V~~--~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 24 MISPTLKAMIEGPF-RESKGRIELKQFDS--HILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp TTCHHHHHHHHSST-TTCTTEEEETTSCH--HHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred HHhHHHHHHHhccc-ccCCCceecCCcCH--HHHHHHHHHHHHhcccCCCccccccCCCccCCHHHHHHHHHHHHHhCc
Confidence 46899999998622 11234788888765 6999999999842 145777778888889999974
No 30
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=74.56 E-value=5.7 Score=30.19 Aligned_cols=38 Identities=26% Similarity=0.471 Sum_probs=33.6
Q ss_pred cchHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009928 433 STSIEIKNLREELENVKTRMAELQKDYSELQREYEKLS 470 (522)
Q Consensus 433 ~~~~E~~~lk~el~~mr~rv~eLe~~c~~m~~~~~k~~ 470 (522)
.++.||-.||.|++.=...++.||.|-+.||.-+..+.
T Consensus 14 ~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~lq 51 (54)
T 1deb_A 14 ALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQ 51 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHHc
Confidence 46789999999999999999999999999998776554
No 31
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=71.18 E-value=5.9 Score=30.63 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=28.0
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009928 438 IKNLREELENVKTRMAELQKDYSELQREYEKLSN 471 (522)
Q Consensus 438 ~~~lk~el~~mr~rv~eLe~~c~~m~~~~~k~~~ 471 (522)
...||.--..+=.+|.+||-.|..|.||++++.+
T Consensus 13 ~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 13 LLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456665667778999999999999999999875
No 32
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=64.10 E-value=2.9 Score=36.17 Aligned_cols=63 Identities=17% Similarity=0.254 Sum_probs=45.1
Q ss_pred ccccHHHHHhcCCCC-C-CCccceEecCCCCChHHHHHHHHhhcCC-----------ccccCcchhhHHHhhHHhhcC
Q 009928 2 SKCGYIARLELQPSI-S-NLGYDLKLENFPGGSETFEIILKFCYGL-----------PIAFNPNNIAPLRCASEFLDM 66 (522)
Q Consensus 2 Sksg~l~rl~~~~~~-~-~~~~~i~L~dfPGGaeaFEl~akFCYG~-----------~i~it~~NVa~LrCAAeyLeM 66 (522)
..|+.|+.++..... . .....|-|++++| .+++.+..|||=- .+.+.+..+--|--||.||++
T Consensus 37 ~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s--~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 37 LTSGTIKAMLSGPGQFAENETNEVNFREIPS--HVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp HTSHHHHHHSSCC--------CEEECSSCCH--HHHHHHHHHHHHHHHHSSCSSCCCCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHhHHHHHHHHhcCCcccccCCceeCCCCCH--HHHHHHHHHHHHhhhccCCcCCCCCcccCHHHHHHHHHHHHHhCc
Confidence 368999999986432 1 1224688887765 6999999999731 146777888889999999975
No 33
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=64.07 E-value=7.4 Score=33.03 Aligned_cols=27 Identities=15% Similarity=0.353 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009928 442 REELENVKTRMAELQKDYSELQREYEK 468 (522)
Q Consensus 442 k~el~~mr~rv~eLe~~c~~m~~~~~k 468 (522)
=.||+.||..|.|||..+..||+.++.
T Consensus 49 i~Emq~Ir~tvyeLE~~h~kmKq~YEe 75 (92)
T 3vp9_A 49 LAEMQQIRNTVYERELTHRKMKDAYEE 75 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356999999999999999999987764
No 34
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=52.87 E-value=9.9 Score=32.87 Aligned_cols=41 Identities=5% Similarity=-0.066 Sum_probs=30.4
Q ss_pred hhhhhhhhhhhhcCCCCCChhHHHHHHHhcCCcccccchhhHHHHHHHHhhCCC
Q 009928 308 VSKILDNYLAEVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKSHPS 361 (522)
Q Consensus 308 VakLvD~YLaEiA~D~nL~~skF~~LAe~lP~~AR~~~DgLYRAIDiYLKaHp~ 361 (522)
+.+..=.| |...|.+.+|.++.+.+ .++++|||-||-+||.
T Consensus 82 ~vkwt~~y--e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 82 HVVWTFHF--EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EEEEEEEE--EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EEEEEEEE--EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 34444455 67788889998887655 6889999999999983
No 35
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=41.26 E-value=27 Score=28.57 Aligned_cols=32 Identities=16% Similarity=0.340 Sum_probs=26.6
Q ss_pred chHhHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009928 434 TSIEIKNLREELENVKTRMAELQKDYSELQRE 465 (522)
Q Consensus 434 ~~~E~~~lk~el~~mr~rv~eLe~~c~~m~~~ 465 (522)
.++|.+.||..|..+-.|+.+||.|+.-+|+-
T Consensus 13 VREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~ 44 (78)
T 1dip_A 13 VREEVEILKEQIRELVEKNSQLERENTLLKTL 44 (78)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46678889999999999999999999887754
No 36
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=33.61 E-value=14 Score=24.40 Aligned_cols=17 Identities=35% Similarity=0.423 Sum_probs=14.3
Q ss_pred chhhHHHhhHHhhcCcc
Q 009928 52 NNIAPLRCASEFLDMSE 68 (522)
Q Consensus 52 ~NVa~LrCAAeyLeMtE 68 (522)
.||..|-=||||||=-|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 48999999999998544
No 37
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=32.01 E-value=68 Score=27.00 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=27.2
Q ss_pred cchHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009928 433 STSIEIKNLREELENVKTRMAELQKDYSELQREYEKL 469 (522)
Q Consensus 433 ~~~~E~~~lk~el~~mr~rv~eLe~~c~~m~~~~~k~ 469 (522)
.+..|+..|+.+++.|+....++.++-..|++.++.+
T Consensus 52 ~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 52 HLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445677777778888887888888877777777665
No 38
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=31.80 E-value=1e+02 Score=20.80 Aligned_cols=28 Identities=29% Similarity=0.526 Sum_probs=14.0
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009928 437 EIKNLREELENVKTRMAELQKDYSELQR 464 (522)
Q Consensus 437 E~~~lk~el~~mr~rv~eLe~~c~~m~~ 464 (522)
|+..||.|+..++..+.-|.-+.-.++|
T Consensus 3 eiaalkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4455555555555555544444444443
No 39
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=31.71 E-value=62 Score=28.44 Aligned_cols=18 Identities=44% Similarity=0.545 Sum_probs=12.0
Q ss_pred cchHhHhhHHHHHHHHHH
Q 009928 433 STSIEIKNLREELENVKT 450 (522)
Q Consensus 433 ~~~~E~~~lk~el~~mr~ 450 (522)
.+.+|++.||.|+++++.
T Consensus 19 ~Lkreie~lk~ele~l~~ 36 (120)
T 3i00_A 19 RLYREISGLKAQLENMKT 36 (120)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 457777777777665543
No 40
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=30.47 E-value=79 Score=24.47 Aligned_cols=29 Identities=31% Similarity=0.362 Sum_probs=14.5
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009928 437 EIKNLREELENVKTRMAELQKDYSELQRE 465 (522)
Q Consensus 437 E~~~lk~el~~mr~rv~eLe~~c~~m~~~ 465 (522)
+.+.|+.+-..++.++..|++|...+++-
T Consensus 31 ~~~~L~~~N~~L~~~i~~L~~E~~~Lk~l 59 (63)
T 1ci6_A 31 ECKELEKKNEALKERADSLAKEIQYLKDL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555555555544443
No 41
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=27.82 E-value=46 Score=26.12 Aligned_cols=27 Identities=22% Similarity=0.380 Sum_probs=19.4
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 009928 437 EIKNLREELENVKTRMAELQKDYSELQ 463 (522)
Q Consensus 437 E~~~lk~el~~mr~rv~eLe~~c~~m~ 463 (522)
-|..|-.|+..|+.++..||.|-..++
T Consensus 35 VN~~ls~Elr~mQ~~lq~LQsen~~Lr 61 (63)
T 2w6a_A 35 VNSSLSDELRKLQREIHKLQAENLQLR 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHhhhHHHHHHHHHHHHHHhhhhhhc
Confidence 356677777788888888877776655
No 42
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=26.56 E-value=82 Score=23.35 Aligned_cols=22 Identities=27% Similarity=0.555 Sum_probs=11.8
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHH
Q 009928 445 LENVKTR-MAELQKDYSELQREY 466 (522)
Q Consensus 445 l~~mr~r-v~eLe~~c~~m~~~~ 466 (522)
|+++|.. +.|+-+|...||++|
T Consensus 9 le~~KqEIL~E~RkElqK~K~EI 31 (45)
T 1use_A 9 LQRVKQELLEEVKKELQKVKEEI 31 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444333 455666666666665
No 43
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=26.36 E-value=26 Score=28.83 Aligned_cols=42 Identities=10% Similarity=0.191 Sum_probs=32.6
Q ss_pred cccchhHHHHHHHHHHhhhhhhhhhhccchhhhhhhhhhhhhhhh
Q 009928 275 TMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEV 319 (522)
Q Consensus 275 tlyDVd~V~Riv~~Fl~~~~~~~~~~~~~~l~kVakLvD~YLaEi 319 (522)
..++.+++.||+..+...+... -+..++.-+++++|-|..|.
T Consensus 7 ~~~~~~lI~ril~~~f~~~ktr---I~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 7 GGFRKETVERLLRLHFRDGRTR---VNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp CCCCHHHHHHHHHHHCCSTTCE---ECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhccCccc---ccHHHHHHHHHHHHHHHHHH
Confidence 5689999999999866543321 23568889999999999885
No 44
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=24.23 E-value=1e+02 Score=24.63 Aligned_cols=33 Identities=15% Similarity=0.308 Sum_probs=24.6
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009928 437 EIKNLREELENVKTRMAELQKDYSELQREYEKL 469 (522)
Q Consensus 437 E~~~lk~el~~mr~rv~eLe~~c~~m~~~~~k~ 469 (522)
=+..|+.+.+.|+..+.+|.++...+++++..+
T Consensus 48 YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L 80 (83)
T 1nkp_B 48 YIQYMRRKNHTHQQDIDDLKRQNALLEQQVRAL 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 366777777777777888888777777777665
No 45
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=23.61 E-value=1.5e+02 Score=27.62 Aligned_cols=78 Identities=14% Similarity=0.244 Sum_probs=44.3
Q ss_pred CCCCHHhhhhhhcccccCCCCHHHhHHHHhCCCCCchhHHHHHHHHhhhhhhhcccCCCCccCCCCCCCCCCCcchHhHh
Q 009928 360 PSLSEHDRRRLCKLMNCEKLSLDACTHAAQNDRLPLRTVVQVLFSEQVKMRTAMQETEPALQCDNSEQGDTQPSTSIEIK 439 (522)
Q Consensus 360 p~lse~Er~~lCr~mdc~KLS~EAc~HAaQNeRLPlr~vVQvLf~eQ~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 439 (522)
-+||++.+.++ .+-....+.+.-|+| |-+...+.+|+..+....+. ...++
T Consensus 66 LnLT~EQq~ql-----------~~I~~e~r~~~~~Lr---~ql~akr~EL~aL~~a~~~D---------------eakI~ 116 (175)
T 3lay_A 66 SPLTTEQQATA-----------QKIYDDYYTQTSALR---QQLISKRYEYNALLTASSPD---------------TAKIN 116 (175)
T ss_dssp --CCHHHHHHH-----------HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHTSSSCC---------------HHHHH
T ss_pred ccCCHHHHHHH-----------HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhCCCCC---------------HHHHH
Confidence 47999999987 344445555555655 33444455566655433221 33456
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009928 440 NLREELENVKTRMAELQKDYSELQREYEKL 469 (522)
Q Consensus 440 ~lk~el~~mr~rv~eLe~~c~~m~~~~~k~ 469 (522)
+|-.|+..+|.+ |+.+-..++.+|.|-
T Consensus 117 aL~~Ei~~Lr~q---L~~~R~k~~~em~Ke 143 (175)
T 3lay_A 117 AVAKEMESLGQK---LDEQRVKRDVAMAQA 143 (175)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHh
Confidence 666666666654 444556677777654
No 46
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=22.80 E-value=90 Score=23.57 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=22.3
Q ss_pred CCcchHhHhhHHHHHHHHHHHHHHHHHHH
Q 009928 431 QPSTSIEIKNLREELENVKTRMAELQKDY 459 (522)
Q Consensus 431 ~~~~~~E~~~lk~el~~mr~rv~eLe~~c 459 (522)
...+++||.+||..++.++.++.||....
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888888888888888887653
No 47
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=20.79 E-value=1.3e+02 Score=24.26 Aligned_cols=28 Identities=14% Similarity=0.323 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 009928 441 LREELENVKTRMAELQKDYSELQREYEK 468 (522)
Q Consensus 441 lk~el~~mr~rv~eLe~~c~~m~~~~~k 468 (522)
|..|.+..+..+.+||.+...++++|+.
T Consensus 3 l~~e~~~~~~~i~~lE~eL~~~r~e~~~ 30 (74)
T 2xv5_A 3 SARERDTSRRLLAEKEREMAEMRARMQQ 30 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556777777777777777777666654
Done!