Query 009935
Match_columns 522
No_of_seqs 297 out of 1981
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 19:05:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009935.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009935hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 1E-119 3E-124 965.2 41.5 500 17-516 11-510 (511)
2 PLN02854 3-ketoacyl-CoA syntha 100.0 5E-117 1E-121 947.3 48.0 497 16-513 17-520 (521)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 8E-115 2E-119 930.8 46.3 496 15-511 5-500 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 1E-107 2E-112 871.3 41.8 469 42-511 2-476 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 7.4E-99 2E-103 794.6 39.8 431 81-511 33-465 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 1.6E-77 3.5E-82 596.0 25.5 290 100-389 1-290 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 5.7E-55 1.2E-59 444.9 22.8 321 106-488 2-323 (323)
8 PLN03172 chalcone synthase fam 100.0 1.3E-50 2.7E-55 427.6 31.8 348 106-488 15-387 (393)
9 cd00831 CHS_like Chalcone and 100.0 7.8E-51 1.7E-55 425.7 30.0 344 108-485 2-361 (361)
10 PLN03168 chalcone synthase; Pr 100.0 8.3E-50 1.8E-54 421.3 31.5 350 106-491 14-389 (389)
11 PLN03169 chalcone synthase fam 100.0 1.1E-49 2.3E-54 421.0 30.7 354 101-488 15-389 (391)
12 PLN03173 chalcone synthase; Pr 100.0 2.3E-49 5E-54 417.7 30.8 351 106-490 15-389 (391)
13 PLN03171 chalcone synthase-lik 100.0 3.4E-48 7.4E-53 410.4 30.9 350 105-490 20-397 (399)
14 PLN03170 chalcone synthase; Pr 100.0 2.2E-48 4.9E-53 411.7 29.3 351 106-490 19-393 (401)
15 COG3424 BcsA Predicted naringe 100.0 1E-47 2.2E-52 377.7 25.0 345 108-489 2-354 (356)
16 PRK05963 3-oxoacyl-(acyl carri 100.0 3.6E-47 7.9E-52 392.4 29.0 323 106-487 2-326 (326)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 3.8E-46 8.3E-51 389.2 29.1 335 104-491 4-342 (353)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 1.1E-45 2.3E-50 389.6 28.9 330 106-487 46-379 (379)
19 PRK07204 3-oxoacyl-(acyl carri 100.0 9.6E-45 2.1E-49 374.8 29.9 325 106-487 3-329 (329)
20 PRK12879 3-oxoacyl-(acyl carri 100.0 1.9E-44 4.1E-49 371.5 30.0 321 106-487 3-324 (325)
21 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 7.2E-45 1.6E-49 375.7 26.6 323 107-487 2-325 (326)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 1.8E-44 3.9E-49 374.0 28.2 320 105-487 3-338 (338)
23 PRK06840 hypothetical protein; 100.0 2.5E-43 5.4E-48 365.9 29.8 328 105-488 2-336 (339)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 3.9E-43 8.5E-48 360.2 28.5 319 107-485 1-320 (320)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 7.4E-43 1.6E-47 358.8 28.6 316 107-487 2-318 (318)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 2.6E-41 5.7E-46 347.2 29.5 316 107-488 3-319 (319)
27 PRK04262 hypothetical protein; 100.0 1E-41 2.3E-46 355.2 26.1 310 107-492 2-313 (347)
28 PRK06816 3-oxoacyl-(acyl carri 100.0 7.5E-41 1.6E-45 352.6 31.5 346 107-488 2-378 (378)
29 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 3.8E-41 8.1E-46 350.8 23.4 320 108-505 2-322 (345)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 1.8E-39 3.9E-44 341.4 29.1 346 107-487 2-371 (372)
31 cd00827 init_cond_enzymes "ini 100.0 9.1E-39 2E-43 328.5 23.6 321 107-485 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 5.7E-35 1.2E-39 307.9 28.5 307 108-489 1-319 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 3.1E-33 6.8E-38 298.5 25.4 311 104-489 1-372 (459)
34 PF00195 Chal_sti_synt_N: Chal 100.0 1.6E-31 3.4E-36 260.1 16.3 203 102-306 9-226 (226)
35 COG3425 PksG 3-hydroxy-3-methy 100.0 5.3E-31 1.1E-35 270.3 20.8 313 107-492 2-315 (377)
36 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 1.7E-30 3.7E-35 277.1 22.6 316 107-490 1-376 (454)
37 cd00327 cond_enzymes Condensin 100.0 4.5E-28 9.7E-33 240.1 16.5 238 182-485 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 4.9E-25 1.1E-29 227.0 15.4 252 182-485 11-332 (332)
39 PF01154 HMG_CoA_synt_N: Hydro 99.8 1.5E-18 3.3E-23 161.8 12.7 168 104-306 1-173 (174)
40 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 2.9E-19 6.3E-24 150.6 7.2 84 401-487 7-90 (90)
41 PF02797 Chal_sti_synt_C: Chal 99.8 1.2E-18 2.5E-23 160.7 10.4 119 343-488 25-150 (151)
42 KOG1393 Hydroxymethylglutaryl- 99.7 1E-15 2.2E-20 155.2 19.3 318 104-492 8-381 (462)
43 PRK06147 3-oxoacyl-(acyl carri 99.7 1.2E-15 2.6E-20 159.5 17.5 256 181-488 64-343 (348)
44 TIGR02845 spore_V_AD stage V s 99.7 4.6E-15 9.9E-20 150.7 20.1 115 183-307 51-173 (327)
45 PRK08304 stage V sporulation p 99.6 2.4E-13 5.2E-18 138.6 19.5 115 184-307 58-179 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.5 1.1E-12 2.4E-17 139.2 21.2 183 106-307 1-243 (406)
47 cd00751 thiolase Thiolase are 99.5 9E-13 2E-17 139.7 19.2 93 182-275 22-115 (386)
48 PRK09051 beta-ketothiolase; Pr 99.4 1.6E-11 3.6E-16 130.4 21.7 93 183-276 28-122 (394)
49 TIGR01930 AcCoA-C-Actrans acet 99.4 9.8E-12 2.1E-16 131.9 18.6 94 182-276 21-115 (386)
50 PRK05656 acetyl-CoA acetyltran 99.4 2.4E-11 5.2E-16 129.2 20.4 93 183-276 27-120 (393)
51 PRK06064 acetyl-CoA acetyltran 99.4 3.5E-11 7.6E-16 127.7 21.4 91 183-275 23-116 (389)
52 cd00829 SCP-x_thiolase Thiolas 99.4 4E-11 8.6E-16 126.4 21.0 93 182-276 16-109 (375)
53 PF08545 ACP_syn_III: 3-Oxoacy 99.4 1.3E-12 2.7E-17 107.9 7.1 79 237-327 1-79 (80)
54 smart00825 PKS_KS Beta-ketoacy 99.3 4.4E-11 9.5E-16 127.9 19.6 123 182-307 87-247 (424)
55 PRK09052 acetyl-CoA acetyltran 99.3 7.7E-11 1.7E-15 125.5 20.5 94 182-276 31-127 (399)
56 PRK08313 acetyl-CoA acetyltran 99.3 1.6E-10 3.4E-15 122.7 22.6 91 183-275 25-117 (386)
57 TIGR03150 fabF beta-ketoacyl-a 99.3 3.6E-10 7.8E-15 120.2 21.5 121 182-307 71-243 (407)
58 cd00828 elong_cond_enzymes "el 99.3 2.7E-10 5.9E-15 121.3 20.5 123 181-307 71-243 (407)
59 PRK06501 3-oxoacyl-(acyl carri 99.3 8.7E-10 1.9E-14 118.5 24.6 119 182-307 75-257 (425)
60 cd00833 PKS polyketide synthas 99.2 1E-09 2.2E-14 117.0 23.3 122 181-307 86-247 (421)
61 PRK05790 putative acyltransfer 99.2 4.1E-10 9E-15 119.7 20.1 92 183-275 27-119 (393)
62 PRK06954 acetyl-CoA acetyltran 99.2 5.4E-10 1.2E-14 119.0 19.7 94 182-276 31-125 (397)
63 PRK06445 acetyl-CoA acetyltran 99.2 4.6E-10 9.9E-15 119.5 18.9 90 183-275 33-126 (394)
64 PRK12404 stage V sporulation p 99.2 8.1E-10 1.8E-14 112.4 19.4 116 183-307 55-177 (334)
65 PRK07314 3-oxoacyl-(acyl carri 99.2 4.2E-09 9E-14 112.5 24.0 185 106-307 2-244 (411)
66 PRK07661 acetyl-CoA acetyltran 99.2 1.6E-09 3.5E-14 115.1 20.5 93 183-276 28-122 (391)
67 PRK06025 acetyl-CoA acetyltran 99.1 3E-09 6.5E-14 113.3 20.6 94 182-276 29-124 (417)
68 PRK06333 3-oxoacyl-(acyl carri 99.1 4.7E-09 1E-13 112.6 21.3 120 181-307 81-256 (424)
69 PRK06690 acetyl-CoA acetyltran 99.1 3E-09 6.4E-14 111.9 19.2 90 182-276 25-114 (361)
70 PLN02287 3-ketoacyl-CoA thiola 99.1 7.1E-09 1.5E-13 112.0 21.1 93 183-276 72-166 (452)
71 PRK08256 lipid-transfer protei 99.1 9.6E-09 2.1E-13 109.3 20.2 88 183-275 23-111 (391)
72 PLN02644 acetyl-CoA C-acetyltr 99.1 1.4E-08 3E-13 108.2 20.5 92 183-275 26-118 (394)
73 PRK07108 acetyl-CoA acetyltran 99.0 9.1E-10 2E-14 117.1 11.0 94 182-276 27-122 (392)
74 PRK08439 3-oxoacyl-(acyl carri 99.0 2.7E-08 5.8E-13 106.4 22.1 120 181-307 71-244 (406)
75 PRK06633 acetyl-CoA acetyltran 99.0 1.2E-08 2.5E-13 108.5 18.7 94 182-276 27-121 (392)
76 PRK08722 3-oxoacyl-(acyl carri 99.0 5.4E-08 1.2E-12 104.4 23.8 121 182-307 74-246 (414)
77 PRK06205 acetyl-CoA acetyltran 99.0 1.1E-09 2.5E-14 116.8 10.6 94 182-276 26-120 (404)
78 PRK08235 acetyl-CoA acetyltran 99.0 1.4E-09 3.1E-14 115.6 10.9 94 182-276 26-120 (393)
79 PRK08242 acetyl-CoA acetyltran 99.0 2.1E-09 4.6E-14 114.5 11.4 94 182-276 28-123 (402)
80 PRK06504 acetyl-CoA acetyltran 99.0 5.9E-08 1.3E-12 103.2 21.9 94 182-276 26-121 (390)
81 PRK07103 polyketide beta-ketoa 99.0 1.8E-08 4E-13 107.8 17.6 121 182-307 80-251 (410)
82 PRK06059 lipid-transfer protei 99.0 2.2E-09 4.8E-14 114.4 10.5 92 183-276 24-117 (399)
83 PRK12578 acetyl-CoA acetyltran 99.0 2.6E-09 5.6E-14 113.4 10.8 92 183-276 22-114 (385)
84 PRK08170 acetyl-CoA acetyltran 98.9 5.2E-09 1.1E-13 112.5 11.2 93 183-276 28-121 (426)
85 PRK07801 acetyl-CoA acetyltran 98.9 6.5E-08 1.4E-12 102.6 19.3 92 183-275 27-120 (382)
86 cd00826 nondecarbox_cond_enzym 98.9 6.1E-09 1.3E-13 110.8 10.9 93 182-276 23-117 (393)
87 PLN02787 3-oxoacyl-[acyl-carri 98.9 2.4E-07 5.3E-12 102.2 23.7 118 182-307 199-373 (540)
88 PRK09116 3-oxoacyl-(acyl carri 98.9 1.2E-07 2.6E-12 101.4 19.7 120 182-307 73-245 (405)
89 cd00832 CLF Chain-length facto 98.8 4.2E-07 9.2E-12 97.0 22.7 118 182-307 71-241 (399)
90 PRK05952 3-oxoacyl-(acyl carri 98.8 2.6E-07 5.6E-12 98.1 20.9 242 185-486 59-380 (381)
91 PRK09185 3-oxoacyl-(acyl carri 98.8 1E-06 2.2E-11 93.8 25.5 206 218-487 137-390 (392)
92 PRK06065 acetyl-CoA acetyltran 98.8 1.3E-08 2.9E-13 108.1 10.6 90 183-274 30-121 (392)
93 PLN02836 3-oxoacyl-[acyl-carri 98.8 7.4E-07 1.6E-11 96.3 24.2 121 182-307 93-267 (437)
94 PTZ00050 3-oxoacyl-acyl carrie 98.8 3.3E-07 7.2E-12 98.5 20.9 252 182-487 77-420 (421)
95 PF00108 Thiolase_N: Thiolase, 98.8 2E-08 4.2E-13 101.4 10.5 95 182-277 26-121 (264)
96 PRK07967 3-oxoacyl-(acyl carri 98.7 2.4E-06 5.3E-11 91.4 23.5 185 106-307 2-244 (406)
97 PRK07910 3-oxoacyl-(acyl carri 98.7 3.3E-06 7.2E-11 90.7 24.6 316 106-487 12-417 (418)
98 PRK06158 thiolase; Provisional 98.7 5.6E-08 1.2E-12 103.2 9.6 85 183-272 29-114 (384)
99 PRK13359 beta-ketoadipyl CoA t 98.7 1E-07 2.2E-12 101.7 11.3 94 182-276 26-122 (400)
100 PRK07516 acetyl-CoA acetyltran 98.7 8.2E-08 1.8E-12 102.1 10.4 92 183-276 23-117 (389)
101 PRK08963 fadI 3-ketoacyl-CoA t 98.7 7.5E-08 1.6E-12 103.7 10.2 94 182-276 29-123 (428)
102 PRK07851 acetyl-CoA acetyltran 98.7 1.1E-07 2.4E-12 101.7 11.0 92 183-276 28-122 (406)
103 PRK06289 acetyl-CoA acetyltran 98.6 1E-07 2.2E-12 101.8 10.2 90 183-276 27-122 (403)
104 PF00109 ketoacyl-synt: Beta-k 98.6 1.7E-07 3.7E-12 93.0 10.3 122 181-305 86-251 (254)
105 PRK07850 acetyl-CoA acetyltran 98.6 1.8E-07 3.9E-12 99.5 11.0 94 182-276 26-121 (387)
106 PRK09050 beta-ketoadipyl CoA t 98.6 1.8E-07 3.8E-12 99.9 10.6 94 182-276 26-122 (401)
107 PRK08131 acetyl-CoA acetyltran 98.6 2.4E-07 5.2E-12 98.9 11.2 94 182-276 26-121 (401)
108 PRK06366 acetyl-CoA acetyltran 98.6 2.8E-07 6.1E-12 98.0 10.9 94 182-276 26-120 (388)
109 TIGR02430 pcaF beta-ketoadipyl 98.6 2.7E-07 5.8E-12 98.5 10.7 94 182-276 25-121 (400)
110 TIGR02446 FadI fatty oxidation 98.5 2.9E-07 6.2E-12 99.2 9.9 94 182-276 31-125 (430)
111 PRK06157 acetyl-CoA acetyltran 98.5 5.4E-07 1.2E-11 96.2 11.0 92 183-276 28-120 (398)
112 PRK14691 3-oxoacyl-(acyl carri 98.5 1.6E-06 3.5E-11 90.7 14.0 118 183-307 5-174 (342)
113 PRK08947 fadA 3-ketoacyl-CoA t 98.5 4.9E-07 1.1E-11 96.2 10.1 94 182-276 27-123 (387)
114 PF07451 SpoVAD: Stage V sporu 98.5 5.3E-06 1.2E-10 83.7 16.4 116 184-308 53-175 (329)
115 PTZ00455 3-ketoacyl-CoA thiola 98.5 8.9E-07 1.9E-11 95.6 11.4 93 183-276 49-152 (438)
116 PRK06519 3-oxoacyl-(acyl carri 98.5 9.6E-06 2.1E-10 86.6 19.1 185 105-307 5-255 (398)
117 PRK06365 acetyl-CoA acetyltran 98.5 7.5E-07 1.6E-11 96.0 10.4 91 183-275 38-130 (430)
118 TIGR02445 fadA fatty oxidation 98.4 8.1E-07 1.8E-11 94.4 9.1 94 182-276 25-121 (385)
119 TIGR02813 omega_3_PfaA polyket 98.4 2E-05 4.3E-10 100.1 22.3 217 220-489 185-463 (2582)
120 PRK09268 acetyl-CoA acetyltran 98.3 2.4E-06 5.2E-11 92.0 11.0 94 182-276 31-125 (427)
121 PRK08142 acetyl-CoA acetyltran 98.1 1.1E-05 2.3E-10 86.0 9.6 87 183-274 26-112 (388)
122 PRK08257 acetyl-CoA acetyltran 98.0 3E-05 6.6E-10 85.1 11.3 91 183-275 28-120 (498)
123 COG0304 FabB 3-oxoacyl-(acyl-c 98.0 0.00057 1.2E-08 73.2 19.5 122 180-308 69-245 (412)
124 PRK07855 lipid-transfer protei 98.0 3.6E-05 7.8E-10 81.9 10.1 83 184-271 26-108 (386)
125 PRK06066 acetyl-CoA acetyltran 97.7 0.00021 4.6E-09 76.0 10.7 87 183-274 26-115 (385)
126 KOG1389 3-oxoacyl CoA thiolase 97.7 0.00071 1.5E-08 68.4 13.4 91 184-277 63-156 (435)
127 COG0183 PaaJ Acetyl-CoA acetyl 97.5 0.00034 7.5E-09 74.6 9.3 94 183-277 28-125 (392)
128 COG3321 Polyketide synthase mo 97.5 0.0038 8.3E-08 74.5 17.8 122 182-306 91-250 (1061)
129 PRK07937 lipid-transfer protei 97.3 0.001 2.2E-08 70.1 10.0 87 184-275 26-114 (352)
130 KOG1390 Acetyl-CoA acetyltrans 97.2 0.00081 1.7E-08 68.3 7.3 94 182-276 30-124 (396)
131 KOG1406 Peroxisomal 3-ketoacyl 96.8 0.0028 6.1E-08 62.9 6.4 85 187-276 34-119 (408)
132 PF08540 HMG_CoA_synt_C: Hydro 96.0 0.0027 5.9E-08 64.6 1.2 61 431-491 143-205 (282)
133 PF08541 ACP_syn_III_C: 3-Oxoa 94.8 0.033 7.2E-07 46.4 3.8 76 194-273 1-79 (90)
134 KOG1391 Acetyl-CoA acetyltrans 94.7 0.063 1.4E-06 53.4 5.8 91 183-276 29-123 (396)
135 KOG1394 3-oxoacyl-(acyl-carrie 94.7 0.23 4.9E-06 51.8 10.0 120 181-307 93-269 (440)
136 PRK06025 acetyl-CoA acetyltran 94.2 0.16 3.5E-06 54.7 8.2 91 187-304 318-416 (417)
137 TIGR00748 HMG_CoA_syn_Arc hydr 93.9 0.2 4.3E-06 52.5 8.3 83 182-270 206-293 (345)
138 PRK06816 3-oxoacyl-(acyl carri 93.7 0.29 6.2E-06 52.0 9.0 89 181-273 269-365 (378)
139 PRK09258 3-oxoacyl-(acyl carri 93.3 0.28 6E-06 50.9 7.9 88 179-273 234-327 (338)
140 PRK05963 3-oxoacyl-(acyl carri 93.2 0.23 5E-06 51.3 7.2 89 179-271 222-313 (326)
141 cd00825 decarbox_cond_enzymes 92.6 0.48 1E-05 48.7 8.5 77 185-261 206-286 (332)
142 PRK12879 3-oxoacyl-(acyl carri 92.4 0.45 9.8E-06 48.9 8.1 84 181-271 222-311 (325)
143 PRK07204 3-oxoacyl-(acyl carri 92.1 0.51 1.1E-05 48.8 8.0 83 181-270 227-315 (329)
144 TIGR00747 fabH 3-oxoacyl-(acyl 92.1 0.4 8.6E-06 49.3 7.1 84 181-271 216-305 (318)
145 PRK09352 3-oxoacyl-(acyl carri 92.0 0.38 8.3E-06 49.4 6.9 85 180-271 215-305 (319)
146 PRK04262 hypothetical protein; 91.8 0.39 8.4E-06 50.3 6.7 68 184-255 209-281 (347)
147 KOG1392 Acetyl-CoA acetyltrans 91.4 0.18 3.8E-06 51.0 3.4 93 183-276 67-160 (465)
148 PLN02326 3-oxoacyl-[acyl-carri 91.4 0.45 9.8E-06 50.5 6.8 87 181-271 277-366 (379)
149 PRK06840 hypothetical protein; 91.2 0.7 1.5E-05 48.0 7.9 81 184-271 237-322 (339)
150 cd00327 cond_enzymes Condensin 90.8 1.1 2.3E-05 44.1 8.5 76 186-261 147-226 (254)
151 PF13723 Ketoacyl-synt_2: Beta 90.4 5.6 0.00012 39.2 12.9 114 182-307 34-172 (218)
152 CHL00203 fabH 3-oxoacyl-acyl-c 90.4 0.84 1.8E-05 47.3 7.5 82 183-271 225-312 (326)
153 PRK07515 3-oxoacyl-(acyl carri 90.1 0.94 2E-05 47.9 7.7 86 180-271 267-358 (372)
154 PRK09050 beta-ketoadipyl CoA t 90.0 1.3 2.8E-05 47.6 8.7 69 187-259 300-376 (401)
155 cd00830 KAS_III Ketoacyl-acyl 89.8 0.93 2E-05 46.4 7.2 85 180-271 219-309 (320)
156 PRK08242 acetyl-CoA acetyltran 88.8 1.9 4.1E-05 46.4 8.9 56 400-456 315-370 (402)
157 PRK13359 beta-ketoadipyl CoA t 88.3 1.7 3.7E-05 46.7 8.2 85 401-487 312-399 (400)
158 PRK08257 acetyl-CoA acetyltran 88.3 2.4 5.2E-05 46.9 9.5 84 401-485 308-395 (498)
159 TIGR02430 pcaF beta-ketoadipyl 88.2 1.8 3.9E-05 46.5 8.3 81 402-487 313-399 (400)
160 PRK07851 acetyl-CoA acetyltran 87.3 1.9 4E-05 46.5 7.8 86 402-488 320-405 (406)
161 PRK06147 3-oxoacyl-(acyl carri 87.1 1.3 2.8E-05 46.5 6.4 87 186-272 236-330 (348)
162 PRK05656 acetyl-CoA acetyltran 87.0 1.6 3.6E-05 46.6 7.2 49 187-241 294-342 (393)
163 PRK07108 acetyl-CoA acetyltran 86.9 1.8 3.8E-05 46.4 7.3 55 402-457 307-361 (392)
164 PRK06445 acetyl-CoA acetyltran 86.7 2.3 5E-05 45.5 8.0 67 186-258 294-368 (394)
165 PRK08235 acetyl-CoA acetyltran 86.6 2.5 5.5E-05 45.2 8.3 83 402-486 308-391 (393)
166 PRK07850 acetyl-CoA acetyltran 86.2 4.2 9.1E-05 43.5 9.7 84 402-487 302-386 (387)
167 PRK09052 acetyl-CoA acetyltran 86.1 2.7 6E-05 45.1 8.3 92 186-304 299-398 (399)
168 PLN02287 3-ketoacyl-CoA thiola 86.0 2.3 5E-05 46.5 7.7 96 186-307 333-437 (452)
169 PRK06205 acetyl-CoA acetyltran 85.3 4.4 9.5E-05 43.5 9.4 86 401-488 314-403 (404)
170 COG0332 FabH 3-oxoacyl-[acyl-c 84.9 1.5 3.2E-05 45.8 5.3 55 177-235 216-270 (323)
171 PRK09051 beta-ketothiolase; Pr 84.8 2.2 4.9E-05 45.6 6.8 49 187-241 295-343 (394)
172 cd00831 CHS_like Chalcone and 84.4 2.2 4.8E-05 44.8 6.5 88 180-271 255-350 (361)
173 COG3425 PksG 3-hydroxy-3-methy 84.4 3.7 8E-05 43.5 8.0 82 183-270 208-296 (377)
174 PRK08963 fadI 3-ketoacyl-CoA t 84.4 5.3 0.00012 43.3 9.6 86 401-487 325-427 (428)
175 PRK06690 acetyl-CoA acetyltran 84.1 4.9 0.00011 42.6 9.0 69 186-260 260-336 (361)
176 PF02803 Thiolase_C: Thiolase, 84.1 3.3 7.2E-05 37.0 6.5 69 187-261 25-101 (123)
177 PRK12578 acetyl-CoA acetyltran 83.9 8 0.00017 41.1 10.5 58 401-459 273-348 (385)
178 PLN03169 chalcone synthase fam 83.4 3.6 7.9E-05 44.0 7.7 88 181-270 278-374 (391)
179 PRK06954 acetyl-CoA acetyltran 83.4 2.1 4.5E-05 45.9 5.9 91 187-304 298-396 (397)
180 cd00751 thiolase Thiolase are 82.9 5 0.00011 42.7 8.5 48 187-241 288-336 (386)
181 PRK05790 putative acyltransfer 82.7 3.5 7.5E-05 44.0 7.2 67 187-259 294-368 (393)
182 PRK06366 acetyl-CoA acetyltran 82.7 5.8 0.00012 42.4 8.9 82 402-488 302-387 (388)
183 TIGR02445 fadA fatty oxidation 82.5 9.9 0.00022 40.6 10.6 82 402-487 297-384 (385)
184 PRK07516 acetyl-CoA acetyltran 82.3 12 0.00026 39.9 11.1 58 401-459 276-351 (389)
185 PRK08947 fadA 3-ketoacyl-CoA t 82.0 9.1 0.0002 40.9 10.1 82 401-486 298-385 (387)
186 PRK12880 3-oxoacyl-(acyl carri 82.0 3 6.6E-05 43.9 6.4 70 181-254 239-312 (353)
187 PRK07661 acetyl-CoA acetyltran 80.8 3.1 6.8E-05 44.5 6.0 92 186-304 291-390 (391)
188 cd00827 init_cond_enzymes "ini 79.5 5.5 0.00012 40.7 7.2 92 178-273 217-315 (324)
189 PRK07801 acetyl-CoA acetyltran 77.8 5.3 0.00011 42.5 6.6 67 187-259 283-357 (382)
190 PRK08131 acetyl-CoA acetyltran 77.7 9.6 0.00021 41.0 8.6 54 402-456 313-368 (401)
191 TIGR01835 HMG-CoA-S_prok 3-hyd 77.1 6 0.00013 42.1 6.8 74 180-254 201-286 (379)
192 TIGR01930 AcCoA-C-Actrans acet 75.9 6.7 0.00015 41.8 6.8 48 187-241 289-337 (386)
193 cd00829 SCP-x_thiolase Thiolas 75.5 9.8 0.00021 40.0 7.9 43 186-232 253-295 (375)
194 PRK06504 acetyl-CoA acetyltran 75.2 7.6 0.00016 41.6 6.9 51 187-245 291-342 (390)
195 PRK06059 lipid-transfer protei 74.7 24 0.00051 37.8 10.6 58 401-459 289-364 (399)
196 COG1214 Inactive homolog of me 74.5 10 0.00022 37.4 7.1 58 184-241 39-97 (220)
197 PRK06158 thiolase; Provisional 73.6 24 0.00053 37.5 10.3 30 401-430 270-299 (384)
198 TIGR02446 FadI fatty oxidation 72.9 17 0.00037 39.4 9.0 56 402-458 328-400 (430)
199 PF00814 Peptidase_M22: Glycop 72.7 6.5 0.00014 39.8 5.4 58 178-240 26-88 (268)
200 PRK09268 acetyl-CoA acetyltran 71.7 22 0.00048 38.5 9.6 25 186-210 311-335 (427)
201 PRK09185 3-oxoacyl-(acyl carri 71.5 17 0.00036 38.8 8.5 74 187-261 263-340 (392)
202 PF02801 Ketoacyl-synt_C: Beta 71.5 1.3 2.7E-05 39.0 -0.0 75 187-261 28-110 (119)
203 PRK06289 acetyl-CoA acetyltran 71.4 28 0.0006 37.3 10.2 77 401-478 292-393 (403)
204 PRK07937 lipid-transfer protei 70.7 32 0.0007 36.3 10.3 73 402-476 264-337 (352)
205 PRK06064 acetyl-CoA acetyltran 70.2 13 0.00027 39.6 7.2 40 187-231 261-301 (389)
206 TIGR01796 CM_mono_aroH monofun 70.0 12 0.00026 33.2 5.7 62 181-246 17-81 (117)
207 cd00826 nondecarbox_cond_enzym 68.6 13 0.00028 39.8 6.9 68 187-259 272-364 (393)
208 cd00834 KAS_I_II Beta-ketoacyl 68.0 9.1 0.0002 40.5 5.6 76 186-261 277-358 (406)
209 PLN02644 acetyl-CoA C-acetyltr 67.1 13 0.00027 39.9 6.4 67 187-259 294-368 (394)
210 PRK08170 acetyl-CoA acetyltran 66.6 26 0.00057 37.9 8.8 19 289-307 262-280 (426)
211 TIGR03725 bact_YeaZ universal 66.3 11 0.00025 36.2 5.4 36 183-218 34-69 (202)
212 PRK07855 lipid-transfer protei 66.1 19 0.00041 38.4 7.5 24 187-210 269-292 (386)
213 PRK06633 acetyl-CoA acetyltran 66.1 12 0.00026 40.2 6.0 67 187-260 293-368 (392)
214 TIGR00329 gcp_kae1 metallohydr 66.0 21 0.00045 36.8 7.6 35 184-218 50-84 (305)
215 PRK09604 UGMP family protein; 65.3 23 0.0005 37.0 7.9 48 183-230 52-104 (332)
216 PRK14691 3-oxoacyl-(acyl carri 65.0 16 0.00035 38.3 6.7 45 186-230 208-253 (342)
217 PRK07314 3-oxoacyl-(acyl carri 64.5 11 0.00025 40.1 5.5 44 187-230 279-323 (411)
218 COG0533 QRI7 Metal-dependent p 63.6 25 0.00054 36.9 7.5 91 178-275 47-139 (342)
219 cd00828 elong_cond_enzymes "el 63.3 13 0.00028 39.5 5.7 45 185-229 275-320 (407)
220 PRK08256 lipid-transfer protei 62.7 22 0.00047 38.0 7.2 68 187-258 267-358 (391)
221 PF02803 Thiolase_C: Thiolase, 62.7 11 0.00024 33.7 4.2 83 402-486 39-122 (123)
222 PRK14878 UGMP family protein; 62.6 15 0.00032 38.3 5.7 52 178-230 41-97 (323)
223 PRK06519 3-oxoacyl-(acyl carri 62.4 24 0.00051 38.0 7.4 44 186-230 282-326 (398)
224 PTZ00455 3-ketoacyl-CoA thiola 61.9 22 0.00047 38.8 7.1 41 187-232 312-353 (438)
225 cd02185 AroH Chorismate mutase 61.7 25 0.00053 31.2 6.0 63 181-246 17-81 (117)
226 smart00825 PKS_KS Beta-ketoacy 61.6 24 0.00052 37.6 7.4 45 186-230 281-326 (424)
227 TIGR03150 fabF beta-ketoacyl-a 61.5 16 0.00035 38.7 6.0 45 186-230 277-322 (407)
228 PTZ00050 3-oxoacyl-acyl carrie 61.2 23 0.0005 38.1 7.2 45 186-230 285-331 (421)
229 PF01135 PCMT: Protein-L-isoas 59.7 8.3 0.00018 37.6 3.1 41 442-482 49-89 (209)
230 PRK00768 nadE NAD synthetase; 59.1 2.1E+02 0.0045 29.2 13.1 152 126-301 3-180 (268)
231 PLN02787 3-oxoacyl-[acyl-carri 59.0 23 0.00049 39.7 6.7 45 186-230 407-452 (540)
232 COG0304 FabB 3-oxoacyl-(acyl-c 58.5 18 0.00039 39.1 5.7 43 187-229 279-322 (412)
233 PRK06501 3-oxoacyl-(acyl carri 57.4 25 0.00055 37.9 6.7 44 186-229 291-335 (425)
234 cd00832 CLF Chain-length facto 57.2 21 0.00045 38.3 5.9 75 186-261 272-351 (399)
235 COG4126 Hydantoin racemase [Am 56.9 67 0.0015 31.8 8.7 101 140-261 118-218 (230)
236 TIGR03723 bact_gcp putative gl 56.7 38 0.00083 35.1 7.6 55 183-241 50-109 (314)
237 PRK08313 acetyl-CoA acetyltran 55.7 49 0.0011 35.3 8.4 42 186-232 257-301 (386)
238 PRK05952 3-oxoacyl-(acyl carri 55.5 20 0.00044 38.2 5.5 44 186-229 256-300 (381)
239 KOG2707 Predicted metalloprote 54.9 33 0.00072 36.1 6.5 50 182-231 82-136 (405)
240 TIGR03722 arch_KAE1 universal 54.5 21 0.00045 37.1 5.2 37 178-215 42-78 (322)
241 PRK06333 3-oxoacyl-(acyl carri 54.3 37 0.0008 36.4 7.3 44 186-229 290-334 (424)
242 PRK06365 acetyl-CoA acetyltran 54.1 57 0.0012 35.4 8.7 41 187-232 296-339 (430)
243 KOG2708 Predicted metalloprote 53.6 45 0.00098 33.2 6.9 87 183-275 50-137 (336)
244 PF07736 CM_1: Chorismate muta 53.5 34 0.00073 30.5 5.5 58 180-241 16-76 (118)
245 PLN03170 chalcone synthase; Pr 53.1 48 0.001 35.7 7.8 71 181-255 278-354 (401)
246 PRK08722 3-oxoacyl-(acyl carri 51.0 32 0.00069 37.1 6.1 45 186-230 280-325 (414)
247 PF00195 Chal_sti_synt_N: Chal 50.6 86 0.0019 31.1 8.5 71 399-475 116-190 (226)
248 PRK09116 3-oxoacyl-(acyl carri 49.8 27 0.00059 37.5 5.4 44 186-229 277-321 (405)
249 PRK06066 acetyl-CoA acetyltran 49.5 65 0.0014 34.5 8.1 41 187-232 259-302 (385)
250 cd00833 PKS polyketide synthas 49.2 36 0.00078 36.1 6.2 45 185-229 280-325 (421)
251 PLN02836 3-oxoacyl-[acyl-carri 48.1 89 0.0019 33.8 9.1 44 186-229 301-345 (437)
252 PLN03173 chalcone synthase; Pr 47.9 59 0.0013 34.9 7.5 72 180-255 273-350 (391)
253 PRK09605 bifunctional UGMP fam 47.3 32 0.00069 38.3 5.6 84 178-273 45-134 (535)
254 PRK06157 acetyl-CoA acetyltran 46.6 97 0.0021 33.2 8.9 41 187-232 269-312 (398)
255 PLN03172 chalcone synthase fam 46.1 35 0.00077 36.5 5.5 70 181-254 274-349 (393)
256 PRK07910 3-oxoacyl-(acyl carri 45.5 43 0.00093 36.1 6.1 45 186-230 288-333 (418)
257 PLN03171 chalcone synthase-lik 44.1 68 0.0015 34.4 7.3 71 180-255 275-360 (399)
258 PRK06065 acetyl-CoA acetyltran 43.4 2.7E+02 0.0059 29.8 11.7 56 403-459 282-355 (392)
259 PRK09585 anmK anhydro-N-acetyl 43.2 58 0.0013 34.7 6.4 87 174-262 61-157 (365)
260 PTZ00340 O-sialoglycoprotein e 43.1 50 0.0011 34.9 5.9 53 185-241 52-109 (345)
261 PRK08142 acetyl-CoA acetyltran 42.2 95 0.0021 33.2 8.0 39 187-230 258-297 (388)
262 PRK08304 stage V sporulation p 42.1 1.1E+02 0.0023 32.2 8.1 88 185-274 209-312 (337)
263 PRK12404 stage V sporulation p 40.5 1.3E+02 0.0027 31.7 8.2 88 185-274 207-310 (334)
264 KOG1406 Peroxisomal 3-ketoacyl 35.7 34 0.00074 34.7 3.1 30 182-211 270-300 (408)
265 TIGR02435 CobG precorrin-3B sy 32.9 2.2E+02 0.0048 30.3 9.1 96 140-248 269-373 (390)
266 KOG1389 3-oxoacyl CoA thiolase 31.5 1.2E+02 0.0026 31.6 6.2 69 188-261 324-399 (435)
267 PLN03168 chalcone synthase; Pr 30.8 1.9E+02 0.0041 30.9 8.1 78 389-473 108-189 (389)
268 PRK07103 polyketide beta-ketoa 30.8 1.1E+02 0.0023 32.8 6.3 27 187-213 284-311 (410)
269 PF07451 SpoVAD: Stage V sporu 30.6 78 0.0017 32.9 4.8 98 172-274 194-307 (329)
270 COG2377 Predicted molecular ch 30.3 87 0.0019 33.3 5.2 59 173-231 62-130 (371)
271 PRK13410 molecular chaperone D 28.7 1.6E+02 0.0035 33.9 7.6 69 182-254 307-375 (668)
272 KOG1394 3-oxoacyl-(acyl-carrie 28.0 69 0.0015 34.0 3.9 45 186-230 303-348 (440)
273 TIGR02845 spore_V_AD stage V s 26.5 2E+02 0.0044 30.2 7.0 88 185-274 203-305 (327)
274 COG2518 Pcm Protein-L-isoaspar 26.3 63 0.0014 31.7 3.1 38 442-481 51-88 (209)
275 PRK05183 hscA chaperone protei 26.1 2.1E+02 0.0046 32.6 7.8 67 182-253 307-374 (616)
276 TIGR02350 prok_dnaK chaperone 25.6 1.6E+02 0.0034 33.3 6.6 67 182-252 303-369 (595)
277 PRK08329 threonine synthase; V 25.4 67 0.0015 33.7 3.4 34 446-479 312-345 (347)
278 PRK13411 molecular chaperone D 25.3 1.6E+02 0.0035 33.8 6.8 65 185-253 309-374 (653)
279 PTZ00009 heat shock 70 kDa pro 25.2 1.8E+02 0.0038 33.4 7.0 66 186-254 315-380 (653)
280 PF04241 DUF423: Protein of un 25.0 3.9E+02 0.0084 22.3 7.3 33 25-57 10-42 (89)
281 PLN03184 chloroplast Hsp70; Pr 23.8 2.3E+02 0.005 32.7 7.6 66 184-254 346-412 (673)
282 cd01453 vWA_transcription_fact 23.7 2E+02 0.0043 27.1 6.0 65 202-273 47-117 (183)
283 PLN02854 3-ketoacyl-CoA syntha 22.9 3.7E+02 0.0081 30.1 8.7 42 186-231 387-434 (521)
284 PTZ00186 heat shock 70 kDa pre 22.8 2.4E+02 0.0052 32.5 7.4 64 186-254 336-400 (657)
285 KOG1390 Acetyl-CoA acetyltrans 22.5 85 0.0018 32.9 3.3 83 399-486 308-394 (396)
286 TIGR01991 HscA Fe-S protein as 22.2 3E+02 0.0065 31.2 8.0 64 184-252 293-357 (599)
287 PRK00290 dnaK molecular chaper 22.1 2.5E+02 0.0053 32.0 7.4 66 183-252 306-371 (627)
288 CHL00094 dnaK heat shock prote 22.0 2.3E+02 0.005 32.2 7.1 63 186-252 311-373 (621)
289 KOG1202 Animal-type fatty acid 21.9 49 0.0011 40.3 1.7 125 183-308 88-248 (2376)
290 COG1153 FwdD Formylmethanofura 21.8 87 0.0019 27.9 2.8 52 448-506 31-88 (128)
291 PF09663 Amido_AtzD_TrzD: Amid 21.2 2.8E+02 0.006 29.3 6.7 73 179-257 127-202 (365)
292 KOG1391 Acetyl-CoA acetyltrans 21.0 97 0.0021 31.4 3.3 49 187-241 296-344 (396)
293 COG2971 Predicted N-acetylgluc 20.6 98 0.0021 32.0 3.4 39 173-211 38-76 (301)
294 TIGR02714 amido_AtzD_TrzD ring 20.1 1.5E+02 0.0033 31.1 4.5 33 179-211 128-161 (366)
295 TIGR03285 methan_mark_14 putat 20.0 2E+02 0.0043 30.7 5.4 43 177-219 60-104 (445)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.4e-119 Score=965.25 Aligned_cols=500 Identities=79% Similarity=1.330 Sum_probs=478.2
Q ss_pred cccccCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 009935 17 GRGNNNNKLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFL 96 (522)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (522)
..+++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|+..+|..++++++++++++++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (511)
T PLN02192 11 IEPSSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLVFL 90 (511)
T ss_pred cccchhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33477999999999999999999999999999999999998888999999999999889988888888888888888888
Q ss_pred HHHHHhcCCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHH
Q 009935 97 GTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMA 176 (522)
Q Consensus 97 ~~~~~~~~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma 176 (522)
+++|+++||++|||+||+||+|+++++++.+.++|+....|.|++++++||+|+++|||+|++||+|+..++.|+..+|+
T Consensus 91 ~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~ 170 (511)
T PLN02192 91 STLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMA 170 (511)
T ss_pred HHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHH
Q 009935 177 EARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQ 256 (522)
Q Consensus 177 ~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~ 256 (522)
++|+|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++||++|++
T Consensus 171 ~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~ 250 (511)
T PLN02192 171 EARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKH 250 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred HHHcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeee
Q 009935 257 LLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQ 336 (522)
Q Consensus 257 lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~ 336 (522)
+|+++++++||||++|.+|.+||.++||+++++|++|||||||+||++++.++++++|+|.+.++++.+++++.|+|+++
T Consensus 251 lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~ 330 (511)
T PLN02192 251 LLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQ 330 (511)
T ss_pred HHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceec
Confidence 99999999999999999999999999999999999999999999999976555567899999999999999999999999
Q ss_pred ccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChH
Q 009935 337 REDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRA 416 (522)
Q Consensus 337 ~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~ 416 (522)
++|++|+.|+.|+||+|.+++++++.|++++||.++|.+|+.++++.+.++++++.+++.|+|+++.+|||||+||+|++
T Consensus 331 ~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr~ 410 (511)
T PLN02192 331 EEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRA 410 (511)
T ss_pred ccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCHH
Confidence 99999999999999999999999999999999999999999988888899999998888889999999999999999999
Q ss_pred HHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEeccCCCCCC
Q 009935 417 VLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKE 496 (522)
Q Consensus 417 vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~~~~~ 496 (522)
+++.++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+|+++||||+|++++..+
T Consensus 411 IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~ 490 (511)
T PLN02192 411 VLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKE 490 (511)
T ss_pred HHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987542
Q ss_pred CCCcccccccCCCCCCcccc
Q 009935 497 KNPWIEEIHEFPVHVPRVAA 516 (522)
Q Consensus 497 ~~~w~~~~~~~p~~~~~~~~ 516 (522)
.|||+||||+|||++|.++.
T Consensus 491 ~~~w~~~i~~yp~~~~~~~~ 510 (511)
T PLN02192 491 KNPWMDEIHEFPVDVPKVST 510 (511)
T ss_pred CCCchhhHHhCCCCCCCCCC
Confidence 49999999999999998754
No 2
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.4e-117 Score=947.32 Aligned_cols=497 Identities=66% Similarity=1.133 Sum_probs=472.9
Q ss_pred ccccccCCCCCccccccchhhhhhhhHHHHHHH---HHHHHHHHHHHHHHhhcccCHHHHHHHHHH--hhhhHHHHHHHH
Q 009935 16 EGRGNNNNKLPNFLLSVRLKYVKLGYHYIISNA---LYLLLVPILIISSAHLSTLSVQDIVQLWNQ--LRYNLVTVTVCS 90 (522)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 90 (522)
..++++|++||||++|+|+||||+||||+++|+ ++++++|++++++.++++++++|+..+|.. ++++++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (521)
T PLN02854 17 SAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLTIATLVQITGLEFDTVSELWSNQALHLDTATRLTGS 96 (521)
T ss_pred ceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhHHhHHHHHHHH
Confidence 566788999999999999999999999999999 677899998888999999999999889987 788888988888
Q ss_pred HHHHHHHHHHHhcCCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCC
Q 009935 91 SLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVP 170 (522)
Q Consensus 91 ~~~~~~~~~~~~~~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~ 170 (522)
+++++++++|+++||++|||+||+||+|+++++++.+.++|+....|.|++++++||+||++|||+|++||+|+..++.|
T Consensus 97 ~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~ 176 (521)
T PLN02854 97 AFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRP 176 (521)
T ss_pred HHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHH
Q 009935 171 PNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLIS 250 (522)
Q Consensus 171 ~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~A 250 (522)
+..+|+++|+|++++++.|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++|
T Consensus 177 ~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~a 256 (521)
T PLN02854 177 PNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLIS 256 (521)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCc
Q 009935 251 IDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKC 330 (522)
Q Consensus 251 L~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~ 330 (522)
|++|+++|+++++++||||++|.+|.+||.++||++++++++|||||||+||++++.++++++|+|.+++++++++|++.
T Consensus 257 L~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~ 336 (521)
T PLN02854 257 IDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKN 336 (521)
T ss_pred HHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCc
Confidence 99999999999999999999999999999999999999999999999999999976444567899999999999999999
Q ss_pred cceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEE
Q 009935 331 YNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCI 410 (522)
Q Consensus 331 ~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~ 410 (522)
|+|+++++|+.|..|+++++++|.+++++++.|++.+||.|+|.+|+++|+...+.+.+.+..++.|+|+|+.||||||+
T Consensus 337 ~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~i 416 (521)
T PLN02854 337 YNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCI 416 (521)
T ss_pred cCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEE
Confidence 99999999988888999999999999999999999999999999999998888777777777788888999999999999
Q ss_pred cCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEecc
Q 009935 411 HAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRT 490 (522)
Q Consensus 411 H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~ 490 (522)
||+|++++++++++||+++++.++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++||||+|+
T Consensus 417 Hqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~~ 496 (521)
T PLN02854 417 HAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALRE 496 (521)
T ss_pred CCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC--CCCCCcccccccCCCCCCc
Q 009935 491 INPA--KEKNPWIEEIHEFPVHVPR 513 (522)
Q Consensus 491 ~~~~--~~~~~w~~~~~~~p~~~~~ 513 (522)
+++. . .|||+||||+|||++|.
T Consensus 497 ~~~~~~~-~~~w~~~i~~yp~~~~~ 520 (521)
T PLN02854 497 IPTGEST-GNPWADSIDRYPVKVPV 520 (521)
T ss_pred CCccccC-CCCchhhHhhCCCCCCC
Confidence 8764 4 69999999999999875
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.6e-115 Score=930.81 Aligned_cols=496 Identities=67% Similarity=1.127 Sum_probs=472.6
Q ss_pred CccccccCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 009935 15 AEGRGNNNNKLPNFLLSVRLKYVKLGYHYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMV 94 (522)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (522)
-+++|++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|+..+|..++++++++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (502)
T PLN02377 5 GEIRIHQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIIISIEASQMNPDDLRQLWIHLQYNLVSIIICSAFLV 84 (502)
T ss_pred ceEEEeehhhCchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778999999999999999999999999999999999999998889999999999998899888888888888888888
Q ss_pred HHHHHHHhcCCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCcc
Q 009935 95 FLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPC 174 (522)
Q Consensus 95 ~~~~~~~~~~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ 174 (522)
+++++|+++||++|||+||+||+|++++++|.+.++|+....|.|++++++||+||++++||++++|+|+..++.|++.+
T Consensus 85 ~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~ 164 (502)
T PLN02377 85 FGLTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPS 164 (502)
T ss_pred HHHHHHHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccch
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHH
Q 009935 175 MAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLA 254 (522)
Q Consensus 175 ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA 254 (522)
|+++++|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++||++|
T Consensus 165 ~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA 244 (502)
T PLN02377 165 MAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLA 244 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCcccee
Q 009935 255 KQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCV 334 (522)
Q Consensus 255 ~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~ 334 (522)
+++++++++++||||++|++|.+||.++++++++++++|||||||+||++++.++++++|++.++++++.+++++.|+|+
T Consensus 245 ~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i 324 (502)
T PLN02377 245 KDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCV 324 (502)
T ss_pred HHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCcccee
Confidence 99999999999999999999999988888899999999999999999999765555678999999999999999999999
Q ss_pred eeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCC
Q 009935 335 FQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGG 414 (522)
Q Consensus 335 ~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g 414 (522)
++++|+.|+.|+++++++|.+++++++.|++++||.|+|.+|++.++.....+++++..++++.|++++||||||+||+|
T Consensus 325 ~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqgg 404 (502)
T PLN02377 325 YQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGG 404 (502)
T ss_pred eeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCC
Confidence 99999899999999999999999999999999999999999999888777777888877777778899999999999999
Q ss_pred hHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEeccCCCC
Q 009935 415 RAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPA 494 (522)
Q Consensus 415 ~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~~~ 494 (522)
++++++++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+|+++||||+|++++.
T Consensus 405 r~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~ 484 (502)
T PLN02377 405 RAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPS 484 (502)
T ss_pred HHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCC
Q 009935 495 KEKNPWIEEIHEFPVHV 511 (522)
Q Consensus 495 ~~~~~w~~~~~~~p~~~ 511 (522)
. .|||+||||+|||++
T Consensus 485 ~-~~~w~~~i~~yp~~~ 500 (502)
T PLN02377 485 N-NSPWEDCIDKYPVKL 500 (502)
T ss_pred C-CCCchhhHhhCCCcc
Confidence 6 699999999999974
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1e-107 Score=871.28 Aligned_cols=469 Identities=57% Similarity=0.981 Sum_probs=447.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeEEeCCCC
Q 009935 42 HYIISNALYLLLVPILIISSAHLSTLSVQDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPE 121 (522)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Iv~~~~ylP~~~ 121 (522)
.|+++|+++++++|++++++.++.+++.+|++.+|..++.++++++.+++++++++++|+++||++|||+||+||+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p~~~ 81 (478)
T PLN02932 2 NYLMAHRFKLCFLPLMVGIAMEASRLSTQDLQNFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSH 81 (478)
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecCccc
Confidence 57899999999999998889999999999988899888888888888888888888999999999999999999999999
Q ss_pred ceecHHHHHHHhhhc---cCCChhh---HHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 009935 122 RQCTREIFMERSEQI---GCFSEEN---LAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLS 195 (522)
Q Consensus 122 ~~v~~~~~~e~~~~~---~~~~~e~---~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~ 195 (522)
+++|.+.++|+..+. |.|++++ ++||+||++||||++|||+|+..+..|+..+|+++|+|+++++++|+++||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~ 161 (478)
T PLN02932 82 LKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRKETEEVIIGAVDNLFR 161 (478)
T ss_pred ccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998766 7898888 9999999999999999999999988888899999999999999999999999
Q ss_pred hcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccc
Q 009935 196 KTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENIT 275 (522)
Q Consensus 196 ~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s 275 (522)
++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+||||+||++||++|+++++++++++||||++|.+|
T Consensus 162 ~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S 241 (478)
T PLN02932 162 NTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENIT 241 (478)
T ss_pred HcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecc
Confidence 99999999999999998888999999999999999989999999999999999999999999999999999999999999
Q ss_pred cccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCcccccccchhhHHH
Q 009935 276 LNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAV 355 (522)
Q Consensus 276 ~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~v 355 (522)
.+||.+++|++++++++|||||||+||++++.++++++|+|.++++++.++|++.|+|+++++|++|..|+.|+|++|.+
T Consensus 242 ~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~ 321 (478)
T PLN02932 242 QNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMV 321 (478)
T ss_pred cccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccchHH
Confidence 99998888999999999999999999999775445679999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHHHcCCCccccccc
Q 009935 356 AGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPS 435 (522)
Q Consensus 356 ~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S 435 (522)
++++++.||+++||.|+|++|++++++++.++++++.+.+.+.++++.+|||||+||+|++++++++++||++++++++|
T Consensus 322 ~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s 401 (478)
T PLN02932 322 AARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEAS 401 (478)
T ss_pred HHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHHH
Confidence 99999999999999999999999999999999999988888889999999999999999999999999999999999999
Q ss_pred ccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEeccCCCCCCCCCcccccccCCCCC
Q 009935 436 RMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHV 511 (522)
Q Consensus 436 ~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~~~~~~~~w~~~~~~~p~~~ 511 (522)
+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++|||++|++++.. .|||+||||+|||++
T Consensus 402 ~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~-~~~w~~~i~~yp~~~ 476 (478)
T PLN02932 402 RMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSA-NNPWEDCLHKYPVEI 476 (478)
T ss_pred HHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcC-CCCchhhHhhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998765 699999999999975
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.4e-99 Score=794.57 Aligned_cols=431 Identities=58% Similarity=1.022 Sum_probs=406.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEE
Q 009935 81 YNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHT 160 (522)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~ 160 (522)
+.+..+-+.++++++++++|+++||++|||+||+||+|++.+++|.+.++|+....|.|++++++||+||+++|||++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et 112 (466)
T PLN00415 33 FSPFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDT 112 (466)
T ss_pred CChhHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCe
Confidence 34444455555666677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEec
Q 009935 161 YFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLG 240 (522)
Q Consensus 161 ~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~ 240 (522)
|.|+..+..|+..+|+++++|+++.++.|+++||+++|++|+|||+||++||+++++|+++++|+++||+++++.+|||+
T Consensus 113 ~~p~~~~~~~~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~ 192 (466)
T PLN00415 113 YSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLS 192 (466)
T ss_pred eeCCccccCCCCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEec
Confidence 99999999898899999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEE
Q 009935 241 GMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTV 320 (522)
Q Consensus 241 g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v 320 (522)
||||+|+++||++|+++++++++++||||++|.+|.+||+++|++++++|++|||||||+||++++.++.+++|+|.+++
T Consensus 193 gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v 272 (466)
T PLN00415 193 GMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIV 272 (466)
T ss_pred cccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEE
Confidence 99999999999999999999999999999999999988889999999999999999999999998766556899999999
Q ss_pred EEEecCCCCccceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhccccccc
Q 009935 321 RTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPD 400 (522)
Q Consensus 321 ~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~ 400 (522)
+++.+.+++.|.|+++.+|++|..|+.|+|++|.+++++++.|+++++|.++|++|++++....+.+++++...+.|+|+
T Consensus 273 rt~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd 352 (466)
T PLN00415 273 RTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD 352 (466)
T ss_pred EecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCC
Confidence 99999889999999999999999999999999999999999999999999999999999988888888888777788999
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhh
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKC 480 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~ 480 (522)
++..++|||+|+||++|+++++++|||+++++++||++|+|||||||+|+||+|++++++|++++||++||+|||+||+|
T Consensus 353 ~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~ 432 (466)
T PLN00415 353 FKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKC 432 (466)
T ss_pred ccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchh
Confidence 98889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeEEeccCCCCCC--CCCcccccccCCCCC
Q 009935 481 NSAVWQALRTINPAKE--KNPWIEEIHEFPVHV 511 (522)
Q Consensus 481 ~s~v~r~~~~~~~~~~--~~~w~~~~~~~p~~~ 511 (522)
+++||||+|++++..+ .|||+||||+|||++
T Consensus 433 es~v~~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 433 NSIVWRALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred hHhHHHHhccCCcccccCCCCchhhHHhCCCCC
Confidence 9999999999876531 399999999999964
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.6e-77 Score=596.00 Aligned_cols=290 Identities=72% Similarity=1.161 Sum_probs=284.2
Q ss_pred HHhcCCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHH
Q 009935 100 YFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEAR 179 (522)
Q Consensus 100 ~~~~~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~ 179 (522)
|+++||++|||+||+||+|++++++|.+.++|+++..+.|++++++||+||++++||+++||+|+..+..|+..+|++++
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~ 80 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAR 80 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 180 NEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
+|++++++.|++++|+++|++|+|||+||+|||.|+|+||+++||+|+|||++|+++|||+||||+|++++|++|+++|+
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccC
Q 009935 260 VHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQRED 339 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d 339 (522)
.+|+.+||||++|++|.+||.|+||+|+++||||||||||+||||++.+++++||+|.|++|||++++|++|+|++|+||
T Consensus 161 ~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD 240 (290)
T PF08392_consen 161 AHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEED 240 (290)
T ss_pred hCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEc
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred CCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHH
Q 009935 340 DTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKV 389 (522)
Q Consensus 340 ~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v 389 (522)
++|..|+.|+||+|.++|+++|.||++|||+|||++|+++|.++++.||+
T Consensus 241 ~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk~ 290 (290)
T PF08392_consen 241 EEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARKV 290 (290)
T ss_pred CCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999988877653
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=5.7e-55 Score=444.93 Aligned_cols=321 Identities=21% Similarity=0.294 Sum_probs=262.8
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHH
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMV 185 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l 185 (522)
.+++|.++|+|+|+ ++++|+++.+.... ++|| |..++||++|+++.+++. ..+|+
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sdew------I~~rtGir~R~~a~~~e~----~s~la--------- 56 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDT----SDEW------IETRTGIRERRIAADDET----TSDLA--------- 56 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCC----Ccce------eeeecCCceeeecCCCcc----HHHHH---------
Confidence 46899999999999 89999999866554 7887 789999999999988764 46676
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNS 264 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~ 264 (522)
++|+++||+++|++|+|||+||++| +|++++|++|++||++||+. ++.+||++ .+|+|++.||++|..++++|..+
T Consensus 57 -~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 57 -VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred -HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999996 68999999999999999999 69999999 69999999999999999999999
Q ss_pred eEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCccc
Q 009935 265 YALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRV 344 (522)
Q Consensus 265 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~ 344 (522)
+||||++|++|+ +.+++||.. ..+|||||+|+||++.+.+. ++..+.+++|+..+++++.+......
T Consensus 134 ~vLVVg~e~~S~-~ld~~dR~t---~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~- 200 (323)
T COG0332 134 NVLVVGAETLSR-ILDWTDRDT---CVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT- 200 (323)
T ss_pred EEEEEehhHhhc-cCCHhhccc---eEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc-
Confidence 999999999998 567788864 58999999999999987332 56678889999988877776432111
Q ss_pred ccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHHH
Q 009935 345 GVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKN 424 (522)
Q Consensus 345 g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~~ 424 (522)
.+... ....+..-|+ |-+++...+. .++++..+.. .+..++|||||++||.|.++++.++++
T Consensus 201 ----~~~~~------~~~~~~m~Gr------~vfk~av~~~-~~~~~~~L~~-~~l~~~dId~~vpHQan~ri~~~i~~~ 262 (323)
T COG0332 201 ----PKEES------GGGLLVMDGR------EVFKFAVRAM-PKAIEEVLEK-AGLTPEDIDWFVPHQANLRIIEAIAKK 262 (323)
T ss_pred ----ccccc------cccceeeccH------HHHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEccccccHHHHHHHHHH
Confidence 00000 0011111121 1122222221 1222222222 344578999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEe
Q 009935 425 LELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQAL 488 (522)
Q Consensus 425 Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~ 488 (522)
||++++|+ ..++++|||||++|+|+.|+.+.++|++|+||+|++.+||+|++|+++++||.
T Consensus 263 l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 263 LGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred cCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 99999999 58999999999999999999999999999999999999999999999999984
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.3e-50 Score=427.58 Aligned_cols=348 Identities=19% Similarity=0.245 Sum_probs=270.1
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccCC-ChhhHHH-HHHHHHHhCCccEEeecCC----ccCC------C-CC
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGCF-SEENLAF-QKKILERSGLGQHTYFPEA----VLRV------P-PN 172 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~-~~e~~~f-~~ki~~~sGi~er~~~~~~----~~~~------~-~~ 172 (522)
.+++|.++|+..|+ +.++++++.+.+.+..+. +...++. .++|++++||+.|+..-+. .+.. | ..
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 56899999999999 899999999987654311 1122333 5789999999999875421 1100 1 12
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEE-EecCCCchHHHHHH
Q 009935 173 PCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSY-NLGGMGCSAGLISI 251 (522)
Q Consensus 173 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~-dl~g~gCsggl~AL 251 (522)
..+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++.++ +++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHH
Confidence 33567889999999999999999999999999999988765555999999999999999888664 555 8999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEecccccccccCCC--ccccccccccccceEEEEEecCCCcc-ccccceeeeEEEEEe-cCC
Q 009935 252 DLAKQLLQVHPNSYALVVSMENITLNWYFGND--RSMLVSNCLFRMGGAAILLSNRSSDR-RRSKYQLIHTVRTHK-GAD 327 (522)
Q Consensus 252 ~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAAAvLLs~~~~~~-~~a~~~L~~~v~t~~-~~d 327 (522)
++|.+++++++.++||||++|.+|.++..++| +++++++++|||||+|+||++.+... .++.|++.+..++.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 99999999999999999999999976655544 34567889999999999999865421 234577776544433 344
Q ss_pred CCccceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccE
Q 009935 328 DKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEH 407 (522)
Q Consensus 328 ~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~ 407 (522)
+.....+.. ++.++.+++++|+.+.+.+...+ +++++. .+....|+++
T Consensus 252 ~~~~~~i~~-----~G~~~~l~~~vp~~~~~~i~~~~----------------------~~~L~~-----~gl~~~di~~ 299 (393)
T PLN03172 252 GAIDGHLRE-----VGLTFHLLKDVPGLISKNIEKSL----------------------VEAFAP-----IGINDWNSIF 299 (393)
T ss_pred ccccceEEc-----CCcEEEEechHHHHHHHHHHHHH----------------------HHHhhh-----cCCCccccce
Confidence 433222221 22456778999987665432211 223221 1122478999
Q ss_pred EEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEEeChhHhh
Q 009935 408 FCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSE----AKGRMRKG---DRTWQIAFGSGFKC 480 (522)
Q Consensus 408 f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~----~~g~l~~G---d~VlliafGsG~~~ 480 (522)
|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |++++++||+|++|
T Consensus 300 ~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~ 379 (393)
T PLN03172 300 WIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTV 379 (393)
T ss_pred EEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCccee
Confidence 999999999999999999999999999999999999999999999999986 45788777 89999999999999
Q ss_pred hheeeEEe
Q 009935 481 NSAVWQAL 488 (522)
Q Consensus 481 ~s~v~r~~ 488 (522)
+++++||.
T Consensus 380 ~~~ll~~~ 387 (393)
T PLN03172 380 ETVVLHSV 387 (393)
T ss_pred eeeeeEec
Confidence 99999995
No 9
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=7.8e-51 Score=425.74 Aligned_cols=344 Identities=40% Similarity=0.610 Sum_probs=265.3
Q ss_pred eEEEEEeEEeCCCCceecHHHHHHHhhhccC--CChhhHHHHHHHHHHhCCccEEeecC--CccC-------CCCCccHH
Q 009935 108 VYLVDFACYKPEPERQCTREIFMERSEQIGC--FSEENLAFQKKILERSGLGQHTYFPE--AVLR-------VPPNPCMA 176 (522)
Q Consensus 108 v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~--~~~e~~~f~~ki~~~sGi~er~~~~~--~~~~-------~~~~~~ma 176 (522)
+||.++++|+|+ ++++|+++.+++..... +.+...++.++|++++||++|+++.+ ++.. .+.....+
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 689999999999 89999999998764211 01234555678999999999999865 3311 11234466
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHH
Q 009935 177 EARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQ 256 (522)
Q Consensus 177 ~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~ 256 (522)
.+.+++.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 78899999999999999999999999999999998777899999999999999997899999997799999999999999
Q ss_pred HHHcCCCCeEEEEEecccccccccCCC-ccccccccccccceEEEEEecCCCccc--cccceeeeEEEEEecCCCCccce
Q 009935 257 LLQVHPNSYALVVSMENITLNWYFGND-RSMLVSNCLFRMGGAAILLSNRSSDRR--RSKYQLIHTVRTHKGADDKCYNC 333 (522)
Q Consensus 257 lL~~~~~~~aLVVs~E~~s~~~~~~~d-r~~l~~~~lfgDGAAAvLLs~~~~~~~--~a~~~L~~~v~t~~~~d~~~~~~ 333 (522)
++++++.++||||++|..|. ++++.| +.+.+++++|||||+|+||++++.... ...+++.+.........+....
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~- 237 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMG- 237 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCCceE-
Confidence 99999999999999999988 566666 766667899999999999998765321 1234443322111111100000
Q ss_pred eeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhccccc--ccccccccEEEEc
Q 009935 334 VFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYI--PDFKLAFEHFCIH 411 (522)
Q Consensus 334 ~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~--~~~~~did~f~~H 411 (522)
+... +....+.+++++++...+ ...++++..+++ . +...+|||||++|
T Consensus 238 -~~~~--~~~~~~~~~~~v~~~~~~--------------------------~~~~~i~~~L~~-~~~g~~~~did~~~~H 287 (361)
T cd00831 238 -WHLG--EEGLTFVLSRDVPRLVEK--------------------------NLERVLRKLLAR-LGIGLFKLAFDHWCVH 287 (361)
T ss_pred -EEEE--cceEEEEeChhHHHHHHH--------------------------HHHHHHHHHhcc-ccCCCccccceEEEEC
Confidence 0000 011122222323322111 112233333333 3 4556899999999
Q ss_pred CCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheee
Q 009935 412 AGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVW 485 (522)
Q Consensus 412 ~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~ 485 (522)
|+|+++++.+++.||++++++++|++++++||||||+|+|+.|++++++|++++||+|++++||+|++|++++|
T Consensus 288 ~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 288 PGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999987
No 10
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=8.3e-50 Score=421.27 Aligned_cols=350 Identities=19% Similarity=0.242 Sum_probs=261.1
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccC--CChhhHHHHHHHHHHhCCccEEeecCCc----cC------CCC-C
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGC--FSEENLAFQKKILERSGLGQHTYFPEAV----LR------VPP-N 172 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~--~~~e~~~f~~ki~~~sGi~er~~~~~~~----~~------~~~-~ 172 (522)
.+++|.++|+-.|+ +.++++++.+.+..... ..++..+-++||++++||+.|+..-+.+ +. .|+ .
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 56899999999999 89999999998765421 1222233357899999999998653221 10 011 2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCe-eEEEecCCCchHHHHHH
Q 009935 173 PCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNI-TSYNLGGMGCSAGLISI 251 (522)
Q Consensus 173 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsggl~AL 251 (522)
..++.+.+++.+|+.+|+++||+++|++++|||+||++|++.+..|+++++|+++||+++++ +++|++ +||+||+.||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 33567889999999999999999999999999999999765566999999999999999766 488988 7999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEecccccccccCC--CccccccccccccceEEEEEecCCCcc-ccccceeeeEEEEEec-CC
Q 009935 252 DLAKQLLQVHPNSYALVVSMENITLNWYFGN--DRSMLVSNCLFRMGGAAILLSNRSSDR-RRSKYQLIHTVRTHKG-AD 327 (522)
Q Consensus 252 ~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~--dr~~l~~~~lfgDGAAAvLLs~~~~~~-~~a~~~L~~~v~t~~~-~d 327 (522)
++|++++++++.++||||++|.+|.+|.... +.+.++++++|||||+|+||++++... .+..+++.....+.+. ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 9999999999999999999999998664322 234456789999999999999865321 1123444322222222 22
Q ss_pred CCccceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccE
Q 009935 328 DKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEH 407 (522)
Q Consensus 328 ~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~ 407 (522)
+. .. ... ++. +..+.+++++|++..+.++ ++++..++. .+....|+++
T Consensus 251 ~~-~~-~~~--~~~-g~~~~l~~~vp~~i~~~~~--------------------------~~l~~~l~~-~~~~~~d~~~ 298 (389)
T PLN03168 251 GA-ID-GHL--TEA-GLIFHLMKDVPGLISKNIE--------------------------KFLNEARKC-VGSPDWNEMF 298 (389)
T ss_pred Cc-cC-ceE--ecC-ceEEEECHHHHHHHHHHHH--------------------------HHHHHHHHh-cCCCccccce
Confidence 21 10 001 111 2345566777765443221 122211111 1122357789
Q ss_pred EEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCC--------CEEEEEEeChhHh
Q 009935 408 FCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKG--------DRTWQIAFGSGFK 479 (522)
Q Consensus 408 f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~G--------d~VlliafGsG~~ 479 (522)
|++||+|++|++.++++||+++|++..|+.++++||||||+|+++.|+++.++ ++++| |+++++|||+||+
T Consensus 299 ~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t 377 (389)
T PLN03168 299 WAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLT 377 (389)
T ss_pred EEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhh
Confidence 99999999999999999999999999889999999999999999999998865 66554 8999999999999
Q ss_pred hhheeeEEeccC
Q 009935 480 CNSAVWQALRTI 491 (522)
Q Consensus 480 ~~s~v~r~~~~~ 491 (522)
|+++++||..++
T Consensus 378 ~~~~llr~~~~~ 389 (389)
T PLN03168 378 LEVLVLRAAANV 389 (389)
T ss_pred hhhhhheecccC
Confidence 999999997653
No 11
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.1e-49 Score=421.03 Aligned_cols=354 Identities=19% Similarity=0.277 Sum_probs=261.5
Q ss_pred HhcCCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHH-HHHHHHHHhCCccEEeecCCc----c---CCCCC
Q 009935 101 FMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLA-FQKKILERSGLGQHTYFPEAV----L---RVPPN 172 (522)
Q Consensus 101 ~~~~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~-f~~ki~~~sGi~er~~~~~~~----~---~~~~~ 172 (522)
..+.|.+++|.++|+|.|+ ++++|+++.+.+.....-++++++ ..+||++++||++|+++.+++ + ..+..
T Consensus 15 ~~~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 92 (391)
T PLN03169 15 RAANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGT 92 (391)
T ss_pred ccCCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCC
Confidence 3467889999999999999 899999999864432111344433 357899999999999874221 0 00111
Q ss_pred cc----HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCe-eEEEecCCCchHH
Q 009935 173 PC----MAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNI-TSYNLGGMGCSAG 247 (522)
Q Consensus 173 ~~----ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsgg 247 (522)
.+ +..+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++ ++||++ +||+|+
T Consensus 93 ~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~ 171 (391)
T PLN03169 93 PTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGG 171 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHH
Confidence 22 334678899999999999999999999999999999888999999999999999998777 479998 699999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEecccccccccCC-C-ccccccccccccceEEEEEecCCCcc-ccccceeeeEEEEEe
Q 009935 248 LISIDLAKQLLQVHPNSYALVVSMENITLNWYFGN-D-RSMLVSNCLFRMGGAAILLSNRSSDR-RRSKYQLIHTVRTHK 324 (522)
Q Consensus 248 l~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~-d-r~~l~~~~lfgDGAAAvLLs~~~~~~-~~a~~~L~~~v~t~~ 324 (522)
+.||++|.+++++++.++||||++|..|.++.... + ....+++++|||||+|+||++++... ....+++.......+
T Consensus 172 ~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~i 251 (391)
T PLN03169 172 VAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFL 251 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEc
Confidence 99999999999999999999999999887553221 1 22344678999999999999765321 112333322211111
Q ss_pred cCCCCccceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhccccccccccc
Q 009935 325 GADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLA 404 (522)
Q Consensus 325 ~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~d 404 (522)
. ++. +.+.....++| ..+.+++++|+.+.+.+.. ..+++++. .+...+|
T Consensus 252 p-~~~--~~~~~~~~~~g-~~~~~g~~v~~~~~~~~~~----------------------~i~~~L~~-----~gl~~~d 300 (391)
T PLN03169 252 P-GTE--KTIDGRLTEEG-INFKLGRELPQKIEDNIEG----------------------FCKKLMKK-----AGLVEKD 300 (391)
T ss_pred C-CCc--cccCceecCCc-eEEEECcHHHHHHHHHHHH----------------------HHHHHHHH-----cCCCCCC
Confidence 1 110 00000011111 2334556666554332111 11233322 2223456
Q ss_pred cc--EEEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCC---CCCEEEEEEeChhHh
Q 009935 405 FE--HFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMR---KGDRTWQIAFGSGFK 479 (522)
Q Consensus 405 id--~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~---~Gd~VlliafGsG~~ 479 (522)
+| +|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|++++++++++ +||++++++||+||+
T Consensus 301 id~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s 380 (391)
T PLN03169 301 YNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGIT 380 (391)
T ss_pred CCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHh
Confidence 87 9999999999999999999999999988889999999999999999999999888876 699999999999999
Q ss_pred hhheeeEEe
Q 009935 480 CNSAVWQAL 488 (522)
Q Consensus 480 ~~s~v~r~~ 488 (522)
|+++++||.
T Consensus 381 ~~~~ll~~~ 389 (391)
T PLN03169 381 FEGILARNL 389 (391)
T ss_pred HHHHHHhhh
Confidence 999999985
No 12
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=2.3e-49 Score=417.74 Aligned_cols=351 Identities=19% Similarity=0.237 Sum_probs=266.9
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccC--CChhhHHHHHHHHHHhCCccEEeecCCc----c---CC---C-CC
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGC--FSEENLAFQKKILERSGLGQHTYFPEAV----L---RV---P-PN 172 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~--~~~e~~~f~~ki~~~sGi~er~~~~~~~----~---~~---~-~~ 172 (522)
.+++|.++|+-.|+ ++++++++.+.+..... ..++..+.++||++++||+.|+..-+.+ + .. | ..
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 56899999999999 89999999998865431 1222233367899999999998653211 1 10 1 12
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHH
Q 009935 173 PCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISID 252 (522)
Q Consensus 173 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~ 252 (522)
..+..+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++..|+++||+++++..+.+.++||+|++.||+
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~ 172 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHH
Confidence 23567889999999999999999999999999999998755555899999999999999777554444489999999999
Q ss_pred HHHHHHHcCCCCeEEEEEecccccccccCCCc--cccccccccccceEEEEEecCCCcc-ccccceeeeEEEEEe-cCCC
Q 009935 253 LAKQLLQVHPNSYALVVSMENITLNWYFGNDR--SMLVSNCLFRMGGAAILLSNRSSDR-RRSKYQLIHTVRTHK-GADD 328 (522)
Q Consensus 253 lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr--~~l~~~~lfgDGAAAvLLs~~~~~~-~~a~~~L~~~v~t~~-~~d~ 328 (522)
+|++++++++.++||||++|.+|.+|+.++|+ +.++++++|||||+|+||++.+... .++.|++.+..++.. .+++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~ 252 (391)
T PLN03173 173 LAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDG 252 (391)
T ss_pred HHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCcc
Confidence 99999999999999999999999766555553 4567789999999999999754321 123567665443333 3343
Q ss_pred CccceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEE
Q 009935 329 KCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHF 408 (522)
Q Consensus 329 ~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f 408 (522)
.....+ .. ++.++.+++++|+++.+.+... .+++++. .+....|+|+|
T Consensus 253 ~~~~~i-~~----~G~~~~l~~~vp~~~~~~~~~~----------------------i~~~L~~-----~gl~~~di~~~ 300 (391)
T PLN03173 253 AIDGHL-RE----VGLTFHLLKDVPGLISKNVEKS----------------------LTEAFKP-----LGISDWNSLFW 300 (391)
T ss_pred ceeeEE-Ec----CceEEEEecHHHHHHHHHHHHH----------------------HHHHHHh-----cCCCccccCeE
Confidence 321111 11 2245677888887765432211 1233332 12225789999
Q ss_pred EEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHc----CCCCCC---CEEEEEEeChhHhhh
Q 009935 409 CIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK----GRMRKG---DRTWQIAFGSGFKCN 481 (522)
Q Consensus 409 ~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~----g~l~~G---d~VlliafGsG~~~~ 481 (522)
++||+|+++++.+++.||++++++.+|++++++||||||+|+|+.|+++.++ |.+++| ++++++|||+||+++
T Consensus 301 v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e 380 (391)
T PLN03173 301 IAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVE 380 (391)
T ss_pred EECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHH
Confidence 9999999999999999999999999999999999999999999999999853 444433 889999999999999
Q ss_pred heeeEEecc
Q 009935 482 SAVWQALRT 490 (522)
Q Consensus 482 s~v~r~~~~ 490 (522)
+++++|..+
T Consensus 381 ~~ll~~~~~ 389 (391)
T PLN03173 381 TVVLHSVAP 389 (391)
T ss_pred HHHHhhccC
Confidence 999998643
No 13
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=3.4e-48 Score=410.44 Aligned_cols=350 Identities=18% Similarity=0.224 Sum_probs=259.1
Q ss_pred CCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhh---HHHHHHHHHHhCCccEEeecCCc----------cCC-C
Q 009935 105 PRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEEN---LAFQKKILERSGLGQHTYFPEAV----------LRV-P 170 (522)
Q Consensus 105 ~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~---~~f~~ki~~~sGi~er~~~~~~~----------~~~-~ 170 (522)
+.+++|+++|+|+|+ ++++|+++.+++..... ++++ .+.+++|++++||++|+++.+++ ... +
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATK-SDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhc-ccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 467999999999999 89999999997532111 1222 12246899999999999986542 000 1
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCee-EEEecCCCchHHHH
Q 009935 171 PNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNIT-SYNLGGMGCSAGLI 249 (522)
Q Consensus 171 ~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~-~~dl~g~gCsggl~ 249 (522)
....+..+.+.+.+|+++|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++. ++++. +||+|++.
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 12345678889999999999999999999999999999997544458999999999999986653 56666 59999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEecccccccccCCCc---cccccccccccceEEEEEecCCCccccccceeeeEEEEEecC
Q 009935 250 SIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDR---SMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGA 326 (522)
Q Consensus 250 AL~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr---~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~ 326 (522)
||++|.+++++++.++||||++|.+|..+ ++.|+ ..++.+++|||||+|+||++.++...+..+++.+.....
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~--- 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAI--- 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEE---
Confidence 99999999999999999999999998743 44444 244567899999999999986643222345665433222
Q ss_pred CCCccceeeeccCCCcccccccc-hhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccc----cccc
Q 009935 327 DDKCYNCVFQREDDTKRVGVSLS-KDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPY----IPDF 401 (522)
Q Consensus 327 d~~~~~~~~~~~d~~g~~g~~ls-~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~----~~~~ 401 (522)
++...+.+....++ ++.-..++ +.+|....+.++. +++..+.+. .+..
T Consensus 252 ~p~~~~~~~~~~~~-~g~~~~~~~~~vp~~i~~~l~~--------------------------~l~~~l~~~~~~~~g~~ 304 (399)
T PLN03171 252 IPESDDAINMHFTE-GGLDGNIGTRQVPGLIGDNIER--------------------------CLLDAFAPLLGGDGGAE 304 (399)
T ss_pred ecCCchheEEEEEc-CCceEEECchhHHHHHHHHHHH--------------------------HHHHHHHhhcccccCCC
Confidence 33333333221111 11212344 5566554433221 222111110 1122
Q ss_pred cccccEEEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCC--CCCC---CEEEEEEeCh
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGR--MRKG---DRTWQIAFGS 476 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~--l~~G---d~VlliafGs 476 (522)
.+|++|+ +||+|+++++.+++.||++++++..|++++++||||||+|+|+.|+++.++++ +++| |+|++++||+
T Consensus 305 ~~di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~ 383 (399)
T PLN03171 305 WNDLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGP 383 (399)
T ss_pred cccceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcc
Confidence 4678766 69999999999999999999999888899999999999999999999988774 6888 9999999999
Q ss_pred hHhhhheeeEEecc
Q 009935 477 GFKCNSAVWQALRT 490 (522)
Q Consensus 477 G~~~~s~v~r~~~~ 490 (522)
|++|++++|++.+.
T Consensus 384 Glt~~~~ll~~~~~ 397 (399)
T PLN03171 384 GLTVDAMLLHASGH 397 (399)
T ss_pred cHHHHHHHhhcccC
Confidence 99999999999764
No 14
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=2.2e-48 Score=411.69 Aligned_cols=351 Identities=19% Similarity=0.236 Sum_probs=265.1
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccCC-ChhhHHH-HHHHHHHhCCccEEeecCCc---cC-C------C-CC
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGCF-SEENLAF-QKKILERSGLGQHTYFPEAV---LR-V------P-PN 172 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~-~~e~~~f-~~ki~~~sGi~er~~~~~~~---~~-~------~-~~ 172 (522)
.+.+|.++|+-.|+ ++++++++.+.+.+.... +....+. ++||++++||+.|+..-+++ .. . | ..
T Consensus 19 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 45899999999999 899999999988754311 1122333 68899999999998754211 11 0 1 12
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCe-eEEEecCCCchHHHHHH
Q 009935 173 PCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNI-TSYNLGGMGCSAGLISI 251 (522)
Q Consensus 173 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsggl~AL 251 (522)
..+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++ +++|++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 23567889999999999999999999999999999998765556999999999999999766 488998 7999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEecccccccccCCC--ccccccccccccceEEEEEecCCCcc-ccccceeeeEEEEEecCCC
Q 009935 252 DLAKQLLQVHPNSYALVVSMENITLNWYFGND--RSMLVSNCLFRMGGAAILLSNRSSDR-RRSKYQLIHTVRTHKGADD 328 (522)
Q Consensus 252 ~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAAAvLLs~~~~~~-~~a~~~L~~~v~t~~~~d~ 328 (522)
++|.+++++++.++||||++|.+|.++..+.+ .+.++++++|||||+|+||++++... .++.|++........ .+.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~-p~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTIL-PDS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEe-cCC
Confidence 99999999999999999999999986644432 23456778999999999999865421 112355543322211 111
Q ss_pred CccceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEE
Q 009935 329 KCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHF 408 (522)
Q Consensus 329 ~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f 408 (522)
+.+..... .+.| ..+.+++++|....+.+... .+++++. .+....|+++|
T Consensus 255 ~~~~~~~i--~~~G-~~~~l~~~vp~~~~~~i~~~----------------------v~~~L~~-----~gl~~~di~~~ 304 (401)
T PLN03170 255 EGAIDGHL--REVG-LTFHLLKDVPGLISKNIERS----------------------LEEAFKP-----LGITDYNSIFW 304 (401)
T ss_pred cccccceE--EcCC-eEEEEehHHHHHHHHHHHHH----------------------HHHHHHh-----cCCCccccCeE
Confidence 11100001 1122 34566788887655432211 1233332 12224789999
Q ss_pred EEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEEeChhHhhh
Q 009935 409 CIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSE----AKGRMRKG---DRTWQIAFGSGFKCN 481 (522)
Q Consensus 409 ~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~----~~g~l~~G---d~VlliafGsG~~~~ 481 (522)
++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |++++++||+||+|+
T Consensus 305 v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~ 384 (401)
T PLN03170 305 VAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVE 384 (401)
T ss_pred EecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHH
Confidence 99999999999999999999999988899999999999999999999986 46888888 899999999999999
Q ss_pred heeeEEecc
Q 009935 482 SAVWQALRT 490 (522)
Q Consensus 482 s~v~r~~~~ 490 (522)
++++||...
T Consensus 385 ~~ll~~~~~ 393 (401)
T PLN03170 385 TVVLHSVPI 393 (401)
T ss_pred hHHheeccc
Confidence 999999543
No 15
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-47 Score=377.72 Aligned_cols=345 Identities=23% Similarity=0.297 Sum_probs=281.5
Q ss_pred eEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHH-HhCCccEEeecCCccCCCCCcc----HHHHHHHH
Q 009935 108 VYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILE-RSGLGQHTYFPEAVLRVPPNPC----MAEARNEA 182 (522)
Q Consensus 108 v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~-~sGi~er~~~~~~~~~~~~~~~----ma~~~~ea 182 (522)
.+|.++++++|+ +++++.|+...+..... .+..+-+.|.+. ..+|+.|+...|.+++..+ .+ +..+.||+
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~~--~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~-~~f~ekN~ifie~a 76 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELPF--QEGREDIPRVLHANAQINRRHLVLPLDWYREP-HGFGEKNEIFIEEA 76 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhcc--ccchHHHHHHHhhccccccceecccHhhccCC-CChhhhhhhHHHHH
Confidence 379999999999 88999887776655432 222444566777 5788888888777776443 33 34578999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHP 262 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~ 262 (522)
.++.++|+++||+.+++.|+|||+|++.++++..+||+.++|+++||+++++..+.+.||||+|+..++..|+++++++|
T Consensus 77 ~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P 156 (356)
T COG3424 77 VPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAP 156 (356)
T ss_pred HHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCc
Confidence 99999999999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEecccccccccCCC-ccccccccccccceEEEEEecCCCccc--cccceeeeEEEEEecCCCCccceeeeccC
Q 009935 263 NSYALVVSMENITLNWYFGND-RSMLVSNCLFRMGGAAILLSNRSSDRR--RSKYQLIHTVRTHKGADDKCYNCVFQRED 339 (522)
Q Consensus 263 ~~~aLVVs~E~~s~~~~~~~d-r~~l~~~~lfgDGAAAvLLs~~~~~~~--~a~~~L~~~v~t~~~~d~~~~~~~~~~~d 339 (522)
..+|||||.|.+|.++...++ ++.+++..+||||+||++++.+..... ..++.+.+.. .+...|++ +-+-..-.
T Consensus 157 ~~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~-StL~~dse--~~Mgwdv~ 233 (356)
T COG3424 157 DANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSF-STLYPDSE--DIMGWDVG 233 (356)
T ss_pred cceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccc-cccCCccc--cccceeec
Confidence 999999999999998766554 358899999999999999998654221 1234444432 22332322 22222222
Q ss_pred CCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHH
Q 009935 340 DTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLD 419 (522)
Q Consensus 340 ~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~ 419 (522)
++ +..+.||+|+|......++.|+++ | +.. -+...+||++|+.|+||++|++
T Consensus 234 d~-G~~~vlSrdlp~lIe~~l~~~V~~-------------f--------L~~------~~ls~~dI~~w~~HPGG~KVid 285 (356)
T COG3424 234 DQ-GLKVVLSRDLPNLIESYLAPNVTT-------------F--------LAT------HGLSIEDIEAWVVHPGGPKVID 285 (356)
T ss_pred CC-cEEEEEcCchhHHHHHHhhhhHHH-------------H--------HHH------cCCchhhhceeeeCCCCchHHH
Confidence 33 366889999999988888777653 1 111 2344689999999999999999
Q ss_pred HHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEec
Q 009935 420 ELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALR 489 (522)
Q Consensus 420 ~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~ 489 (522)
++++.||+++|.++.||+.|++|||+||+++++.|.+.++++ .++|++.++++||+||+...++++|.+
T Consensus 286 a~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 286 AYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 999999999999999999999999999999999999999986 699999999999999999999999975
No 16
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=3.6e-47 Score=392.41 Aligned_cols=323 Identities=16% Similarity=0.222 Sum_probs=246.4
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHH
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMV 185 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l 185 (522)
.+++|+++|+|+|+ ++++++++.+..+. ++++ +.+++||++|+++.+++. ..+|+
T Consensus 2 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~~------i~~~~Gi~~r~~~~~~e~----~~~la--------- 56 (326)
T PRK05963 2 CSSRIAGFGHAVPD--RRVENAEIEAQLGL----ETGW------IERRTGIRCRRWAAPDET----LSDLA--------- 56 (326)
T ss_pred CccEEEEEEEECCC--CeecHHHHHHHcCC----CHHH------hhhccCCeEEEEcCCCCC----HHHHH---------
Confidence 36899999999999 89999999987642 4443 778899999999877653 45565
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNS 264 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~ 264 (522)
.+|+++||+++|++|+|||+||++| ++++..|+.+.+|+++||++ ++.+||+++ ||+|++.||++|.++|+++ .+
T Consensus 57 -~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~ 132 (326)
T PRK05963 57 -ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GK 132 (326)
T ss_pred -HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CC
Confidence 9999999999999999999999986 57899999999999999998 689999996 9999999999999999987 48
Q ss_pred eEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCccc
Q 009935 265 YALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRV 344 (522)
Q Consensus 265 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~ 344 (522)
+||||++|..+.. .++.++. +..+|||||+|+||++++... .. ++.+...++++.|+.+..+.+..
T Consensus 133 ~aLVv~~d~~s~~-~~~~~~~---~~~lfGDgA~A~ll~~~~~~~----~~---~l~~~~~t~~~~~~~~~~~~gg~--- 198 (326)
T PRK05963 133 PVLVVAANILSRR-INMAERA---SAVLFADAAGAVVLAPSAKAN----SG---VLGSQLISDGSHYDLIKIPAGGS--- 198 (326)
T ss_pred eEEEEEechhhcc-CCccccC---ceEEEeecceEEEEEecCCCC----Cc---eEEEEEEEcCCCCCeEEeCCCCc---
Confidence 9999999998863 3444543 357999999999999866431 12 23344566777676555443211
Q ss_pred ccccchhhHHHHHHhhhhcccc-cCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHH
Q 009935 345 GVSLSKDLMAVAGEALKTNITT-LGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEK 423 (522)
Q Consensus 345 g~~ls~d~~~v~g~~l~~ni~~-lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~ 423 (522)
..+.+.+.. .+ +..+.. .|+ +.+.++.... .+.++..+++ .+...+|||+|++||+|+++++.+.+
T Consensus 199 ~~~~~~~~~---~~--~~~~~~~~~~------~~~~~~~~~~-~~~~~~~L~~-~gl~~~did~~~~h~~~~~~~~~~~~ 265 (326)
T PRK05963 199 ARPFAPERD---AS--EFLMTMQDGR------AVFTEAVRMM-SGASQNVLAS-AAMTPQDIDRFFPHQANARIVDKVCE 265 (326)
T ss_pred CCCCccccc---cc--ccceEecCCH------HHHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHH
Confidence 011111000 00 000000 011 1111121111 2223333333 34456899999999999999999999
Q ss_pred HcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEE
Q 009935 424 NLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 487 (522)
Q Consensus 424 ~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 487 (522)
.||++++++ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++|+||
T Consensus 266 ~l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 266 TIGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred HcCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 999999998 5799999999999999999999999999999999999999999999999986
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.8e-46 Score=389.24 Aligned_cols=335 Identities=17% Similarity=0.184 Sum_probs=245.0
Q ss_pred CCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHH
Q 009935 104 RPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAE 183 (522)
Q Consensus 104 ~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~ 183 (522)
|-++++|++++.|+|+ ++++++++.+... + ++++ ..+|+++++||++|+++.+++. ..+|+
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~--~--~~~~--~~~~i~~~~Gi~~R~~~~~~e~----~~~la------- 64 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVF--S--NDIK--TLKRMKKVIGLNTRYICDENTC----VSDLG------- 64 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhc--C--cchh--hhhhhhhccCceEEEeCCCCCC----HHHHH-------
Confidence 4567999999999999 8999997544321 1 2222 2367888999999999876542 34554
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCC
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHP 262 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~ 262 (522)
.+|+++||+++|++|+|||+||++| ++++..|+++.+|+++||+++++.+||++ +||+|++.||++|++++++++
T Consensus 65 ---~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 65 ---KHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred ---HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999986 67999999999999999998889999997 599999999999999999998
Q ss_pred CCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCc
Q 009935 263 NSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTK 342 (522)
Q Consensus 263 ~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g 342 (522)
.+ ||||++|.+|.. .++.|+.. ..+|||||+|+||++++... . . ....+++..++.+..+.++..
T Consensus 141 ~~-~LVv~~e~~S~~-~~~~d~~~---~~lFGDGAaA~vl~~~~~~~---~-----~--~~~~~~~~~~~~~~~p~g~~~ 205 (353)
T PRK12880 141 GK-ILLICGDTLSKF-IHPKNMNL---APIFGDGVSATLIEKTDFNE---A-----F--FELGSDGKYFDKLIIPKGAMR 205 (353)
T ss_pred CC-EEEEEehhhhcc-CCcccCCc---eeeecccceEEEEEecCCCC---c-----e--EEEEecCCCCCeEEecCCCcC
Confidence 88 999999999984 35555542 57999999999999755421 1 1 134567777777666543211
Q ss_pred ccccccc-hh-hHHHHHHhh-hhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHH
Q 009935 343 RVGVSLS-KD-LMAVAGEAL-KTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLD 419 (522)
Q Consensus 343 ~~g~~ls-~d-~~~v~g~~l-~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~ 419 (522)
..+.... .+ .+.. ++.- ...+...|+. -+.+..... .++++..+++ .+...+|||+|++||+|+++++
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~------v~~~~~~~~-~~~i~~~L~~-~gl~~~did~~v~HQ~~~~i~~ 276 (353)
T PRK12880 206 IPKADIFNDDSLMQT-EEFRQLENLYMDGAN------IFNMALECE-PKSFKEILEF-SKVDEKDIAFHLFHQSNAYLVD 276 (353)
T ss_pred CCccccccccccccc-cccccCceEEEcCHH------HHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHH
Confidence 1111000 00 0000 0000 0001111221 122222211 2233333332 3444689999999999999999
Q ss_pred HHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEeccC
Q 009935 420 ELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTI 491 (522)
Q Consensus 420 ~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~ 491 (522)
.+++.||++++|+. ..++++||||||+|+++.|+++.++|+++ +++++||+|++|+++++||.+=+
T Consensus 277 ~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~~~ 342 (353)
T PRK12880 277 CIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKDLY 342 (353)
T ss_pred HHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECCcC
Confidence 99999999999982 35689999999999999999999888764 99999999999999999995433
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=1.1e-45 Score=389.59 Aligned_cols=330 Identities=18% Similarity=0.219 Sum_probs=242.7
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHH
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMV 185 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l 185 (522)
.+++|+++|.|+|+ ++++++++.+.++. +++ +|.+++||++|+++.+++. ..+ |
T Consensus 46 ~~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~~------~i~~~tGi~~R~~~~~~~~----~~~----------L 99 (379)
T PLN02326 46 SGSKLVGCGSAVPK--LLITNDDLSKLVDT----SDE------WIATRTGIRNRRVLSGDET----LTS----------L 99 (379)
T ss_pred CCcEEEEEEEECCC--ceecHHHHHHhcCC----chh------heecccCcceEeecCCCCC----HHH----------H
Confidence 46899999999999 89999999987652 343 3788999999999866542 344 4
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSY 265 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~ 265 (522)
+.+|+++||+++|++|+|||.||++|+.....++.+..|+++||++ ++.+||++ +||+|++.||++|.++|++++.++
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~ 177 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKN 177 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 5999999999999999999999998753323446789999999998 79999999 599999999999999999999999
Q ss_pred EEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCC---c
Q 009935 266 ALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDT---K 342 (522)
Q Consensus 266 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~---g 342 (522)
||||++|.++. +.+++|+.. ..+|||||+|+||++++... ..+ ..+.+.+++..++.+.....+. +
T Consensus 178 vLVv~~e~~s~-~~~~~d~~~---~~lfGDGAaAvlL~~~~~~~----~~i---~~~~~~t~g~~~~~~~~~~~g~~~~~ 246 (379)
T PLN02326 178 VLVIGADALSR-YVDWTDRGT---CILFGDGAGAVVLQACDDDE----DGL---LGFDMHSDGNGHKHLHATFKGEDDDS 246 (379)
T ss_pred EEEEEechhcC-CCCccccCc---eEEEcceeEEEEEEEcCCCC----Cce---EEEEEEEcCCCCCeEEecCCCCcccc
Confidence 99999999887 445566653 36999999999999876432 122 2334455655554443221100 0
Q ss_pred ccccccchhhHHHH-HHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHH
Q 009935 343 RVGVSLSKDLMAVA-GEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEL 421 (522)
Q Consensus 343 ~~g~~ls~d~~~v~-g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i 421 (522)
..+.. .+..... ...-..++...|+.+ +.+.... ..++++..+++ .+...+|||||++||+|+++++.+
T Consensus 247 ~~~~~--~~~~~~~~~~~~~~~~~~~g~~v------~~~~~~~-~~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~ 316 (379)
T PLN02326 247 SGGNT--NGVGDFPPKKASYSCIQMNGKEV------FKFAVRC-VPQVIESALQK-AGLTAESIDWLLLHQANQRIIDAV 316 (379)
T ss_pred ccccc--ccccccccccccccceEecCHHH------HHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHH
Confidence 00000 0000000 000001122222211 1111111 12233333333 344468999999999999999999
Q ss_pred HHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEE
Q 009935 422 EKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 487 (522)
Q Consensus 422 ~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 487 (522)
++.||++++++ ..++++||||+|||+|+.|++++++|++++||+|++++||+||+|++++|+|
T Consensus 317 ~~~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 317 AQRLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHHcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 99999999998 4789999999999999999999999999999999999999999999999986
No 19
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=9.6e-45 Score=374.83 Aligned_cols=325 Identities=13% Similarity=0.179 Sum_probs=239.7
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHH
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMV 185 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l 185 (522)
+.++|.+++.|+|+ ++++++++.+..+. +++ ++.+++||++|+++. ++. ..+ |
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~R~~~~-~~~----~~~----------l 55 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PEG------WVLKKSGVKTRHFVD-GET----SSY----------M 55 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CHh------HhhhccCceEEeecC-CCC----HHH----------H
Confidence 46899999999999 89999999887652 444 377889999999887 432 344 4
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCC-CeeEEEecCCCchHHHHHHHHHHHHHHcCCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRG-NITSYNLGGMGCSAGLISIDLAKQLLQVHPN 263 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~-~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~ 263 (522)
+.+|++++|+++|++|+|||+||+++ ++++..|+++..|+++||+++ ++.++|++ +||++++.||++|.+++++++.
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 59999999999999999999999986 567779999999999999985 47999999 5999999999999999999999
Q ss_pred CeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCcc
Q 009935 264 SYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKR 343 (522)
Q Consensus 264 ~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~ 343 (522)
++||||++|..+.. .+..++. +..+|||||+|+||++.+.. .+++ .++..++++.++....+...
T Consensus 135 ~~~Lvv~~e~~s~~-~~~~~~~---~~~lfGDGAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~~--- 199 (329)
T PRK07204 135 KRVLIISSEISSVG-LNWGQNE---SCILFGDGAAAVVITKGDHS-----SRIL---ASHMETYSSGAHLSEIRGGG--- 199 (329)
T ss_pred CEEEEEEeccccCC-CCcccCc---ceEEEecccEEEEEEEcCCC-----CcEE---EEEEEEecCCCCceEEecCC---
Confidence 99999999998763 2333332 24799999999999986542 2333 23334444433321111110
Q ss_pred cccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHH
Q 009935 344 VGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEK 423 (522)
Q Consensus 344 ~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~ 423 (522)
...+-..+.. .....+ .+...|+ ++..+......++++..+++ .+...+|||+|++||+|+.+++.+++
T Consensus 200 ~~~~~~~~~~-~~~~~~--~~~~~~~-------~~~~~~~~~~~~~i~~~L~~-~gl~~~did~~~~H~~~~~~~~~i~~ 268 (329)
T PRK07204 200 TMIHPREYSE-ERKEDF--LFDMNGR-------AIFKLSSKYLMKFIDKLLMD-AGYTLADIDLIVPHQASGPAMRLIRK 268 (329)
T ss_pred cCCCCccccc-ccccCc--eEEECCH-------HHHHHHHHHHHHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHH
Confidence 0000000000 000000 0000011 11111111123344444433 44557899999999999999999999
Q ss_pred HcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEE
Q 009935 424 NLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 487 (522)
Q Consensus 424 ~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 487 (522)
.||++++++ ..++++||||+|+|++++|+++.++|++++||+|++++||+|++|+++++++
T Consensus 269 ~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 269 KLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 999999998 5899999999999999999999999999999999999999999999999985
No 20
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.9e-44 Score=371.47 Aligned_cols=321 Identities=17% Similarity=0.254 Sum_probs=244.4
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHH
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMV 185 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l 185 (522)
.+++|.++|.|+|+ ++++++++.+..+. +++ ++++++||++|++..+++. ..+ |
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~~~----~~~----------l 56 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVEEY----TSD----------L 56 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCCCC----HHH----------H
Confidence 46899999999999 89999999987542 343 3788999999999876652 344 4
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNS 264 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~ 264 (522)
+.+|+++||+++|++++|||.||+++ ++++..|+.+.+|+++||++ ++.+++++ +||++++.||++|.++|++++.+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 59999999999999999999999986 56788999999999999998 58999999 69999999999999999999999
Q ss_pred eEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCccc
Q 009935 265 YALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRV 344 (522)
Q Consensus 265 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~ 344 (522)
+||||++|.++.. ....++.. .++|||||+|+||++++... ++ ..+...++++.++.++.+...
T Consensus 135 ~~Lvv~~e~~s~~-~~~~~~~~---~~~~GDgAaA~ll~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~---- 198 (325)
T PRK12879 135 KVLVIGAERLSKV-TDYTDRTT---CILFGDGAGAVVLEATENEP-----GF---IDYVLGTDGDGGDILYRTGLG---- 198 (325)
T ss_pred EEEEEEehhhcCc-CCccccCc---eEEEeecceEEEEEecCCCC-----Ce---EEEEEEEcCCCCCeEEEcCCC----
Confidence 9999999998763 34444442 47999999999999876431 22 334556666666655433210
Q ss_pred ccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHHH
Q 009935 345 GVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKN 424 (522)
Q Consensus 345 g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~~ 424 (522)
.....+. . .....+...|. +.+.+.... ..++++..+++ .+..++|||+|++||+|+++++.+++.
T Consensus 199 -~~~~~~~-~----~~~~~~~~~~~------~~~~~~~~~-~~~~i~~~L~~-~g~~~~did~~~~h~~~~~~~~~~~~~ 264 (325)
T PRK12879 199 -TTMDRDA-L----SGDGYIVQNGR------EVFKWAVRT-MPKGARQVLEK-AGLTKDDIDWVIPHQANLRIIESLCEK 264 (325)
T ss_pred -CCCCccc-c----ccCccEEEcCH------HHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 0000000 0 00001111111 111111111 11223333332 344468999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEE
Q 009935 425 LELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 487 (522)
Q Consensus 425 Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 487 (522)
||++++++. .++++||||+|+|++++|++++++|++++||+|++++||+|++|+++++||
T Consensus 265 lg~~~~~~~---~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 265 LGIPMEKTL---VSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred cCCCHHHhh---hhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 999999984 589999999999999999999999999999999999999999999999998
No 21
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=7.2e-45 Score=375.67 Aligned_cols=323 Identities=17% Similarity=0.234 Sum_probs=239.5
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHH
Q 009935 107 KVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVM 186 (522)
Q Consensus 107 ~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~ 186 (522)
.|+|+++|.|+|+ ++++++|+.+.++. +++ +|.+++||++|++..+++. .. +|+
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~----~~----------~la 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SDH------WISTRTGIKKRHLAPSSTS----LT----------KLA 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Chh------hEeeccCeEEEEeCCCCCC----HH----------HHH
Confidence 4899999999999 89999999988652 232 4778999999998876542 23 455
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSY 265 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~ 265 (522)
.+|+++||+++|++|+|||.||++|+ ++.. +..+..++++||++ ++.+++++ +||++++.||++|.++|+++..++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999874 4433 34578999999998 68899999 599999999999999999999999
Q ss_pred EEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCcccc
Q 009935 266 ALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVG 345 (522)
Q Consensus 266 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 345 (522)
+|||++|.+|. +.+++++. ...+|||||+|+||++.+.. .+.+ ....++++.++.+.....+.....
T Consensus 133 ~Lvv~~e~~s~-~~~~~~~~---~~~~fgDga~A~ll~~~~~~------~~~~---~~~~t~g~~~~~~~~~~~~~~~~~ 199 (326)
T CHL00203 133 ILVVGADTLSK-WIDWSDRK---TCILFGDGAGAAIIGASYEN------SILG---FKLCTDGKLNSHLQLMNKPVNNQS 199 (326)
T ss_pred EEEEEehhhhC-cCCcccCC---ceEEEcceeeEEEEEEcCCC------CeEE---EEEEEcCCCcceEEecCCCCCccc
Confidence 99999999987 34555543 35799999999999986542 1222 234456655554332211000000
Q ss_pred cccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHHHc
Q 009935 346 VSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 425 (522)
Q Consensus 346 ~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~~L 425 (522)
+... ..+. + . ...+...|+.+ +.+.... ..++++..+++ .+...+|||||++||+|+++++.+++.|
T Consensus 200 ~~~~-~~~~--~-~-~~~~~~~g~~~------~~~~~~~-~~~~i~~~L~~-~g~~~~did~~~~hq~~~~~~~~~~~~l 266 (326)
T CHL00203 200 FGTT-KLPQ--G-Q-YQSISMNGKEV------YKFAVFQ-VPAVIIKCLNA-LNISIDEVDWFILHQANKRILEAIANRL 266 (326)
T ss_pred cccc-cccc--C-C-cceEEECCHHH------HHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHh
Confidence 0000 0000 0 0 00111112211 1111111 12233333333 3455689999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEE
Q 009935 426 ELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 487 (522)
Q Consensus 426 gl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 487 (522)
|++++++ ..++++||||+|||+|+.|+++.++|++++||+|++++||+|++|+++|+||
T Consensus 267 gl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 267 SVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred CCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 9999999 5799999999999999999999999999999999999999999999999998
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.8e-44 Score=373.97 Aligned_cols=320 Identities=18% Similarity=0.199 Sum_probs=240.5
Q ss_pred CCceEEEEEeEEeCCCCceecHHHHHHHhhhcc---CCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHH
Q 009935 105 PRKVYLVDFACYKPEPERQCTREIFMERSEQIG---CFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNE 181 (522)
Q Consensus 105 ~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~---~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~e 181 (522)
.++|+|.+++.|+|+ ++++++++.+.+.... ..++ .++.+++||++|++.++++. ..
T Consensus 3 ~~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~~~----~~-------- 62 (338)
T PRK09258 3 YSNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEGTQ----LS-------- 62 (338)
T ss_pred ccceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCCCC----HH--------
Confidence 467999999999999 8999999998754211 1122 23667899999999765432 23
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
+|+.+|+++||+++|++++|||.||++| ++++..|+++.+|+++||+++++.+||+++ ||+|++.||++|.+++++
T Consensus 63 --~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~ 139 (338)
T PRK09258 63 --DGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIEL 139 (338)
T ss_pred --HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHc
Confidence 4559999999999999999999999986 568889999999999999987799999995 999999999999999999
Q ss_pred CCCCeEEEEEecccccccccCC------Cc------cccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCC
Q 009935 261 HPNSYALVVSMENITLNWYFGN------DR------SMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADD 328 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~~~~~~~------dr------~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~ 328 (522)
++.++||||++|..+..+ ++. +. ...+...+|||||+|+||++.+... ..+++.. ....+++
T Consensus 140 g~~~~~Lvv~~e~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~---~~~~~~~ 213 (338)
T PRK09258 140 GQIDYALVVSGESAREIV-EATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLG---GVTRAAT 213 (338)
T ss_pred CCCCEEEEEEecccchhc-cchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeee---eeeecCC
Confidence 999999999999987632 211 11 1123357899999999999865421 1234433 2233344
Q ss_pred CccceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEE
Q 009935 329 KCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHF 408 (522)
Q Consensus 329 ~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f 408 (522)
+.++.. ... ...+..+.+.+... +... ..++++..+++ .+...+|||+|
T Consensus 214 ~~~~~~-~~~------~~~~~~~~~~~~~~----------------------~~~~-~~~~~~~~L~~-~g~~~~did~~ 262 (338)
T PRK09258 214 EHHELC-QGG------RDGMRTDAVGLLKE----------------------GVEL-AVDTWEAFLAQ-LGWAVEQVDRV 262 (338)
T ss_pred Cccccc-ccC------ccceEEcHHHHHHH----------------------HHHH-HHHHHHHHHHH-cCCCHHHCCEE
Confidence 433211 110 01122222222111 1111 11223332322 33445899999
Q ss_pred EEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEE
Q 009935 409 CIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 487 (522)
Q Consensus 409 ~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 487 (522)
++||+|+++++.+++.||++++|+ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++++||
T Consensus 263 i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 263 ICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred ecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 999999999999999999999999 4688999999999999999999999999999999999999999999999986
No 23
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=2.5e-43 Score=365.85 Aligned_cols=328 Identities=17% Similarity=0.156 Sum_probs=242.7
Q ss_pred CCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHH
Q 009935 105 PRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEM 184 (522)
Q Consensus 105 ~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~ 184 (522)
|++|+|.+++.|+|+ ++++++++.+..+. +++ ++.+++|+.+|+++.+++. ..+|
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~~~----~~~l--------- 56 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPEDH----TSDM--------- 56 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCCCC----HHHH---------
Confidence 568999999999999 89999999887652 443 3668899999999876542 3455
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeec--CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc-C
Q 009935 185 VMFGAIDELLSKTGVKAKDIGILVVNCS--LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV-H 261 (522)
Q Consensus 185 l~~~Aa~~aL~~agi~p~dID~LI~~~s--~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~-~ 261 (522)
+.+|++++|+++|++|+|||.||++++ +++..|+++.+|++++|++ ++.+++++ +||++++.||++|.+++++ +
T Consensus 57 -a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g 133 (339)
T PRK06840 57 -AIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDP 133 (339)
T ss_pred -HHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCC
Confidence 499999999999999999999997743 5778999999999999997 78999998 5999999999999999999 6
Q ss_pred CCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCC
Q 009935 262 PNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDT 341 (522)
Q Consensus 262 ~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~ 341 (522)
..+++|||++|..+... +..++.... ...|||||+|+||++.+.. .++ +.+...++++.++.+..+.++
T Consensus 134 ~~~~~Lvv~~~~~s~~~-~~~~~~~~~-~~~~GDgAaA~ll~~~~~~-----~~i---l~~~~~t~~~~~~~~~~~~~g- 202 (339)
T PRK06840 134 SIENVLLVGGYRNSDLV-DYDNPRTRF-MFNFAAGGSAALLKKDAGK-----NRI---LGSAIITDGSFSEDVRVPAGG- 202 (339)
T ss_pred CccEEEEEeeccccccc-CcCCCCeee-eccCCCceeEEEEEecCCC-----Cce---EEEEEEEcCCccceEEecCCC-
Confidence 67899999999987632 333332210 1248999999999986542 334 344556677766665543221
Q ss_pred cccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHH----HHHHHHHHhhcccccccccccccEEEEcCCChHH
Q 009935 342 KRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFAT----LVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAV 417 (522)
Q Consensus 342 g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~----~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~v 417 (522)
...+++.+.... ++ ..+...+|. .+...+. ....++++..+++ .+...+|||+|++||.|+++
T Consensus 203 --~~~~~~~~~~~~-~~---~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~L~~-~gl~~~did~~~~h~~~~~~ 269 (339)
T PRK06840 203 --TKQPASPETVEN-RQ---HYLDVIDPE------SMKERLDEVSIPNFLKVIREALRK-SGYTPKDIDYLAILHMKRSA 269 (339)
T ss_pred --cCCCCccccccc-cc---ceEEEcCcH------HHHHHhHhhHHHHHHHHHHHHHHH-cCCCHHHCCEEEECCcCHHH
Confidence 111111111000 00 000000111 0110000 0012333333333 34456899999999999999
Q ss_pred HHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEe
Q 009935 418 LDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQAL 488 (522)
Q Consensus 418 l~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~ 488 (522)
++.+++.||++++++ .++.+||||+|+|++++|.++.++|++++||++++++||+|++|+++++||.
T Consensus 270 ~~~~~~~Lgl~~~~~----~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 270 HIALLEGLGLTEEQA----IYLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHHHHcCCCHHHe----EeHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 999999999999997 2689999999999999999999999999999999999999999999999994
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=3.9e-43 Score=360.22 Aligned_cols=319 Identities=20% Similarity=0.314 Sum_probs=242.7
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHH
Q 009935 107 KVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVM 186 (522)
Q Consensus 107 ~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~ 186 (522)
+++|.++++|+|+ ++++++++.+..+. +++ ++++++|+++|+++++++. ..+| +
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~~------~~~~~~Gi~~r~~~~~~~~----~~~l----------a 54 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SDE------WIRTRTGIRERRIADPGET----TSDL----------A 54 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CHH------HhhhccCceEEeeCCCCCC----HHHH----------H
Confidence 4799999999999 89999999998742 333 4778999999999977542 3444 5
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSY 265 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~ 265 (522)
.+|++++|+++|++++|||.||+++ ++++..|+.+.+|+++||++ ++.+++++ +||++++.||++|.+++++++.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999886 45777899999999999998 79999999 699999999999999999999999
Q ss_pred EEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCcccc
Q 009935 266 ALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVG 345 (522)
Q Consensus 266 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 345 (522)
+|||++|.++.. .+..++. ...+|||||+|+||++.+.. .++. .++..++++.++.+..+..+..
T Consensus 133 vLvv~~e~~s~~-~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i~---~~~~~~~~~~~~~~~~~~~~~~--- 197 (320)
T cd00830 133 VLVVGAETLSRI-LDWTDRS---TAVLFGDGAGAVVLEATEED-----PGIL---DSVLGSDGSGADLLTIPAGGSR--- 197 (320)
T ss_pred EEEEEehhhccc-cCcccCC---ceEEEeccceEEEEEecCCC-----CcEE---EEEEEEcCCCCCeEEeCCCCcC---
Confidence 999999998873 3333332 35899999999999987642 2343 3445566666666554432110
Q ss_pred cccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHHHc
Q 009935 346 VSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 425 (522)
Q Consensus 346 ~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~~L 425 (522)
.+. +... .-...+...++.+ +..+.. ...++++..+++ .+...+|||+|++||+|+++++.+++.|
T Consensus 198 ~~~--~~~~----~~~~~~~~~~~~~------~~~~~~-~~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~l 263 (320)
T cd00830 198 SPF--EDAE----GGDPYLVMDGREV------FKFAVR-LMPESIEEALEK-AGLTPDDIDWFVPHQANLRIIEAVAKRL 263 (320)
T ss_pred Ccc--cccc----ccCccEEEcChHH------HHHHHH-hhHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHh
Confidence 000 0000 0000111111111 001111 112333333333 3445689999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheee
Q 009935 426 ELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVW 485 (522)
Q Consensus 426 gl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~ 485 (522)
|++++++ ..++++|||++|+|++++|+++.++|++++||+|++++||+|++|+++++
T Consensus 264 gl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 264 GLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred CCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 9999998 47999999999999999999999999999999999999999999999875
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=7.4e-43 Score=358.79 Aligned_cols=316 Identities=22% Similarity=0.298 Sum_probs=243.2
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHH
Q 009935 107 KVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVM 186 (522)
Q Consensus 107 ~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~ 186 (522)
.++|.++++|+|+ ++++++++.+..+. +++ ++++++|+++|++..+++. ..+| +
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~----~~~l----------a 55 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SDE------WIVTRTGIKERRIAADDET----SSTM----------G 55 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----chH------HeecccCceEEEECCCCCC----HHHH----------H
Confidence 4899999999999 89999999887652 332 3778899999998876653 3444 5
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSY 265 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~ 265 (522)
.+|++++|+++|++|+|||.||+++ ++++..|+.+.+++++||++ ++.+++++ +||++++.||++|.++++++..++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999986 46778899999999999998 68999998 699999999999999999999999
Q ss_pred EEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCcccc
Q 009935 266 ALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVG 345 (522)
Q Consensus 266 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 345 (522)
+|||++|..+. +.++.++.. ..+|||||+|+||++++... + +..+...++++.++.++.+.++...
T Consensus 134 ~Lvv~~e~~~~-~~~~~~~~~---~~~~GDGAaA~lL~~~~~~~-----~---i~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (318)
T TIGR00747 134 VLVVGAEKLSS-TLDWTDRGT---CVLFGDGAGAVVLGESEDPG-----G---IISTHLGADGTQGEALYLPAGGRPT-- 199 (318)
T ss_pred EEEEEehhhcC-cCCcCCCCe---EEEEecceeEEEEeecCCCC-----c---EEEEEEEEcCCCcceEEECCCCcCC--
Confidence 99999999876 334445542 36899999999999876532 2 3344556677766665554321110
Q ss_pred cccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHHHc
Q 009935 346 VSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 425 (522)
Q Consensus 346 ~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~~L 425 (522)
... ...+...++. .+..+... ..++++..+++ .+...+||+||++||+++++++.+++.|
T Consensus 200 --~~~----------~~~~~~~~~~------~~~~~~~~-~~~~~~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~l 259 (318)
T TIGR00747 200 --SGP----------SPFITMEGNE------VFKHAVRK-MGDVVEETLEA-NGLDPEDIDWFVPHQANLRIIEALAKRL 259 (318)
T ss_pred --CCC----------CCceEECCHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHc
Confidence 000 0000011110 01111111 11222322222 2333589999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEE
Q 009935 426 ELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQA 487 (522)
Q Consensus 426 gl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 487 (522)
|++++|+. .++++||||+|+|+++.|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 260 gi~~~k~~---~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 260 ELDMSQVV---KTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred CCCHHHee---ehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 99999994 789999999999999999999999999999999999999999999999987
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.6e-41 Score=347.25 Aligned_cols=316 Identities=21% Similarity=0.300 Sum_probs=241.6
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHH
Q 009935 107 KVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVM 186 (522)
Q Consensus 107 ~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~ 186 (522)
.|+|.++++|+|+ ++++++++.+..+. +++ +|.+++|+++|+++.+++. ..+|+
T Consensus 3 ~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~--------------~~~la 56 (319)
T PRK09352 3 YAKILGTGSYLPE--RVVTNDDLEKMVDT----SDE------WIVTRTGIKERRIAAPDET--------------TSDLA 56 (319)
T ss_pred ceEEEEEEEECCC--eEEcHHHHHHHcCC----CHH------HhhhhcCeEEEEeCCCCCC--------------HHHHH
Confidence 6899999999999 89999999987652 332 4778999999988765542 23455
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSY 265 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~ 265 (522)
.+|++++|+++|++++|||.||++++ ++...|+.+..|+.++|++ ++.+++++ ++|++++.||.+|.+++++|+.++
T Consensus 57 ~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~~~ 134 (319)
T PRK09352 57 TEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAYKN 134 (319)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998864 5677899999999999996 78999998 599999999999999999999999
Q ss_pred EEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCcccc
Q 009935 266 ALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVG 345 (522)
Q Consensus 266 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 345 (522)
|||+++|.++. ++...++.. ..+|||||+|+||++++.. ++ ..++..++++.++.+..+.++...
T Consensus 135 vLvv~~e~~s~-~~~~~~~~~---~~~~gDGaaA~ll~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (319)
T PRK09352 135 VLVIGAEKLSR-IVDWTDRST---CVLFGDGAGAVVLGASEEP------GI---LSTHLGSDGSYGDLLYLPGGGSRG-- 199 (319)
T ss_pred EEEEEehhhcc-ccCcccCCc---eEEEeccceEEEEEEcCCC------Ce---EEEEEEEcCCCCCeEEeCCCCCCC--
Confidence 99999999886 334444432 4699999999999987642 12 233445566655544443321100
Q ss_pred cccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHHHc
Q 009935 346 VSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 425 (522)
Q Consensus 346 ~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~~L 425 (522)
+.+. ..+...+. +.+..+... ..++++..+++ .+...+||+||++|++|+.+++.+++.|
T Consensus 200 -~~~~-----------~~~~~~~~------~~~~~~~~~-~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~l 259 (319)
T PRK09352 200 -PASP-----------GYLRMEGR------EVFKFAVRE-LAKVAREALEA-AGLTPEDIDWLVPHQANLRIIDATAKKL 259 (319)
T ss_pred -CCCC-----------CceEECCH------HHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHh
Confidence 0000 00111110 001111111 12333333333 3334689999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEe
Q 009935 426 ELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQAL 488 (522)
Q Consensus 426 gl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~ 488 (522)
|++.+++ ..++++|||++++|++++|++++++|++++||+|++++||+|++|+++++||.
T Consensus 260 g~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 260 GLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred CCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence 9999998 47899999999999999999999999999999999999999999999999973
No 27
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=1e-41 Score=355.23 Aligned_cols=310 Identities=19% Similarity=0.211 Sum_probs=232.2
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHH
Q 009935 107 KVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVM 186 (522)
Q Consensus 107 ~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~ 186 (522)
.++|.+++.|+|+ ++++++++.+..+. ++++ +.+++||.+|+++++++. ..+|+
T Consensus 2 ~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~~~------i~~~~Gi~~R~~~~~~~~----~~~la---------- 55 (347)
T PRK04262 2 MVGIVGYGAYIPR--YRIKVEEIARVWGD----DPEA------IKRGLGVEEKSVPGPDED----TATIA---------- 55 (347)
T ss_pred ceeEEEEEEeCCC--EEecHHHHHHHhCc----CHHH------HhhccCeeeeecCCCCcC----HHHHH----------
Confidence 5899999999999 99999999988653 5543 788999999999876653 34555
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSY 265 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~ 265 (522)
.+|+++||+++|++|+|||.||++| ++++..|+.+.+|+++||+++++.++|++ +||+|++.||++|.+++++++.++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999886 56788899999999999998678999998 599999999999999999999999
Q ss_pred EEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCC-ccc
Q 009935 266 ALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDT-KRV 344 (522)
Q Consensus 266 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~-g~~ 344 (522)
||||++|.... .+.++. ...|||||+|+||++.+. ..++.+... ..+++ .+.+ ...+.. ...
T Consensus 135 aLVv~~e~~~~---~~~~~~----~~~~GDGA~A~ll~~~~~-----~~~i~~~~~--~~~d~--~d~~-~~~~~~~~~~ 197 (347)
T PRK04262 135 ALAIGADTAQG---APGDAL----EYTAAAGGAAFIIGKEEV-----IAEIEATYS--YTTDT--PDFW-RREGEPYPRH 197 (347)
T ss_pred EEEEEEeeecc---CCCCCC----CCcCCCCcEEEEEecCcc-----cceeecccc--ccccc--hhhc-CCCCCcCCCc
Confidence 99999998422 223332 246899999999997442 133333211 11221 1111 110000 000
Q ss_pred ccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHHH
Q 009935 345 GVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKN 424 (522)
Q Consensus 345 g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~~ 424 (522)
+..++++ + .++.. ..++++..+++ .+...+|||+|++||+|+++++.+++.
T Consensus 198 ~~~~~~~-~--------------------------~~~~~-~~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~~~ 248 (347)
T PRK04262 198 GGRFTGE-P--------------------------AYFKH-IISAAKGLMEK-LGLKPSDYDYAVFHQPNGKFPLRVAKM 248 (347)
T ss_pred Cceecch-H--------------------------HHHHH-HHHHHHHHHHH-hCcCHHHhceeecCCCchHHHHHHHHH
Confidence 0001100 0 00110 11222222222 234468999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEeccCC
Q 009935 425 LELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTIN 492 (522)
Q Consensus 425 Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~ 492 (522)
||++++++..+. ++++||||||||+|++|+++.+ ++++||+|++++||+|+++.+++||+.+...
T Consensus 249 Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 249 LGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred cCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 999999996433 6899999999999999999986 4899999999999999999999999976554
No 28
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=7.5e-41 Score=352.65 Aligned_cols=346 Identities=17% Similarity=0.200 Sum_probs=237.4
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHH
Q 009935 107 KVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVM 186 (522)
Q Consensus 107 ~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~ 186 (522)
+|+|.++|+|+|+ ++++++++.+.++......+ ....+|++++||++|+++.++... +.. ...+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~~--~~~-------~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEGR--PTH-------SNAQMA 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCCC--CCC-------CHHHHH
Confidence 5899999999999 89999999988764321111 122479999999999987543210 011 134667
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSY 265 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~ 265 (522)
.+|+++||+++|++|+|||.||++| ++++..|+.+..|+++||++ ++.+++++ ++|+|++.||++|.+++++++.++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999986 56788999999999999998 58899998 599999999999999999999999
Q ss_pred EEEEEecccccccccCCC------------c--cc----cccccccccceEEEEEecCCCccccccceeeeEEEEEecCC
Q 009935 266 ALVVSMENITLNWYFGND------------R--SM----LVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGAD 327 (522)
Q Consensus 266 aLVVs~E~~s~~~~~~~d------------r--~~----l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d 327 (522)
||||++|.+|..+ ++.+ + .. -..+++|||||+|+||++.+... ...+ ++...+..+.
T Consensus 146 vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~ 220 (378)
T PRK06816 146 AVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSY 220 (378)
T ss_pred EEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeecc
Confidence 9999999998743 2111 1 00 01135799999999999866421 1111 1111122222
Q ss_pred CCccc-eeeeccCC--Cc-ccccc-cchhhHHHHHH-hhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccc
Q 009935 328 DKCYN-CVFQREDD--TK-RVGVS-LSKDLMAVAGE-ALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDF 401 (522)
Q Consensus 328 ~~~~~-~~~~~~d~--~g-~~g~~-ls~d~~~v~g~-~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~ 401 (522)
...++ |+....+. ++ ..+.. ...+-+...+. .++.+.. .+ .+ ++.. ...++++..+++ .+..
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~---~~~~-~~~~~i~~~L~~-~gl~ 288 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVR----LL---NE---NIVV-YTIKPLLELVDK-RNLD 288 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHH----HH---HH---HhHH-HHHHHHHHHHHH-cCCC
Confidence 22222 22111000 00 00000 01110000000 0110100 00 00 0100 111222223332 3445
Q ss_pred cccccEEEEcCCChHHHHHHHHHc-----CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeCh
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNL-----ELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGS 476 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~L-----gl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGs 476 (522)
.+|||+|++||+|.++++.+.+.| |++++|+ ..++++||||+|||+|++|++++++|++++||+|++++.|+
T Consensus 289 ~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 289 PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEecc
Confidence 689999999999999999999987 8999998 58999999999999999999999999999999999998887
Q ss_pred h-HhhhheeeEEe
Q 009935 477 G-FKCNSAVWQAL 488 (522)
Q Consensus 477 G-~~~~s~v~r~~ 488 (522)
| +.++.++++|.
T Consensus 366 ~~~~~~~~~~~~~ 378 (378)
T PRK06816 366 GRFSTAFMLLTVV 378 (378)
T ss_pred cchhheeEEEEEC
Confidence 6 99999999884
No 29
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=3.8e-41 Score=350.82 Aligned_cols=320 Identities=17% Similarity=0.182 Sum_probs=234.5
Q ss_pred eEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHHH
Q 009935 108 VYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMF 187 (522)
Q Consensus 108 v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~~ 187 (522)
+.|.++|+|+|+ ++++++++.+..+. ++++ +.+++||++|+++++++. ..+|+ .
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~~------i~~~~Gi~~r~v~~~~~~----~~~la----------~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPES------ISNGLPVEEKAVPGLDED----TATIG----------V 55 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHhH------eeeccceeeeecCCCCCC----HHHHH----------H
Confidence 679999999999 89999999887652 5554 677899999999977653 35555 9
Q ss_pred HHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeE
Q 009935 188 GAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYA 266 (522)
Q Consensus 188 ~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~a 266 (522)
+|+++||+++|++|+|||.||++| ++++..|+.+..|+++||+++++.++|+++ ||+|++.||++|.++++++..++|
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~-aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEF-ACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999886 567788999999999999987899999995 999999999999999999999999
Q ss_pred EEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCccccc
Q 009935 267 LVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGV 346 (522)
Q Consensus 267 LVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~ 346 (522)
|||++|..+.. +.++. ...|||||+|+||++.+.. .++.+.. ...+++. +. +...+ ...
T Consensus 135 LVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~--~~-~~~~~----~~~ 193 (345)
T TIGR00748 135 LAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTP--DF-WRREG----EPY 193 (345)
T ss_pred EEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceecccc--cc-cccCC----CcC
Confidence 99999998642 23332 2578999999999965421 1222211 1112211 00 00000 000
Q ss_pred ccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHHHcC
Q 009935 347 SLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLE 426 (522)
Q Consensus 347 ~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~~Lg 426 (522)
+...++ . .+ ..+-+.++.. ..+++++ + .+...+|||+|++||+|.++++.+.+.||
T Consensus 194 ------~~~~~~-----~--~~-----~~~~~~~~~~-~~~~~L~----~-~gl~~~did~~i~Hq~~~~~~~~~~~~lg 249 (345)
T TIGR00748 194 ------PRHGGR-----F--TG-----EPAYFHHVVT-AAKGLME----K-LGLTPEDFDYAVFHQPNGKFYLVAARMLG 249 (345)
T ss_pred ------CCcCCe-----e--cC-----hHHHHHHHHH-HHHHHHH----H-cCCCHHHcCEEEeCCCChHHHHHHHHHcC
Confidence 000000 0 00 0001111111 1123333 2 33446899999999999999999999999
Q ss_pred CCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEeccCCCCCCCCCcccccc
Q 009935 427 LSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIH 505 (522)
Q Consensus 427 l~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~~~~~~~~w~~~~~ 505 (522)
++++++..+ .++++||||+|+|+|+.|+++++ ++++||+|++++||+|++|++++|+|.+..... .+|+-.|+
T Consensus 250 l~~ek~~~~-~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~~---~~~~~~~~ 322 (345)
T TIGR00748 250 FPKEQVKPG-LLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEEK---RDLAPKVA 322 (345)
T ss_pred CCHHHeecc-ccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHHH---hhhhhhHH
Confidence 999998521 13489999999999999999886 689999999999999999999999998665532 36864443
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.8e-39 Score=341.36 Aligned_cols=346 Identities=16% Similarity=0.182 Sum_probs=234.9
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHhhhcc-CCChhh---H----------HHHHHHHHHhCCccEEeecCCc----cC
Q 009935 107 KVYLVDFACYKPEPERQCTREIFMERSEQIG-CFSEEN---L----------AFQKKILERSGLGQHTYFPEAV----LR 168 (522)
Q Consensus 107 ~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~-~~~~e~---~----------~f~~ki~~~sGi~er~~~~~~~----~~ 168 (522)
+|+|+++|+|+|+ ++++|+++.++++... .+.++. + ...++|++++||++|++..+.. ..
T Consensus 2 ~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~ 79 (372)
T PRK07515 2 NVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDR 79 (372)
T ss_pred CcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccc
Confidence 6899999999999 8999999998753211 010000 0 0024588899999999985321 00
Q ss_pred CCCCc--cHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCch
Q 009935 169 VPPNP--CMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCS 245 (522)
Q Consensus 169 ~~~~~--~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCs 245 (522)
.++.. ........+.+|+.+|+++||+++|++++|||.||++|+ +++..|+.+.+|+++||++ ..+++++ ++|+
T Consensus 80 ~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aCa 156 (372)
T PRK07515 80 MRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VACS 156 (372)
T ss_pred cCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chhH
Confidence 00000 000111235679999999999999999999999999874 6788999999999999996 6789998 6999
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEec
Q 009935 246 AGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKG 325 (522)
Q Consensus 246 ggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~ 325 (522)
+++.||.+|.++|+++..++||||++|.++.. ....|+. +..+|||||+|+||++.+....+..+++++.. ..
T Consensus 157 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-~~~~d~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~---~~ 229 (372)
T PRK07515 157 SATFGIQTAANAIRSGSARRVLVVNPEICSGH-LNFRDRD---SHFIFGDVATAVIVERADTATSAGGFEILGTR---LF 229 (372)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeeccccc-ccccCCC---CCEEecCccEEEEEeeccccccCCCceEEEEE---ee
Confidence 99999999999999999999999999998863 3345554 24799999999999986543222345554432 22
Q ss_pred CCCCccceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccc
Q 009935 326 ADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAF 405 (522)
Q Consensus 326 ~d~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~di 405 (522)
++ ..+.+..+. | .+.....+-+... ..++..-|+. .++++... ..++++..+++ .+...+||
T Consensus 230 ~~--~~~~~~~~~---G-~~~~~~~~~~~~~----~~~~~~~g~~------~~~~~~~~-~~~~i~~~L~~-~gl~~~dI 291 (372)
T PRK07515 230 TQ--FSNNIRNNF---G-FLNRADPEGIGAR----DKLFVQEGRK------VFKEVCPM-VAEHIVEHLAE-NGLTPADV 291 (372)
T ss_pred cc--cccceecCC---C-CCCCCCccccccc----cceEEeccHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHHC
Confidence 21 111111110 1 0000000000000 0001111111 11111111 12333333433 34456899
Q ss_pred cEEEEcCCChHHHHHHHHH-cCCC--cccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhh
Q 009935 406 EHFCIHAGGRAVLDELEKN-LELS--EWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNS 482 (522)
Q Consensus 406 d~f~~H~~g~~vl~~i~~~-Lgl~--~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s 482 (522)
|+|++||+|.++++.+.+. ||++ +++. +.++++||||+|+|+++.|+++. +++++||+|++++||+|++|++
T Consensus 292 d~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~~ 366 (372)
T PRK07515 292 KRFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIGS 366 (372)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHHH
Confidence 9999999999999999988 5654 4444 68999999999999999999874 5789999999999999999999
Q ss_pred eeeEE
Q 009935 483 AVWQA 487 (522)
Q Consensus 483 ~v~r~ 487 (522)
+++|.
T Consensus 367 ~ll~~ 371 (372)
T PRK07515 367 VIVRK 371 (372)
T ss_pred HHhcc
Confidence 99874
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=9.1e-39 Score=328.46 Aligned_cols=321 Identities=21% Similarity=0.252 Sum_probs=233.4
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHH
Q 009935 107 KVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVM 186 (522)
Q Consensus 107 ~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~ 186 (522)
.|+|.++++|+|+ ++++++++.+..+. . ++..++|+++|++..+++. ..+ |+
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~~----~~~----------l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDED----VPT----------MA 52 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCCC----HHH----------HH
Confidence 3789999999999 89999999887652 1 2667899999999865432 244 45
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSY 265 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~ 265 (522)
.+|++++|+++|++++|||.||++++ ++...|+.+.+|++++|++ ++.+++++ +||++++.||.+|.++|+++..++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999864 5566889999999999998 89999999 599999999999999999999999
Q ss_pred EEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCcccc
Q 009935 266 ALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVG 345 (522)
Q Consensus 266 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 345 (522)
+|||++|.++.... ...+ ..++|||||+|+||++.+.. ..+++. .++..+++..+++....-+ +...
T Consensus 131 vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~---~~~~i~---~~~~~~~~~~~~~~~~~~~--~~~~ 197 (324)
T cd00827 131 ALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGI---LAAGIV---STHSTSDPGYDFSPYPVMD--GGYP 197 (324)
T ss_pred EEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCccc---ccCCce---eeeeecccccccCccceec--cCCC
Confidence 99999999887432 1222 35899999999999987642 123343 3444555544320000000 0000
Q ss_pred cccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCCh-HHHHHHHHH
Q 009935 346 VSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGR-AVLDELEKN 424 (522)
Q Consensus 346 ~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~-~vl~~i~~~ 424 (522)
.... ......+..+... . +-....... ..++++..+++ .+.. +||++|++||+|+ .+++.+++.
T Consensus 198 ~~~~----~~~~~~~~~~~~~--~------~~~~~~~~~-~~~~~~~~l~~-~~~~-~~i~~~~~h~~~~~~~~~~~~~~ 262 (324)
T cd00827 198 KPCK----LAYAIRLTAEPAG--R------AVFEAAHKL-IAKVVRKALDR-AGLS-EDIDYFVPHQPNGKKILEAVAKK 262 (324)
T ss_pred cchh----hhhhcceeecCCc--c------chHHHHhHH-HHHHHHHHHHH-cccc-cccceeeccCchHHHHHHHHHHH
Confidence 0000 0000001000000 0 001111111 12333333332 2222 7899999999999 999999999
Q ss_pred cCCCccccccccc-ccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheee
Q 009935 425 LELSEWHMEPSRM-TLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVW 485 (522)
Q Consensus 425 Lgl~~e~~~~S~~-tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~ 485 (522)
|+++++++..++. ++++||||+|+|+++.|+++++++++++||+|++++||+|++|+++++
T Consensus 263 l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 263 LGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred ccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 9999999976554 899999999999999999999999999999999999999999998864
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=5.7e-35 Score=307.95 Aligned_cols=307 Identities=16% Similarity=0.147 Sum_probs=221.4
Q ss_pred eEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHHH
Q 009935 108 VYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMF 187 (522)
Q Consensus 108 v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~~ 187 (522)
|+|.+++.|+|+ ++++++++.+..+. +++ ++....|++++++.++++. ..+|+ .
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~~------~~~~g~G~~~~~~~~~~ed----~~~la----------~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DPE------KFHIGIGQKKMAVPPIDED----IVTMA----------A 54 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CHH------HHHhhcCceEEeeCCCCCC----HHHHH----------H
Confidence 579999999999 99999999987652 554 3667899999988877652 34565 9
Q ss_pred HHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeE
Q 009935 188 GAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYA 266 (522)
Q Consensus 188 ~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~a 266 (522)
+|++++|+++ +|+|||.||++| ++++..|+.+..|+++||+++++.++|+. ++|+|++.||++|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999986 67788899999999999998889999999 5999999999999999999999999
Q ss_pred EEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEE-EEEecCCCCccceeeeccCCCcccc
Q 009935 267 LVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTV-RTHKGADDKCYNCVFQREDDTKRVG 345 (522)
Q Consensus 267 LVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v-~t~~~~d~~~~~~~~~~~d~~g~~g 345 (522)
|||++|+... ...+. ...+|||||+|+||++.+. +..+. .+...+++. ++ .+++...
T Consensus 132 LVv~~D~a~~---~~~~~----~~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~d-f~~p~~~----- 189 (379)
T TIGR01835 132 LVIASDIAKY---GLESP----GEPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MD-FWRPNYS----- 189 (379)
T ss_pred EEEEeehhhc---ccCCC----CCccccCccEEEEEecCCC--------eeEEeccceeeecCC-CC-ccCCCCC-----
Confidence 9999998532 11111 1368999999999987542 11111 111122221 11 1122110
Q ss_pred cccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHH----HHHH
Q 009935 346 VSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAV----LDEL 421 (522)
Q Consensus 346 ~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~v----l~~i 421 (522)
+.+.+.++ .....|+.. ..++++..+++ .+...+|||+||+||++.++ ++.+
T Consensus 190 -----~~~~v~g~-----------------~s~~~y~~~-~~~~~~~~l~~-~g~~~~did~~i~H~p~~~~~~k~~~~~ 245 (379)
T TIGR01835 190 -----TTALVDGQ-----------------YSNEQYLNA-FENAWNDYAKR-TGLSLADFAAFCFHVPFTKMGLKALRHI 245 (379)
T ss_pred -----CceeECcH-----------------HHHHHHHHH-HHHHHHHHHHH-hCCCHHHcCEEEECCCCCcHHHHHHHHH
Confidence 01111111 011122221 12333333332 34456899999999997776 3445
Q ss_pred HHHcCCCc-c----cccccccccccccccccchHHHHHHHHHHcC-CCCCCCEEEEEEeChhHhhhheeeEEec
Q 009935 422 EKNLELSE-W----HMEPSRMTLYRFGNTSSSSLWYELAYSEAKG-RMRKGDRTWQIAFGSGFKCNSAVWQALR 489 (522)
Q Consensus 422 ~~~Lgl~~-e----~~~~S~~tl~r~GNtsSasi~~~La~~~~~g-~l~~Gd~VlliafGsG~~~~s~v~r~~~ 489 (522)
.+.++++. + .+++|+.+++++|||+|+|+++.|+.+++.+ ++++||+|++++||+|+.......+..+
T Consensus 246 l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~ 319 (379)
T TIGR01835 246 LKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA 319 (379)
T ss_pred HhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc
Confidence 66677773 2 3335567899999999999999999999885 8999999999999999887777666643
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=3.1e-33 Score=298.47 Aligned_cols=311 Identities=17% Similarity=0.239 Sum_probs=219.9
Q ss_pred CCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEee--cCCccCCCCCccHHHHHHH
Q 009935 104 RPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYF--PEAVLRVPPNPCMAEARNE 181 (522)
Q Consensus 104 ~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~--~~~~~~~~~~~~ma~~~~e 181 (522)
+|.+|.|.++|.|+|+ ++|+++++.++.+. +++| + ++||++|+++ +++|. ..+|+
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~~------~--~~GI~~r~~ava~~~Ed----~~tmA----- 57 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SKGK------Y--TIGLGQDCMAFCTDVED----VISMS----- 57 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHHH------H--hhccceeEeccCCCCCC----HHHHH-----
Confidence 4788999999999999 89999999988663 6665 3 5899999874 44442 45666
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHH---HHcCCCCCeeEEEecCCCchHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIV---NHYKLRGNITSYNLGGMGCSAGLISIDLAKQL 257 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~---~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~l 257 (522)
++|++++|+++|++|++||+||++| |+++..|+++..|+ ++||.+ ++.+||+++ +|+||+.||++|.++
T Consensus 58 -----~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~~-AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 58 -----LTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDSTN-ACYGGTAALLNCVNW 130 (459)
T ss_pred -----HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehhh-hhHHHHHHHHHHHHH
Confidence 9999999999999999999999997 67788999999886 688876 899999995 999999999999999
Q ss_pred HHcCC--CCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCC-cccee
Q 009935 258 LQVHP--NSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDK-CYNCV 334 (522)
Q Consensus 258 L~~~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~-~~~~~ 334 (522)
++++. .++||||++|+.+... . ..+ ..+||||+|+||+..+. ..+... ..++... .++ .
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~~-~-~~e------~t~GdGA~A~lv~~~~~------~~l~~~---~~g~~~~~~~D-f 192 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYAE-G-PAR------PTGGAGAVAMLVGPNAP------IVFESK---YRGSHMAHVYD-F 192 (459)
T ss_pred HHcCCCCCCeEEEEEechhhccC-C-CCC------CCCCcceEEEEEccCCC------ceeecc---cccccCcccch-h
Confidence 99986 5999999999966421 1 122 35699999999986442 111111 1111111 122 2
Q ss_pred eeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccc-----cccccccccEEE
Q 009935 335 FQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPY-----IPDFKLAFEHFC 409 (522)
Q Consensus 335 ~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~-----~~~~~~did~f~ 409 (522)
+.+... .+.|.+. |+. .+.+|+..+ .++++...++. .+...+|||+||
T Consensus 193 ~rP~~~---------~~~~~vd-----------G~~------s~~~yl~~~-~~~~~~~~~k~~~~~~~g~~~~d~d~~v 245 (459)
T PLN02577 193 YKPDLA---------SEYPVVD-----------GKL------SQTCYLMAL-DSCYKRFCEKYEKLEGKQFSISDADYFV 245 (459)
T ss_pred cccCCC---------CCceEEc-----------chH------HHHHHHHHH-HHHHHHHHHHhhcccccCCCHHHcCEEE
Confidence 232210 0011111 111 122333221 12222211110 134568999999
Q ss_pred EcCCChHHHHHHHHHcCCC----------------------------------------------ccccccccccccccc
Q 009935 410 IHAGGRAVLDELEKNLELS----------------------------------------------EWHMEPSRMTLYRFG 443 (522)
Q Consensus 410 ~H~~g~~vl~~i~~~Lgl~----------------------------------------------~e~~~~S~~tl~r~G 443 (522)
+||+..++.....+.|.+. .+|++||...-++.|
T Consensus 246 fHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vG 325 (459)
T PLN02577 246 FHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVG 325 (459)
T ss_pred ecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcC
Confidence 9999777776655444311 157777777888999
Q ss_pred ccccchHHHHHHHHHHcCC-CCCCCEEEEEEeChhHhhhheeeEEec
Q 009935 444 NTSSSSLWYELAYSEAKGR-MRKGDRTWQIAFGSGFKCNSAVWQALR 489 (522)
Q Consensus 444 NtsSasi~~~La~~~~~g~-l~~Gd~VlliafGsG~~~~s~v~r~~~ 489 (522)
|+.++|++..|.-+++... ..+|+||.++++|||........+...
T Consensus 326 N~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 326 NMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred cccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeC
Confidence 9999999999999887542 459999999999999887777776654
No 34
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.97 E-value=1.6e-31 Score=260.10 Aligned_cols=203 Identities=24% Similarity=0.305 Sum_probs=162.4
Q ss_pred hcCCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCCh--hhHHHHHHHHHHhCCccEEeecCCccC-------CCCC
Q 009935 102 MSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSE--ENLAFQKKILERSGLGQHTYFPEAVLR-------VPPN 172 (522)
Q Consensus 102 ~~~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~--e~~~f~~ki~~~sGi~er~~~~~~~~~-------~~~~ 172 (522)
.+.+.+.+|+++|+..|+ ++++++++.+.+.+....+. +..+++++|++++||+.|+..-+.++. ....
T Consensus 9 ~~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 456788999999999999 99999999987533222222 445678999999999999876432211 0111
Q ss_pred ----ccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHH
Q 009935 173 ----PCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGL 248 (522)
Q Consensus 173 ----~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl 248 (522)
..|+.+.+++.+|+.+|++++|+++|++++|||+||+.|+++...|++..+|+++|||++++..+.|++|||+||+
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 2356789999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEecccccccccCC--CccccccccccccceEEEEEecCC
Q 009935 249 ISIDLAKQLLQVHPNSYALVVSMENITLNWYFGN--DRSMLVSNCLFRMGGAAILLSNRS 306 (522)
Q Consensus 249 ~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~--dr~~l~~~~lfgDGAAAvLLs~~~ 306 (522)
.+|.+|+++.+++|..+||||+.|.+|.+|..++ +++.+++++||||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999999999999999999998776443 467889999999999999998754
No 35
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.97 E-value=5.3e-31 Score=270.27 Aligned_cols=313 Identities=19% Similarity=0.195 Sum_probs=236.5
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHH
Q 009935 107 KVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVM 186 (522)
Q Consensus 107 ~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~ 186 (522)
.+.|++++.|.|. ++|+.+++.+..+. +++ |+...+|++++.+.+.+|. ..+|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~ED----~vTma---------- 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWDED----AVTMA---------- 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----ChH------HhhhccccccccCCCCchh----HHHHH----------
Confidence 5789999999999 99999999987552 343 5778899999999888763 45666
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSY 265 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~ 265 (522)
++|++++|.+.+++|++|++|+++| |..+...+.+..|++.||+.+++.++|+.. +|-++..||+.|.+++.+++.++
T Consensus 56 veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~~ 134 (377)
T COG3425 56 VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMISY 134 (377)
T ss_pred HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999999998 667888999999999999999999999995 99999999999999999999999
Q ss_pred EEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCcccc
Q 009935 266 ALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVG 345 (522)
Q Consensus 266 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 345 (522)
+|||++|+.-. ...+.. -...|+||+|+|++..+... ..+.... + .+++. ++ .|++++.
T Consensus 135 ~LvI~sD~a~~---~~~~~~----E~t~GAGavA~lIg~n~~~~----a~~~~~~-s--yt~d~-~D-FwRp~~~----- 193 (377)
T COG3425 135 GLVIGADTAQY---APGDAL----EYTAGAGAVAFLIGKNPPIV----AEFEGTG-S--YTTDT-PD-FWRPDGQ----- 193 (377)
T ss_pred eEEEeehhhcc---CCCccc----CccCCCceEEEEEccCCCeE----EEecCce-E--EecCC-Cc-ccccCCC-----
Confidence 99999998532 222222 25789999999999853321 1111111 1 11111 11 2333321
Q ss_pred cccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHHHc
Q 009935 346 VSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 425 (522)
Q Consensus 346 ~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~~L 425 (522)
..|.+.|+. ++ ..|+..+ ...++.-.++ .+...+|||++|+|+++.++-....+.+
T Consensus 194 -----~yp~~dg~~---------------s~--~~Y~~~~-~~a~~~~~~k-~gls~~dfdy~vfH~P~~k~~~ka~k~l 249 (377)
T COG3425 194 -----PYPYVDGRF---------------SE--PAYFKHV-ENAAKGYMEK-TGLSPDDFDYIVFHQPNGKFPKKAAKSL 249 (377)
T ss_pred -----cccccCcee---------------cH--HHHHHHH-HHHHHHHHHH-hCCChhhhCeEEecCCCCchHHHHHHHh
Confidence 112222210 10 0122111 1122211111 2333689999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhheeeEEeccCC
Q 009935 426 ELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTIN 492 (522)
Q Consensus 426 gl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~ 492 (522)
+...+++.++....++.||+.|+|+++.|+.+++..+ .+||||++.+||||......-.+....+.
T Consensus 250 ~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 250 GFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred CccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 9999999999999999999999999999999998766 79999999999999776666666655543
No 36
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.97 E-value=1.7e-30 Score=277.13 Aligned_cols=316 Identities=16% Similarity=0.218 Sum_probs=213.9
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEE--eecCCccCCCCCccHHHHHHHHHH
Q 009935 107 KVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHT--YFPEAVLRVPPNPCMAEARNEAEM 184 (522)
Q Consensus 107 ~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~--~~~~~~~~~~~~~~ma~~~~ea~~ 184 (522)
+|+|.+++.|+|+ ++|+++++.++.+. ++++ + ++||++|+ +.++++. ..+|+
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~k------~--~~GI~~rr~av~~~~Ed----~~tma-------- 54 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAGK------Y--TIGLGQTKMGFCTDRED----INSLC-------- 54 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHHH------h--eechhheecccCCCCCC----HHHHH--------
Confidence 5899999999999 89999999887653 4443 3 59999998 4555542 45565
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHc---CCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 185 VMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHY---KLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 185 l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~L---Gl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.+|++++|++++++|++||+||++| |+++..|+.+..|++.| |.+ ++.+||+++ +|+|++.||.+|.+++++
T Consensus 55 --~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~~-AC~G~t~AL~~A~~~i~s 130 (454)
T TIGR01833 55 --LTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTTN-ACYGGTAALFNAINWIES 130 (454)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEeccc-cchhHHHHHHHHHHHHHc
Confidence 9999999999999999999999997 78899999999999955 455 899999995 999999999999999998
Q ss_pred CC--CCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeecc
Q 009935 261 HP--NSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQRE 338 (522)
Q Consensus 261 ~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~ 338 (522)
+. .++||||++|+.- |. +.+. ..++||||+|+||+..+.- .++. ++..+++....++|+ +.
T Consensus 131 ~~~~~~~aLVV~sDia~---y~--~~~~---~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF~r----P~ 193 (454)
T TIGR01833 131 SSWDGRYALVVAGDIAV---YA--KGNA---RPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDFYK----PD 193 (454)
T ss_pred CCcCCCeEEEEEecccc---cc--CCCe---eeccccceEEEEeccCccc----eecC-ccceEEEeecccccC----CC
Confidence 85 6999999999932 22 2221 2578999999999876541 0111 011122222222332 21
Q ss_pred CCCcccccccchhhHHHHHHh-hhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccc---cccccccccEEEEcCCC
Q 009935 339 DDTKRVGVSLSKDLMAVAGEA-LKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPY---IPDFKLAFEHFCIHAGG 414 (522)
Q Consensus 339 d~~g~~g~~ls~d~~~v~g~~-l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~---~~~~~~did~f~~H~~g 414 (522)
. ..+.|.+.|+. +...++. +.+-+..| .++ ...+++.. .+...+|||++|+|++.
T Consensus 194 ~---------~~~~p~vdg~~S~~~Yl~a-------~~~~y~~y----~~~-~~~a~~~~~~~~~~~~~dfd~~~fH~P~ 252 (454)
T TIGR01833 194 L---------ASEYPVVDGKLSIQCYLSA-------LDRCYKSY----CKK-IEKQWGKSGGDRKFTLNDFDYMVFHSPY 252 (454)
T ss_pred C---------CCcccccCCccCHHHHHHH-------HHHHHHHH----HHH-HHHhhhhhccccCCCHhHcCEEeccCCc
Confidence 1 00112222210 0000000 00001111 111 11111110 12335899999999997
Q ss_pred hHHHHHH-HHHc---------------------------------------------CCCcccccccccccccccccccc
Q 009935 415 RAVLDEL-EKNL---------------------------------------------ELSEWHMEPSRMTLYRFGNTSSS 448 (522)
Q Consensus 415 ~~vl~~i-~~~L---------------------------------------------gl~~e~~~~S~~tl~r~GNtsSa 448 (522)
.++.... .+.+ +...++++||...-++.||+.++
T Consensus 253 ~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~Yta 332 (454)
T TIGR01833 253 CKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTA 332 (454)
T ss_pred ccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhh
Confidence 6665553 3222 11126777777777899999999
Q ss_pred hHHHHHHHHHHcCC--CCCCCEEEEEEeChhHhhhheeeEEecc
Q 009935 449 SLWYELAYSEAKGR--MRKGDRTWQIAFGSGFKCNSAVWQALRT 490 (522)
Q Consensus 449 si~~~La~~~~~g~--l~~Gd~VlliafGsG~~~~s~v~r~~~~ 490 (522)
|+++.|.-+++..+ ...|+||.|+++|||........+....
T Consensus 333 Slyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 333 SLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 99999999997543 4579999999999998877777766644
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=4.5e-28 Score=240.10 Aligned_cols=238 Identities=19% Similarity=0.169 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +.++++++ .+|++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 4567799999999999999999999999974 6666899999999999998 79999999 5999999999999999999
Q ss_pred CCCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCC
Q 009935 261 HPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDD 340 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~ 340 (522)
+..+++||+++|. ++|||||+|+||++.+....+....+..+.......++..+.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-------- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-------- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC--------
Confidence 9999999999998 589999999999986542211111111112111111211100
Q ss_pred CcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHH
Q 009935 341 TKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE 420 (522)
Q Consensus 341 ~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~ 420 (522)
..... +.. ....+++++. .+...+|+|+|++|+.+..+++.
T Consensus 140 -----~~~~~-------------------------~~~----~~~i~~~l~~-----ag~~~~did~~~~h~~~~~~~~~ 180 (254)
T cd00327 140 -----PAVSG-------------------------EGL----ARAARKALEG-----AGLTPSDIDYVEAHGTGTPIGDA 180 (254)
T ss_pred -----CCCCh-------------------------HHH----HHHHHHHHHH-----cCCCHHHCCEEEccCCcCccccH
Confidence 00000 000 0111233332 23335899999999999999999
Q ss_pred HHHHcCCCccccc--ccccccccccccccchHHHHHHHHHHcCCCC-------CCCEEEEEEeChhHhhhheee
Q 009935 421 LEKNLELSEWHME--PSRMTLYRFGNTSSSSLWYELAYSEAKGRMR-------KGDRTWQIAFGSGFKCNSAVW 485 (522)
Q Consensus 421 i~~~Lgl~~e~~~--~S~~tl~r~GNtsSasi~~~La~~~~~g~l~-------~Gd~VlliafGsG~~~~s~v~ 485 (522)
+++.++++.++.. +...+..+|||++++|.++.|.++....+.+ +||++++.++|.|++++++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 181 VELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred HHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 9999999887764 4467889999999999999999998876665 899999999999999998875
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.92 E-value=4.9e-25 Score=226.97 Aligned_cols=252 Identities=18% Similarity=0.176 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHHHhcCCC----CCCcCEEEEeecC-CCC---------------------CccHHHHHHHHcCCCCCee
Q 009935 182 AEMVMFGAIDELLSKTGVK----AKDIGILVVNCSL-FCP---------------------TPSLSAMIVNHYKLRGNIT 235 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~----p~dID~LI~~~s~-~~~---------------------~Ps~a~~I~~~LGl~~~~~ 235 (522)
..+|+..|++++|+++|++ +++||.||++++. .+. .|+.+.+|++.||++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 3456799999999999999 9999999998653 333 788999999999994 78
Q ss_pred EEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccccccC----------C--Cc--cccccccccccceEEEE
Q 009935 236 SYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFG----------N--DR--SMLVSNCLFRMGGAAIL 301 (522)
Q Consensus 236 ~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~----------~--dr--~~l~~~~lfgDGAAAvL 301 (522)
+++++ +||++++.||++|.++|+++..+++||+++|..+..+... . .+ +.....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 89999 5999999999999999999999999999999876532210 0 00 11224689999999999
Q ss_pred EecCCCcccc---ccceeeeEEEEEecCCCCccceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhH
Q 009935 302 LSNRSSDRRR---SKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQL 378 (522)
Q Consensus 302 Ls~~~~~~~~---a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~ 378 (522)
|++.+....+ ...++.+. ....++..... .. |..+.+
T Consensus 168 L~~~~~a~~~~~~~~~~i~~~---~~~~~~~~~~~--------------~~-----------------------~~~~~~ 207 (332)
T cd00825 168 VEELEHALARGAHIYAEIVGT---AATIDGAGMGA--------------FA-----------------------PSAEGL 207 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEEE---EEccCCCCCCC--------------CC-----------------------cCHHHH
Confidence 9876542111 11222221 11222211000 00 000000
Q ss_pred HHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHHHHcCCCcccc--cccccccccccccccchHHHHHHH
Q 009935 379 LFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHM--EPSRMTLYRFGNTSSSSLWYELAY 456 (522)
Q Consensus 379 ~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~--~~S~~tl~r~GNtsSasi~~~La~ 456 (522)
....+++++. .+...+|||++++|+.|..+.+.+++.++++.++. .+...+..+|||++++|.++.|..
T Consensus 208 ----~~~i~~al~~-----agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~ 278 (332)
T cd00825 208 ----ARAAKEALAV-----AGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDE 278 (332)
T ss_pred ----HHHHHHHHHH-----cCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHH
Confidence 0011233332 33345899999999999999999999888876642 233678899999999999999999
Q ss_pred HHHcCCCC-------------------------CCCEEEEEEeChhHhhhheee
Q 009935 457 SEAKGRMR-------------------------KGDRTWQIAFGSGFKCNSAVW 485 (522)
Q Consensus 457 ~~~~g~l~-------------------------~Gd~VlliafGsG~~~~s~v~ 485 (522)
+...++.+ +|+++++++||.|.+++++|+
T Consensus 279 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 279 AVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 88766655 899999999999999998875
No 39
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.78 E-value=1.5e-18 Score=161.77 Aligned_cols=168 Identities=21% Similarity=0.233 Sum_probs=125.8
Q ss_pred CCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHH
Q 009935 104 RPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAE 183 (522)
Q Consensus 104 ~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~ 183 (522)
||++|.|.+++.|.|. ++++.+++.++-+. +++ |+....|.++..+.++.|. ..+|+
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~ED----~vTmA------- 57 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPDED----IVTMA------- 57 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TTS-----HHHHH-------
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCccc----HHHHH-------
Confidence 7999999999999999 99999999887553 343 3444455556677776652 45666
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCC--CCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKL--RGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl--~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
..|++++|++.+++|++|+.|+++| |......+.+.+|++.||+ ..+++.+|+.+ +|.||..||+.|.+++++
T Consensus 58 ---~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~-ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 58 ---ANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQ-ACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp ---HHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEES-GGGHHHHHHHHHHHHHCS
T ss_pred ---HHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhh-hhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998 5566788999999999999 55789999994 999999999999999999
Q ss_pred CC--CCeEEEEEecccccccccCCCccccccccccccceEEEEEecCC
Q 009935 261 HP--NSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRS 306 (522)
Q Consensus 261 ~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~ 306 (522)
++ .+++|||++|+.. |...+ . -..-|-||+|+|++...
T Consensus 134 ~~~~g~~aLVVasDiA~---y~~g~-~----e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 134 SPWDGRKALVVASDIAR---YDLGS-A----EPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp TTSTTEEEEEEEEEEE-----STTT-T----GGG-EEEEEEEEEECS-
T ss_pred CCCCCCeEEEEeccccc---cCCCC-c----cccccceeEEEEecCCC
Confidence 74 6899999999953 22222 1 25679999999998753
No 40
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.78 E-value=2.9e-19 Score=150.56 Aligned_cols=84 Identities=31% Similarity=0.498 Sum_probs=75.1
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhh
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKC 480 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~ 480 (522)
..+|||+|++||.+.++++.+.+.+|++++++ ..++++||||+|+|+|++|+++.++|++++||+|+++++|+|++|
T Consensus 7 ~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~ 83 (90)
T PF08541_consen 7 SPDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSW 83 (90)
T ss_dssp -GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEE
T ss_pred CHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhhee
Confidence 35899999999999999999999999999998 579999999999999999999999999999999999999999999
Q ss_pred hheeeEE
Q 009935 481 NSAVWQA 487 (522)
Q Consensus 481 ~s~v~r~ 487 (522)
++++|||
T Consensus 84 ~~~~~~~ 90 (90)
T PF08541_consen 84 GAAVLRW 90 (90)
T ss_dssp EEEEEE-
T ss_pred EEEEEEC
Confidence 9999997
No 41
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.77 E-value=1.2e-18 Score=160.75 Aligned_cols=119 Identities=23% Similarity=0.389 Sum_probs=90.2
Q ss_pred ccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHHHH
Q 009935 343 RVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELE 422 (522)
Q Consensus 343 ~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~i~ 422 (522)
++.+.|++++|.+.++.++..+ +++++.. +....++.+|++|+||++|++.++
T Consensus 25 Gf~~~Ls~~vP~~i~~~i~~~~----------------------~~~L~~~-----g~~~~~~~~wavHPGG~~ILd~v~ 77 (151)
T PF02797_consen 25 GFHFILSKEVPDLISDNIPPFV----------------------EDLLARH-----GLSDWDILFWAVHPGGRKILDAVE 77 (151)
T ss_dssp EEEEEE-TTHHHHHHHHHHHHH----------------------HHHHHGG-----TCCSGGGSEEEEE-SSHHHHHHHH
T ss_pred eEEEEEhhHhHHHHHHHHHHHH----------------------HHHHhhh-----cccccccceeeecCChHHHHHHHH
Confidence 4778999999998765433211 2233221 111235569999999999999999
Q ss_pred HHcCCCcccccccccccccccccccchHHHHHHHHHH----cCCCCC---CCEEEEEEeChhHhhhheeeEEe
Q 009935 423 KNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEA----KGRMRK---GDRTWQIAFGSGFKCNSAVWQAL 488 (522)
Q Consensus 423 ~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~----~g~l~~---Gd~VlliafGsG~~~~s~v~r~~ 488 (522)
+.|+|+++++.+|+++|++|||+||+++++.|+++.+ +|.... +++++++|||+||+..++++|.+
T Consensus 78 ~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 78 EALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred HHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 9999999999999999999999999999999999887 354333 48999999999999999999976
No 42
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.69 E-value=1e-15 Score=155.20 Aligned_cols=318 Identities=18% Similarity=0.232 Sum_probs=215.5
Q ss_pred CCCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHH
Q 009935 104 RPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAE 183 (522)
Q Consensus 104 ~~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~ 183 (522)
+|.+|.|.++.+|.|. ..|+++++..+-+. +.. ....|+++....-..+ ||++.
T Consensus 8 ~p~dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g--------KytIGLGq~~Mgfcsd------------rEDi~ 61 (462)
T KOG1393|consen 8 WPKDVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG--------KYTIGLGQTQMGFCSD------------REDII 61 (462)
T ss_pred CccccceeEEEEEcCc--cccChhhHhhcCCc----ccc--------ceEeccCcceecccCc------------hhhhh
Confidence 5779999999999999 77999998776442 111 1246777665432221 23344
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcC--CCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYK--LRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LG--l~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.++..++++++++-+++++.|+-|-|.|. .-.-..|.-..+.+-|+ -..++..+|..+ +|.||..||--|.+++++
T Consensus 62 Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiES 140 (462)
T KOG1393|consen 62 SLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIES 140 (462)
T ss_pred hhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhhh
Confidence 55699999999999999999999999984 44567788888898887 556899999996 999999999999999998
Q ss_pred CC--CCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeecc
Q 009935 261 HP--NSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQRE 338 (522)
Q Consensus 261 ~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~ 338 (522)
.. ++++|||++|+.- +-.++-| +.=|-||.|+|+++...-. |+- ++..+|+.. .|+. |.+
T Consensus 141 ssWDGr~aivV~gDIAv--Y~~G~aR------pTGGAgAVAmLIgPnApi~----fer-glr~thM~h---ayDF-yKP- 202 (462)
T KOG1393|consen 141 SSWDGRYAIVVCGDIAV--YAKGNAR------PTGGAGAVAMLIGPNAPII----FER-GLRATHMQH---AYDF-YKP- 202 (462)
T ss_pred cccCCceeEEEEeeEEE--ecCCCCC------CCCCcceEEEEEcCCCceE----ecc-cchhhhhhh---hhhc-cCC-
Confidence 74 7999999999852 2234444 4569999999998765421 110 122233321 2321 222
Q ss_pred CCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHH-------HHHHHHHhhcccccccccccccEEEEc
Q 009935 339 DDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATL-------VAKKVFKMKIKPYIPDFKLAFEHFCIH 411 (522)
Q Consensus 339 d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~-------~~~~v~~~~~~~~~~~~~~did~f~~H 411 (522)
.+..+-|.|.|+- .+..|++. ..+++-+...+. -++-.++||.+++|
T Consensus 203 --------dl~SEyPvVDGkl-----------------Si~cYl~Ald~cY~~~~kK~~~~~~~~-~~~~l~~fdy~ifH 256 (462)
T KOG1393|consen 203 --------DLLSEYPVVDGKL-----------------SIQCYLSALDRCYTVYRKKIAAQWQKS-GSDNLNSFDYIIFH 256 (462)
T ss_pred --------CCCCcCceecCee-----------------hHHHHHHHHHHHHHHHHHHHHHHhccc-cCcccccCCeEEEe
Confidence 2334455554431 11122211 122222222111 22335689999999
Q ss_pred CCChHHHHH-H-----------------------------------------HHHcCCCcccccccccccccccccccch
Q 009935 412 AGGRAVLDE-L-----------------------------------------EKNLELSEWHMEPSRMTLYRFGNTSSSS 449 (522)
Q Consensus 412 ~~g~~vl~~-i-----------------------------------------~~~Lgl~~e~~~~S~~tl~r~GNtsSas 449 (522)
.+--++.+. + +-...+-.+|+.+|...-.+.||+.++|
T Consensus 257 sP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaS 336 (462)
T KOG1393|consen 257 SPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTAS 336 (462)
T ss_pred CchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHH
Confidence 987665544 1 1122333457777777777999999999
Q ss_pred HHHHHHHHHHcC--CCCCCCEEEEEEeChhHhhhheeeEEeccCC
Q 009935 450 LWYELAYSEAKG--RMRKGDRTWQIAFGSGFKCNSAVWQALRTIN 492 (522)
Q Consensus 450 i~~~La~~~~~g--~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~ 492 (522)
++..|+-++... .--.|.||.+.++|||......-+|...+..
T Consensus 337 ly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~ 381 (462)
T KOG1393|consen 337 LYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDAT 381 (462)
T ss_pred HHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCC
Confidence 999999888764 3347999999999999988888888776443
No 43
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.67 E-value=1.2e-15 Score=159.48 Aligned_cols=256 Identities=14% Similarity=0.063 Sum_probs=167.4
Q ss_pred HHHHHHHHHHHHHHHhcC-CCCCCcCEEEEeec------CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHH
Q 009935 181 EAEMVMFGAIDELLSKTG-VKAKDIGILVVNCS------LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDL 253 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~ag-i~p~dID~LI~~~s------~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~l 253 (522)
...+|+..|++++|++++ +++++||++|+.++ ++...|.++..+++++|+.....++++++ ||++++.||..
T Consensus 64 r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~-~casg~~Al~~ 142 (348)
T PRK06147 64 RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIAR-GRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccc-cchHHHHHHHH
Confidence 456788999999999999 79999999988643 23334567889999999965577899995 99999999999
Q ss_pred HHHHHHcCCCCeEEEEEecccccc----ccc------CCCccccccccccccceEEEEEecCCCccccccceeeeEEEEE
Q 009935 254 AKQLLQVHPNSYALVVSMENITLN----WYF------GNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTH 323 (522)
Q Consensus 254 A~~lL~~~~~~~aLVVs~E~~s~~----~~~------~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~ 323 (522)
|.++|+.+..+.+||+++|.++.. ++. .+++. ...+|||||+++||++.+....+ .-++.. . .
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~r-ga~i~a-~--g 215 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEAP-GLPLLG-L--G 215 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhcC-CCceEE-E--E
Confidence 999999999999999999987641 111 11221 24689999999999976542211 122322 1 1
Q ss_pred ecCCCCccceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccc
Q 009935 324 KGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKL 403 (522)
Q Consensus 324 ~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~ 403 (522)
.+.+...+. . +.+.|. .+ +.+ .+.++.++++ .+...+
T Consensus 216 ~~~~~~~~~---~------------~~~~p~-~g------------------~gl--------~~ai~~AL~~-agl~~~ 252 (348)
T PRK06147 216 LGREPAPVG---E------------SEDLPL-RG------------------DGL--------TQAIRAALAE-AGCGLE 252 (348)
T ss_pred EeecCCCcc---c------------CCCCCC-Ch------------------HHH--------HHHHHHHHHH-cCCCHH
Confidence 111111100 0 000000 00 000 1122222222 233358
Q ss_pred cccEEEEcCCChHHHHHH-----HHHcCCCcccccccccccccccccccchHHHHHHHHHH--cCCCCCCCEEEEEEeCh
Q 009935 404 AFEHFCIHAGGRAVLDEL-----EKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEA--KGRMRKGDRTWQIAFGS 476 (522)
Q Consensus 404 did~f~~H~~g~~vl~~i-----~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~--~g~l~~Gd~VlliafGs 476 (522)
|||+++.|..|....+.. .+.++-..+.. +-..+-..+||+++|+-.+++..... +...-+|+++++.+-.-
T Consensus 253 dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~-~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 253 DMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFF-DLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HCCEEEcCCCCCccchHHHHHHHHHHhhhccCCC-ceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCC
Confidence 999999999877664433 33454322222 11345677999999999999886443 23446799999999987
Q ss_pred hHhhhheeeEEe
Q 009935 477 GFKCNSAVWQAL 488 (522)
Q Consensus 477 G~~~~s~v~r~~ 488 (522)
.-..++++++..
T Consensus 332 ~g~r~a~~l~~~ 343 (348)
T PRK06147 332 DGARAALVLEYR 343 (348)
T ss_pred CCceEEEEEecc
Confidence 777899998854
No 44
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.67 E-value=4.6e-15 Score=150.74 Aligned_cols=115 Identities=16% Similarity=0.193 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHP 262 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~ 262 (522)
.+|+.+|+++||+++|++++|||.+|+++.++. +..+..++++||++ .|++++ +|++++.||.+|..++++|.
T Consensus 51 ~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~Q--~~~As~vA~~LGIP----~fdV~~-ACSTf~~AL~lAa~lI~SG~ 123 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKKDDVDFFLAGDLLNQ--IITANFVARDLGIP----FLGLYG-ACSTSMETLALGAMLVDGGF 123 (327)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCCc--ccHHHHHHHHhCCC----EEEEec-cCHHHHHHHHHHHHHHhCCC
Confidence 456799999999999999999999998875443 45688999999974 599996 99999999999999999999
Q ss_pred CCeEEEEEeccccc---ccc---cC--CCccccccccccccceEEEEEecCCC
Q 009935 263 NSYALVVSMENITL---NWY---FG--NDRSMLVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 263 ~~~aLVVs~E~~s~---~~~---~~--~dr~~l~~~~lfgDGAAAvLLs~~~~ 307 (522)
.++||||++|..+. .+. .+ .++. +..+|+|||+|+||++...
T Consensus 124 ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 124 ADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCC
Confidence 99999999998872 111 12 3444 3589999999999998754
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.55 E-value=2.4e-13 Score=138.57 Aligned_cols=115 Identities=23% Similarity=0.249 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCC
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPN 263 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~ 263 (522)
+|+.+|+++||+++|++++|||.+|+++...+ +..+.++++.||+ ++|++.+ +|+++..||.+|..+++++..
T Consensus 58 eLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG~a 130 (337)
T PRK08304 58 KMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGGFA 130 (337)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcCCC
Confidence 56699999999999999999999999875433 4678899999997 5899996 999999999999999999999
Q ss_pred CeEEEEEecccccc---cccC----CCccccccccccccceEEEEEecCCC
Q 009935 264 SYALVVSMENITLN---WYFG----NDRSMLVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 264 ~~aLVVs~E~~s~~---~~~~----~dr~~l~~~~lfgDGAAAvLLs~~~~ 307 (522)
++||||++|..+.- |..+ ..|.. +...+++||+|+||++...
T Consensus 131 d~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 131 DRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCC
Confidence 99999999998852 3222 23332 4578999999999998654
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.51 E-value=1.1e-12 Score=139.15 Aligned_cols=183 Identities=15% Similarity=0.204 Sum_probs=117.5
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccC--CChhhHHHHHHHHHHhCCccEE--eecCCc--cCCCCCccHHHHH
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGC--FSEENLAFQKKILERSGLGQHT--YFPEAV--LRVPPNPCMAEAR 179 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~--~~~e~~~f~~ki~~~sGi~er~--~~~~~~--~~~~~~~~ma~~~ 179 (522)
++|+|+++|+..|. -.+.+++.+.+.. |. +.+-. + ++..+...+. ..+... ...+ .......
T Consensus 1 ~~i~I~G~g~~~p~---g~~~~~~~~~l~~-g~~~~~~~~-~-----~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~ 68 (406)
T cd00834 1 RRVVITGLGAVTPL---GNGVEEFWEALLA-GRSGIRPIT-R-----FDASGFPSRIAGEVPDFDPEDYLD--RKELRRM 68 (406)
T ss_pred CcEEEECcceeCCC---cCCHHHHHHHHHc-CCCeeEECC-c-----ccccCCCccEEEEcCCCChhhcCC--HHHhccC
Confidence 37999999999998 2567777776532 11 00000 0 0011111111 111111 0001 0111112
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcCE----EEEeecC-C--------------------------CCCccHHHHHHHHc
Q 009935 180 NEAEMVMFGAIDELLSKTGVKAKDIGI----LVVNCSL-F--------------------------CPTPSLSAMIVNHY 228 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~agi~p~dID~----LI~~~s~-~--------------------------~~~Ps~a~~I~~~L 228 (522)
....+++..|++++|+++|+++++||. ++++++. . ...+..+.+|+..|
T Consensus 69 ~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 148 (406)
T cd00834 69 DRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRL 148 (406)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHh
Confidence 346778999999999999999877654 4444321 1 12356788999999
Q ss_pred CCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------------------cccC-CCcc
Q 009935 229 KLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLN----------------------WYFG-NDRS 285 (522)
Q Consensus 229 Gl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~----------------------~~~~-~dr~ 285 (522)
|++ ..++.++. +|++++.||..|.++|++|..++|||+++|..+.. ..+. .++
T Consensus 149 gl~--g~~~~v~~-acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~- 224 (406)
T cd00834 149 GLR--GPNYTVST-ACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR- 224 (406)
T ss_pred CCC--Ccccccch-HHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC-
Confidence 996 57889995 99999999999999999999999999999987610 0000 112
Q ss_pred ccccccccccceEEEEEecCCC
Q 009935 286 MLVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 286 ~l~~~~lfgDGAAAvLLs~~~~ 307 (522)
...++||||+|+||++.+.
T Consensus 225 ---~g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 225 ---DGFVLGEGAGVLVLESLEH 243 (406)
T ss_pred ---CCEeeeccEEEEEEecHHH
Confidence 2468999999999997654
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.50 E-value=9e-13 Score=139.73 Aligned_cols=93 Identities=14% Similarity=0.208 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
..+|+.+|++++|+++|++++|||.||++++ +++..|..+..+++++|+++++++++++ ++|++++.+|.+|.+++++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~s 100 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAA 100 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHC
Confidence 3466799999999999999999999998864 4555788888899999998558899999 5999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 009935 261 HPNSYALVVSMENIT 275 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s 275 (522)
|..++|||+++|.+|
T Consensus 101 G~~~~vLv~g~e~~s 115 (386)
T cd00751 101 GEADVVVAGGVESMS 115 (386)
T ss_pred CCCCeEEEeeeeccc
Confidence 999999999999865
No 48
>PRK09051 beta-ketothiolase; Provisional
Probab=99.42 E-value=1.6e-11 Score=130.43 Aligned_cols=93 Identities=19% Similarity=0.230 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCc-cHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTP-SLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~P-s~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.+|+.+|++++|+++|++|+|||.||++|+ ++...+ ..+..+...+|+++++++++++ .+|++|+.|+.+|.+++++
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~s 106 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAILL 106 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHHc
Confidence 456699999999999999999999999864 444433 4556666778997679999999 4999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+++||+++|.+|.
T Consensus 107 G~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 107 GDADVAIGGGAESMSR 122 (394)
T ss_pred CCCCEEEEEeehhccc
Confidence 9999999999998874
No 49
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.40 E-value=9.8e-12 Score=131.86 Aligned_cols=94 Identities=18% Similarity=0.240 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
..+|+.+|+++||+++|++++|||.+|+++. ++...|..+..++.++|++.++++++++ .+|++++.++.+|.+++++
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 99 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIRA 99 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHHC
Confidence 3566799999999999999999999998764 4554577788999999998668999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+++||+++|.++.
T Consensus 100 G~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 100 GEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999998653
No 50
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.39 E-value=2.4e-11 Score=129.20 Aligned_cols=93 Identities=17% Similarity=0.229 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
.+|+.+|++++|+++|++|+|||.+|++|+ +....|..+..++.++|++..+++|+++. +|++|+.++..|.+++++|
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~~-~Casg~~ai~~A~~~I~sG 105 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNK-VCGSGLKALHLAAQAIRCG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEecc-cchhHHHHHHHHHHHHHcC
Confidence 456699999999999999999999999875 43345667888999999985589999995 9999999999999999999
Q ss_pred CCCeEEEEEeccccc
Q 009935 262 PNSYALVVSMENITL 276 (522)
Q Consensus 262 ~~~~aLVVs~E~~s~ 276 (522)
..+++||+++|.+|.
T Consensus 106 ~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 106 DAEVIIAGGQENMSL 120 (393)
T ss_pred CCCEEEEEEEhhhcc
Confidence 999999999997764
No 51
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.38 E-value=3.5e-11 Score=127.75 Aligned_cols=91 Identities=20% Similarity=0.207 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCC--CccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCP--TPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
.+|+.+|++++|+++|++++|||.+|++++ ++.. .|..+.+++..+|++ ..++++++ ++|++++.+|..|.++++
T Consensus 23 ~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I~ 100 (389)
T PRK06064 23 RDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAVA 100 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHHH
Confidence 456699999999999999999999998754 3332 467889999999997 78899999 499999999999999999
Q ss_pred cCCCCeEEEEEecccc
Q 009935 260 VHPNSYALVVSMENIT 275 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~s 275 (522)
+|..+++||+++|..+
T Consensus 101 sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 101 SGEADVVLAAGVEKMT 116 (389)
T ss_pred CCCCCEEEEEEEEecc
Confidence 9999999999999755
No 52
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.37 E-value=4e-11 Score=126.40 Aligned_cols=93 Identities=17% Similarity=0.116 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
..+|+.+|++++|+++|++++|||.+++.++ +....|..+..+++++|++ ++++++++ .+|++++.++..|.+++++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHHh
Confidence 4566799999999999999999999998764 4444577889999999997 78999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
+..+++||+++|..+.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 53
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.36 E-value=1.3e-12 Score=107.93 Aligned_cols=79 Identities=24% Similarity=0.416 Sum_probs=59.9
Q ss_pred EEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCCcccccccee
Q 009935 237 YNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQL 316 (522)
Q Consensus 237 ~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L 316 (522)
|||+ ++|++++.||++|.++++++..++||||++|+.+. +.++.++.. ..+|||||+|+||++.++. .+++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~~---~~~~gDgAaA~vl~~~~~~----~~~i 71 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQT---AFIFGDGAAAVVLSRDEEG----GFGI 71 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHHH---HTTB-EEEEEEEEEEESSS----SCEE
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccCc---ceeecchheEEEEEecCCC----CCeE
Confidence 7999 59999999999999999999999999999999988 444444442 4689999999999997432 3555
Q ss_pred eeEEEEEecCC
Q 009935 317 IHTVRTHKGAD 327 (522)
Q Consensus 317 ~~~v~t~~~~d 327 (522)
++ +++.+|
T Consensus 72 l~---~~~~td 79 (80)
T PF08545_consen 72 LD---SHLRTD 79 (80)
T ss_dssp EE---EEEEE-
T ss_pred EE---EEEEcC
Confidence 43 444444
No 54
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.35 E-value=4.4e-11 Score=127.95 Aligned_cols=123 Identities=17% Similarity=0.187 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcC----EEEEeec-CCCC-------------------CccHHHHHHHHcCCCCCeeEE
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIG----ILVVNCS-LFCP-------------------TPSLSAMIVNHYKLRGNITSY 237 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID----~LI~~~s-~~~~-------------------~Ps~a~~I~~~LGl~~~~~~~ 237 (522)
...++..|++++|+++|+++++|| .||++++ .++. .+..+..|+..||++ ..++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCcc
Confidence 456899999999999999999998 7777753 2221 445778899999997 4789
Q ss_pred EecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cccCCC--c--cccccccccccceEEEEEe
Q 009935 238 NLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLN----------WYFGND--R--SMLVSNCLFRMGGAAILLS 303 (522)
Q Consensus 238 dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~~~~d--r--~~l~~~~lfgDGAAAvLLs 303 (522)
.++. +|++++.||..|.++|++|..+++||+++|..... +...+. + +.--...++||||+|+||+
T Consensus 165 ~v~~-acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaalVLe 243 (424)
T smart00825 165 TVDT-ACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVLK 243 (424)
T ss_pred cccc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEEEEc
Confidence 9995 99999999999999999999999999999974320 000000 0 0001246899999999999
Q ss_pred cCCC
Q 009935 304 NRSS 307 (522)
Q Consensus 304 ~~~~ 307 (522)
+...
T Consensus 244 ~~e~ 247 (424)
T smart00825 244 RLSD 247 (424)
T ss_pred cHHH
Confidence 7543
No 55
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=7.7e-11 Score=125.50 Aligned_cols=94 Identities=15% Similarity=0.220 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhc-CCCCCCcCEEEEee-cCCCCCccHHHHHH-HHcCCCCCeeEEEecCCCchHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKT-GVKAKDIGILVVNC-SLFCPTPSLSAMIV-NHYKLRGNITSYNLGGMGCSAGLISIDLAKQLL 258 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~a-gi~p~dID~LI~~~-s~~~~~Ps~a~~I~-~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL 258 (522)
..+|+.+|++++|+++ |++|+|||.||+++ .++...|...++++ ..+|++..+++++++ .+|++|+.|+..|.+++
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I 109 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRI 109 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHH
Confidence 3566799999999997 99999999999986 45555565566654 455997458999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009935 259 QVHPNSYALVVSMENITL 276 (522)
Q Consensus 259 ~~~~~~~aLVVs~E~~s~ 276 (522)
++|..+.+||++.|.+|.
T Consensus 110 ~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 110 RVGEADVMIAAGVESMSM 127 (399)
T ss_pred HCCCCCEEEEEEEecccc
Confidence 999999999999998864
No 56
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=1.6e-10 Score=122.74 Aligned_cols=91 Identities=19% Similarity=0.108 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCC--CccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCP--TPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.+|+.+|+++||+++|++++|||.||++++++.. .+..+..|+++||++ ..+++++++ +|+++..++..|..+|++
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~-~casg~~al~~A~~~I~s 102 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVHT-AGSVGGSTAVVAASLVQS 102 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEec-cCHHHHHHHHHHHHHHHC
Confidence 4566999999999999999999999988654432 122337899999997 688999995 999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 009935 261 HPNSYALVVSMENIT 275 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s 275 (522)
|..++||||++|..+
T Consensus 103 G~~~~vLVvg~e~~s 117 (386)
T PRK08313 103 GVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCEEEEEEEEEcc
Confidence 999999999999764
No 57
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.27 E-value=3.6e-10 Score=120.20 Aligned_cols=121 Identities=12% Similarity=0.115 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCE----EEEeecCC------------------CC--------Cc-cHHHHHHHHcCC
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGI----LVVNCSLF------------------CP--------TP-SLSAMIVNHYKL 230 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~----LI~~~s~~------------------~~--------~P-s~a~~I~~~LGl 230 (522)
..+++..|++++|+++|+++++||. +++.++.. .. .+ ..+..|...||+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4678899999999999999999886 55544211 00 11 245678899999
Q ss_pred CCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cc---c--------CCCcccccc
Q 009935 231 RGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLN----------WY---F--------GNDRSMLVS 289 (522)
Q Consensus 231 ~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~---~--------~~dr~~l~~ 289 (522)
+ ..++.+.. +|++++.||..|.++|++|..+.+||++.|..... .. . +-|+. -.
T Consensus 151 ~--g~~~~v~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~--~~ 225 (407)
T TIGR03150 151 K--GPNHAVVT-ACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD--RD 225 (407)
T ss_pred C--Cccccccc-HHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC--CC
Confidence 5 66888885 99999999999999999999999999999963220 00 0 00110 02
Q ss_pred ccccccceEEEEEecCCC
Q 009935 290 NCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 290 ~~lfgDGAAAvLLs~~~~ 307 (522)
..++||||+|+||++.+.
T Consensus 226 g~~~gEGAaalvL~~~~~ 243 (407)
T TIGR03150 226 GFVMGEGAGVLVLEELEH 243 (407)
T ss_pred cEEEeceEEEEEEeeHHH
Confidence 367899999999997653
No 58
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.27 E-value=2.7e-10 Score=121.29 Aligned_cols=123 Identities=14% Similarity=0.135 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCC-cC----EEEEeecCC-----------------------CCC--ccHHHHHHHHcCC
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKD-IG----ILVVNCSLF-----------------------CPT--PSLSAMIVNHYKL 230 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~d-ID----~LI~~~s~~-----------------------~~~--Ps~a~~I~~~LGl 230 (522)
....++..|++++|+++|+++++ ++ .+++.++.. ... ...+..|...||+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45678999999999999998765 33 233333210 111 4567889999999
Q ss_pred CCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc--------------------cccCCCccccccc
Q 009935 231 RGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLN--------------------WYFGNDRSMLVSN 290 (522)
Q Consensus 231 ~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~--------------------~~~~~dr~~l~~~ 290 (522)
+ .-.++.+.+ +|++++.||..|.++|++|..+.+||.++|..+.. ...+.|+. -..
T Consensus 151 ~-~Gp~~tv~~-aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~--~~G 226 (407)
T cd00828 151 S-HGPIKTPVG-ACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDET--RDG 226 (407)
T ss_pred C-CCCCcCccc-HHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCC--CCc
Confidence 3 367899995 99999999999999999999999999999986510 00011111 124
Q ss_pred cccccceEEEEEecCCC
Q 009935 291 CLFRMGGAAILLSNRSS 307 (522)
Q Consensus 291 ~lfgDGAAAvLLs~~~~ 307 (522)
+++||||+++||++...
T Consensus 227 ~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 227 FVEAEGAGVLVLERAEL 243 (407)
T ss_pred EEeecceEEEEEeeHHH
Confidence 78999999999997654
No 59
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.27 E-value=8.7e-10 Score=118.47 Aligned_cols=119 Identities=18% Similarity=0.266 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcC------------------EEEEeec----------------CCC-------CCccH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIG------------------ILVVNCS----------------LFC-------PTPSL 220 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID------------------~LI~~~s----------------~~~-------~~Ps~ 220 (522)
...++..|++++|+++|+++.+.+ .++..+. +.. ..|+.
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 356789999999999999654322 1111111 111 45678
Q ss_pred HHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecc---------------ccccc------c
Q 009935 221 SAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMEN---------------ITLNW------Y 279 (522)
Q Consensus 221 a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~---------------~s~~~------~ 279 (522)
+..|+..||++ ..+++++. +|++++.||..|.++|++|..+.+||+++|. ++..- .
T Consensus 155 a~~i~~~~gl~--G~~~~i~~-aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 231 (425)
T PRK06501 155 ADRLADRFGTR--GLPISLST-ACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231 (425)
T ss_pred HHHHHHHhCCC--CCceeecC-ccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCccc
Confidence 99999999996 67899995 9999999999999999999999999999993 22100 0
Q ss_pred cC--CCccccccccccccceEEEEEecCCC
Q 009935 280 FG--NDRSMLVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 280 ~~--~dr~~l~~~~lfgDGAAAvLLs~~~~ 307 (522)
.+ .+|+ ..++||||+|+||++...
T Consensus 232 rpfd~~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 232 KPFSKDRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCCCCCCC----CeeeeccEEEEEECcHHH
Confidence 00 2333 368999999999997553
No 60
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.25 E-value=1e-09 Score=117.03 Aligned_cols=122 Identities=20% Similarity=0.190 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCE----EEEeec-CCC-------------------CCccHHHHHHHHcCCCCCeeE
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGI----LVVNCS-LFC-------------------PTPSLSAMIVNHYKLRGNITS 236 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~----LI~~~s-~~~-------------------~~Ps~a~~I~~~LGl~~~~~~ 236 (522)
....++..|++++|+++|++++++|. ++++++ .++ ..+..+..|+..+|++ ..+
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 35789999999999999999888774 555542 111 1245678899999996 478
Q ss_pred EEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------------cccCCCccccccccccccceEEE
Q 009935 237 YNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLN----------------WYFGNDRSMLVSNCLFRMGGAAI 300 (522)
Q Consensus 237 ~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~----------------~~~~~dr~~l~~~~lfgDGAAAv 300 (522)
+.+.+ +|++++.||..|.++|++|..+.+||+++|..+.. ...+-++ .-...++||||+|+
T Consensus 164 ~~v~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~--~~~g~~~geGAaal 240 (421)
T cd00833 164 LTVDT-ACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDA--DADGYVRGEGVGVV 240 (421)
T ss_pred eeecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCC--CCCCeeeeceEEEE
Confidence 99995 99999999999999999999999999999975310 0001111 01246899999999
Q ss_pred EEecCCC
Q 009935 301 LLSNRSS 307 (522)
Q Consensus 301 LLs~~~~ 307 (522)
||++.+.
T Consensus 241 vL~~~~~ 247 (421)
T cd00833 241 VLKRLSD 247 (421)
T ss_pred EEeeHHH
Confidence 9997554
No 61
>PRK05790 putative acyltransferase; Provisional
Probab=99.25 E-value=4.1e-10 Score=119.73 Aligned_cols=92 Identities=13% Similarity=0.164 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
.+|+.+|++++|+++|++|+|||.+|+++. +....+..+..++..+|++.++++++++. +|++++.+|..|.+++++|
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~-~Casg~~al~~A~~~I~sG 105 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTINK-VCGSGLKAVALAAQAIRAG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeecc-cchHHHHHHHHHHHHHHcC
Confidence 456699999999999999999999998763 32223445566777889975688999995 9999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 009935 262 PNSYALVVSMENIT 275 (522)
Q Consensus 262 ~~~~aLVVs~E~~s 275 (522)
..+++||++.|.+|
T Consensus 106 ~~d~vLv~G~e~~s 119 (393)
T PRK05790 106 DADIVVAGGQESMS 119 (393)
T ss_pred CCCEEEEEeeeccc
Confidence 99999999998754
No 62
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.23 E-value=5.4e-10 Score=119.04 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.++|+.+|++++|+++|++|+|||.+|++++ +.....+.+......+|++.++++++++ ++|++|+.|+..|.+++++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHC
Confidence 3466799999999999999999999999864 3333334444455566777679999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+++||++.|.+|.
T Consensus 110 G~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 110 GSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCEEEEEeeeccCC
Confidence 9999999999999883
No 63
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=4.6e-10 Score=119.49 Aligned_cols=90 Identities=17% Similarity=0.306 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCC---CccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHH
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCP---TPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLL 258 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~---~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL 258 (522)
.+|+.+|++++|+++|++|+|||.+|+++. +++. .++....+...++ .++++++++ ++|++|+.++..|.+++
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~I 109 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAMEI 109 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHHH
Confidence 456699999999999999999999999864 3332 2344455666665 368999999 59999999999999999
Q ss_pred HcCCCCeEEEEEecccc
Q 009935 259 QVHPNSYALVVSMENIT 275 (522)
Q Consensus 259 ~~~~~~~aLVVs~E~~s 275 (522)
++|..+++||+++|.+|
T Consensus 110 ~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 110 ATGMADIVIAGGVEHMT 126 (394)
T ss_pred HcCCCCEEEEeeecccc
Confidence 99999999999999766
No 64
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.22 E-value=8.1e-10 Score=112.38 Aligned_cols=116 Identities=16% Similarity=0.239 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHP 262 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~ 262 (522)
.+|+.+|+++||+++|++++|||.+++.+......|+ ..+++.||++ .++|.+ +|+++..||.+|..++++|.
T Consensus 55 ~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG~ 127 (334)
T PRK12404 55 RKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSGG 127 (334)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcCC
Confidence 3577999999999999999999999999876666776 4999999965 599997 99999999999999999999
Q ss_pred CCeEEEEEeccccc---ccccC----CCccccccccccccceEEEEEecCCC
Q 009935 263 NSYALVVSMENITL---NWYFG----NDRSMLVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 263 ~~~aLVVs~E~~s~---~~~~~----~dr~~l~~~~lfgDGAAAvLLs~~~~ 307 (522)
.++|||+++-.... .|..+ ..|.. +...---||+|+||++...
T Consensus 128 Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~~ 177 (334)
T PRK12404 128 AKYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTGD 177 (334)
T ss_pred CCEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCCC
Confidence 99999998766542 23222 22321 2234457899999987643
No 65
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.18 E-value=4.2e-09 Score=112.47 Aligned_cols=185 Identities=11% Similarity=0.083 Sum_probs=115.0
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccC--CChhhHHHHHHHHHHhCCccEE--eecCCc--cCCCCCccHHHHH
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGC--FSEENLAFQKKILERSGLGQHT--YFPEAV--LRVPPNPCMAEAR 179 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~--~~~e~~~f~~ki~~~sGi~er~--~~~~~~--~~~~~~~~ma~~~ 179 (522)
++|.|+|+||..|- -.+.+++.+.+.. |. +.+-. + +...+...+. .++... ...++ .+ ....
T Consensus 2 ~~v~ItG~g~~~p~---g~~~~~~w~~l~~-g~~~~~~~~-~-----~~~~~~~~~~~g~i~~f~~~~~~~~-~~-~~~~ 69 (411)
T PRK07314 2 RRVVVTGLGAVSPL---GNDVESTWKNLLA-GKSGIGPIT-H-----FDTSDLAVKIAGEVKDFNPDDYMSR-KE-ARRM 69 (411)
T ss_pred CcEEEEcceEECCC---cCCHHHHHHHHHh-CCCcEEECC-c-----ccccCCCccEEEEeCCcChhhcCCH-HH-hhcC
Confidence 47999999999997 3677888776542 11 00000 0 0011111110 111000 00111 00 0111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcC----EEEEeecCC----------------------C----CCc-cHHHHHHHHc
Q 009935 180 NEAEMVMFGAIDELLSKTGVKAKDIG----ILVVNCSLF----------------------C----PTP-SLSAMIVNHY 228 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~agi~p~dID----~LI~~~s~~----------------------~----~~P-s~a~~I~~~L 228 (522)
.....++..|++++|+++|++++++| .++++++.. . ..+ ..+..|...|
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (411)
T PRK07314 70 DRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRY 149 (411)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHh
Confidence 23467899999999999999999888 466654311 0 111 2467899999
Q ss_pred CCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccccccc--c-------------------cCCCcccc
Q 009935 229 KLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNW--Y-------------------FGNDRSML 287 (522)
Q Consensus 229 Gl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~--~-------------------~~~dr~~l 287 (522)
|++ -.++-+.. +|++++.||..|.++|++|..+.+||.+.|.....+ + .+-|+.
T Consensus 150 gl~--Gp~~tv~~-acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~-- 224 (411)
T PRK07314 150 GAK--GPNHSIVT-ACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKD-- 224 (411)
T ss_pred CCC--Cccccchh-hhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCC--
Confidence 996 56788885 999999999999999999999999999998643210 0 000111
Q ss_pred ccccccccceEEEEEecCCC
Q 009935 288 VSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 288 ~~~~lfgDGAAAvLLs~~~~ 307 (522)
-..+++||||+|+||++...
T Consensus 225 ~dG~~~geGAaavvL~~~~~ 244 (411)
T PRK07314 225 RDGFVMGEGAGILVLEELEH 244 (411)
T ss_pred CCCEeEEceEEEEEEeeHHH
Confidence 02468999999999987543
No 66
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.18 E-value=1.6e-09 Score=115.13 Aligned_cols=93 Identities=17% Similarity=0.211 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCC-CccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCP-TPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.+|+.+|++++|+++|+.++|||.+|++++ ++.. .+.++.+++..+|++..+++++++ .+|++|+.|+..|...+++
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~s 106 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIML 106 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 466799999999999988899999999864 3333 477778899999998569999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+.+||++.|.+|.
T Consensus 107 G~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 107 GHSEAVIAGGAESMSL 122 (391)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 67
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=3e-09 Score=113.32 Aligned_cols=94 Identities=14% Similarity=0.175 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC--CCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSLF--CPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
+++|+..+++.+|+++|++|++||-||+.|... ...+.++.++.-+-||+.+++++.|+ +.|++++.|+.+|.+.++
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHHH
Confidence 566779999999999999999999999997632 22477889999999999899999999 799999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009935 260 VHPNSYALVVSMENITL 276 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~s~ 276 (522)
+|..+.+|+.+.|.+|.
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999996
No 68
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.13 E-value=4.7e-09 Score=112.59 Aligned_cols=120 Identities=14% Similarity=0.182 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCc-C----EEEEeecCC----------------------CCCc-----cHHHHHHHHc
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDI-G----ILVVNCSLF----------------------CPTP-----SLSAMIVNHY 228 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dI-D----~LI~~~s~~----------------------~~~P-----s~a~~I~~~L 228 (522)
....++..|++++|+++|++++++ + .+++.++.. +..| ..+.+|...|
T Consensus 81 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 160 (424)
T PRK06333 81 RFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRY 160 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHh
Confidence 356788999999999999987766 3 344444311 0011 2367889999
Q ss_pred CCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccccccc----------cc------------C--CCc
Q 009935 229 KLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNW----------YF------------G--NDR 284 (522)
Q Consensus 229 Gl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~----------~~------------~--~dr 284 (522)
|++ -+++.++. +|++++.||..|.++|++|..+.+||+++|.....+ +. + .++
T Consensus 161 gl~--Gp~~~v~~-aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~ 237 (424)
T PRK06333 161 GFK--GPLGAPVT-ACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDR 237 (424)
T ss_pred CCC--CCCccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCC
Confidence 996 67788885 999999999999999999999999999999732100 00 0 011
Q ss_pred cccccccccccceEEEEEecCCC
Q 009935 285 SMLVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 285 ~~l~~~~lfgDGAAAvLLs~~~~ 307 (522)
+ ..+.||||+++||++...
T Consensus 238 ~----G~~~gEGaa~lvLe~~~~ 256 (424)
T PRK06333 238 D----GFVMGEGAGILVIETLEH 256 (424)
T ss_pred C----CeEEecceEEEEEeeHHH
Confidence 2 357899999999987543
No 69
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.13 E-value=3e-09 Score=111.87 Aligned_cols=90 Identities=14% Similarity=0.165 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
+++|+..|++++++ |++ +|||.+|+.+.... ....+..+....|++..++++.++. +|++++.|+..|.+.+++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~~-~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTIDR-QCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehhh-hhhHHHHHHHHHHHHHHCC
Confidence 45677999999866 896 89999999864321 2444556889999986799999995 9999999999999999999
Q ss_pred CCCeEEEEEeccccc
Q 009935 262 PNSYALVVSMENITL 276 (522)
Q Consensus 262 ~~~~aLVVs~E~~s~ 276 (522)
..+.+||++.|.+|.
T Consensus 100 ~~d~~l~gG~E~ms~ 114 (361)
T PRK06690 100 AGKCYIAGGVESTST 114 (361)
T ss_pred CCCEEEEeccccccC
Confidence 999999999999874
No 70
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.10 E-value=7.1e-09 Score=112.04 Aligned_cols=93 Identities=14% Similarity=0.203 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCcc-HHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPS-LSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.+|+.+|++++|+++|++++|||.+|+++. +....+. .+..+...+|+++.+++++++ .+|++|+.|+..|.+.+++
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I~s 150 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIKA 150 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHHHc
Confidence 456699999999999999999999998864 4444344 345666778998668999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+.+||++.|.+|.
T Consensus 151 G~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 151 GFYDIGIGAGVESMTT 166 (452)
T ss_pred CCCCeEEEEeEEecCC
Confidence 9999999999998753
No 71
>PRK08256 lipid-transfer protein; Provisional
Probab=99.07 E-value=9.6e-09 Score=109.28 Aligned_cols=88 Identities=17% Similarity=0.204 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSL-FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
.+|+..|++++|+++|++++|||.+++.+.. +... ...+...+|++ ++++++++ .+|++++.+|..|.++|++|
T Consensus 23 ~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 23 PDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHCC
Confidence 4566999999999999999999999887542 2211 23467789997 57889999 59999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 009935 262 PNSYALVVSMENIT 275 (522)
Q Consensus 262 ~~~~aLVVs~E~~s 275 (522)
..+++||+++|.++
T Consensus 98 ~~d~vLv~g~e~~s 111 (391)
T PRK08256 98 AADCALALGFEQMQ 111 (391)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999865
No 72
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.05 E-value=1.4e-08 Score=108.23 Aligned_cols=92 Identities=17% Similarity=0.142 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC-CCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLF-CPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
.+|+.+|++++|+++|++++|||.+|+++... ...+..+..+...+|++.+++++.++. +|+++..++..|.+.+++|
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~~-~caSg~~av~~Aa~~I~sG 104 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVNK-VCASGMKAVMLAAQSIQLG 104 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEec-cchHHHHHHHHHHHHHHcC
Confidence 46679999999999999999999999875321 113345566889999976688999994 9999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 009935 262 PNSYALVVSMENIT 275 (522)
Q Consensus 262 ~~~~aLVVs~E~~s 275 (522)
..+.+||++.|.+|
T Consensus 105 ~~d~vlv~G~E~~s 118 (394)
T PLN02644 105 INDVVVAGGMESMS 118 (394)
T ss_pred CCCEEEEEeEEecC
Confidence 99999999988775
No 73
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.04 E-value=9.1e-10 Score=117.11 Aligned_cols=94 Identities=15% Similarity=0.200 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCcc-HHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPS-LSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
..+|+..|++++|+++|++|+|||.+|+++ .++...|+ .+..+..++|++.++++++++ ++|++|+.|+.+|.++++
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 345669999999999999999999999986 45555554 888999999998779999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009935 260 VHPNSYALVVSMENITL 276 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~s~ 276 (522)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999985
No 74
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.04 E-value=2.7e-08 Score=106.37 Aligned_cols=120 Identities=18% Similarity=0.155 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCE----EEEeecCC--------------------------CCCc-cHHHHHHHHcC
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGI----LVVNCSLF--------------------------CPTP-SLSAMIVNHYK 229 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~----LI~~~s~~--------------------------~~~P-s~a~~I~~~LG 229 (522)
....++..|++++|+++|+++++++. +++.++.. ...| ..+..|...+|
T Consensus 71 ~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (406)
T PRK08439 71 RFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHG 150 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhC
Confidence 35778999999999999999877763 34433210 0112 46788999999
Q ss_pred CCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccc-ccc---------cc-----------cC--CCccc
Q 009935 230 LRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENI-TLN---------WY-----------FG--NDRSM 286 (522)
Q Consensus 230 l~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~-s~~---------~~-----------~~--~dr~~ 286 (522)
++ -.++.+.+ +|++++.||..|.++|++|..+.+||+++|.. +.. .. ++ .+|+
T Consensus 151 l~--Gp~~~~~~-acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~- 226 (406)
T PRK08439 151 LK--GPNLSSVT-ACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRD- 226 (406)
T ss_pred CC--CCcccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCC-
Confidence 97 56788884 99999999999999999999999999999963 210 00 00 1222
Q ss_pred cccccccccceEEEEEecCCC
Q 009935 287 LVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 287 l~~~~lfgDGAAAvLLs~~~~ 307 (522)
..++|+||+++||++...
T Consensus 227 ---G~v~gEGa~~lvLe~~~~ 244 (406)
T PRK08439 227 ---GFVMGEGAGALVLEEYES 244 (406)
T ss_pred ---cEEeeCceEEEEEccHHH
Confidence 368899999999987543
No 75
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.03 E-value=1.2e-08 Score=108.53 Aligned_cols=94 Identities=17% Similarity=0.273 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSL-FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
+++|+..|++++|+++|++|+|||.+|+.+.. .......+.+++..+|++.+++++.++ .+|++|+.|+..|...+++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHHc
Confidence 56677999999999999999999999998643 222456677788999998679999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999998874
No 76
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.02 E-value=5.4e-08 Score=104.35 Aligned_cols=121 Identities=12% Similarity=0.112 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcC----EEEEeecC-C-----------------C--------CCc-cHHHHHHHHcCC
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIG----ILVVNCSL-F-----------------C--------PTP-SLSAMIVNHYKL 230 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID----~LI~~~s~-~-----------------~--------~~P-s~a~~I~~~LGl 230 (522)
...++..|+.++|+++|+++++.+ .+++.++. . . ..| ..+.+|...+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 456789999999999999754332 24444321 0 0 112 367889999999
Q ss_pred CCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccccccc----------cc-----------CCCcccccc
Q 009935 231 RGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNW----------YF-----------GNDRSMLVS 289 (522)
Q Consensus 231 ~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~----------~~-----------~~dr~~l~~ 289 (522)
+ -+++.++. +|++++.||..|.++|+.|..+.+||.++|.....+ .. +-|+.. .
T Consensus 154 ~--Gp~~ti~~-aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~--~ 228 (414)
T PRK08722 154 R--GPNIAIST-ACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR--D 228 (414)
T ss_pred C--CCcccccc-ccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC--C
Confidence 7 57888885 999999999999999999999999999999753210 00 001100 2
Q ss_pred ccccccceEEEEEecCCC
Q 009935 290 NCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 290 ~~lfgDGAAAvLLs~~~~ 307 (522)
..+.|||++++||.+...
T Consensus 229 G~~~gEGaaalvLe~~~~ 246 (414)
T PRK08722 229 GFVLGDGAGMMVLEEYEH 246 (414)
T ss_pred ceEeeceEEEEEEccHHH
Confidence 467899999999987554
No 77
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.02 E-value=1.1e-09 Score=116.84 Aligned_cols=94 Identities=17% Similarity=0.224 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
..+|+.+|++++|+++|++|+|||.+|++++ +....|..+..++..+|++.++++++++ .+|++|+.|+..|.+++++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQT 104 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 3466699999999999999999999999874 5566788888999999998679999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 105 GAADVVIAGGAESMSN 120 (404)
T ss_pred CCCCEEEEeeehhhcc
Confidence 9999999999999885
No 78
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.01 E-value=1.4e-09 Score=115.63 Aligned_cols=94 Identities=19% Similarity=0.190 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
..+|+.+|++++|+++|++|+|||.+|++|. +....+..+..++..+|++.++++++++ .+|++|+.|+..|.+++++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHC
Confidence 3466699999999999999999999999874 3212344556789999997679999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+++||+++|.+|.
T Consensus 105 G~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 105 GDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999999885
No 79
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=98.99 E-value=2.1e-09 Score=114.51 Aligned_cols=94 Identities=14% Similarity=0.259 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCC-ccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPT-PSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~-Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
+.+|+..|++++|+++|++|+|||.||++|. +.... +..+.......|++.++++++|+ ++|++|+.||.+|.++++
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHH
Confidence 4566799999999999999999999999874 43332 34556666888997679999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009935 260 VHPNSYALVVSMENITL 276 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~s~ 276 (522)
+|..+++||+++|.+|.
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999986
No 80
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.98 E-value=5.9e-08 Score=103.20 Aligned_cols=94 Identities=14% Similarity=0.210 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC--CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSL--FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
.++|+..|++++|+++|++|+|||.+|+.+.. ....+..+..+.-.-||+.+++++.++ .+|++|+.|+..|.+.++
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 45677999999999999999999999998643 211244554444445886689999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009935 260 VHPNSYALVVSMENITL 276 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~s~ 276 (522)
+|..+.+||++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999999874
No 81
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.97 E-value=1.8e-08 Score=107.75 Aligned_cols=121 Identities=16% Similarity=0.250 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHhcCCC---CCCcCEEEEeec----------------CCCCCc---------cHHHHHHHHcCCCCC
Q 009935 182 AEMVMFGAIDELLSKTGVK---AKDIGILVVNCS----------------LFCPTP---------SLSAMIVNHYKLRGN 233 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~---p~dID~LI~~~s----------------~~~~~P---------s~a~~I~~~LGl~~~ 233 (522)
...++..|++++|+++|++ +++|++++-++. +.+..| ..+..|+..||++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 4568899999999999986 466776664432 111122 2567788999996
Q ss_pred eeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecc-cccc----c------------------ccCCCccccccc
Q 009935 234 ITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMEN-ITLN----W------------------YFGNDRSMLVSN 290 (522)
Q Consensus 234 ~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~-~s~~----~------------------~~~~dr~~l~~~ 290 (522)
.+++.+++ +|++++.||..|.++|++|..+.+||+++|. .+.. + ..+-|+. -..
T Consensus 158 G~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~--~dG 234 (410)
T PRK07103 158 GEGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQD--RDG 234 (410)
T ss_pred CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCC--CCC
Confidence 46788986 9999999999999999999999999998863 2110 0 0000111 024
Q ss_pred cccccceEEEEEecCCC
Q 009935 291 CLFRMGGAAILLSNRSS 307 (522)
Q Consensus 291 ~lfgDGAAAvLLs~~~~ 307 (522)
.++||||+|+||++...
T Consensus 235 ~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 235 FIYGEACGAVVLESAES 251 (410)
T ss_pred eeEeeeEEEEEEccHHH
Confidence 68899999999987553
No 82
>PRK06059 lipid-transfer protein; Provisional
Probab=98.97 E-value=2.2e-09 Score=114.41 Aligned_cols=92 Identities=15% Similarity=0.111 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeec-C-CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCS-L-FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.+|+.+|+++||+++|++++|||.||++++ + .+..+..+..|++++|++ +++++++++ +|++++.+|..|.+++++
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~~-~Casg~~al~~A~~~I~s 101 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSYA-ACASGSQALQSARAQILA 101 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceecccc-hhHHHHHHHHHHHHHHHC
Confidence 456799999999999999999999998754 2 344456678999999997 588999995 999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
+..+++|||++|..+.
T Consensus 102 G~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 102 GLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCEEEEEEEcccCC
Confidence 9999999999998763
No 83
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=98.96 E-value=2.6e-09 Score=113.37 Aligned_cols=92 Identities=18% Similarity=0.231 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSL-FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
.+|+.+|++++|+++|++++|||.||++++. ....+..+..++..+|++ +..+++++ ++|++++.||.+|..++++|
T Consensus 22 ~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~sG 99 (385)
T PRK12578 22 QELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVASG 99 (385)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHCC
Confidence 3566999999999999999999999988643 222233478899999998 56789999 59999999999999999999
Q ss_pred CCCeEEEEEeccccc
Q 009935 262 PNSYALVVSMENITL 276 (522)
Q Consensus 262 ~~~~aLVVs~E~~s~ 276 (522)
..+++|||++|.+|.
T Consensus 100 ~~~~vLvvg~e~~s~ 114 (385)
T PRK12578 100 LVDMAIAVGVDKMTE 114 (385)
T ss_pred CCCEEEEEEEeeccc
Confidence 999999999998663
No 84
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.92 E-value=5.2e-09 Score=112.51 Aligned_cols=93 Identities=12% Similarity=0.260 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
.+|+.+|++++|+++|++++|||.||++|. +....+..+..++..+|++.++++++++. +|++++.++..|.+++++|
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~-~CaSg~~al~~A~~~I~sG 106 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQR-NCASGMQALDSAAANIALG 106 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccc-hhhHHHHHHHHHHHHHHCC
Confidence 456699999999999999999999998764 33334677888999999975789999995 9999999999999999999
Q ss_pred CCCeEEEEEeccccc
Q 009935 262 PNSYALVVSMENITL 276 (522)
Q Consensus 262 ~~~~aLVVs~E~~s~ 276 (522)
..+++||+++|.+|.
T Consensus 107 ~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 107 RADLVLAGGVEAMSH 121 (426)
T ss_pred CCCEEEEEEEecccC
Confidence 999999999998775
No 85
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.92 E-value=6.5e-08 Score=102.64 Aligned_cols=92 Identities=11% Similarity=0.194 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CC-CCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSL-FC-PTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~-~~-~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.+|+.+|++++|+++|++++|||.+|+++.. .. ..+..+..+.-..|++..+.++.++ ++|++++.++..|.+.|++
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~s 105 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVMS 105 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHHC
Confidence 4567999999999999999999999987542 11 1233344444457776568889999 5999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 009935 261 HPNSYALVVSMENIT 275 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s 275 (522)
|..+.+||++.|.+|
T Consensus 106 G~~d~vLv~G~e~ms 120 (382)
T PRK07801 106 GTQDLVVAGGVQNMS 120 (382)
T ss_pred CCCCEEEEcchhhhc
Confidence 999999999898553
No 86
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.90 E-value=6.1e-09 Score=110.84 Aligned_cols=93 Identities=18% Similarity=0.155 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHH-HHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAM-IVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~-I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
+.+++..|++++|+++|++|+|||.||++++ +++..+..+.. +++.+|+. +++++++++ +|++|+.++..|.++++
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~~-~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMNN-LCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEecc-hhHHHHHHHHHHHHHHH
Confidence 4567799999999999999999999999875 44434555553 67888886 799999995 99999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009935 260 VHPNSYALVVSMENITL 276 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~s~ 276 (522)
+|..+++||+++|.+|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999875
No 87
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.90 E-value=2.4e-07 Score=102.16 Aligned_cols=118 Identities=15% Similarity=0.186 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCC--------CcCEEEEeecCC-------------------CC------Cc-cHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAK--------DIGILVVNCSLF-------------------CP------TP-SLSAMIVNH 227 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~--------dID~LI~~~s~~-------------------~~------~P-s~a~~I~~~ 227 (522)
...++..|++++|+++|++++ .++ |++.++.. .+ .+ ..+.+|...
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~G-V~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCG-VLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceE-EEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 456889999999999998764 233 44444210 00 11 236788999
Q ss_pred cCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccc-ccc----c-----c-----------cC--CCc
Q 009935 228 YKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENI-TLN----W-----Y-----------FG--NDR 284 (522)
Q Consensus 228 LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~-s~~----~-----~-----------~~--~dr 284 (522)
||++ -+++.+++ +|++++.||..|.++|+.|..+.+||.++|.. +.. | . ++ .+|
T Consensus 278 ~gl~--Gp~~tist-ACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r 354 (540)
T PLN02787 278 LGWM--GPNYSIST-ACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR 354 (540)
T ss_pred hCCC--CCcccccc-ccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC
Confidence 9997 67888985 99999999999999999999999999999962 210 0 0 00 112
Q ss_pred cccccccccccceEEEEEecCCC
Q 009935 285 SMLVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 285 ~~l~~~~lfgDGAAAvLLs~~~~ 307 (522)
+ ..++|+||+++||++...
T Consensus 355 d----Gfv~GEGAa~lVLE~~e~ 373 (540)
T PLN02787 355 D----GFVMGEGAGVLLLEELEH 373 (540)
T ss_pred C----CcccccceEEEEEeeHHH
Confidence 2 468999999999997543
No 88
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.88 E-value=1.2e-07 Score=101.36 Aligned_cols=120 Identities=14% Similarity=0.168 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHhcCCCC------CCcCEEEEeecCC------------------C--------CCc-cHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKA------KDIGILVVNCSLF------------------C--------PTP-SLSAMIVNHY 228 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p------~dID~LI~~~s~~------------------~--------~~P-s~a~~I~~~L 228 (522)
...++..|++++|+++|+.. +++++ ++.++.. . .+| ..+..|...|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv-~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGI-AYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEE-EEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 45688999999999999832 33444 3443210 0 123 2578899999
Q ss_pred CCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc----c-----c-----------cCCCccccc
Q 009935 229 KLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLN----W-----Y-----------FGNDRSMLV 288 (522)
Q Consensus 229 Gl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~----~-----~-----------~~~dr~~l~ 288 (522)
|++ -+++.++. +|++++.||..|.++|+.|..+.+||.++|..+.. | . .+-|+..
T Consensus 152 ~~~--Gp~~ti~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~-- 226 (405)
T PRK09116 152 GLK--GRVIPTSS-ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR-- 226 (405)
T ss_pred CCC--CCcccccc-hhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--
Confidence 997 57888995 99999999999999999999999999999975420 0 0 0001110
Q ss_pred cccccccceEEEEEecCCC
Q 009935 289 SNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 289 ~~~lfgDGAAAvLLs~~~~ 307 (522)
...+.|+||+++||++...
T Consensus 227 ~G~v~gEGa~~~vLe~~~~ 245 (405)
T PRK09116 227 DGLVIGEGAGTLVLEELEH 245 (405)
T ss_pred CCEeeeccEEEEEEccHHH
Confidence 2467899999999996543
No 89
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.85 E-value=4.2e-07 Score=97.02 Aligned_cols=118 Identities=14% Similarity=0.104 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcC----EEEEeecC-C-----------------CCC--------c-cHHHHHHHHcCC
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIG----ILVVNCSL-F-----------------CPT--------P-SLSAMIVNHYKL 230 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID----~LI~~~s~-~-----------------~~~--------P-s~a~~I~~~LGl 230 (522)
...++..|++++|+++|+++++++ .|++.++. . ... + ..+..|...||+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 467889999999999999875433 23444321 1 001 1 246789999999
Q ss_pred CCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cccC------------CCccccc
Q 009935 231 RGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLN----------WYFG------------NDRSMLV 288 (522)
Q Consensus 231 ~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~~~------------~dr~~l~ 288 (522)
+ -+++.++. +|++++.||..|.++|+.+. +.+||.+.|..... .... .+++
T Consensus 151 ~--Gp~~ti~~-acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~--- 223 (399)
T cd00832 151 R--GPSGVVVA-EQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAA--- 223 (399)
T ss_pred C--CCcccccc-hhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCC---
Confidence 7 67788885 99999999999999999999 99999999873210 0000 0122
Q ss_pred cccccccceEEEEEecCCC
Q 009935 289 SNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 289 ~~~lfgDGAAAvLLs~~~~ 307 (522)
..+.|+|+++++|++...
T Consensus 224 -G~~~gEGa~~lvLe~~~~ 241 (399)
T cd00832 224 -GYVPGEGGAILVLEDAAA 241 (399)
T ss_pred -CEeeeceEEEEEEeeHHH
Confidence 468899999999987654
No 90
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.85 E-value=2.6e-07 Score=98.06 Aligned_cols=242 Identities=15% Similarity=0.177 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHhcCCCC--CCcCEEEEeecCC--------------------C--------CCc-cHHHHHHHHcCCCCC
Q 009935 185 VMFGAIDELLSKTGVKA--KDIGILVVNCSLF--------------------C--------PTP-SLSAMIVNHYKLRGN 233 (522)
Q Consensus 185 l~~~Aa~~aL~~agi~p--~dID~LI~~~s~~--------------------~--------~~P-s~a~~I~~~LGl~~~ 233 (522)
++..|+++||+++|+++ +++++++-.+... . ..| ..+..|...+|++
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~-- 136 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ-- 136 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC--
Confidence 45689999999999964 5565554322110 0 122 2467789999997
Q ss_pred eeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecc-cccc----cc----------cC--CCccccccccccccc
Q 009935 234 ITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMEN-ITLN----WY----------FG--NDRSMLVSNCLFRMG 296 (522)
Q Consensus 234 ~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~-~s~~----~~----------~~--~dr~~l~~~~lfgDG 296 (522)
-+++.+.+ +|++++.||..|.++|+.+..+.+||.++|. .+.. +. .+ .+|+ ..++|||
T Consensus 137 Gp~~ti~~-aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~----G~v~gEG 211 (381)
T PRK05952 137 GPVLAPMA-ACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQRE----GLVLGEG 211 (381)
T ss_pred Cccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCC----Ccccccc
Confidence 57889995 9999999999999999999999999999996 3321 00 00 1222 3689999
Q ss_pred eEEEEEecCCCcccc-cc-c-eeeeEEEEEecCCCCccceeeeccCCCcccccccchhhHHHHHHhhhhcccccCCcccc
Q 009935 297 GAAILLSNRSSDRRR-SK-Y-QLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLP 373 (522)
Q Consensus 297 AAAvLLs~~~~~~~~-a~-~-~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~lgp~vlp 373 (522)
|+++||++.....++ ++ | ++.+. ...+|+... ..+ + + .++
T Consensus 212 aa~lvLe~~~~A~~rg~~i~a~I~g~---~~~~d~~~~---~~~-~-------------~--~~~--------------- 254 (381)
T PRK05952 212 GAILVLESAELAQKRGAKIYGQILGF---GLTCDAYHM---SAP-E-------------P--DGK--------------- 254 (381)
T ss_pred EEEEEEeeHHHHHhCCCceEEEEEEE---EecCCCCCC---CCC-C-------------C--CHH---------------
Confidence 999999976532211 11 2 22221 122222110 000 0 0 000
Q ss_pred hhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHH-----HHHHcCCCcccccccccccccccccccc
Q 009935 374 MSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE-----LEKNLELSEWHMEPSRMTLYRFGNTSSS 448 (522)
Q Consensus 374 ~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~-----i~~~Lgl~~e~~~~S~~tl~r~GNtsSa 448 (522)
. .....++.++. .+...+|||++..|..+...-|. +.+.++ +++. -..+=..+||+.++
T Consensus 255 ---~----~~~ai~~Al~~-----agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~-v~s~K~~~GH~~~A 318 (381)
T PRK05952 255 ---S----AIAAIQQCLAR-----SGLTPEDIDYIHAHGTATRLNDQREANLIQALFP---HRVA-VSSTKGATGHTLGA 318 (381)
T ss_pred ---H----HHHHHHHHHHH-----hCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCe-eecchhhhccChHH
Confidence 0 00011233332 22235799999999887765544 344444 1221 01233468999999
Q ss_pred hHHHHHHHH---HHcCCCCC---------------------CCEEEEEEeChhHhhhheeeE
Q 009935 449 SLWYELAYS---EAKGRMRK---------------------GDRTWQIAFGSGFKCNSAVWQ 486 (522)
Q Consensus 449 si~~~La~~---~~~g~l~~---------------------Gd~VlliafGsG~~~~s~v~r 486 (522)
+-.+++... +++|.+.+ =++++..+||-|-.-.++|++
T Consensus 319 aG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 319 SGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred HHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 877777543 33444322 246778888888777777765
No 91
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.85 E-value=1e-06 Score=93.82 Aligned_cols=206 Identities=15% Similarity=0.071 Sum_probs=125.1
Q ss_pred ccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccccccc--------------ccC--
Q 009935 218 PSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNW--------------YFG-- 281 (522)
Q Consensus 218 Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~--------------~~~-- 281 (522)
++.+..|+..||++ -.++.++. +|++++.||..|.++|++|..+++||+++|..+... ..+
T Consensus 137 ~~~a~~ia~~lgl~--Gp~~~i~~-acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLS--GPAYTIST-ACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCC--CCcccccC-hhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 35788999999997 47888985 999999999999999999999999999999654310 001
Q ss_pred CCccccccccccccceEEEEEecCCCccccccceeeeEEEEEecCCCCccceeeeccCCCcccccccchhhHHHHHHhhh
Q 009935 282 NDRSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALK 361 (522)
Q Consensus 282 ~dr~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~ 361 (522)
.+++ ..++|||++++||++.... ..++.+. -...|... ...+ + |. +.
T Consensus 214 ~~~~----G~~~gEGaa~vVLe~~~~~----~~~I~g~---g~~~d~~~---~~~~-~-------------~~--~~--- 260 (392)
T PRK09185 214 ANRD----GINIGEAAAFFLLEREDDA----AVALLGV---GESSDAHH---MSAP-H-------------PE--GL--- 260 (392)
T ss_pred CCCC----ccceeceEEEEEEEEcCCC----cEEEEEE---EEeCCCCC---CCCC-C-------------CC--HH---
Confidence 1122 3689999999999987321 1233332 11222211 0000 0 00 00
Q ss_pred hcccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHHHH-----HHHHcCCCcccccccc
Q 009935 362 TNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE-----LEKNLELSEWHMEPSR 436 (522)
Q Consensus 362 ~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl~~-----i~~~Lgl~~e~~~~S~ 436 (522)
.. ....++.++. .+...+|||++..|-.+...-|. +.+.++-.. .+.
T Consensus 261 ---------------~~----~~a~~~Al~~-----Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv~--- 312 (392)
T PRK09185 261 ---------------GA----ILAMQQALAD-----AGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PCS--- 312 (392)
T ss_pred ---------------HH----HHHHHHHHHH-----cCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-cee---
Confidence 00 0012233332 23335899999999987664333 445554211 121
Q ss_pred cccccccccccchHHHHHHHHH---HcCCCC------------------------CCCEEEEEEeChhHhhhheeeEE
Q 009935 437 MTLYRFGNTSSSSLWYELAYSE---AKGRMR------------------------KGDRTWQIAFGSGFKCNSAVWQA 487 (522)
Q Consensus 437 ~tl~r~GNtsSasi~~~La~~~---~~g~l~------------------------~Gd~VlliafGsG~~~~s~v~r~ 487 (522)
.+=..+||+.+++-.++|.... +.|.+. +-++++..+||-|-.-.+++++.
T Consensus 313 s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 313 STKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred CCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 2223579999998777765432 222211 13567888899888877787764
No 92
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.83 E-value=1.3e-08 Score=108.14 Aligned_cols=90 Identities=13% Similarity=0.083 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCC--CccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCP--TPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.+|+.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.+|+. +.+++++.+ ||+++..++..|...+++
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~-~gasG~~al~~A~~~I~s 107 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVYV-GGATGVMTAIAGWYHVAS 107 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEec-CchhHHHHHHHHHHHHhC
Confidence 3566999999999999999999999987644322 566888899999997 588999995 898899999999999999
Q ss_pred CCCCeEEEEEeccc
Q 009935 261 HPNSYALVVSMENI 274 (522)
Q Consensus 261 ~~~~~aLVVs~E~~ 274 (522)
|..++||||+.|+.
T Consensus 108 G~ad~vLVvg~e~~ 121 (392)
T PRK06065 108 GLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCEEEEEEeecc
Confidence 99999999999974
No 93
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.83 E-value=7.4e-07 Score=96.26 Aligned_cols=121 Identities=13% Similarity=0.048 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCC-----CcCEEEEeecCCC------------------C--------Cc-cHHHHHHHHcC
Q 009935 182 AEMVMFGAIDELLSKTGVKAK-----DIGILVVNCSLFC------------------P--------TP-SLSAMIVNHYK 229 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~-----dID~LI~~~s~~~------------------~--------~P-s~a~~I~~~LG 229 (522)
...++..|+.++|+++|+++. +...++++++... . .+ ..+.+|...||
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457889999999999998542 3455666643110 0 11 24678999999
Q ss_pred CCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c-----------------ccCCCcccc
Q 009935 230 LRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLN-----W-----------------YFGNDRSML 287 (522)
Q Consensus 230 l~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~-----~-----------------~~~~dr~~l 287 (522)
++ -.++.+++ +|++++.||..|.++|++|..+.+||.++|..... + ..+-|+..
T Consensus 173 l~--Gp~~tv~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAVT-ACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--CceeceeC-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 87 67888985 99999999999999999999999999988863210 0 00001100
Q ss_pred ccccccccceEEEEEecCCC
Q 009935 288 VSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 288 ~~~~lfgDGAAAvLLs~~~~ 307 (522)
..+..||||+|+||++...
T Consensus 249 -~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 -DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred -CCeeeecCEEEEEEeeHHH
Confidence 2467899999999997553
No 94
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.82 E-value=3.3e-07 Score=98.45 Aligned_cols=252 Identities=13% Similarity=0.078 Sum_probs=146.8
Q ss_pred HHHHHHHHHHHHHHhcCCC-CCCcCE----EEEeecCCC------------------C--------Cc-cHHHHHHHHcC
Q 009935 182 AEMVMFGAIDELLSKTGVK-AKDIGI----LVVNCSLFC------------------P--------TP-SLSAMIVNHYK 229 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~-p~dID~----LI~~~s~~~------------------~--------~P-s~a~~I~~~LG 229 (522)
..+++..|++++|+++|++ +++++. +++.++... . .+ ..+..|...||
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 4567799999999999998 666653 233322110 0 11 24677888899
Q ss_pred CCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccccccc----------c------------c--CCCcc
Q 009935 230 LRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNW----------Y------------F--GNDRS 285 (522)
Q Consensus 230 l~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~----------~------------~--~~dr~ 285 (522)
++ -+++.++. +|++++.||..|.++|++|..+.+||.++|.....+ . . ..++
T Consensus 157 l~--Gp~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~- 232 (421)
T PTZ00050 157 LK--GPSGSAVT-ACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR- 232 (421)
T ss_pred CC--Cccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC-
Confidence 97 57788885 999999999999999999999999999999632100 0 0 0112
Q ss_pred ccccccccccceEEEEEecCCCccccccceeeeEEEE-EecCCCCccceeeeccCCCcccccccchhhHHHHHHhhhhcc
Q 009935 286 MLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRT-HKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNI 364 (522)
Q Consensus 286 ~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t-~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni 364 (522)
...+.||||+|+||++.....++. -++...+.. -...|+.. ...+. + .+
T Consensus 233 ---~G~~~gEGAaalvLe~~~~A~~~g-~~i~a~i~g~~~~~d~~~---~~~p~--------------~--~~------- 282 (421)
T PTZ00050 233 ---AGFVMGEGAGILVLEELEHALRRG-AKIYAEIRGYGSSSDAHH---ITAPH--------------P--DG------- 282 (421)
T ss_pred ---CCEeeccceEEEEEeeHHHHHHCC-CeEEEEEEEEEEcCCCCC---CCCCC--------------C--Ch-------
Confidence 246789999999998765422111 122222211 11112110 00000 0 00
Q ss_pred cccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHH-----HHHHHHcCCCc-ccccccccc
Q 009935 365 TTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVL-----DELEKNLELSE-WHMEPSRMT 438 (522)
Q Consensus 365 ~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl-----~~i~~~Lgl~~-e~~~~S~~t 438 (522)
+.. ....++.++.+ .+...+|||++.+|..+...- +.+.+.++-.. +.+. --.+
T Consensus 283 -----------~~~----~~ai~~Al~~~----Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~-v~s~ 342 (421)
T PTZ00050 283 -----------RGA----RRCMENALKDG----ANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLY-VSST 342 (421)
T ss_pred -----------HHH----HHHHHHHHHhc----cCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCce-EECc
Confidence 000 00123344430 122257999999998877443 34455555322 2221 0122
Q ss_pred cccccccccchHHHHHHHH---HHcCCCC--------------------------CCCEEEEEEeChhHhhhheeeEE
Q 009935 439 LYRFGNTSSSSLWYELAYS---EAKGRMR--------------------------KGDRTWQIAFGSGFKCNSAVWQA 487 (522)
Q Consensus 439 l~r~GNtsSasi~~~La~~---~~~g~l~--------------------------~Gd~VlliafGsG~~~~s~v~r~ 487 (522)
=..+||+.+++-.++|... +++|.+. +=.+++..+||-|-.-.++|++.
T Consensus 343 K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 343 KGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred cccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 3368999988877777543 3333321 11467888899888877888763
No 95
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.82 E-value=2e-08 Score=101.39 Aligned_cols=95 Identities=16% Similarity=0.235 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.++|+..|++++|++++++|++||.||++|. +....+..+..+.-..|++.+++++.++ +.|++|+.|+..|...+++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhcC
Confidence 5677799999999999999999999999974 4444777888888899998889999999 5999999999999999999
Q ss_pred CCCCeEEEEEecccccc
Q 009935 261 HPNSYALVVSMENITLN 277 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~~ 277 (522)
|..+.+|+++.|.+|..
T Consensus 105 G~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 105 GEADVVLAGGVESMSRV 121 (264)
T ss_dssp TS-SEEEEEEEEETTTS
T ss_pred CCccEEEEecccccccc
Confidence 99999999999999873
No 96
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.72 E-value=2.4e-06 Score=91.41 Aligned_cols=185 Identities=11% Similarity=0.184 Sum_probs=111.2
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccC--CChhhHHHHHHHHHHhCCccEEeecCCccC-CCCCccHHHHHHHH
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGC--FSEENLAFQKKILERSGLGQHTYFPEAVLR-VPPNPCMAEARNEA 182 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~--~~~e~~~f~~ki~~~sGi~er~~~~~~~~~-~~~~~~ma~~~~ea 182 (522)
++|.|.++|..-|- -.+.+++.+.+.. |. +.+-. -+...++..+.....+... ..............
T Consensus 2 ~rVvITG~G~vsp~---G~~~~~~w~~l~~-G~sgi~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~ 71 (406)
T PRK07967 2 RRVVITGLGIVSSI---GNNQQEVLASLRE-GRSGITFSP------EFAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDA 71 (406)
T ss_pred CcEEEEcceEECCC---CCCHHHHHHHHHc-CCCceeECC------cccccCCCCceEEEcCCChhhcCCHHHhhcCCHH
Confidence 57999999999987 3677887776532 11 00000 0111222222111110000 00000000011124
Q ss_pred HHHHHHHHHHHHHhcCCCCCC-----cCEEEEeecCC------------------C--------CCc-cHHHHHHHHcCC
Q 009935 183 EMVMFGAIDELLSKTGVKAKD-----IGILVVNCSLF------------------C--------PTP-SLSAMIVNHYKL 230 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~d-----ID~LI~~~s~~------------------~--------~~P-s~a~~I~~~LGl 230 (522)
..++..|++++|+++|+++++ +++++-.+... . ..| ..+..|...||+
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l 151 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKI 151 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCC
Confidence 567889999999999987543 44443222110 0 111 257889999999
Q ss_pred CCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccccc---------------------cC--CCcccc
Q 009935 231 RGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWY---------------------FG--NDRSML 287 (522)
Q Consensus 231 ~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~~---------------------~~--~dr~~l 287 (522)
+ -+++.++. +|++++.||..|.++|+.|..+.+||.++|..+..+. .+ .+|+
T Consensus 152 ~--Gp~~tvs~-aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~-- 226 (406)
T PRK07967 152 K--GVNYSISS-ACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRD-- 226 (406)
T ss_pred C--CCcccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCC--
Confidence 7 56788885 9999999999999999999999999999987543110 00 1122
Q ss_pred ccccccccceEEEEEecCCC
Q 009935 288 VSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 288 ~~~~lfgDGAAAvLLs~~~~ 307 (522)
..+.|+||+++||++.+.
T Consensus 227 --G~v~gEGaa~lvLe~~~~ 244 (406)
T PRK07967 227 --GFVIAGGGGVVVVEELEH 244 (406)
T ss_pred --ceeeeceEEEEEEeeHHH
Confidence 367899999999987543
No 97
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.72 E-value=3.3e-06 Score=90.75 Aligned_cols=316 Identities=13% Similarity=0.080 Sum_probs=173.3
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHhhhccC--CChhhHHHHHHHHHHhCCccEE--eecCCccCCCCCccHHHHH--
Q 009935 106 RKVYLVDFACYKPEPERQCTREIFMERSEQIGC--FSEENLAFQKKILERSGLGQHT--YFPEAVLRVPPNPCMAEAR-- 179 (522)
Q Consensus 106 ~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~--~~~e~~~f~~ki~~~sGi~er~--~~~~~~~~~~~~~~ma~~~-- 179 (522)
++|.|.|+|+-.|- -.+.++|.+.+.. |. +.+-.. + ...+.++..+. .++.+.. +..+-.+++
T Consensus 12 ~~VvItGig~~sp~---g~~~~~~w~~L~~-G~s~i~~~~~-~---~~~~~~~~~~~~g~i~~~~d---~~~~~~~~~~~ 80 (418)
T PRK07910 12 PNVVVTGIAMTTAL---ATDAETTWKLLLD-GQSGIRTLDD-P---FVEEFDLPVRIGGHLLEEFD---HQLTRVELRRM 80 (418)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CCCeeEeCCh-h---hhhccCCCcceEEEeccCcc---ccCCHHHHhhc
Confidence 58999999999987 4688888887642 21 010000 0 01112222221 1111110 001111122
Q ss_pred HHHHHHHHHHHHHHHHhcCC---CCCCcCEEEEeecCCC-------------------------CCc-cHHHHHHHHcCC
Q 009935 180 NEAEMVMFGAIDELLSKTGV---KAKDIGILVVNCSLFC-------------------------PTP-SLSAMIVNHYKL 230 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~agi---~p~dID~LI~~~s~~~-------------------------~~P-s~a~~I~~~LGl 230 (522)
.....++..|++++|+++|+ +++++++++-.+.... ..| ..+..|...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 23456889999999999996 4566665543321100 011 246677888888
Q ss_pred CCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c------cc-----CC------Cccccc
Q 009935 231 RGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLN-----W------YF-----GN------DRSMLV 288 (522)
Q Consensus 231 ~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~-----~------~~-----~~------dr~~l~ 288 (522)
+ -.++.++. +|++++.||..|.++|+.|..+.++|.++|..... + .. +. |+. =
T Consensus 161 ~--G~~~ti~t-aCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~--~ 235 (418)
T PRK07910 161 K--AGVITPVS-ACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKD--R 235 (418)
T ss_pred C--CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCC--C
Confidence 6 45677785 99999999999999999999999999999974210 0 10 00 110 0
Q ss_pred cccccccceEEEEEecCCCccccccceeeeE-EEEEecCCCCccceeeeccCCCcccccccchhhHHHHHHhhhhccccc
Q 009935 289 SNCLFRMGGAAILLSNRSSDRRRSKYQLIHT-VRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTL 367 (522)
Q Consensus 289 ~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~-v~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ni~~l 367 (522)
...++|+|++++||++.....++ +.++... ......+|+... ..+ +.. +
T Consensus 236 ~G~v~gEGaa~vvLe~~~~A~~r-g~~i~a~i~g~~~~~dg~~~---~~~-~~~---------------~---------- 285 (418)
T PRK07910 236 DGFVFGEGGALMVIETEEHAKAR-GANILARIMGASITSDGFHM---VAP-DPN---------------G---------- 285 (418)
T ss_pred CCEeeeceEEEEEEeeHHHHHhC-CCcEEEEEEEEEEecCCCCC---CCC-CCC---------------H----------
Confidence 24789999999999976543221 1122221 222222332210 000 000 0
Q ss_pred CCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHH-----HHHHHHHcCCCcccccccccccccc
Q 009935 368 GPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAV-----LDELEKNLELSEWHMEPSRMTLYRF 442 (522)
Q Consensus 368 gp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~v-----l~~i~~~Lgl~~e~~~~S~~tl~r~ 442 (522)
+. .....++.++. .+...+|||++..|..+... .+.+.+.+|-..-.+ ..+=..+
T Consensus 286 --------~~----~~~a~~~Al~~-----agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v---~s~K~~~ 345 (418)
T PRK07910 286 --------ER----AGHAMTRAIEL-----AGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV---YAPKSAL 345 (418)
T ss_pred --------HH----HHHHHHHHHHH-----hCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce---eCccccc
Confidence 00 00011233332 22335899999999987654 345666777321112 1234568
Q ss_pred cccccchHHHHHHH---HHHcCCC----------------------CC--CCEEEEEEeChhHhhhheeeEE
Q 009935 443 GNTSSSSLWYELAY---SEAKGRM----------------------RK--GDRTWQIAFGSGFKCNSAVWQA 487 (522)
Q Consensus 443 GNtsSasi~~~La~---~~~~g~l----------------------~~--Gd~VlliafGsG~~~~s~v~r~ 487 (522)
||+.+++-.++|.. ++++|.+ ++ -.+++.-+||-|-+-.++|++.
T Consensus 346 GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 346 GHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred cccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEec
Confidence 99999887777543 2333321 11 1356677888887777777763
No 98
>PRK06158 thiolase; Provisional
Probab=98.69 E-value=5.6e-08 Score=103.24 Aligned_cols=85 Identities=15% Similarity=0.047 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHP 262 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~ 262 (522)
.+|+.+|++++|+++|++++|||.+|+++. +...|+ ..+++++|++ ..+++++. .||+++..++..|..++++|.
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcCC
Confidence 356699999999999999999999998753 233443 5799999998 57889998 499999999999999999999
Q ss_pred CCeEEEE-Eec
Q 009935 263 NSYALVV-SME 272 (522)
Q Consensus 263 ~~~aLVV-s~E 272 (522)
.++|||+ +.|
T Consensus 104 ~d~vLV~~g~~ 114 (384)
T PRK06158 104 CDVALICYGSN 114 (384)
T ss_pred CCEEEEeeccc
Confidence 9999998 444
No 99
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.68 E-value=1e-07 Score=101.69 Aligned_cols=94 Identities=12% Similarity=0.176 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhc-CCCCCCcCEEEEeecC--CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKT-GVKAKDIGILVVNCSL--FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLL 258 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~a-gi~p~dID~LI~~~s~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL 258 (522)
+++|+..|++++|+|. |++|++||.+|+.|.. ....+..+..+....||+.+++++.++ +.|++++.|+.+|.+.+
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHHH
Confidence 4567799999999984 9999999999998753 222377889999999999789999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009935 259 QVHPNSYALVVSMENITL 276 (522)
Q Consensus 259 ~~~~~~~aLVVs~E~~s~ 276 (522)
++|..+.+|+++.|.+|+
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999986
No 100
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.68 E-value=8.2e-08 Score=102.11 Aligned_cols=92 Identities=18% Similarity=0.199 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CC--CCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSL-FC--PTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~-~~--~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
.+|+.+|++++|+++|++++|||.||++++. .. ..+..+..+...+|++ .+++++++ ++|++++.||.+|.++++
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I~ 100 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAIE 100 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHHH
Confidence 4677999999999999999999999987642 11 1111222344566876 78899999 599999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009935 260 VHPNSYALVVSMENITL 276 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~s~ 276 (522)
+|..+++||++.|..|.
T Consensus 101 sG~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 101 AGRARIVLVVGAEKMTA 117 (389)
T ss_pred CCCCCEEEEEEehhhcc
Confidence 99999999999998763
No 101
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.67 E-value=7.5e-08 Score=103.67 Aligned_cols=94 Identities=13% Similarity=0.175 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC-CCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSLF-CPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.++|+..|++++|+++|++|++||.+|+++... ...+.++.+++..+|++..++++.++ ++|++++.|+..|...+++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHC
Confidence 356679999999999999999999999997532 22355677799999998669999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+.+||++.|.+|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999999885
No 102
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.66 E-value=1.1e-07 Score=101.74 Aligned_cols=92 Identities=12% Similarity=0.176 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHhc-CCCCCCcCEEEEeec-CC-CCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 183 EMVMFGAIDELLSKT-GVKAKDIGILVVNCS-LF-CPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~a-gi~p~dID~LI~~~s-~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
.+|+.+|++++|+++ |++|+|||.+|+++. ++ ...+..+..++..+|++ +++++.++. +|+++..++..|.+.++
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~~-~caSG~~av~~Aa~~I~ 105 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVNR-YCSSSLQTTRMAFHAIK 105 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeeec-cchhHHHHHHHHHHHHH
Confidence 466799999999996 999999999998753 22 22356678899999996 689999994 99999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009935 260 VHPNSYALVVSMENITL 276 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~s~ 276 (522)
+|..+.+||++.|.+|.
T Consensus 106 sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 106 AGEGDVFISAGVETVSR 122 (406)
T ss_pred CCCCCEEEEeeEEeccc
Confidence 99999999999998765
No 103
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1e-07 Score=101.82 Aligned_cols=90 Identities=21% Similarity=0.200 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCC-----ccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHH
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPT-----PSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQ 256 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~-----Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~ 256 (522)
.+|+.+|++++|+++|++|+|||.+|++++ +++.. |+....++ .++. +++++++++ +|++++.||..|..
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~~-~Casg~~al~~Aa~ 102 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHEA-ACASGSVATLAAMA 102 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeeccc-ccHHHHHHHHHHHH
Confidence 355699999999999999999999998753 44322 23333233 2443 467999995 99999999999999
Q ss_pred HHHcCCCCeEEEEEeccccc
Q 009935 257 LLQVHPNSYALVVSMENITL 276 (522)
Q Consensus 257 lL~~~~~~~aLVVs~E~~s~ 276 (522)
++++|..++|||+++|..+.
T Consensus 103 ~I~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 103 DLRAGRYDVALVVGVELMKT 122 (403)
T ss_pred HHHcCCCCEEEEEEEEecCC
Confidence 99999999999999998653
No 104
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.62 E-value=1.7e-07 Score=93.03 Aligned_cols=122 Identities=21% Similarity=0.323 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCC------cCEEEEeecCCC-----------------C------Cc-cHHHHHHHHcCC
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKD------IGILVVNCSLFC-----------------P------TP-SLSAMIVNHYKL 230 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~d------ID~LI~~~s~~~-----------------~------~P-s~a~~I~~~LGl 230 (522)
....++..|+.+||+++|+++++ +++++-++..++ + .| ..+..|+..||+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 46789999999999999999853 444443322210 1 22 257899999999
Q ss_pred CCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEec-ccccc---------cccCCCcccc----ccccccccc
Q 009935 231 RGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSME-NITLN---------WYFGNDRSML----VSNCLFRMG 296 (522)
Q Consensus 231 ~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E-~~s~~---------~~~~~dr~~l----~~~~lfgDG 296 (522)
+ -+++.+++ +|++++.||..|.++|+.|..+.+||.++| .++.. ....+++... =...++|+|
T Consensus 166 ~--G~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~gEG 242 (254)
T PF00109_consen 166 R--GPSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLGEG 242 (254)
T ss_dssp ---SSEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB-E
T ss_pred C--Cccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEEECc
Confidence 7 56778886 999999999999999999999999999999 44431 1111111000 034799999
Q ss_pred eEEEEEecC
Q 009935 297 GAAILLSNR 305 (522)
Q Consensus 297 AAAvLLs~~ 305 (522)
|+++||++.
T Consensus 243 a~~~vLe~~ 251 (254)
T PF00109_consen 243 AGALVLERL 251 (254)
T ss_dssp EEEEEEEEH
T ss_pred eEEEEEEEh
Confidence 999999763
No 105
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.62 E-value=1.8e-07 Score=99.47 Aligned_cols=94 Identities=12% Similarity=0.203 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCC-CccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSL-FCP-TPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
+.+|+.+|++++|+++|++|+|||.+++.|.. ... ....+..+....|++.+++++.++ ++|++|+.|+..|.+.++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 45677999999999999999999999998753 222 234566777889998679999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009935 260 VHPNSYALVVSMENITL 276 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~s~ 276 (522)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999986
No 106
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.61 E-value=1.8e-07 Score=99.92 Aligned_cols=94 Identities=12% Similarity=0.186 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHh-cCCCCCCcCEEEEeecC--CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSK-TGVKAKDIGILVVNCSL--FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLL 258 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~-agi~p~dID~LI~~~s~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL 258 (522)
.++|+..|++++|++ +|++|++||.+|+.+.. ....+..+..+....|++.+++++.++ ++|++|..|+..|.+.+
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 456779999999996 69999999999998643 222356777899999998789999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009935 259 QVHPNSYALVVSMENITL 276 (522)
Q Consensus 259 ~~~~~~~aLVVs~E~~s~ 276 (522)
++|..+.+||++.|.+|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999999986
No 107
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.59 E-value=2.4e-07 Score=98.92 Aligned_cols=94 Identities=16% Similarity=0.224 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CC-CCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LF-CPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
.++|+.+|++++|+++|++|+|||.+|+++. +. ...+..+..+....|++..++++.++ ++|++|+.|+..|.+.++
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHHH
Confidence 4577799999999999999999999999864 22 22355677788999998779999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 009935 260 VHPNSYALVVSMENITL 276 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~s~ 276 (522)
+|..+.+||++.|.+|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999999885
No 108
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.57 E-value=2.8e-07 Score=98.03 Aligned_cols=94 Identities=14% Similarity=0.225 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSL-FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
..+|+.+|++++|+++|++|+|||.+|+.+.. ....+..+..++..+|++.+++.+.++ .+|++++.++..|.+.+++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhc
Confidence 35667999999999999999999999987642 112334567789999998568899999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+.+||++.|.++.
T Consensus 105 G~~d~vla~G~e~ms~ 120 (388)
T PRK06366 105 GERDLVIAGGMENMSN 120 (388)
T ss_pred CCCCEEEEEeeEcccc
Confidence 9999999988898774
No 109
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.57 E-value=2.7e-07 Score=98.50 Aligned_cols=94 Identities=15% Similarity=0.191 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHh-cCCCCCCcCEEEEeecC--CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSK-TGVKAKDIGILVVNCSL--FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLL 258 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~-agi~p~dID~LI~~~s~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL 258 (522)
+++|+..|++++|++ +|++|+|||.+|+.+.. ....+..+..+...+|++.+++++.++ ++|++|+.|+..|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHH
Confidence 456779999999996 69999999999998642 222366778899999998779999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009935 259 QVHPNSYALVVSMENITL 276 (522)
Q Consensus 259 ~~~~~~~aLVVs~E~~s~ 276 (522)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999985
No 110
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.54 E-value=2.9e-07 Score=99.15 Aligned_cols=94 Identities=15% Similarity=0.175 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSL-FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
..+|+.+|++++|+++|++|++||.+|+.+.. ....+.++..+.-..|++..++++.++ ++|++|+.|+.+|.+.+++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHC
Confidence 45677999999999999999999999998643 222345666666668998779999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+.+|+++.|.+|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999985
No 111
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.51 E-value=5.4e-07 Score=96.17 Aligned_cols=92 Identities=20% Similarity=0.183 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecC-CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSL-FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
.+|+.+|++++|+++|++++|||.+++++.. .+........+.+.+|++ ..+++.+. ++|++++.++..|...+++|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~sG 105 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVASG 105 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHCC
Confidence 4667999999999999999999999987642 121122236688899998 58899999 59999999999999999999
Q ss_pred CCCeEEEEEeccccc
Q 009935 262 PNSYALVVSMENITL 276 (522)
Q Consensus 262 ~~~~aLVVs~E~~s~ 276 (522)
..+.+||++.|..+.
T Consensus 106 ~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 106 AYDIALALGVEKLKD 120 (398)
T ss_pred CCCEEEEEEEeeccc
Confidence 999999999998753
No 112
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.50 E-value=1.6e-06 Score=90.74 Aligned_cols=118 Identities=11% Similarity=0.085 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHhcCC--CCCCcCEEEEeecCC-----------------CCCc---------cHHHHHHHHcCCCCCe
Q 009935 183 EMVMFGAIDELLSKTGV--KAKDIGILVVNCSLF-----------------CPTP---------SLSAMIVNHYKLRGNI 234 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi--~p~dID~LI~~~s~~-----------------~~~P---------s~a~~I~~~LGl~~~~ 234 (522)
..++..|++++++++|+ +++++++++-.+... ...| ..+.+|...||++ -
T Consensus 5 ~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~--G 82 (342)
T PRK14691 5 WRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK--G 82 (342)
T ss_pred HHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC--C
Confidence 45568999999999995 677887776443111 0011 3578888999997 5
Q ss_pred eEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c-----cc--------------CCCccccccc
Q 009935 235 TSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLN-----W-----YF--------------GNDRSMLVSN 290 (522)
Q Consensus 235 ~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~-----~-----~~--------------~~dr~~l~~~ 290 (522)
+++.++. +|++++.||..|.++|+.|..+.+||.++|..... | .. ..+|+ .
T Consensus 83 p~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~----G 157 (342)
T PRK14691 83 PIGAPVT-ACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD----G 157 (342)
T ss_pred Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC----C
Confidence 7788885 99999999999999999999999999999873210 0 00 01122 4
Q ss_pred cccccceEEEEEecCCC
Q 009935 291 CLFRMGGAAILLSNRSS 307 (522)
Q Consensus 291 ~lfgDGAAAvLLs~~~~ 307 (522)
.++||||+++||++...
T Consensus 158 ~v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 158 FVMGEGAGLLIIEELEH 174 (342)
T ss_pred ccccceEEEEEEeeHHH
Confidence 68899999999987654
No 113
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.49 E-value=4.9e-07 Score=96.16 Aligned_cols=94 Identities=11% Similarity=0.144 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHh-cCCCCCCcCEEEEeecCC-CC-CccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSK-TGVKAKDIGILVVNCSLF-CP-TPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLL 258 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~-agi~p~dID~LI~~~s~~-~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL 258 (522)
.++|+..+++++|++ +|++|+|||.+|+++... .. .+..+..+....|++.+++++.++ ++|++|+.|+.+|...+
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHH
Confidence 356779999999997 699999999999987532 22 244566788899998679999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009935 259 QVHPNSYALVVSMENITL 276 (522)
Q Consensus 259 ~~~~~~~aLVVs~E~~s~ 276 (522)
++|..+.+||++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999999875
No 114
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.48 E-value=5.3e-06 Score=83.67 Aligned_cols=116 Identities=23% Similarity=0.270 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCC
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPN 263 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~ 263 (522)
.|..+|++.+|+|++++++|||.++-.--....++ +++.++.|+++ -+.|.| +||...-+|.+|.-++..+-.
T Consensus 53 ~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~iP----f~Glyg-ACST~~e~l~laa~~vdgg~a 125 (329)
T PF07451_consen 53 KMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGIP----FLGLYG-ACSTMMESLALAAMLVDGGFA 125 (329)
T ss_dssp HHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCCC----ccchhh-HHHHHHHHHHHHHHHHhCCCc
Confidence 47789999999999999999999986644433333 57888888765 899998 999999999999999999989
Q ss_pred CeEEEEEeccccc---ccccC----CCccccccccccccceEEEEEecCCCc
Q 009935 264 SYALVVSMENITL---NWYFG----NDRSMLVSNCLFRMGGAAILLSNRSSD 308 (522)
Q Consensus 264 ~~aLVVs~E~~s~---~~~~~----~dr~~l~~~~lfgDGAAAvLLs~~~~~ 308 (522)
+++|+.++-.... .|..+ ..|.. +...---||+|+||++....
T Consensus 126 ~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~~ 175 (329)
T PF07451_consen 126 DYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGSG 175 (329)
T ss_dssp SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--S
T ss_pred ceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCCC
Confidence 9999987765542 22222 22321 23344578999999987653
No 115
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.46 E-value=8.9e-07 Score=95.58 Aligned_cols=93 Identities=26% Similarity=0.314 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCC--cCEEEEeecC---CCCCccHHHHHHHHcCCC------CCeeEEEecCCCchHHHHHH
Q 009935 183 EMVMFGAIDELLSKTGVKAKD--IGILVVNCSL---FCPTPSLSAMIVNHYKLR------GNITSYNLGGMGCSAGLISI 251 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~d--ID~LI~~~s~---~~~~Ps~a~~I~~~LGl~------~~~~~~dl~g~gCsggl~AL 251 (522)
++|+.+|++++|+++|++++| ||.+|+++.. +...+..+..+...+|++ ..++++.++. +|++++.|+
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~-~caSG~~Ai 127 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEG-ACASGGLAV 127 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEEC-cCHHHHHHH
Confidence 466799999999999999999 9999987642 112355566777665554 3688999994 999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeccccc
Q 009935 252 DLAKQLLQVHPNSYALVVSMENITL 276 (522)
Q Consensus 252 ~lA~~lL~~~~~~~aLVVs~E~~s~ 276 (522)
..|...+++|..+.+||++.|.+|.
T Consensus 128 ~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 128 QSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHCCCCCEEEEEEEeeccc
Confidence 9999999999999999999998775
No 116
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.46 E-value=9.6e-06 Score=86.60 Aligned_cols=185 Identities=16% Similarity=0.100 Sum_probs=111.4
Q ss_pred CCceEEEEEeEEeCCCCceecHHHHHHHhhhccCCChhhHHHHHHHH-HHhCC-ccEEeecCCccCCCCCccHHHHHHHH
Q 009935 105 PRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKIL-ERSGL-GQHTYFPEAVLRVPPNPCMAEARNEA 182 (522)
Q Consensus 105 ~~~v~Iv~~~~ylP~~~~~v~~~~~~e~~~~~~~~~~e~~~f~~ki~-~~sGi-~er~~~~~~~~~~~~~~~ma~~~~ea 182 (522)
+++|.|.|+|+--|- =.+.+++.+.+.. |+ +....+. .+.- ...+. ++- ..... .+..... ......
T Consensus 5 ~~rVvITGiG~vsp~---G~~~e~~w~aL~~-G~-sg~~~~~-~~~~~~~~~~~~~~---~~~~~-~~~~~~~-r~~~r~ 73 (398)
T PRK06519 5 PNDVVITGIGLVSSL---GEGLDAHWNALSA-GR-PQPNVDT-ETFAPYPVHPLPEI---DWSQQ-IPKRGDQ-RQMETW 73 (398)
T ss_pred CCCEEEEcceEECCC---CCCHHHHHHHHHc-CC-CCCCCCc-ccccCcCccccccc---Chhhc-CCchhhh-hccCHH
Confidence 568999999999886 4778888876642 21 1000000 0000 00000 000 00000 0000000 011234
Q ss_pred HHHHHHHHHHHHHhcCCCC-----CCcCEEEEeecCC--C---------------------------C--------Cc-c
Q 009935 183 EMVMFGAIDELLSKTGVKA-----KDIGILVVNCSLF--C---------------------------P--------TP-S 219 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p-----~dID~LI~~~s~~--~---------------------------~--------~P-s 219 (522)
..++..|++++|+++|+++ +++++++-.+... . . .| .
T Consensus 74 ~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~ 153 (398)
T PRK06519 74 QRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNL 153 (398)
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhH
Confidence 5678999999999999854 3455555443211 0 0 11 2
Q ss_pred HHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccc-cc---------cccc-----C-C-
Q 009935 220 LSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENI-TL---------NWYF-----G-N- 282 (522)
Q Consensus 220 ~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~-s~---------~~~~-----~-~- 282 (522)
.+..|...+|++ -+++.+++ +|++++.||..|.++|+.+..+.+||.++|.. +. .+.. + .
T Consensus 154 ~a~~is~~~gl~--Gp~~ti~~-acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~d 230 (398)
T PRK06519 154 LAGNISIVHKVT--GSSRTFMG-EESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWS 230 (398)
T ss_pred HHHHHHHHhCCC--CccccccC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCchhc
Confidence 467788999997 57888995 99999999999999999999999999999862 21 0010 0 1
Q ss_pred ----CccccccccccccceEEEEEecCCC
Q 009935 283 ----DRSMLVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 283 ----dr~~l~~~~lfgDGAAAvLLs~~~~ 307 (522)
+|+ ..+.|+||+++||++...
T Consensus 231 ~~~~~r~----G~v~GEGAa~lvLE~~~~ 255 (398)
T PRK06519 231 RGGEDGG----GFILGSGGAFLVLESREH 255 (398)
T ss_pred cCccCCC----CeeeeceEEEEEEeeHHH
Confidence 132 367899999999998654
No 117
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.45 E-value=7.5e-07 Score=96.00 Aligned_cols=91 Identities=15% Similarity=0.107 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC-CCCccHH-HHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLF-CPTPSLS-AMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~-~~~Ps~a-~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
++|+.+|+++||+++|++++|||.+|+++... ......+ ..++..+|++ .++++.+. .+|+++..++..|...|++
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~s 115 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIAS 115 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHHc
Confidence 46779999999999999999999988776332 2222333 3467999998 48999999 4999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 009935 261 HPNSYALVVSMENIT 275 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s 275 (522)
|..+.|||+++|..|
T Consensus 116 G~~~~vLv~G~e~~s 130 (430)
T PRK06365 116 GRMDCVAVYGFETMS 130 (430)
T ss_pred CCCCEEEEEEeeecc
Confidence 999999999999765
No 118
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.40 E-value=8.1e-07 Score=94.43 Aligned_cols=94 Identities=12% Similarity=0.130 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHh-cCCCCCCcCEEEEeecCC-CC-CccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSK-TGVKAKDIGILVVNCSLF-CP-TPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLL 258 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~-agi~p~dID~LI~~~s~~-~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL 258 (522)
+++|+.+|++++|++ +|++|++||.+|+++... .. .+..+..+....|++..++++.++ .+|++++.|+.+|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHH
Confidence 456779999999997 599999999999987532 11 244666666688998779999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009935 259 QVHPNSYALVVSMENITL 276 (522)
Q Consensus 259 ~~~~~~~aLVVs~E~~s~ 276 (522)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999999875
No 119
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.39 E-value=2e-05 Score=100.11 Aligned_cols=217 Identities=16% Similarity=0.133 Sum_probs=127.8
Q ss_pred HHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccccc-ccc---------cCC------C
Q 009935 220 LSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITL-NWY---------FGN------D 283 (522)
Q Consensus 220 ~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~-~~~---------~~~------d 283 (522)
.+.+|.++||++ -+++.+.. +|++++.||++|.+.|+.|..+.+||-+.+.... ..+ ..+ |
T Consensus 185 ~A~RIS~~f~L~--Gps~tVdt-ACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLG--GMNCVVDA-ACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCC--CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 478899999997 57889985 9999999999999999999999999988776321 100 000 1
Q ss_pred ccccccccccccceEEEEEecCCCccccccceeeeEEEEE-ecCCCCccceeeeccCCCcccccccchhhHHHHHHhhhh
Q 009935 284 RSMLVSNCLFRMGGAAILLSNRSSDRRRSKYQLIHTVRTH-KGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKT 362 (522)
Q Consensus 284 r~~l~~~~lfgDGAAAvLLs~~~~~~~~a~~~L~~~v~t~-~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~v~g~~l~~ 362 (522)
.+- ...++|+|+++++|.+-....+ .+-++..+++.. ..+|++. ..++. |...+
T Consensus 262 ~~a--dG~v~GEGag~vvLkrL~dA~~-dGd~IyAvI~G~g~~~DG~~-~~ita----------------P~~~g----- 316 (2582)
T TIGR02813 262 IDS--KGMMIGEGIGMMALKRLEDAER-DGDRIYAVIKGVGASSDGKF-KSIYA----------------PRPEG----- 316 (2582)
T ss_pred CCC--CcccccceEEEEEeCcHHHHHh-CCCcEEEEEEEEEEcCCCCC-CCCcC----------------CCHHH-----
Confidence 110 2468899999999987543211 112333333322 1222221 11110 11000
Q ss_pred cccccCCcccchhhhHHHHHHHHHHHHHHhhcccccccccccccEEEEcCCChHHH-----HHHHHHcCCCcc---cccc
Q 009935 363 NITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVL-----DELEKNLELSEW---HMEP 434 (522)
Q Consensus 363 ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~g~~vl-----~~i~~~Lgl~~e---~~~~ 434 (522)
| .++++.+++. .+...++|+++..|-.|..+- +.+.+.++-... .+ +
T Consensus 317 --------------q---------~~~i~~Al~~-Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~-~ 371 (2582)
T TIGR02813 317 --------------Q---------AKALKRAYDD-AGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHI-A 371 (2582)
T ss_pred --------------H---------HHHHHHHHHH-cCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCc-e
Confidence 0 1222322222 333358999999999776554 345566654321 11 1
Q ss_pred cccccccccccccchHHHHHHHH---HHcCCCC--------------------------------CC--CEEEEEEeChh
Q 009935 435 SRMTLYRFGNTSSSSLWYELAYS---EAKGRMR--------------------------------KG--DRTWQIAFGSG 477 (522)
Q Consensus 435 S~~tl~r~GNtsSasi~~~La~~---~~~g~l~--------------------------------~G--d~VlliafGsG 477 (522)
--.+=..+||+-+++=..+|... ++.|.+- .| .++..-+||-|
T Consensus 372 vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfG 451 (2582)
T TIGR02813 372 LGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFG 451 (2582)
T ss_pred eeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCC
Confidence 01122468999998887777542 2222210 11 36778889999
Q ss_pred HhhhheeeEEec
Q 009935 478 FKCNSAVWQALR 489 (522)
Q Consensus 478 ~~~~s~v~r~~~ 489 (522)
-+..+++++-..
T Consensus 452 GtN~hvvlee~~ 463 (2582)
T TIGR02813 452 GTNFHMVLEEYS 463 (2582)
T ss_pred CeeEEEEEeecC
Confidence 888889988653
No 120
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.34 E-value=2.4e-06 Score=92.03 Aligned_cols=94 Identities=17% Similarity=0.248 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC-CCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSLF-CPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
..+|+.+|++++|+++|++++|||.+|+++... ...+..+..+.-..|+....+++.++ ++|++++.++..|.+++++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHC
Confidence 356779999999999999999999999987432 11244556655566676568999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+.+||++.|.+|.
T Consensus 110 G~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 110 GQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCEEEEeeEEccCC
Confidence 9999999999999885
No 121
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.11 E-value=1.1e-05 Score=85.99 Aligned_cols=87 Identities=16% Similarity=0.066 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHP 262 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~ 262 (522)
.+|+.+|++++|+++|++++|||.+++++.. .+.....++..+|++ ..+..++. .||+++..++..|...+++|.
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcCC
Confidence 3567999999999999999999998753211 111124589999997 57888888 499999999999999999999
Q ss_pred CCeEEEEEeccc
Q 009935 263 NSYALVVSMENI 274 (522)
Q Consensus 263 ~~~aLVVs~E~~ 274 (522)
.+.||||+.|..
T Consensus 101 ~d~vLvvg~e~~ 112 (388)
T PRK08142 101 CSVALITLAGRP 112 (388)
T ss_pred CCEEEEEeeeec
Confidence 999999999864
No 122
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.02 E-value=3e-05 Score=85.11 Aligned_cols=91 Identities=13% Similarity=0.067 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHhcCCC--CCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 183 EMVMFGAIDELLSKTGVK--AKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~--p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
.+|+.+|++++|+++|++ ++|||.+++..............+++++|+.+ ....... .||+++..++..|...+++
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ias 105 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIAA 105 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHHC
Confidence 467799999999999999 99999998754321122234578999999974 4455555 5898999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 009935 261 HPNSYALVVSMENIT 275 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s 275 (522)
|..+.|||+++|..+
T Consensus 106 G~advVLv~G~E~~~ 120 (498)
T PRK08257 106 GEADVALVAGAEAQS 120 (498)
T ss_pred CCCCEEEEeeeeecc
Confidence 999999999999864
No 123
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.97 E-value=0.00057 Score=73.20 Aligned_cols=122 Identities=16% Similarity=0.209 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCC-CCCcC--EEE-EeecC---CC------------------------CCc-cHHHHHHHH
Q 009935 180 NEAEMVMFGAIDELLSKTGVK-AKDIG--ILV-VNCSL---FC------------------------PTP-SLSAMIVNH 227 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~agi~-p~dID--~LI-~~~s~---~~------------------------~~P-s~a~~I~~~ 227 (522)
.....++..|+++|++++|++ ..+++ +-+ +.++. .. ..| ..+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 345678899999999999998 34443 222 22321 10 022 246778889
Q ss_pred cCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecc-ccc--------------c-------ccc-CCCc
Q 009935 228 YKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMEN-ITL--------------N-------WYF-GNDR 284 (522)
Q Consensus 228 LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~-~s~--------------~-------~~~-~~dr 284 (522)
+|++ -..+.+++ +|+++..||..|.++|+.|..+.+++.++|. ++. . +.+ ..+|
T Consensus 149 ~g~~--G~~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~R 225 (412)
T COG0304 149 FGLK--GPNYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNR 225 (412)
T ss_pred hCCC--CCcCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCC
Confidence 9987 67888996 9999999999999999999999999999976 321 1 000 1234
Q ss_pred cccccccccccceEEEEEecCCCc
Q 009935 285 SMLVSNCLFRMGGAAILLSNRSSD 308 (522)
Q Consensus 285 ~~l~~~~lfgDGAAAvLLs~~~~~ 308 (522)
+ ..++|.||+++||+.....
T Consensus 226 d----Gfv~gEGag~lVLE~~ehA 245 (412)
T COG0304 226 D----GFVIGEGAGALVLEELEHA 245 (412)
T ss_pred C----CEEEecceeEEEecChhhH
Confidence 4 4689999999999886643
No 124
>PRK07855 lipid-transfer protein; Provisional
Probab=97.96 E-value=3.6e-05 Score=81.92 Aligned_cols=83 Identities=12% Similarity=0.066 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCC
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPN 263 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~ 263 (522)
+|+.+|++++|+++|++++|||.+++++.. ..+. ..+++.+|+++-....++.+ ||+++..++..|...+++|..
T Consensus 26 ~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~~-gg~sg~~~~~~A~~~I~sG~~ 100 (386)
T PRK07855 26 RLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIHY-GGGAACATVQQAAMAVATGVA 100 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeecC-CcHHHHHHHHHHHHHHHCCCC
Confidence 566999999999999999999999874322 1222 46889999974245568884 999999999999999999999
Q ss_pred CeEEEEEe
Q 009935 264 SYALVVSM 271 (522)
Q Consensus 264 ~~aLVVs~ 271 (522)
++|||+++
T Consensus 101 d~vLv~g~ 108 (386)
T PRK07855 101 DVVVCYRA 108 (386)
T ss_pred CEEEEEee
Confidence 99999987
No 125
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=97.70 E-value=0.00021 Score=75.99 Aligned_cols=87 Identities=11% Similarity=0.129 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHhcC-CCC-CCcCEEEEeecCCC-CCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHH
Q 009935 183 EMVMFGAIDELLSKTG-VKA-KDIGILVVNCSLFC-PTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~ag-i~p-~dID~LI~~~s~~~-~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
.+|+.+|++++|+++| +++ +|||.+++++.... ........++..+|+. ....+.+ |+++..++..|...++
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV~ 100 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHIN 100 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHHH
Confidence 4567999999999999 998 79999987542111 1112234567889985 2344444 7788999999999999
Q ss_pred cCCCCeEEEEEeccc
Q 009935 260 VHPNSYALVVSMENI 274 (522)
Q Consensus 260 ~~~~~~aLVVs~E~~ 274 (522)
+|..++|||++.|..
T Consensus 101 sG~~d~vLv~g~~~~ 115 (385)
T PRK06066 101 SGLANVVVVEAHSKP 115 (385)
T ss_pred cCCCCEEEEEEEeec
Confidence 999999999999864
No 126
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=97.68 E-value=0.00071 Score=68.43 Aligned_cols=91 Identities=15% Similarity=0.180 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeec--CCCCCccHHHHH-HHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNCS--LFCPTPSLSAMI-VNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~s--~~~~~Ps~a~~I-~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
+|...+.+..+++++++|+.|+-+++.+. +..- ...+++ +-.-|++..++..-++ --|++|+.|+.....-+++
T Consensus 63 eLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g--a~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir~ 139 (435)
T KOG1389|consen 63 ELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG--ASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIRA 139 (435)
T ss_pred HHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc--hHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHhc
Confidence 45588899999999999999999998853 3322 444444 4455888777777777 6999999999999999999
Q ss_pred CCCCeEEEEEecccccc
Q 009935 261 HPNSYALVVSMENITLN 277 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~~ 277 (522)
|.++-.|-.+.|.+|.+
T Consensus 140 G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 140 GFYDIGLAAGVESMTTN 156 (435)
T ss_pred Cceeeecccchhhhccc
Confidence 99999999999999875
No 127
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.52 E-value=0.00034 Score=74.63 Aligned_cols=94 Identities=20% Similarity=0.297 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHhc--CCCCCCcCEEEEeecC--CCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHH
Q 009935 183 EMVMFGAIDELLSKT--GVKAKDIGILVVNCSL--FCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLL 258 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~a--gi~p~dID~LI~~~s~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL 258 (522)
+++.....+..+++. ++++.+||.+|+.|.. ....+..+..++...|++.+++.+.++ .+|++++.|+..|...+
T Consensus 28 e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~I 106 (392)
T COG0183 28 EALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQAI 106 (392)
T ss_pred HHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHHH
Confidence 344455555555543 6888889999988743 235678889999999999779999999 59999999999999999
Q ss_pred HcCCCCeEEEEEecccccc
Q 009935 259 QVHPNSYALVVSMENITLN 277 (522)
Q Consensus 259 ~~~~~~~aLVVs~E~~s~~ 277 (522)
++|..+.+|+++.|++|..
T Consensus 107 ~sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 107 ASGEADVVLAGGVEKMSDA 125 (392)
T ss_pred HCCCCCEEEEEeeeeccCC
Confidence 9999999999999999974
No 128
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.45 E-value=0.0038 Score=74.51 Aligned_cols=122 Identities=16% Similarity=0.155 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCE----EEEee-cCCCCCc-------------------cHHHHHHHHcCCCCCeeEE
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGI----LVVNC-SLFCPTP-------------------SLSAMIVNHYKLRGNITSY 237 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~----LI~~~-s~~~~~P-------------------s~a~~I~~~LGl~~~~~~~ 237 (522)
-..|..+.+-++|+++|+.|+.+.. |..+. ..+|... -.+.+|.+.|+++ -+++
T Consensus 91 QqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~--GPs~ 168 (1061)
T COG3321 91 QQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLS--GPSV 168 (1061)
T ss_pred hHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCC--CCCc
Confidence 3458999999999999999998883 44443 3344322 1578899999997 7888
Q ss_pred EecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccccc--ccc--------cCCC--cc--ccccccccccceEEEEEe
Q 009935 238 NLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITL--NWY--------FGND--RS--MLVSNCLFRMGGAAILLS 303 (522)
Q Consensus 238 dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~--~~~--------~~~d--r~--~l~~~~lfgDGAAAvLLs 303 (522)
.|. .+||+.+.|+++|.+.|+.|..+.||+=+....-. .++ ..+. +. .--..+..|.|+++++|.
T Consensus 169 ~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLK 247 (1061)
T COG3321 169 TVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLK 247 (1061)
T ss_pred ccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEE
Confidence 998 59999999999999999999888887655544321 111 0000 00 001246889999999997
Q ss_pred cCC
Q 009935 304 NRS 306 (522)
Q Consensus 304 ~~~ 306 (522)
+-.
T Consensus 248 rl~ 250 (1061)
T COG3321 248 RLS 250 (1061)
T ss_pred EhH
Confidence 654
No 129
>PRK07937 lipid-transfer protein; Provisional
Probab=97.34 E-value=0.001 Score=70.07 Aligned_cols=87 Identities=15% Similarity=0.068 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc--cHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP--SLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P--s~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
+|+.+|++++|+++|++++|||.++.+++ +.... .....+...+|+.+......+.+ ++..++..|...+++|
T Consensus 26 el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~----~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 26 EMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVEM----DAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEecC----cHHHHHHHHHHHHhcC
Confidence 46699999999999999999998854333 21111 11234557788753445555553 4777999999999999
Q ss_pred CCCeEEEEEecccc
Q 009935 262 PNSYALVVSMENIT 275 (522)
Q Consensus 262 ~~~~aLVVs~E~~s 275 (522)
..++|||++.|..+
T Consensus 101 ~~d~VLv~g~~k~~ 114 (352)
T PRK07937 101 EVDTALVYGFGKSS 114 (352)
T ss_pred CCCEEEEEEecccC
Confidence 99999999999654
No 130
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.23 E-value=0.00081 Score=68.32 Aligned_cols=94 Identities=16% Similarity=0.122 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
+.+|+.-|++.+|+|++++|+|++-+|+.+. +-+.--..+.+.+=--||+-++.+..++ +.|++++.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 4556699999999999999999999998752 3333334455565566788889999999 8999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 009935 261 HPNSYALVVSMENITL 276 (522)
Q Consensus 261 ~~~~~aLVVs~E~~s~ 276 (522)
|..+.++.-+.|.+|.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999996
No 131
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=96.78 E-value=0.0028 Score=62.90 Aligned_cols=85 Identities=21% Similarity=0.307 Sum_probs=70.0
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCe
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSY 265 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~ 265 (522)
.+|+..+|++++++-++|+--++.- -.+. ....+-...+||. .++.||+++ .|+.|-.||-+|++++++|..+.
T Consensus 34 ~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesgn~dc 108 (408)
T KOG1406|consen 34 KEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESGNSDC 108 (408)
T ss_pred HHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcCCcce
Confidence 9999999999999999887654431 1111 1124455689998 799999997 99999999999999999999999
Q ss_pred EEEEEeccccc
Q 009935 266 ALVVSMENITL 276 (522)
Q Consensus 266 aLVVs~E~~s~ 276 (522)
||..+-|.+++
T Consensus 109 vlalgfekm~~ 119 (408)
T KOG1406|consen 109 VLALGFEKMER 119 (408)
T ss_pred EEeechhhhCC
Confidence 99999999876
No 132
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=95.97 E-value=0.0027 Score=64.63 Aligned_cols=61 Identities=25% Similarity=0.266 Sum_probs=45.3
Q ss_pred cccccccccccccccccchHHHHHHHHH--HcCCCCCCCEEEEEEeChhHhhhheeeEEeccC
Q 009935 431 HMEPSRMTLYRFGNTSSSSLWYELAYSE--AKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTI 491 (522)
Q Consensus 431 ~~~~S~~tl~r~GNtsSasi~~~La~~~--~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~ 491 (522)
+++||...-.+.||+.++|++..|+-++ ..+..-.|+||.+.++|||......-++..+..
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~ 205 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGA 205 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCc
Confidence 6667777778999999999999999888 344445799999999999987666666665543
No 133
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.78 E-value=0.033 Score=46.43 Aligned_cols=76 Identities=17% Similarity=0.255 Sum_probs=47.8
Q ss_pred HHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEE---ecCCCchHHHHHHHHHHHHHHcCCCCeEEEEE
Q 009935 194 LSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYN---LGGMGCSAGLISIDLAKQLLQVHPNSYALVVS 270 (522)
Q Consensus 194 L~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs 270 (522)
|+++|++++|||.+|.... .......+.+++|++++....+ ..+++|++-..+|..+.+-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999997642 2345566899999985543333 34567777777776655532334678899887
Q ss_pred ecc
Q 009935 271 MEN 273 (522)
Q Consensus 271 ~E~ 273 (522)
.-.
T Consensus 77 ~G~ 79 (90)
T PF08541_consen 77 FGA 79 (90)
T ss_dssp EET
T ss_pred EEh
Confidence 643
No 134
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=94.66 E-value=0.063 Score=53.41 Aligned_cols=91 Identities=16% Similarity=0.102 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEee----cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHH
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNC----SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLL 258 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~----s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL 258 (522)
.++..-|++.+|+.+++.++.+|.+|+.. |.+-. -++..|--+-|.+.+.+++.++ -=|.+++.++-.+.+-+
T Consensus 29 TdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI--Yl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~I 105 (396)
T KOG1391|consen 29 TDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI--YLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQEI 105 (396)
T ss_pred hhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce--EeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHHh
Confidence 44559999999999999999999999763 33311 1223344444556678899999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 009935 259 QVHPNSYALVVSMENITL 276 (522)
Q Consensus 259 ~~~~~~~aLVVs~E~~s~ 276 (522)
..+..+-+|-=++|++|+
T Consensus 106 ~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 106 CVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hcCcceEEEecCcccccc
Confidence 999888888889999986
No 135
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.66 E-value=0.23 Score=51.78 Aligned_cols=120 Identities=15% Similarity=0.183 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC---CcC-----EEEEeecC---------------------CCCCc----c-HHHHHHH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAK---DIG-----ILVVNCSL---------------------FCPTP----S-LSAMIVN 226 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~---dID-----~LI~~~s~---------------------~~~~P----s-~a~~I~~ 226 (522)
....++..|+++||+++++-+. +.| .+|-.+-. .+..| . -+.+|.-
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 3567899999999999998765 222 23311100 01233 1 2688999
Q ss_pred HcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccccc-----cc-------c---cC--------CC
Q 009935 227 HYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITL-----NW-------Y---FG--------ND 283 (522)
Q Consensus 227 ~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~-----~~-------~---~~--------~d 283 (522)
+||++ .+.+.++ .+|+.+..+|--|.++|+.|..+..|-=++|.+-. .| . ++ .+
T Consensus 173 ~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~ 249 (440)
T KOG1394|consen 173 KYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKK 249 (440)
T ss_pred hhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccC
Confidence 99997 6788899 59999999999999999999877777667776321 00 0 00 12
Q ss_pred ccccccccccccceEEEEEecCCC
Q 009935 284 RSMLVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 284 r~~l~~~~lfgDGAAAvLLs~~~~ 307 (522)
|+ ...+|.|++.++|+.=..
T Consensus 250 Rd----GFVmGEGagvlvlEelEH 269 (440)
T KOG1394|consen 250 RD----GFVMGEGAGVLVLEELEH 269 (440)
T ss_pred CC----ceeeccceeEEehHhHHH
Confidence 33 468899999999976443
No 136
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=94.15 E-value=0.16 Score=54.65 Aligned_cols=91 Identities=19% Similarity=0.282 Sum_probs=64.4
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCC--------CchHHHHHHHHHHHHH
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGM--------GCSAGLISIDLAKQLL 258 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsggl~AL~lA~~lL 258 (522)
..|++++|+++|++++|||.+.++-. .........++||+.. ..+|++|- |++|....+.+..+|.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 57999999999999999999986621 1233457778899863 35677763 6788778888888887
Q ss_pred HcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEec
Q 009935 259 QVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSN 304 (522)
Q Consensus 259 ~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~ 304 (522)
+.+ .++.|+ ..|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl~--------------------~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLV--------------------TMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEE--------------------EEEeeccceeEEEEEe
Confidence 654 344422 2366677777888765
No 137
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=93.94 E-value=0.2 Score=52.54 Aligned_cols=83 Identities=14% Similarity=0.171 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE--E---EecCCCchHHHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS--Y---NLGGMGCSAGLISIDLAKQ 256 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~--~---dl~g~gCsggl~AL~lA~~ 256 (522)
....+..+++++|+++|++++|||.+++... .+.+-..+.++||++++-.. + ++.++++++...+|..+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 3444568999999999999999999987642 22355668999999744222 2 6778888888888876654
Q ss_pred HHHcCCCCeEEEEE
Q 009935 257 LLQVHPNSYALVVS 270 (522)
Q Consensus 257 lL~~~~~~~aLVVs 270 (522)
. ..+++++|+++
T Consensus 282 ~--~~~Gd~vll~~ 293 (345)
T TIGR00748 282 I--AEPGDRILAVS 293 (345)
T ss_pred h--cCCCCEEEEEE
Confidence 2 22344544443
No 138
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.68 E-value=0.29 Score=52.03 Aligned_cols=89 Identities=17% Similarity=0.185 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHc-----CCCCCee---EEEecCCCchHHHHHHH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHY-----KLRGNIT---SYNLGGMGCSAGLISID 252 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~L-----Gl~~~~~---~~dl~g~gCsggl~AL~ 252 (522)
.+...+.++++++|+++|++++|||.++.+.. .+..-..+.++| |++++-. .-++.+++|++...+|.
T Consensus 269 ~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~ 344 (378)
T PRK06816 269 NIVVYTIKPLLELVDKRNLDPDDIDYFLPHYS----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLD 344 (378)
T ss_pred HhHHHHHHHHHHHHHHcCCChhhCCEEeeCcc----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHH
Confidence 34456688999999999999999999986542 234456777776 7864321 22566778888888887
Q ss_pred HHHHHHHcCCCCeEEEEEecc
Q 009935 253 LAKQLLQVHPNSYALVVSMEN 273 (522)
Q Consensus 253 lA~~lL~~~~~~~aLVVs~E~ 273 (522)
.|..-=+-.+++++++++.|.
T Consensus 345 ~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 345 ELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHHHcCCCCCCCEEEEEEecc
Confidence 663311123578888888775
No 139
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.27 E-value=0.28 Score=50.94 Aligned_cols=88 Identities=13% Similarity=0.206 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEE---ecCCCchHHHHHHHHHH
Q 009935 179 RNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYN---LGGMGCSAGLISIDLAK 255 (522)
Q Consensus 179 ~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsggl~AL~lA~ 255 (522)
.++....+.++.+++|+++|++++|||.+++... .+..-..+.++||++++-...+ ..++++++...+|+.+
T Consensus 234 ~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~----~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~- 308 (338)
T PRK09258 234 LKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQV----GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA- 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCC----CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH-
Confidence 3455566778899999999999999999886642 2345568999999975333222 5555666666666544
Q ss_pred HHHHcC---CCCeEEEEEecc
Q 009935 256 QLLQVH---PNSYALVVSMEN 273 (522)
Q Consensus 256 ~lL~~~---~~~~aLVVs~E~ 273 (522)
++.+ +++++|+++...
T Consensus 309 --~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 --AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred --HHhCCCCCCCEEEEEEech
Confidence 3332 467888877543
No 140
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.24 E-value=0.23 Score=51.33 Aligned_cols=89 Identities=15% Similarity=0.172 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE---EEecCCCchHHHHHHHHHH
Q 009935 179 RNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS---YNLGGMGCSAGLISIDLAK 255 (522)
Q Consensus 179 ~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsggl~AL~lA~ 255 (522)
.+++.....++++++|+++|++++|||.+++... .+.+-..+.++||++++-.. -+..++++++...+|+.+.
T Consensus 222 ~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~ 297 (326)
T PRK05963 222 FTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQA----NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLAN 297 (326)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHH
Confidence 3456667788999999999999999999887432 24566778999999754332 2334455556666665442
Q ss_pred HHHHcCCCCeEEEEEe
Q 009935 256 QLLQVHPNSYALVVSM 271 (522)
Q Consensus 256 ~lL~~~~~~~aLVVs~ 271 (522)
.-=+..+++++|+++.
T Consensus 298 ~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 298 LEQPLREGERLLFAAA 313 (326)
T ss_pred HhCCCCCCCEEEEEEE
Confidence 2101124678887775
No 141
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=92.60 E-value=0.48 Score=48.65 Aligned_cols=77 Identities=18% Similarity=0.178 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCC---CeeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 185 VMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRG---NITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 185 l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~---~~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
...++++++|+++|++++|||.++... +......-........++.++ ....-++.++++++++..|..+...++.
T Consensus 206 ~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~ 285 (332)
T cd00825 206 GLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEH 285 (332)
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhc
Confidence 346899999999999999999999774 333333333344444454320 1122366777888888888888777765
Q ss_pred C
Q 009935 261 H 261 (522)
Q Consensus 261 ~ 261 (522)
+
T Consensus 286 ~ 286 (332)
T cd00825 286 G 286 (332)
T ss_pred C
Confidence 5
No 142
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.43 E-value=0.45 Score=48.95 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE---EEecCCCchHHHHHHHHHHHH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS---YNLGGMGCSAGLISIDLAKQL 257 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsggl~AL~lA~~l 257 (522)
++.....++++++|+++|++++|||.+++.. +.+.....+.++||++++-.. -+..+++|++...+|..+
T Consensus 222 ~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~--- 294 (325)
T PRK12879 222 WAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLA--- 294 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHH---
Confidence 3445567889999999999999999998763 234556789999999743222 234455566666666433
Q ss_pred HHcC---CCCeEEEEEe
Q 009935 258 LQVH---PNSYALVVSM 271 (522)
Q Consensus 258 L~~~---~~~~aLVVs~ 271 (522)
++.+ +++++|+++.
T Consensus 295 ~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4543 4567777664
No 143
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.09 E-value=0.51 Score=48.77 Aligned_cols=83 Identities=14% Similarity=0.153 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEE---EecCCCchHHHHHHHHHHHH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSY---NLGGMGCSAGLISIDLAKQL 257 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsggl~AL~lA~~l 257 (522)
.+....-++++++|+++|++++|||.+++.... ......++++||++++.... +..+++|++...+|+. +
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~----~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~---~ 299 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQAS----GPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE---A 299 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---H
Confidence 345567789999999999999999999876431 12356889999998544332 3344444555555543 3
Q ss_pred HHcC---CCCeEEEEE
Q 009935 258 LQVH---PNSYALVVS 270 (522)
Q Consensus 258 L~~~---~~~~aLVVs 270 (522)
++.+ +++++|+++
T Consensus 300 ~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 300 IKQKKVQRGNKILLLG 315 (329)
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4443 456777665
No 144
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=92.06 E-value=0.4 Score=49.25 Aligned_cols=84 Identities=17% Similarity=0.236 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE--E-EecCCCchHHHHHHHHHHHH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS--Y-NLGGMGCSAGLISIDLAKQL 257 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~--~-dl~g~gCsggl~AL~lA~~l 257 (522)
+....+.++++++|+++|++++|||.++++.. .+..-..++++||++++-.. + .+.+++|++-+.+|..+.
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~-- 289 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELL-- 289 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHH--
Confidence 44555678899999999999999999986532 34566789999999843222 2 234455666666665443
Q ss_pred HHcC---CCCeEEEEEe
Q 009935 258 LQVH---PNSYALVVSM 271 (522)
Q Consensus 258 L~~~---~~~~aLVVs~ 271 (522)
+.+ +++++|+++.
T Consensus 290 -~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 290 -RTGRIKPGDLLLLVAF 305 (318)
T ss_pred -HcCCCCCCCEEEEEEE
Confidence 333 4567777664
No 145
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.99 E-value=0.38 Score=49.36 Aligned_cols=85 Identities=14% Similarity=0.140 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEE---EecCCCchHHHHHHHHHHH
Q 009935 180 NEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSY---NLGGMGCSAGLISIDLAKQ 256 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsggl~AL~lA~~ 256 (522)
+.....+.++.+++|+++|++++|||.++... ..+..-.++.++||++++-... +..+++|+..+..|+ +
T Consensus 215 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~ 287 (319)
T PRK09352 215 KFAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---E 287 (319)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---H
Confidence 34455577899999999999999999998753 2345567899999997543222 244445555555554 3
Q ss_pred HHHcC---CCCeEEEEEe
Q 009935 257 LLQVH---PNSYALVVSM 271 (522)
Q Consensus 257 lL~~~---~~~~aLVVs~ 271 (522)
+++.+ +++++|+++.
T Consensus 288 ~~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 288 AVRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 34443 4567777764
No 146
>PRK04262 hypothetical protein; Provisional
Probab=91.76 E-value=0.39 Score=50.32 Aligned_cols=68 Identities=15% Similarity=0.233 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE--E---EecCCCchHHHHHHHHHH
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS--Y---NLGGMGCSAGLISIDLAK 255 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~--~---dl~g~gCsggl~AL~lA~ 255 (522)
..+.++++++|+++|++++|||.+++.. +.+.+-..++++||++++-.. + +..++++++-..+|..+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 3567789999999999999999988763 223455678999999744322 2 566666677777776554
No 147
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=91.43 E-value=0.18 Score=51.01 Aligned_cols=93 Identities=11% Similarity=0.130 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
.+++-+|...+|+++.++.+.||.+|+.+. ...-+...+..-+-.-|.+..+++..+. |+|-+.-.|+-....||.++
T Consensus 67 hdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliatg 145 (465)
T KOG1392|consen 67 HDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIATG 145 (465)
T ss_pred hHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEeeC
Confidence 455599999999999999999999999874 3555566666666666888788999999 89999999999999999998
Q ss_pred CCCeEEEEEeccccc
Q 009935 262 PNSYALVVSMENITL 276 (522)
Q Consensus 262 ~~~~aLVVs~E~~s~ 276 (522)
..+.++.=+.|.+|.
T Consensus 146 ~~dvivaggvelmsd 160 (465)
T KOG1392|consen 146 NADVIVAGGVELMSD 160 (465)
T ss_pred CcCEEEEcceeeccc
Confidence 766555556788875
No 148
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=91.41 E-value=0.45 Score=50.54 Aligned_cols=87 Identities=15% Similarity=0.163 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE---EEecCCCchHHHHHHHHHHHH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS---YNLGGMGCSAGLISIDLAKQL 257 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsggl~AL~lA~~l 257 (522)
.+...+-++++++|+++|++++|||.++.... .+.+-..++++||++++-.. -+..++++++...+|+.+..-
T Consensus 277 ~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~~ 352 (379)
T PLN02326 277 FAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRS 352 (379)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHHc
Confidence 34455667899999999999999999886643 23344668999999854322 245566666767777655321
Q ss_pred HHcCCCCeEEEEEe
Q 009935 258 LQVHPNSYALVVSM 271 (522)
Q Consensus 258 L~~~~~~~aLVVs~ 271 (522)
=+..+++++|+++.
T Consensus 353 g~~~~Gd~vll~~~ 366 (379)
T PLN02326 353 GKVKKGDVIATAGF 366 (379)
T ss_pred CCCCCCCEEEEEEE
Confidence 01124567776653
No 149
>PRK06840 hypothetical protein; Validated
Probab=91.17 E-value=0.7 Score=48.03 Aligned_cols=81 Identities=23% Similarity=0.286 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCee--EEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNIT--SYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~--~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
....++++++|+++|++++|||.++.... .+..-..++++||++++-. .-+..+++|++.+.+|..+ ++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILHM----KRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCc----CHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHcC
Confidence 34578999999999999999999875421 2444567899999974321 1144555666666666543 4443
Q ss_pred ---CCCeEEEEEe
Q 009935 262 ---PNSYALVVSM 271 (522)
Q Consensus 262 ---~~~~aLVVs~ 271 (522)
+++++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 4566776664
No 150
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=90.79 E-value=1.1 Score=44.06 Aligned_cols=76 Identities=18% Similarity=0.103 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCC---CCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLR---GNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~---~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
..++++++|+++|++++|||.++.. +.................+.+ .....-.+.+++|++++..|..+..-++..
T Consensus 147 ~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~ 226 (254)
T cd00327 147 LARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHE 226 (254)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCC
Confidence 4788999999999999999998866 333333333233333333332 111223555566777777776665555544
No 151
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=90.43 E-value=5.6 Score=39.17 Aligned_cols=114 Identities=17% Similarity=0.007 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCC----------------CCc-cHHHHHHH--------HcCCCCCeeE
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFC----------------PTP-SLSAMIVN--------HYKLRGNITS 236 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~----------------~~P-s~a~~I~~--------~LGl~~~~~~ 236 (522)
...|++.++.+++++. .++|.+|++|..+. ..| .++.-|+| ..|. ....
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 4567788888888653 57888998875321 344 22233333 2333 3567
Q ss_pred EEecCCCchHHHHHHHHHHHHHHcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEecCCC
Q 009935 237 YNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 237 ~dl~g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~ 307 (522)
.-|.. |=.++-.||.-|..+|+.+ .+.||||..|-.....|.....+ .....-.|.|++|+++..
T Consensus 108 tal~a-~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 108 TALAA-GEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEEec-CcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 77774 7788999999999999999 89999999998766444432111 112344677788876554
No 152
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=90.36 E-value=0.84 Score=47.26 Aligned_cols=82 Identities=11% Similarity=0.184 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEE---EecCCCchHHHHHHHHHHHHHH
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSY---NLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsggl~AL~lA~~lL~ 259 (522)
....-.+++++|+++|++++|||.+++.... +.....+.++||++++-... +..+++|++...+|+.+ ++
T Consensus 225 ~~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~ 297 (326)
T CHL00203 225 VFQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQ 297 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HH
Confidence 3456778899999999999999999876432 34556789999997443322 34455666666666554 34
Q ss_pred cC---CCCeEEEEEe
Q 009935 260 VH---PNSYALVVSM 271 (522)
Q Consensus 260 ~~---~~~~aLVVs~ 271 (522)
.+ +++++|+++.
T Consensus 298 ~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 298 NNKIQPGQIIVLSGF 312 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 33 4567777763
No 153
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.07 E-value=0.94 Score=47.88 Aligned_cols=86 Identities=12% Similarity=0.136 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHH-cCCCC-Cee----EEEecCCCchHHHHHHHH
Q 009935 180 NEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNH-YKLRG-NIT----SYNLGGMGCSAGLISIDL 253 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~-LGl~~-~~~----~~dl~g~gCsggl~AL~l 253 (522)
+++...+.++++++|+++|++++|||.++..... +.+-..+.++ ||+.. .-+ --...+++|++...+|+.
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 4567778899999999999999999999876321 1222334566 56531 111 225667788888888887
Q ss_pred HHHHHHcCCCCeEEEEEe
Q 009935 254 AKQLLQVHPNSYALVVSM 271 (522)
Q Consensus 254 A~~lL~~~~~~~aLVVs~ 271 (522)
+.+-+ .+++++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 75432 35677777764
No 154
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=89.99 E-value=1.3 Score=47.64 Aligned_cols=69 Identities=17% Similarity=0.238 Sum_probs=45.4
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCC--------CchHHHHHHHHHHHHH
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGM--------GCSAGLISIDLAKQLL 258 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsggl~AL~lA~~lL 258 (522)
..|++++|+++|++|+|||++-++- ..+...-...+.||+.++-..+|.+|- |++|....++++++|-
T Consensus 300 ~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr 375 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLE 375 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHH
Confidence 6899999999999999999986431 123334456678998544456777762 3334445555666554
Q ss_pred H
Q 009935 259 Q 259 (522)
Q Consensus 259 ~ 259 (522)
.
T Consensus 376 ~ 376 (401)
T PRK09050 376 R 376 (401)
T ss_pred h
Confidence 3
No 155
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=89.75 E-value=0.93 Score=46.35 Aligned_cols=85 Identities=19% Similarity=0.255 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEE---ecCCCchHHHHHHHHHHH
Q 009935 180 NEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYN---LGGMGCSAGLISIDLAKQ 256 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsggl~AL~lA~~ 256 (522)
+.......++++++|+++|++++|||.+++... .+..-..+.++||++++-...+ ..++++++.+.+|+.+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 292 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA-- 292 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 445567788999999999999999999887632 3445567899999974433222 3445555555555544
Q ss_pred HHHcC---CCCeEEEEEe
Q 009935 257 LLQVH---PNSYALVVSM 271 (522)
Q Consensus 257 lL~~~---~~~~aLVVs~ 271 (522)
++.+ +++++|+++.
T Consensus 293 -~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 -IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3443 5688888775
No 156
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=88.77 E-value=1.9 Score=46.38 Aligned_cols=56 Identities=9% Similarity=-0.006 Sum_probs=38.4
Q ss_pred cccccccEEEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHH
Q 009935 400 DFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAY 456 (522)
Q Consensus 400 ~~~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~ 456 (522)
...+|||.|-+|-.-....-.+.+.||++++++.++ -..--+||...++=...+.+
T Consensus 315 l~~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~-GG~la~GHP~GAsG~~~~~~ 370 (402)
T PRK08242 315 LTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNVN-GGAIAMGHPLGATGAMILGT 370 (402)
T ss_pred CCHHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcC-CCHHhcCCcHHHHHHHHHHH
Confidence 346899999999887777777889999998877531 22334677766554444333
No 157
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=88.33 E-value=1.7 Score=46.70 Aligned_cols=85 Identities=11% Similarity=0.022 Sum_probs=46.9
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcCCC--cccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EEeChh
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLELS--EWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQ-IAFGSG 477 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lgl~--~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~Vll-iafGsG 477 (522)
..+|||++-+|-.-....-...+.||+. ...+.++-- +--+||...++=...+.++..+=+-+.|.+.+. +..|.|
T Consensus 312 ~~~DID~iei~dafa~~~l~~~e~lg~~~~~~pvN~~GG-~la~GHp~gasG~~~v~e~~~qL~~~~~~~g~~~~c~~gG 390 (400)
T PRK13359 312 TLDQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGG-AIALGHPLGASGARLVTTALYQLERTGGRFALCTMCIGVG 390 (400)
T ss_pred CHHHcCcCccCcHhHHHHHHHHHHcCCCCCCCCEECCCc-hhhcCCchhHHHHHHHHHHHHHHhhcCCCeEEEEEcccCC
Confidence 3589999998887766666677889984 345532111 113788876665555444443222133444332 333333
Q ss_pred HhhhheeeEE
Q 009935 478 FKCNSAVWQA 487 (522)
Q Consensus 478 ~~~~s~v~r~ 487 (522)
.-.+++++.
T Consensus 391 -~g~a~~ie~ 399 (400)
T PRK13359 391 -QGIAIAIER 399 (400)
T ss_pred -ceeEEEEEe
Confidence 334566653
No 158
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=88.27 E-value=2.4 Score=46.91 Aligned_cols=84 Identities=15% Similarity=0.058 Sum_probs=55.4
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcCCCcc---cccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChh
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLELSEW---HMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSG 477 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lgl~~e---~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG 477 (522)
..+|||.+=+|-.-.-......+.||+.++ .+.. .--+-.+||.+.++-...+.++..+=|=+++.+.+..+.|.-
T Consensus 308 ~~~Did~~elydcF~~~~~~~~E~LGl~~~g~~pvN~-sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~~GG~ 386 (498)
T PRK08257 308 GIDDIDAFDLYSCFPSAVQVAARELGLDLDDPRPLTV-TGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTANGGY 386 (498)
T ss_pred CHHHCCEEEeccCCHHHHHHHHHHcCcCCCCCCCcCC-CcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEECCCCh
Confidence 358999999999988888888899999876 2321 112445899988876666666555322235677777776643
Q ss_pred Hhhh-heee
Q 009935 478 FKCN-SAVW 485 (522)
Q Consensus 478 ~~~~-s~v~ 485 (522)
++.. ..||
T Consensus 387 ~~~~~~~vl 395 (498)
T PRK08257 387 LTKHSVGVY 395 (498)
T ss_pred hhceEEEEE
Confidence 3333 3344
No 159
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=88.20 E-value=1.8 Score=46.51 Aligned_cols=81 Identities=14% Similarity=0.107 Sum_probs=45.7
Q ss_pred cccccEEEEcCCChHHHHHHHHHcCCCc--ccccccccccccccccccch---HHHHHHHHHHcCCCCCCCEEE-EEEeC
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLELSE--WHMEPSRMTLYRFGNTSSSS---LWYELAYSEAKGRMRKGDRTW-QIAFG 475 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lgl~~--e~~~~S~~tl~r~GNtsSas---i~~~La~~~~~g~l~~Gd~Vl-liafG 475 (522)
++|||++-+|-.-....-...+.||+.+ +.+.++-- +--+||...++ ...++.+-++ + +.|.+.+ .+..|
T Consensus 313 ~~DID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~GG-~la~GHp~gasG~~~~~e~~~qLr-~--~~~~~g~~~~c~~ 388 (400)
T TIGR02430 313 IDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGG-AIALGHPLGASGARLVLTALRQLE-R--SGGRYALCTMCIG 388 (400)
T ss_pred HHHCCCcccCcHHHHHHHHHHHHcCCCCCCCeECCCCc-hHhccChHHHHHHHHHHHHHHHHH-h--cCCCEEEEEEccc
Confidence 5899999988877666667788999854 44532111 22378887774 4444444332 2 3344433 23344
Q ss_pred hhHhhhheeeEE
Q 009935 476 SGFKCNSAVWQA 487 (522)
Q Consensus 476 sG~~~~s~v~r~ 487 (522)
.|.- .+++++.
T Consensus 389 gG~g-~a~~~e~ 399 (400)
T TIGR02430 389 VGQG-IALAIER 399 (400)
T ss_pred cChh-hEEEEEe
Confidence 4433 4455553
No 160
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=87.32 E-value=1.9 Score=46.45 Aligned_cols=86 Identities=9% Similarity=-0.092 Sum_probs=50.6
Q ss_pred cccccEEEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhh
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCN 481 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~ 481 (522)
.+|||.+=+|-.-....=...+.||+.++.+.+ --..--+||...++-...+.++..+=+-++|.+.+...-+.|-.-.
T Consensus 320 ~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~-~GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~gg~g~ 398 (406)
T PRK07851 320 IDDIDLVEINEAFAAQVLPSARELGIDEDKLNV-SGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQGM 398 (406)
T ss_pred HHHCCeehhhhHHHHHHHHHHHHhCCCccccCC-CCChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChhh
Confidence 578998877665544433445889997766643 1234458999888777776665553222344444443333444445
Q ss_pred heeeEEe
Q 009935 482 SAVWQAL 488 (522)
Q Consensus 482 s~v~r~~ 488 (522)
+++++.+
T Consensus 399 a~~~e~~ 405 (406)
T PRK07851 399 AMVLERL 405 (406)
T ss_pred EEEEEec
Confidence 6666643
No 161
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=87.12 E-value=1.3 Score=46.54 Aligned_cols=87 Identities=14% Similarity=0.182 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCC-Cee----EEEecCCCchHHHHHHHHHHHHHH
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRG-NIT----SYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~-~~~----~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
..++.+++|+++|++|+|||.|+.. ++..+-....+..+..-+|-.. ..+ .-.+...+.++|...+-.+-..++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999865 4332222233444455555311 111 112333334444444444545555
Q ss_pred cC--CCCeEEEEEec
Q 009935 260 VH--PNSYALVVSME 272 (522)
Q Consensus 260 ~~--~~~~aLVVs~E 272 (522)
.+ +..++||.++.
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 55 46789988754
No 162
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=87.01 E-value=1.6 Score=46.60 Aligned_cols=49 Identities=16% Similarity=0.218 Sum_probs=35.2
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG 241 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 241 (522)
..|++++|+++|++|+|||.+-++- ..+...-...+.||+.. ..+|++|
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~--~~vn~~G 342 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA--AKVNVNG 342 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC--ccCCcCC
Confidence 6899999999999999999987642 13344456677888752 2455554
No 163
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=86.95 E-value=1.8 Score=46.40 Aligned_cols=55 Identities=5% Similarity=-0.134 Sum_probs=35.1
Q ss_pred cccccEEEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHH
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYS 457 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~ 457 (522)
.+|||.+-+|-.-....=...+.||+.++++.++ -..-.+||...++=...+.++
T Consensus 307 ~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~-GG~~a~GHp~gatG~r~~~~l 361 (392)
T PRK07108 307 VDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVN-GGAIAVGHPYGVSGARLTGHA 361 (392)
T ss_pred HHHcCchHhhhHHHHHHHHHHHhcCCCccccCCC-CChHHhCcchhhhHHHHHHHH
Confidence 5889999888665444444568899988777532 233457887776644444333
No 164
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=86.66 E-value=2.3 Score=45.50 Aligned_cols=67 Identities=25% Similarity=0.337 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC--------CCchHHHHHHHHHHHH
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG--------MGCSAGLISIDLAKQL 257 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~AL~lA~~l 257 (522)
...|++++|+++|++|+|||.+=++- ..+...-+..+.||+.+. .+|.+| .||+|...-++++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~~--~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDPE--TVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCcc--ccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 47899999999999999999986542 223445566778887632 456554 2566666777777777
Q ss_pred H
Q 009935 258 L 258 (522)
Q Consensus 258 L 258 (522)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 4
No 165
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=86.61 E-value=2.5 Score=45.21 Aligned_cols=83 Identities=13% Similarity=0.027 Sum_probs=51.3
Q ss_pred cccccEEEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EEeChhHhh
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQ-IAFGSGFKC 480 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~Vll-iafGsG~~~ 480 (522)
.+|||.+=+|-.-....-...+.||+.++.+.++ -..--+||...++=...+.++..+=+-+.|++.+. +..|.| .-
T Consensus 308 ~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG-~g 385 (393)
T PRK08235 308 VEDIDLFEINEAFAAVALASTEIAGIDPEKVNVN-GGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGG-QG 385 (393)
T ss_pred HHHCCeehhcchhHHHHHHHHHHhCCCcccCCcC-CchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-ce
Confidence 5889999888776666666788999988777532 22334788877776555555444322245566444 334444 34
Q ss_pred hheeeE
Q 009935 481 NSAVWQ 486 (522)
Q Consensus 481 ~s~v~r 486 (522)
.+++|+
T Consensus 386 ~a~~~e 391 (393)
T PRK08235 386 DAVLIE 391 (393)
T ss_pred EEEEEE
Confidence 556665
No 166
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=86.21 E-value=4.2 Score=43.47 Aligned_cols=84 Identities=7% Similarity=-0.063 Sum_probs=50.2
Q ss_pred cccccEEEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EEeChhHhh
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQ-IAFGSGFKC 480 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~Vll-iafGsG~~~ 480 (522)
.+|||.+=+|-.-....-...+.||++.+.+.++ --+-.+||...++-...+.++..+=+-+.|.+.+. +..|.| .-
T Consensus 302 ~~did~~ei~d~F~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~~~~c~~gg-~g 379 (387)
T PRK07850 302 IGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVN-GGAIALGHPVGSTGARLITTALHELERTDKSTALITMCAGGA-LS 379 (387)
T ss_pred HHHcCeeeecccchHHHHHHHHHcCCCCCCcCCC-CchhhcCCCcchhHHHHHHHHHHHHHhcCCCeEEEEEccccC-ce
Confidence 5899999999987766666678999987776532 12345899887766555554444322123333333 233333 33
Q ss_pred hheeeEE
Q 009935 481 NSAVWQA 487 (522)
Q Consensus 481 ~s~v~r~ 487 (522)
.++++++
T Consensus 380 ~a~~~e~ 386 (387)
T PRK07850 380 TGTIIER 386 (387)
T ss_pred eEEEEEe
Confidence 4566654
No 167
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=86.10 E-value=2.7 Score=45.06 Aligned_cols=92 Identities=21% Similarity=0.304 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC--------CCchHHHHHHHHHHHH
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG--------MGCSAGLISIDLAKQL 257 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~AL~lA~~l 257 (522)
...|++++|+++|++|+|||++-++- ......-...+.||+.+ ..+|.+| .|++|....+.++.+|
T Consensus 299 ~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~L 372 (399)
T PRK09052 299 PIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHGL 372 (399)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHHH
Confidence 47899999999999999999986331 12233445567788752 2345544 1444555555555555
Q ss_pred HHcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEec
Q 009935 258 LQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSN 304 (522)
Q Consensus 258 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~ 304 (522)
-..+ .++.| .+.|.-|-.++|+||++
T Consensus 373 ~~~~-~~~g~--------------------~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 373 RRTN-LKYGM--------------------VTMCVGTGMGAAGIFER 398 (399)
T ss_pred HhcC-CCeEE--------------------EEEcccCCceeEEEEEe
Confidence 4322 22322 23366677777777764
No 168
>PLN02287 3-ketoacyl-CoA thiolase
Probab=85.96 E-value=2.3 Score=46.47 Aligned_cols=96 Identities=20% Similarity=0.258 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC--------CCchHHHHHHHHHHHH
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG--------MGCSAGLISIDLAKQL 257 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~AL~lA~~l 257 (522)
...|++++|+++|++|+|||++=++ .......-+-.+.||+.+ ..+|++| .||+|....+.++.+|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 3689999999999999999998544 111122233456778752 3455554 2556666666666666
Q ss_pred HHcCCC-CeEEEEEecccccccccCCCccccccccccccceEEEEEecCCC
Q 009935 258 LQVHPN-SYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 258 L~~~~~-~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~~~~ 307 (522)
-+.+.. ++.| .+.|.-|-.++|+||++.+.
T Consensus 407 ~~~~~~~~~gl--------------------~~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFGV--------------------VSMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCeeE--------------------EEEccccCceeEEEEEecCc
Confidence 543210 2332 33477777888899988764
No 169
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=85.34 E-value=4.4 Score=43.53 Aligned_cols=86 Identities=12% Similarity=0.039 Sum_probs=48.6
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcCCCcc---cccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EEeCh
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLELSEW---HMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQ-IAFGS 476 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lgl~~e---~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~Vll-iafGs 476 (522)
..+|||.+-+|-.-....-...+.||+.++ ++.+ .-..--+||...++=...+.++..+=+-+.|.+.+. +..|.
T Consensus 314 ~~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~-~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~g 392 (404)
T PRK06205 314 TLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNV-NGSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGG 392 (404)
T ss_pred CHHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCC-CCCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 358999999998877666667788998763 4432 112334788876655444444333211123344333 33333
Q ss_pred hHhhhheeeEEe
Q 009935 477 GFKCNSAVWQAL 488 (522)
Q Consensus 477 G~~~~s~v~r~~ 488 (522)
| .-.+++++.+
T Consensus 393 g-~g~a~~~e~~ 403 (404)
T PRK06205 393 G-QGLAAVFERV 403 (404)
T ss_pred C-hhhEEEEEec
Confidence 3 3456666654
No 170
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=84.91 E-value=1.5 Score=45.81 Aligned_cols=55 Identities=24% Similarity=0.247 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCee
Q 009935 177 EARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNIT 235 (522)
Q Consensus 177 ~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~ 235 (522)
+--+++...+.++++++|+++|++++|||.+|... .-..+-..++++||++++-.
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~ 270 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKV 270 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHH
Confidence 44577899999999999999999999999998553 23445678999999975433
No 171
>PRK09051 beta-ketothiolase; Provisional
Probab=84.77 E-value=2.2 Score=45.64 Aligned_cols=49 Identities=16% Similarity=0.274 Sum_probs=36.9
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG 241 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 241 (522)
..|++++|+++|++|+|||++=++- ..+...-...+.||+. ...+|.+|
T Consensus 295 ~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~--~~~vN~~G 343 (394)
T PRK09051 295 VPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLD--PAKVNPNG 343 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCC--ccccCCCc
Confidence 7899999999999999999986541 1334456667889985 34667776
No 172
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=84.41 E-value=2.2 Score=44.79 Aligned_cols=88 Identities=14% Similarity=0.111 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCe------eEEEecCCCchHHHHHH
Q 009935 180 NEAEMVMFGAIDELLSKT--GVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNI------TSYNLGGMGCSAGLISI 251 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~a--gi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~------~~~dl~g~gCsggl~AL 251 (522)
+.+...+.++++++|+++ |++++|||.+++.... ...-..+.++||++++- ..-+.+++++++...+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~----~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGG----RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCCC----hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 445566778899999999 9999999999876532 23446789999997432 12366777777888788
Q ss_pred HHHHHHHHcCCCCeEEEEEe
Q 009935 252 DLAKQLLQVHPNSYALVVSM 271 (522)
Q Consensus 252 ~lA~~lL~~~~~~~aLVVs~ 271 (522)
+.+.+-=+..+++++|+++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 76643211124567777664
No 173
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=84.39 E-value=3.7 Score=43.51 Aligned_cols=82 Identities=17% Similarity=0.229 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCC-----CCeeEE-EecCCCchHHHHHHHHHHH
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLR-----GNITSY-NLGGMGCSAGLISIDLAKQ 256 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~-----~~~~~~-dl~g~gCsggl~AL~lA~~ 256 (522)
..-...|+++++++.|.+|+|.|.+++.. |.|-+....+..+|.+ +..... .++++.|.+...+| |.-
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as~ 281 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--ASL 281 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HHH
Confidence 45668999999999999999999998764 3445556666666655 334433 58888998888665 333
Q ss_pred HHHcC-CCCeEEEEE
Q 009935 257 LLQVH-PNSYALVVS 270 (522)
Q Consensus 257 lL~~~-~~~~aLVVs 270 (522)
|=++. +++++|+++
T Consensus 282 L~~a~~~G~rIl~~S 296 (377)
T COG3425 282 LDNAKLPGDRILLFS 296 (377)
T ss_pred HhhcCCCCCEEEEEe
Confidence 33333 455665543
No 174
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=84.37 E-value=5.3 Score=43.26 Aligned_cols=86 Identities=10% Similarity=-0.039 Sum_probs=48.2
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcC-----------------CCcccccccccccccccccccchHHHHHHHHHHcCCC
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLE-----------------LSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRM 463 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lg-----------------l~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l 463 (522)
..+|||.+-+|-.-....=...+.|+ ++.+.+.++= -+--+||...++-...+.++..+=+-
T Consensus 325 ~~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~G-G~la~GhP~gasG~~~~~e~~~qLrg 403 (428)
T PRK08963 325 TLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLG-GSIAYGHPFAATGARMITQTLHELRR 403 (428)
T ss_pred CHHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCC-CHHhcCCCccccHHHHHHHHHHHHhh
Confidence 35899999999886554333444442 3333443211 12347887766655555554443222
Q ss_pred CCCCEEEEEEeChhHhhhheeeEE
Q 009935 464 RKGDRTWQIAFGSGFKCNSAVWQA 487 (522)
Q Consensus 464 ~~Gd~VlliafGsG~~~~s~v~r~ 487 (522)
+.|++.+...-+.|-...+++|+.
T Consensus 404 ~~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 404 RGGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred cCCCEEEEEEccccChhhEEEEEe
Confidence 466776665555555556677764
No 175
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=84.15 E-value=4.9 Score=42.56 Aligned_cols=69 Identities=20% Similarity=0.252 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC--------CCchHHHHHHHHHHHH
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG--------MGCSAGLISIDLAKQL 257 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~AL~lA~~l 257 (522)
...|++++|+++|++|+|||.+..+- ..........+.||+.+ ..+|.+| .|++|......+..++
T Consensus 260 ~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql 333 (361)
T PRK06690 260 PIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQA 333 (361)
T ss_pred HHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHHH
Confidence 47899999999999999999997652 12234455677888863 2444442 3667777777777776
Q ss_pred HHc
Q 009935 258 LQV 260 (522)
Q Consensus 258 L~~ 260 (522)
-+.
T Consensus 334 ~~~ 336 (361)
T PRK06690 334 KRE 336 (361)
T ss_pred HHh
Confidence 543
No 176
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=84.07 E-value=3.3 Score=37.05 Aligned_cols=69 Identities=22% Similarity=0.332 Sum_probs=46.1
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC--------CCchHHHHHHHHHHHHH
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG--------MGCSAGLISIDLAKQLL 258 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~AL~lA~~lL 258 (522)
..|++++|+++|++++|||.+=++-. .-...-...+.||+.+ ..+|.+| .||+|....++++.+|-
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHHH
Confidence 78999999999999999999976621 1233455677788763 3456655 36777777788888876
Q ss_pred HcC
Q 009935 259 QVH 261 (522)
Q Consensus 259 ~~~ 261 (522)
+.+
T Consensus 99 ~~~ 101 (123)
T PF02803_consen 99 RRG 101 (123)
T ss_dssp HHT
T ss_pred Hhc
Confidence 543
No 177
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=83.86 E-value=8 Score=41.13 Aligned_cols=58 Identities=10% Similarity=-0.119 Sum_probs=38.1
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcCCCcc------------------cccccccccccccccccchHHHHHHHHHH
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLELSEW------------------HMEPSRMTLYRFGNTSSSSLWYELAYSEA 459 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lgl~~e------------------~~~~S~~tl~r~GNtsSasi~~~La~~~~ 459 (522)
..+|||.+-+|-.....--...+.||+.+. .+.+|= -+--+||...++=...+.++..
T Consensus 273 ~~~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~G-G~la~GhP~gatG~~~v~e~~~ 348 (385)
T PRK12578 273 TPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFG-GLKAKGHPLGATGLSMIYEITK 348 (385)
T ss_pred CHHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCC-CcccCCCCccHHHHHHHHHHHH
Confidence 358999999999988777778889999762 332211 1234788776655555544433
No 178
>PLN03169 chalcone synthase family protein; Provisional
Probab=83.40 E-value=3.6 Score=43.99 Aligned_cols=88 Identities=15% Similarity=0.210 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE------EEecCCCchHHHHHHHHH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS------YNLGGMGCSAGLISIDLA 254 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~g~gCsggl~AL~lA 254 (522)
.+....-..++++|+++|++++|||.+.+...+.+ ..+-..++++||++++-.. -+.+++++++-..+|+.+
T Consensus 278 ~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n--~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~ 355 (391)
T PLN03169 278 KIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGG--PAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM 355 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCC--HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH
Confidence 34555667789999999999999994433323222 5667789999999854332 367778888888888766
Q ss_pred HHH--HH-cCCCCeEEEEE
Q 009935 255 KQL--LQ-VHPNSYALVVS 270 (522)
Q Consensus 255 ~~l--L~-~~~~~~aLVVs 270 (522)
.+- ++ ..+++++|+++
T Consensus 356 ~~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 356 REELKKKGEEDEEWGLILA 374 (391)
T ss_pred HHhhcccCCCCCcEEEEEE
Confidence 431 11 12346666665
No 179
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=83.36 E-value=2.1 Score=45.88 Aligned_cols=91 Identities=21% Similarity=0.287 Sum_probs=53.5
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC--------CCchHHHHHHHHHHHHH
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG--------MGCSAGLISIDLAKQLL 258 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~AL~lA~~lL 258 (522)
..|++++|+++|++|+|||++=++- ......-.-.+.||+.+ ..+|++| .|++|....++++.+|-
T Consensus 298 ~~a~~~al~~agl~~~Did~~ei~d----~fa~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~ 371 (397)
T PRK06954 298 VGAIRKLFEKNGWRAAEVDLFEINE----AFAVVTMAAMKEHGLPH--EKVNVNGGACALGHPIGASGARILVTLIGALR 371 (397)
T ss_pred HHHHHHHHHHcCCCHHHCCEEehhh----HHHHHHHHHHHHhCCCc--ccCCcCCChHHhcccHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999984331 01112223346788753 3456665 13444455555555553
Q ss_pred HcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEec
Q 009935 259 QVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSN 304 (522)
Q Consensus 259 ~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~ 304 (522)
..+ .++. +.+.|.-|-.++|+||++
T Consensus 372 ~~~-g~~~--------------------v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 372 ARG-GKRG--------------------VASLCIGGGEATAMGIEL 396 (397)
T ss_pred hcC-CCeE--------------------EEEEccccchhhEEEEEe
Confidence 321 2222 223466677777777764
No 180
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=82.87 E-value=5 Score=42.69 Aligned_cols=48 Identities=21% Similarity=0.348 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCCCeeEEEecC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRGNITSYNLGG 241 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 241 (522)
..|++++++++|++|+|||.+-.. +. +....+..+.||+.+ ..+|++|
T Consensus 288 ~~a~~~a~~~Agi~~~did~~e~~d~f-----~~~~~~~~e~lg~~~--~pvn~~G 336 (386)
T cd00751 288 VPAIPKALKRAGLTLDDIDLIEINEAF-----AAQALACLKELGLDP--EKVNVNG 336 (386)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeechh-----HHHHHHHHHHhCCCh--hhcCCCc
Confidence 689999999999999999998654 21 223445567888752 2345544
No 181
>PRK05790 putative acyltransferase; Provisional
Probab=82.70 E-value=3.5 Score=44.02 Aligned_cols=67 Identities=21% Similarity=0.326 Sum_probs=43.7
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC--------CCchHHHHHHHHHHHHH
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG--------MGCSAGLISIDLAKQLL 258 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~AL~lA~~lL 258 (522)
..|++++++++|++|+|||.+-++- ......-+..+.||+.+ ..+|++| .|++|....++++++|-
T Consensus 294 ~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~~--~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~ 367 (393)
T PRK05790 294 VPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLDP--EKVNVNGGAIALGHPIGASGARILVTLLHEMK 367 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCh--hhcCCCcchhhhCcchhhhHHHHHHHHHHHHH
Confidence 5799999999999999999986431 12233445667888742 2344443 24556666666666665
Q ss_pred H
Q 009935 259 Q 259 (522)
Q Consensus 259 ~ 259 (522)
.
T Consensus 368 ~ 368 (393)
T PRK05790 368 R 368 (393)
T ss_pred h
Confidence 4
No 182
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=82.67 E-value=5.8 Score=42.38 Aligned_cols=82 Identities=9% Similarity=0.075 Sum_probs=49.2
Q ss_pred cccccEEEEcCCChHHHHHHHHHcCCCcccccccccccccccccccch---HHHHHHHHHHcCCCCCCCEEE-EEEeChh
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSS---LWYELAYSEAKGRMRKGDRTW-QIAFGSG 477 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSas---i~~~La~~~~~g~l~~Gd~Vl-liafGsG 477 (522)
.+|||.+=+|-.-....=...|.||++.+++.+|=-.+ -+||-..+| +..+|.+.++. +.|.+.+ .+..|.|
T Consensus 302 ~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~l-a~GHP~GatG~~~~~~l~~qL~~---~~~~~g~~~~c~~gg 377 (388)
T PRK06366 302 IDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAV-AIGHPIGNSGSRIIVTLINALKT---RHMKTGLATLCHGGG 377 (388)
T ss_pred HHHcceeeccchhHHHHHHHHHHhCCCCCccCCCCchh-hhCCCcCCCHHHHHHHHHHHHHh---cCCCeEEEEEecccC
Confidence 58999999999887777778899999988886533333 356664444 33444443332 2222322 2334444
Q ss_pred HhhhheeeEEe
Q 009935 478 FKCNSAVWQAL 488 (522)
Q Consensus 478 ~~~~s~v~r~~ 488 (522)
.-.+++++.+
T Consensus 378 -~g~a~~~e~~ 387 (388)
T PRK06366 378 -GAHTLTLEMV 387 (388)
T ss_pred -hhhEEEEEec
Confidence 3356677654
No 183
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=82.54 E-value=9.9 Score=40.59 Aligned_cols=82 Identities=10% Similarity=-0.046 Sum_probs=48.5
Q ss_pred cccccEEEEcCCChHHHHHHHHHcCCCc---ccccccccccccccccccc---hHHHHHHHHHHcCCCCCCCEEEEEEeC
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLELSE---WHMEPSRMTLYRFGNTSSS---SLWYELAYSEAKGRMRKGDRTWQIAFG 475 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lgl~~---e~~~~S~~tl~r~GNtsSa---si~~~La~~~~~g~l~~Gd~VlliafG 475 (522)
.+|||.+=+|-.-....=...+.||+-+ +++.++=- +--+||...+ .+...|.+...+ +.+.+.+....|
T Consensus 297 p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~GG-~la~GhP~GATG~r~v~~l~~~l~~---~~~~~Gl~~~~~ 372 (385)
T TIGR02445 297 ISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGG-AIALGHPLGCSGARISTTLLNLMEQ---KDATFGLATMCI 372 (385)
T ss_pred HHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCCc-hhhcCCCccccHHHHHHHHHHHHHh---cCCCeEEEEEec
Confidence 5899999999988777777789999843 45554222 2235665444 444555554432 334445544444
Q ss_pred hhHhhhheeeEE
Q 009935 476 SGFKCNSAVWQA 487 (522)
Q Consensus 476 sG~~~~s~v~r~ 487 (522)
.|-.-.+++++.
T Consensus 373 g~g~g~a~~~e~ 384 (385)
T TIGR02445 373 GLGQGIATVFER 384 (385)
T ss_pred ccChhheEEEEe
Confidence 444445666664
No 184
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=82.25 E-value=12 Score=39.85 Aligned_cols=58 Identities=10% Similarity=-0.131 Sum_probs=42.3
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcCCCcc------------------cccccccccccccccccchHHHHHHHHHH
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLELSEW------------------HMEPSRMTLYRFGNTSSSSLWYELAYSEA 459 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lgl~~e------------------~~~~S~~tl~r~GNtsSasi~~~La~~~~ 459 (522)
.++|||.+-+|-......-...+.||+.++ .+.+|=- +--+||...++=.+.+.++..
T Consensus 276 ~~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG-~la~Ghp~gasG~~~~~e~~~ 351 (389)
T PRK07516 276 TLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGG-LKAKGHPIGATGVSMHVLAAM 351 (389)
T ss_pred CHHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCC-cccCCCCccHHHHHHHHHHHH
Confidence 358999999999988887778899999875 3432222 335899998777777666544
No 185
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=82.04 E-value=9.1 Score=40.89 Aligned_cols=82 Identities=11% Similarity=-0.060 Sum_probs=46.5
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcCCCc---ccccccccccccccccccchH---HHHHHHHHHcCCCCCCCEEEEEEe
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLELSE---WHMEPSRMTLYRFGNTSSSSL---WYELAYSEAKGRMRKGDRTWQIAF 474 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lgl~~---e~~~~S~~tl~r~GNtsSasi---~~~La~~~~~g~l~~Gd~Vlliaf 474 (522)
..+|||.+=+|-.-....-...|.||+.+ +.+.++- -+--+||...++= ..+|.+.++. +.+.+.+.-..
T Consensus 298 ~~~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~G-G~la~GhP~GAtG~~~v~~l~~~L~~---~~~~~gl~~~~ 373 (387)
T PRK08947 298 SISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNG-GAIALGHPLGCSGARISTTLLNLMER---KDAQFGLATMC 373 (387)
T ss_pred CHHHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCCC-chhhcCCCccccHHHHHHHHHHHHHh---cCCCEEEEEEe
Confidence 35899999999998887777889999844 4554322 2334677655544 3444443322 33334443334
Q ss_pred ChhHhhhheeeE
Q 009935 475 GSGFKCNSAVWQ 486 (522)
Q Consensus 475 GsG~~~~s~v~r 486 (522)
|.|-...+++++
T Consensus 374 ~g~G~g~a~~~e 385 (387)
T PRK08947 374 IGLGQGIATVFE 385 (387)
T ss_pred ecccceeEEEEE
Confidence 423234445554
No 186
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=82.02 E-value=3 Score=43.89 Aligned_cols=70 Identities=17% Similarity=0.133 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE-E--E-ecCCCchHHHHHHHHH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS-Y--N-LGGMGCSAGLISIDLA 254 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~-~--d-l~g~gCsggl~AL~lA 254 (522)
.+....-.+++++|+++|++++|||.++++.. .+.+-..+.++||++++-.. . + .++++.++...+|+.+
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~----~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~ 312 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQS----NAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL 312 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH
Confidence 45556677899999999999999999997642 23456789999999854322 1 2 3455666666666533
No 187
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=80.78 E-value=3.1 Score=44.48 Aligned_cols=92 Identities=23% Similarity=0.412 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC--------CCchHHHHHHHHHHHH
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG--------MGCSAGLISIDLAKQL 257 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~AL~lA~~l 257 (522)
...|++++|+++|++|+|||.+-++- ..+...-.-.+.||+.+ ..+|.+| .|++|....++++.+|
T Consensus 291 ~~~a~~~al~~agl~~~did~~ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL 364 (391)
T PRK07661 291 PIAAIPKALKLAGLELSDIGLFELNE----AFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCC----HHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHHH
Confidence 46899999999999999999987441 11222333446788742 2345544 2455555666666666
Q ss_pred HHcCCCCeEEEEEecccccccccCCCccccccccccccceEEEEEec
Q 009935 258 LQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSN 304 (522)
Q Consensus 258 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvLLs~ 304 (522)
-+.+ .++.| .+.|.-|..+.|+||++
T Consensus 365 ~~~~-~~~g~--------------------~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 365 KRRN-EQFGI--------------------VTMCIGGGMGAAGVFEL 390 (391)
T ss_pred HhcC-CCeEE--------------------EEEccccChhhEEEEEe
Confidence 5432 23333 23366666677777764
No 188
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=79.48 E-value=5.5 Score=40.71 Aligned_cols=92 Identities=12% Similarity=0.131 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCC-ee------EEEecCCCchHHHHH
Q 009935 178 ARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGN-IT------SYNLGGMGCSAGLIS 250 (522)
Q Consensus 178 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~-~~------~~dl~g~gCsggl~A 250 (522)
..+.+......+++++|++.|++ +|||.++...... +..-..+.+++++++. +. .-+..+++|+....+
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 34566778899999999999999 9999887654221 1566788899997421 11 234556666666666
Q ss_pred HHHHHHHHHcCCCCeEEEEEecc
Q 009935 251 IDLAKQLLQVHPNSYALVVSMEN 273 (522)
Q Consensus 251 L~lA~~lL~~~~~~~aLVVs~E~ 273 (522)
|+.+-.--+-.+++++|+++.-.
T Consensus 293 L~~~~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 293 LASLLESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHHHHhcCCCCCCCEEEEEEecc
Confidence 66553211112467888877543
No 189
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=77.82 E-value=5.3 Score=42.52 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=43.0
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC--------CCchHHHHHHHHHHHHH
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG--------MGCSAGLISIDLAKQLL 258 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~AL~lA~~lL 258 (522)
..|+++|++++|++|+|||++=++- ......-+..+.||+.+ ..+|.+| .|++|....++++++|-
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~d----~Fa~~~~~~~e~lG~~~--~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~ 356 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEINE----AFAPVVLAWLKETGADP--AKVNPNGGAIALGHPLGATGAKLMTTLLHELE 356 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeecc----cchHHHHHHHHHhCCCc--hhcCCCcchhhhcCcHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999985441 11233455567788763 3567765 13344445555555554
Q ss_pred H
Q 009935 259 Q 259 (522)
Q Consensus 259 ~ 259 (522)
.
T Consensus 357 ~ 357 (382)
T PRK07801 357 R 357 (382)
T ss_pred h
Confidence 4
No 190
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=77.68 E-value=9.6 Score=40.97 Aligned_cols=54 Identities=11% Similarity=-0.044 Sum_probs=32.6
Q ss_pred cccccEEEEcCCChHHHHHHHHHcCCC--cccccccccccccccccccchHHHHHHH
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLELS--EWHMEPSRMTLYRFGNTSSSSLWYELAY 456 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lgl~--~e~~~~S~~tl~r~GNtsSasi~~~La~ 456 (522)
.+|||.+=+|-.-....=...+.||+. ..++.++- -+--+||...++=...+.+
T Consensus 313 ~~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~G-G~la~GhP~gAtG~~~~~e 368 (401)
T PRK08131 313 LDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNG-GAIAVGHPLGASGARLALT 368 (401)
T ss_pred HHHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCCc-cHHhcCCchhhhHHHHHHH
Confidence 588999988887655444467889985 33443211 1224788875554444433
No 191
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=77.11 E-value=6 Score=42.05 Aligned_cols=74 Identities=11% Similarity=0.111 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec-CCCCCccHHHHHHHHcCCCCC-----------eeEEEecCCCchHH
Q 009935 180 NEAEMVMFGAIDELLSKTGVKAKDIGILVVNCS-LFCPTPSLSAMIVNHYKLRGN-----------ITSYNLGGMGCSAG 247 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s-~~~~~Ps~a~~I~~~LGl~~~-----------~~~~dl~g~gCsgg 247 (522)
+...+...++.+++|+++|++++|||.+++... .-....+. ..+.++++.+.+ ...=.+.+++|++.
T Consensus 201 ~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~ 279 (379)
T TIGR01835 201 EQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSL 279 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHH
Confidence 345556678999999999999999999987652 11112222 235566665421 11236667777777
Q ss_pred HHHHHHH
Q 009935 248 LISIDLA 254 (522)
Q Consensus 248 l~AL~lA 254 (522)
..+|.-+
T Consensus 280 ~l~L~~~ 286 (379)
T TIGR01835 280 YLGLASL 286 (379)
T ss_pred HHHHHHH
Confidence 7777544
No 192
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=75.94 E-value=6.7 Score=41.78 Aligned_cols=48 Identities=23% Similarity=0.371 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCCCeeEEEecC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRGNITSYNLGG 241 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 241 (522)
..|++++++++|++|+|||++-+. |. +...-+..+.||+. ...+|.+|
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~~d~f-----a~~~~~~~e~lG~~--~~pvn~~G 337 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEINEAF-----AAQVLACIKELGLD--LEKVNVNG 337 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeehcchh-----HHHHHHHHHHhCCC--hhhcCCCC
Confidence 589999999999999999998443 22 22334445788874 23466665
No 193
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=75.50 E-value=9.8 Score=40.00 Aligned_cols=43 Identities=9% Similarity=0.042 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRG 232 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~ 232 (522)
...|++++|+++|++++|||++=++.. .+...-+..+.||+.+
T Consensus 253 ~~~a~~~al~~Agl~~~did~~ei~d~----F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 253 ARLAARRAYKMAGITPDDIDVAELYDC----FTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCC
Confidence 468999999999999999999865521 2334556667788764
No 194
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=75.18 E-value=7.6 Score=41.57 Aligned_cols=51 Identities=25% Similarity=0.348 Sum_probs=37.2
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCch
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCS 245 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCs 245 (522)
..|++++++++|++|+|||++=++ +- +...-+..+.||+.+. .+|.+| |.-
T Consensus 291 ~~a~~~a~~~agl~~~Did~~Ei~d~F-----a~~~l~~~e~lG~~~~--pvN~~G-G~l 342 (390)
T PRK06504 291 LPATERALKKAGMKIDDIDLYEVNEAF-----ASVPLAWLKATGADPE--RLNVNG-GAI 342 (390)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecccc-----hHHHHHHHHHhCCCCC--CcCCCC-cHH
Confidence 569999999999999999998554 32 2334466788998743 477776 443
No 195
>PRK06059 lipid-transfer protein; Provisional
Probab=74.74 E-value=24 Score=37.76 Aligned_cols=58 Identities=14% Similarity=-0.018 Sum_probs=36.6
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcCCCcc------------------cccccccccccccccccchHHHHHHHHHH
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLELSEW------------------HMEPSRMTLYRFGNTSSSSLWYELAYSEA 459 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lgl~~e------------------~~~~S~~tl~r~GNtsSasi~~~La~~~~ 459 (522)
..+|||.+-+|-.-....=...+.||+.+. .+.+| --+--+||...++-...+.++..
T Consensus 289 ~~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~Ghp~gatG~~~~~e~~~ 364 (399)
T PRK06059 289 GPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPS-GGLACFGEAIPAQAIAQVCELTW 364 (399)
T ss_pred CHHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCC-CccccCCccCCccHHHHHHHHHH
Confidence 358999999999854444444599999863 33221 11334788887766666655444
No 196
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=74.47 E-value=10 Score=37.36 Aligned_cols=58 Identities=21% Similarity=0.222 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc-cHHHHHHHHcCCCCCeeEEEecC
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP-SLSAMIVNHYKLRGNITSYNLGG 241 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-s~a~~I~~~LGl~~~~~~~dl~g 241 (522)
+.....++++|.++|++++|||.|.|++.|+..+- -++.-+++-|.+.-+++.+.++.
T Consensus 39 e~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 39 ERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 34578899999999999999999999998875544 33444555555555677888884
No 197
>PRK06158 thiolase; Provisional
Probab=73.64 E-value=24 Score=37.52 Aligned_cols=30 Identities=3% Similarity=-0.181 Sum_probs=24.8
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcCCCcc
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLELSEW 430 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lgl~~e 430 (522)
.++|||.+-+|-.-.-.--...|.||+.+.
T Consensus 270 ~p~DId~~ElyD~Fs~~~l~~~E~lG~~~~ 299 (384)
T PRK06158 270 TPADIDVVELYDAFTINTILFLEDLGFCAK 299 (384)
T ss_pred CHHHCcEEEecCCchHHHHHHHHHcCCCCC
Confidence 358999999999987777777899998755
No 198
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=72.86 E-value=17 Score=39.43 Aligned_cols=56 Identities=5% Similarity=-0.114 Sum_probs=31.9
Q ss_pred cccccEEEEcCCChHHHHHHHHHcC-----------------CCcccccccccccccccccccchHHHHHHHHH
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLE-----------------LSEWHMEPSRMTLYRFGNTSSSSLWYELAYSE 458 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lg-----------------l~~e~~~~S~~tl~r~GNtsSasi~~~La~~~ 458 (522)
.+|||.+-+|-.-....=...+.|| ++.+.+.+|=- +--+||...++=...+.++.
T Consensus 328 ~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG-~la~GhP~gatG~~~v~e~~ 400 (430)
T TIGR02446 328 LSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGG-SIAYGHPFAATGARMITQTL 400 (430)
T ss_pred HHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCC-HHhcCCCccccHHHHHHHHH
Confidence 5889999999886555444455554 44444432111 22378887665544444433
No 199
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=72.72 E-value=6.5 Score=39.82 Aligned_cols=58 Identities=22% Similarity=0.240 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc-----cHHHHHHHHcCCCCCeeEEEec
Q 009935 178 ARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP-----SLSAMIVNHYKLRGNITSYNLG 240 (522)
Q Consensus 178 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-----s~a~~I~~~LGl~~~~~~~dl~ 240 (522)
.|+..+.+ ...++++|+++|++++|||.+.++..|+..+. +.+--++..++ ++.+.++
T Consensus 26 ~r~H~~~L-~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~----~Pli~v~ 88 (268)
T PF00814_consen 26 SRQHSENL-PPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALN----IPLIGVS 88 (268)
T ss_dssp HHHHHHHH-HHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT------EEEEE
T ss_pred HHHHHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhC----CCeEeec
Confidence 34444444 58999999999999999999999998876544 22333444443 4566666
No 200
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=71.70 E-value=22 Score=38.51 Aligned_cols=25 Identities=20% Similarity=0.359 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN 210 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~ 210 (522)
...|++++++++|++|+|||++=++
T Consensus 311 ~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 311 PAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec
Confidence 3579999999999999999999665
No 201
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=71.53 E-value=17 Score=38.83 Aligned_cols=74 Identities=15% Similarity=0.123 Sum_probs=43.7
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCC---CeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRG---NITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~---~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
.++++++|+++|++|+|||.+... +.+..-.+.-...|.+.||-+. ..+. .+....+++|+..+-.+...|+.+
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~-~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKG-LTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCc-ccccChhhcchHHHHHHHHHHhcC
Confidence 589999999999999999998755 4433223555566777776321 1111 223334444554444444444543
No 202
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=71.50 E-value=1.3 Score=39.00 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=44.3
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCC---CeeEE----EecCCCchHHHHHHHHHHHHH
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRG---NITSY----NLGGMGCSAGLISIDLAKQLL 258 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~---~~~~~----dl~g~gCsggl~AL~lA~~lL 258 (522)
.++++++|+++|++|+|||.|... +....-.+.-+.-+.+-|+-.. .+..- .+.....++++..|-.+--.|
T Consensus 28 ~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~l 107 (119)
T PF02801_consen 28 ARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLAL 107 (119)
T ss_dssp HHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHHH
Confidence 788999999999999999999755 4332233455566666666431 12222 233345566776766666666
Q ss_pred HcC
Q 009935 259 QVH 261 (522)
Q Consensus 259 ~~~ 261 (522)
+.+
T Consensus 108 ~~~ 110 (119)
T PF02801_consen 108 EHG 110 (119)
T ss_dssp HHT
T ss_pred hcC
Confidence 654
No 203
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=71.37 E-value=28 Score=37.29 Aligned_cols=77 Identities=14% Similarity=0.034 Sum_probs=47.5
Q ss_pred ccccccEEEEcCCChHHHHHHHHHcCCCcc------------------cccccccccccccccccchHHHHHHHHHHc--
Q 009935 401 FKLAFEHFCIHAGGRAVLDELEKNLELSEW------------------HMEPSRMTLYRFGNTSSSSLWYELAYSEAK-- 460 (522)
Q Consensus 401 ~~~did~f~~H~~g~~vl~~i~~~Lgl~~e------------------~~~~S~~tl~r~GNtsSasi~~~La~~~~~-- 460 (522)
..+|||.+-+|-.-....-...|.||+.+. .+.+|= -+--+||...++=...+.++..+
T Consensus 292 ~~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~G-G~la~Ghp~gatG~~~~~e~~~QLr 370 (403)
T PRK06289 292 GLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSG-GLIGGGHPVGASGVRMLLDAAKQVT 370 (403)
T ss_pred CHHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCC-CccccCCCccchHHHHHHHHHHHHh
Confidence 358999999999988877778899998763 232211 12348998766666555554442
Q ss_pred CC-----CCCCCEEEEEEeChhH
Q 009935 461 GR-----MRKGDRTWQIAFGSGF 478 (522)
Q Consensus 461 g~-----l~~Gd~VlliafGsG~ 478 (522)
|+ ++..+..+..+.|.|.
T Consensus 371 g~ag~~Qv~~~~~~l~~~~gg~~ 393 (403)
T PRK06289 371 GTAGDYQVEGAKTFGTLNIGGST 393 (403)
T ss_pred ccccCccCCchheEEEEecCccc
Confidence 21 2222345555666543
No 204
>PRK07937 lipid-transfer protein; Provisional
Probab=70.68 E-value=32 Score=36.29 Aligned_cols=73 Identities=15% Similarity=-0.013 Sum_probs=47.6
Q ss_pred cccccEEEEcCCChHHHHHHHHHcCCCc-ccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEeCh
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLELSE-WHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGS 476 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lgl~~-e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGs 476 (522)
++|||.+=+|-.-....-...+.||+.. ..+.+|=-.+. ||-..++=...+.++..+=+=+..++.+..+.|.
T Consensus 264 ~~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~--ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~~Gg 337 (352)
T PRK07937 264 AGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA--ANPMFAAGLERIGEAARHIWDGSARRALAHATSG 337 (352)
T ss_pred HHHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccchh--cCchhHHHHHHHHHHHHHHhccCCCEEEEecccc
Confidence 5899999999998887778889999954 46665555564 6665555555555444421112346666666664
No 205
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=70.18 E-value=13 Score=39.62 Aligned_cols=40 Identities=18% Similarity=0.289 Sum_probs=30.2
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLR 231 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~ 231 (522)
..|++++++++|++|+|||++-.+ +.+ ...-+..+.||+.
T Consensus 261 ~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl~ 301 (389)
T PRK06064 261 VVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCCC
Confidence 579999999999999999998554 332 2345567778874
No 206
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=70.02 E-value=12 Score=33.16 Aligned_cols=62 Identities=10% Similarity=0.118 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC--CCCccHHHHHHHHc-CCCCCeeEEEecCCCchH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLF--CPTPSLSAMIVNHY-KLRGNITSYNLGGMGCSA 246 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~--~~~Ps~a~~I~~~L-Gl~~~~~~~dl~g~gCsg 246 (522)
|..+-..+-.++.+++.+++++||--++|..++| ...| +..++++ |+. +++-++...|.=-|
T Consensus 17 ~I~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~Gw~-~Vplmc~qEm~V~g 81 (117)
T TIGR01796 17 EIGEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFP---AAAARGLPGWT-DVPVMCAQEIPVEG 81 (117)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccCh---HHHHHhccCCC-CcceeccCcCCCCC
Confidence 3334444555677788999999999999997764 4566 4455566 987 78877777654443
No 207
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=68.59 E-value=13 Score=39.77 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=46.1
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCCC----------------eeEEEecC--------
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRGN----------------ITSYNLGG-------- 241 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~~----------------~~~~dl~g-------- 241 (522)
..|++++|+++|++|+|||++-++ +. +...-+..+.||+.+. -..+|.+|
T Consensus 272 ~~A~~~al~~Agi~~~DID~~Ei~d~F-----a~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP 346 (393)
T cd00826 272 IEAARKALEKAGLGIGDLDLIEAHDAF-----AANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHP 346 (393)
T ss_pred HHHHHHHHHHcCCCHHHcCeeehhhhh-----HHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCC
Confidence 689999999999999999988655 32 2334455667776531 13566655
Q ss_pred CCchHHHHHHHHHHHHHH
Q 009935 242 MGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 242 ~gCsggl~AL~lA~~lL~ 259 (522)
.||+|....++++.+|-.
T Consensus 347 ~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 347 IGASGAAICAELCFELKG 364 (393)
T ss_pred ccccHHHHHHHHHHHHhh
Confidence 255666677777777754
No 208
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=68.01 E-value=9.1 Score=40.49 Aligned_cols=76 Identities=16% Similarity=0.109 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCC-CCee----EEEecCCCchHHHHHHHHHHHHHH
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLR-GNIT----SYNLGGMGCSAGLISIDLAKQLLQ 259 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~-~~~~----~~dl~g~gCsggl~AL~lA~~lL~ 259 (522)
..++++++|+++|++++|||.+... +++..-.+.-+..+..-++-+ +.+. .-.+....+++|+..+-.+...|+
T Consensus 277 ~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~ 356 (406)
T cd00834 277 AARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALR 356 (406)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHh
Confidence 3679999999999999999999866 444334444555566666642 1121 112233456667777766666676
Q ss_pred cC
Q 009935 260 VH 261 (522)
Q Consensus 260 ~~ 261 (522)
.+
T Consensus 357 ~~ 358 (406)
T cd00834 357 DG 358 (406)
T ss_pred cC
Confidence 65
No 209
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=67.11 E-value=13 Score=39.86 Aligned_cols=67 Identities=22% Similarity=0.272 Sum_probs=42.3
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC--------CCchHHHHHHHHHHHHH
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG--------MGCSAGLISIDLAKQLL 258 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~AL~lA~~lL 258 (522)
..+++++|+++|++|+|||.+=++- ..+...-+..+.||+.+ ..+|.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINE----AFSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999986541 11233445566778742 2344443 24555555666666654
Q ss_pred H
Q 009935 259 Q 259 (522)
Q Consensus 259 ~ 259 (522)
.
T Consensus 368 ~ 368 (394)
T PLN02644 368 S 368 (394)
T ss_pred h
Confidence 3
No 210
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=66.63 E-value=26 Score=37.87 Aligned_cols=19 Identities=16% Similarity=0.293 Sum_probs=15.8
Q ss_pred cccccccceEEEEEecCCC
Q 009935 289 SNCLFRMGGAAILLSNRSS 307 (522)
Q Consensus 289 ~~~lfgDGAAAvLLs~~~~ 307 (522)
..|..+|||+|+||++...
T Consensus 262 ~~s~~~DGAaA~vl~s~e~ 280 (426)
T PRK08170 262 NSSQITDGACWLLLASEEA 280 (426)
T ss_pred ccCCCCCceEEEEEecHHH
Confidence 4588999999999997653
No 211
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=66.29 E-value=11 Score=36.24 Aligned_cols=36 Identities=22% Similarity=0.348 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP 218 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P 218 (522)
.+.....++++|+++|++++|||.+.++..|+..+.
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTG 69 (202)
T TIGR03725 34 SEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTG 69 (202)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHh
Confidence 345577999999999999999999999998876555
No 212
>PRK07855 lipid-transfer protein; Provisional
Probab=66.11 E-value=19 Score=38.43 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=21.3
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN 210 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~ 210 (522)
..|++++++++|++|+|||++=+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 479999999999999999998554
No 213
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=66.09 E-value=12 Score=40.17 Aligned_cols=67 Identities=27% Similarity=0.390 Sum_probs=41.2
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCCCeeEEEecC--------CCchHHHHHHHHHHHH
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRGNITSYNLGG--------MGCSAGLISIDLAKQL 257 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~AL~lA~~l 257 (522)
..|++++|+++|++|+|||++=++ +. ....-+-.+.||+. ...+|++| .|++|....+.++.+|
T Consensus 293 ~~a~~~Al~~AGl~p~DID~~ei~daf-----a~~~l~~~~~l~~~--~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL 365 (392)
T PRK06633 293 VPASQKALSKAGWSVNDLEVIEVNEAF-----AAQSIYVNREMKWD--MEKVNINGGAIAIGHPIGASGGRVLITLIHGL 365 (392)
T ss_pred HHHHHHHHHHcCCCHHHcCeeehhhHH-----HHHHHHHHhhhCCC--ccccCCCCchHhhCCcHHHHHHHHHHHHHHHH
Confidence 689999999999999999998644 11 00011123445543 22345544 2556666677777776
Q ss_pred HHc
Q 009935 258 LQV 260 (522)
Q Consensus 258 L~~ 260 (522)
-+.
T Consensus 366 ~~~ 368 (392)
T PRK06633 366 RRA 368 (392)
T ss_pred Hhc
Confidence 553
No 214
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=66.05 E-value=21 Score=36.83 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP 218 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P 218 (522)
+.....++++|+++|++++|||.+.++..|+..+.
T Consensus 50 ~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tg 84 (305)
T TIGR00329 50 ENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGS 84 (305)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhh
Confidence 44578889999999999999999999988875433
No 215
>PRK09604 UGMP family protein; Validated
Probab=65.29 E-value=23 Score=36.98 Aligned_cols=48 Identities=17% Similarity=0.164 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc-----cHHHHHHHHcCC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP-----SLSAMIVNHYKL 230 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-----s~a~~I~~~LGl 230 (522)
.+.....++++|+++|++++|||.+.+++.|...+. +.+.-++..++.
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC
Confidence 345678899999999999999999999988764333 234445555544
No 216
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=65.02 E-value=16 Score=38.34 Aligned_cols=45 Identities=13% Similarity=0.123 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKL 230 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 230 (522)
...|++++|+++|++|+|||.+-.. |++..-.+.-...|.+-||-
T Consensus 208 ~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 208 AYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 4789999999999999999987644 55444456667778888874
No 217
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=64.48 E-value=11 Score=40.07 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=32.3
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKL 230 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 230 (522)
..|++++|+++|++|+|||.+-.. +.+..-.+.-..-+..-||-
T Consensus 279 ~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 279 ARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 689999999999999999999754 54433344445566666763
No 218
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=63.63 E-value=25 Score=36.91 Aligned_cols=91 Identities=22% Similarity=0.177 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccH--HHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHH
Q 009935 178 ARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSL--SAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAK 255 (522)
Q Consensus 178 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~--a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~ 255 (522)
+|...+ .+...++++|+++|++.+|||+|-++..|+- .+++ ....++.|.+.-+.+-+.++ -|-|=+.+-.+..
T Consensus 47 sr~H~e-~i~~li~~al~eA~~~~~dID~IA~T~gPGL-~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a~~l~~ 122 (342)
T COG0533 47 SRHHVE-NIPPLIEEALAEAGVSLEDIDAIAVTAGPGL-GGALLVGATAAKALALALNKPLIPVN--HLEGHIEAARLET 122 (342)
T ss_pred HHHHHH-HHHHHHHHHHHHcCCCcccCCEEEEecCCCc-hhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHHHHhcc
Confidence 344433 4567889999999999999999988877763 2322 33344444333345678887 4666555444333
Q ss_pred HHHHcCCCCeEEEEEecccc
Q 009935 256 QLLQVHPNSYALVVSMENIT 275 (522)
Q Consensus 256 ~lL~~~~~~~aLVVs~E~~s 275 (522)
+. ...--+|+||+-...
T Consensus 123 ~~---~~p~v~LlVSGGHTq 139 (342)
T COG0533 123 GL---AFPPVALLVSGGHTQ 139 (342)
T ss_pred CC---CCCcEEEEEecCceE
Confidence 22 123468888877643
No 219
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=63.30 E-value=13 Score=39.51 Aligned_cols=45 Identities=20% Similarity=0.183 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcC
Q 009935 185 VMFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYK 229 (522)
Q Consensus 185 l~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 229 (522)
-..+|++++|+++|++|+|||.+... +++..-.+.-+..+.+-+|
T Consensus 275 ~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~ 320 (407)
T cd00828 275 GIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320 (407)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHh
Confidence 34789999999999999999998755 5443334444555555555
No 220
>PRK08256 lipid-transfer protein; Provisional
Probab=62.73 E-value=22 Score=37.95 Aligned_cols=68 Identities=16% Similarity=0.165 Sum_probs=43.7
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCC----------------eeEEEecC--------C
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGN----------------ITSYNLGG--------M 242 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~----------------~~~~dl~g--------~ 242 (522)
..|++++++++|++++|||.+-+.- ..+...-+..+.||+.+. -..+|.+| .
T Consensus 267 ~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~ 342 (391)
T PRK08256 267 RAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPL 342 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCc
Confidence 5799999999999999999986551 122334455677777643 12566665 2
Q ss_pred CchHHHHHHHHHHHHH
Q 009935 243 GCSAGLISIDLAKQLL 258 (522)
Q Consensus 243 gCsggl~AL~lA~~lL 258 (522)
||+|.....+++++|-
T Consensus 343 gasG~~~~~e~~~QL~ 358 (391)
T PRK08256 343 GATGLAQCAELTWQLR 358 (391)
T ss_pred cHHHHHHHHHHHHHhc
Confidence 3445555556665554
No 221
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=62.70 E-value=11 Score=33.68 Aligned_cols=83 Identities=17% Similarity=0.096 Sum_probs=49.1
Q ss_pred cccccEEEEcCCChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EEeChhHhh
Q 009935 402 KLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQ-IAFGSGFKC 480 (522)
Q Consensus 402 ~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~Vll-iafGsG~~~ 480 (522)
.+|+|.|=+|-.-....=...+.||++++++.++=-.+. +||...+|=...+.++..+=+-+.|++.+. +..|.|. -
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la-~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~-g 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALA-LGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQ-G 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHH-H-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTE-E
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCccccccc-ccccccccccchhhhhHHHHHHhchhhhhHHhccccee-e
Confidence 589999999999988888899999999999875333333 788766654433333332211134566554 4444443 3
Q ss_pred hheeeE
Q 009935 481 NSAVWQ 486 (522)
Q Consensus 481 ~s~v~r 486 (522)
.+++++
T Consensus 117 ~a~lle 122 (123)
T PF02803_consen 117 SAVLLE 122 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 445554
No 222
>PRK14878 UGMP family protein; Provisional
Probab=62.62 E-value=15 Score=38.32 Aligned_cols=52 Identities=19% Similarity=0.249 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc-----cHHHHHHHHcCC
Q 009935 178 ARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP-----SLSAMIVNHYKL 230 (522)
Q Consensus 178 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-----s~a~~I~~~LGl 230 (522)
+|...+.+. .+++++|+++|++++|||.+.++..|...+. +.+..++..++.
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~ 97 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK 97 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC
Confidence 455555555 9999999999999999999999988764432 224445555554
No 223
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=62.44 E-value=24 Score=37.96 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKL 230 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 230 (522)
+.+|.+++|+++|+ |+|||.|..+ |++..-...-+..|.+.|+.
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCC
Confidence 47899999999999 8999998754 54433344556677777774
No 224
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=61.93 E-value=22 Score=38.78 Aligned_cols=41 Identities=22% Similarity=0.321 Sum_probs=31.2
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRG 232 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~ 232 (522)
..|++++++++|++|+|||++=++ |. +...-+..+.||+.+
T Consensus 312 ~~A~~~a~~~AGl~~~DiD~~Ei~daF-----a~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 312 RAAAQKALSMAGVKPSDLQVAEVHDCF-----TIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHcCCCHHHCcEeeecccC-----hHHHHHHHHHcCCCC
Confidence 689999999999999999999655 32 233455667778764
No 225
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=61.73 E-value=25 Score=31.25 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC--CCCccHHHHHHHHcCCCCCeeEEEecCCCchH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLF--CPTPSLSAMIVNHYKLRGNITSYNLGGMGCSA 246 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsg 246 (522)
+..+-..+-.++.+++.+++++||--++|..++| ...| +..++++|.-.+++-++...|.=-|
T Consensus 17 ~I~~at~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~~~~~Vplmc~qE~~V~g 81 (117)
T cd02185 17 EILEATRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFP---AKAARELGGWKYVPLMCAQEMDVPG 81 (117)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccCh---HHHHHhcCCCCCcceeecCcCCCCC
Confidence 3334444555667788999999999999997764 4566 5566667544478777777644433
No 226
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=61.60 E-value=24 Score=37.64 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKL 230 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 230 (522)
...|++++|+++|++|+|||.+... +++..-...-...+..-||.
T Consensus 281 ~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 281 QARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 3679999999999999999999766 44322233334556666664
No 227
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=61.50 E-value=16 Score=38.67 Aligned_cols=45 Identities=13% Similarity=0.135 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKL 230 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 230 (522)
..+|++++|+++|++|+|||.+... +.+..-.+.-...+...||-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 3689999999999999999998754 54433445556667777764
No 228
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=61.21 E-value=23 Score=38.12 Aligned_cols=45 Identities=9% Similarity=0.037 Sum_probs=32.6
Q ss_pred HHHHHHHHHHh-cCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCC
Q 009935 186 MFGAIDELLSK-TGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKL 230 (522)
Q Consensus 186 ~~~Aa~~aL~~-agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 230 (522)
..+|++++|++ +|++|+|||.+-.+ |.+..-.+.-...+.+-||-
T Consensus 285 ~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 285 ARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 47899999999 99999999999755 54433333444557777764
No 229
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=59.70 E-value=8.3 Score=37.64 Aligned_cols=41 Identities=24% Similarity=0.279 Sum_probs=28.0
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhhh
Q 009935 442 FGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNS 482 (522)
Q Consensus 442 ~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s 482 (522)
.|+-.+.|.|...+.+.+.=.+++|++|+=+|-|+|+....
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAl 89 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAAL 89 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHH
Confidence 45446667787888877766799999999999999987543
No 230
>PRK00768 nadE NAD synthetase; Reviewed
Probab=59.08 E-value=2.1e+02 Score=29.19 Aligned_cols=152 Identities=14% Similarity=0.116 Sum_probs=75.7
Q ss_pred HHHHHHHhhhccCCChh-----hHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 009935 126 REIFMERSEQIGCFSEE-----NLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVK 200 (522)
Q Consensus 126 ~~~~~e~~~~~~~~~~e-----~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~ 200 (522)
++++++.++....++.+ -++|++.-++++|.+.--+--.+-. ++.+. ..-+.+++..-+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~l~~~g~~g~VlGlSGGI----DSav~----------a~L~~~A~~~~~~~ 68 (268)
T PRK00768 3 QQEIIAELGVKPTIDPEEEIRRRVDFLKDYLKKSGLKSLVLGISGGQ----DSTLA----------GRLAQLAVEELRAE 68 (268)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEECCCCH----HHHHH----------HHHHHHHHHHhccc
Confidence 45566655544344433 2457777788888654432211111 22222 22233444433321
Q ss_pred CCCcCEEEEe-ecCCC--CCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHH--------HHHHHHc---------
Q 009935 201 AKDIGILVVN-CSLFC--PTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDL--------AKQLLQV--------- 260 (522)
Q Consensus 201 p~dID~LI~~-~s~~~--~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~l--------A~~lL~~--------- 260 (522)
-...+..+++ +.|.. .....+..+++.||+. +...+||.. ...++...+.. |..=+++
T Consensus 69 ~~~~~~~~~~l~mP~~~~~~~~da~~la~~lgi~-~~~~i~I~~-~~~~~~~~l~~~~~~~~~~a~~NiqARlRm~~Ly~ 146 (268)
T PRK00768 69 TGDDDYQFIAVRLPYGVQADEDDAQDALAFIQPD-RVLTVNIKP-AVDASVAALEAAGIELSDFVKGNIKARERMIAQYA 146 (268)
T ss_pred ccCcceeEEEEECCCCCcCCHHHHHHHHHhcCCC-eeEEEECHH-HHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHH
Confidence 1111222223 44532 2346688899999984 478889884 66666554421 1111110
Q ss_pred -CCCCeEEEEEecccccccccCCCccccccccccccceEEEE
Q 009935 261 -HPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAIL 301 (522)
Q Consensus 261 -~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAAAvL 301 (522)
......||+++.+.|..+ .| -.+.+|||++.+-
T Consensus 147 ~An~~~~lvlgT~N~sE~~-~G-------y~TkyGD~~~d~~ 180 (268)
T PRK00768 147 IAGATGGLVVGTDHAAEAV-TG-------FFTKFGDGGADIL 180 (268)
T ss_pred HHccCCCEEEcCCcccHHH-hC-------ceeccCCccccch
Confidence 112356888877765411 11 1367888887764
No 231
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=59.01 E-value=23 Score=39.73 Aligned_cols=45 Identities=13% Similarity=0.208 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKL 230 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 230 (522)
..+|.+++|+++|++|+|||.|-.. |++..-.+.-...|.+-||-
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 3689999999999999999998644 54433334455667777774
No 232
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=58.53 E-value=18 Score=39.06 Aligned_cols=43 Identities=19% Similarity=0.222 Sum_probs=34.6
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYK 229 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 229 (522)
.+|.+.||+++|++|+|||.|-.. ||+..-...-+..|..-||
T Consensus 279 ~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 279 IRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred HHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 699999999999999999999854 6665555666666777777
No 233
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=57.44 E-value=25 Score=37.93 Aligned_cols=44 Identities=16% Similarity=0.146 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYK 229 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 229 (522)
..++++++|+++|++|+|||.+... +++....+.-...|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 4689999999999999999999865 4443334444555666666
No 234
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=57.16 E-value=21 Score=38.28 Aligned_cols=75 Identities=13% Similarity=0.173 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCCCeeEE----EecCCCchHHHHHHHHHHHHHHc
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRGNITSY----NLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~~~~~~----dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
..+|.+++|+++|++|+|||.|... |++..-.+.-+..|.+-||-. .++.. .+....+++++..+-.+-..|+.
T Consensus 272 ~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~ 350 (399)
T cd00832 272 LARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALRD 350 (399)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHhC
Confidence 4789999999999999999988754 554444555566777777743 22221 22222344555444444444554
Q ss_pred C
Q 009935 261 H 261 (522)
Q Consensus 261 ~ 261 (522)
+
T Consensus 351 ~ 351 (399)
T cd00832 351 G 351 (399)
T ss_pred C
Confidence 3
No 235
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=56.94 E-value=67 Score=31.75 Aligned_cols=101 Identities=18% Similarity=0.295 Sum_probs=66.2
Q ss_pred ChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCcc
Q 009935 140 SEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPS 219 (522)
Q Consensus 140 ~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps 219 (522)
+++|..-++.+.++.|+...+..-.... -+..++..-.++++.+....+++++++-| -|+++..|... -+
T Consensus 118 t~rs~~il~~lv~~~g~s~~~~~vrstd--l~vL~l~~~~~~~~~~l~~~~~~a~~edg-----AeaIiLGCAGm---s~ 187 (230)
T COG4126 118 TERSRPILEELVRSYGLSRHCRSVRSTD--LPVLALEGPPEEAEALLVIEAAEALKEDG-----AEAIILGCAGM---SD 187 (230)
T ss_pred CcccHHHHHHHHHhcCccccccceeeCC--CCcccccCChHHHHHHHHHHHHHHhhhcC-----CCEEEEcCccH---HH
Confidence 3445444555677788877765311110 02234444467788888888888887755 67899999753 36
Q ss_pred HHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 220 LSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 220 ~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
++.+++..+|++ .+ .| -..|+.+|-.|++.+
T Consensus 188 la~~Lq~~~gvP----VI--Dg-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 188 LADQLQKAFGVP----VI--DG-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHhCCC----cc--cc-----hHHHHHHHHHHHhhc
Confidence 689999999965 22 33 566778888888765
No 236
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=56.66 E-value=38 Score=35.09 Aligned_cols=55 Identities=15% Similarity=0.114 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc-----cHHHHHHHHcCCCCCeeEEEecC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP-----SLSAMIVNHYKLRGNITSYNLGG 241 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-----s~a~~I~~~LGl~~~~~~~dl~g 241 (522)
.+.....++++|+++|++++|||.+.++..|...+. +.|--++..++ ++.+.++.
T Consensus 50 ~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 50 LEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 345578899999999999999999999988875433 23334444444 44566664
No 237
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=55.71 E-value=49 Score=35.26 Aligned_cols=42 Identities=12% Similarity=0.124 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhcCCC--CCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCC
Q 009935 186 MFGAIDELLSKTGVK--AKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRG 232 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~--p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~ 232 (522)
...|++++++++|++ ++|||++=+. |. +...-+....||+.+
T Consensus 257 ~~~a~~~a~~~Agi~~p~~Did~~el~d~F-----~~~~~~~~e~lGl~~ 301 (386)
T PRK08313 257 GRDAAAALWKAAGITDPRDEIDVAEIYVPF-----SWFEPMWLENLGFAP 301 (386)
T ss_pred HHHHHHHHHHHcCCCCChhhCCEEEeccCC-----hHHHHHHHHHcCCCC
Confidence 357999999999997 6999988543 42 233344556677653
No 238
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.50 E-value=20 Score=38.17 Aligned_cols=44 Identities=16% Similarity=0.280 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYK 229 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 229 (522)
..+|++++|+++|++|+|||.+-.. +++..-.+.-...|.+-||
T Consensus 256 ~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 256 AIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 4799999999999999999998754 5443334444555666666
No 239
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=54.87 E-value=33 Score=36.15 Aligned_cols=50 Identities=16% Similarity=0.158 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc-----cHHHHHHHHcCCC
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP-----SLSAMIVNHYKLR 231 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-----s~a~~I~~~LGl~ 231 (522)
=.+..-+..+++|+++|.+|+|+|+|-|...|+.+.+ +.|-.++.++..+
T Consensus 82 Hr~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 82 HRENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 3445678899999999999999999988877765444 3455555555543
No 240
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=54.53 E-value=21 Score=37.12 Aligned_cols=37 Identities=27% Similarity=0.226 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCC
Q 009935 178 ARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFC 215 (522)
Q Consensus 178 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~ 215 (522)
+|+.++.+... ++++|+++|++++|||.|.++..|..
T Consensus 42 ~~~H~~~l~~~-i~~~l~~~~~~~~did~Iavt~gPg~ 78 (322)
T TIGR03722 42 AEHHAEVAPKL-IKEALEEAGVSLEDIDAVAFSQGPGL 78 (322)
T ss_pred HHHHHHHHHHH-HHHHHHHcCCCHHHCCEEEEecCCch
Confidence 45555555444 99999999999999999999987653
No 241
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.26 E-value=37 Score=36.42 Aligned_cols=44 Identities=16% Similarity=0.081 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYK 229 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 229 (522)
..+|++++|+++|++|+|||.|-.. |.+..-.+.-...+...||
T Consensus 290 ~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 290 ARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 3789999999999999999998644 5443334455667777777
No 242
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=54.06 E-value=57 Score=35.42 Aligned_cols=41 Identities=15% Similarity=0.131 Sum_probs=29.1
Q ss_pred HHHHHHHHHhcCCC--CCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCC
Q 009935 187 FGAIDELLSKTGVK--AKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRG 232 (522)
Q Consensus 187 ~~Aa~~aL~~agi~--p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~ 232 (522)
..|++++++++|++ ++|||++-+. |.+ ...-+..+.||+.+
T Consensus 296 ~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa-----~~~l~~lE~lGl~~ 339 (430)
T PRK06365 296 RMAAKEAYEMAGITDPLNDLDLIELHDAYT-----SSEIQTYEDLGLCK 339 (430)
T ss_pred HHHHHHHHHHcCCCCCHHHCCEEEeecCCc-----HHHHHHHHHcCCCC
Confidence 57999999999997 7999999655 422 22334556666653
No 243
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=53.60 E-value=45 Score=33.21 Aligned_cols=87 Identities=20% Similarity=0.269 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc-cHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcC
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP-SLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVH 261 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-s~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~ 261 (522)
......-++.+|++++++++|||.+-+.-.|+.-.| +..+.+++-+.+=-+.+-..++ -|-|-+ .+.+ ++...
T Consensus 50 r~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigHI---EMGR-~iTgA 123 (336)
T KOG2708|consen 50 RAWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGHI---EMGR-EITGA 123 (336)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhhh---hhcc-eeccC
Confidence 445677788999999999999998877767776666 3344445544432255566666 576543 2322 23223
Q ss_pred CCCeEEEEEecccc
Q 009935 262 PNSYALVVSMENIT 275 (522)
Q Consensus 262 ~~~~aLVVs~E~~s 275 (522)
.+-.+|-||+-+..
T Consensus 124 ~nPvvLYvSGGNTQ 137 (336)
T KOG2708|consen 124 QNPVVLYVSGGNTQ 137 (336)
T ss_pred CCCEEEEEeCCceE
Confidence 46688888887743
No 244
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=53.48 E-value=34 Score=30.46 Aligned_cols=58 Identities=10% Similarity=0.141 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCC--CCCccHHHHHHHHc-CCCCCeeEEEecC
Q 009935 180 NEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLF--CPTPSLSAMIVNHY-KLRGNITSYNLGG 241 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~--~~~Ps~a~~I~~~L-Gl~~~~~~~dl~g 241 (522)
+|..+-..+-.++.+++.+++++||--++|.+++| ...|+.+ ++++ |+. +++-+...-
T Consensus 16 e~I~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a---~R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 16 EEILEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAA---ARELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHH---HHHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHH---HHccCCCC-ccceeccCc
Confidence 34444445556677888999999999999998775 5567544 3445 776 677776664
No 245
>PLN03170 chalcone synthase; Provisional
Probab=53.12 E-value=48 Score=35.65 Aligned_cols=71 Identities=13% Similarity=0.160 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE-----E-EecCCCchHHHHHHHHH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS-----Y-NLGGMGCSAGLISIDLA 254 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~g~gCsggl~AL~lA 254 (522)
-+.......++++|+++|++++|||..++.-. -+.+-..+.++||++++-.. + +..+|+.++.+.+|+-+
T Consensus 278 ~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 45666677889999999999999998765532 34566788999999754421 2 34555555666666655
Q ss_pred H
Q 009935 255 K 255 (522)
Q Consensus 255 ~ 255 (522)
.
T Consensus 354 ~ 354 (401)
T PLN03170 354 R 354 (401)
T ss_pred H
Confidence 3
No 246
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=51.01 E-value=32 Score=37.07 Aligned_cols=45 Identities=16% Similarity=0.059 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKL 230 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 230 (522)
...|++++|+++|++|+|||.+-.+ |.+..-.+.-+..|.+-||-
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~ 325 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGE 325 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcc
Confidence 3788999999999999999998644 55544455666777777763
No 247
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=50.57 E-value=86 Score=31.12 Aligned_cols=71 Identities=11% Similarity=0.060 Sum_probs=41.9
Q ss_pred ccccccccEEEEcC----CChHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEe
Q 009935 399 PDFKLAFEHFCIHA----GGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAF 474 (522)
Q Consensus 399 ~~~~~did~f~~H~----~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~~Gd~Vlliaf 474 (522)
+...+||+|++.=. ..+.+--.+.+.|||++.-- |.-+.-.|--++.+.+-.-.++.+. .||.+|++++.
T Consensus 116 g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~---~p~a~VLvv~v 189 (226)
T PF00195_consen 116 GLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA---NPGARVLVVCV 189 (226)
T ss_dssp TS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH---STT-EEEEEEE
T ss_pred CCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC---CccceEEEEEE
Confidence 33468999999532 24445567999999998643 5566666766666555333333333 48999999876
Q ss_pred C
Q 009935 475 G 475 (522)
Q Consensus 475 G 475 (522)
=
T Consensus 190 E 190 (226)
T PF00195_consen 190 E 190 (226)
T ss_dssp E
T ss_pred E
Confidence 4
No 248
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=49.78 E-value=27 Score=37.46 Aligned_cols=44 Identities=18% Similarity=0.155 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYK 229 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 229 (522)
..++++++|+++|++|+|||.+... |++..-.+.-+..|.+-||
T Consensus 277 ~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 277 MQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 3689999999999999999999754 5554445566777888887
No 249
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=49.50 E-value=65 Score=34.50 Aligned_cols=41 Identities=15% Similarity=0.106 Sum_probs=29.3
Q ss_pred HHHHHHHHHhcCCC--CCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCC
Q 009935 187 FGAIDELLSKTGVK--AKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRG 232 (522)
Q Consensus 187 ~~Aa~~aL~~agi~--p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~ 232 (522)
..|++++++++|++ ++|||++-++ +. ....-+....||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D~F-----t~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDDRY-----SYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEecCC-----hHHHHHHHHHcCCCC
Confidence 36999999999997 6999999665 32 223345556677653
No 250
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=49.23 E-value=36 Score=36.07 Aligned_cols=45 Identities=13% Similarity=0.167 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcC
Q 009935 185 VMFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYK 229 (522)
Q Consensus 185 l~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 229 (522)
-..+|++++|+++|++++|||.+... +++..-.+.-...|..-|+
T Consensus 280 ~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~ 325 (421)
T cd00833 280 AQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFG 325 (421)
T ss_pred HHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHh
Confidence 34689999999999999999999765 4432222333445555554
No 251
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=48.07 E-value=89 Score=33.84 Aligned_cols=44 Identities=11% Similarity=0.127 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYK 229 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LG 229 (522)
...|++++|+++|++|+|||.+-.. +.+..-.+.-...+..-+|
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 3678999999999999999998654 4433333333444555554
No 252
>PLN03173 chalcone synthase; Provisional
Probab=47.89 E-value=59 Score=34.86 Aligned_cols=72 Identities=11% Similarity=0.150 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE-----E-EecCCCchHHHHHHHH
Q 009935 180 NEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS-----Y-NLGGMGCSAGLISIDL 253 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~g~gCsggl~AL~l 253 (522)
+.+...+-..++++|++.|++++|||..++.-. .+..-..++++||++++-.. + +.+||+.++-+.+|+-
T Consensus 273 ~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqg----g~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~ 348 (391)
T PLN03173 273 GLISKNVEKSLTEAFKPLGISDWNSLFWIAHPG----GPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDE 348 (391)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCeEEECCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 345666777889999999999999999765532 24566789999999855432 2 2333444444455544
Q ss_pred HH
Q 009935 254 AK 255 (522)
Q Consensus 254 A~ 255 (522)
+.
T Consensus 349 ~~ 350 (391)
T PLN03173 349 MR 350 (391)
T ss_pred HH
Confidence 43
No 253
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=47.29 E-value=32 Score=38.26 Aligned_cols=84 Identities=18% Similarity=0.153 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc-----cHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHH
Q 009935 178 ARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP-----SLSAMIVNHYKLRGNITSYNLGGMGCSAGLISID 252 (522)
Q Consensus 178 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-----s~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~ 252 (522)
.+...+.+. .+++++|+++|++++|||.|.++..|+..+. +.|--++..+|. +.+.++.+-|-+.
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~----~~~~v~h~~aH~~----- 114 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDV----PLIGVNHCVAHVE----- 114 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCC----CeecccHHHHHHH-----
Confidence 455666555 9999999999999999999998887764322 123344555554 3555554444332
Q ss_pred HHHHHHHcCC-CCeEEEEEecc
Q 009935 253 LAKQLLQVHP-NSYALVVSMEN 273 (522)
Q Consensus 253 lA~~lL~~~~-~~~aLVVs~E~ 273 (522)
..++.++. ..-+|+|++-.
T Consensus 115 --~a~~~~~~~~~l~l~vsGg~ 134 (535)
T PRK09605 115 --IGRLTTGAEDPVTLYVSGGN 134 (535)
T ss_pred --HhhhccCCCCCeEEEEecCC
Confidence 22232332 23667776664
No 254
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=46.60 E-value=97 Score=33.18 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCC--CCCcCEEEEe-ecCCCCCccHHHHHHHHcCCCC
Q 009935 187 FGAIDELLSKTGVK--AKDIGILVVN-CSLFCPTPSLSAMIVNHYKLRG 232 (522)
Q Consensus 187 ~~Aa~~aL~~agi~--p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl~~ 232 (522)
..|++++++++|++ ++|||++=++ +. ....-+..+.||+.+
T Consensus 269 ~~aa~~a~~~AGl~~~~~Did~~Ei~D~F-----s~~~l~~~e~lGl~~ 312 (398)
T PRK06157 269 RIAARKAYREAGITDPREELSMAEVHDCF-----SITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHcCCCCchhcCCEEEEecCC-----hHHHHHHHHHcCCCC
Confidence 57999999999998 7999998544 32 233455566777754
No 255
>PLN03172 chalcone synthase family protein; Provisional
Probab=46.06 E-value=35 Score=36.55 Aligned_cols=70 Identities=11% Similarity=0.143 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE-----E-EecCCCchHHHHHHHHH
Q 009935 181 EAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS-----Y-NLGGMGCSAGLISIDLA 254 (522)
Q Consensus 181 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~g~gCsggl~AL~lA 254 (522)
.+...+...++++|++.|++..|||..++.-. -+..-..|+++||++++-.. + +.+||+.++.+.+|+.+
T Consensus 274 ~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqg----g~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 274 LISKNIEKSLVEAFAPIGINDWNSIFWIAHPG----GPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHHhhhcCCCccccceEEecCC----cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 34555667778899999999999998765432 24566789999999855432 2 34455556666666644
No 256
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=45.46 E-value=43 Score=36.13 Aligned_cols=45 Identities=13% Similarity=0.023 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKL 230 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 230 (522)
..++++++|+++|++|+|||.+-.. |++..-.+.-+..|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 4789999999999999999999644 55444456667778888874
No 257
>PLN03171 chalcone synthase-like protein; Provisional
Probab=44.11 E-value=68 Score=34.39 Aligned_cols=71 Identities=13% Similarity=0.095 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHh---------cCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeE------EEecCCCc
Q 009935 180 NEAEMVMFGAIDELLSK---------TGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITS------YNLGGMGC 244 (522)
Q Consensus 180 ~ea~~l~~~Aa~~aL~~---------agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~g~gC 244 (522)
++...++.+++++++++ .|++++|||.++ .+. .+.+-..+.++||++++-.. -+..++++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~---Hq~--~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAV---HPG--SSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEE---cCC--cHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 44555666666666665 588899998764 221 23666789999999754322 24555666
Q ss_pred hHHHHHHHHHH
Q 009935 245 SAGLISIDLAK 255 (522)
Q Consensus 245 sggl~AL~lA~ 255 (522)
++-..+|+.+.
T Consensus 350 aSip~~L~~~~ 360 (399)
T PLN03171 350 ATVIFALDELR 360 (399)
T ss_pred hhHHHHHHHHH
Confidence 66667776554
No 258
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=43.41 E-value=2.7e+02 Score=29.80 Aligned_cols=56 Identities=13% Similarity=-0.077 Sum_probs=34.8
Q ss_pred ccccEEEEcCCChHHHHHHHHHcCCCcc------------------cccccccccccccccccchHHHHHHHHHH
Q 009935 403 LAFEHFCIHAGGRAVLDELEKNLELSEW------------------HMEPSRMTLYRFGNTSSSSLWYELAYSEA 459 (522)
Q Consensus 403 ~did~f~~H~~g~~vl~~i~~~Lgl~~e------------------~~~~S~~tl~r~GNtsSasi~~~La~~~~ 459 (522)
+|||.+-+|-.-..+.=...|.||+-+. .+.+|= -+-.+||...++=...+.++..
T Consensus 282 ~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~G-G~la~Ghp~gatG~~~~~e~~~ 355 (392)
T PRK06065 282 KEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSG-GLLGVGNPIAAAGLMKVISIYW 355 (392)
T ss_pred hhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCC-ccccCCCCccHHHHHHHHHHHH
Confidence 6899999999866555555678886543 111100 1223788887777766665544
No 259
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=43.23 E-value=58 Score=34.66 Aligned_cols=87 Identities=21% Similarity=0.273 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCcc--------HHHHHHHHcCCC--CCeeEEEecCCC
Q 009935 174 CMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPS--------LSAMIVNHYKLR--GNITSYNLGGMG 243 (522)
Q Consensus 174 ~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps--------~a~~I~~~LGl~--~~~~~~dl~g~g 243 (522)
.+.+...+...+..+|++++++++|+++++||+|=....+-+..|. -.+.|+++.|++ .|-++-|+.-.|
T Consensus 61 ~l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a~GG 140 (365)
T PRK09585 61 RLAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAAGG 140 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHhcCC
Confidence 5556667788888999999999999999999998655433333332 378888888876 123445555333
Q ss_pred chHHHHHHHHHHHHHHcCC
Q 009935 244 CSAGLISIDLAKQLLQVHP 262 (522)
Q Consensus 244 Csggl~AL~lA~~lL~~~~ 262 (522)
=.+-+..+ ...+|-.++
T Consensus 141 qGAPLvp~--~~~~Lf~~~ 157 (365)
T PRK09585 141 QGAPLVPA--FHQALFGHP 157 (365)
T ss_pred CCCCchHH--HHHHHhcCC
Confidence 33444333 233444444
No 260
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=43.12 E-value=50 Score=34.88 Aligned_cols=53 Identities=9% Similarity=0.145 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc-----cHHHHHHHHcCCCCCeeEEEecC
Q 009935 185 VMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP-----SLSAMIVNHYKLRGNITSYNLGG 241 (522)
Q Consensus 185 l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P-----s~a~~I~~~LGl~~~~~~~dl~g 241 (522)
.....++++|+++|++++|||.|.++..|+..+. +.|--++..++ ++.+.++.
T Consensus 52 ~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~~----~PligV~H 109 (345)
T PTZ00340 52 HILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLWG----KPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHcC----CCEeecch
Confidence 3467889999999999999999998887763211 22333444444 55667763
No 261
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=42.20 E-value=95 Score=33.23 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=28.0
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecCCCCCccHHHHHHHHcCC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSLFCPTPSLSAMIVNHYKL 230 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~~~~~Ps~a~~I~~~LGl 230 (522)
..|++++++++|++|+|||++-+. |- +...-+..+.||+
T Consensus 258 ~~aa~~a~~~AGi~~~did~~elyD~F-----s~~~~~~~E~lGl 297 (388)
T PRK08142 258 AWSGPAAFAEAGVTPADIKYASIYDSF-----TITVLMQLEDLGF 297 (388)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccc-----hHHHHHHHHHcCC
Confidence 679999999999999999987443 32 2223444566666
No 262
>PRK08304 stage V sporulation protein AD; Validated
Probab=42.13 E-value=1.1e+02 Score=32.24 Aligned_cols=88 Identities=19% Similarity=0.196 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCC-----CC--eeEEEec---------CCCchHHH
Q 009935 185 VMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLR-----GN--ITSYNLG---------GMGCSAGL 248 (522)
Q Consensus 185 l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~-----~~--~~~~dl~---------g~gCsggl 248 (522)
-++..+.+=|+++|.+|+|-|+||..-- ...--.+...+..+-|+. .| +.-||.. |-|||+.+
T Consensus 209 Aa~dti~~h~~d~~~~~~~yDli~tGDl-g~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v 287 (337)
T PRK08304 209 AAADTIQQHFKDTGRSPEDYDLIVTGDL-GRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVV 287 (337)
T ss_pred HHHHHHHHHHHHcCCChhhccEEEEcch-HHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHH
Confidence 3466667778899999999999986521 111223344444444542 11 3556633 33677776
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeccc
Q 009935 249 ISIDLAKQLLQVHPNSYALVVSMENI 274 (522)
Q Consensus 249 ~AL~lA~~lL~~~~~~~aLVVs~E~~ 274 (522)
..=.+-+.| +.+..+++|+|++-.+
T Consensus 288 ~~~~~~~~~-~~g~~~rvl~v~tGaL 312 (337)
T PRK08304 288 TYGYLLKEL-QKGKLKRVLVVATGAL 312 (337)
T ss_pred HHHHHHHHH-hcCCceEEEEEEchhh
Confidence 655555444 4567899999987663
No 263
>PRK12404 stage V sporulation protein AD; Provisional
Probab=40.53 E-value=1.3e+02 Score=31.71 Aligned_cols=88 Identities=16% Similarity=0.196 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCC------C--eeEEEe--------cCCCchHHH
Q 009935 185 VMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRG------N--ITSYNL--------GGMGCSAGL 248 (522)
Q Consensus 185 l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~------~--~~~~dl--------~g~gCsggl 248 (522)
-++..+.+=|+++|.+|+|-|+||..-- ...--.+...+..+-|+.- | ..-||- +|-|||+.+
T Consensus 207 AA~dti~~h~~d~~~~~~~yDlI~TGDL-g~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v 285 (334)
T PRK12404 207 AAVDTIEAHLRDRQIDASYYDLIVTGDL-GHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATV 285 (334)
T ss_pred HHHHHHHHHHHHhCCChhhccEEEEcch-HHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHH
Confidence 3466677778899999999999986521 1112233444555545421 1 234443 234677666
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeccc
Q 009935 249 ISIDLAKQLLQVHPNSYALVVSMENI 274 (522)
Q Consensus 249 ~AL~lA~~lL~~~~~~~aLVVs~E~~ 274 (522)
..=.+-+. |+.+..+++|+|++-.+
T Consensus 286 ~~g~~~~~-~~~g~~~rvL~v~TGAL 310 (334)
T PRK12404 286 TYGHLLNR-MKRGELKRILVVATGAL 310 (334)
T ss_pred HHHHHHHH-HhcCCceEEEEEEchhh
Confidence 55555444 44577899999987663
No 264
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=35.68 E-value=34 Score=34.67 Aligned_cols=30 Identities=20% Similarity=0.403 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEe-e
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVN-C 211 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~-~ 211 (522)
.-+|...|++++++++|++|.||+++=.. |
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqvielhdc 300 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIELHDC 300 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEeecc
Confidence 35678899999999999999999988544 5
No 265
>TIGR02435 CobG precorrin-3B synthase. An iron-sulfur protein. An oxygen atom from dioxygen is incorporated into the macrocycle at C-20. In the aerobic cobalamin biosythesis pathway, four enzymes are involved in the conversion of precorrin-3A to precorrin-6A. The first of the four steps is carried out by EC 1.14.13.83, precorrin-3B synthase (CobG), yielding precorrin-3B as the product. This is followed by three methylation reactions, which introduce a methyl group at C-17 (CobJ; EC 2.1.1.131), C-11 (CobM; EC 2.1.1.133) and C-1 (CobF; EC 2.1.1.152) of the macrocycle, giving rise to precorrin-4, precorrin-5 and precorrin-6A, respectively.
Probab=32.89 E-value=2.2e+02 Score=30.33 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=51.4
Q ss_pred ChhhHHHHHHHHHHhCCccEEeecCCccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEE--EEeec--CC-
Q 009935 140 SEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGIL--VVNCS--LF- 214 (522)
Q Consensus 140 ~~e~~~f~~ki~~~sGi~er~~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~L--I~~~s--~~- 214 (522)
+.+.++.+..+.++.|.++-+..+.-...++.-..-. .+++.+.|++.|+..+.-+.. +++|. +.
T Consensus 269 ~~~~l~~la~ia~~~g~~~irlT~~Q~l~i~~i~~~~----------~~~~~~~l~~~gl~~~~~~~~~~v~aC~G~~~C 338 (390)
T TIGR02435 269 TAAQLRGLAQLAQALGDGDLRLTPWRALLVLGLPPER----------ADAAQRALAALGLVTSASDPRARIIACTGAPGC 338 (390)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCcceEEcCCCHHH----------HHHHHHHHHHCCCCcCCCCCeeeEEECCCcccc
Confidence 3333333344667777766655543222222111111 566667777888765443333 45553 22
Q ss_pred ----CCCccHHHHHHHHcCCCCCeeEEEecCCCchHHH
Q 009935 215 ----CPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGL 248 (522)
Q Consensus 215 ----~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl 248 (522)
..+..++..|.+.++.... ..+.++ ||..+-
T Consensus 339 ~~~~~~t~~~a~~l~~~~~~~~~-~~i~vS--GC~n~C 373 (390)
T TIGR02435 339 ASALADTRADAEALAAYCEPTAP-ITVHLS--GCAKGC 373 (390)
T ss_pred ccchhhHHHHHHHHHHHhcccCC-cEEEEe--CCcccc
Confidence 2344668888888875422 567777 787553
No 266
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=31.50 E-value=1.2e+02 Score=31.63 Aligned_cols=69 Identities=17% Similarity=0.210 Sum_probs=41.7
Q ss_pred HHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCC-------eeEEEecCCCchHHHHHHHHHHHHHHc
Q 009935 188 GAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGN-------ITSYNLGGMGCSAGLISIDLAKQLLQV 260 (522)
Q Consensus 188 ~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~-------~~~~dl~g~gCsggl~AL~lA~~lL~~ 260 (522)
-|+..+|+++|+..+|||+.=.|-- .-|-+..-.++||+.++ +.++.-- .||+|.=.-.-+-+.|=+.
T Consensus 324 vAIp~alk~aGL~v~did~FEINEA----FAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHP-lGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 324 VAIPKALKAAGLEVDDIDLFEINEA----FASQALYCRNKLGLDPEKVNVNGGAIALGHP-LGATGARCVATLLHEMKRR 398 (435)
T ss_pred hhhHHHHHHcCCcccccceeehhHH----HHHHHHHHHHHhCCCHHHcCCCCceeeccCC-cCCccHhHHHHHHHHHHhh
Confidence 3788899999999999998755421 12334455688888532 3333333 4677665544444444443
Q ss_pred C
Q 009935 261 H 261 (522)
Q Consensus 261 ~ 261 (522)
+
T Consensus 399 g 399 (435)
T KOG1389|consen 399 G 399 (435)
T ss_pred c
Confidence 3
No 267
>PLN03168 chalcone synthase; Provisional
Probab=30.84 E-value=1.9e+02 Score=30.91 Aligned_cols=78 Identities=19% Similarity=0.086 Sum_probs=44.6
Q ss_pred HHHhhcccccccccccccEEEEcCCC----hHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCC
Q 009935 389 VFKMKIKPYIPDFKLAFEHFCIHAGG----RAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMR 464 (522)
Q Consensus 389 v~~~~~~~~~~~~~~did~f~~H~~g----~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GNtsSasi~~~La~~~~~g~l~ 464 (522)
..+.++++ .+..++||||++..... +..--.+++.||++..-. +.. -.|+++++-.+.|..+..-=+-.
T Consensus 108 Aa~~AL~~-ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~---r~~---d~~~gC~g~~~aL~~A~~~i~~~ 180 (389)
T PLN03168 108 AAQKAIKE-WGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVK---RVM---MYQTGCFGGASVLRVAKDLAENN 180 (389)
T ss_pred HHHHHHHH-cCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcce---eee---eeCCccHHHHHHHHHHHHHHHhC
Confidence 33444443 34456899999876443 334456899999976421 111 24566777777776543311114
Q ss_pred CCCEEEEEE
Q 009935 465 KGDRTWQIA 473 (522)
Q Consensus 465 ~Gd~Vllia 473 (522)
++.+|++++
T Consensus 181 ~~~~VLVV~ 189 (389)
T PLN03168 181 KGARVLAVA 189 (389)
T ss_pred CCCEEEEEE
Confidence 566777655
No 268
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=30.76 E-value=1.1e+02 Score=32.85 Aligned_cols=27 Identities=19% Similarity=0.298 Sum_probs=22.7
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEe-ecC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVN-CSL 213 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~-~s~ 213 (522)
.++++++|+++|++|+|||.+-.. +.+
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~hgtgt 311 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPHGTGS 311 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccCCCC
Confidence 689999999999999999988654 433
No 269
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=30.59 E-value=78 Score=32.89 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=51.0
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCC-------eeEEEec----
Q 009935 172 NPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGN-------ITSYNLG---- 240 (522)
Q Consensus 172 ~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~-------~~~~dl~---- 240 (522)
..+|.+|- ..-++..+.+=|+++|.+|+|-|+||..-- ...--.+...+.++-|+.-. +.-||..
T Consensus 194 ~~nMGaAM---APAA~dTI~~h~~D~g~~p~dYDlIvTGDL-g~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv 269 (329)
T PF07451_consen 194 PNNMGAAM---APAAADTIEQHFKDTGRSPDDYDLIVTGDL-GKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDV 269 (329)
T ss_dssp TT-HHHHH---HHHHHHHHHHHHHHCT--GGG-SEEEESS--HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--
T ss_pred cccchhhH---hHHHHHHHHHHHHHhCCChhhcCeEEecch-HHHHHHHHHHHHHHcCCCCccccccCCeEeecCCcccc
Confidence 45565322 233466667778899999999999986521 01112344555556565311 1123322
Q ss_pred -----CCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccc
Q 009935 241 -----GMGCSAGLISIDLAKQLLQVHPNSYALVVSMENI 274 (522)
Q Consensus 241 -----g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~ 274 (522)
|-|||+.+..=.+-+. |+.+..+++|+|++-.+
T Consensus 270 ~aGGSGcgCSA~V~~g~ll~~-l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 270 HAGGSGCGCSAVVLCGYLLPK-LRKGELKRVLFVATGAL 307 (329)
T ss_dssp TT-EESHHHHHHHHHHCHHHH-HHTTS-SEEEEEEEEE-
T ss_pred ccCCCCcchHHHHHHHHHHHH-HHcCCceEEEEEEchhh
Confidence 3466766655555444 45677899999987653
No 270
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=30.34 E-value=87 Score=33.25 Aligned_cols=59 Identities=17% Similarity=0.231 Sum_probs=45.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCc----------cHHHHHHHHcCCC
Q 009935 173 PCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTP----------SLSAMIVNHYKLR 231 (522)
Q Consensus 173 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~P----------s~a~~I~~~LGl~ 231 (522)
..+++.+++...+-..|+..++++.++.|+||+.|.+...+..+.| ....+|+++.|++
T Consensus 62 ~~~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~ 130 (371)
T COG2377 62 AELAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGIT 130 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCc
Confidence 3456677778888899999999999999999997766533322222 2478899999986
No 271
>PRK13410 molecular chaperone DnaK; Provisional
Probab=28.73 E-value=1.6e+02 Score=33.89 Aligned_cols=69 Identities=13% Similarity=0.109 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLA 254 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA 254 (522)
..+-+...++++|+++|+++++||.|+..... ..+|..-.+|.+.+|... ..+++..-|.+.-.|+..|
T Consensus 307 l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~~---~~~~npdeaVA~GAAi~aa 375 (668)
T PRK13410 307 LLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPREP---NQNVNPDEVVAVGAAIQAG 375 (668)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCCc---ccCCCCchHHHHhHHHHHH
Confidence 34445667889999999999999999866322 258999999999998542 3344444555555555443
No 272
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.01 E-value=69 Score=34.02 Aligned_cols=45 Identities=16% Similarity=0.126 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEE-EeecCCCCCccHHHHHHHHcCC
Q 009935 186 MFGAIDELLSKTGVKAKDIGILV-VNCSLFCPTPSLSAMIVNHYKL 230 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI-~~~s~~~~~Ps~a~~I~~~LGl 230 (522)
+..|.+++|+.+|+.|+|||.|= ++||+..-.-.-+..|.+-|+-
T Consensus 303 a~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 303 AVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred HHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 48899999999999999999985 5566532222334556666654
No 273
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=26.46 E-value=2e+02 Score=30.15 Aligned_cols=88 Identities=16% Similarity=0.191 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCC--C---C--eeEEEe--------cCCCchHHHH
Q 009935 185 VMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLR--G---N--ITSYNL--------GGMGCSAGLI 249 (522)
Q Consensus 185 l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~--~---~--~~~~dl--------~g~gCsggl~ 249 (522)
-++..+.+=|+++|.+|+|-|+||..-- ...--.+...+..+-|+. . | ..-||- +|-|||+.+.
T Consensus 203 aa~dti~~h~~d~~~~~~~yd~i~tgdl-g~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~ 281 (327)
T TIGR02845 203 AAADTIEAHFKDTGRSVDDYDLIVTGDL-ARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVT 281 (327)
T ss_pred HHHHHHHHHHHHcCCChhhccEEEecch-HHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHH
Confidence 3466677778899999999999986521 111223334444444441 0 1 234443 2346776665
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeccc
Q 009935 250 SIDLAKQLLQVHPNSYALVVSMENI 274 (522)
Q Consensus 250 AL~lA~~lL~~~~~~~aLVVs~E~~ 274 (522)
.=.+-+.| +.+..+++|+|++-.+
T Consensus 282 ~~~~~~~~-~~g~~~r~l~v~tgal 305 (327)
T TIGR02845 282 YGHILKEM-LRGKLKKVLVVATGAL 305 (327)
T ss_pred HHHHHHHH-hcCcceEEEEEEchhh
Confidence 55554444 4567899999987663
No 274
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=26.29 E-value=63 Score=31.69 Aligned_cols=38 Identities=29% Similarity=0.349 Sum_probs=28.5
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHhhh
Q 009935 442 FGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCN 481 (522)
Q Consensus 442 ~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~ 481 (522)
+|-|-|. +...+.+.+.=.+++||+|+=||-|+||...
T Consensus 51 ~gqtis~--P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aA 88 (209)
T COG2518 51 CGQTISA--PHMVARMLQLLELKPGDRVLEIGTGSGYQAA 88 (209)
T ss_pred CCceecC--cHHHHHHHHHhCCCCCCeEEEECCCchHHHH
Confidence 5555444 5566666666678999999999999998754
No 275
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=26.10 E-value=2.1e+02 Score=32.57 Aligned_cols=67 Identities=15% Similarity=0.086 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDL 253 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~l 253 (522)
..+=+...++++|+++|++++|||.|+... +. .+|.+..+|.+.+|... . .+++-.-|.+.-.|+..
T Consensus 307 l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~l~~~fg~~~-~--~~~npdeaVA~GAAi~a 374 (616)
T PRK05183 307 LVKRTLLACRRALRDAGVEADEVKEVVMVGGST--RVPLVREAVGEFFGRTP-L--TSIDPDKVVAIGAAIQA 374 (616)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCEEEEECCcc--cChHHHHHHHHHhccCc-C--cCCCchHHHHHHHHHHH
Confidence 333455667899999999999999998763 33 57899999999998652 2 24444345555455443
No 276
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=25.59 E-value=1.6e+02 Score=33.31 Aligned_cols=67 Identities=12% Similarity=0.121 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHH
Q 009935 182 AEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISID 252 (522)
Q Consensus 182 a~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~ 252 (522)
..+-....++++|+++|+++++||.|++.... ..+|.+-..|.+.+|.. + ..+++-.-|.+.-.|+.
T Consensus 303 l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGs-sriP~v~~~i~~~f~~~--~-~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 303 LVERTKEPVRQALKDAGLSASDIDEVILVGGS-TRIPAVQELVKDFFGKE--P-NKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCcEEEEECCc-ccChHHHHHHHHHhCCc--c-cCCcCcHHHHHHHHHHH
Confidence 33445667789999999999999999876321 25899999999999843 2 23444345555555554
No 277
>PRK08329 threonine synthase; Validated
Probab=25.39 E-value=67 Score=33.68 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=29.8
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEEeChhHh
Q 009935 446 SSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFK 479 (522)
Q Consensus 446 sSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~ 479 (522)
+|+..+..+..+.++|.+++|++|+++--|+|+|
T Consensus 312 ssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 312 TSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred cHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 4677788888888899999999999999999986
No 278
>PRK13411 molecular chaperone DnaK; Provisional
Probab=25.34 E-value=1.6e+02 Score=33.76 Aligned_cols=65 Identities=15% Similarity=0.208 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHH
Q 009935 185 VMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDL 253 (522)
Q Consensus 185 l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~l 253 (522)
-+...++++|+++|+++++||.|+... +. .+|.+-.+|.+.+|-. . ...+++..-|.+.-.|+..
T Consensus 309 ~~~~~i~~~L~~a~~~~~~id~ViLvGGss--riP~v~~~l~~~f~~~-~-~~~~~npdeaVA~GAAi~a 374 (653)
T PRK13411 309 ATIEPMQQALKDAGLKPEDIDRVILVGGST--RIPAVQEAIQKFFGGK-Q-PDRSVNPDEAVALGAAIQA 374 (653)
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEECCCC--CcchHHHHHHHHcCCc-C-cCCCCCchHHHHHHHHHHH
Confidence 345677899999999999999888663 33 5799999999999743 1 1223443345544444443
No 279
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=25.24 E-value=1.8e+02 Score=33.43 Aligned_cols=66 Identities=11% Similarity=0.211 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHH
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLA 254 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA 254 (522)
....++++|+++++++++||.|++.... ..+|..-.+|.+.||-.. ...+++..-|.+.-.|+..|
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~aa 380 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGS-TRIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQAA 380 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCC-CCChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhhHH
Confidence 3456889999999999999999876321 258999999999997431 22344444555555555543
No 280
>PF04241 DUF423: Protein of unknown function (DUF423); InterPro: IPR006696 This is a potential integral membrane protein with no known function.
Probab=25.03 E-value=3.9e+02 Score=22.28 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=22.1
Q ss_pred CCccccccchhhhhhhhHHHHHHHHHHHHHHHH
Q 009935 25 LPNFLLSVRLKYVKLGYHYIISNALYLLLVPIL 57 (522)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (522)
|.+-......+....+-+|.+-|.+.++.++++
T Consensus 10 l~~~~~~~~~~~~~tA~~y~~~Halall~~~~~ 42 (89)
T PF04241_consen 10 LKDQLSPEQLEWFQTAVQYQFIHALALLALGLL 42 (89)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333445566788889999998887776643
No 281
>PLN03184 chloroplast Hsp70; Provisional
Probab=23.79 E-value=2.3e+02 Score=32.66 Aligned_cols=66 Identities=11% Similarity=0.054 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHH
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLA 254 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA 254 (522)
+-+...++++|++++++++|||.|+... +. .+|.+-.+|.+.+|... ...++..-|.+.-.|+..|
T Consensus 346 ~r~~~~i~~~L~~a~~~~~dId~ViLvGGss--riP~V~~~i~~~fg~~~---~~~~npdeaVA~GAAi~aa 412 (673)
T PLN03184 346 DRCKTPVENALRDAKLSFKDIDEVILVGGST--RIPAVQELVKKLTGKDP---NVTVNPDEVVALGAAVQAG 412 (673)
T ss_pred HHHHHHHHHHHHHcCCChhHccEEEEECCcc--ccHHHHHHHHHHhCCCc---ccccCcchHHHHHHHHHHH
Confidence 3345567889999999999999998763 32 58999999999998642 3445544555555555443
No 282
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=23.69 E-value=2e+02 Score=27.11 Aligned_cols=65 Identities=15% Similarity=0.135 Sum_probs=39.3
Q ss_pred CCcCEEEE-eecCCCCCc--cHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHHHHHHHcCC---CCeEEEEEecc
Q 009935 202 KDIGILVV-NCSLFCPTP--SLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHP---NSYALVVSMEN 273 (522)
Q Consensus 202 ~dID~LI~-~~s~~~~~P--s~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA~~lL~~~~---~~~aLVVs~E~ 273 (522)
+.|+++++ +.+.....| +-...+...|. .. .... |=.+.-.||..|.++++..+ .++++|+.++.
T Consensus 47 ~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~---~~--~~~~--G~t~l~~aL~~A~~~l~~~~~~~~~~iiil~sd~ 117 (183)
T cd01453 47 SQLGIISIKNGRAEKLTDLTGNPRKHIQALK---TA--RECS--GEPSLQNGLEMALESLKHMPSHGSREVLIIFSSL 117 (183)
T ss_pred ccEEEEEEcCCccEEEECCCCCHHHHHHHhh---cc--cCCC--CchhHHHHHHHHHHHHhcCCccCceEEEEEEcCC
Confidence 56999999 555443333 22234555543 12 1222 44678899999999997532 35678777663
No 283
>PLN02854 3-ketoacyl-CoA synthase
Probab=22.87 E-value=3.7e+02 Score=30.09 Aligned_cols=42 Identities=12% Similarity=0.160 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhcCCCC------CCcCEEEEeecCCCCCccHHHHHHHHcCCC
Q 009935 186 MFGAIDELLSKTGVKA------KDIGILVVNCSLFCPTPSLSAMIVNHYKLR 231 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p------~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~ 231 (522)
+...+++.|.++|+++ +|||..+.... ....-..|+++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqg----gr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAG----GRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECCC----CHHHHHHHHHHcCCC
Confidence 5778899999999997 58998775532 234556789999996
No 284
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=22.80 E-value=2.4e+02 Score=32.52 Aligned_cols=64 Identities=11% Similarity=0.063 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHHHH
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLA 254 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~lA 254 (522)
+...++++|+++|++++|||.||... ++ .+|..-.+|.+.||..+ . .+++-.-|.+.-.|+.-|
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGGss--riP~V~~~l~~~fg~~~-~--~~~nPdeaVA~GAAi~a~ 400 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGGMT--RMPKVVEEVKKFFQKDP-F--RGVNPDEAVALGAATLGG 400 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECCcc--cChHHHHHHHHHhCCCc-c--ccCCCchHHHHhHHHHHH
Confidence 45567889999999999999998663 33 58999999999998642 3 344444566555555443
No 285
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=22.48 E-value=85 Score=32.86 Aligned_cols=83 Identities=16% Similarity=0.082 Sum_probs=55.4
Q ss_pred ccccccccEEEEcCCChHHHHHHHHHcCCCcccccccccccccccc---cccchHHHHHHHHHHcCCCCCCCE-EEEEEe
Q 009935 399 PDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGN---TSSSSLWYELAYSEAKGRMRKGDR-TWQIAF 474 (522)
Q Consensus 399 ~~~~~did~f~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~tl~r~GN---tsSasi~~~La~~~~~g~l~~Gd~-Vlliaf 474 (522)
+...+|+|.|=++-.-.-+.-...|.||++++++.. .----..|| +|.+.+...|.+.+++ +.|.+ |.-+.-
T Consensus 308 G~~~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv-~GGAValGHPlG~SGaRi~~tL~~~L~~---~~g~~GvAaiCn 383 (396)
T KOG1390|consen 308 GLEQSDVDYWEINEAFSVVVLANIKKLGLDPSKVNV-HGGAVALGHPLGMSGARILVTLLHTLEQ---KGGKIGVAAICN 383 (396)
T ss_pred CcchhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccC-CCceeecCCCcCCcchhHHHHHHHHHHh---hCCceeEEEEec
Confidence 334688998888888778888889999999999852 111123555 6778899999998875 22333 344555
Q ss_pred ChhHhhhheeeE
Q 009935 475 GSGFKCNSAVWQ 486 (522)
Q Consensus 475 GsG~~~~s~v~r 486 (522)
|.|.. .+++++
T Consensus 384 GGGga-sa~vie 394 (396)
T KOG1390|consen 384 GGGGA-SAMVIE 394 (396)
T ss_pred CCCce-eeEEEe
Confidence 65543 345554
No 286
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=22.19 E-value=3e+02 Score=31.23 Aligned_cols=64 Identities=13% Similarity=0.114 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEee-cCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHH
Q 009935 184 MVMFGAIDELLSKTGVKAKDIGILVVNC-SLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISID 252 (522)
Q Consensus 184 ~l~~~Aa~~aL~~agi~p~dID~LI~~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~ 252 (522)
+=+...++++|+++|++++|||.|+... +. .+|.+-.+|.+.+|... . .+++-.-|.+.-.|+.
T Consensus 293 ~~i~~~i~~~L~~a~~~~~~id~ViLvGGss--riP~V~~~l~~~f~~~~-~--~~~npdeaVA~GAai~ 357 (599)
T TIGR01991 293 QKTLSICRRALRDAGLSVEEIKGVVLVGGST--RMPLVRRAVAELFGQEP-L--TDIDPDQVVALGAAIQ 357 (599)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEECCcC--CChHHHHHHHHHhCCCC-C--CCCCCcHHHHHHHHHH
Confidence 3455777899999999999999998663 32 57999999999998642 2 2444334444444444
No 287
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=22.08 E-value=2.5e+02 Score=32.03 Aligned_cols=66 Identities=11% Similarity=0.117 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHH
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISID 252 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~ 252 (522)
.+-+...++++|+++|+++++||.|+..... ..+|.+-.+|.+.||... ..+++-.-|.+.-.|+.
T Consensus 306 ~~~~~~~i~~~l~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~fg~~~---~~~~npdeava~GAa~~ 371 (627)
T PRK00290 306 VERTIEPCKQALKDAGLSVSDIDEVILVGGS-TRMPAVQELVKEFFGKEP---NKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHHHcCCChhhCcEEEEECCc-CCChHHHHHHHHHhCCCC---CcCcCChHHHHHhHHHH
Confidence 3345566789999999999999999866321 258999999999998542 23444445665555554
No 288
>CHL00094 dnaK heat shock protein 70
Probab=22.02 E-value=2.3e+02 Score=32.25 Aligned_cols=63 Identities=10% Similarity=0.081 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecCCCchHHHHHHH
Q 009935 186 MFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISID 252 (522)
Q Consensus 186 ~~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~AL~ 252 (522)
+...++++|+++|+++++||.|+..... ...|.+-.+|.+.+|... ..+++..-|.+.-.|+.
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~~---~~~~~pdeava~GAA~~ 373 (621)
T CHL00094 311 CRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKKP---NQSVNPDEVVAIGAAVQ 373 (621)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCCc---CcCCCchhHHHhhhHHH
Confidence 3455789999999999999999876422 368999999999998542 22333333444444443
No 289
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=21.89 E-value=49 Score=40.31 Aligned_cols=125 Identities=20% Similarity=0.224 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcCE----EEEeec-CC-----CCCcc----------HHHHHHHHcCCC--CCeeEEEec
Q 009935 183 EMVMFGAIDELLSKTGVKAKDIGI----LVVNCS-LF-----CPTPS----------LSAMIVNHYKLR--GNITSYNLG 240 (522)
Q Consensus 183 ~~l~~~Aa~~aL~~agi~p~dID~----LI~~~s-~~-----~~~Ps----------~a~~I~~~LGl~--~~~~~~dl~ 240 (522)
..|..++.-+|+-++||+|.+... +.+.|| +. ...|. .-+|.+||+-.. =.-++|.+.
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~D 167 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVD 167 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhh
Confidence 456788999999999999987532 333332 11 11221 246667765421 124567777
Q ss_pred CCCchHHHHHHHHHHHHHHcCCCCeEEEEEeccccc-----cccc-------CCCcc--ccccccccccceEEEEEecCC
Q 009935 241 GMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITL-----NWYF-------GNDRS--MLVSNCLFRMGGAAILLSNRS 306 (522)
Q Consensus 241 g~gCsggl~AL~lA~~lL~~~~~~~aLVVs~E~~s~-----~~~~-------~~dr~--~l~~~~lfgDGAAAvLLs~~~ 306 (522)
.+|++.+.||+.|.+-++.+..++|+|-+.-.+-. .|.+ +.-+. .--...--.||.+|++|.++.
T Consensus 168 -tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk~ 246 (2376)
T KOG1202|consen 168 -TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRKS 246 (2376)
T ss_pred -hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEehhH
Confidence 59999999999999999999999999887765432 1111 11010 000123456999999998876
Q ss_pred Cc
Q 009935 307 SD 308 (522)
Q Consensus 307 ~~ 308 (522)
..
T Consensus 247 ~A 248 (2376)
T KOG1202|consen 247 LA 248 (2376)
T ss_pred HH
Confidence 53
No 290
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=21.79 E-value=87 Score=27.94 Aligned_cols=52 Identities=19% Similarity=0.303 Sum_probs=34.2
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEE-eChhHhhhheeeEEeccCC--CCC---CCCCccccccc
Q 009935 448 SSLWYELAYSEAKGRMRKGDRTWQIA-FGSGFKCNSAVWQALRTIN--PAK---EKNPWIEEIHE 506 (522)
Q Consensus 448 asi~~~La~~~~~g~l~~Gd~Vllia-fGsG~~~~s~v~r~~~~~~--~~~---~~~~w~~~~~~ 506 (522)
|.++++=+++.+-| ++.||+|.+-+ || .+|+++-.+-. +.- -.+||++++-.
T Consensus 31 a~~~inp~D~~~Lg-v~EGD~VkVkse~G------eVVV~Ak~~~~~~pG~vfiPmgpWaN~vi~ 88 (128)
T COG1153 31 AVCEINPEDMKQLG-VSEGDKVKVKSEFG------EVVVKAKEADGVQPGMVFIPMGPWANVVID 88 (128)
T ss_pred eEEEECHHHHHHhC-CCcCCeEEEEecCc------cEEEEEeeCCCCCCCeEEecCCcccceeeC
Confidence 44555656666554 68999999987 87 57777765432 210 05899998743
No 291
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=21.23 E-value=2.8e+02 Score=29.32 Aligned_cols=73 Identities=18% Similarity=0.231 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-CCCCcCEEEEeecCCCCCccHHHHHHHHc--CCCCCeeEEEecCCCchHHHHHHHHHH
Q 009935 179 RNEAEMVMFGAIDELLSKTGV-KAKDIGILVVNCSLFCPTPSLSAMIVNHY--KLRGNITSYNLGGMGCSAGLISIDLAK 255 (522)
Q Consensus 179 ~~ea~~l~~~Aa~~aL~~agi-~p~dID~LI~~~s~~~~~Ps~a~~I~~~L--Gl~~~~~~~dl~g~gCsggl~AL~lA~ 255 (522)
|....+...+|++++++++|| +|.|+-.|-+=|- .++. ..|.... |-+ -+..--...|+-|-+..||-+|-
T Consensus 127 r~aqV~~vA~aV~~aM~~AGI~dpaDVH~VQvKcP----LLT~-~~i~~A~~RG~~-~~t~dt~~SM~~SrgASALGvAv 200 (365)
T PF09663_consen 127 RMAQVEEVAAAVRAAMADAGITDPADVHFVQVKCP----LLTS-ERIADAKARGKT-VATEDTYESMAYSRGASALGVAV 200 (365)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCChhheeeEEecCC----cCCH-HHHHHHHhCCCc-eeecccccccccccchhHHHHHH
Confidence 344556678999999999999 8999877765552 2222 3333322 322 11112223345555555666666
Q ss_pred HH
Q 009935 256 QL 257 (522)
Q Consensus 256 ~l 257 (522)
.|
T Consensus 201 AL 202 (365)
T PF09663_consen 201 AL 202 (365)
T ss_pred Hh
Confidence 54
No 292
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=20.98 E-value=97 Score=31.43 Aligned_cols=49 Identities=33% Similarity=0.478 Sum_probs=34.9
Q ss_pred HHHHHHHHHhcCCCCCCcCEEEEeecCCCCCccHHHHHHHHcCCCCCeeEEEecC
Q 009935 187 FGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGG 241 (522)
Q Consensus 187 ~~Aa~~aL~~agi~p~dID~LI~~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 241 (522)
+.|++..|+++|++.+|||++=+|-. ..|. .-.+++.|++. +.-.|++|
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEA---FApQ-~LAv~r~L~ld--~sKlNVNG 344 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEA---FAPQ-YLAVERSLDLD--ISKLNVNG 344 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechh---hchH-HHHHHHhhCCC--hhhccccC
Confidence 56888999999999999998877742 1221 23467788874 66677776
No 293
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=20.62 E-value=98 Score=32.04 Aligned_cols=39 Identities=26% Similarity=0.312 Sum_probs=32.9
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEee
Q 009935 173 PCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNC 211 (522)
Q Consensus 173 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~ 211 (522)
.....-+|+|..-..+|+++++.++|.+|++|+.....-
T Consensus 38 N~~~~~~e~A~~ni~~ai~~A~~~aG~~~~~i~~~~agl 76 (301)
T COG2971 38 NIQLVGKEEAVRNIKDAIREALDEAGLKPDEIAAIVAGL 76 (301)
T ss_pred eecccchHHHHHHHHHHHHHHHHhcCCCHHHhCceeeee
Confidence 333345688999999999999999999999999987664
No 294
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=20.11 E-value=1.5e+02 Score=31.14 Aligned_cols=33 Identities=18% Similarity=0.403 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-CCCCcCEEEEee
Q 009935 179 RNEAEMVMFGAIDELLSKTGV-KAKDIGILVVNC 211 (522)
Q Consensus 179 ~~ea~~l~~~Aa~~aL~~agi-~p~dID~LI~~~ 211 (522)
|....+....|++++++++|| +|.|+-.|-+=|
T Consensus 128 r~aqV~~vA~aV~~AM~~AGI~dpaDVH~VQvKc 161 (366)
T TIGR02714 128 RTAQITETAAAVKRAMRDAGIADPADVHFVQVKC 161 (366)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCChhHeeEEEecC
Confidence 445667789999999999999 788887765555
No 295
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=20.04 E-value=2e+02 Score=30.67 Aligned_cols=43 Identities=19% Similarity=0.302 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEeec--CCCCCcc
Q 009935 177 EARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCS--LFCPTPS 219 (522)
Q Consensus 177 ~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~~s--~~~~~Ps 219 (522)
..||...+|......+++++++++.+|+|.|+-.|. -....|.
T Consensus 60 LtresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTGV~Agf~spe 104 (445)
T TIGR03285 60 LTRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTGVTAGFASPE 104 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCChhhccEEEeccceeeccCCHH
Confidence 356778889999999999999999999999986652 2344453
Done!