Query 009940
Match_columns 522
No_of_seqs 479 out of 2991
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 16:20:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009940.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009940hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zo4_A Metallo-beta-lactamase 100.0 3.4E-38 1.2E-42 320.8 30.0 258 184-460 1-306 (317)
2 4ad9_A Lactb2, beta-lactamase- 100.0 1.6E-37 5.5E-42 312.3 30.3 270 181-469 6-286 (289)
3 2vw8_A PA1000, PQSE; quinolone 100.0 1.4E-30 4.7E-35 263.4 23.3 251 182-459 7-300 (303)
4 2cfu_A SDSA1; SDS-hydrolase, l 100.0 1.4E-30 4.8E-35 289.7 23.4 337 119-518 54-457 (658)
5 2yhe_A SEC-alkyl sulfatase; hy 99.9 2E-32 6.8E-37 303.5 0.0 337 119-518 65-469 (668)
6 1m2x_A Class B carbapenemase B 100.0 5.3E-29 1.8E-33 240.6 20.5 204 182-403 2-210 (223)
7 4eyb_A Beta-lactamase NDM-1; m 100.0 3.8E-29 1.3E-33 249.4 17.0 195 181-392 48-255 (270)
8 3l6n_A Metallo-beta-lactamase; 100.0 1.4E-28 4.8E-33 236.4 19.8 197 180-392 3-205 (219)
9 1a7t_A Metallo-beta-lactamase; 100.0 2.5E-28 8.6E-33 237.4 19.9 197 180-392 9-211 (232)
10 3hnn_A Putative diflavin flavo 100.0 4.1E-28 1.4E-32 240.7 20.1 222 176-405 3-250 (262)
11 1k07_A FEZ-1 beta-lactamase; m 100.0 8.6E-28 3E-32 237.9 20.3 217 179-419 5-260 (263)
12 1mqo_A Beta-lactamase II; alph 100.0 1.2E-27 4.2E-32 231.6 19.1 198 179-393 13-216 (227)
13 2fhx_A SPM-1; metallo-beta-lac 100.0 2.7E-27 9.4E-32 231.5 21.8 202 180-406 8-238 (246)
14 2y8b_A Metallo-B-lactamase; hy 100.0 1.4E-27 4.8E-32 237.3 18.1 195 180-392 41-244 (265)
15 3iog_A Beta-lactamase; hydrola 100.0 3.3E-27 1.1E-31 227.7 20.1 187 181-394 2-211 (227)
16 3q6v_A Beta-lactamase; metallo 99.9 3.7E-27 1.3E-31 228.2 18.7 187 181-394 5-218 (233)
17 4hl2_A Beta-lactamase NDM-1; s 99.9 2.1E-27 7E-32 232.4 16.4 196 180-392 20-228 (243)
18 1jjt_A IMP-1 metallo beta-lact 99.9 6.4E-27 2.2E-31 227.0 17.4 194 180-393 5-203 (228)
19 2qed_A Hydroxyacylglutathione 99.9 3.1E-26 1.1E-30 227.0 16.3 175 230-420 29-207 (258)
20 1xm8_A Glyoxalase II; structur 99.9 3.1E-26 1E-30 226.5 16.2 151 230-393 23-175 (254)
21 3m8t_A 'BLR6230 protein; subcl 99.9 9.9E-26 3.4E-30 226.0 20.0 190 181-394 37-249 (294)
22 2p18_A Glyoxalase II; metallop 99.9 1.7E-25 6E-30 227.5 19.0 179 230-421 51-267 (311)
23 4dik_A Flavoprotein; TM0755, e 99.9 4.8E-25 1.7E-29 232.0 19.8 217 177-404 12-258 (410)
24 2ohh_A Type A flavoprotein FPR 99.9 4.4E-25 1.5E-29 231.5 19.2 215 182-405 3-251 (404)
25 1qh5_A Glyoxalase II, protein 99.9 2.4E-25 8.3E-30 220.8 15.3 148 230-392 23-178 (260)
26 4ax1_B Metallo-beta-lactamase 99.9 2.3E-24 7.8E-29 216.7 22.1 187 230-418 67-294 (303)
27 2p97_A Hypothetical protein; p 99.9 1.2E-24 4.1E-29 207.1 18.6 190 184-403 2-198 (201)
28 1ycg_A Nitric oxide reductase; 99.9 1.6E-24 5.6E-29 226.7 21.5 216 184-407 3-248 (398)
29 2q9u_A A-type flavoprotein; fl 99.9 1.3E-24 4.5E-29 229.0 19.8 216 182-406 8-251 (414)
30 1e5d_A Rubredoxin\:oxygen oxid 99.9 2.6E-24 8.8E-29 225.5 20.1 214 183-404 2-246 (402)
31 2gcu_A Putative hydroxyacylglu 99.9 2E-24 6.7E-29 212.4 17.7 150 230-390 28-186 (245)
32 2xf4_A Hydroxyacylglutathione 99.9 1.5E-24 5E-29 207.1 15.5 158 230-392 24-197 (210)
33 4efz_A Metallo-beta-lactamase 99.9 4E-24 1.4E-28 216.0 18.9 159 230-390 28-219 (298)
34 2zwr_A Metallo-beta-lactamase 99.9 3.3E-24 1.1E-28 204.7 15.6 154 230-392 22-189 (207)
35 1sml_A Protein (penicillinase) 99.9 1.1E-23 3.7E-28 209.1 19.0 187 182-392 21-230 (269)
36 3r2u_A Metallo-beta-lactamase 99.9 4.8E-23 1.6E-27 220.8 20.5 156 230-389 48-221 (466)
37 3adr_A Putative uncharacterize 99.9 1.1E-22 3.8E-27 200.3 18.0 155 230-392 29-212 (261)
38 3tp9_A Beta-lactamase and rhod 99.9 9.9E-23 3.4E-27 218.7 15.1 156 230-389 27-201 (474)
39 3dha_A N-acyl homoserine lacto 99.9 3.2E-22 1.1E-26 196.5 10.4 156 230-391 48-243 (254)
40 3aj3_A MLR6805 protein, 4-pyri 99.8 1.7E-21 5.8E-26 193.5 9.3 155 230-391 44-256 (274)
41 3esh_A Protein similar to meta 99.8 2.8E-21 9.6E-26 193.0 9.4 159 230-391 57-255 (280)
42 1p9e_A Methyl parathion hydrol 99.8 3.4E-21 1.1E-25 197.5 7.7 165 223-390 97-305 (331)
43 2r2d_A AGR_PTI_140P, Zn-depend 99.8 3.1E-20 1.1E-24 184.4 11.8 156 230-390 52-262 (276)
44 1ztc_A Hypothetical protein TM 99.8 6.2E-21 2.1E-25 184.1 5.2 147 230-392 44-216 (221)
45 3qsj_A Nudix hydrolase; struct 99.7 3.7E-18 1.3E-22 165.8 5.6 145 8-166 14-204 (232)
46 1zkp_A Hypothetical protein BA 99.6 2.8E-15 9.6E-20 148.2 13.3 167 223-393 43-241 (268)
47 3zq4_A Ribonuclease J 1, RNAse 99.6 7.6E-15 2.6E-19 160.1 13.1 123 229-352 30-169 (555)
48 3bk2_A RNAse J, metal dependen 99.5 3.5E-14 1.2E-18 155.3 13.6 124 229-352 38-184 (562)
49 3iek_A Ribonuclease TTHA0252; 99.5 2.5E-13 8.7E-18 143.8 15.3 159 229-388 22-224 (431)
50 2ycb_A Beta-CAsp RNAse, cleava 99.5 5.8E-13 2E-17 147.7 16.7 165 223-388 193-417 (636)
51 2i7x_A Protein CFT2; polyadeny 99.4 2.5E-12 8.4E-17 144.0 19.0 127 222-349 14-181 (717)
52 2xr1_A Cleavage and polyadenyl 99.4 2.7E-13 9.4E-18 150.3 11.1 158 230-388 206-420 (640)
53 2e7y_A TRNAse Z; tRNA maturati 99.4 2.9E-13 9.9E-18 134.0 7.7 110 222-338 11-146 (280)
54 3g1p_A Protein PHNP; C-P lyase 99.4 4.5E-13 1.6E-17 131.9 8.6 112 230-349 48-166 (258)
55 3md7_A Beta-lactamase-like; ss 99.4 4.4E-12 1.5E-16 127.2 15.8 153 231-392 78-267 (293)
56 3af5_A Putative uncharacterize 99.3 2.5E-12 8.4E-17 143.0 12.1 120 229-349 210-369 (651)
57 2az4_A Hypothetical protein EF 99.3 5.9E-12 2E-16 133.0 14.0 93 255-351 83-193 (429)
58 3kl7_A Putative metal-dependen 99.3 2.8E-11 9.5E-16 117.7 16.4 144 230-390 46-212 (235)
59 2cbn_A Ribonuclease Z; phospho 99.3 9.9E-12 3.4E-16 124.8 12.3 106 230-338 33-152 (306)
60 2wyl_A L-ascorbate-6-phosphate 99.3 8.3E-12 2.8E-16 129.0 10.4 138 254-391 107-285 (360)
61 1y44_A Ribonuclease Z; zinc-de 99.3 1.1E-11 3.7E-16 125.6 10.3 106 230-338 31-150 (320)
62 2i7t_A Cleavage and polyadenyl 99.3 2.7E-12 9.4E-17 136.9 6.2 127 223-350 25-182 (459)
63 3bv6_A Metal-dependent hydrola 99.2 2.6E-11 9E-16 126.2 11.4 138 254-391 131-310 (379)
64 2bib_A CBPE, teichoic acid pho 99.2 1.4E-10 4.7E-15 126.4 14.0 120 230-349 27-205 (547)
65 2p4z_A Metal-dependent hydrola 99.2 1.7E-10 5.9E-15 115.2 12.7 169 221-391 31-259 (284)
66 3rpc_A Possible metal-dependen 99.1 1E-09 3.5E-14 108.2 15.2 128 256-391 64-230 (264)
67 4b87_A DNA cross-LINK repair 1 99.1 1.1E-10 3.6E-15 121.0 8.2 107 229-351 35-146 (367)
68 3zwf_A Zinc phosphodiesterase 99.1 3E-10 1E-14 117.8 10.9 65 230-296 28-102 (368)
69 3jxp_A Coenzyme PQQ synthesis 99.0 4.7E-10 1.6E-14 114.1 9.5 115 232-349 53-203 (321)
70 3zdk_A 5' exonuclease apollo; 98.9 1.8E-09 6.1E-14 110.5 8.4 107 228-350 7-124 (336)
71 3h3e_A Uncharacterized protein 98.8 2.2E-08 7.6E-13 98.9 12.1 66 220-293 29-94 (267)
72 1vjn_A Zn-dependent hydrolase 98.7 4.5E-08 1.6E-12 94.0 9.8 127 230-391 29-177 (220)
73 3u53_A BIS(5'-nucleosyl)-tetra 97.9 1E-05 3.5E-10 72.6 6.4 101 14-149 21-127 (155)
74 3gwy_A Putative CTP pyrophosph 97.8 2E-05 6.7E-10 69.2 6.2 104 6-146 9-115 (140)
75 3grn_A MUTT related protein; s 97.8 4.4E-05 1.5E-09 68.0 7.7 105 6-146 11-118 (153)
76 3i7u_A AP4A hydrolase; nudix p 97.8 1.2E-05 4E-10 70.7 3.2 94 18-148 16-113 (134)
77 1q27_A Putative nudix hydrolas 97.7 0.00011 3.9E-09 66.6 8.7 113 7-154 38-155 (171)
78 1ktg_A Diadenosine tetraphosph 97.7 3.2E-05 1.1E-09 67.4 4.5 108 6-148 6-119 (138)
79 1sjy_A MUTT/nudix family prote 97.6 0.00013 4.3E-09 65.1 7.9 109 7-150 17-133 (159)
80 1v8y_A ADP-ribose pyrophosphat 97.6 7.1E-05 2.4E-09 68.0 6.4 105 7-150 38-147 (170)
81 3q91_A Uridine diphosphate glu 97.6 1.2E-05 4.2E-10 76.9 0.9 124 6-152 39-193 (218)
82 4dyw_A MUTT/nudix family prote 97.5 4.6E-05 1.6E-09 68.4 3.3 103 6-145 32-139 (157)
83 1rya_A GDP-mannose mannosyl hy 97.5 0.00016 5.4E-09 64.5 6.8 108 6-146 21-137 (160)
84 3shd_A Phosphatase NUDJ; nudix 97.5 0.00013 4.3E-09 64.8 5.9 99 7-144 9-112 (153)
85 3exq_A Nudix family hydrolase; 97.5 0.00015 5.2E-09 65.2 6.2 104 7-145 14-119 (161)
86 1vcd_A NDX1; nudix protein, di 97.4 0.00027 9.1E-09 60.3 6.6 99 7-147 6-107 (126)
87 3eds_A MUTT/nudix family prote 97.4 7.7E-05 2.6E-09 66.6 3.2 101 7-146 25-134 (153)
88 1mut_A MUTT, nucleoside tripho 97.3 0.00012 4.2E-09 62.6 4.0 93 18-145 17-111 (129)
89 2pbt_A AP4A hydrolase; nudix p 97.3 0.00011 3.6E-09 63.5 3.4 102 6-147 7-112 (134)
90 2b0v_A Nudix hydrolase; struct 97.3 0.00017 5.7E-09 63.9 4.8 97 17-147 19-120 (153)
91 3o6z_A GDP-mannose pyrophospha 97.3 0.00019 6.4E-09 66.9 5.3 114 6-150 48-169 (191)
92 3son_A Hypothetical nudix hydr 97.3 0.00035 1.2E-08 61.7 6.6 94 16-147 19-124 (149)
93 1nqz_A COA pyrophosphatase (MU 97.3 0.00022 7.4E-09 66.2 5.1 100 12-146 43-150 (194)
94 2w4e_A MUTT/nudix family prote 97.3 0.00024 8.1E-09 62.8 5.1 107 7-150 9-120 (145)
95 3h95_A Nucleoside diphosphate- 97.3 0.00032 1.1E-08 65.6 6.1 104 8-147 31-140 (199)
96 2o1c_A DATP pyrophosphohydrola 97.2 0.0003 1E-08 61.7 5.5 107 6-147 12-132 (150)
97 3q93_A 7,8-dihydro-8-oxoguanin 97.2 0.00016 5.3E-09 66.4 3.6 95 18-146 37-133 (176)
98 3hhj_A Mutator MUTT protein; n 97.2 0.0004 1.4E-08 62.0 6.2 105 7-146 33-139 (158)
99 1hzt_A Isopentenyl diphosphate 97.2 0.00032 1.1E-08 64.9 5.6 114 7-151 36-154 (190)
100 3ees_A Probable pyrophosphohyd 97.2 0.00026 9E-09 62.4 4.7 95 17-146 33-129 (153)
101 2azw_A MUTT/nudix family prote 97.2 0.00025 8.7E-09 62.2 4.5 103 8-147 23-130 (148)
102 3r03_A Nudix hydrolase; struct 97.2 0.00032 1.1E-08 61.3 5.0 105 7-146 12-118 (144)
103 1f3y_A Diadenosine 5',5'''-P1, 97.2 0.00021 7.1E-09 63.9 3.8 98 18-151 27-149 (165)
104 1g0s_A Hypothetical 23.7 kDa p 97.1 0.00043 1.5E-08 65.4 5.2 113 7-150 61-182 (209)
105 3id9_A MUTT/nudix family prote 97.1 0.00031 1.1E-08 63.6 3.9 100 6-146 26-134 (171)
106 3cng_A Nudix hydrolase; struct 97.1 0.00031 1.1E-08 65.1 3.9 99 6-145 43-144 (189)
107 2yvp_A NDX2, MUTT/nudix family 97.0 0.00042 1.4E-08 63.5 4.5 107 8-151 46-158 (182)
108 3oga_A Nucleoside triphosphata 97.0 0.0004 1.4E-08 62.5 4.0 98 18-146 40-148 (165)
109 3gg6_A Nudix motif 18, nucleos 97.0 0.00045 1.6E-08 61.4 4.1 99 6-145 23-128 (156)
110 2fkb_A Putative nudix hydrolas 96.9 0.0012 4.1E-08 60.2 6.6 107 7-149 41-151 (180)
111 2rrk_A ORF135, CTP pyrophospho 96.9 0.00079 2.7E-08 58.4 4.8 94 18-146 21-116 (140)
112 2jvb_A Protein PSU1, mRNA-deca 96.9 0.00063 2.2E-08 59.7 4.2 103 7-149 8-116 (146)
113 2dsc_A ADP-sugar pyrophosphata 96.9 0.00063 2.2E-08 64.3 4.5 109 9-152 69-188 (212)
114 2fml_A MUTT/nudix family prote 96.8 0.00092 3.2E-08 65.9 5.2 98 16-145 55-155 (273)
115 1mk1_A ADPR pyrophosphatase; n 96.8 0.00099 3.4E-08 62.7 4.6 101 17-151 55-162 (207)
116 2pqv_A MUTT/nudix family prote 96.8 0.0004 1.4E-08 61.6 1.8 99 7-146 23-128 (154)
117 1x51_A A/G-specific adenine DN 96.7 0.0025 8.5E-08 56.6 6.8 104 8-146 24-132 (155)
118 2fvv_A Diphosphoinositol polyp 96.7 0.00091 3.1E-08 62.4 4.1 100 9-149 47-152 (194)
119 2b06_A MUTT/nudix family prote 96.7 0.00083 2.8E-08 59.5 3.0 103 8-146 13-118 (155)
120 2yyh_A MUTT domain, 8-OXO-DGTP 96.6 0.0015 5.2E-08 56.7 4.3 90 19-145 27-119 (139)
121 3fcm_A Hydrolase, nudix family 96.6 0.0013 4.5E-08 61.1 4.2 104 7-148 49-168 (197)
122 2a6t_A SPAC19A8.12; alpha/beta 96.6 0.00088 3E-08 66.0 2.9 102 6-147 104-212 (271)
123 3f6a_A Hydrolase, nudix family 96.5 0.0015 5.3E-08 58.2 3.9 103 7-146 10-132 (159)
124 3i9x_A MUTT/nudix family prote 96.5 0.0018 6E-08 59.7 4.3 104 16-146 45-154 (187)
125 3fjy_A Probable MUTT1 protein; 96.5 0.0022 7.5E-08 65.7 5.2 99 15-148 36-159 (364)
126 1vhz_A ADP compounds hydrolase 96.5 0.00099 3.4E-08 62.3 2.4 97 18-149 61-162 (198)
127 3gz5_A MUTT/nudix family prote 96.5 0.0021 7E-08 62.1 4.6 98 16-145 36-137 (240)
128 3fk9_A Mutator MUTT protein; s 96.4 0.0008 2.7E-08 62.4 1.0 92 18-145 16-112 (188)
129 2qjt_B Nicotinamide-nucleotide 96.3 0.0041 1.4E-07 63.1 6.0 98 17-146 219-328 (352)
130 2qjo_A Bifunctional NMN adenyl 96.3 0.0052 1.8E-07 61.9 6.7 98 17-146 214-321 (341)
131 2kdv_A RNA pyrophosphohydrolas 96.3 0.0014 4.8E-08 59.2 2.1 108 7-150 12-138 (164)
132 3o8s_A Nudix hydrolase, ADP-ri 96.2 0.0016 5.5E-08 61.2 2.0 92 18-144 82-176 (206)
133 3q1p_A Phosphohydrolase (MUTT/ 96.1 0.0019 6.5E-08 60.6 2.2 93 18-144 80-175 (205)
134 2fb1_A Conserved hypothetical 96.1 0.0017 5.8E-08 62.1 1.7 94 16-144 27-125 (226)
135 1k2e_A Nudix homolog; nudix/MU 95.9 0.0033 1.1E-07 55.9 2.7 96 8-146 6-118 (156)
136 3fsp_A A/G-specific adenine gl 95.7 0.0083 2.8E-07 61.7 5.0 99 6-144 243-342 (369)
137 1q33_A Pyrophosphatase, ADP-ri 95.6 0.0062 2.1E-07 60.6 3.5 98 14-145 136-260 (292)
138 1vk6_A NADH pyrophosphatase; 1 95.5 0.0064 2.2E-07 59.8 3.2 89 17-144 151-243 (269)
139 3e57_A Uncharacterized protein 95.4 0.0067 2.3E-07 57.4 2.9 109 17-151 79-192 (211)
140 3f13_A Putative nudix hydrolas 94.6 0.046 1.6E-06 49.1 5.9 79 18-140 28-108 (163)
141 2pny_A Isopentenyl-diphosphate 93.8 0.14 4.9E-06 49.3 7.9 117 9-151 76-205 (246)
142 1u20_A U8 snoRNA-binding prote 93.2 0.05 1.7E-06 51.1 3.5 91 17-145 56-163 (212)
143 2dho_A Isopentenyl-diphosphate 93.1 0.18 6.1E-06 48.3 7.2 117 9-151 65-194 (235)
144 3dup_A MUTT/nudix family prote 89.9 0.29 9.8E-06 48.6 5.0 107 11-150 128-245 (300)
145 2xsq_A U8 snoRNA-decapping enz 89.2 0.34 1.2E-05 45.7 4.7 80 43-143 76-169 (217)
146 2jt1_A PEFI protein; solution 84.1 0.87 3E-05 35.6 3.7 46 408-462 5-57 (77)
147 1oyi_A Double-stranded RNA-bin 74.9 2.1 7.1E-05 33.9 3.1 57 408-473 18-75 (82)
148 2fu4_A Ferric uptake regulatio 70.5 6 0.00021 30.4 5.0 52 409-464 19-73 (83)
149 1qbj_A Protein (double-strande 67.3 6.1 0.00021 31.0 4.3 57 407-472 10-71 (81)
150 1xmk_A Double-stranded RNA-spe 66.0 9.2 0.00031 29.9 5.0 47 407-462 11-59 (79)
151 3pqk_A Biofilm growth-associat 65.2 20 0.00069 28.5 7.4 44 411-463 27-70 (102)
152 1xn7_A Hypothetical protein YH 63.5 6.6 0.00022 30.6 3.8 45 409-462 4-49 (78)
153 2k02_A Ferrous iron transport 58.8 6.6 0.00023 31.3 3.1 45 410-463 5-50 (87)
154 3jth_A Transcription activator 58.5 8.6 0.00029 30.5 3.8 45 411-464 27-71 (98)
155 1qgp_A Protein (double strande 55.9 8.9 0.0003 29.6 3.3 47 408-463 15-65 (77)
156 2heo_A Z-DNA binding protein 1 55.0 12 0.00041 27.8 3.9 44 409-461 12-57 (67)
157 1y0u_A Arsenical resistance op 52.4 19 0.00064 28.4 4.9 44 410-463 34-77 (96)
158 1p6r_A Penicillinase repressor 52.2 14 0.00047 28.3 3.9 51 410-465 12-63 (82)
159 2kko_A Possible transcriptiona 50.4 19 0.00064 29.3 4.7 44 411-463 29-72 (108)
160 2vxz_A Pyrsv_GP04; viral prote 49.6 20 0.00068 31.4 4.8 50 404-462 8-57 (165)
161 2k4b_A Transcriptional regulat 49.2 9.9 0.00034 30.9 2.7 53 411-468 39-92 (99)
162 3f6o_A Probable transcriptiona 47.9 14 0.00048 30.5 3.6 45 411-464 22-66 (118)
163 2oqg_A Possible transcriptiona 47.1 28 0.00097 27.9 5.4 46 410-464 24-69 (114)
164 2htj_A P fimbrial regulatory p 46.3 20 0.00069 27.3 4.0 43 411-462 4-47 (81)
165 3b73_A PHIH1 repressor-like pr 44.7 15 0.00051 30.5 3.2 46 410-462 16-62 (111)
166 1r1u_A CZRA, repressor protein 44.5 32 0.0011 27.6 5.2 44 411-463 30-73 (106)
167 1mzb_A Ferric uptake regulatio 44.4 22 0.00076 30.2 4.4 48 411-462 22-72 (136)
168 3rh7_A Hypothetical oxidoreduc 43.6 24 0.00084 34.9 5.1 55 79-143 217-272 (321)
169 2o03_A Probable zinc uptake re 41.2 37 0.0013 28.6 5.3 48 411-462 15-64 (131)
170 2fe3_A Peroxide operon regulat 40.2 35 0.0012 29.3 5.1 49 411-463 26-76 (145)
171 1r1t_A Transcriptional repress 39.4 40 0.0014 28.0 5.2 44 411-463 50-93 (122)
172 3hhh_A Transcriptional regulat 38.9 31 0.001 28.6 4.3 50 411-463 17-66 (116)
173 2jsc_A Transcriptional regulat 38.6 22 0.00075 29.3 3.4 45 411-464 25-69 (118)
174 3f6v_A Possible transcriptiona 37.7 25 0.00084 30.7 3.7 44 411-463 62-105 (151)
175 3mwm_A ZUR, putative metal upt 37.5 29 0.001 29.7 4.1 50 410-463 17-68 (139)
176 1uly_A Hypothetical protein PH 36.9 37 0.0013 30.8 4.9 46 408-462 21-66 (192)
177 4esb_A Transcriptional regulat 36.6 27 0.00091 28.9 3.5 50 411-463 13-62 (115)
178 3f8b_A Transcriptional regulat 36.1 29 0.001 28.7 3.7 52 411-463 16-67 (116)
179 3g2b_A Coenzyme PQQ synthesis 35.9 52 0.0018 26.3 5.1 64 382-460 31-94 (95)
180 2w57_A Ferric uptake regulatio 35.6 30 0.001 30.0 3.9 48 411-462 21-71 (150)
181 2hzt_A Putative HTH-type trans 35.5 34 0.0012 27.6 4.0 46 411-464 18-63 (107)
182 1yg2_A Gene activator APHA; vi 35.5 25 0.00085 31.4 3.4 52 411-463 6-57 (179)
183 1u2w_A CADC repressor, cadmium 34.9 41 0.0014 27.8 4.5 43 411-462 46-89 (122)
184 3l7w_A Putative uncharacterize 32.2 31 0.0011 28.0 3.2 49 411-464 13-61 (108)
185 4esf_A PADR-like transcription 32.0 38 0.0013 28.1 3.8 50 411-463 15-64 (117)
186 2p4w_A Transcriptional regulat 31.4 33 0.0011 31.5 3.6 44 411-463 19-62 (202)
187 3cuo_A Uncharacterized HTH-typ 31.2 43 0.0015 25.9 3.8 46 410-464 27-73 (99)
188 2dql_A PEX protein; circadian 30.6 36 0.0012 28.1 3.3 50 412-463 27-76 (115)
189 3df8_A Possible HXLR family tr 30.1 42 0.0014 27.4 3.7 46 411-464 31-78 (111)
190 1z7u_A Hypothetical protein EF 29.9 39 0.0013 27.4 3.5 46 411-464 26-71 (112)
191 2xig_A Ferric uptake regulatio 29.7 49 0.0017 28.6 4.2 48 411-462 31-80 (150)
192 2esh_A Conserved hypothetical 28.7 30 0.001 28.6 2.5 53 411-464 17-70 (118)
193 4ets_A Ferric uptake regulatio 28.4 1.1E+02 0.0038 26.7 6.4 49 410-462 36-88 (162)
194 1xma_A Predicted transcription 28.3 27 0.00091 30.3 2.2 52 411-463 45-96 (145)
195 2f2e_A PA1607; transcription f 27.8 61 0.0021 27.8 4.5 45 411-464 28-72 (146)
196 1sd4_A Penicillinase repressor 26.9 69 0.0023 26.1 4.6 50 411-465 14-64 (126)
197 2d1h_A ST1889, 109AA long hypo 26.4 75 0.0026 24.7 4.6 44 412-464 27-71 (109)
198 1sfx_A Conserved hypothetical 25.9 92 0.0031 24.1 5.0 46 410-464 23-69 (109)
199 2fsw_A PG_0823 protein; alpha- 25.8 46 0.0016 26.7 3.2 46 411-464 29-74 (107)
200 2g9w_A Conserved hypothetical 25.8 74 0.0025 26.7 4.6 52 409-465 11-64 (138)
201 2gmg_A Hypothetical protein PF 25.6 15 0.00053 30.2 0.1 60 410-476 14-77 (105)
202 3k2z_A LEXA repressor; winged 25.5 81 0.0028 28.3 5.1 34 420-462 24-57 (196)
203 3tgn_A ADC operon repressor AD 23.0 81 0.0028 26.1 4.4 45 411-464 42-86 (146)
204 2w25_A Probable transcriptiona 22.9 1.3E+02 0.0044 25.4 5.7 44 410-462 10-54 (150)
205 3i4p_A Transcriptional regulat 22.6 1.1E+02 0.0038 26.4 5.3 44 410-462 6-50 (162)
206 2lkp_A Transcriptional regulat 21.7 79 0.0027 25.5 3.9 44 411-463 36-79 (119)
207 1r7j_A Conserved hypothetical 21.6 1.4E+02 0.0047 23.6 5.2 45 408-462 9-53 (95)
208 1tbx_A ORF F-93, hypothetical 21.6 2.3E+02 0.0079 21.7 6.6 50 411-465 12-62 (99)
209 1sfu_A 34L protein; protein/Z- 21.5 79 0.0027 24.3 3.4 53 411-472 19-73 (75)
210 2e1n_A PEX, period extender; c 21.3 48 0.0016 28.4 2.5 50 412-463 39-88 (138)
211 2e1c_A Putative HTH-type trans 21.0 1.4E+02 0.0047 26.2 5.6 45 409-462 29-74 (171)
212 2pn6_A ST1022, 150AA long hypo 20.9 1.3E+02 0.0044 25.3 5.3 44 410-462 6-50 (150)
213 2p5v_A Transcriptional regulat 20.8 1.3E+02 0.0044 25.9 5.3 44 410-462 13-57 (162)
214 1ub9_A Hypothetical protein PH 20.5 63 0.0021 24.9 2.9 44 411-463 20-64 (100)
215 2cfx_A HTH-type transcriptiona 20.3 1.4E+02 0.0047 25.1 5.3 44 410-462 8-52 (144)
216 3eyy_A Putative iron uptake re 20.2 1.3E+02 0.0044 25.6 5.1 47 412-462 24-71 (145)
No 1
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.4e-38 Score=320.80 Aligned_cols=258 Identities=22% Similarity=0.314 Sum_probs=205.8
Q ss_pred ceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChH-HHHHHHHHHhCC----Ccc
Q 009940 184 YQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEF-HEELLKVVASLP----RKL 258 (522)
Q Consensus 184 ~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~-~~~L~~~~~~~~----~i~ 258 (522)
++|++||||+++.+.+ .+....|+|++..+ ++.+|||||..... .+.+.+.+++.+ +++
T Consensus 1 ~~~v~~~v~~i~~~~p--~~~~~~n~~li~~~--------------~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~ 64 (317)
T 2zo4_A 1 MKALLPGLYLLPVPIP--YPLKTVNLYLLQGA--------------GEVALVDTALGTRAARGALELHLAELGLCFQDVK 64 (317)
T ss_dssp --CCBTTEEEEEEECS--STTCEEEEEEEEET--------------TEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCC
T ss_pred CeeccCCeEEEEecCC--CCCCcEEEEEEEcC--------------CceEEEECCCCCHHHHHHHHHHHHHcCCChhhcC
Confidence 3689999999976432 23345677776643 46899999988753 334555555543 477
Q ss_pred EEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhcc------------------CCC--------------------
Q 009940 259 IVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGK------------------DDW-------------------- 300 (522)
Q Consensus 259 ~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~------------------~~~-------------------- 300 (522)
+||+||.|+||+||+..|++. +++||+++.+...+.. .+.
T Consensus 65 ~Vi~TH~H~DH~gg~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 142 (317)
T 2zo4_A 65 TILLTHHHPDHYGLSGFFEGL--GARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVH 142 (317)
T ss_dssp EEEESCCSHHHHTTHHHHHHT--TCEEEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCC
T ss_pred EEEEcCCCCcccccHHHHHhC--CCEEEEcHHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCC
Confidence 999999999999999999886 8999999876543321 001
Q ss_pred -CCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeCCCCEEEEcccccCCCCcccccC---CCCCHHHHHHHHHHHh
Q 009940 301 -SLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDIT---AGGNMTDYFQSTYKFL 376 (522)
Q Consensus 301 -~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~~vLftGD~l~~~~~~~~~~~---~~~~~~~~~~SL~~l~ 376 (522)
......+.+|+.+.+||.+++++++||||+||+++++++.++||+||+++....++.... ...++.+|++|++++.
T Consensus 143 ~~~~~~~~~~g~~l~~gg~~~~~i~tpGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~ 222 (317)
T 2zo4_A 143 PPQNPLPLRDGEALEVAGKRLRVLWTPGHADGHAAFYLEEEGVLLAGDALLEKVSPNVGLWAYTRENPLKDFLRSLDRLA 222 (317)
T ss_dssp CCSSCEEECTTCEEEETTEEEEEEECCSSSTTCEEEEETTTTEEEEETSCCSSSCCCCCCCTTSCSCHHHHHHHHHHHHH
T ss_pred CCCCceEECCCCEEEeCCceEEEEECCCCCcccEEEEeCCCCEEEECCEecCCCCCCCcccCCCCCchHHHHHHHHHHHh
Confidence 124567889999999999999999999999999999999999999999987655443321 2357899999999999
Q ss_pred cCCCcEEEcCCCCCcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhc-CCCCcchhHHHHHHHHHHHHHHH
Q 009940 377 ELSPHALIPMHGRVNLWPKHMLCGYLKNRRAREAAILQAIENGVETLFDIVANVYS-EVPRSFWIPAASNVRLHVDHLAD 455 (522)
Q Consensus 377 ~l~~~~ivPgHG~~~~~~~~~i~~~l~~~~~r~~~il~~l~~g~~T~~ei~~~~y~-~~~~~~~~~a~~~v~ahL~~L~~ 455 (522)
++++++++||||+++.+..+.++++++++++|++++++++ +++.|+.|+++.+|+ ++++.++.++..++.+||++|++
T Consensus 223 ~l~~~~v~pgHg~~~~~~~~~i~~~~~~~~~~~~~i~~~l-~~~~t~~ei~~~~~~~~~~~~~~~~a~~e~~ahL~~L~~ 301 (317)
T 2zo4_A 223 DLGARVAYAGHFGPIADVRQRAEELKAHHQARLEALLALL-DGPKTAWELSLHLFPQELDPAGRRFAFAETLAHLEYLRE 301 (317)
T ss_dssp TSCCSEEEESSSSCBSCHHHHHHHHHHHHHHHHHHHHHHC-SSCBCHHHHHHHHCC-------CHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEECCCCCccCCHHHHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHHhhcccChhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888999999999999999999988 567799999999999 99999999999999999999999
Q ss_pred CCCcc
Q 009940 456 QNKLP 460 (522)
Q Consensus 456 ~g~i~ 460 (522)
+|+|.
T Consensus 302 ~g~v~ 306 (317)
T 2zo4_A 302 EGAVG 306 (317)
T ss_dssp TTSEE
T ss_pred CCCEE
Confidence 99997
No 2
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=312.30 Aligned_cols=270 Identities=24% Similarity=0.353 Sum_probs=217.7
Q ss_pred CccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCC--hHHHHHHHHHHhCC-Cc
Q 009940 181 TLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRS--EFHEELLKVVASLP-RK 257 (522)
Q Consensus 181 ~~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~--~~~~~L~~~~~~~~-~i 257 (522)
.....+++||||++....+...++...|+|++..+ ++.+|||||... ...+.+.+.+...+ ++
T Consensus 6 ~~~~~~v~~~v~~v~g~~p~p~~~~~~n~~li~~~--------------~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i 71 (289)
T 4ad9_A 6 LQRVERLSNRVVRVLGCNPGPMTLQGTNTYLVGTG--------------PRRILIDTGEPAIPEYISCLKQALTEFNTAI 71 (289)
T ss_dssp CCSEEECSSSEEEEECSCCBTTTBTCCEEEEECSS--------------SSEEEECCCSTTCHHHHHHHHHHHHHTTCCE
T ss_pred CcchhccCCCeEEEeCCCCCCCcCCceEEEEEecC--------------CceEEEeCCCCCChHHHHHHHHHHHHcCCCc
Confidence 44568999999999654332233445566666543 568999999653 22345555555544 57
Q ss_pred cEEEEcCCCccccCCHHHHHHhC---CCCEEEEcHhHHHHhcc-CCCCCCceecCCCceEEECCEEEEEEeCCCCCCCCe
Q 009940 258 LIVFVTHHHRDHVDGLSIIQKCN---PDAILLAHENTMRRIGK-DDWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHV 333 (522)
Q Consensus 258 ~~IiiTH~H~DHiGG~~~l~~~~---p~a~V~a~~~~~~~l~~-~~~~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i 333 (522)
++||+||.|.||+||+..|.+.+ +++++++++........ ......+..+.+|+.+.+||.+++++++||||+||+
T Consensus 72 ~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~~~~ 151 (289)
T 4ad9_A 72 QEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQREEIIGNGEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHM 151 (289)
T ss_dssp EEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCCSSCCCCCBTTTTBCEEECCTTCEEEETTEEEEEEECCSSSTTCE
T ss_pred eEEEEcCCCCcccccHHHHHHhhccCCCceEEecCCCcchhhhccCCCCceEEcCCCCEEEeCCeEEEEEECCCCCCCCE
Confidence 79999999999999999999987 58899987644211100 012234678899999999999999999999999999
Q ss_pred EEEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCcCChHHHHHHHHHHHHHHHHHHH
Q 009940 334 ALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLELSPHALIPMHGRVNLWPKHMLCGYLKNRRAREAAIL 413 (522)
Q Consensus 334 ~l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l~~~~ivPgHG~~~~~~~~~i~~~l~~~~~r~~~il 413 (522)
++++++.++||+||+++..+... ..++.+|++|++++.+++++.++||||+++.+..+.++++++++++|.++|+
T Consensus 152 ~~~~~~~~~lftGD~~~~~~~~~-----~~~~~~~~~sl~~l~~l~~~~v~pgHg~~~~~~~~~i~~~~~~~~~r~~~i~ 226 (289)
T 4ad9_A 152 ALLLEEENAIFSGDCILGEGTTV-----FEDLYDYMNSLKELLKIKADIIYPGHGPVIHNAEAKIQQYISHRNIREQQIL 226 (289)
T ss_dssp EEEETTTTEEEEETSSCSSSCCC-----CSCHHHHHHHHHHHHHHTCSEEEESSSSCBSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCEEEEecccCCCCCcC-----cCCHHHHHHHHHHHHcCCCCEEEeCCCChhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988765432 3489999999999999999999999999998888999999999999999999
Q ss_pred HHHHcC---CCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee-ccchhh
Q 009940 414 QAIENG---VETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF-SILKFR 469 (522)
Q Consensus 414 ~~l~~g---~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~-~~~~~~ 469 (522)
+++.++ +.|+.||++.+|+++++.++.++..++.+||++|+++|+|.+.. +...|+
T Consensus 227 ~~l~~~~~~~~t~~ei~~~~~~~~p~~l~~~a~~~~~ahL~~L~~~g~v~~~~~~~~~w~ 286 (289)
T 4ad9_A 227 TLFRENFEKSFTVMELVKIIYKNTPENLHEMAKHNLLLHLKKLEKEGKIFSNTDPDKKWK 286 (289)
T ss_dssp HHHHHTTTCCBCHHHHHHHHTTTSCGGGHHHHHHHHHHHHHHHHHTTSEEECCCSSCCEE
T ss_pred HHHHhcCCCCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHCCcEEEEeCCCceee
Confidence 999863 56999999999999999999999999999999999999998763 334554
No 3
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.97 E-value=1.4e-30 Score=263.44 Aligned_cols=251 Identities=19% Similarity=0.221 Sum_probs=175.0
Q ss_pred ccceecCCeEEEEeccCCCCCCCccccEEEE-ccCCCCCCCcceEEEecCCeEEEcCCCCChH---HHHHHHHHHhCCCc
Q 009940 182 LSYQEYPPGVILVPMQSRTAKPFLTTNLIVF-APDSVSDDCGNHRFVAQGEALIVDPGCRSEF---HEELLKVVASLPRK 257 (522)
Q Consensus 182 ~~~~evapGv~~v~~~~~~~~p~~~~N~~~i-~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~---~~~L~~~~~~~~~i 257 (522)
...+++.+|||++. ....|+|++ ..+ ++.+|||||..... .+.+.+.+....++
T Consensus 7 ~~~~~v~~~v~~ig--------~~~~n~~li~~~~--------------~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i 64 (303)
T 2vw8_A 7 SAPGQLDDDLCLLG--------DVQVPVFLLRLGE--------------ASWALVEGGISRDAELVWADLCRWVADPSQV 64 (303)
T ss_dssp CSSEEEETTEEEES--------CTTSCEEEEEEET--------------TEEEEECCCCGGGHHHHHHHHHHHCSCGGGE
T ss_pred CCceeecCCeEEec--------CCCceEEEEEeCC--------------CceEEEECCCCCcHHHHHHHHHHHhcCcccc
Confidence 34578899999982 123577776 232 56899999986421 22333321122356
Q ss_pred cEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC---------------CC----------CCCceecCCCce
Q 009940 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD---------------DW----------SLGYTSVSGSED 312 (522)
Q Consensus 258 ~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~---------------~~----------~~~~~~l~~g~~ 312 (522)
++||+||.|.||+||+..+++.+|+++|++++.+.+.+... .+ ..+...+.+|+.
T Consensus 65 ~~Ii~TH~H~DH~gg~~~l~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 144 (303)
T 2vw8_A 65 HYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEW 144 (303)
T ss_dssp EEEECCCCSTTTTTTHHHHGGGCTTCEEEEEHHHHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCE
T ss_pred eEEEeccCCccccCCHHHHHHhCCCCeEEECHHHHHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCE
Confidence 79999999999999999999999999999999887654321 00 122356789999
Q ss_pred EEECC-EEEEEEeCCCCCCCCeEEEeCCCCEEEEcccccCCCC--cccccCCCCCHHHHHHHHHHHhcCCCc-EEEcCCC
Q 009940 313 ICVGG-QRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGS--AVLDITAGGNMTDYFQSTYKFLELSPH-ALIPMHG 388 (522)
Q Consensus 313 l~lgg-~~l~vi~tPGHT~g~i~l~~~~~~vLftGD~l~~~~~--~~~~~~~~~~~~~~~~SL~~l~~l~~~-~ivPgHG 388 (522)
+++|+ .+++++++||||+||+++++++.++||+||++..... .........+..+|++|++++.+++++ +++||||
T Consensus 145 ~~lg~g~~l~~i~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~v~pgHg 224 (303)
T 2vw8_A 145 LELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESLERLQRLPTLLQLIPGHG 224 (303)
T ss_dssp EEEETTEEEEEEECTTSSTTCEEEEETTTTEEEEETTTCEECTTTCSEECCCSSCHHHHHHHHHHHHTSSCCSEEEESSS
T ss_pred EecCCCeEEEEEECCCCCcccEEEEECCCCEEEEcCccCcccCcccccCCCCCCCHHHHHHHHHHHhcCCCCeEEECCCC
Confidence 99988 9999999999999999999999999999999743211 111111357999999999999999999 9999999
Q ss_pred CCcCChHHHHHHHHHH-----HHHHHHHHHHHHHcCC-CCHHHHHH---HHhcCCCCcchhHHH-HHHHHHHHHHHHCCC
Q 009940 389 RVNLWPKHMLCGYLKN-----RRAREAAILQAIENGV-ETLFDIVA---NVYSEVPRSFWIPAA-SNVRLHVDHLADQNK 458 (522)
Q Consensus 389 ~~~~~~~~~i~~~l~~-----~~~r~~~il~~l~~g~-~T~~ei~~---~~y~~~~~~~~~~a~-~~v~ahL~~L~~~g~ 458 (522)
++..+ +.+.+++++ ++.+++ | .++++. .+..|++. .+|+..+..++..+. .++.+|+..+..+..
T Consensus 225 ~~~~~--~~~~~~l~~~~~~~~~~~~~-i--~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 299 (303)
T 2vw8_A 225 GLLRG--RLAADGAESAYTECLRLCRR-L--LWRQSMGESLDELSEELHRAWGGQSVDFLPGELHLGSMRRMLEILSRQA 299 (303)
T ss_dssp CEEEH--HHHHTHHHHHHHHHHHHHHH-H--HHHHHTTCCHHHHHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred CccCc--hHHHHHHHHHHHHHHHHHHH-H--HHhhcCcHHHHHHHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhh
Confidence 98753 456666766 333333 3 555433 15666655 679887766655544 455555544444434
Q ss_pred c
Q 009940 459 L 459 (522)
Q Consensus 459 i 459 (522)
+
T Consensus 300 ~ 300 (303)
T 2vw8_A 300 L 300 (303)
T ss_dssp -
T ss_pred c
Confidence 3
No 4
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.97 E-value=1.4e-30 Score=289.69 Aligned_cols=337 Identities=13% Similarity=0.102 Sum_probs=225.5
Q ss_pred EEEEeEcCCC-CCCcccccccccHHHHHHHHHhc-CCCCCccchhhhhhhccccccccccCCCCCccceecCCeEEEEec
Q 009940 119 VYIMGKLLDG-NQILQEGCKWMSTQSCINCLAEV-KPSTDRVGPLVVIGLLNDLVQWRKWKVPPTLSYQEYPPGVILVPM 196 (522)
Q Consensus 119 ~ff~a~~p~~-~~~e~~~~~W~~~~~al~~l~~~-~~~~~r~g~~~~~gl~~~~~~~~~~~~~~~~~~~evapGv~~v~~ 196 (522)
|=|+|.++.+ ...+.....|-. ..++.|.+- .+.+.+ ++++..+.... .....++.||||+++
T Consensus 54 ~g~~~~~~~~~~~~~~~~~~~~~--~~~~f~~~~~~~~~v~------pslw~~~~l~~------~~~l~~V~~gVy~i~- 118 (658)
T 2cfu_A 54 RGLIRRPERLLIRNPDGSVAWQL--GGYDFLLDGKPRDSIN------PSLQRQALLNL------KYGLFEVAEGIYQVR- 118 (658)
T ss_dssp TTEEECCSSCEEECTTSCEEEEC--GGGGGGTTCCCCTTSC------HHHHHHHHHTT------CCEEEEEETTEEEEE-
T ss_pred CCCcccCCccceeCCCCCEeecc--ccccccccCCCCCCcC------hHHHHHHHhhc------cCCcEEEeCCEEEEe-
Confidence 3478888776 334555667753 344455432 455555 56665332222 345689999999995
Q ss_pred cCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHh---CCCccEEEEcCCCccccCCH
Q 009940 197 QSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVAS---LPRKLIVFVTHHHRDHVDGL 273 (522)
Q Consensus 197 ~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~---~~~i~~IiiTH~H~DHiGG~ 273 (522)
++...|+|++.++ ++.+|||||........+.+.+.+ ..++++||+||.|.||+||+
T Consensus 119 ------g~~~~N~ylI~~~--------------~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~ 178 (658)
T 2cfu_A 119 ------GFDLANITFIRGD--------------SGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGV 178 (658)
T ss_dssp ------SSSSSCEEEEECS--------------SSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTG
T ss_pred ------cCCCeEEEEEEEC--------------CEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCH
Confidence 2334677777653 568999999987544444444332 34678999999999999999
Q ss_pred HHHHHh----CCCCEEEEcHhHHHHhcc------------------CCC-----------------------CCCceec-
Q 009940 274 SIIQKC----NPDAILLAHENTMRRIGK------------------DDW-----------------------SLGYTSV- 307 (522)
Q Consensus 274 ~~l~~~----~p~a~V~a~~~~~~~l~~------------------~~~-----------------------~~~~~~l- 307 (522)
..|.+. +++++||+|+.+.+.+.. ... ..+...+
T Consensus 179 ~~l~~~~~~~~~~a~V~a~~~~~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~ 258 (658)
T 2cfu_A 179 RGLVEPQQVASGAVQIIAPAGFMEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIE 258 (658)
T ss_dssp GGTCCHHHHHTTSSEEEEETTHHHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEEC
T ss_pred HHHHhhhhccCCCCEEEEchhHHHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEe
Confidence 999763 679999999876543210 000 0122445
Q ss_pred CCCceEEECCEEEEEEeCCCC-CCCCeEEEeCCCCEEEEcccccCCCCcccc---cCCCCCHHHHHHHHHHHhcC---CC
Q 009940 308 SGSEDICVGGQRLTVVFSPGH-TDGHVALLHASTNSLIVGDHCVGQGSAVLD---ITAGGNMTDYFQSTYKFLEL---SP 380 (522)
Q Consensus 308 ~~g~~l~lgg~~l~vi~tPGH-T~g~i~l~~~~~~vLftGD~l~~~~~~~~~---~~~~~~~~~~~~SL~~l~~l---~~ 380 (522)
.+|+++.+||.+++++++||| |+||+++|+|+.++||+||+++.. .+.+. .....+...|.++|++++++ ++
T Consensus 259 ~dG~~l~lgg~~l~vi~tPGHhTpg~i~~~~p~~~vLftGD~v~~~-~~~i~~~~g~~~~d~~~~~~sL~~l~~l~~l~~ 337 (658)
T 2cfu_A 259 GEGEDLVLDGVPFTFQNTPGTESPAEMNIWLPRQKALLMAENVVGT-LHNLYTLRGAEVRDALGWSKYINQALHRFGRQA 337 (658)
T ss_dssp TTEEEEEETTEEEEEEECTTSSSSSBEEEEETTTTEEECTTTSCSS-CCCSSCTTCCCCCCHHHHHHHHHHHHHHTGGGC
T ss_pred cCceEEEECCEEEEEEeCCCCCCCCcEEEEECCCCEEEEecccccc-CCccccCCCcccCCHHHHHHHHHHHHHHhCCCC
Confidence 588999999999999999999 999999999999999999998754 22221 11235888999999988765 89
Q ss_pred cEEEcCCCCCcCChHHHHHHHHHHHHHHHHHHHH----HHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHC
Q 009940 381 HALIPMHGRVNLWPKHMLCGYLKNRRAREAAILQ----AIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQ 456 (522)
Q Consensus 381 ~~ivPgHG~~~~~~~~~i~~~l~~~~~r~~~il~----~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~ 456 (522)
++++||||+++.+ .+.+.+++++++++.+.+.+ .+++ ..|++||++.+ .+|+.+ ..
T Consensus 338 ~~v~PGHg~p~~g-~~~i~~~l~~~rd~l~~l~~~v~~~~~~-g~t~~ei~~~i--~lp~~l---------------~~- 397 (658)
T 2cfu_A 338 EVMFAVHNWPRWG-NAEIVEVLEKQRDLYGYLHDQTLHLANQ-GVTIGQVHNRL--RLPPSL---------------DQ- 397 (658)
T ss_dssp SEEECSSSCCEES-HHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCCTTTGGGTC--CCCHHH---------------HT-
T ss_pred cEEEeCCCCccCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHh--cCChhH---------------hc-
Confidence 9999999998866 67788899888888865555 4444 44777777765 333211 00
Q ss_pred CCccceeccchhhhccchhhHHHHHH-Hhhhhhhhhhhccch---hHHHhH-HhhhchhHHHHHHhh
Q 009940 457 NKLPKEFSILKFRKTCGLHFLLRWAW-TYLRFQVRYQKLSMS---KLLIGG-AAVAGFAVFFSIRNK 518 (522)
Q Consensus 457 g~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~ 518 (522)
..... ..+-...+.+|-++ .|.+|+++++....| .-.++- ..++||+-.+..++|
T Consensus 398 -----~w~~~--~~~g~~~~nvr~vy~~y~Gw~dgnp~~l~~l~p~~~a~~~v~~~gg~~~~~~~a~ 457 (658)
T 2cfu_A 398 -----EWYDR--GYHGSVSHNARAVLNRYLGYYDGNPATLDPLSPEDSAGRYVEYMGGAERLLEQAR 457 (658)
T ss_dssp -----CGGGS--CSSSCHHHHHHHHHHHHHCSCCSCGGGTSCCCHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred -----Ccccc--ccCchhhhhHHHHHHHhcCcccCCcccccCCChHHHHHHHHHHhcCHHHHHHHHH
Confidence 00000 11122345566665 899999999966444 333332 227788766666654
No 5
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=99.94 E-value=2e-32 Score=303.49 Aligned_cols=337 Identities=16% Similarity=0.103 Sum_probs=235.0
Q ss_pred EEEEeEcCCC-CCCcccccccccHHHHHHHHHhc-CCCCCccchhhhhhhccccccccccCCCCCccceecCCeEEEEec
Q 009940 119 VYIMGKLLDG-NQILQEGCKWMSTQSCINCLAEV-KPSTDRVGPLVVIGLLNDLVQWRKWKVPPTLSYQEYPPGVILVPM 196 (522)
Q Consensus 119 ~ff~a~~p~~-~~~e~~~~~W~~~~~al~~l~~~-~~~~~r~g~~~~~gl~~~~~~~~~~~~~~~~~~~evapGv~~v~~ 196 (522)
|=|+|. +.+ ...+.....|-. .+++.|.+- .|.+.+ ++|+..+.... .....+|+||||+++
T Consensus 65 rg~i~~-~~~~~~~~~g~~~~~~--~~~~f~~~~~~p~tvn------pslwr~~~~~~------~~~l~eV~~gVy~i~- 128 (668)
T 2yhe_A 65 RGLIAP-FSGQIKNAEGQVVWDM--GAYQFLNDKDAADTVN------PSLWRQAQLNN------IAGLFEVMPKLYQVR- 128 (668)
Confidence 456777 666 445566677753 455666443 566666 77777543333 344689999999984
Q ss_pred cCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHh---CCCccEEEEcCCCccccCCH
Q 009940 197 QSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVAS---LPRKLIVFVTHHHRDHVDGL 273 (522)
Q Consensus 197 ~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~---~~~i~~IiiTH~H~DHiGG~ 273 (522)
++...|+|++.++ ++.+|||||......+.+.+.+.+ ..++++||+||.|+||+||+
T Consensus 129 ------g~~~~N~~lI~~~--------------~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~ 188 (668)
T 2yhe_A 129 ------GLDPANMTIIEGD--------------SGLVLIDTLTTAETARAALDLYFQHRPKKPIVAVVYSHSHIDHFGGA 188 (668)
Confidence 2344677777643 468999999876544444444443 23567999999999999999
Q ss_pred HHHHHh----CCCCEEEEcHhHHHHh--c----------c--C--C--C-------------------C-----CCce-e
Q 009940 274 SIIQKC----NPDAILLAHENTMRRI--G----------K--D--D--W-------------------S-----LGYT-S 306 (522)
Q Consensus 274 ~~l~~~----~p~a~V~a~~~~~~~l--~----------~--~--~--~-------------------~-----~~~~-~ 306 (522)
..|.+. .++++||+|+.+.+.. . . . . . . .+.. .
T Consensus 189 ~~l~~~~~~~~~~a~I~a~~~~~e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~~P~~~~ 268 (668)
T 2yhe_A 189 RGIIDEADVKAGKVKVFAPSGFMEHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLVAPNVLI 268 (668)
Confidence 999863 4689999998752210 0 0 0 0 0 0 0111 2
Q ss_pred cCCCceEEECCEEEEEEeCCC-CCCCCeEEEeCCCCEEEEcccccCCCCcccc---cCCCCCHHHHHHHHHHHhcC---C
Q 009940 307 VSGSEDICVGGQRLTVVFSPG-HTDGHVALLHASTNSLIVGDHCVGQGSAVLD---ITAGGNMTDYFQSTYKFLEL---S 379 (522)
Q Consensus 307 l~~g~~l~lgg~~l~vi~tPG-HT~g~i~l~~~~~~vLftGD~l~~~~~~~~~---~~~~~~~~~~~~SL~~l~~l---~ 379 (522)
+++|+++.+||.+++++++|| ||+||+++|+|+.++||+||+++.... ++. .....++..|++||++++++ +
T Consensus 269 ~~dg~~l~lgg~~l~vi~tPG~Htpg~i~~~~p~~~vLftGD~~~~~~~-ni~~~~g~~~~d~~~w~~SL~~l~~l~~~~ 347 (668)
T 2yhe_A 269 EKPYERHTVDGVELEFQLTLGSEAPSDMNIYLPQFKVLNTADNAPPAMH-NLLTPRGAEVRDAKAWAGYIDASLEKYGDR 347 (668)
Confidence 357899999999999999999 999999999999999999999885432 221 11235788999999999998 8
Q ss_pred CcEEEcCCCCCcCChHHHHHHHHHHHHHHH----HHHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHH
Q 009940 380 PHALIPMHGRVNLWPKHMLCGYLKNRRARE----AAILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLAD 455 (522)
Q Consensus 380 ~~~ivPgHG~~~~~~~~~i~~~l~~~~~r~----~~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~ 455 (522)
+++++||||+++.+ .+.+.++++++++++ +++++.+++| .|++||++.+| ++|+.+..
T Consensus 348 ~~~vvPGHg~p~~g-~~~i~~~l~~~rd~l~~l~~qvl~~l~~G-~t~~EI~~~iy-~lp~~l~~--------------- 409 (668)
T 2yhe_A 348 TDVLIQQHNWPVWG-GDKVRTYLADQRDMYAFLNNRALNLMNKG-LTLHEIAAEVS-KLPGELDR--------------- 409 (668)
Confidence 89999999998766 667888888888888 6777778776 59999999999 87764210
Q ss_pred CCCccceeccchhhhccchhhHHHHHH-HhhhhhhhhhhccchhHHHhHHh----hhchhHHHHHHhh
Q 009940 456 QNKLPKEFSILKFRKTCGLHFLLRWAW-TYLRFQVRYQKLSMSKLLIGGAA----VAGFAVFFSIRNK 518 (522)
Q Consensus 456 ~g~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 518 (522)
.-.. +..+-.+.+.+|-++ .|.+|+++++....|..-...+. |+||+-.+..++|
T Consensus 410 ------~w~~--~~~yg~~~~nvr~vy~~y~Gw~dgnp~~L~p~~p~~~a~~~v~~~Gg~~~~~~~a~ 469 (668)
T 2yhe_A 410 ------KWYL--RSYYGALSTNLRAVYQRYLGFYDGNPANLDPFPPVEAGKRYVEAMGGADAVLKQMR 469 (668)
Confidence 0000 011112356677666 89999999998766655444443 7788766666654
No 6
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.96 E-value=5.3e-29 Score=240.57 Aligned_cols=204 Identities=14% Similarity=0.175 Sum_probs=152.8
Q ss_pred ccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhC--CCccE
Q 009940 182 LSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL--PRKLI 259 (522)
Q Consensus 182 ~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~--~~i~~ 259 (522)
++++++++|||++.............|+|++..+ ++.+|||||......+.+.+.+++. .++++
T Consensus 2 ~~~~~i~~~v~~i~~~~~~~~~~~~~n~~li~~~--------------~~~iLiD~G~~~~~~~~~~~~l~~~~g~~i~~ 67 (223)
T 1m2x_A 2 VKIEKLKDNLYVYTTYNTFNGTKYAANAVYLVTD--------------KGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIM 67 (223)
T ss_dssp EEEEEEETTEEEEEEEEEETTEEEEEEEEEEEET--------------TEEEEESCCSSGGGHHHHHHHHHHHHCCCEEE
T ss_pred ceEEEeeCCEEEEEEeccCCCCcccccEEEEEeC--------------CEEEEEeCCCChhHHHHHHHHHHHHhCCCeEE
Confidence 4567899999998643210001112355555432 5689999998754444455445443 36789
Q ss_pred EEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecCCCceEEECCEEEEEEe-CCCCCCCCeEEEeC
Q 009940 260 VFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVVF-SPGHTDGHVALLHA 338 (522)
Q Consensus 260 IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~~g~~l~lgg~~l~vi~-tPGHT~g~i~l~~~ 338 (522)
|++||.|.||+||+..+.+ ++++||+++.+.+.+.......+...+.+|+.+.+|+.++++++ +||||+|+++++++
T Consensus 68 vi~TH~H~DH~gg~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~~~~~~~~~ 145 (223)
T 1m2x_A 68 NIATHSHDDRAGGLEYFGK--IGAKTYSTKMTDSILAKENKPRAQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWFP 145 (223)
T ss_dssp EECSSSSTTTTTTHHHHHH--TTCEEEEEHHHHHHHHHTTCCCCSEEESSCEEEEETTEEEEEECCCSSSSSSCCEEEET
T ss_pred EEeccCCccccCchhhHhh--CCCeEEEcHHHHHHHHhcCccCCceecCCCceEEECCEEEEEEecCCCCCCCCEEEEEC
Confidence 9999999999999999987 59999999999888765544444677899999999999999996 99999999999999
Q ss_pred CCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcC--CCcEEEcCCCCCcCChHHHHHHHHH
Q 009940 339 STNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNLWPKHMLCGYLK 403 (522)
Q Consensus 339 ~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l--~~~~ivPgHG~~~~~~~~~i~~~l~ 403 (522)
+.++||+||+++..+.+.....+..+..+|.+|++++.++ +.+.++||||++. + .+.++++++
T Consensus 146 ~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~i~pgHg~~~-~-~~~l~~~~~ 210 (223)
T 1m2x_A 146 KEKVLVGGCIIKSADSKDLGYIGEAYVNDWTQSVHNIQQKFSGAQYVVAGHDDWK-D-QRSIQHTLD 210 (223)
T ss_dssp TTTEEEEETTSCCTTCSSCCCCTTCCHHHHHHHHHHHHHHTTTCSEEEESBSCCC-S-TTHHHHHHH
T ss_pred CCCEEEEecccccCcccccccCCCCCHHHHHHHHHHHHHhCCCCCEEEeCCCCcC-C-HHHHHHHHH
Confidence 8899999998765433333334567999999999999986 7789999999987 2 334444433
No 7
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.96 E-value=3.8e-29 Score=249.41 Aligned_cols=195 Identities=15% Similarity=0.185 Sum_probs=145.3
Q ss_pred CccceecCCeEEEEec-cCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhC-C-Cc
Q 009940 181 TLSYQEYPPGVILVPM-QSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL-P-RK 257 (522)
Q Consensus 181 ~~~~~evapGv~~v~~-~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~-~-~i 257 (522)
++.++|++||||.+.. ....+.+...+|+|++.++ ++++|||||.+....+.+.+.+++. + .+
T Consensus 48 ~~~~~~~~~~v~~~~~~~~~~~~G~~~~N~ylv~~~--------------~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I 113 (270)
T 4eyb_A 48 DLVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDG--------------GRVLVVDTAWTDDQTAQILNWIKQEINLPV 113 (270)
T ss_dssp TEEEEEEETTEEEEEEEEEETTTEEEEEEEEEEEET--------------TEEEEESCCSSHHHHHHHHHHHHHHTCCCE
T ss_pred cceEEEecCCeEEEEeecccCCCCccceEEEEEEEC--------------CEEEEEeCCCCHHHHHHHHHHHHHhcCCce
Confidence 5668999999998631 1111111122455555442 5689999998876666777666553 3 36
Q ss_pred cEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCC--------ceecCCCceEEECCEEEEEEeCCCCC
Q 009940 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLG--------YTSVSGSEDICVGGQRLTVVFSPGHT 329 (522)
Q Consensus 258 ~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~--------~~~l~~g~~l~lgg~~l~vi~tPGHT 329 (522)
++||+||.|+||+||+..|++. ++++|+++.+...+........ ...+.++..+..|+.. .++++||||
T Consensus 114 ~~Ii~TH~H~DH~gg~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~pgHT 190 (270)
T 4eyb_A 114 ALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLK-VFYPGPGHT 190 (270)
T ss_dssp EEEEECSSSHHHHTTHHHHHHT--TCEEEEEHHHHHHGGGGTCCCCSEEECBCTTSBBCGGGSTTCTTEE-EECCCSSSS
T ss_pred EEEEeCCCChhhcCcHHHHHHC--CCeEEECHHHHHHHHhcCccccccccCCCCceeecCceeeecCcee-EEecccccC
Confidence 6999999999999999999886 8999999999888765433221 2234555566666633 355789999
Q ss_pred CCCeEEEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcC--CCcEEEcCCCCCcC
Q 009940 330 DGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNL 392 (522)
Q Consensus 330 ~g~i~l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l--~~~~ivPgHG~~~~ 392 (522)
+||+++|++++++||+||+++....+.....+++++.+|++||++++++ +.++|+||||++..
T Consensus 191 ~g~~~~~~~~~~vLfsGD~l~~~~~~~~~~~~~~~~~~~~~Sl~~l~~~~~d~~~v~PGHG~p~~ 255 (270)
T 4eyb_A 191 SDNITVGIDGTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDS 255 (270)
T ss_dssp SSCCEEEETTSSEEECTTTCCCTTCSCCCCCTTCCTTTHHHHHHHHHHHSTTCCEEECSSSCCBC
T ss_pred CCCEEEEecCCcEEEEeCeecCCCCCCcCCCCCCCHHHHHHHHHHHHhhCCCCcEEEcCCCCCCC
Confidence 9999999999999999999988777766555678999999999999874 56789999999863
No 8
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.96 E-value=1.4e-28 Score=236.45 Aligned_cols=197 Identities=16% Similarity=0.179 Sum_probs=155.2
Q ss_pred CCcccee-cCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHh--CCC
Q 009940 180 PTLSYQE-YPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVAS--LPR 256 (522)
Q Consensus 180 ~~~~~~e-vapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~--~~~ 256 (522)
+.+.+++ +++|+|++........+....|+|++..+ ++.+|||||........+.+.+.. ..+
T Consensus 3 ~~~~~~~~l~~~v~~~~~~~~~~~~~~~~n~~li~~~--------------~~~iLiD~G~~~~~~~~~~~~l~~~~~~~ 68 (219)
T 3l6n_A 3 KDFVIEPPIKNNLHIYKTFGVFGGKEYSANSMYLVTK--------------KGVVLFDVPWEKVQYQSLMDTIKKRHNLP 68 (219)
T ss_dssp CCCEECCCBTTTEEEEEEEEEETTEEEEEEEEEEEET--------------TEEEEESCCSSGGGHHHHHHHHHHHHSCC
T ss_pred CccceEeeecCCEEEEEeccccCCccccceEEEEEeC--------------CEEEEEeCCCChHHHHHHHHHHHHhcCCc
Confidence 4677889 99999998643211111112355555432 568999999876444455555543 246
Q ss_pred ccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecCCCceEEECCEEEEEEe-CCCCCCCCeEE
Q 009940 257 KLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVVF-SPGHTDGHVAL 335 (522)
Q Consensus 257 i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~~g~~l~lgg~~l~vi~-tPGHT~g~i~l 335 (522)
+++|++||.|.||+||+..|++ + +++||+++.+.+.+...........+.+|+.+.+|+.++++++ +||||+|++++
T Consensus 69 i~~ii~TH~H~DH~gg~~~l~~-~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~ 146 (219)
T 3l6n_A 69 VVAVFATHSHDDRAGDLSFFNN-K-GIKTYATAKTNEFLKKDGKATSTEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVV 146 (219)
T ss_dssp EEEEECSSSSTTTTCCTHHHHH-T-TCEEEECHHHHHHHHHTTCCCCSEECCTTSEEEETTEEEEEECCCCSSSSSCCEE
T ss_pred eeEEEecCCCcccccCHHHHHh-C-CCEEEEcHHHHHHHHhcCCCCCcEecCCCCEEEECCEEEEEEeCCCCCCCCCEEE
Confidence 7899999999999999999987 3 8999999999988877665666788999999999999999999 89999999999
Q ss_pred EeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcC--CCcEEEcCCCCCcC
Q 009940 336 LHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNL 392 (522)
Q Consensus 336 ~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l--~~~~ivPgHG~~~~ 392 (522)
++++.+++|+||+++..+.+.+...+.++..+|++|++++.++ +.++++||||++..
T Consensus 147 ~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 205 (219)
T 3l6n_A 147 WFPKYNVLDGGCLVKSNSATDLGYIKEANVEQWPKTINKLKAKYSKATLIIPGHDEWKG 205 (219)
T ss_dssp EETTTTEEEEETTSCCTTCSSCCCCTTCCTTTHHHHHHHHHHHCTTCSEEEESBSCCTT
T ss_pred EECCCCEEEECCeeeccccccccccCccCHHHHHHHHHHHHHhCCCCCEEECCCCCCCC
Confidence 9999999999999986555544444677899999999999985 57899999999864
No 9
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.96 E-value=2.5e-28 Score=237.40 Aligned_cols=197 Identities=15% Similarity=0.198 Sum_probs=150.3
Q ss_pred CCccceecCCeEEEEeccCCCC-CCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhC--CC
Q 009940 180 PTLSYQEYPPGVILVPMQSRTA-KPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL--PR 256 (522)
Q Consensus 180 ~~~~~~evapGv~~v~~~~~~~-~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~--~~ 256 (522)
..+.++++.+|||++....... ......|+|++..+ ++.+|||||........+.+.+++. .+
T Consensus 9 ~~~~~~~i~~~v~~i~~~~~~~~~g~~~~n~~li~~~--------------~~~iLiD~G~~~~~~~~~~~~l~~~~~~~ 74 (232)
T 1a7t_A 9 DDISITQLSDKVYTYVSLAEIEGWGMVPSNGMIVINN--------------HQAALLDTPINDAQTEMLVNWVTDSLHAK 74 (232)
T ss_dssp SSEEEEECSSSEEEEEEEEEETTTEEEEEEEEEEEET--------------TEEEEESCCSSHHHHHHHHHHHHHHHCCE
T ss_pred CCeEEEEecCCeEEEEeccCCCCCccccceEEEEEeC--------------CEEEEEeCCCCHHHHHHHHHHHHHhcCCC
Confidence 4677889999999986421100 00111344444432 4589999998754334455544443 35
Q ss_pred ccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecCCCceEEECCEEEEEEe-CCCCCCCCeEE
Q 009940 257 KLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVVF-SPGHTDGHVAL 335 (522)
Q Consensus 257 i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~~g~~l~lgg~~l~vi~-tPGHT~g~i~l 335 (522)
+++|++||.|.||+||+..+++ ++++||+++.+.+.+.......+...+.+|+.+.+|+.++++++ +||||+|++++
T Consensus 75 i~~ii~TH~H~DH~gg~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~ 152 (232)
T 1a7t_A 75 VTTFIPNHWHGDCIGGLGYLQR--KGVQSYANQMTIDLAKEKGLPVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVV 152 (232)
T ss_dssp EEEEECSSSSHHHHTTHHHHHH--TTCEEEEEHHHHHHHHHHTCCCCSEEESSEEEEEETTEEEEEECCCCSSSTTCCEE
T ss_pred eEEEEeCCCCccccCCHHHHHh--CCCeEEEcHHHHHHHHhcCCCCCceecCCCCEEEECCeEEEEEeCCCCCCCCCEEE
Confidence 7799999999999999999987 38999999999887765444445677889999999999999997 99999999999
Q ss_pred EeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcC--CCcEEEcCCCCCcC
Q 009940 336 LHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNL 392 (522)
Q Consensus 336 ~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l--~~~~ivPgHG~~~~ 392 (522)
++++.++||+||+++....+.....+.++..+|++|+++++++ +.+.++||||++..
T Consensus 153 ~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 211 (232)
T 1a7t_A 153 WLPTENILFGGCMLKDNQTTSIGNISDADVTAWPKTLDKVKAKFPSARYVVPGHGNYGG 211 (232)
T ss_dssp EETTTTEEEEETTSCCTTCCSCCCCTTCCTTTHHHHHHHHHHHCTTCSEEEESSSCCBC
T ss_pred EECCCCEEEEcCcccccCCcccccCCCCCHHHHHHHHHHHHhhCCCCCEEECCCCCccc
Confidence 9998999999999875433333333567889999999999987 78899999999874
No 10
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.96 E-value=4.1e-28 Score=240.71 Aligned_cols=222 Identities=13% Similarity=0.117 Sum_probs=157.7
Q ss_pred cCCCCCccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEe-cCCeEEEcCCCCChHHHHHHHHHHh-
Q 009940 176 WKVPPTLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVA-QGEALIVDPGCRSEFHEELLKVVAS- 253 (522)
Q Consensus 176 ~~~~~~~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~-~g~~iLIDtG~~~~~~~~L~~~~~~- 253 (522)
|..+..+.+.+++||||++........-|. +.| ....|..+|+|++ +++.+|||||... ..+.+.+.+++
T Consensus 3 ~~~~~~~~~~~i~~~vy~v~~~~~~~~~f~--~~~-----~~~~g~~~N~yli~~~~~iLID~G~~~-~~~~~~~~l~~~ 74 (262)
T 3hnn_A 3 DSKPRDVQVLPIATNTKVLRARSWSRLRFE--IEY-----ALERGTTSNSYVIEGDKTAIIDPPVES-FMKIYLEALQQT 74 (262)
T ss_dssp -CCSCEEEEEEEETTEEEEEEEESSCSSSS--GGG-----TTCCCEEEEEEEEESSSEEEECCCCHH-HHHHHHHHHHHH
T ss_pred CCccccceeEeecCCeEEEEEeeCCcccee--eee-----ccCCCcEEEEEEEECCCEEEEECCCcc-hHHHHHHHHHHh
Confidence 345567888999999999976433222221 111 0112344455555 3468999999763 22334333333
Q ss_pred --CCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCC--CCCCceecCCCceEEEC-CEEEEEEeCCC-
Q 009940 254 --LPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD--WSLGYTSVSGSEDICVG-GQRLTVVFSPG- 327 (522)
Q Consensus 254 --~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~--~~~~~~~l~~g~~l~lg-g~~l~vi~tPG- 327 (522)
..++++|++||.|+||+||+..+++.+|+++||+++.+...+.... .......+.+|+++++| +.+++++++||
T Consensus 75 ~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~g~~l~lg~~~~~~~i~tpg~ 154 (262)
T 3hnn_A 75 VNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLRAAFPDDNLNILPMRGKETLDLGKGHVLKFLPIPSP 154 (262)
T ss_dssp SCGGGEEEEECSSCCGGGHHHHHHHHHHCTTCEEEECHHHHHHHHHHSSSSCCEEEECCSSCEEECSTTCEEEEEECCCS
T ss_pred CChhhCCEEEECCCCcchhchHHHHHHHCCCCEEEECHHHHHHHHHHhCCCCCceEEeCCCCEEEcCCCcEEEEEECCCC
Confidence 2457799999999999999999999999999999999887764321 12346778999999998 89999999999
Q ss_pred CCCCCeEEEeCCCCEEEEcccccCCCCcc--ccc---------------CCCCCHHHHHHHHHHHhcCCCcEEEcCCCCC
Q 009940 328 HTDGHVALLHASTNSLIVGDHCVGQGSAV--LDI---------------TAGGNMTDYFQSTYKFLELSPHALIPMHGRV 390 (522)
Q Consensus 328 HT~g~i~l~~~~~~vLftGD~l~~~~~~~--~~~---------------~~~~~~~~~~~SL~~l~~l~~~~ivPgHG~~ 390 (522)
||+|+++++.++.++||+||++....... +.. ....+..++.+|++++.++++++|+||||++
T Consensus 155 Ht~g~~~~~~~~~~~lfsGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~L~~~~i~PgHG~~ 234 (262)
T 3hnn_A 155 RWPAGLCTYDVQTQILYTDKIFGAHICGDDVFDDNWESFKEDQRYYFNCLMAPHAIHVEAALEKISDLQVRLYAVGHGPL 234 (262)
T ss_dssp SCTTCEEEEETTTTEEEEETTTCCCCCCSCCEESCGGGTHHHHHHHHHHHTGGGHHHHHHHHHHHTTSCCSEEEESSSSE
T ss_pred CCCCeeEEEeCCCCEEEEeecCccccCchhcccccHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhCCCCCEEECCCCcc
Confidence 99999999999999999999954332211 100 0112357889999999999999999999999
Q ss_pred cC-ChHHHHHHHHHHH
Q 009940 391 NL-WPKHMLCGYLKNR 405 (522)
Q Consensus 391 ~~-~~~~~i~~~l~~~ 405 (522)
+. +..+.++.|++..
T Consensus 235 ~~~~~~~~~~~y~~w~ 250 (262)
T 3hnn_A 235 VRTSLIALTQAYADWS 250 (262)
T ss_dssp ESTTHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHh
Confidence 86 3445555555443
No 11
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.96 E-value=8.6e-28 Score=237.87 Aligned_cols=217 Identities=15% Similarity=0.209 Sum_probs=162.9
Q ss_pred CCCccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhCC---
Q 009940 179 PPTLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLP--- 255 (522)
Q Consensus 179 ~~~~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~~--- 255 (522)
...+...++.+|+|.++. ...|+|++..+ ++.+|||||.... ...+.+.+++.+
T Consensus 5 ~~~~~~~~i~~~v~~i~~--------~~~n~~li~~~--------------~~~iLID~G~~~~-~~~l~~~l~~~g~~~ 61 (263)
T 1k07_A 5 PNPFPPFRIAGNLYYVGT--------DDLASYLIVTP--------------RGNILINSDLEAN-VPMIKASIKKLGFKF 61 (263)
T ss_dssp CCBCCCEEEETTEEECCB--------SSBCCEEEEET--------------TEEEEECCCCGGG-HHHHHHHHHHTTCCG
T ss_pred cCCcCCeEEECCEEEECC--------CCeEEEEEEeC--------------CceEEEECCCccc-HHHHHHHHHHcCCCH
Confidence 345667889999999832 23466666543 4689999998632 345555555554
Q ss_pred -CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCC-------------CC--CCceecCCCceEEECCEE
Q 009940 256 -RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD-------------WS--LGYTSVSGSEDICVGGQR 319 (522)
Q Consensus 256 -~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~-------------~~--~~~~~l~~g~~l~lgg~~ 319 (522)
++++||+||.|.||+||+..|++.+ +++||+++.+...+.... +. .....+.+|+.+.+|+.+
T Consensus 62 ~~i~~IilTH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~ 140 (263)
T 1k07_A 62 SDTKILLISHAHFDHAAGSELIKQQT-KAKYMVMDEDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELGGTV 140 (263)
T ss_dssp GGEEEEECSSSSHHHHTTHHHHHHHH-CCEEEEEHHHHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEETTEE
T ss_pred HHCcEEEeCCCCccccccHHHHHHhc-CCEEEEcHHHHHHHhcccccccccCccccccCCCCCcceEeCCCCEEEECCeE
Confidence 4679999999999999999998874 899999999887764321 10 134568899999999999
Q ss_pred EEEEeCCCCCCCCeEEEeCC---C---CEEEEcccccCCCCccccc-CCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCcC
Q 009940 320 LTVVFSPGHTDGHVALLHAS---T---NSLIVGDHCVGQGSAVLDI-TAGGNMTDYFQSTYKFLELSPHALIPMHGRVNL 392 (522)
Q Consensus 320 l~vi~tPGHT~g~i~l~~~~---~---~vLftGD~l~~~~~~~~~~-~~~~~~~~~~~SL~~l~~l~~~~ivPgHG~~~~ 392 (522)
++++++||||+||++++++. + ++||+||+.........+. ....+..+|++|++++.++++++++||||++..
T Consensus 141 i~~i~~pGHt~g~~~~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~i~pgHg~~~~ 220 (263)
T 1k07_A 141 LTAHLTPGHTRGCTTWTMKLKDHGKQYQAVIIGSIGVNPGYKLVDNITYPKIAEDYKHSIKVLESMRCDIFLGSHAGMFD 220 (263)
T ss_dssp EEEEECCSSSTTCEEEEEEEEETTEEEEEEEECCCCCCTTCCCSSCSSCTTHHHHHHHHHHHHHTBCCSEEEESBHHHHT
T ss_pred EEEEECCCCCCCcEEEEEecccCCceeEEEEECCcccCCCccccCCCcCcccHHHHHHHHHHHHccCCCEEEcCCCcccc
Confidence 99999999999999999874 2 6999999865222221111 133578999999999999999999999999765
Q ss_pred ChHHH-------------HHHHHHHHHHHHHHHHHHHHcC
Q 009940 393 WPKHM-------------LCGYLKNRRAREAAILQAIENG 419 (522)
Q Consensus 393 ~~~~~-------------i~~~l~~~~~r~~~il~~l~~g 419 (522)
...+. ..++.++..++++++++.++++
T Consensus 221 ~~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~~~~l~~~ 260 (263)
T 1k07_A 221 LKNKYVLLSKGQNNPFVDPTGCKNYIEQKANDFYTELKKQ 260 (263)
T ss_dssp HHHHHHHHHTTCSCTTBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhcccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 33321 2378889999999999998764
No 12
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.95 E-value=1.2e-27 Score=231.65 Aligned_cols=198 Identities=18% Similarity=0.246 Sum_probs=149.8
Q ss_pred CCCccceecCCeEEEEeccCC-CCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHh--CC
Q 009940 179 PPTLSYQEYPPGVILVPMQSR-TAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVAS--LP 255 (522)
Q Consensus 179 ~~~~~~~evapGv~~v~~~~~-~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~--~~ 255 (522)
...+..+++++|||++..... ...+ ...|+|++.. +++.+|||||........+.+.+++ ..
T Consensus 13 ~~~~~~~~i~~~v~~~~~~~~~~~~~-~~~n~~li~~--------------~~~~iliD~G~~~~~~~~~~~~l~~~~~~ 77 (227)
T 1mqo_A 13 TGTISISQLNKNVWVHTELGSFNGEA-VPSNGLVLNT--------------SKGLVLVDSSWDDKLTKELIEMVEKKFQK 77 (227)
T ss_dssp SSSEEEEEEETTEEEEEEEEEETTEE-EEEEEEEEEE--------------TTEEEEESCCSSHHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEEecCCeEEEEeeecccCce-ecceEEEEEe--------------CCeEEEEECCCChHHHHHHHHHHHHhcCC
Confidence 346778899999999853210 0000 1234444433 2558999999876433344444443 45
Q ss_pred CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecCCCceEEECCEEEEEE-eCCCCCCCCeE
Q 009940 256 RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVV-FSPGHTDGHVA 334 (522)
Q Consensus 256 ~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~~g~~l~lgg~~l~vi-~tPGHT~g~i~ 334 (522)
++++|++||.|+||+||+..+.+. +++|++++.+...+....+..+...+.+|+.+.+|+.+++++ ++||||+|+++
T Consensus 78 ~i~~ii~TH~H~DH~gg~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~pgHt~g~~~ 155 (227)
T 1mqo_A 78 RVTDVIITHAHADRIGGIKTLKER--GIKAHSTALTAELAKKNGYEEPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIV 155 (227)
T ss_dssp CEEEEECCCCSHHHHTTHHHHHHH--TCEEECBHHHHHHHHHTTCCCCCCCBCSEEEEEETTEEEEEECCCCSSSSSCCE
T ss_pred CceEEEeCCCCchhccchHHHhhC--CcEEEeccchHHHHHhcCCCCCccccCCCCeeeECCEEEEEEecCCCCCCCCEE
Confidence 778999999999999999999887 899999998887776544444456678899999999999998 69999999999
Q ss_pred EEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcC--CCcEEEcCCCCCcCC
Q 009940 335 LLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNLW 393 (522)
Q Consensus 335 l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l--~~~~ivPgHG~~~~~ 393 (522)
+++++.++||+||+++....+.+...+..+..+|++|+++++++ +++.++||||++..+
T Consensus 156 ~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~~ 216 (227)
T 1mqo_A 156 VWLPQYNILVGGCLVKSTSAKDLGNVADAYVNEWSTSIENVLKRYRNINAVVPGHGEVGDK 216 (227)
T ss_dssp EEETTTTEEEEETTSCCTTCCSCCCCTTCCHHHHHHHHHHHHHHCCSCSEEEESSSCCBCT
T ss_pred EEECCCCEEEEeeeeeccCccccCcCCCCCHHHHHHHHHHHHHhcCCCCEEEcCCCCcccc
Confidence 99998899999999875443333333567899999999999986 788999999998754
No 13
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.95 E-value=2.7e-27 Score=231.46 Aligned_cols=202 Identities=18% Similarity=0.201 Sum_probs=148.5
Q ss_pred CCccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhC-CC-c
Q 009940 180 PTLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL-PR-K 257 (522)
Q Consensus 180 ~~~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~-~~-i 257 (522)
..+..+++++|||++.... |+ ..|+|++..++ ++.+|||||......+.+.+.+++. +. .
T Consensus 8 ~~~~~~~i~~~v~~i~~~~----~~-~~n~~li~~~~-------------~~~iLiD~G~~~~~~~~l~~~l~~~~~~~~ 69 (246)
T 2fhx_A 8 YNLTATKIDSDVFVVTDRD----FY-SSNVLVAKMLD-------------GTVVIVSSPFENLGTQTLMDWVAKTMKPKK 69 (246)
T ss_dssp TTEEEEEEETTEEEEEETT----TT-TEEEEEEECTT-------------SEEEEESCCSSHHHHHHHHHHHHHHHCCSE
T ss_pred CCceEEEecCCEEEEECcC----CC-CCCEEEEEeCC-------------CeEEEEeCCCCHHHHHHHHHHHHHhcCCCc
Confidence 4567889999999996531 22 24666665321 3589999998754444454444432 22 2
Q ss_pred cEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC-------------------------CCCC-CceecCCCc
Q 009940 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-------------------------DWSL-GYTSVSGSE 311 (522)
Q Consensus 258 ~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~-------------------------~~~~-~~~~l~~g~ 311 (522)
.+||+||.|.||+||+..|++ + +++||+++.+.+.+... ..+. ....+.+|+
T Consensus 70 ~~vi~TH~H~DH~gg~~~l~~-~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 147 (246)
T 2fhx_A 70 VVAINTHFHLDGTGGNEIYKK-M-GAETWSSDLTKQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGK 147 (246)
T ss_dssp EEEECCSSSHHHHTTHHHHHH-T-TCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCE
T ss_pred EEEEeCCCCccccChHHHHhh-c-CCEEEEcHHHHHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCC
Confidence 379999999999999999987 4 89999998876654210 0111 123578899
Q ss_pred eEEECCEEEEEEe-CCCCCCCCeEEEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCC
Q 009940 312 DICVGGQRLTVVF-SPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLELSPHALIPMHGRV 390 (522)
Q Consensus 312 ~l~lgg~~l~vi~-tPGHT~g~i~l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l~~~~ivPgHG~~ 390 (522)
++++||.++++++ +||||+||+++++++.++||+||+++....+. .+..+..+|++|++++.+++++.++||||++
T Consensus 148 ~l~~g~~~i~~~~~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~---~~~~~~~~~~~sl~~l~~l~~~~i~pgHg~~ 224 (246)
T 2fhx_A 148 VFSFSNELVEVSFPGPAHSPDNVVVYFPKKKLLFGGCMIKPKELGY---LGDANVKAWPDSARRLKKFDAKIVIPGHGEW 224 (246)
T ss_dssp EEEETTEEEEEECCCCSSSTTCCEEEETTTTEEEEETTCCSSCCCC---CTTCCTTTHHHHHHHGGGSCCSEEEESBSCC
T ss_pred EEEECCEEEEEEeCCCCCCCCCEEEEEcCCCEEEECCEeccCCCCC---CCCCCHHHHHHHHHHHHhCCCCEEECCCCCc
Confidence 9999999999996 99999999999999899999999988644332 2456889999999999999999999999998
Q ss_pred cCChHHHHHHHHHHHH
Q 009940 391 NLWPKHMLCGYLKNRR 406 (522)
Q Consensus 391 ~~~~~~~i~~~l~~~~ 406 (522)
+. .+.++++++..+
T Consensus 225 ~~--~~~l~~~~~~l~ 238 (246)
T 2fhx_A 225 GG--PEMVNKTIKVAE 238 (246)
T ss_dssp BS--THHHHHHHHHHH
T ss_pred CC--HHHHHHHHHHHH
Confidence 75 344444444433
No 14
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.95 E-value=1.4e-27 Score=237.31 Aligned_cols=195 Identities=14% Similarity=0.165 Sum_probs=143.6
Q ss_pred CCccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhC-C-Cc
Q 009940 180 PTLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL-P-RK 257 (522)
Q Consensus 180 ~~~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~-~-~i 257 (522)
+.+.++++.+|+|.++.......+....|+|++..+ ++.+|||||.+......+.+.+++. + ++
T Consensus 41 g~~~~~~l~dgv~~~~~~~~~~~~~~~~n~~li~~~--------------~~~iLID~G~~~~~~~~l~~~l~~~~g~~i 106 (265)
T 2y8b_A 41 GEVRLYKIGDGVWSHIATQKLGDTVYSSNGLIVRDA--------------DELLLIDTAWGAKNTVALLAEIEKQIGLPV 106 (265)
T ss_dssp TCCEEEEEETTEEEEEEEEEETTEEEEEEEEEEEET--------------TEEEEESCCSSHHHHHHHHHHHHHHTCSCE
T ss_pred CCceEEEecCCeEEEeccccCCCCcccceEEEEEEC--------------CeEEEEeCCCCHHHHHHHHHHHHHhcCCCe
Confidence 467888999999998542110001112344444432 4589999998754445555555544 4 57
Q ss_pred cEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceec----CCCceEEECCEEEEE-EeCCCCCCCC
Q 009940 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSV----SGSEDICVGGQRLTV-VFSPGHTDGH 332 (522)
Q Consensus 258 ~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l----~~g~~l~lgg~~l~v-i~tPGHT~g~ 332 (522)
++|++||.|.||+||+..+.+. +++||+++.+.+.+...........+ ++|+.+.+|+ +++ +++||||+||
T Consensus 107 ~~VilTH~H~DH~gg~~~~~~~--~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~v~~~~pGHt~g~ 182 (265)
T 2y8b_A 107 TRSISTHFHDDRVGGVDVLRAA--GVATYTSPLTRQLAEAAGNEVPAHSLKALSSSGDVVRFGP--VEVFYPGAAHSGDN 182 (265)
T ss_dssp EEEECSSSSHHHHTTHHHHHHT--TCEEEECHHHHHHHHHTTCCCCSEECSSCSSTTEEEEETT--EEEEECCSSSSTTC
T ss_pred EEEEeCCCChhhcCCHHHHhhC--CCeEEECHHHHHHHHhcccccccccccccCCCCcEEeecC--EEEEecCCCCCCCC
Confidence 7999999999999999998873 89999999998877543221111222 6788898887 666 7899999999
Q ss_pred eEEEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcC--CCcEEEcCCCCCcC
Q 009940 333 VALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNL 392 (522)
Q Consensus 333 i~l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l--~~~~ivPgHG~~~~ 392 (522)
++++++++++||+||+++....+........+..+|.+|++++.++ +.++++||||++..
T Consensus 183 ~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 244 (265)
T 2y8b_A 183 LVVYVPAVRVLFGGCAVHEASRESAGNVADANLAEWPATIKRIQQRYPEAEVVIPGHGLPGG 244 (265)
T ss_dssp CEEEETTTTEEEEETTSCCTTCCSCCCCTTCCTTTHHHHHHHHHHHCTTCSEEEESSSCCBC
T ss_pred EEEEecCCCEEEEccccccCCCcccCcCCcCCHHHHHHHHHHHHhhCCCCCEEECCCCCCCC
Confidence 9999998899999999986543333333457889999999999987 77899999999874
No 15
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.95 E-value=3.3e-27 Score=227.74 Aligned_cols=187 Identities=17% Similarity=0.219 Sum_probs=144.3
Q ss_pred CccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhCC--Ccc
Q 009940 181 TLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLP--RKL 258 (522)
Q Consensus 181 ~~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~~--~i~ 258 (522)
.++++++.+|+|+++.. .+...|+|++..+ ++.+|||||......+.+.+.+++.+ +++
T Consensus 2 ~~~~~~l~~~v~~~~~~-----~~~~~n~~li~~~--------------~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~ 62 (227)
T 3iog_A 2 GMSLTQVSGPVYVVEDN-----YYVQENSMVYFGA--------------KGVTVVGATWTPDTARELHKLIKRVSRKPVL 62 (227)
T ss_dssp CEEEEEEETTEEEEEEC-----SSSCEEEEEEECS--------------SCEEEESCCSSHHHHHHHHHHHHTTCCSCEE
T ss_pred CcccEEecCCEEEEECC-----CcccCcEEEEEeC--------------CeEEEEECCCChHHHHHHHHHHHHhcCCCeE
Confidence 35678999999999632 2334577776653 56899999987665667777777654 567
Q ss_pred EEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC-------------CC-----CCCceecCCCceEEECCEEE
Q 009940 259 IVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-------------DW-----SLGYTSVSGSEDICVGGQRL 320 (522)
Q Consensus 259 ~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~-------------~~-----~~~~~~l~~g~~l~lgg~~l 320 (522)
+||+||.|.||+||+..|++ ++++||+++.+...+... .+ ..+...+ ++ .+.+++.++
T Consensus 63 ~ii~TH~H~DH~gg~~~l~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~l~~~~~ 138 (227)
T 3iog_A 63 EVINTNYHTDRAGGNAYWKS--IGAKVVSTRQTRDLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVH-DG-DFTLQEGKV 138 (227)
T ss_dssp EEECSSSSHHHHTTHHHHHH--TTCEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSCCCCCCCCSEEE-SS-CEEETTTTE
T ss_pred EEEeCCCchhhcChHHHHhh--CCCeEEECHHHHHHHHHhhHHHHHHhhcCCCCCCCccccCCCEee-cC-eEEEcCcEE
Confidence 99999999999999999986 699999999887655321 11 1112223 34 478888889
Q ss_pred EEEeC-CCCCCCCeEEEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHh--cCCCcEEEcCCCCCcCCh
Q 009940 321 TVVFS-PGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFL--ELSPHALIPMHGRVNLWP 394 (522)
Q Consensus 321 ~vi~t-PGHT~g~i~l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~--~l~~~~ivPgHG~~~~~~ 394 (522)
+++++ ||||+||++++++++++|| ||.++....+.. ...+..+|++|+++|. .+++++|+||||.++.+.
T Consensus 139 ~~~~~~pGHt~g~~~~~~~~~~~lf-gd~l~~~~~~~~---~~~~~~~~~~sl~~l~~~~l~~~~i~pgHg~~~~~~ 211 (227)
T 3iog_A 139 RAFYAGPAHTPDGIFVYFPDEQVLY-GGCILKEKLGNL---SFADVKAYPQTLERLKAMKLPIKTVIGGHDSPLHGP 211 (227)
T ss_dssp EEECCCCSSSSSCCEEEETTTTEEE-CGGGSCSSCCCC---TTCCTTHHHHHHHHHHHTCCCCSEEECSSSCCEECT
T ss_pred EEEecCCCCCCCcEEEEecCCCEEE-cccccccCCCCc---CcCCHHHHHHHHHHHHhccCCCCEEEeCCCCCcCCH
Confidence 99997 9999999999999999999 888876654443 3468899999999999 688999999999988654
No 16
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.95 E-value=3.7e-27 Score=228.24 Aligned_cols=187 Identities=18% Similarity=0.193 Sum_probs=144.2
Q ss_pred CccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhC--CCcc
Q 009940 181 TLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL--PRKL 258 (522)
Q Consensus 181 ~~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~--~~i~ 258 (522)
.+.++++++|+|+++.. ++...|+|++..+ ++.+|||||......+.+.+.++++ .+++
T Consensus 5 ~~~~~~l~~~v~~i~~~-----~~~~~n~~li~~~--------------~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~ 65 (233)
T 3q6v_A 5 NLTLTHFKGPLYIVEDK-----EYVQENSMVYIGT--------------DGITIIGATWTPETAETLYKEIRKVSPLPIN 65 (233)
T ss_dssp CEEEEEEETTEEEEEEC-----SSSCEEEEEEECS--------------SCEEEESCCSSHHHHHHHHHHHHHHCCCCEE
T ss_pred cceeEEecCCEEEEeCC-----CcCCCcEEEEEeC--------------CeEEEEECCCCHHHHHHHHHHHHHhcCCCcE
Confidence 56778999999999632 2334577666643 5689999998875555666666553 4577
Q ss_pred EEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC------------------CCCCCceecCCCceEEECCEEE
Q 009940 259 IVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD------------------DWSLGYTSVSGSEDICVGGQRL 320 (522)
Q Consensus 259 ~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~------------------~~~~~~~~l~~g~~l~lgg~~l 320 (522)
+|++||.|+||+||+..|++ ++++||+++.+...+... ....+...+.++..+..+ .+
T Consensus 66 ~ii~TH~H~DH~gg~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 141 (233)
T 3q6v_A 66 EVINTNYHTDRAGGNAYWKT--LGAKIVATQMTYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGDFNLQNG--SI 141 (233)
T ss_dssp EEECSSSSHHHHTTHHHHHH--TTCEEEEEHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCSEEESSCEEETTT--TE
T ss_pred EEEECCCChhhhChHHHHhh--CCCEEEEcHHHHHHHHhhhHHHHHHHhccccccccccccCCCEEeCCCeEEcCc--eE
Confidence 99999999999999999984 699999999887665321 111233456666655444 58
Q ss_pred EEEeC-CCCCCCCeEEEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcC------CCcEEEcCCCCCcCC
Q 009940 321 TVVFS-PGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL------SPHALIPMHGRVNLW 393 (522)
Q Consensus 321 ~vi~t-PGHT~g~i~l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l------~~~~ivPgHG~~~~~ 393 (522)
+++++ ||||+||+++++++.++|| ||.++....+.. +..+..+|.+|++++.++ ++++|+||||+++.+
T Consensus 142 ~v~~~~pGHt~g~~~~~~~~~~~lf-gD~~~~~~~~~~---~~~~~~~~~~sl~~l~~l~~~~~~~~~~i~pgHg~~~~~ 217 (233)
T 3q6v_A 142 RAMYLGEAHTKDGIFVYFPAERVLY-GNCILKENLGNM---SFANRTEYPKTLEKLKGLIEQGELKVDSIIAGHDTPIHD 217 (233)
T ss_dssp EEECCCCSSSSSCCEEEETTTTEEE-CTTTSCSSCCCC---TTCCTTHHHHHHHHHHHHHHTTSSCCSEEECSSSSSEEC
T ss_pred EEEECCCCCCcCcEEEEeccCCEEE-CceeccccCCCC---CcCCHHHHHHHHHHHHHhhhcccCCCeEEECCCCCccCC
Confidence 89998 9999999999999999999 999887654432 456899999999999998 999999999998765
Q ss_pred h
Q 009940 394 P 394 (522)
Q Consensus 394 ~ 394 (522)
.
T Consensus 218 ~ 218 (233)
T 3q6v_A 218 V 218 (233)
T ss_dssp T
T ss_pred H
Confidence 3
No 17
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.95 E-value=2.1e-27 Score=232.43 Aligned_cols=196 Identities=15% Similarity=0.190 Sum_probs=147.7
Q ss_pred CCccceecCCeEEEEecc-CCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhC-C-C
Q 009940 180 PTLSYQEYPPGVILVPMQ-SRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL-P-R 256 (522)
Q Consensus 180 ~~~~~~evapGv~~v~~~-~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~-~-~ 256 (522)
+.+.+++++||+|++... ...+.+....|+|++..+ ++.+|||||........+.+.+++. + +
T Consensus 20 ~~~~~~~i~~~v~~~~~~~~~~~~g~~~~n~~li~~~--------------~~~iLID~G~~~~~~~~l~~~l~~~~~~~ 85 (243)
T 4hl2_A 20 GDLVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDG--------------GRVLVVDTAWTDDQTAQILNWIKQEINLP 85 (243)
T ss_dssp TTEEEEEEETTEEEEEEEEEETTTEEEEEEEEEEEET--------------TEEEEESCCSSHHHHHHHHHHHHHHTCCC
T ss_pred cceEEEEeCCceEEEeeecccCCCCcccceEEEEEEC--------------CcEEEEECCCCCccHHHHHHHHHHhhCCC
Confidence 467889999999998431 111112223455555432 4589999997655455666665553 3 4
Q ss_pred ccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCC--------CCceecCCCceEEECCEEEEEEeCCCC
Q 009940 257 KLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWS--------LGYTSVSGSEDICVGGQRLTVVFSPGH 328 (522)
Q Consensus 257 i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~--------~~~~~l~~g~~l~lgg~~l~vi~tPGH 328 (522)
+++|++||.|.||+||+..|++. +++||+++.+...+...... .....+.+|+.+.+|+.++ ++++|||
T Consensus 86 i~~vi~TH~H~DH~gg~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v-~~~~pGH 162 (243)
T 4hl2_A 86 VALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLKV-FYPGPGH 162 (243)
T ss_dssp EEEEEECSSSHHHHTTHHHHHHT--TCEEEEEHHHHHHGGGTTCCCCSEEECBCTTSBBCGGGSTTCTTEEE-ECCCSSS
T ss_pred eeEEEECCCCccccCCHHHHHhC--CCeEEECHHHHHHHhcccccccccccccccceEecCCCeEEECCEEE-EeCCCCC
Confidence 67999999999999999999885 89999999998887654321 1234467899999999888 6799999
Q ss_pred CCCCeEEEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhc-C-CCcEEEcCCCCCcC
Q 009940 329 TDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLE-L-SPHALIPMHGRVNL 392 (522)
Q Consensus 329 T~g~i~l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~-l-~~~~ivPgHG~~~~ 392 (522)
|+|++++++++.++||+||+++....+.....+.++..+|++|++++.. + +..+++||||++..
T Consensus 163 t~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~~l~~~~~v~pgHg~~~~ 228 (243)
T 4hl2_A 163 TSDNITVGIDGTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDS 228 (243)
T ss_dssp STTCCEEEETTTTEEECTTTCCCTTCSCCCCCTTCCTTTHHHHHHHHHHHSTTCCEEECSSSCCBC
T ss_pred CcCCEEEEEcCCCEEEEcceeeeccCCCcCCCCCCCHHHHHHHHHHHHhhCCCceEEEeCCCCcCc
Confidence 9999999999999999999998543333333357789999999999986 4 57799999999874
No 18
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.95 E-value=6.4e-27 Score=226.99 Aligned_cols=194 Identities=18% Similarity=0.192 Sum_probs=145.2
Q ss_pred CCccceecCCeEEEEeccCCC-CCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhCC-Cc
Q 009940 180 PTLSYQEYPPGVILVPMQSRT-AKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLP-RK 257 (522)
Q Consensus 180 ~~~~~~evapGv~~v~~~~~~-~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~~-~i 257 (522)
+.++.+++.+|+|++...... +......|+|++..+ ++.+|||||......+.+.+.+++.+ ++
T Consensus 5 ~~~~~~~i~~~v~~~~~~~~~~g~~~~~~n~~li~~~--------------~~~iliD~g~~~~~~~~~~~~l~~~g~~i 70 (228)
T 1jjt_A 5 PDLKIEKLDEGVYVHTSFEEVNGWGVVPKHGLVVLVN--------------AEAYLIDTPFTAKDTEKLVTWFVERGYKI 70 (228)
T ss_dssp CCCEEEEEETTEEEEEEEEECTTSCEEEEEEEEEEET--------------TEEEEESCCSSHHHHHHHHHHHHTTTCEE
T ss_pred CCceEEEecCCeEEEEeecccCCCccccceEEEEEEC--------------CcEEEEeCCCChhhHHHHHHHHHHcCCCe
Confidence 467788999999998642100 001112344444332 45899999987544456666666665 46
Q ss_pred cEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecCCCceEEECCEEEEEE-eCCCCCCCCeEEE
Q 009940 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVV-FSPGHTDGHVALL 336 (522)
Q Consensus 258 ~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~~g~~l~lgg~~l~vi-~tPGHT~g~i~l~ 336 (522)
++|++||.|.||+||+..+++. +++||+++.+.+.+.......+...+ .|+.+.+++.+++++ ++||||+||++++
T Consensus 71 ~~ii~TH~H~DH~gg~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~-~g~~~~l~~~~i~~~~~~pGHt~g~~~~~ 147 (228)
T 1jjt_A 71 KGSISSHFHSDSTGGIEWLNSR--SIPTYASELTNELLKKDGKVQATNSF-SGVNYWLVKNKIEVFYPGPGHTPDNVVVW 147 (228)
T ss_dssp EEEECSSSSHHHHTTHHHHHHT--TCCEEEEHHHHHHHHHTTCCCCSEEE-CSSCCEEETTTEEEECCCCSSSTTCCEEE
T ss_pred eEEEeCCCChhhhccHHHHHhC--CCEEEEChHHHHHHHhcCCcCccccc-cCcceEecCceEEEEecCCCCCCCcEEEE
Confidence 7999999999999999999873 89999999998877654322222233 366778888889998 8999999999999
Q ss_pred eCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcC--CCcEEEcCCCCCcCC
Q 009940 337 HASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNLW 393 (522)
Q Consensus 337 ~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l--~~~~ivPgHG~~~~~ 393 (522)
++++++||+||+++....+.. ...+..+|++|+++++++ ++++++||||++...
T Consensus 148 ~~~~~~lf~GD~~~~~~~~~~---~~~d~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~~ 203 (228)
T 1jjt_A 148 LPERKILFGGCFIKPYGLGNL---GDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDA 203 (228)
T ss_dssp ETTTTEEEEETTCCTTCCCCC---TTCCTTTHHHHHHHHHHHTTTCSEEEESSSCCBCT
T ss_pred ECCCcEEEEeccccccccCcc---CccCHHHHHHHHHHHHhhcCCCCEEEcCCCCcCCH
Confidence 998899999999875543322 356889999999999987 889999999998753
No 19
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.94 E-value=3.1e-26 Score=227.04 Aligned_cols=175 Identities=26% Similarity=0.308 Sum_probs=135.5
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCC-CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecC
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVS 308 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~-~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~ 308 (522)
++.+|||||... .+.+.+++.+ ++++|++||.|.||+||+..+++.+++++||+++.+. + +.....+.
T Consensus 29 ~~~vlID~G~~~----~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~--~-----~~~~~~~~ 97 (258)
T 2qed_A 29 GRCVIVDPGEAA----PVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAETQ--D-----KGATHLVG 97 (258)
T ss_dssp SEEEEECCSCHH----HHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHCTTCEEEECGGGG--G-----GTCSEECC
T ss_pred CcEEEEeCCCcH----HHHHHHHHcCCCCCEEEeCCCCccccCCHHHHHHHCCCCEEEeccccc--C-----CCCcEEeC
Confidence 458999999643 2333333333 5679999999999999999999998779999998763 1 12456788
Q ss_pred CCceEEECCEEEEEEeCCCCCCCCeEEEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcCCCc-EEEcCC
Q 009940 309 GSEDICVGGQRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLELSPH-ALIPMH 387 (522)
Q Consensus 309 ~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l~~~-~ivPgH 387 (522)
+|+.+.+|+.+++++++||||+||++++ +.+++|+||+++..+.+.. +.++..+|++|++++.+++.+ .|+|||
T Consensus 98 ~g~~~~~g~~~~~vi~tPGHt~g~~~~~--~~~~lftGD~l~~~~~g~~---~~~~~~~~~~sl~~l~~l~~~~~v~pgH 172 (258)
T 2qed_A 98 DGDTIRVLGEKFTLFATPGHTLGHVCYF--SRPYLFCGDTLFSGGCGRL---FEGTPSQMYQSLMKINSLPDDTLICCAH 172 (258)
T ss_dssp TTCEEEETTEEEEEEECCSSSTTCEEEE--ETTEEEEETTEETTEECCC---SSSCHHHHHHHHHHHHTSCTTCEEEESB
T ss_pred CCCEEEECCcEEEEEECCCCCCCCeEEE--cCCEEEECCCCCCCCcCCC---CCCCHHHHHHHHHHHHcCCCCeEEECCC
Confidence 9999999999999999999999999999 5789999999987654433 467899999999999999988 689999
Q ss_pred CCCcCChHH--HHHHHHHHHHHHHHHHHHHHHcCC
Q 009940 388 GRVNLWPKH--MLCGYLKNRRAREAAILQAIENGV 420 (522)
Q Consensus 388 G~~~~~~~~--~i~~~l~~~~~r~~~il~~l~~g~ 420 (522)
|++..+... .++...++..++.+++.+..++|.
T Consensus 173 g~~~~~~~f~~~~~p~~~~l~~~~~~v~~~~~~g~ 207 (258)
T 2qed_A 173 EYTLANIKFALSILPHDSFINEYYRKVKELRVKKQ 207 (258)
T ss_dssp CCHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHTTC
T ss_pred cchhhchhHhhhcCcccHHHHHHHHHHHHHHHcCC
Confidence 986543221 122223566667777877777764
No 20
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.94 E-value=3.1e-26 Score=226.55 Aligned_cols=151 Identities=20% Similarity=0.277 Sum_probs=123.7
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCC-CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecC
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVS 308 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~-~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~ 308 (522)
++.+|||||... .+.+.+++.+ ++++|++||.|+||+||+..|++.+ +++||+++.+...+.. ....+.
T Consensus 23 ~~~~lID~g~~~----~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~~~~-----~~~~~~ 92 (254)
T 1xm8_A 23 GTVGVVDPSEAE----PIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRY-GAKVIGSAMDKDRIPG-----IDMALK 92 (254)
T ss_dssp CCEEEECCSSHH----HHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHH-CCEEEEEGGGGGGSTT-----EEEEEC
T ss_pred CEEEEEeCCCHH----HHHHHHHHcCCCccEEEECCCCCcccccHHHHHHHc-CCeEEEchhhhhcCCC-----CceeeC
Confidence 358999999533 2333333333 5779999999999999999999877 7999999987765532 246788
Q ss_pred CCceEEECCEEEEEEeCCCCCCCCeEEEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcCCCc-EEEcCC
Q 009940 309 GSEDICVGGQRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLELSPH-ALIPMH 387 (522)
Q Consensus 309 ~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l~~~-~ivPgH 387 (522)
+|+.+.+|+.+++++++||||+||+++++++.+++|+||+++..+.+. .+.++..+|++|++++.+++.+ .|+|||
T Consensus 93 ~g~~~~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~l~~~~~g~---~~~~~~~~~~~Sl~~l~~l~~~~~v~pgH 169 (254)
T 1xm8_A 93 DGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSCGK---LFEGTPKQMLASLQKITSLPDDTSIYCGH 169 (254)
T ss_dssp TTCEEEETTEEEEEEECCSSSSSCEEEEEGGGTEEEEETTEETTEECC---CSSSCHHHHHHHHHHHHTSCTTCEEEESB
T ss_pred CCCEEEECCEEEEEEECCCCCCCcEEEEECCCCEEEEcCccccCCCCC---CCCCCHHHHHHHHHHHHccCCCcEEEeCC
Confidence 999999999999999999999999999999889999999998654333 2567999999999999999887 799999
Q ss_pred CCCcCC
Q 009940 388 GRVNLW 393 (522)
Q Consensus 388 G~~~~~ 393 (522)
|++..+
T Consensus 170 g~~~~~ 175 (254)
T 1xm8_A 170 EYTLSN 175 (254)
T ss_dssp CCHHHH
T ss_pred cchhcc
Confidence 997643
No 21
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.94 E-value=9.9e-26 Score=226.03 Aligned_cols=190 Identities=19% Similarity=0.186 Sum_probs=142.2
Q ss_pred CccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhCC----C
Q 009940 181 TLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLP----R 256 (522)
Q Consensus 181 ~~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~~----~ 256 (522)
.+...++.+|+|++.. ...|+|++..+ ++.+|||||.... ...+.+.+++.+ +
T Consensus 37 ~~~~~~i~~~v~~~~~--------~~~n~~li~~~--------------~~~iLID~G~~~~-~~~~~~~l~~~g~~~~~ 93 (294)
T 3m8t_A 37 PFEPFQLIDNIYYVGT--------DGIAVYVIKTS--------------QGLILMDTAMPQS-TGMIKDNIAKLGFKVAD 93 (294)
T ss_dssp CCCCEEEETTEEECCC--------SSSCCEEEEET--------------TEEEEECCCCGGG-HHHHHHHHHHTTCCGGG
T ss_pred CCCCEEEeCCEEEeCC--------CCeEEEEEEEC--------------CceEEEECCCchh-HHHHHHHHHHcCCCHHH
Confidence 3456778888888732 12355555543 5689999998533 345555555554 4
Q ss_pred ccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCC-----------C--CCCceecCCCceEEECCEEEEEE
Q 009940 257 KLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD-----------W--SLGYTSVSGSEDICVGGQRLTVV 323 (522)
Q Consensus 257 i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~-----------~--~~~~~~l~~g~~l~lgg~~l~vi 323 (522)
+++||+||.|.||+||+..|++. ++++||+++.+...+.... + ......+.+|+.+.+|+.+++++
T Consensus 94 i~~ii~TH~H~DH~gg~~~l~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~ 172 (294)
T 3m8t_A 94 IKLILNTHAHLDHTGGFAEIKKE-TGAQLVAGERDKPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAH 172 (294)
T ss_dssp EEEEECSCCCHHHHTTHHHHHHH-HCCEEEEEGGGHHHHHHTCBTTBTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEE
T ss_pred CcEEEECCCCccccccHHHHhhc-cCCEEEEChHHHHHHhcccccCccccccCCCCCCCCceEeCCCCEEEeCCEEEEEE
Confidence 67999999999999999999887 5899999999887765431 0 11245688999999999999999
Q ss_pred eCCCCCCCCeEEEeCC--C----CEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCcCCh
Q 009940 324 FSPGHTDGHVALLHAS--T----NSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLELSPHALIPMHGRVNLWP 394 (522)
Q Consensus 324 ~tPGHT~g~i~l~~~~--~----~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~~l~~~~ivPgHG~~~~~~ 394 (522)
++||||+|+++++++. . ++||+||+++.............+..+|.+|++++.++++++++||||+++...
T Consensus 173 ~~pgHt~g~~~~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~v~pgHg~~~~~~ 249 (294)
T 3m8t_A 173 ATPGHSPGCTSWEMTVKDGKEDREVLFFCSGTVALNRLVGQPTYAGIVDDYRATFAKAKAMKIDVLLGPHPEVYGMQ 249 (294)
T ss_dssp ECCSSSTTCEEEEEEEEETTEEEEEEECCCCCCTTCCCSSSCSSTTHHHHHHHHHHHHHHSCCSEEECSSGGGTTHH
T ss_pred eCCCCCccCEEEEEEccCCCccceEEEEcCccCCCCcCcCCCCCCchHHHHHHHHHHHHCCCCCEEEcCCCChhchH
Confidence 9999999999999862 2 599999998543221111112346899999999999999999999999987543
No 22
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.93 E-value=1.7e-25 Score=227.53 Aligned_cols=179 Identities=19% Similarity=0.201 Sum_probs=140.1
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhC----C------CccEEEEcCCCccccCCHHHHHHhCC------CCEEEEcHhHHH
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASL----P------RKLIVFVTHHHRDHVDGLSIIQKCNP------DAILLAHENTMR 293 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~----~------~i~~IiiTH~H~DHiGG~~~l~~~~p------~a~V~a~~~~~~ 293 (522)
++.+|||||.... .+.+.+++. + ++++||+||.|+||+||+..|++.+| +++||+++.+.
T Consensus 51 ~~~ilID~G~~~~---~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~~~v~~~~~~~- 126 (311)
T 2p18_A 51 HTLAAVDVNADYK---PILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVPVVVVGGANDS- 126 (311)
T ss_dssp TEEEEESCCSCCH---HHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHHHHSCC--CCCEEEEEGGGT-
T ss_pred CcEEEEeCCCChH---HHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHHHHhhhhcccCCCCEEEEechhc-
Confidence 4589999975543 233333333 3 46799999999999999999998876 79999997652
Q ss_pred HhccCCCCCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEe--CC---C-CEEEEcccccCCCCcccccCCCCCHHH
Q 009940 294 RIGKDDWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLH--AS---T-NSLIVGDHCVGQGSAVLDITAGGNMTD 367 (522)
Q Consensus 294 ~l~~~~~~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~--~~---~-~vLftGD~l~~~~~~~~~~~~~~~~~~ 367 (522)
.+.....+.+|+.+.+|+.+++++++||||+||++|++ ++ . ++||+||+++..+.+. .+.++..+
T Consensus 127 ------~~~~~~~l~~g~~l~lg~~~l~vi~tPGHT~g~i~~~~~~~~~~~~~~~lftGD~l~~~~~g~---~~~~~~~~ 197 (311)
T 2p18_A 127 ------IPAVTKPVREGDRVQVGDLSVEVIDAPCHTRGHVLYKVQHPQHPNDGVALFTGDTMFIAGIGA---FFEGDEKD 197 (311)
T ss_dssp ------CTTCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECTTCGGGCEEEEEETTEETTEECC---CTTSCHHH
T ss_pred ------CCCCceEeCCCCEEEECCeEEEEEECCCCCcccEEEEEecCCcCCcCCEEEEcCccccCCcCC---CCCCCHHH
Confidence 12245678999999999999999999999999999998 56 6 8999999998764433 24679999
Q ss_pred HHHHHHHHhcC--------CCc-EEEcCCCCCcCChHHHHH-------HHHHHHHHHHHHHHHHHHcCCC
Q 009940 368 YFQSTYKFLEL--------SPH-ALIPMHGRVNLWPKHMLC-------GYLKNRRAREAAILQAIENGVE 421 (522)
Q Consensus 368 ~~~SL~~l~~l--------~~~-~ivPgHG~~~~~~~~~i~-------~~l~~~~~r~~~il~~l~~g~~ 421 (522)
|++|+++|.++ +.+ .|+||||++..+....+. ++.++.+++.+++.+.+++|..
T Consensus 198 ~~~Sl~kl~~l~~~~~~~~~~~~~v~pgHg~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~v~~~~~~g~~ 267 (311)
T 2p18_A 198 MCRAMEKVYHIHKGNDYALDKVTFIFPGHEYTSGFMTFSEKTFPDRASDDLAFIQAQRAKYAAAVKTGDP 267 (311)
T ss_dssp HHHHHHHHHTTTGGGTTGGGGGEEEEESBCCHHHHHHHHHHHCSCTTSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhhcccccCCCCeEEEeCCCchhhhhHHHHHhCCCccchhhHHHHHHHHHHHHHHHcCCC
Confidence 99999999999 776 599999987654433322 2377888888899999988754
No 23
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.93 E-value=4.8e-25 Score=231.99 Aligned_cols=217 Identities=16% Similarity=0.199 Sum_probs=155.7
Q ss_pred CCCCCccceecC--CeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEe-c-CCeEEEcCCCCChHHHHHHHHHH
Q 009940 177 KVPPTLSYQEYP--PGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVA-Q-GEALIVDPGCRSEFHEELLKVVA 252 (522)
Q Consensus 177 ~~~~~~~~~eva--pGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~-~-g~~iLIDtG~~~~~~~~L~~~~~ 252 (522)
.|+ .+.++++. |||||++......+-| .+.|-+. .|.+.|+|++ + ++.+|||||.... .+.+.+.++
T Consensus 12 ~m~-~~~~~ki~d~p~iy~vg~~d~~~~~F--e~~~~~~-----~GtsyNsYLI~~~~~~vLIDtg~~~~-~~~~l~~l~ 82 (410)
T 4dik_A 12 HMP-KIWTERIFDDPEIYVLRIDDDRIRYF--EAVWEIP-----EGISYNAYLVKLNGANVLIDGWKGNY-AKEFIDALS 82 (410)
T ss_dssp SCC-CEEEEEEETTTEEEEEEEEECSCCEE--TTTEECT-----TCEEEEEEEEECSSCEEEECCCCGGG-HHHHHHHHT
T ss_pred cCC-cceEEEEecCCCEEEEeeecCCCcce--eeeeeCC-----CceEEEEEEEEECCeEEEEeCCCcch-HHHHHHHHH
Confidence 344 44456664 5899998866544444 3444433 2444466666 3 4589999996543 334444444
Q ss_pred hC---CCccEEEEcCCCccccCCHHHHHHh-CCCCEEEEcHhHHHHhccCCCCCCceecCCCceEEECCEEEEEEeCCC-
Q 009940 253 SL---PRKLIVFVTHHHRDHVDGLSIIQKC-NPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVVFSPG- 327 (522)
Q Consensus 253 ~~---~~i~~IiiTH~H~DHiGG~~~l~~~-~p~a~V~a~~~~~~~l~~~~~~~~~~~l~~g~~l~lgg~~l~vi~tPG- 327 (522)
+. .++++||+||.|+||+||+..+.++ .|+++|++++.....+....-......+++|+++++|+.++++++|||
T Consensus 83 ~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l~~~~~~~~~~~v~dGd~l~lG~~~L~~i~tPg~ 162 (410)
T 4dik_A 83 KIVDPKEITHIIVNHTEPDASGSLPATLKTIGHDVEIIASNFGKRLLEGFYGIKDVTVVKDGEEREIGGKKFKFVMTPWL 162 (410)
T ss_dssp TTSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHHHHHHCCCCEEECCTTCEEEETTEEEEEEECTTS
T ss_pred HhcCcccCCEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHHHHHHHhhcCccceeEecCCCEEeecceEEEEecCCCC
Confidence 43 3577999999999999999999876 479999999998877654322235678999999999999999999999
Q ss_pred CCCCCeEEEeCCCCEEEEcccccCCCCccccc-CCCCC-------------------HHHHHHHHHHHhcCCCcEEEcCC
Q 009940 328 HTDGHVALLHASTNSLIVGDHCVGQGSAVLDI-TAGGN-------------------MTDYFQSTYKFLELSPHALIPMH 387 (522)
Q Consensus 328 HT~g~i~l~~~~~~vLftGD~l~~~~~~~~~~-~~~~~-------------------~~~~~~SL~~l~~l~~~~ivPgH 387 (522)
||||+++++. +++||+||++.....+..-. ..... -....++|+++.++++++|+|||
T Consensus 163 H~p~~~~~y~--~~iLFsgD~fg~h~~~~~~~d~~~~~~e~~~~~~~~yy~~i~~p~~~~v~~~L~kl~~Ldi~~I~P~H 240 (410)
T 4dik_A 163 HWPDTMVTYL--DGILFSCDVGGGYLLPEILDDSNESVVERYLPHVTKYIVTVIGHYKNYILEGAEKLSSLKIKALLPGH 240 (410)
T ss_dssp SSTTCEEEEE--TTEEEEETTTCCSSCCSSSBTTCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHTSCCSEEEESS
T ss_pred CCCCCeeEEe--CCceEccccccccccCccccccchhhHHHHHHHHHHHHHhhccchHHHHHHHHHHHhCCCCCEEecCC
Confidence 9999999997 58999999975544432110 00001 12335788999999999999999
Q ss_pred CCCcC-ChHHHHHHHHHH
Q 009940 388 GRVNL-WPKHMLCGYLKN 404 (522)
Q Consensus 388 G~~~~-~~~~~i~~~l~~ 404 (522)
|++++ ++.+.++.|.+.
T Consensus 241 Gpi~r~~~~~ii~~Y~~w 258 (410)
T 4dik_A 241 GLIWKKDPQRLLNHYVSV 258 (410)
T ss_dssp SCBBSSCHHHHHHHHHHH
T ss_pred cchhhcCHHHHHHHHHHh
Confidence 99985 677777777753
No 24
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.93 E-value=4.4e-25 Score=231.49 Aligned_cols=215 Identities=15% Similarity=0.178 Sum_probs=151.7
Q ss_pred ccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEe-c-CCeEEEcCCCCChH---HHHHHHHHH--hC
Q 009940 182 LSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVA-Q-GEALIVDPGCRSEF---HEELLKVVA--SL 254 (522)
Q Consensus 182 ~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~-~-g~~iLIDtG~~~~~---~~~L~~~~~--~~ 254 (522)
+..++++||||+++........|. + + .. .|...|+|++ + ++.+|||||..... .+.+.+... ..
T Consensus 3 ~~~~~i~~~v~~~~~~~~~~~~f~--~-~-~~-----~g~~~n~~li~~~~~~iLiD~g~~~~~~~~~~~l~~~~~~~~~ 73 (404)
T 2ohh_A 3 AAAKRISDGVYWTGVLDWDLRNYH--G-Y-TL-----QGTTYNAYLVCGDEGVALIDNSYPGTFDELMARVEDALQQVGM 73 (404)
T ss_dssp CCCEEEETTEEECCEEETTCCEET--T-E-EC-----SCEEECCEEEECSSCEEEECCCCTTCHHHHHHHHHHHHHHHTC
T ss_pred ceeEEeeCCeEEEEeccCCccccc--e-e-cC-----CCCeEEEEEEEeCCcEEEEeCCCCccHHHHHHHHHHHhccCCc
Confidence 456799999999965432222221 2 2 11 1223344444 3 34899999986332 223333210 34
Q ss_pred CCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC-CC--CCCceecCCCceEEECCEEEEEEeCC-CCCC
Q 009940 255 PRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-DW--SLGYTSVSGSEDICVGGQRLTVVFSP-GHTD 330 (522)
Q Consensus 255 ~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~-~~--~~~~~~l~~g~~l~lgg~~l~vi~tP-GHT~ 330 (522)
.++++|++||.|.||+||+..+++.+|+++||+++.+.+.+... .. ......+.+|+.+++|+.+++++++| |||+
T Consensus 74 ~~i~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~p~gH~~ 153 (404)
T 2ohh_A 74 ERVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEVAVKGLLKHYPSLREAEFMTVKTGDVLDLGGKTLTFLETPLLHWP 153 (404)
T ss_dssp CCCCEEECSCCSHHHHTTHHHHHHHSTTCCEEECHHHHHHHHHHCGGGGGSCEEECCTTCEEECSSCEEEEEECTTSSST
T ss_pred cCCCEEEeCCCCCcccchHHHHHHHCCCCEEEECHHHHHHHHHHhcccccCCceEcCCCCEEEECCEEEEEEeCCCCCCC
Confidence 57889999999999999999999999999999999887766432 11 12456788999999999999999999 9999
Q ss_pred CCeEEEeCCCCEEEEcccccCCC--CcccccC-C----------------CCCHHHHHHHHHHHhcCCC----cEEEcCC
Q 009940 331 GHVALLHASTNSLIVGDHCVGQG--SAVLDIT-A----------------GGNMTDYFQSTYKFLELSP----HALIPMH 387 (522)
Q Consensus 331 g~i~l~~~~~~vLftGD~l~~~~--~~~~~~~-~----------------~~~~~~~~~SL~~l~~l~~----~~ivPgH 387 (522)
|++++++++.++||+||++.... ...+... + ......+.+|++++.++++ ++|+|||
T Consensus 154 ~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~~~~i~pgH 233 (404)
T 2ohh_A 154 DSMFTLLDEDGILFSNDAFGQHLCCPQRLDREIPEYILMDAARKFYANLITPLSKLVLKKFDEVKELGLLERIQMIAPSH 233 (404)
T ss_dssp TCEEEEEETTTEEECTTTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCGGGCSEEECSS
T ss_pred CceEEEECCCcEEEecCccccCcCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccEEecCC
Confidence 99999999899999999983222 2212110 0 0122456889999999999 8999999
Q ss_pred CCCcCChHHHHHHHHHHH
Q 009940 388 GRVNLWPKHMLCGYLKNR 405 (522)
Q Consensus 388 G~~~~~~~~~i~~~l~~~ 405 (522)
|.++.+..+.+++|++..
T Consensus 234 g~~~~~~~~~~~~~~~~~ 251 (404)
T 2ohh_A 234 GQIWTDPMKIIEAYTGWA 251 (404)
T ss_dssp SCBBSSHHHHHHHHHHHH
T ss_pred CccccCHHHHHHHHHHHh
Confidence 999877666667776553
No 25
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.93 E-value=2.4e-25 Score=220.85 Aligned_cols=148 Identities=20% Similarity=0.277 Sum_probs=120.1
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCC-CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecC
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVS 308 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~-~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~ 308 (522)
++.+|||||.. ..+.+.+++.+ ++++|++||.|.||+||+..+++.+|+++||+++.+. +.....+.
T Consensus 23 ~~~vlID~G~~----~~i~~~l~~~g~~i~~IllTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~--------~~~~~~~~ 90 (260)
T 1qh5_A 23 KEAAIVDPVQP----QKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRI--------GALTHKIT 90 (260)
T ss_dssp TEEEEESCSSH----HHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHSTTCEEEESCTTS--------TTCSEECC
T ss_pred CEEEEEcCCCH----HHHHHHHHHcCCCccEEEeCCCCccccCCHHHHHHHCCCCEEEECcccC--------CCCCEEeC
Confidence 35899999943 23444444433 3679999999999999999999999899999986432 22356788
Q ss_pred CCceEEECCEEEEEEeCCCCCCCCeEEEe-----CCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHH-HHhcCCCc-
Q 009940 309 GSEDICVGGQRLTVVFSPGHTDGHVALLH-----ASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTY-KFLELSPH- 381 (522)
Q Consensus 309 ~g~~l~lgg~~l~vi~tPGHT~g~i~l~~-----~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~-~l~~l~~~- 381 (522)
+|+.+.+|+.+++++++||||+||+++++ ++.+++|+||+++..+.+. .+.++..++++|++ ++..++.+
T Consensus 91 ~g~~~~~g~~~~~vi~tPGHt~g~~~~~~~~~~~~~~~~lftGD~l~~~~~g~---~~~~~~~~~~~Sl~~~l~~l~~~~ 167 (260)
T 1qh5_A 91 HLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGK---FYEGTADEMCKALLEVLGRLPPDT 167 (260)
T ss_dssp TTCEEEETTEEEEEEECCSSSTTCEEEEEECSSSSSCCEEEEETTEETTEECC---CTTCCHHHHHHHHHTTTTTSCTTC
T ss_pred CCCEEEECCEEEEEEECCCCCCCCEEEEEeccCCCCCCEEEEcCccccCCcCC---CCCCCHHHHHHHHHHHHHcCCCCe
Confidence 99999999999999999999999999998 6789999999998655443 35678999999995 68899888
Q ss_pred EEEcCCCCCcC
Q 009940 382 ALIPMHGRVNL 392 (522)
Q Consensus 382 ~ivPgHG~~~~ 392 (522)
.|+||||++..
T Consensus 168 ~v~pgHg~~~~ 178 (260)
T 1qh5_A 168 RVYCGHEYTIN 178 (260)
T ss_dssp EEEESBCCHHH
T ss_pred EEEcCCCchhc
Confidence 58999998643
No 26
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.92 E-value=2.3e-24 Score=216.67 Aligned_cols=187 Identities=19% Similarity=0.235 Sum_probs=140.4
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCC----CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCC------
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLP----RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD------ 299 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~----~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~------ 299 (522)
++.+|||||.... .+.+.+.+++.+ ++++|++||.|.||+||+..|++.+ +++||+++.+...+....
T Consensus 67 ~~~iLiD~G~~~~-~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~l~~~~~~~~~~ 144 (303)
T 4ax1_B 67 AGHILVDAATPQA-GPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKAT-GAPVYARAPAIDTLKRGLPDRTDP 144 (303)
T ss_dssp TCEEEECCBSTTC-HHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHH-CCCEEEEHHHHHHHHHTSCCTTST
T ss_pred CcEEEEECCCccc-HHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhc-CCEEEEcHHHHHHHhccccCcccc
Confidence 5689999997533 345555555543 2679999999999999999998875 899999999887765431
Q ss_pred ---------CCCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeCCC-----CEEEEcccccCCCCcccccC----C
Q 009940 300 ---------WSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHAST-----NSLIVGDHCVGQGSAVLDIT----A 361 (522)
Q Consensus 300 ---------~~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~-----~vLftGD~l~~~~~~~~~~~----~ 361 (522)
.......+.+|+++++|+.+++++++||||+|++++++++. +.+|+||+++.........+ .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~g~~~~~~~~~~~~~~~~~l~gD~l~~~~~~~~~~~~~~~~ 224 (303)
T 4ax1_B 145 NFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTPGGTSWTWRSCEGDDCRQMVYADSLTAISDDVFRYSDDAAH 224 (303)
T ss_dssp TGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCCCCCCSSCCTTCGGGS
T ss_pred ccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCCCCccceEEEEEecCCCceeEEEEeCCccccCcCcccCCCCCCC
Confidence 11234678899999999999999999999999999998752 34666999886554444332 2
Q ss_pred CCCHHHHHHHHHHHhcCCCcEEEcCCCCCcCCh-------------HHHHHHHHHHHHHHHHHHHHHHHc
Q 009940 362 GGNMTDYFQSTYKFLELSPHALIPMHGRVNLWP-------------KHMLCGYLKNRRAREAAILQAIEN 418 (522)
Q Consensus 362 ~~~~~~~~~SL~~l~~l~~~~ivPgHG~~~~~~-------------~~~i~~~l~~~~~r~~~il~~l~~ 418 (522)
..+..+|.+|++++..+++++++||||.+.... .+...++++...++.++.++.-+.
T Consensus 225 ~~~~~~~~~sl~~l~~l~~~~vv~~Hg~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~ 294 (303)
T 4ax1_B 225 PGYLAAFRNTLARVAALDCDILVTPHPSASGLWNRIGPRAAAPLMDTTACRRYAQGARQRLEKRLAEEAA 294 (303)
T ss_dssp TTHHHHHHHHHHHHHTSCCSEEECSSGGGGTGGGTSSTTCCSCSCCTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHhcCCCCEEEcCCcchhhHHHHhcccCCCCccCHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 246899999999999999999999999975411 234566666666666555554443
No 27
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.92 E-value=1.2e-24 Score=207.13 Aligned_cols=190 Identities=17% Similarity=0.118 Sum_probs=142.1
Q ss_pred ceecC-CeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhCCCccEEEE
Q 009940 184 YQEYP-PGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLPRKLIVFV 262 (522)
Q Consensus 184 ~~eva-pGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~Iii 262 (522)
++++. ||+|.+..... .+....|+|++..+ ++.+|||||.... .+.+.+++.+++++|++
T Consensus 2 ~~~i~~~~v~~~~~~~~--~~~~~~n~~li~~~--------------~~~iliD~g~~~~---~~~~~l~~~g~i~~ii~ 62 (201)
T 2p97_A 2 MKSLHRPDLYSWSTFNP--ARNIDFNGFAWIRP--------------EGNILIDPVALSN---HDWKHLESLGGVVWIVL 62 (201)
T ss_dssp CEECSSTTEEEEEEEET--TTTEEEEEEEECCT--------------TCCEEESCCCCCH---HHHHHHHHTTCCSEEEC
T ss_pred cccccCCCEEeeecccC--CCCcceeEEEEEeC--------------CeeEEEECCCCcH---HHHHHHHhcCCCCEEEE
Confidence 46888 99999864211 11223566666543 4689999995443 34445555668889999
Q ss_pred cCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecCCCceEEECCEEEEEEeCC-CCCCCCeEEEeCCCC
Q 009940 263 THHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVVFSP-GHTDGHVALLHASTN 341 (522)
Q Consensus 263 TH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~~g~~l~lgg~~l~vi~tP-GHT~g~i~l~~~~~~ 341 (522)
||. ||+||+..|++.+ +++|++++.+.+.+... ....+.+|+.+.. .++++++| |||+||+++++++ +
T Consensus 63 TH~--DH~gg~~~~~~~~-~a~v~~~~~~~~~~~~~----~~~~~~~g~~~~~---~~~~~~~p~gHt~g~~~~~~~~-~ 131 (201)
T 2p97_A 63 TNS--DHVRSAKEIADQT-YTKIAGPVAEKENFPIY----CDRWLSDGDELVP---GLKVMELQGSKTPGELALLLEE-T 131 (201)
T ss_dssp SSG--GGCTTHHHHHHHS-CCEEEEEGGGTTSCSSC----CSEEECTTCBSST---TEEEEEECSSSSTTEEEEEETT-T
T ss_pred CCc--hhhhhHHHHHHhc-CCEEEEcHhHhhhhccc----CceecCCCCEEcc---eEEEEECCCCCCCCcEEEEEcC-C
Confidence 999 9999999999987 59999999887766432 2466778887642 59999999 9999999999987 9
Q ss_pred EEEEcccccCCCCcccccC---CCCCHHHHHHHHHHHhc-CCCcEEEcCCCCCc-CChHHHHHHHHH
Q 009940 342 SLIVGDHCVGQGSAVLDIT---AGGNMTDYFQSTYKFLE-LSPHALIPMHGRVN-LWPKHMLCGYLK 403 (522)
Q Consensus 342 vLftGD~l~~~~~~~~~~~---~~~~~~~~~~SL~~l~~-l~~~~ivPgHG~~~-~~~~~~i~~~l~ 403 (522)
+||+||+++.......... ...+..+|++|++++.+ ++++.++||||.++ .+..+.++++++
T Consensus 132 ~lf~GD~~~~~~~g~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~v~pgHg~~~~~~~~~~l~~~~~ 198 (201)
T 2p97_A 132 TLITGDLVRAYRAGGLEILPDEKLMNKQKVVASVRRLAALEKVEAVLVGDGWSVFRDGRDRLKELVA 198 (201)
T ss_dssp EEEECSSEEBSSTTSCEECCGGGCSCHHHHHHHHHHHHTCTTCCEEEESBBCCBCSCHHHHHHHHHH
T ss_pred EEEECccccccCCCccccCCccccCCHHHHHHHHHHHHhcCCCCEEEeCCCcceecCHHHHHHHHHH
Confidence 9999999987622222111 23689999999999999 78999999999765 566666666654
No 28
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.92 E-value=1.6e-24 Score=226.70 Aligned_cols=216 Identities=15% Similarity=0.182 Sum_probs=152.8
Q ss_pred ceecCCeEEEEeccCCCCCCCccccE-EEEccCCCCCCCcceEEEe-cCCeEEEcCCCCChHHHHHHHHHHh---CCCcc
Q 009940 184 YQEYPPGVILVPMQSRTAKPFLTTNL-IVFAPDSVSDDCGNHRFVA-QGEALIVDPGCRSEFHEELLKVVAS---LPRKL 258 (522)
Q Consensus 184 ~~evapGv~~v~~~~~~~~p~~~~N~-~~i~~~~~~~g~~~~~~l~-~g~~iLIDtG~~~~~~~~L~~~~~~---~~~i~ 258 (522)
+.+++||||+++........|. +. +.+. .|..+|+|++ +++.+|||||.... .+.+.+.+++ ..+++
T Consensus 3 ~~~i~~~v~~v~~~d~~~~~f~--~~~~~~~-----~g~~~n~~li~~~~~iliD~g~~~~-~~~~~~~l~~~~~~~~i~ 74 (398)
T 1ycg_A 3 PVAITDGIYWVGAVDWNIRYFH--GPAFSTH-----RGTTYNAYLIVDDKTALVDTVYEPF-KEELIAKLKQIKDPVKLD 74 (398)
T ss_dssp CEEEETTEEECCEEESSCCEET--TTTEECT-----TCEEECCEEECSSSCEEECCCCGGG-HHHHHHHHHHHCSSCCCS
T ss_pred ceEEeCCEEEEEeecCCccccc--ceeccCC-----CCeeEEEEEEECCCEEEEeCCCccc-HHHHHHHHHHhcCcccCC
Confidence 4689999999965422211121 11 1111 1333444554 34589999998632 2333333333 45678
Q ss_pred EEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC-CC-CCCceecCCCceEEECCEEEEEEeCC-CCCCCCeEE
Q 009940 259 IVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-DW-SLGYTSVSGSEDICVGGQRLTVVFSP-GHTDGHVAL 335 (522)
Q Consensus 259 ~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~-~~-~~~~~~l~~g~~l~lgg~~l~vi~tP-GHT~g~i~l 335 (522)
+|++||.|.||+||+..+.+.+|+++||+++.+.+.+... .. ......+.+|+.+++|+.+++++++| |||+|++++
T Consensus 75 ~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~ 154 (398)
T 1ycg_A 75 YLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSLKAHYSHIDFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFT 154 (398)
T ss_dssp EEEESCCSHHHHTTHHHHHHHCTTCEEEECHHHHHHHHHHTCSCCCEEEECCTTCEEECSSCEEEEEECTTSSSTTCEEE
T ss_pred EEEeCCCCcchhhhHHHHHHHCCCCEEEEcHHHHHHHHHHhCCCCcceEEeCCCCEEeeCCcEEEEEeCCCCCCCCcEEE
Confidence 9999999999999999999999999999999988766432 11 12456788999999999999999999 899999999
Q ss_pred EeCCCCEEEEcccccCCCCcccccCCC-------------------CCHHHHHHHHHHHhc--CCCcEEEcCCCCCcC-C
Q 009940 336 LHASTNSLIVGDHCVGQGSAVLDITAG-------------------GNMTDYFQSTYKFLE--LSPHALIPMHGRVNL-W 393 (522)
Q Consensus 336 ~~~~~~vLftGD~l~~~~~~~~~~~~~-------------------~~~~~~~~SL~~l~~--l~~~~ivPgHG~~~~-~ 393 (522)
+.++.+++|+||++...+......+.. .....+.++++++.+ +++++|+||||++.. +
T Consensus 155 ~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~Hg~~~~~~ 234 (398)
T 1ycg_A 155 YVPEEALLLPNDAFGQHIATSVRFDDQVDAGLIMDEAAKYYANILMPFSNLITKKLDEIQKINLAIKTIAPSHGIIWRKD 234 (398)
T ss_dssp EETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBBCSC
T ss_pred EECCCcEEEeccccccccCccccccccccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhCCCCccEEECCCchhhhCC
Confidence 999899999999965443322101010 112334689999999 999999999999886 6
Q ss_pred hHHHHHHHHHHHHH
Q 009940 394 PKHMLCGYLKNRRA 407 (522)
Q Consensus 394 ~~~~i~~~l~~~~~ 407 (522)
..+.+++|++....
T Consensus 235 ~~~~l~~~~~~~~~ 248 (398)
T 1ycg_A 235 PGRIIEAYARWAEG 248 (398)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc
Confidence 77788888765543
No 29
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.92 E-value=1.3e-24 Score=228.95 Aligned_cols=216 Identities=14% Similarity=0.096 Sum_probs=151.0
Q ss_pred ccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEe-cCCeEEEcCCCCChHHHHHHHHHHh---CCCc
Q 009940 182 LSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVA-QGEALIVDPGCRSEFHEELLKVVAS---LPRK 257 (522)
Q Consensus 182 ~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~-~g~~iLIDtG~~~~~~~~L~~~~~~---~~~i 257 (522)
+...+++||||+++........|. + +.+ + .|..+|+|++ +++.+|||||.... .+.+.+.+++ ..++
T Consensus 8 ~~~~~i~~~v~~v~~~~~~~~~f~--~-~~~--~---~g~~~n~~li~~~~~iLID~G~~~~-~~~~~~~l~~~~~~~~i 78 (414)
T 2q9u_A 8 VQDQEMIPGVYWVGIVDWMVRIFH--G-YHT--D---EGSSYNSYFIDDECPTVIDSVKYPF-AEEWLSRIAACCPLDKI 78 (414)
T ss_dssp SCCCEEETTEEECCEEESSCCEET--T-EEC--T---TCEEECCEEECSSSCEEECCCCGGG-HHHHHHHHHHHSCGGGC
T ss_pred ceeEEeeCCeEEEEEeeCCccccc--c-ccC--C---CCcceeEEEEECCCEEEEeCCCccc-HHHHHHHHHHhcCcccC
Confidence 556799999999865322212221 1 111 1 1223344444 34589999998532 2333333333 2457
Q ss_pred cEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC-CC-CCCceecCCCceEEECCEEEEEEeCC-CCCCCCeE
Q 009940 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-DW-SLGYTSVSGSEDICVGGQRLTVVFSP-GHTDGHVA 334 (522)
Q Consensus 258 ~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~-~~-~~~~~~l~~g~~l~lgg~~l~vi~tP-GHT~g~i~ 334 (522)
++||+||.|.||+||+..+++.+|+++||+++.+.+.+... .. ..+...+.+|+.+++|+.+++++++| |||+|+++
T Consensus 79 ~~ii~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~~~~~~~~~p~gHt~~~~~ 158 (414)
T 2q9u_A 79 KYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLKILYGMEKATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTF 158 (414)
T ss_dssp CEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHHHHHHHHHHCCTTCCEEECCTTCCEECSSCEEEEEECTTSSSTTCEE
T ss_pred CEEEeCCCCcchhcCHHHHHHHCCCCEEEECHHHHHHHHHHhCCCCCeeEEeCCCCEEEECCeEEEEEeCCCCCCCCceE
Confidence 79999999999999999999999999999999887766421 11 12456788999999999999999999 99999999
Q ss_pred EEeCCCCEEEEcccccCCCCcc--cccC-----------------CCCCHHHHHHHHHHHhcCCCcEEEcCCCCCcCC--
Q 009940 335 LLHASTNSLIVGDHCVGQGSAV--LDIT-----------------AGGNMTDYFQSTYKFLELSPHALIPMHGRVNLW-- 393 (522)
Q Consensus 335 l~~~~~~vLftGD~l~~~~~~~--~~~~-----------------~~~~~~~~~~SL~~l~~l~~~~ivPgHG~~~~~-- 393 (522)
++.++.++||+||++....... +... .......+.++++++.++++++|+||||+++..
T Consensus 159 ~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~i~pgHg~~~~~~~ 238 (414)
T 2q9u_A 159 TYCPEDKILFSNDGFGQHYATSRRWADECDVSHVMHLFKEYTANILGLFSAQMRKALEVASTVEIKYILSAHGVSWRGDA 238 (414)
T ss_dssp EEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCSEEEESSSCBEEHHH
T ss_pred EEECCCeEEEEccccccccCcccccccccchhhHHHHHHHHHHHheehHHHHHHHHHHHHhCCCCCEEECCCcCeecCCC
Confidence 9999899999999764332111 1110 012235668999999999999999999998753
Q ss_pred hHHHHHHHHHHHH
Q 009940 394 PKHMLCGYLKNRR 406 (522)
Q Consensus 394 ~~~~i~~~l~~~~ 406 (522)
..+.++.|++...
T Consensus 239 ~~~~l~~~~~~~~ 251 (414)
T 2q9u_A 239 MGLAIAEYDRWSK 251 (414)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 4566666666553
No 30
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.92 E-value=2.6e-24 Score=225.50 Aligned_cols=214 Identities=14% Similarity=0.137 Sum_probs=150.0
Q ss_pred cceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEec-CCeEEEcCCCCChHHHHHHHHHHhC---CCcc
Q 009940 183 SYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQ-GEALIVDPGCRSEFHEELLKVVASL---PRKL 258 (522)
Q Consensus 183 ~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~-g~~iLIDtG~~~~~~~~L~~~~~~~---~~i~ 258 (522)
..++++||||+++........|.. |- . ...|..+|+|++. ++.+|||||.... .+.+.+.+.+. .+++
T Consensus 2 ~~~~i~~~v~~v~~~d~~~~~f~~---~~-~---~~~g~~~n~~li~~~~~iliD~G~~~~-~~~~~~~l~~~~~~~~i~ 73 (402)
T 1e5d_A 2 QATKIIDGFHLVGAIDWNSRDFHG---YT-L---SPMGTTYNAYLVEDEKTTLFDTVKAEY-KGELLCGIASVIDPKKID 73 (402)
T ss_dssp CCEEEETTEEEEEEEETTCCEETT---TE-E---CTTCEEEEEEEECSSSCEEECCCCGGG-HHHHHHHHHTTSCGGGCC
T ss_pred CceEeeCCeEEEEeccCCcccccC---CC-c---CCCCcceEEEEEECCCEEEEeCCCCcc-HHHHHHHHHHhCCcccCC
Confidence 357899999999754322111210 00 0 0113334455553 4589999998632 23444444443 3567
Q ss_pred EEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC-CC-CCCceecCCCceEEECCEEEEEEeCC-CCCCCCeEE
Q 009940 259 IVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-DW-SLGYTSVSGSEDICVGGQRLTVVFSP-GHTDGHVAL 335 (522)
Q Consensus 259 ~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~-~~-~~~~~~l~~g~~l~lgg~~l~vi~tP-GHT~g~i~l 335 (522)
+|++||.|.||+||+..+.+.+|+++||+++.+...+... .. ......+.+|+.+++|+.+++++++| |||+|++++
T Consensus 74 ~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~ 153 (402)
T 1e5d_A 74 YLVIQHLELDHAGALPALIEACQPEKIFTSSLGQKAMESHFHYKDWPVQVVKHGETLSLGKRTVTFYETRMLHWPDSMVS 153 (402)
T ss_dssp EEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHHHHHHHHHHCCSSCCEEEECTTCEEECSSCEEEEEECTTSSSTTCEEE
T ss_pred EEEeCCCCccccccHHHHHHHCCCCEEEEChHHHHHHHHHhCCCCCceEEcCCCCEEEECCCEEEEEeCCCCCCCCcEEE
Confidence 9999999999999999999988899999999987766421 11 23466789999999999999999999 999999999
Q ss_pred EeCCCCEEEEcccccCCCCcc--cccCC-----------------CCCHHHHHHHHHHHhc--CCCcEEEcCCCCCcC--
Q 009940 336 LHASTNSLIVGDHCVGQGSAV--LDITA-----------------GGNMTDYFQSTYKFLE--LSPHALIPMHGRVNL-- 392 (522)
Q Consensus 336 ~~~~~~vLftGD~l~~~~~~~--~~~~~-----------------~~~~~~~~~SL~~l~~--l~~~~ivPgHG~~~~-- 392 (522)
+.++.+++|+||++...+... +.... ......+.++++++.+ +++++|+||||.+..
T Consensus 154 ~~~~~~~l~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~Hg~~~~~~ 233 (402)
T 1e5d_A 154 WFADEKVLISNDIFGQNIAASERFSDQIPVHTLERAMREYYANIVNPYAPQTLKAIETLVGAGVAPEFICPDHGVIFRGA 233 (402)
T ss_dssp EETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBEESH
T ss_pred EECCCCEEEecccccCccccccccccccchhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhCCCCcCEEecCCcceeecC
Confidence 999899999999965433221 11000 0012344688999999 999999999999886
Q ss_pred -ChHHHHHHHHHH
Q 009940 393 -WPKHMLCGYLKN 404 (522)
Q Consensus 393 -~~~~~i~~~l~~ 404 (522)
+..+.++.|++.
T Consensus 234 ~~~~~~~~~~~~~ 246 (402)
T 1e5d_A 234 DQCTFAVQKYVEY 246 (402)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 355666776663
No 31
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.92 E-value=2e-24 Score=212.41 Aligned_cols=150 Identities=22% Similarity=0.362 Sum_probs=124.2
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCC-CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecC
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVS 308 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~-~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~ 308 (522)
++.+|||||... .+.+.+.+++.+ ++++|++||.|+||++|+..|++.+++++||+++.+.. .....+.
T Consensus 28 ~~~ilID~g~~~--~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~--------~~~~~~~ 97 (245)
T 2gcu_A 28 KPALLIDPVDKT--VDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGS--------KADLFLE 97 (245)
T ss_dssp CEEEEESCBGGG--HHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHSTTCEEEEEGGGCC--------CCSEEEC
T ss_pred CcEEEEeCCCch--HHHHHHHHHHCCCeeeEEEeCCCChhhhhhHHHHHHhCCCCeEEecccccc--------cCCEEcC
Confidence 458999999752 234444444443 36799999999999999999998778999999987632 2356788
Q ss_pred CCceEEECCEEEEEEeCCCCCCCCeEEEeCCC------CEEEEcccccCCCCcccccCCCCCHHHHHHHH-HHHhcCCCc
Q 009940 309 GSEDICVGGQRLTVVFSPGHTDGHVALLHAST------NSLIVGDHCVGQGSAVLDITAGGNMTDYFQST-YKFLELSPH 381 (522)
Q Consensus 309 ~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~------~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL-~~l~~l~~~ 381 (522)
+|+.+.+|+.+++++++||||+||+++++++. +++|+||+++..+.+..+. +.++..++++|| +++.+++++
T Consensus 98 ~g~~~~~g~~~i~v~~tpGHt~g~~~~~~~~~~~~~~~~~lftGD~~~~~~~~~~d~-~~~~~~~~~~sl~~~l~~l~~~ 176 (245)
T 2gcu_A 98 PGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDF-QEGSSDQLYESVHSQIFTLPKD 176 (245)
T ss_dssp TTCEEEETTEEEEEEECCSSSTTCEEEEECCSTTSCSSCEEEEETTSBTTBCCCCSS-TTCCHHHHHHHHHHHTTTSCTT
T ss_pred CCCEEEECCEEEEEEECCCCCCCCEEEEECCccccccccEEEECCccccCCccCCCC-CCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999875 7999999998766655443 467899999999 899999988
Q ss_pred -EEEcCCCCC
Q 009940 382 -ALIPMHGRV 390 (522)
Q Consensus 382 -~ivPgHG~~ 390 (522)
.|+||||..
T Consensus 177 ~~v~pgHg~~ 186 (245)
T 2gcu_A 177 TLIYPAHDYK 186 (245)
T ss_dssp CEEEESBCSS
T ss_pred EEEECCCCCC
Confidence 799999985
No 32
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.92 E-value=1.5e-24 Score=207.14 Aligned_cols=158 Identities=26% Similarity=0.379 Sum_probs=123.7
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCC-CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC--------CC
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD--------DW 300 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~-~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~--------~~ 300 (522)
++.+|||||... +.+.+.+++.+ ++++|++||.|.||+||+..+++.+ +++||+++.+.+.+... ..
T Consensus 24 ~~~iLiD~G~~~---~~l~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~ 99 (210)
T 2xf4_A 24 RLAALVDPGGDA---EKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHY-GVPVIGPEKEDEFWLQGLPAQSRMFGL 99 (210)
T ss_dssp CEEEEECCCSCH---HHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHHH-TCCEECCCGGGHHHHHTHHHHHHHTTC
T ss_pred CcEEEEcCCCCH---HHHHHHHHHcCCceeEEEECCCChhhhcCHHHHHHHc-CCcEEEecchHHHHhccchhhhhhcCC
Confidence 458999999643 34444444433 4679999999999999999998876 79999998765543211 11
Q ss_pred -----CCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHH-HH
Q 009940 301 -----SLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQST-YK 374 (522)
Q Consensus 301 -----~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL-~~ 374 (522)
..+...+.+|+.+.+|+.+++++++||||+|++++++++.+++|+||+++....+..+. +.++..+|++|+ ++
T Consensus 100 ~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~-~~~~~~~~~~sl~~~ 178 (210)
T 2xf4_A 100 DECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDEQSQLLISGDVIFKGGVGRSDF-PRGDHTQLIDAIKRK 178 (210)
T ss_dssp CCCCCCCCSBCCCTTCEEEETTEEEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEECCCCS-TTCCHHHHHHHHHHH
T ss_pred cccCCCCCceEECCCCEEEECCeEEEEEECCCCCCCcEEEEeCCCCEEEECCEeccCCcCCCCC-CCCCHHHHHHHHHHH
Confidence 12345688999999999999999999999999999999889999999987654333222 457899999999 78
Q ss_pred HhcCCCc-EEEcCCCCCcC
Q 009940 375 FLELSPH-ALIPMHGRVNL 392 (522)
Q Consensus 375 l~~l~~~-~ivPgHG~~~~ 392 (522)
+.+++++ .++||||++..
T Consensus 179 l~~l~~~~~v~pgHg~~~~ 197 (210)
T 2xf4_A 179 LLPLGDDVTFIPGHGPLST 197 (210)
T ss_dssp TGGGCTTCEEEESSSCCEE
T ss_pred HhcCCCCeEEECCCCCccc
Confidence 9999877 79999999865
No 33
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.92 E-value=4e-24 Score=215.96 Aligned_cols=159 Identities=21% Similarity=0.303 Sum_probs=125.2
Q ss_pred CCeEEEcCCCCC---------hHHHHHHHHHHhCC-CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhc---
Q 009940 230 GEALIVDPGCRS---------EFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIG--- 296 (522)
Q Consensus 230 g~~iLIDtG~~~---------~~~~~L~~~~~~~~-~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~--- 296 (522)
++++|||||... ...+.+.+.+++.+ ++++|++||.|+||++|+..|++.+ +++|++++.+...+.
T Consensus 28 ~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~-~a~i~~~~~~~~~~~~~~ 106 (298)
T 4efz_A 28 GECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYLKTRV-GGEIAIGRHVTRVQDVFG 106 (298)
T ss_dssp CEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCEEEEEECSSCCSSSBCCHHHHHHHH-CCEEEEETTHHHHHHHHH
T ss_pred CeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCcceEEEECCCchhhhhhHHHHHHHh-CCcEEEChhHHHHHHHHH
Confidence 358999999742 23445656555554 3679999999999999999999887 899999987654321
Q ss_pred ----cC-----CCCCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeCCCC--------EEEEcccccCCCCc--cc
Q 009940 297 ----KD-----DWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHASTN--------SLIVGDHCVGQGSA--VL 357 (522)
Q Consensus 297 ----~~-----~~~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~~--------vLftGD~l~~~~~~--~~ 357 (522)
.. ........+.+|+.+.+|+.+++++++||||+||++|++++.+ ++|+||+++....+ ..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~vi~tPGHT~g~~~~~~~~~~~~~~~~~~~lftGD~l~~~~~g~~r~ 186 (298)
T 4efz_A 107 KLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHAAHDARDAAAFVGDTLFMPDYGTARC 186 (298)
T ss_dssp HHTTCCTTSCSSSTTSSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEETTCCGGGCBCEEECCSSBCCTTTCBCCC
T ss_pred HhcCCcccccccccCCCEEeCCCCEEEECCEEEEEEECCCCCcccEEEEECCCcccccCCceEEEEcCccccCCCCCccC
Confidence 00 0011236789999999999999999999999999999998766 99999999865333 33
Q ss_pred ccCCCCCHHHHHHHHHHHhcCCCc-EEEcCCCCC
Q 009940 358 DITAGGNMTDYFQSTYKFLELSPH-ALIPMHGRV 390 (522)
Q Consensus 358 ~~~~~~~~~~~~~SL~~l~~l~~~-~ivPgHG~~ 390 (522)
+. +.++..++++|+++|.+++++ .|+||||..
T Consensus 187 d~-~~~d~~~~~~Sl~kl~~L~~~~~v~pgHg~~ 219 (298)
T 4efz_A 187 DF-PGGDARSLYRSIRKVLSLPPATRLYMCHDYQ 219 (298)
T ss_dssp CS-TTCCHHHHHHHHHHHTTSCTTCEEECSBCSC
T ss_pred CC-CCCCHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 33 467999999999999999998 699999965
No 34
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.91 E-value=3.3e-24 Score=204.67 Aligned_cols=154 Identities=23% Similarity=0.379 Sum_probs=120.4
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCC-CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC-------CC-
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-------DW- 300 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~-~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~-------~~- 300 (522)
++.+|||||... +.+.+.+++.+ ++++|++||.|.||+||+..+++.+ +++||+++.+.+.+... ..
T Consensus 22 ~~~iliD~G~~~---~~l~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~g~~ 97 (207)
T 2zwr_A 22 EGPVLIDPGDEP---EKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEAL-DLPVYLHPLDLPLYEGADLAARAWGLA 97 (207)
T ss_dssp TEEEEECCCSCH---HHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHHH-CCCEEECGGGHHHHHTHHHHHHHTTCC
T ss_pred CcEEEEeCCCCH---HHHHHHHHHcCCcccEEEECCCChHHHccHHHHHHHh-CCcEEECHHHHHHHhCchhhhhhcCCC
Confidence 458999999753 23444444433 4779999999999999999998876 89999999887766421 11
Q ss_pred ----CCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeCCCCEEEEcccccCCCCcccccCCCCCHHHHHHHHHHHh
Q 009940 301 ----SLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFL 376 (522)
Q Consensus 301 ----~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~~vLftGD~l~~~~~~~~~~~~~~~~~~~~~SL~~l~ 376 (522)
+.....+.+|+.+. .++++++||||+||+++++++.+++|+||+++....+..+. +.++..+|++|++++.
T Consensus 98 ~~~~~~~~~~~~~g~~i~----~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~-~~~~~~~~~~sl~~l~ 172 (207)
T 2zwr_A 98 IPKPPLPVRPLEEGMRLF----GFQVLHLPGHSPGHVAFYDPEGAQVFSGDLLFRGSVGRYDL-PGADPKALFASLKRLL 172 (207)
T ss_dssp CCCCCSCCEECCTTCEET----TEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEECCSSS-TTCCHHHHHHHHHHHT
T ss_pred CCcCCCCceEeCCCCEEE----EEEEEeCCCCCCCcEEEEECCCCEEEEecccCCCCcCCCCC-CCCCHHHHHHHHHHHh
Confidence 11345678888765 59999999999999999999889999999987653333322 4578999999999999
Q ss_pred cCCCc-EEEcCCCCCcC
Q 009940 377 ELSPH-ALIPMHGRVNL 392 (522)
Q Consensus 377 ~l~~~-~ivPgHG~~~~ 392 (522)
+++++ .|+||||++..
T Consensus 173 ~l~~~~~i~pgHg~~~~ 189 (207)
T 2zwr_A 173 SLPPETRVHPGHGPGTT 189 (207)
T ss_dssp TSCTTCEEEESBSCCEE
T ss_pred cCCCCCEEECCCCCCCc
Confidence 99887 69999999864
No 35
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.91 E-value=1.1e-23 Score=209.08 Aligned_cols=187 Identities=17% Similarity=0.206 Sum_probs=138.8
Q ss_pred ccceecCCeEEEEeccCCCCCCCccccEEEEccCCCCCCCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhCC----Cc
Q 009940 182 LSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLP----RK 257 (522)
Q Consensus 182 ~~~~evapGv~~v~~~~~~~~p~~~~N~~~i~~~~~~~g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~~----~i 257 (522)
+...++.+|+|++.. ...|+|++..+ ++.+|||||.... .+.+.+.+++.+ ++
T Consensus 21 ~~~~~v~~~v~~ig~--------~~~~~~li~~~--------------~~~iLID~G~~~~-~~~l~~~l~~~g~~~~~i 77 (269)
T 1sml_A 21 MAPLQIADHTWQIGT--------EDLTALLVQTP--------------DGAVLLDGGMPQM-ASHLLDNMKARGVTPRDL 77 (269)
T ss_dssp CCCEEEETTEEECSB--------TTBCCEEEEET--------------TEEEEECCBSGGG-HHHHHHHHHHTTCCGGGE
T ss_pred CCceeEeCCEEEecC--------CCcEEEEEEeC--------------CceEEEECCCCcc-HHHHHHHHHHcCCChHHC
Confidence 445788889888831 22456665543 4589999997643 334555555543 47
Q ss_pred cEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCC-----------CC--CCceecCCCceEEECCEEEEEEe
Q 009940 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD-----------WS--LGYTSVSGSEDICVGGQRLTVVF 324 (522)
Q Consensus 258 ~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~-----------~~--~~~~~l~~g~~l~lgg~~l~vi~ 324 (522)
++||+||.|.||+||+..|.+.+ +++||+++.+...+.... +. .....+.+|+.+.+|+.++++++
T Consensus 78 ~~IilTH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~ 156 (269)
T 1sml_A 78 RLILLSHAHADHAGPVAELKRRT-GAKVAANAESAVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVGGIVFTAHF 156 (269)
T ss_dssp EEEECSCCSHHHHTTHHHHHHHS-SCEEEECHHHHHHHHTTTCSBTTTBTSSCCCCCCCSEECCTTCEEEETTEEEEEEE
T ss_pred cEEEeCCCCccccCCHHHHHHhc-CCeEEECHHHHHHHhcCCccccccccccCCCCCCCCeEeCCCCEEEECCEEEEEEE
Confidence 79999999999999999998876 899999998877664321 01 12356889999999999999999
Q ss_pred CCCCCCCCeEEEeCC---CC--EEEEcccccCCCCcccccC-CCCCHHHHHHHHHHHhcCCCcEEEcCCCCCcC
Q 009940 325 SPGHTDGHVALLHAS---TN--SLIVGDHCVGQGSAVLDIT-AGGNMTDYFQSTYKFLELSPHALIPMHGRVNL 392 (522)
Q Consensus 325 tPGHT~g~i~l~~~~---~~--vLftGD~l~~~~~~~~~~~-~~~~~~~~~~SL~~l~~l~~~~ivPgHG~~~~ 392 (522)
+||||+||++++++. .+ .+++||+++..+....... ...+..+|.+|++++.++++++++||||.+..
T Consensus 157 ~pGHt~g~~~~~~~~~~~~~~~~l~~gD~l~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~l~~~H~~~~~ 230 (269)
T 1sml_A 157 MAGHTPGSTAWTWTDTRNGKPVRIAYADSLSAPGYQLQGNPRYPHLIEDYRRSFATVRALPCDVLLTPHPGASN 230 (269)
T ss_dssp CCSSSTTCEEEEEEEEETTEEEEEEECCCCCCTTCCCSSCTTCTTHHHHHHHHHHHHHTSCCSEEECSSGGGGT
T ss_pred CCCCCcccEEEEEecccCCceeEEEEeccccCCCcccccCCCCCcCHHHHHHHHHHHHcCCCCEEEeCCCCccc
Confidence 999999999999864 22 6777999875433322211 11247899999999999999999999998753
No 36
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.90 E-value=4.8e-23 Score=220.82 Aligned_cols=156 Identities=24% Similarity=0.325 Sum_probs=123.8
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCC-CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecC
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVS 308 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~-~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~ 308 (522)
++++|||||.... .+.+.+++.+ ++++|++||.|.||++|+..|++.+ +++||+++.+...+.....+.....+.
T Consensus 48 ~~~vlID~g~~~~---~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~-~a~v~~~~~~~~~~~~~~~~~~~~~~~ 123 (466)
T 3r2u_A 48 GEAMIIDPIRDLS---SYIRVADEEGLTITHAAETHIHADFASGIRDVAIKL-NANIYVSGESDDTLGYKNMPNHTHFVQ 123 (466)
T ss_dssp CEEEEESCCSCCH---HHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHH-CCEEEEECCSCTTTSCCSCCTTCEEEC
T ss_pred CEEEEEcCCCCHH---HHHHHHHHCCCeeeEEEECCCChhhhccHHHHHHhh-CCeEEECcchhhhhccccCCCCCEEeC
Confidence 4589999997654 3344444433 4779999999999999999999887 899999987655443222223567899
Q ss_pred CCceEEECCEEEEEEeCCCCCCCCeEEEeCCCC-------EEEEcccccCCCCcccccC-----CCC----CHHHHHHHH
Q 009940 309 GSEDICVGGQRLTVVFSPGHTDGHVALLHASTN-------SLIVGDHCVGQGSAVLDIT-----AGG----NMTDYFQST 372 (522)
Q Consensus 309 ~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~~-------vLftGD~l~~~~~~~~~~~-----~~~----~~~~~~~SL 372 (522)
+|+++.+|+.++++++|||||+||+++++++.+ ++|+||+++....+..+.+ +.+ +..++++||
T Consensus 124 ~g~~l~~g~~~l~vi~tPGHT~g~~~~~~~~~~~~~~~~~~lftGD~lf~~~~gr~dl~~~~~~~~g~~~~~~~~~~~Sl 203 (466)
T 3r2u_A 124 HNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPMGLFSGDFIFVGDIGRPDLLEKAVKVEGSSEIGAKQMFKSI 203 (466)
T ss_dssp TTCEEEETTEEEEEEECCSSSTTCEEEEEECGGGTCCSCCEEEEETTBCSSCBCCCCCCCGGGCCTTHHHHHHHHHHHHH
T ss_pred CCCEEEECCEEEEEEECCCCCCCCEEEEEcCCCccCCCceEEEECCcccCCCCCCcCccccccccCCCchHHHHHHHHHH
Confidence 999999999999999999999999999998654 9999999987665555433 112 378999999
Q ss_pred HHHhcCCCcE-EEcCCCC
Q 009940 373 YKFLELSPHA-LIPMHGR 389 (522)
Q Consensus 373 ~~l~~l~~~~-ivPgHG~ 389 (522)
++|.+++.++ |+||||.
T Consensus 204 ~kl~~L~~~~~v~PgHg~ 221 (466)
T 3r2u_A 204 ESIKDLPDYIQIWPGHGA 221 (466)
T ss_dssp HHHTTSCTTCEEEESBCT
T ss_pred HHHhcCCCCeEEECCCCC
Confidence 9999999885 9999994
No 37
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.89 E-value=1.1e-22 Score=200.28 Aligned_cols=155 Identities=21% Similarity=0.350 Sum_probs=119.7
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC-----------
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD----------- 298 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~----------- 298 (522)
++.+|||||...... .+ .. ..++++||+||.|.||+||+..+++.+ +++||+++.+...+...
T Consensus 29 ~~~iLiD~G~~~~~~-~l---~~-~~~i~~vi~TH~H~DH~gg~~~l~~~~-~~~i~~~~~~~~~l~~~~~~~~~~~~~~ 102 (261)
T 3adr_A 29 KLTVMIDAGVSNSIA-DF---SF-LDKLDYIVLTHLHIDHIGLLPELLQVY-KAKVLVKSGFKKYLTSEDGLKKLNESAE 102 (261)
T ss_dssp SCEEEECCCCTTCCC-CC---TT-CSCCCEEECSCCSGGGTTTHHHHHHHS-CCEEEEETTCTHHHHSHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCChh-hc---CC-CCCCcEEEECCCCccccCCHHHHHHHh-CCeEEECHHHHHHhcCchhHHHHHHHHH
Confidence 568999999875321 12 11 456789999999999999999999887 89999998665433210
Q ss_pred -----------C--CCC---CceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeCCCCEEEEcccccCCCCc--ccccC
Q 009940 299 -----------D--WSL---GYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSA--VLDIT 360 (522)
Q Consensus 299 -----------~--~~~---~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~~vLftGD~l~~~~~~--~~~~~ 360 (522)
. .+. ....+.+|+.+++||.+++++++||||+|+++++. ++++|+||+++..... .....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~~~~~~~~--~~~lf~GD~~~~~~~~~~~~~~~ 180 (261)
T 3adr_A 103 KVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHARHHMSVLV--DDFLFTGDSAGAYFNGVVIPTTP 180 (261)
T ss_dssp HHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEEEEEECTTSCTTCEEEEE--TTEEEEETSSCEEETTEEECCCC
T ss_pred HHHHHHHHHhcccccCCCccceEecCCCCEEEECCEEEEEEECCCCCCccEEEEE--CCEEEEcCcccccccccccCCCC
Confidence 0 111 23567899999999999999999999999999976 5899999997643211 11222
Q ss_pred CCCCHHHHHHHHHHHhcCCCcEEEcCCCCCcC
Q 009940 361 AGGNMTDYFQSTYKFLELSPHALIPMHGRVNL 392 (522)
Q Consensus 361 ~~~~~~~~~~SL~~l~~l~~~~ivPgHG~~~~ 392 (522)
+..+..+|.+|++++.++++++++||||.+..
T Consensus 181 ~~~~~~~~~~sl~~l~~l~~~~v~~~H~~~~~ 212 (261)
T 3adr_A 181 PVIDYKMYMESLKRQIELKPKVVGFAHGGLVS 212 (261)
T ss_dssp SCCCHHHHHHHHHHHHHTCCSEEEETTTEEEC
T ss_pred CCCCHHHHHHHHHHHHcCCCCEEEeCCCCccC
Confidence 44689999999999999999999999999876
No 38
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.88 E-value=9.9e-23 Score=218.73 Aligned_cols=156 Identities=25% Similarity=0.370 Sum_probs=121.3
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCC-CccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCC-CCCceec
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDW-SLGYTSV 307 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~-~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~-~~~~~~l 307 (522)
++.+|||||.... .+.+.+++.+ ++++|++||.|.||++|+..|++.+ +++||+++.+...+..... ......+
T Consensus 27 ~~~ilID~g~~~~---~~~~~l~~~~~~i~~Il~TH~H~DH~gg~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~ 102 (474)
T 3tp9_A 27 GEACVIDPARDVE---PYLLTAKREGLRIVAALETHIHADFVSGAREMADRA-GAAICVSDEGPPEWKSEYVKAYPHRLL 102 (474)
T ss_dssp CEEEEESCCSCCH---HHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHH-CCEEEEECCSCGGGCCGGGGGSSEEEE
T ss_pred CEEEEEcCCCChH---HHHHHHHHcCCeeEEEEcCcCchhhhCCHHHHHHHH-CCcEEEcCcchhhhcccccccccceEC
Confidence 4589999997753 3444444433 4679999999999999999999875 9999999877665533111 1234678
Q ss_pred CCCceEEECCEEEEEEeCCCCCCCCeEEEeCCC-------CEEEEcccccCCCCcccccCC-----CCC----HHHHHHH
Q 009940 308 SGSEDICVGGQRLTVVFSPGHTDGHVALLHAST-------NSLIVGDHCVGQGSAVLDITA-----GGN----MTDYFQS 371 (522)
Q Consensus 308 ~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~-------~vLftGD~l~~~~~~~~~~~~-----~~~----~~~~~~S 371 (522)
.+|+.+.+|+.++++++|||||+||++|++++. +++|+||++|....+..+.+. .++ ..++++|
T Consensus 103 ~~g~~~~~g~~~i~~i~tPGHt~g~~~~~~~~~~~~~~~~~~lftGD~lf~~~~g~~dl~~~~~~~~~~~~~~~~~~~~s 182 (474)
T 3tp9_A 103 KDGDELHFGNVRIVVMHTPGHTPEHVSYLLYDGKTSPDVPMALFSGDFVFVGDVGRPDLLERVAGESGSSEALARQMFRS 182 (474)
T ss_dssp CTTCEEEETTEEEEEEECCSSSSSCEEEEEEETTTEEEEEEEEEEETSEETTEECCSCHHHHHSCCTTHHHHHHHHHHHH
T ss_pred CCCCEEEECCEEEEEEECCCCCCCCEEEEEecCCCCCCCceEEEeCCccccCCCCCCCCCccccCCCccchHHHHHHHHH
Confidence 999999999999999999999999999998654 699999999876554433211 222 6899999
Q ss_pred HHHHhcCCCcE-EEcCCCC
Q 009940 372 TYKFLELSPHA-LIPMHGR 389 (522)
Q Consensus 372 L~~l~~l~~~~-ivPgHG~ 389 (522)
|+++..++.++ |+||||.
T Consensus 183 l~~l~~l~~~~~v~PgHg~ 201 (474)
T 3tp9_A 183 LRKFEALPDHVQVLPAHGA 201 (474)
T ss_dssp HHHHHTSCTTCEEEESBCT
T ss_pred HHHHhcCCCCcEEECCCCC
Confidence 99999998886 7899994
No 39
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.86 E-value=3.2e-22 Score=196.49 Aligned_cols=156 Identities=17% Similarity=0.203 Sum_probs=114.1
Q ss_pred CCeEEEcCCCCCh--------------------------HHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhCCCC
Q 009940 230 GEALIVDPGCRSE--------------------------FHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDA 283 (522)
Q Consensus 230 g~~iLIDtG~~~~--------------------------~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a 283 (522)
++.+|||||.... ..+.+.+...+..++++||+||.|.||+||+..| +++
T Consensus 48 ~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~l~~~g~~~~~I~~VilTH~H~DH~gg~~~~----~~~ 123 (254)
T 3dha_A 48 EGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHAGGNGAF----TNT 123 (254)
T ss_dssp TEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGSHHHHHHHHTCCGGGCSEEECSCCSHHHHTTGGGC----SSS
T ss_pred CccEEEECCCChhhhcccccccccccccccccccCchhhHHHHHHHcCCCHHHCCEEEcCCChhhcCCChHHC----CCC
Confidence 4589999997632 2333333333333478999999999999999876 589
Q ss_pred EEEEcHhHHHHhccCC-------CCCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeCCC---CEEEEcccccCCC
Q 009940 284 ILLAHENTMRRIGKDD-------WSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHAST---NSLIVGDHCVGQG 353 (522)
Q Consensus 284 ~V~a~~~~~~~l~~~~-------~~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~---~vLftGD~l~~~~ 353 (522)
+||+++.+.+.+.... .......+.+++...+++ ++++++||||+|+++++++.. +++|+||+++...
T Consensus 124 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~pGHt~g~~~~~~~~~~~~~vl~~GD~~~~~~ 201 (254)
T 3dha_A 124 PIIVQRTEYEAALHREEYMKECILPHLNYKIIEGDYEVVPG--VQLLYTPGHSPGHQSLFIETEQSGSVLLTIDASYTKE 201 (254)
T ss_dssp CEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEECSSEEEETT--EEEEECCSSSTTCEEEEEEETTTEEEEEEETTCSSHH
T ss_pred EEEECHHHHHHhhccccccccccCcccceEEecCCccccCC--EEEEECCCCCCCCEEEEEEeCCCCEEEEEecccchhh
Confidence 9999998887664321 111123344667777777 889999999999999999754 6999999987643
Q ss_pred Ccccc-cCCCCCHHHHHHHHHHHhcCCCc---EEEcCCCCCc
Q 009940 354 SAVLD-ITAGGNMTDYFQSTYKFLELSPH---ALIPMHGRVN 391 (522)
Q Consensus 354 ~~~~~-~~~~~~~~~~~~SL~~l~~l~~~---~ivPgHG~~~ 391 (522)
..... ..+..+..++++|+++|.++..+ .|+||||+..
T Consensus 202 ~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~~~v~pgHg~~~ 243 (254)
T 3dha_A 202 NFEDEVPFAGFDPELALSSIKRLKEVVKKEKPIIFFGHDIEQ 243 (254)
T ss_dssp HHHSCCCCSCSCHHHHHHHHHHHHHHHHHHCCEEEESSCHHH
T ss_pred hcccCCCcCcCCHHHHHHHHHHHHHHHHhcCCEEEeCCCHHH
Confidence 22221 12456999999999999998665 8999999853
No 40
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.84 E-value=1.7e-21 Score=193.45 Aligned_cols=155 Identities=21% Similarity=0.290 Sum_probs=111.0
Q ss_pred CCeEEEcCCCCChH--------------HHHHHHHHHhC----CCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhH
Q 009940 230 GEALIVDPGCRSEF--------------HEELLKVVASL----PRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENT 291 (522)
Q Consensus 230 g~~iLIDtG~~~~~--------------~~~L~~~~~~~----~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~ 291 (522)
++.+|||||..... .+.+.+.+++. .++++||+||.|.||+||+..| ++++||+++.+
T Consensus 44 ~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~----~~a~v~~~~~~ 119 (274)
T 3aj3_A 44 EGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYF----PHAKKICHRSE 119 (274)
T ss_dssp TEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGC----TTSEEEEETTH
T ss_pred CccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhC----CCCEEEECHHH
Confidence 45899999987642 12344444443 3477999999999999999877 68999999988
Q ss_pred HHHhccCC-----------C---------------------CCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeC-
Q 009940 292 MRRIGKDD-----------W---------------------SLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA- 338 (522)
Q Consensus 292 ~~~l~~~~-----------~---------------------~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~- 338 (522)
.+.+.... + ...+..+++ .++++| +++++++||||+|+++++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~g-~~~v~~~pGHt~g~~~~~~~~ 196 (274)
T 3aj3_A 120 VPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFEGIDG--DVDLAR-GVKLISTPGHSIGHYSLLVEF 196 (274)
T ss_dssp HHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCEEEECS--SEEEET-TEEEEECTTSSTTCEEEEECC
T ss_pred HHHHhCcCCccccccChhhhccccccccccccccccccccCCCCceEcCC--ccccCC-EEEEEECCCCCceeeEEEEEC
Confidence 77553211 0 112233432 466777 79999999999999999997
Q ss_pred --CCCEEEEcccccCCCCcc-ccc-CCCCCHHHHHHHHHHHhcCCCc---EEEcCCCCCc
Q 009940 339 --STNSLIVGDHCVGQGSAV-LDI-TAGGNMTDYFQSTYKFLELSPH---ALIPMHGRVN 391 (522)
Q Consensus 339 --~~~vLftGD~l~~~~~~~-~~~-~~~~~~~~~~~SL~~l~~l~~~---~ivPgHG~~~ 391 (522)
+.+++|+||+++...... ... ....+..+|.+|++++.++..+ .|+||||++.
T Consensus 197 ~~~~~~lf~GD~~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~~~i~pgH~~~~ 256 (274)
T 3aj3_A 197 PRRKPILFTIDAAYTQKSLETLCQAAFHIDPVAGVNSMRKVKKLAEDHGAELMYSHDMDN 256 (274)
T ss_dssp SSSCCEEEEETTCSSHHHHHHTCCCSCCSCHHHHHHHHHHHHHHHHHHTCEEEESSCHHH
T ss_pred CCCCEEEEEechhhhHHHhcCCCCCceecCHHHHHHHHHHHHHHHhcCCCEEEecCCHHH
Confidence 458999999876432111 111 1246889999999999887543 8999999863
No 41
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.84 E-value=2.8e-21 Score=192.98 Aligned_cols=159 Identities=14% Similarity=0.110 Sum_probs=113.8
Q ss_pred CCeEEEcCCCCChH-------------HHHHHHHHHh----CCCccEEEEcCCCccccCCHHHHHH--hCCCCEEEEcHh
Q 009940 230 GEALIVDPGCRSEF-------------HEELLKVVAS----LPRKLIVFVTHHHRDHVDGLSIIQK--CNPDAILLAHEN 290 (522)
Q Consensus 230 g~~iLIDtG~~~~~-------------~~~L~~~~~~----~~~i~~IiiTH~H~DHiGG~~~l~~--~~p~a~V~a~~~ 290 (522)
++.+|||||..... ...+.+.+++ ..++++|++||.|.||+||+..+.+ .+|+++||+++.
T Consensus 57 ~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~~~fp~a~i~~~~~ 136 (280)
T 3esh_A 57 QYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQD 136 (280)
T ss_dssp SCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCCSSTTCEEEEEHH
T ss_pred CEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccccCCCCCEEEECHH
Confidence 56999999976520 1123333443 3467799999999999999999887 778999999999
Q ss_pred HHHHhccCCCC--------------CCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeC--CCCEEEEcccccCCCC
Q 009940 291 TMRRIGKDDWS--------------LGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA--STNSLIVGDHCVGQGS 354 (522)
Q Consensus 291 ~~~~l~~~~~~--------------~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~--~~~vLftGD~l~~~~~ 354 (522)
+...+...... .....+.++..+ .+ .++++++||||+||++++++ +.+++|+||+++....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~-gi~~~~~pGHt~g~~~~~i~~~~~~vlftGD~~~~~~~ 213 (280)
T 3esh_A 137 EWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEP--VP-GIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAH 213 (280)
T ss_dssp HHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESSEECS--ST-TEEEEECCSSSTTCEEEEEEETTEEEEECGGGSCSGGG
T ss_pred HHHHhhCcccccccchhhhhhhhhhheEEEeCCCCeE--cC-CEEEEEcCCCCcccEEEEEEECCcEEEEEEccCCchhh
Confidence 98876543211 011233333333 22 38899999999999999994 4569999999987654
Q ss_pred cccccC--CCCCHHHHHHHHHHHhcC---CCcEEEcCCCCCc
Q 009940 355 AVLDIT--AGGNMTDYFQSTYKFLEL---SPHALIPMHGRVN 391 (522)
Q Consensus 355 ~~~~~~--~~~~~~~~~~SL~~l~~l---~~~~ivPgHG~~~ 391 (522)
...+.+ ++.+..+..++.+++.++ +...|+||||+..
T Consensus 214 ~~~d~~~~~d~d~~~~~~s~~~ll~~~~~~~~~v~pgH~~~~ 255 (280)
T 3esh_A 214 KNPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENY 255 (280)
T ss_dssp CSTTCCCTTCSCHHHHHHHHHHHHHHHHHTTCEEECSSCSSE
T ss_pred cCCCccccccCCHHHHHHHHHHHHHHHHhCCCEEEEEccCCC
Confidence 433332 345788888898888764 4567999999875
No 42
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.83 E-value=3.4e-21 Score=197.50 Aligned_cols=165 Identities=18% Similarity=0.243 Sum_probs=117.6
Q ss_pred ceEEEec--CCeEEEcCCCCC-------hHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHH-HHhCCCCEEEEcHhHH
Q 009940 223 NHRFVAQ--GEALIVDPGCRS-------EFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSII-QKCNPDAILLAHENTM 292 (522)
Q Consensus 223 ~~~~l~~--g~~iLIDtG~~~-------~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l-~~~~p~a~V~a~~~~~ 292 (522)
.++|++. ++.||||||.+. ...+.+.+...+..++++||+||.|.||+||+..+ +..+|+++||+++.+.
T Consensus 97 ~n~~LI~~~~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~~~fp~a~v~~~~~~~ 176 (331)
T 1p9e_A 97 VTGYLVNTGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQLAFPNAVVRADQKEA 176 (331)
T ss_dssp EEEEEEECSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEESSTTCEEECBHHHH
T ss_pred EEEEEEEECCEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccccccCCCCEEEECHHHH
Confidence 4455553 458999999773 23334443333334678999999999999999843 3457899999999987
Q ss_pred HHhccCC----C---------------------CCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeC--CCCEEEE
Q 009940 293 RRIGKDD----W---------------------SLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA--STNSLIV 345 (522)
Q Consensus 293 ~~l~~~~----~---------------------~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~--~~~vLft 345 (522)
+.+.... . ......+++|+++..| ++++++||||+||++++++ +.+++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~g---i~vi~tpGHtpG~~~~~i~~~~~~vlf~ 253 (331)
T 1p9e_A 177 DFWLSQTNLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLVPG---IKALASHGHTPGHTTYVVESQGQKLALL 253 (331)
T ss_dssp HHHSCHHHHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECSTT---EEEEECTTSSTTCEEEEEEETTEEEEEC
T ss_pred HHHhCchhhccCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEccc---EEEEEcCCCChhCEEEEEEECCcEEEEE
Confidence 7654211 0 1123456677766543 9999999999999999996 5689999
Q ss_pred cccccCCC----CcccccCCCCCHHHHHHHHHHHhcC---CCcEEEcCCCCC
Q 009940 346 GDHCVGQG----SAVLDITAGGNMTDYFQSTYKFLEL---SPHALIPMHGRV 390 (522)
Q Consensus 346 GD~l~~~~----~~~~~~~~~~~~~~~~~SL~~l~~l---~~~~ivPgHG~~ 390 (522)
||+++... .+.+...++.+..++++|++++++. +...|+|+|++.
T Consensus 254 GD~~~~~~~~~~~p~~~~~~d~d~~~~~~s~~~ll~~~~~~~~~v~~~H~~~ 305 (331)
T 1p9e_A 254 GDLILVAAVQFDDPSVTTQLDSDSKSVAVERKKAFADAAKGGYLIAASHLSF 305 (331)
T ss_dssp TTSCCCHHHHTTCTTCCBTTCSSHHHHHHHHHHHHHHHHHHTCEEECTTSST
T ss_pred ECccCcchhcccCCCceecccCCHHHHHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 99986541 1222223467999999999998764 456899999974
No 43
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.82 E-value=3.1e-20 Score=184.38 Aligned_cols=156 Identities=17% Similarity=0.262 Sum_probs=113.0
Q ss_pred CCeEEEcCCCCChHH---------------------HHHHHHHHhC----CCccEEEEcCCCccccCCHHHHHHhCCCCE
Q 009940 230 GEALIVDPGCRSEFH---------------------EELLKVVASL----PRKLIVFVTHHHRDHVDGLSIIQKCNPDAI 284 (522)
Q Consensus 230 g~~iLIDtG~~~~~~---------------------~~L~~~~~~~----~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~ 284 (522)
++.+|||||...... +.+.+.+++. .++++||+||.|.||+||+..| ++++
T Consensus 52 ~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~----~~~~ 127 (276)
T 2r2d_A 52 DATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYF----GKSR 127 (276)
T ss_dssp SCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGGGC----SSSE
T ss_pred CCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCChhhC----CCCE
Confidence 458999999775421 2233333333 3578999999999999999987 6899
Q ss_pred EEEcHhHHHHhccC--------CC-----------CCCceecC-CCceEEECCEEEEEEeC-CCCCCCCeEEEeC--C-C
Q 009940 285 LLAHENTMRRIGKD--------DW-----------SLGYTSVS-GSEDICVGGQRLTVVFS-PGHTDGHVALLHA--S-T 340 (522)
Q Consensus 285 V~a~~~~~~~l~~~--------~~-----------~~~~~~l~-~g~~l~lgg~~l~vi~t-PGHT~g~i~l~~~--~-~ 340 (522)
||+++.+.+.+... .+ ...+..+. +|+.+++++ .++++++ ||||+||++++++ + .
T Consensus 128 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~-~~~v~~~~pgHt~g~~~~~~~~~~~~ 206 (276)
T 2r2d_A 128 LIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAP-GVNLLNFGTGHASGMLGLAVRLEKQP 206 (276)
T ss_dssp EEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEET-TEEEEEEESSSSSSEEEEEEECSSSC
T ss_pred EEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEecC-CEEEEeCCCCCCceeEEEEEEcCCCc
Confidence 99999887654211 00 12344566 488899874 2899999 9999999999996 3 6
Q ss_pred CEEEEcccccCCCC--c-ccccCCCCCHHHHHHHHHHHhcC---CCcEEEcCCCCC
Q 009940 341 NSLIVGDHCVGQGS--A-VLDITAGGNMTDYFQSTYKFLEL---SPHALIPMHGRV 390 (522)
Q Consensus 341 ~vLftGD~l~~~~~--~-~~~~~~~~~~~~~~~SL~~l~~l---~~~~ivPgHG~~ 390 (522)
+++|+||+++.... . ........+..++.+|++++.++ ....++||||++
T Consensus 207 ~vl~~GD~~~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~~~v~~~H~~~ 262 (276)
T 2r2d_A 207 GFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDRE 262 (276)
T ss_dssp EEEEEETTSCCHHHHSSSCCCCSSCSCHHHHHHHHHHHHHHHHHTTCEEEESSCHH
T ss_pred eEEEEechhhhHHHhcccCCCCccccCHHHHHHHHHHHHHHHhcCCCEEEeCCCHH
Confidence 89999999865421 1 11111345789999999999987 466999999975
No 44
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.81 E-value=6.2e-21 Score=184.09 Aligned_cols=147 Identities=22% Similarity=0.242 Sum_probs=106.4
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhC----CCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHH-hccC------
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASL----PRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRR-IGKD------ 298 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~----~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~-l~~~------ 298 (522)
++.+|||||..... +.+.+.+++. .++++|++||.|.||+||+..|. +++||+++..... +...
T Consensus 44 ~~~iLID~G~~~~~-~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~ 118 (221)
T 1ztc_A 44 DRRIIIDPGNLSSM-DELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLFE----NATFYVHEVYKTKNYLSFGTIVGR 118 (221)
T ss_dssp TEEEEECCCCGGGH-HHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGCT----TCEEEEEGGGGGSCGGGGCHHHHH
T ss_pred CeEEEEECCCCcch-HHHHHHHHHcCCCHHHCcEEEEcCCccccCCchhhCC----CCEEEEeHHHhhhhhhhhccchhh
Confidence 45899999985322 2333333332 35679999999999999998773 7899999872111 0000
Q ss_pred ------CCCCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeCCC---CEEEEcccccCCCCcccccCCCCCHHHHH
Q 009940 299 ------DWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHAST---NSLIVGDHCVGQGSAVLDITAGGNMTDYF 369 (522)
Q Consensus 299 ------~~~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~---~vLftGD~l~~~~~~~~~~~~~~~~~~~~ 369 (522)
........+++++.+. ++ .++++++||||+|+++++++.. +++|+||+++.... ..+..+|+
T Consensus 119 ~~~~~~~~~~~~~~~~~g~~l~-~~-~~~v~~~pGHt~g~~~~~~~~~~~~~vlftGD~~~~~~~-------~~d~~~~~ 189 (221)
T 1ztc_A 119 IYSKVISSWKNVVLLKGEESLF-DE-KVKVFHTPWHAREHLSFLLDTENAGRVLITGDITPNRLS-------YYDIIKGY 189 (221)
T ss_dssp HHHHHHHTCCSEEEECSCCEET-TT-TEEEEECCSSSTTCEEEEEEETTTEEEEECGGGSCSHHH-------HHHHHHTC
T ss_pred hhhhccccccceEEeCCCCEEE-CC-eEEEEEcCCCCcccEEEEEEcCCCCeEEEEeCccccccc-------CCCHHHHH
Confidence 0012345677888775 43 6999999999999999998754 79999999864432 23677888
Q ss_pred HH------HHHHhcCCCcEEEcCCCCCcC
Q 009940 370 QS------TYKFLELSPHALIPMHGRVNL 392 (522)
Q Consensus 370 ~S------L~~l~~l~~~~ivPgHG~~~~ 392 (522)
+| |++ .++ +++|+||||+++.
T Consensus 190 ~s~~~~~~l~~-~~l-~~~i~pgHg~~~~ 216 (221)
T 1ztc_A 190 GSVQVKNFLDR-VGR-IDLLVFPHDAPLK 216 (221)
T ss_dssp SCHHHHHHHHH-HCC-CSEEECSSSCCBC
T ss_pred hhhHhHHHHHh-ccC-CCEEEeCCCchHh
Confidence 88 999 887 8999999999864
No 45
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.71 E-value=3.7e-18 Score=165.84 Aligned_cols=145 Identities=12% Similarity=0.143 Sum_probs=113.2
Q ss_pred hhhcCCCCC-ceeEEeecCCCCCCCccccccccccccCCCCccccccccCC------------C---------C------
Q 009940 8 LILKNPLND-SEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGE------------K---------S------ 59 (522)
Q Consensus 8 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~------------~---------~------ 59 (522)
+++++..+| .|+||.||+...+|+.+ .|.||+++++..+.. . +
T Consensus 14 ill~~~~~g~~~vLl~~R~~~~~~~~g---------~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~ 84 (232)
T 3qsj_A 14 VVIRDGANKDIEVLVVRRAKTMRFLPG---------FVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETA 84 (232)
T ss_dssp EEEEECGGGCEEEEEEEECTTCSSSTT---------CEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCeEEEEEEccCCCCCCCC---------cEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHH
Confidence 345654455 89999999999999888 999999999987642 0 0
Q ss_pred -CCceeeecccc----cccc--------ccchhchHHHHHHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcC
Q 009940 60 -EPTISIQGSEK----INLG--------KFDIESALNQILEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLL 126 (522)
Q Consensus 60 -~~~~~~~~~~~----~~~~--------~~~~~~~~~~~l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p 126 (522)
|.||.+.+... .+.. -.+...+|.++|+++|+.++.+.|.+|+|||||+ +.+|||||+||++.+|
T Consensus 85 EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~--~~~rRfdT~FFla~lp 162 (232)
T 3qsj_A 85 EEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPP--TQPVRFDTRFFLCVGQ 162 (232)
T ss_dssp HHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCT--TSSSEEEEEEEEEECS
T ss_pred HHhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCc--CCceeEEEEEEEEECC
Confidence 56777765321 1211 1234569999999999999999999999999999 8899999999999998
Q ss_pred CC-----CCCcccccccccHHHHHHHHHhcCCCCCccchhhhhhh
Q 009940 127 DG-----NQILQEGCKWMSTQSCINCLAEVKPSTDRVGPLVVIGL 166 (522)
Q Consensus 127 ~~-----~~~e~~~~~W~~~~~al~~l~~~~~~~~r~g~~~~~gl 166 (522)
.. +++|..++.|++|+++++... .+...+-|++..-|
T Consensus 163 q~~~v~~d~~E~~~~~W~~p~eal~~~~---~G~i~L~pPT~~~L 204 (232)
T 3qsj_A 163 HLGEPRLHGAELDAALWTPARDMLTRIQ---SGELPAVRPTIAVL 204 (232)
T ss_dssp SCCCCCCCSSSEEEEEEEEHHHHHHHHH---TTSSCCCHHHHHHH
T ss_pred CCCCCCCCCCceEEEEEEcHHHHHHHHH---cCCceechhHHHHH
Confidence 53 679999999999999998654 44455566665553
No 46
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.61 E-value=2.8e-15 Score=148.19 Aligned_cols=167 Identities=14% Similarity=0.091 Sum_probs=113.2
Q ss_pred ceEEEe--cCCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHh----------CCCCEEEEcHh
Q 009940 223 NHRFVA--QGEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKC----------NPDAILLAHEN 290 (522)
Q Consensus 223 ~~~~l~--~g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~----------~p~a~V~a~~~ 290 (522)
+++|++ ++..+|||||.+.. ..+.+. ....++++|++||.|.||++|+..+.+. .++++||+++.
T Consensus 43 ~~~~li~~~~~~iLiD~G~~~~--~~l~~~-~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~ 119 (268)
T 1zkp_A 43 TSGYLFEHDGFRLLVDCGSGVL--AQLQKY-ITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTF 119 (268)
T ss_dssp BSEEEEEETTEEEEECCCTTHH--HHHTTT-CCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSS
T ss_pred ccEEEEEECCcEEEEECCHHHH--HHHHHh-CCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEEeCcc
Confidence 344444 25589999998632 233332 2334577999999999999999988653 24789999998
Q ss_pred HHHHhccCCCC--CCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeCC--CCEEEEcccccCCCCc---------cc
Q 009940 291 TMRRIGKDDWS--LGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHAS--TNSLIVGDHCVGQGSA---------VL 357 (522)
Q Consensus 291 ~~~~l~~~~~~--~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~--~~vLftGD~l~~~~~~---------~~ 357 (522)
+.+.+....+. .....+.+|+.+++|+.+++++++| |++|+++|+++. .+++|+||+.+..... ..
T Consensus 120 ~~~~l~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~~-H~~~~~~~~i~~~~~~i~~~GD~~~~~~~~~~~~~~d~li~ 198 (268)
T 1zkp_A 120 DENGFHSLTHEPHTKGIPYNPEETLQIGPFSISFLKTV-HPVTCFAMRITAGNDIVVYSADSSYIPEFIPFTKDADLFIC 198 (268)
T ss_dssp SHHHHHTTCBTTTEEEEECCTTSCEEETTEEEEEEECC-SSSCCEEEEEEETTEEEEECCSCCCCTTHHHHHTTCSEEEE
T ss_pred HHHHHHhcccCCccceEEecCCCeEEECCEEEEEEECC-CCCCceEEEEEECCeEEEEeCCCCCCHHHHHHHcCCCEEEE
Confidence 87777654321 2345688899999999999999998 999999999853 5799999997643211 00
Q ss_pred ccCCCC---C----HHHHHHHHHHHhcCCCcEEEcCCCCCcCC
Q 009940 358 DITAGG---N----MTDYFQSTYKFLELSPHALIPMHGRVNLW 393 (522)
Q Consensus 358 ~~~~~~---~----~~~~~~SL~~l~~l~~~~ivPgHG~~~~~ 393 (522)
+..+.. . -....++++.+...+++.+++.|-.+..+
T Consensus 199 e~~~~~~~~~~~~~H~~~~~a~~~~~~~~~~~lil~H~~~~~~ 241 (268)
T 1zkp_A 199 ECNMYAHQEAAKAGHMNSTEVASIAKDANVKELLLTHLPHTGN 241 (268)
T ss_dssp ECCBCTTSCCGGGTCCBHHHHHHHHHHTTCSEEEEESBCSSSC
T ss_pred ECCCCccccccCCCCCCHHHHHHHHHHcCCCEEEEECCCCCCC
Confidence 111000 0 01223344445567889999999877533
No 47
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.57 E-value=7.6e-15 Score=160.13 Aligned_cols=123 Identities=13% Similarity=0.192 Sum_probs=95.1
Q ss_pred cCCeEEEcCCCCChHHH---------HHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC-
Q 009940 229 QGEALIVDPGCRSEFHE---------ELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD- 298 (522)
Q Consensus 229 ~g~~iLIDtG~~~~~~~---------~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~- 298 (522)
+++.+|||||....... .+..+.....++++||+||.|.||+||+..+.+.+ +++||+++.+...+...
T Consensus 30 ~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l~~~~-~~pIy~t~~t~~ll~~~l 108 (555)
T 3zq4_A 30 QDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQV-NIPVYGGKLAIGLLRNKL 108 (555)
T ss_dssp TTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHHHTTC-CCCEEECHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHHHHhc-CceEEECHHHHHHHHHHH
Confidence 45689999997422110 12233345567889999999999999999998876 88999999887655321
Q ss_pred ---C--CCCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEe--CCCCEEEEcccccCC
Q 009940 299 ---D--WSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLH--ASTNSLIVGDHCVGQ 352 (522)
Q Consensus 299 ---~--~~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~--~~~~vLftGD~l~~~ 352 (522)
. .......+..|+.+.+|+.+++++++++|++|++++++ ++.+++|+||+.+..
T Consensus 109 ~~~~~~~~~~~~~v~~g~~~~ig~~~v~~~~~~H~~pgs~~~~i~~~~~~il~tGD~~~~~ 169 (555)
T 3zq4_A 109 EEHGLLRQTKLNIIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDF 169 (555)
T ss_dssp HHHSTTTTCCEEECCTTCCEEETTEEEEEEEEBCSSSSEEEEEEEETTEEEEECCSCBCCS
T ss_pred HHcCccCCCceEEeCCCCEEEECCEEEEEEeCCCCCcCcEEEEEEECCcEEEEeCCCCCCC
Confidence 1 12356788999999999999999999999999988877 667899999998643
No 48
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.53 E-value=3.5e-14 Score=155.31 Aligned_cols=124 Identities=15% Similarity=0.157 Sum_probs=94.1
Q ss_pred cCCeEEEcCCCCChHH---------HHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhCC----CCEEEEcHhHHHHh
Q 009940 229 QGEALIVDPGCRSEFH---------EELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNP----DAILLAHENTMRRI 295 (522)
Q Consensus 229 ~g~~iLIDtG~~~~~~---------~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p----~a~V~a~~~~~~~l 295 (522)
+++.+|||||...... ..+..+.....++++||+||.|.||+||+..+.+.++ +++||+++.+...+
T Consensus 38 ~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~~~~~~~~pIy~~~~t~~~l 117 (562)
T 3bk2_A 38 RDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMIFGKESPVPIYGARLTLGLL 117 (562)
T ss_dssp TTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHHHHHHHHCSCCCSEEEEEHHHHHHH
T ss_pred CCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCHHHHHHhhccccCCceEEeCHHHHHHH
Confidence 4568999999642110 0122233345567899999999999999999988764 79999999887655
Q ss_pred cc----CCC---CCCceecCCCceEEECC-EEEEEEeCCCCCCCCeEEEe--CCCCEEEEcccccCC
Q 009940 296 GK----DDW---SLGYTSVSGSEDICVGG-QRLTVVFSPGHTDGHVALLH--ASTNSLIVGDHCVGQ 352 (522)
Q Consensus 296 ~~----~~~---~~~~~~l~~g~~l~lgg-~~l~vi~tPGHT~g~i~l~~--~~~~vLftGD~l~~~ 352 (522)
.. ... ......+..|+.+++|+ .+++++++++|++|++++++ ++.+++|+||+.+..
T Consensus 118 ~~~l~~~~~~~~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~gs~~~~i~~~~~~il~tGD~~~~~ 184 (562)
T 3bk2_A 118 RGKLEEFGLRPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTPIGTIVHTGDFKLDP 184 (562)
T ss_dssp HHHHHHTTCCSTTSEEEEECTTCEEEETTTEEEEEEECCCSSSSCEEEEEEETTEEEEECCSCCCCS
T ss_pred HHHHHHcCCCcCCceEEEECCCCEEEeCCCEEEEEEECCCCCcccEEEEEEECCeEEEEcCCCCCCC
Confidence 32 111 23456788999999999 99999999999999999986 566899999997643
No 49
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.48 E-value=2.5e-13 Score=143.84 Aligned_cols=159 Identities=17% Similarity=0.142 Sum_probs=107.0
Q ss_pred cCCeEEEcCCCCChHH--HHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC--------
Q 009940 229 QGEALIVDPGCRSEFH--EELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-------- 298 (522)
Q Consensus 229 ~g~~iLIDtG~~~~~~--~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~-------- 298 (522)
++..+|||||...... ..+........++++|++||.|.||+||+..+.+..++++||+++.+.+.+...
T Consensus 22 ~~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~~~~~~Iy~t~~t~~l~~~~l~d~~~~~ 101 (431)
T 3iek_A 22 GGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVLLMEIVLEDALKVM 101 (431)
T ss_dssp TTEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHcCCCCeEEEcHHHHHHHHHHHHHHHhhc
Confidence 4568999999854320 001111112235679999999999999999998876689999999887654310
Q ss_pred ---CCC--------CCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeC--CCCEEEEcccccCCCCcc--------c
Q 009940 299 ---DWS--------LGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA--STNSLIVGDHCVGQGSAV--------L 357 (522)
Q Consensus 299 ---~~~--------~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~--~~~vLftGD~l~~~~~~~--------~ 357 (522)
.+. .....+..++.+++++.+++++++ ||++|++++++. +.+++|+||+-....... .
T Consensus 102 ~~~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~a-gH~~Gs~~~~i~~~~~~ilfsGD~~~~~~~~l~~~~~~~~~ 180 (431)
T 3iek_A 102 DEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQA-GHLPGSAFVVAQGEGRTLVYSGDLGNREKDVLPDPSLPPLA 180 (431)
T ss_dssp SSCSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEEC-CSSTTCEEEEEEETTEEEEECCCCCCTTSSSSCCCCBCCCC
T ss_pred ccCCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeC-CCCcCceEEEEEECCEEEEEeCCCCCCCCcccCCccccCCc
Confidence 011 135678889999999999988875 999999999884 346999999864322110 0
Q ss_pred -----ccCC----CCC----HHHHHHHHHHHhcCCCcEEEcCCC
Q 009940 358 -----DITA----GGN----MTDYFQSTYKFLELSPHALIPMHG 388 (522)
Q Consensus 358 -----~~~~----~~~----~~~~~~SL~~l~~l~~~~ivPgHG 388 (522)
+..+ ..+ ..+..+.+++..+....+++|.+.
T Consensus 181 D~LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~~gg~vlIp~fa 224 (431)
T 3iek_A 181 DLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFA 224 (431)
T ss_dssp SEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred cEEEEEcccCCcCCCChHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 0001 112 334555666666667788999886
No 50
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.46 E-value=5.8e-13 Score=147.74 Aligned_cols=165 Identities=18% Similarity=0.152 Sum_probs=108.4
Q ss_pred ceEEEe--cCCeEEEcCCCCChH---HHHHHHH---HHhCCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHH
Q 009940 223 NHRFVA--QGEALIVDPGCRSEF---HEELLKV---VASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRR 294 (522)
Q Consensus 223 ~~~~l~--~g~~iLIDtG~~~~~---~~~L~~~---~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~ 294 (522)
.++|++ ++..+|||||..... ...+..+ .....++++|++||.|.||+||+..+.+..++++||+++.+...
T Consensus 193 ~s~~lI~~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~~~~~~Iy~t~~t~~l 272 (636)
T 2ycb_A 193 RSCLYLQTPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDL 272 (636)
T ss_dssp CCEEEEECSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHTTCCSCEEECHHHHHH
T ss_pred CCEEEEEECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhcCCCCeEEEcchHHHH
Confidence 344444 356899999987542 1111111 12345678999999999999999999874458999999987654
Q ss_pred hcc---------------CCCC--------CCceecCCCceEEE-CCEEEEEEeCCCCCCCCeEEEeC--CC--CEEEEc
Q 009940 295 IGK---------------DDWS--------LGYTSVSGSEDICV-GGQRLTVVFSPGHTDGHVALLHA--ST--NSLIVG 346 (522)
Q Consensus 295 l~~---------------~~~~--------~~~~~l~~g~~l~l-gg~~l~vi~tPGHT~g~i~l~~~--~~--~vLftG 346 (522)
+.. ..+. .....+..|+.+++ ++.+++++ .+||++|++++++. +. +++|+|
T Consensus 273 ~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~-~~gH~~Gs~~~~i~~~~~~~~ilftG 351 (636)
T 2ycb_A 273 MTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLH-NAGHILGSAMAHLHIGDGQHNMVYTG 351 (636)
T ss_dssp HHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEE-ECCSSTTCEEEEEEETTTTTCEEECC
T ss_pred HHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEe-CCCCCCCcEEEEEEECCCeEEEEEEC
Confidence 321 0111 02356888999999 99888885 68999999999884 56 899999
Q ss_pred ccccCCC---------Ccccc-----cCC------CCC----HHHHHHHHHHHhcCCCcEEEcCCC
Q 009940 347 DHCVGQG---------SAVLD-----ITA------GGN----MTDYFQSTYKFLELSPHALIPMHG 388 (522)
Q Consensus 347 D~l~~~~---------~~~~~-----~~~------~~~----~~~~~~SL~~l~~l~~~~ivPgHG 388 (522)
|+-.... ....+ ..+ ..+ ..++.+.+++..+.+..+++|+|.
T Consensus 352 D~~~~~~~ll~~~~~~~~~~D~LI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa 417 (636)
T 2ycb_A 352 DFKYEQSRLLEAAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGKILIPVFA 417 (636)
T ss_dssp SCCSSCCSSSCCCCCCCSCCSEEEEECTTCSGGGCCCCHHHHHHHHHHHHHHHHHHTCCEEEECCT
T ss_pred CCCCCcccccCCcccCCCCCeEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEECC
Confidence 9842211 00010 111 112 234555666665567889999996
No 51
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.43 E-value=2.5e-12 Score=144.04 Aligned_cols=127 Identities=13% Similarity=0.094 Sum_probs=88.5
Q ss_pred cceEEEe--cCCeEEEcCCCCCh--HHHHHHHHHHh-CCCccEEEEcCCCccccCCHHHHHHhC-----CCCEEEEcHhH
Q 009940 222 GNHRFVA--QGEALIVDPGCRSE--FHEELLKVVAS-LPRKLIVFVTHHHRDHVDGLSIIQKCN-----PDAILLAHENT 291 (522)
Q Consensus 222 ~~~~~l~--~g~~iLIDtG~~~~--~~~~L~~~~~~-~~~i~~IiiTH~H~DHiGG~~~l~~~~-----p~a~V~a~~~~ 291 (522)
+.+||++ ++..||||||.... ....+.+.+.. ..++++||+||.|.||+||+..+.+.+ ++++||+++.+
T Consensus 14 ~~n~~LIe~~~~~ILID~G~~~~~~~~~~~l~~L~~~~~~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t~~t 93 (717)
T 2i7x_A 14 TTVGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPV 93 (717)
T ss_dssp SCCCEEEEETTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHH
T ss_pred CCCEEEEEECCeEEEEeCCCCcccchhhhHHHHHHhcCCCCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEecchh
Confidence 3444444 45589999998752 11122122222 235779999999999999999998764 37899999877
Q ss_pred HHHhcc--------C----CC-----C--------CCceecCCCceEEE----CCEEEEEEeCCCCCCCCeEEEe--CCC
Q 009940 292 MRRIGK--------D----DW-----S--------LGYTSVSGSEDICV----GGQRLTVVFSPGHTDGHVALLH--AST 340 (522)
Q Consensus 292 ~~~l~~--------~----~~-----~--------~~~~~l~~g~~l~l----gg~~l~vi~tPGHT~g~i~l~~--~~~ 340 (522)
...+.. . .+ . ..+..+..++.+.+ ++.+++++ .+||++|++++.+ ++.
T Consensus 94 ~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~-~aGHs~Gs~~~~I~~~~~ 172 (717)
T 2i7x_A 94 INLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAY-NAGVCPGGSIWCISTYSE 172 (717)
T ss_dssp HHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEE-ECSSSTTCEEEEEECSSC
T ss_pred HHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEE-CCCCCCCcEEEEEEeCCC
Confidence 553210 0 01 0 02456788999999 88888876 5899999999887 456
Q ss_pred CEEEEcccc
Q 009940 341 NSLIVGDHC 349 (522)
Q Consensus 341 ~vLftGD~l 349 (522)
+++|+||+-
T Consensus 173 ~IvytGD~~ 181 (717)
T 2i7x_A 173 KLVYAKRWN 181 (717)
T ss_dssp EEEECSSCC
T ss_pred EEEEECCCC
Confidence 799999974
No 52
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.43 E-value=2.7e-13 Score=150.33 Aligned_cols=158 Identities=16% Similarity=0.109 Sum_probs=99.0
Q ss_pred CCeEEEcCCCCChH-HHHHHHH---HH-hCCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhcc-------
Q 009940 230 GEALIVDPGCRSEF-HEELLKV---VA-SLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGK------- 297 (522)
Q Consensus 230 g~~iLIDtG~~~~~-~~~L~~~---~~-~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~------- 297 (522)
+..+|||||..... ...+..+ .. ...++++||+||.|.||+||+..+.+..++++||+++.+...+..
T Consensus 206 ~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~~~~~~Iy~t~~t~~ll~~~l~d~~~ 285 (640)
T 2xr1_A 206 ESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQLDYID 285 (640)
T ss_dssp SCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCccccccccccccccccCCcccCcEEEECCCChhhhccHHHHHhcCCCCeEEECHHHHHHHHHHHHHHHH
Confidence 56899999987431 0001111 01 334567999999999999999999873447899999887654321
Q ss_pred --------CCCC--------CCceecCCCceEEE-CCEEEEEEeCCCCCCCCeEEEeC--CC--CEEEEcccccCCC---
Q 009940 298 --------DDWS--------LGYTSVSGSEDICV-GGQRLTVVFSPGHTDGHVALLHA--ST--NSLIVGDHCVGQG--- 353 (522)
Q Consensus 298 --------~~~~--------~~~~~l~~g~~l~l-gg~~l~vi~tPGHT~g~i~l~~~--~~--~vLftGD~l~~~~--- 353 (522)
..+. .....+..|+.+++ ++.++++ ..+||++|++++++. +. +++|+||+-....
T Consensus 286 ~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~-~~~GH~~Gs~~~~i~~~~~~~~ilftGD~~~~~~~ll 364 (640)
T 2xr1_A 286 VAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTF-HNAGHILGSAISHFHIGDGLHNVVFTGDYKYEKTRLF 364 (640)
T ss_dssp HHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEE-EECSSSTTCEEEEEEETTTTEEEEECCSCCSSCCSSC
T ss_pred HhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEE-EcCCCCcCcEEEEEEECCceEEEEEECCCCCCCcccc
Confidence 0111 12456888999999 9988888 468999999999884 56 7999999832211
Q ss_pred ------Cccc-----ccCC------CCC----HHHHHHHHHHHhcCCCcEEEcCCC
Q 009940 354 ------SAVL-----DITA------GGN----MTDYFQSTYKFLELSPHALIPMHG 388 (522)
Q Consensus 354 ------~~~~-----~~~~------~~~----~~~~~~SL~~l~~l~~~~ivPgHG 388 (522)
.... +..+ ..+ ..++.+++++..+.+..+++|.|.
T Consensus 365 ~~~~~~~~~~DvLi~EsT~g~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa 420 (640)
T 2xr1_A 365 DPAVNKFPRVETVISEATYGNANAFQPALKDAEKHLQMVVKNTIERGGIAVIPAFA 420 (640)
T ss_dssp CCCCCBCSCCSEEEEECTTCSTTCCCCCHHHHHHHHHHHC--------CEEEECCT
T ss_pred ccccccCCCCcEEEECCCCCCCccCCCCHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence 0000 0111 112 334555555555567789999998
No 53
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.40 E-value=2.9e-13 Score=134.00 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=80.2
Q ss_pred cceEEEecCCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHH---H-hC----CCCEEEEcHhHHH
Q 009940 222 GNHRFVAQGEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQ---K-CN----PDAILLAHENTMR 293 (522)
Q Consensus 222 ~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~---~-~~----p~a~V~a~~~~~~ 293 (522)
.++++++.++.+|||||.+.. . .+.....++++|++||.|.||++|+..+. + .+ +.++||+++.+.
T Consensus 11 ~~~~~~i~~~~iLiD~G~~~~--~---~l~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~~~- 84 (280)
T 2e7y_A 11 FSTWIYYSPERILFDAGEGVS--T---TLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNR- 84 (280)
T ss_dssp TEEEEEEGGGTEEEEECTTHH--H---HHGGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETTCH-
T ss_pred ceEEEEECCcEEEEECCcchH--H---HhccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECccHH-
Confidence 444555566789999997653 1 22334456789999999999999999884 3 22 358999998765
Q ss_pred HhccC-----------CCCCCceecCCCceEEEC-----CEEEEEEeCCCCCCC--CeEEEeC
Q 009940 294 RIGKD-----------DWSLGYTSVSGSEDICVG-----GQRLTVVFSPGHTDG--HVALLHA 338 (522)
Q Consensus 294 ~l~~~-----------~~~~~~~~l~~g~~l~lg-----g~~l~vi~tPGHT~g--~i~l~~~ 338 (522)
.+... ........+.+|+.+++| +.+++++++ +|+++ +++|.+.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~-~H~~~~~~~g~~i~ 146 (280)
T 2e7y_A 85 AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRT-KHVSSEVSFGYHIF 146 (280)
T ss_dssp HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEEC-CSCSSSCCEEEEEE
T ss_pred HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEc-cCCCCCceEEEEEE
Confidence 43210 112245678899999999 899999998 99999 9998874
No 54
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.39 E-value=4.5e-13 Score=131.85 Aligned_cols=112 Identities=17% Similarity=0.142 Sum_probs=84.1
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhCC-CCEEEEcHhHH---HHhccCCCCCCc-
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNP-DAILLAHENTM---RRIGKDDWSLGY- 304 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p-~a~V~a~~~~~---~~l~~~~~~~~~- 304 (522)
++.+|||||... +.+ .....++++|++||.|.||++|+..++...+ .++||+++.+. ..+..... ..+
T Consensus 48 ~~~iLiD~G~~~-----~~~-~~~~~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~ 120 (258)
T 3g1p_A 48 DAITLIDAGLHD-----LAD-RWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGCDDLFKHPGL-LDFS 120 (258)
T ss_dssp TEEEEECCCCTT-----HHH-HCCTTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCSTTTTTSCTT-EEEE
T ss_pred CcEEEEECCchH-----HHh-hcCcccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhhhHHHHhcCCCc-cccc
Confidence 568999999543 111 1233568899999999999999988865432 48999998776 33322211 112
Q ss_pred eecCCCceEEECCEEEEEEeCCCCCCCCeEEEeCCC--CEEEEcccc
Q 009940 305 TSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHAST--NSLIVGDHC 349 (522)
Q Consensus 305 ~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~~~--~vLftGD~l 349 (522)
..+.+|+.+++|+.++++++++ |++++++|.+..+ +++|+||+.
T Consensus 121 ~~~~~g~~~~~g~~~v~~~~~~-H~~~~~g~~i~~~~~~i~~~GDt~ 166 (258)
T 3g1p_A 121 HTVEPFVVFDLQGLQVTPLPLN-HSKLTFGYLLETAHSRVAWLSDTA 166 (258)
T ss_dssp EECCTTCCEEETTEEEEEEECC-SSSCCEEEEEECSSCEEEEECSCS
T ss_pred cccCCCCeEEECCEEEEEEECC-CCCCceEEEEEeCCcEEEEECCCC
Confidence 4688999999999999999998 9999999988643 699999985
No 55
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.39 E-value=4.4e-12 Score=127.22 Aligned_cols=153 Identities=14% Similarity=0.187 Sum_probs=106.0
Q ss_pred CeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHh----CCCCEEEEcHhHHHHhccC--------
Q 009940 231 EALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKC----NPDAILLAHENTMRRIGKD-------- 298 (522)
Q Consensus 231 ~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~----~p~a~V~a~~~~~~~l~~~-------- 298 (522)
..+|||||.+.. .++.+ ....++++||+||.|.||++|+..++.. ..+++||+++.+.+.+...
T Consensus 78 ~~iLID~G~~~~--~~l~~--~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~~~ 153 (293)
T 3md7_A 78 TVVVIDTGPDFR--MQMID--SGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETP 153 (293)
T ss_dssp EEEEECCCTTHH--HHHHH--HTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCC
T ss_pred eEEEEECCccHH--HHHHh--cCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhccc
Confidence 489999997743 23333 2456788999999999999999877642 3589999999887765431
Q ss_pred ---CCC--CCceecCCCceEEECC----EEEEEEeCCCCCCCCeEEEeCCCCEEEEccccc-CCC-------Cc--cccc
Q 009940 299 ---DWS--LGYTSVSGSEDICVGG----QRLTVVFSPGHTDGHVALLHASTNSLIVGDHCV-GQG-------SA--VLDI 359 (522)
Q Consensus 299 ---~~~--~~~~~l~~g~~l~lgg----~~l~vi~tPGHT~g~i~l~~~~~~vLftGD~l~-~~~-------~~--~~~~ 359 (522)
.++ .....+.+|+.+.+++ .+++++++++++.++++|.+. +++|+||+.. ... .. ..+.
T Consensus 154 ~~~~~~~~~~~~~l~~g~~~~~g~~~~~~~v~~~~~~H~~~~~~g~~i~--~~~y~gDt~~~~~~~~~~~~~~Dlli~e~ 231 (293)
T 3md7_A 154 VGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIG--SVVYCTDVSAFPEQSLQYIKDADVLIIGA 231 (293)
T ss_dssp TTCCCCCCEEEEECCTTCCEEECCTTCCEEEEEEEEEETTEEEEEEEET--TEEEECSCSBCCGGGHHHHTTCSEEEEEC
T ss_pred cccCCCCceEEEEcCCCCcEEECCCCCcEEEEEEEecCCCCCEEEEEEe--EEEEECCCCCCCHHHHHHhcCCCEEEEeC
Confidence 111 1345678899999999 999999998555799999986 8999999962 211 00 1111
Q ss_pred ------CCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCcC
Q 009940 360 ------TAGGNMTDYFQSTYKFLELSPHALIPMHGRVNL 392 (522)
Q Consensus 360 ------~~~~~~~~~~~SL~~l~~l~~~~ivPgHG~~~~ 392 (522)
+...+..+ +++.+.+++++.+++.|-....
T Consensus 232 ~~~~~~~~H~~~~~---a~~~~~~~~~k~lvl~H~~~~~ 267 (293)
T 3md7_A 232 LQYRPHPSHFSLGE---ALEWIEKLSPKRAILTHMHVPL 267 (293)
T ss_dssp CCSSCBTTBCCHHH---HHHHHHHHCCSEEEEESBCTTC
T ss_pred ccCCCCCCCCCHHH---HHHHHHHcCCCEEEEECCCCCC
Confidence 11123444 4444555578899999977643
No 56
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.35 E-value=2.5e-12 Score=142.99 Aligned_cols=120 Identities=20% Similarity=0.178 Sum_probs=87.2
Q ss_pred cCCeEEEcCCCCChH----HHHHHH-----HHHhC--CCccEEEEcCCCccccCCHHHHHHhC-CCCEEEEcHhHHHHhc
Q 009940 229 QGEALIVDPGCRSEF----HEELLK-----VVASL--PRKLIVFVTHHHRDHVDGLSIIQKCN-PDAILLAHENTMRRIG 296 (522)
Q Consensus 229 ~g~~iLIDtG~~~~~----~~~L~~-----~~~~~--~~i~~IiiTH~H~DHiGG~~~l~~~~-p~a~V~a~~~~~~~l~ 296 (522)
++..+|||||..... ...+.. ..... .++++||+||.|.||+||+..+.+.. .+++||+++.+...+.
T Consensus 210 ~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~~~~~~~pIy~t~~t~~ll~ 289 (651)
T 3af5_A 210 DESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMV 289 (651)
T ss_dssp SSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHHTTCCCSCEEECHHHHHHHH
T ss_pred CCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHhhcCHHHHHhcCCCCceEEEcHHHHHHHH
Confidence 356899999987542 111111 11133 56889999999999999999998742 3789999998765432
Q ss_pred c-----------C----CCC--------CCceecCCCceEEE-CCEEEEEEeCCCCCCCCeEEEeC--CC--CEEEEccc
Q 009940 297 K-----------D----DWS--------LGYTSVSGSEDICV-GGQRLTVVFSPGHTDGHVALLHA--ST--NSLIVGDH 348 (522)
Q Consensus 297 ~-----------~----~~~--------~~~~~l~~g~~l~l-gg~~l~vi~tPGHT~g~i~l~~~--~~--~vLftGD~ 348 (522)
. . .+. .....+..|+.+++ ++.++++ ..+||++|++++++. +. +++|+||+
T Consensus 290 ~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~-~~~gH~~Gs~~~~i~~~~~~~~ilftGD~ 368 (651)
T 3af5_A 290 LLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTL-HNAGHILGSAIVHLHIGNGLHNIAITGDF 368 (651)
T ss_dssp HHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEE-EECSSSTTCEEEEEEETTTTTCEEECCSC
T ss_pred HHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEE-ecCCCCcCcEEEEEEECCCceEEEEeCCC
Confidence 1 0 111 12456888999999 9988888 568999999999875 56 89999999
Q ss_pred c
Q 009940 349 C 349 (522)
Q Consensus 349 l 349 (522)
-
T Consensus 369 ~ 369 (651)
T 3af5_A 369 K 369 (651)
T ss_dssp C
T ss_pred C
Confidence 4
No 57
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.34 E-value=5.9e-12 Score=133.00 Aligned_cols=93 Identities=20% Similarity=0.228 Sum_probs=73.9
Q ss_pred CCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC---C------------CCCCceecCCCceEEECCEE
Q 009940 255 PRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD---D------------WSLGYTSVSGSEDICVGGQR 319 (522)
Q Consensus 255 ~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~---~------------~~~~~~~l~~g~~l~lgg~~ 319 (522)
.++++||+||.|.||+||+..+.+ +++||+++.+...+... . ....+..+..|+.+.+|+.+
T Consensus 83 ~~i~~v~lTH~H~DHiggl~~l~~---~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~ 159 (429)
T 2az4_A 83 YQHTAVFLSHAHLDHSRMINYLDP---AVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEIS 159 (429)
T ss_dssp CSEEEEECSCSCHHHHTTGGGBCT---TSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEETTEE
T ss_pred ccCCEEEECCchHHHhCcHhHhcC---CCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEECCEE
Confidence 356799999999999999998864 78999999887654321 0 12345678899999999999
Q ss_pred EEEEeCCCC-CCCCeEEEe--CCCCEEEEcccccC
Q 009940 320 LTVVFSPGH-TDGHVALLH--ASTNSLIVGDHCVG 351 (522)
Q Consensus 320 l~vi~tPGH-T~g~i~l~~--~~~~vLftGD~l~~ 351 (522)
+++++++ | ++|++++.+ ++.+++|+||+.+.
T Consensus 160 v~~~~~~-H~~~gs~~~~i~~~~~~i~~tGD~~~~ 193 (429)
T 2az4_A 160 VEIVPVD-HDAYGASALLIRTPDHFITYTGDLRLH 193 (429)
T ss_dssp EEEEECC-CSSTTCEEEEEEETTEEEEECCSCCSS
T ss_pred EEEEECC-CCChhhEEEEEEeCCcEEEECCCcccC
Confidence 9999885 8 899999876 45679999998753
No 58
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.32 E-value=2.8e-11 Score=117.70 Aligned_cols=144 Identities=21% Similarity=0.281 Sum_probs=99.7
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHh-CCCCEEEEcHhHHHHhccCCCCCCceecC
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKC-NPDAILLAHENTMRRIGKDDWSLGYTSVS 308 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~-~p~a~V~a~~~~~~~l~~~~~~~~~~~l~ 308 (522)
+..+|||||..... ...+.++++|++||.|.||+ |...+... .++++||+++.+...+.+ ...+.
T Consensus 46 ~~~iliDpg~~~~~-------~~~~~~id~VliTH~H~DH~-~~~~l~~~~~~~~~v~~~~~~~~~l~~------~~~l~ 111 (235)
T 3kl7_A 46 NHSIQVDPVSEYAD-------YTTFPKADIILITHEHGDHL-DPKAIQAVEKSDTEIIANENSQKKLGK------GKVLK 111 (235)
T ss_dssp TEEEEESCCTTTCC-------TTSSCCCSEEEECCSSTTTC-CHHHHHHHCCTTCEEEECHHHHHHHTC------SEECC
T ss_pred CEEEEECCCCCccc-------hhhCCCCCEEEECCCccccC-CHHHHHHhhcCCCEEEEcHHHHHHhcC------cEEec
Confidence 55899999987531 23455788999999999999 66666553 468999999999887742 46788
Q ss_pred CCc-eEEECCEEEEEEeCCCCCC--------C-CeEEEe--CCCCEEEEcccccCCCCcc---cc-------cCCCCCHH
Q 009940 309 GSE-DICVGGQRLTVVFSPGHTD--------G-HVALLH--ASTNSLIVGDHCVGQGSAV---LD-------ITAGGNMT 366 (522)
Q Consensus 309 ~g~-~l~lgg~~l~vi~tPGHT~--------g-~i~l~~--~~~~vLftGD~l~~~~~~~---~~-------~~~~~~~~ 366 (522)
+|+ .+++|+.++++++++..++ | ..+|.+ ++.+++|+||+.+...... .+ .+..-+..
T Consensus 112 ~g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g~~i~~~GDt~~~~~~~~l~~~Dv~il~~~~~~h~~~~ 191 (235)
T 3kl7_A 112 NGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGDTEDIPEMKDLKDIDIAFLPVNQPYTMTVS 191 (235)
T ss_dssp TTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEEECCSCCSCGGGGGCCSCSEEEEECCTTTSCCHH
T ss_pred CCCEEEEECCEEEEEEEeecCCCccccccCCCCceEEEEEeCCeEEEEECCCCchhhHHhhcCCCEEEECCCCCcccCHH
Confidence 999 9999999999997763222 2 255555 3457999999975542111 11 11112455
Q ss_pred HHHHHHHHHhcCCCcEEEcCCCCC
Q 009940 367 DYFQSTYKFLELSPHALIPMHGRV 390 (522)
Q Consensus 367 ~~~~SL~~l~~l~~~~ivPgHG~~ 390 (522)
+..+.+ ..++++.++|.|-..
T Consensus 192 ea~~~~---~~l~~k~vip~H~~~ 212 (235)
T 3kl7_A 192 QAAKAA---RMFSPKILYPYHYGD 212 (235)
T ss_dssp HHHHHH---HHHCCSEEEEESCTT
T ss_pred HHHHHH---HHcCCCEEEEEcCCC
Confidence 554444 445789999999876
No 59
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.30 E-value=9.9e-12 Score=124.83 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=77.4
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHh------CCCCEEEEcHhHHHHhccC-----
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKC------NPDAILLAHENTMRRIGKD----- 298 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~------~p~a~V~a~~~~~~~l~~~----- 298 (522)
++.+|||||.+.. ..+.+......++++|++||.|.||++|+..+.+. .++++||+++.+...+...
T Consensus 33 ~~~iliD~G~~~~--~~l~~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~ 110 (306)
T 2cbn_A 33 SGLWLFDCGEGTQ--HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISG 110 (306)
T ss_dssp CCEEEECCCTTHH--HHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTT
T ss_pred CcEEEEECCHHHH--HHHHHhCCCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHHHHhhc
Confidence 4589999998632 23332212334677999999999999999888652 2478999998876655321
Q ss_pred ---CCCCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeC
Q 009940 299 ---DWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA 338 (522)
Q Consensus 299 ---~~~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~ 338 (522)
.+...+..+.+|+.+++++.+++.++++ |+.++++|.+.
T Consensus 111 ~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~-H~~~~~gy~i~ 152 (306)
T 2cbn_A 111 SWTDYPLEIVEIGAGEILDDGLRKVTAYPLE-HPLECYGYRIE 152 (306)
T ss_dssp CCCSSCEEEEECCSEEEEECSSEEEEEEECB-SSSCCEEEEEE
T ss_pred cCCCceEEEEEcCCCcEeecCCEEEEEEEcc-CCCCccEEEEE
Confidence 1222346788899999999999999998 99998888763
No 60
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.28 E-value=8.3e-12 Score=129.01 Aligned_cols=138 Identities=16% Similarity=0.115 Sum_probs=89.2
Q ss_pred CCCccEEEEcCCCccccC--CHHHHHHhCC-CCEEEEcHhHHHHhccCCCC-CCceecCCCceEEECCEEEEEEeCC---
Q 009940 254 LPRKLIVFVTHHHRDHVD--GLSIIQKCNP-DAILLAHENTMRRIGKDDWS-LGYTSVSGSEDICVGGQRLTVVFSP--- 326 (522)
Q Consensus 254 ~~~i~~IiiTH~H~DHiG--G~~~l~~~~p-~a~V~a~~~~~~~l~~~~~~-~~~~~l~~g~~l~lgg~~l~vi~tP--- 326 (522)
+.++++|++||.|.||+| ++..+.+.+| +++||+++...+.+.....+ .....+..|+.+.+++.+++++.+.
T Consensus 107 l~~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~~~g~~~~~~~~l~~g~~~~~g~~~v~~~~~~H~~ 186 (360)
T 2wyl_A 107 IRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRT 186 (360)
T ss_dssp CCCCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHHHHTCCGGGEEECCTTCEEEETTEEEEEEECCCC-
T ss_pred cCCCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHHHcCCChheEEEcCCCCEEEECCEEEEEEeccCcc
Confidence 345779999999999997 4566666665 89999999887777543222 2456788999999999999988762
Q ss_pred --------CCCCC---------CeEEEe--CCCCEEEEcccccCCCCcc------cc---cCCCC------CHHHHHHHH
Q 009940 327 --------GHTDG---------HVALLH--ASTNSLIVGDHCVGQGSAV------LD---ITAGG------NMTDYFQST 372 (522)
Q Consensus 327 --------GHT~g---------~i~l~~--~~~~vLftGD~l~~~~~~~------~~---~~~~~------~~~~~~~SL 372 (522)
||++| ++++++ ++.+++|+||+.+...... ++ .+... .-....+++
T Consensus 187 ~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~~~~~~~~h~~~~ea~ 266 (360)
T 2wyl_A 187 ALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADML 266 (360)
T ss_dssp -----------------CCTTTBEEEEEEETTEEEEECTTCCCCTTHHHHHHHSCCCEEEEEBCCCCTTCCCSBCHHHHH
T ss_pred cccccccccccccccccccCcccEEEEEEECCcEEEEeCCCCcCHHHHHHhhCCCCCEEEecCCCCcccccCCCCHHHHH
Confidence 56555 466666 4457999999975432110 00 00000 011223344
Q ss_pred HHHhcCCCcEEEcCCCCCc
Q 009940 373 YKFLELSPHALIPMHGRVN 391 (522)
Q Consensus 373 ~~l~~l~~~~ivPgHG~~~ 391 (522)
+.+..++++.++|.|....
T Consensus 267 ~~~~~l~~k~vi~~H~~~~ 285 (360)
T 2wyl_A 267 RMGEALNAKVVIPFHHDIW 285 (360)
T ss_dssp HHHHHHTCSEEEEESTTTB
T ss_pred HHHHHhCCCEEEEEeeccc
Confidence 4455567899999998765
No 61
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.27 E-value=1.1e-11 Score=125.55 Aligned_cols=106 Identities=16% Similarity=0.150 Sum_probs=73.9
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHh------CCCCEEEEcHhHHHHhccC-----
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKC------NPDAILLAHENTMRRIGKD----- 298 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~------~p~a~V~a~~~~~~~l~~~----- 298 (522)
+..+|||||.+.. ..+.+......++++|++||.|.||++|+..+.+. .++++||+++.+...+...
T Consensus 31 ~~~iLiD~G~~~~--~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 108 (320)
T 1y44_A 31 RSVWLFDCGEATQ--HQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTK 108 (320)
T ss_dssp SEEEEECCCTTHH--HHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTT
T ss_pred CcEEEEECCHHHH--HHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHHHHhhc
Confidence 4589999998642 22222111223567999999999999999988753 2478999998876655321
Q ss_pred ---CCCCCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeC
Q 009940 299 ---DWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA 338 (522)
Q Consensus 299 ---~~~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~ 338 (522)
.+......+.+|+.+++++.+++.+++ +|++++++|.+.
T Consensus 109 ~~~~~~~~~~~~~~g~~~~~~~~~v~~~p~-~H~~~~~gy~i~ 150 (320)
T 1y44_A 109 THLTYPLAIQEIEEGIVFEDDQFIVTAVSV-IHGVEAFGYRVQ 150 (320)
T ss_dssp CCCSSCEEEEECCSEEEEECSSEEEEEEEC-BSSSSBEEEEEE
T ss_pred cCCCCceEEEEcCCCceEecCCEEEEEEEc-cCCCCcceEEEe
Confidence 112235568889999999866666655 699999998764
No 62
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.26 E-value=2.7e-12 Score=136.89 Aligned_cols=127 Identities=15% Similarity=0.195 Sum_probs=86.9
Q ss_pred ceEEEe--cCCeEEEcCCCCChH--HHHHHHH-HHhCCCccEEEEcCCCccccCCHHHHHHhCC-CCEEEEcHhHHHHhc
Q 009940 223 NHRFVA--QGEALIVDPGCRSEF--HEELLKV-VASLPRKLIVFVTHHHRDHVDGLSIIQKCNP-DAILLAHENTMRRIG 296 (522)
Q Consensus 223 ~~~~l~--~g~~iLIDtG~~~~~--~~~L~~~-~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p-~a~V~a~~~~~~~l~ 296 (522)
.++|++ ++..+|||||..... ...+... .....++++||+||.|.||+||+..+..... +.+||+++.+...+.
T Consensus 25 ~s~~li~~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~~~~iy~t~~t~~l~~ 104 (459)
T 2i7t_A 25 RSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYR 104 (459)
T ss_dssp SCEEEEEETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSCCSEEEEEHHHHHHHH
T ss_pred CCEEEEEECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhcCCCCCEEechHHHHHHH
Confidence 344444 356899999985321 1111000 1123356799999999999999999976542 689999987654321
Q ss_pred c---------------CCCC--------CCceecCCCceEEECCEEEEEEeCCCCCCCCeEEEeC--CCCEEEEccccc
Q 009940 297 K---------------DDWS--------LGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA--STNSLIVGDHCV 350 (522)
Q Consensus 297 ~---------------~~~~--------~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~--~~~vLftGD~l~ 350 (522)
. ..+. .....+..++.+.++|.+++++ .+||++|+++++++ +.+++|+||+..
T Consensus 105 ~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~-~~GH~~Gs~~~~i~~~~~~il~sGD~~~ 182 (459)
T 2i7t_A 105 WLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCY-HAGHVLGAAMFMIEIAGVKLLYTGDFSR 182 (459)
T ss_dssp HHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEE-ECCSSTTCEEEEEEETTEEEEECCSCCC
T ss_pred HHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEE-eCCCccCcEEEEEEECCcEEEEeCCCCC
Confidence 0 0000 1345678899999999888876 68999999999875 347999999864
No 63
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.23 E-value=2.6e-11 Score=126.17 Aligned_cols=138 Identities=15% Similarity=0.140 Sum_probs=92.3
Q ss_pred CCCccEEEEcCCCccccC--CHHHHHHhCC-CCEEEEcHhHHHHhccCCCC-CCceecCCCceEEECCEEEEEEeCC---
Q 009940 254 LPRKLIVFVTHHHRDHVD--GLSIIQKCNP-DAILLAHENTMRRIGKDDWS-LGYTSVSGSEDICVGGQRLTVVFSP--- 326 (522)
Q Consensus 254 ~~~i~~IiiTH~H~DHiG--G~~~l~~~~p-~a~V~a~~~~~~~l~~~~~~-~~~~~l~~g~~l~lgg~~l~vi~tP--- 326 (522)
+.++++|++||.|.||+| ++..+.+.+| +++||+++...+.+.....+ .....+..|+.+.+++.+++++.+.
T Consensus 131 ~~~iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~l~~g~~~~~g~~~v~~~~~~H~~ 210 (379)
T 3bv6_A 131 IKEIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWLGWGVPQERCIVAKVGDVLEIGDVKIRVLDSFDRT 210 (379)
T ss_dssp CCCCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHHHHTCCGGGEEECCTTCEEEETTEEEEEEECCCHH
T ss_pred CCCCCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHHHcCCChhhEEEeCCCCEEEECCEEEEEEeccccc
Confidence 446789999999999997 5666777665 89999999887777543222 2456788999999999999998762
Q ss_pred -------CCC--CC---------CeEEEe--CCCCEEEEcccccCCCCc------ccc---cCCCC------CHHHHHHH
Q 009940 327 -------GHT--DG---------HVALLH--ASTNSLIVGDHCVGQGSA------VLD---ITAGG------NMTDYFQS 371 (522)
Q Consensus 327 -------GHT--~g---------~i~l~~--~~~~vLftGD~l~~~~~~------~~~---~~~~~------~~~~~~~S 371 (522)
||+ +| ++++++ ++.+++|+||+.+..... .++ .+... .-....++
T Consensus 211 ~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~~~~~~~~h~~~~ea 290 (379)
T 3bv6_A 211 ALVTLPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYSNYYAKHGNDYQIDVALLSYGENPRGVTDKMTSSDV 290 (379)
T ss_dssp HHTCCCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCCTTHHHHHHHSCCSEEEEEBCCCCTTCCCSBCHHHH
T ss_pred ccccccccccccccccccccCCceEEEEEEeCCeEEEEeCCCCccHHHHHHhhcCCCCEEEecCCCCcccccccCCHHHH
Confidence 343 22 577766 445799999997543211 000 00000 01123344
Q ss_pred HHHHhcCCCcEEEcCCCCCc
Q 009940 372 TYKFLELSPHALIPMHGRVN 391 (522)
Q Consensus 372 L~~l~~l~~~~ivPgHG~~~ 391 (522)
++.+..++++.++|.|..+.
T Consensus 291 ~~~~~~l~~k~vi~~H~~~~ 310 (379)
T 3bv6_A 291 LRAAESLDCQVVVPFHHDIW 310 (379)
T ss_dssp HHHHHHHTCSEEEEESTTSB
T ss_pred HHHHHHcCCCEEEEEeeccc
Confidence 44455567999999998765
No 64
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.17 E-value=1.4e-10 Score=126.38 Aligned_cols=120 Identities=15% Similarity=0.249 Sum_probs=82.0
Q ss_pred CCeEEEcCCCCCh----------------------HHHHHHHHHHhC--CCccEEEEcCCCccccCCHHHHHHhCCCCEE
Q 009940 230 GEALIVDPGCRSE----------------------FHEELLKVVASL--PRKLIVFVTHHHRDHVDGLSIIQKCNPDAIL 285 (522)
Q Consensus 230 g~~iLIDtG~~~~----------------------~~~~L~~~~~~~--~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V 285 (522)
+..+|||||.... ....+...++.. .++++||+||.|.||+||+..+.+.+|..+|
T Consensus 27 ~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vilTH~H~DHiggl~~l~~~~~~~~i 106 (547)
T 2bib_A 27 GHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGNVDELLSTYPVDRV 106 (547)
T ss_dssp TEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHTTHHHHHHHSCBSEE
T ss_pred CeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEEcCCCccccCCHHHHHHhCCccEE
Confidence 5689999997621 123455555544 3578999999999999999999998877789
Q ss_pred EEcHhHHHHhccCC------------------CCCCce--ecCCCceEEECCEEEEEEeCC-C-C-----------CCCC
Q 009940 286 LAHENTMRRIGKDD------------------WSLGYT--SVSGSEDICVGGQRLTVVFSP-G-H-----------TDGH 332 (522)
Q Consensus 286 ~a~~~~~~~l~~~~------------------~~~~~~--~l~~g~~l~lgg~~l~vi~tP-G-H-----------T~g~ 332 (522)
++++.+...+.... ...+.. .+..++.+.+|+.++++++.+ + | ..++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~g~~~i~~l~~~~~~h~~~~~~~~~~~n~~S 186 (547)
T 2bib_A 107 YLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFGDMDIQLYNYENETDSSGELKKIWDDNSNS 186 (547)
T ss_dssp ECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEETTEEEEEESCSCCBCTTSCBCCBSSGGGGC
T ss_pred EECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEecCCeeEEEecCccccCccccccccCCCCCCc
Confidence 98865443321100 011111 346778999999999999642 2 3 3557
Q ss_pred eEEEe--CCCCEEEEcccc
Q 009940 333 VALLH--ASTNSLIVGDHC 349 (522)
Q Consensus 333 i~l~~--~~~~vLftGD~l 349 (522)
+++.+ .+.++||+||+-
T Consensus 187 ~vl~i~~~~~~iLftGD~~ 205 (547)
T 2bib_A 187 LISVVKVNGKKIYLGGDLD 205 (547)
T ss_dssp CEEEEEETTEEEEECTTCC
T ss_pred EEEEEEECCEEEEecCCcc
Confidence 77776 345799999984
No 65
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.16 E-value=1.7e-10 Score=115.21 Aligned_cols=169 Identities=15% Similarity=0.199 Sum_probs=100.1
Q ss_pred CcceEEEec--CCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHH-Hhcc
Q 009940 221 CGNHRFVAQ--GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMR-RIGK 297 (522)
Q Consensus 221 ~~~~~~l~~--g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~-~l~~ 297 (522)
..+++|++. ++.+|||||.+......+.+......++++|++||.|+||++|+..+.+.+|+++||+++.+.+ .+..
T Consensus 31 ~~g~s~li~~~~~~iLiD~G~~~~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~~~~~v~~~~~~~~~~~~~ 110 (284)
T 2p4z_A 31 EHGLSLLLKKGNKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKEILNKKYAM 110 (284)
T ss_dssp CSSCEEEEEETTEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHCTTCEEEEEGGGGSCEEEE
T ss_pred CCEEEEEEEECCeEEEEeCCCCHHHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHHcCCCceecCHHHHHHHhcc
Confidence 344445543 4589999998764334444332333457899999999999999999988888999999988764 2221
Q ss_pred CC-----C-C--C--------CceecCCCceEEECCEEEEEEeCCCCCC----------------------CCeEEEeCC
Q 009940 298 DD-----W-S--L--------GYTSVSGSEDICVGGQRLTVVFSPGHTD----------------------GHVALLHAS 339 (522)
Q Consensus 298 ~~-----~-~--~--------~~~~l~~g~~l~lgg~~l~vi~tPGHT~----------------------g~i~l~~~~ 339 (522)
.. + . . ....+.+ ..++++.-+.+-++|+|.+ +.++.++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~i~~gi~~i~~~~~~h~~~~~~g~~~~~~~~~y~~D~~~de~~~~~~~ 188 (284)
T 2p4z_A 111 RKGGQFEEIGFDLSFYEKYKNNFVLIDK--DAEIEEGFYVITNTDITYDNEFTTKNFFVEKEGKRIPDKFLDEVFVVVKE 188 (284)
T ss_dssp CSSSCEEECSCCHHHHHHHGGGEEEESS--CEEEETTEEEECSCCCCSCCHHHHTTEEEEETTEEEECCCTTCCEEEEEE
T ss_pred CccccccccccccchhhhcCceEEEeCC--CeEEeCCEEEEeeeCCccccccCCCceEEEcCCCEecCCCCCceEEEEEc
Confidence 10 0 0 0 1112222 2334221122225555532 234455544
Q ss_pred CC--EEEEcccc------c-------CCCC--cccc--cCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCc
Q 009940 340 TN--SLIVGDHC------V-------GQGS--AVLD--ITAGGNMTDYFQSTYKFLELSPHALIPMHGRVN 391 (522)
Q Consensus 340 ~~--vLftGD~l------~-------~~~~--~~~~--~~~~~~~~~~~~SL~~l~~l~~~~ivPgHG~~~ 391 (522)
.+ ++++|+.- + +... ..+. -....+...+.++++.+.+++++.++++|..+.
T Consensus 189 ~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~igg~Hl~~~~~~~~~~a~~~~~~~~~~~l~l~H~~~~ 259 (284)
T 2p4z_A 189 EDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIEEYGVKKVLTGHCTGI 259 (284)
T ss_dssp TTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEECCCCTTCCHHHHHHHHHHHHHTTBCCEEECGGGCH
T ss_pred CCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEEcccCCCCCHHHHHHHHHHHHcCCCCEEEeeCcCcH
Confidence 45 77888651 1 1000 0000 112345667888999999999999999999874
No 66
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.10 E-value=1e-09 Score=108.22 Aligned_cols=128 Identities=16% Similarity=0.135 Sum_probs=86.0
Q ss_pred CccEEEEcCCCccccCCHHHHHHhCCCCEEEEc-HhHHHHhccCCCCCCceecCCCceEEECCEEEEEEeCCCCCCC---
Q 009940 256 RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAH-ENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDG--- 331 (522)
Q Consensus 256 ~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~-~~~~~~l~~~~~~~~~~~l~~g~~l~lgg~~l~vi~tPGHT~g--- 331 (522)
++++|++||.|.||+++...++.. ++++||++ +.+...+...... ....+ ++++++++.+++.+.+. |+++
T Consensus 64 ~id~iliTH~H~DH~~~~~~~~~~-~~~~v~~~~~~~~~~l~~~g~~-~~~~~--~~~~~~~~~~i~~~pa~-H~~~~~~ 138 (264)
T 3rpc_A 64 NVTAVVVTHTHLDHWDDTAINSIP-KSLPIFVQNTADKELITSQGFI-DVRII--FESLEFNGITLRKTGGS-HGTVEMY 138 (264)
T ss_dssp TCCEEECSCCCGGGSCHHHHHHSC-TTSCEEESSHHHHHHHHHTTCS-CEEEC--SSEEEETTEEEEEECCC-SSCHHHH
T ss_pred cCCEEEECCCchhhCCCHHHHhhc-cCCeEEEeCHHHHHHHHhcCCC-eeEEe--cccEEECCEEEEEeccc-cCCcccc
Confidence 578999999999999999887764 48999999 8777777654332 22333 57899999877777553 7764
Q ss_pred -----------CeEEEeC---CCCEEEEcccccCCCC--------cc---ccc----------CCCCCHHHHHHHHHHHh
Q 009940 332 -----------HVALLHA---STNSLIVGDHCVGQGS--------AV---LDI----------TAGGNMTDYFQSTYKFL 376 (522)
Q Consensus 332 -----------~i~l~~~---~~~vLftGD~l~~~~~--------~~---~~~----------~~~~~~~~~~~SL~~l~ 376 (522)
.++|.+. +.+++|+||+.+.... +. +.. ...-+.++.. +.+.
T Consensus 139 ~~p~~~~~~~~~~g~~i~~~~~~~i~~~GDt~~~~~~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~---~~~~ 215 (264)
T 3rpc_A 139 ANPVLAPLAGDAMGVIFEAADEPTVYLVGDTVWTSDVEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIG---RMVV 215 (264)
T ss_dssp TSTTHHHHHCCCCEEEEECTTSCCEEECCSCCSCHHHHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHHHH---HHHH
T ss_pred ccccccccccccEEEEEEeCCccEEEEECCcCchHHHHHHHHHhCCCEEEEecCccccccccCCcccCHHHHH---HHHH
Confidence 2566664 4579999999654221 00 000 1112334444 4445
Q ss_pred cCCCcEEEcCCCCCc
Q 009940 377 ELSPHALIPMHGRVN 391 (522)
Q Consensus 377 ~l~~~~ivPgHG~~~ 391 (522)
.++++.++|.|-..+
T Consensus 216 ~l~~~~vi~~H~~~~ 230 (264)
T 3rpc_A 216 RKPEAKIIAVHMDTV 230 (264)
T ss_dssp HCTTSEEEEESCSSS
T ss_pred hCCcCeEEEEccccc
Confidence 567899999998764
No 67
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.10 E-value=1.1e-10 Score=121.02 Aligned_cols=107 Identities=21% Similarity=0.214 Sum_probs=83.4
Q ss_pred cCCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC-CC-CCCcee
Q 009940 229 QGEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-DW-SLGYTS 306 (522)
Q Consensus 229 ~g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~-~~-~~~~~~ 306 (522)
.|..++||+... ....++++||+||.|.||+||+.. . .+++||+++.+...+... .. ......
T Consensus 35 pG~~ilVD~f~~-----------~~~~~IdaI~lTH~H~DHiggl~~---~-~~~pIy~s~~t~~ll~~~l~~~~~~~~~ 99 (367)
T 4b87_A 35 PGTGFTVDAFQY-----------GVVEGCTAYFLTHFHSDHYAGLSK---H-FTFPVYCSEITGNLLKNKLHVQEQYIHP 99 (367)
T ss_dssp TTSSEEESCCSS-----------SSCTTCCEEECCCCCHHHHTTCST---T-CCSCEEECHHHHHHHHHHSCCCGGGEEE
T ss_pred CCCeEEEeCCCc-----------CCccCCcEEEECcChHHHhCCccc---c-cCCcEEECHHHHHHHHHHhccccceEEE
Confidence 356799998533 235678899999999999999983 2 378999999988766432 11 123567
Q ss_pred cCCCceEEECCEEEEEEeCCCCCCCCeEEEeC--CCC-EEEEcccccC
Q 009940 307 VSGSEDICVGGQRLTVVFSPGHTDGHVALLHA--STN-SLIVGDHCVG 351 (522)
Q Consensus 307 l~~g~~l~lgg~~l~vi~tPGHT~g~i~l~~~--~~~-vLftGD~l~~ 351 (522)
+..|+.+.+|+.+++++. +||++|++++++. +++ ++|+||+.+.
T Consensus 100 l~~g~~~~ig~~~v~~~~-agH~~gs~~~~i~~~~g~~il~tGD~~~~ 146 (367)
T 4b87_A 100 LPLDTECIVNGVKVVLLD-ANHCPGAVMILFYLPNGTVILHTGDFRAD 146 (367)
T ss_dssp CCBTSCEEETTEEEEEEE-CSSSTTCEEEEEECTTSCEEEECCSCCCC
T ss_pred eCCCCEEEECCEEEEEEe-CCCcCCcEEEEEEcCCCcEEEEecCcccC
Confidence 888999999999999887 7999999999884 444 9999999754
No 68
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.08 E-value=3e-10 Score=117.78 Aligned_cols=65 Identities=25% Similarity=0.244 Sum_probs=47.3
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhC----------CCCEEEEcHhHHHHhc
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCN----------PDAILLAHENTMRRIG 296 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~----------p~a~V~a~~~~~~~l~ 296 (522)
+..+|||||.+.. ..+.+......++++|++||.|.||++|+..+.... +.++||+++...+.+.
T Consensus 28 ~~~iLiD~G~g~~--~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~ 102 (368)
T 3zwf_A 28 GECWLFDCGEGTQ--TQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIW 102 (368)
T ss_dssp TEEEEECCCTTHH--HHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------CCEEEEEETTHHHHHH
T ss_pred CeEEEEeCChhHH--HHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCCCCeEEEEcHHHHHHHH
Confidence 5689999997653 233332223346779999999999999998876531 3789999988776654
No 69
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.03 E-value=4.7e-10 Score=114.10 Aligned_cols=115 Identities=8% Similarity=0.045 Sum_probs=84.6
Q ss_pred eEEEcCCCCChHHHHHHHHHH-------hCCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCC-----
Q 009940 232 ALIVDPGCRSEFHEELLKVVA-------SLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD----- 299 (522)
Q Consensus 232 ~iLIDtG~~~~~~~~L~~~~~-------~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~----- 299 (522)
.+|||+|.+.. .++.+... ...++++||+||.|.||++|+..+++. .+++||+++.+.+.+....
T Consensus 53 ~iLiD~G~~~~--~~l~~~~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~~-~~~~vy~~~~~~~~l~~~~~~f~~ 129 (321)
T 3jxp_A 53 WILCNASPDIR--AQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREG-CPHQVWCTDMVHQDLTTGFPLFNM 129 (321)
T ss_dssp EEEECCCTTHH--HHHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGGG-CCEEEEECHHHHHHTTTTSCHHHH
T ss_pred EEEEeCCchHH--HHHHhcccccccccCCcccCCEEEECCCChhhhhhHHHHHhc-CCCeEEECHHHHHHHHhhCccccc
Confidence 49999997643 23333221 345678999999999999999999765 4789999999988776421
Q ss_pred ----C-CCCceecCCCceEEE---CCEEEEEEeCC-------CCCC-----CCeEEEeC----CCCEEEEcccc
Q 009940 300 ----W-SLGYTSVSGSEDICV---GGQRLTVVFSP-------GHTD-----GHVALLHA----STNSLIVGDHC 349 (522)
Q Consensus 300 ----~-~~~~~~l~~g~~l~l---gg~~l~vi~tP-------GHT~-----g~i~l~~~----~~~vLftGD~l 349 (522)
. ......+..|+.+.+ ++.+|+.+.++ -|.+ ..++|.+. +.+++|+||+-
T Consensus 130 ~~~~~~~i~~~~i~~g~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y~~Dt~ 203 (321)
T 3jxp_A 130 LSHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLG 203 (321)
T ss_dssp HTTTTTCEEEEECCSSSCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEEESSCC
T ss_pred cccccCceeEEEcCCCCeEEeccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEEECCCC
Confidence 0 123456788999999 99999999886 3664 56777764 23699999974
No 70
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=98.91 E-value=1.8e-09 Score=110.46 Aligned_cols=107 Identities=20% Similarity=0.164 Sum_probs=79.6
Q ss_pred ecCCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccC--CCCCCce
Q 009940 228 AQGEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD--DWSLGYT 305 (522)
Q Consensus 228 ~~g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~--~~~~~~~ 305 (522)
+.|..+.||+-.. ....++++||+||.|.||+||+..+. +++||+++.+...+... .......
T Consensus 7 i~g~~i~vD~f~~-----------~~~~~i~ai~lTH~H~DHiggl~~l~----~~pVy~s~~t~~ll~~~l~~~~~~~~ 71 (336)
T 3zdk_A 7 IPHTPIAVDFWSL-----------RRAGTARLFFLSHMHSDHTVGLSSTW----ARPLYCSPITAHLLHRHLQVSKQWIQ 71 (336)
T ss_dssp CTTSSEEESCCCH-----------HHHCSSCEEECCCCCGGGSTTCSTTC----CSCEEECHHHHHHHHHHHCCCTTTEE
T ss_pred eCCCCEeecCCcc-----------cCCCCCCEEEECCChHHHHCchHHHc----CCCEEecHHHHHHHHHhhhhcccceE
Confidence 3355788997632 12346889999999999999999863 68999999988776432 1112245
Q ss_pred ecCCCceEEE-------CCEEEEEEeCCCCCCCCeEEEeC--CCCEEEEccccc
Q 009940 306 SVSGSEDICV-------GGQRLTVVFSPGHTDGHVALLHA--STNSLIVGDHCV 350 (522)
Q Consensus 306 ~l~~g~~l~l-------gg~~l~vi~tPGHT~g~i~l~~~--~~~vLftGD~l~ 350 (522)
.+..++.+.+ |+.+++++.+ ||++|++++.+. +.+++|+||+-+
T Consensus 72 ~~~~~~~~~i~~~~~~~g~~~v~~~~~-~H~~gs~~~~i~~~~~~i~~tGD~~~ 124 (336)
T 3zdk_A 72 ALEVGESHVLPLDEIGQETMTVTLLDA-NHCPGSVMFLFEGYFGTILYTGDFRY 124 (336)
T ss_dssp ECCTTSEEEEESSSSSSCEEEEEEEEC-SSSTTCEEEEEEETTEEEEECCSCCC
T ss_pred ecCCCCeEEecCcccccCCEEEEEEEC-CCCcceEEEEEEeCCceEEEeCCCCC
Confidence 5666666655 8888999987 899999999884 457999999854
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.81 E-value=2.2e-08 Score=98.90 Aligned_cols=66 Identities=20% Similarity=0.334 Sum_probs=48.2
Q ss_pred CCcceEEEecCCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHH
Q 009940 220 DCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMR 293 (522)
Q Consensus 220 g~~~~~~l~~g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~ 293 (522)
+..+++|++.. +|||||......+.+.+...++. ++|++||.|.||+||+..+ ++++||+++.+..
T Consensus 29 ~~~G~s~lie~--iLiD~G~~~~l~~~l~~~gi~~~--~~IvlTH~H~DH~ggl~~l----~~~~v~~~~~~~~ 94 (267)
T 3h3e_A 29 SEHGFSVLVDS--VLFDTGKSDVFLKNARKLGIDLP--KDVLISHGHYDHAGGLLYL----SGKRVWLRKEALD 94 (267)
T ss_dssp CCSSCEEEETT--EEECCCSSSHHHHHHHHTTCCCC--SEEECSCSCHHHHGGGGGC----CSCEEEEEGGGGS
T ss_pred eCcEeHHeeee--EEEECCCcHHHHHHHHHCCcCcC--CEEEECCCChhhhCCHHHh----cCCEEEECHHHHH
Confidence 45556666655 99999988643333333222222 7999999999999999988 6999999988754
No 72
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.69 E-value=4.5e-08 Score=93.95 Aligned_cols=127 Identities=18% Similarity=0.215 Sum_probs=73.7
Q ss_pred CCeEEEcCCCCChHHHHHHHHHHhCCCccEEEEcCCCccccCCHHHHHHhCCCCEEEEcHhHHHHhccCCCCCCceecCC
Q 009940 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSG 309 (522)
Q Consensus 230 g~~iLIDtG~~~~~~~~L~~~~~~~~~i~~IiiTH~H~DHiGG~~~l~~~~p~a~V~a~~~~~~~l~~~~~~~~~~~l~~ 309 (522)
+..+|||||.+.. . +.....++++|++||.|.||++ ...++ ++++++ ..
T Consensus 29 ~~~iLiD~g~~~~---~---~~~~~~~id~VliTH~H~DH~~-~~~l~---~~~~vi---------------------~~ 77 (220)
T 1vjn_A 29 GKTIVTDPFDESV---G---YPIPNVTADVVTESHQHFDHNA-HHLVK---GNFRVI---------------------DR 77 (220)
T ss_dssp TEEEEESCCC-----------CCCCCBCSEEECSSCC---CG-GGGCB---SSCEEE---------------------CS
T ss_pred CEEEEEcCCCCcC---C---CCcCCCCcCEEEECCCCCCCCC-chHhc---CCCEEE---------------------cC
Confidence 4589999997631 1 1112356779999999999998 66553 245554 12
Q ss_pred CceEEECCEEEEEEeCCCCCC------CC-eEEEeC--CCCEEEEcccccCCCC------ccccc-------CCCCCHHH
Q 009940 310 SEDICVGGQRLTVVFSPGHTD------GH-VALLHA--STNSLIVGDHCVGQGS------AVLDI-------TAGGNMTD 367 (522)
Q Consensus 310 g~~l~lgg~~l~vi~tPGHT~------g~-i~l~~~--~~~vLftGD~l~~~~~------~~~~~-------~~~~~~~~ 367 (522)
+..+++++.+++.+.++ |++ |+ ++|.+. +.+++|+||+...... ...+. ....+.++
T Consensus 78 ~g~~~~~~~~I~~~~~~-H~~~~g~~~g~~~g~~i~~~g~~i~~~GDt~~~~~~~~~~~~~~~Dvlil~~g~~~h~~~~~ 156 (220)
T 1vjn_A 78 PGAYTVNGVKIKGVETF-HDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLTPAQVEEIGEIDVLLVPVGGTYTIGPKE 156 (220)
T ss_dssp SEEEEETTEEEEEEEEE-EC-------CEEEEEEEEETTEEEEECTTCCSCCCHHHHHHHCCCSEEEEECCSSSSCCHHH
T ss_pred CCeEEECCEEEEEEeee-cCCCCCccCCCcEEEEEEECCeEEEEeCCCCCcchHHHHHhhCCCCEEEEcCCCcCcCCHHH
Confidence 23678899888888776 665 34 666664 4469999999654320 01110 11224554
Q ss_pred HHHHHHHHhcCCCcEEEcCCCCCc
Q 009940 368 YFQSTYKFLELSPHALIPMHGRVN 391 (522)
Q Consensus 368 ~~~SL~~l~~l~~~~ivPgHG~~~ 391 (522)
..+.++ .+.++.++|.|-...
T Consensus 157 a~~~~~---~~~~k~vi~~H~~~~ 177 (220)
T 1vjn_A 157 AKEVAD---LLNAKVIIPMHYKTK 177 (220)
T ss_dssp HHHHHH---HTTCSEEEEESCCCS
T ss_pred HHHHHH---hcCCCEEEEEecccc
Confidence 444443 346788888887664
No 73
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=97.95 E-value=1e-05 Score=72.57 Aligned_cols=101 Identities=17% Similarity=0.231 Sum_probs=69.9
Q ss_pred CCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCee
Q 009940 14 LNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGV 93 (522)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l 93 (522)
.++.|+||+|++..+ ..|.||+|.++.. |. ..+++..++.++.|+..
T Consensus 21 n~~~e~LL~~r~~~~-------------~~W~lPgG~ve~g--Et------------------~~~aa~REl~EEtGl~~ 67 (155)
T 3u53_A 21 NNAIEFLLLQASDGI-------------HHWTPPKGHVEPG--ED------------------DLETALRETQEEAGIEA 67 (155)
T ss_dssp SCSEEEEEEEESSSS-------------CCEECSEEECCSS--CC------------------HHHHHHHHHHHHHCCCG
T ss_pred CCCcEEEEEEecCCC-------------CCEECCeeeccCC--CC------------------HHHHHHHHHHHHHCCcc
Confidence 446799999997543 2599999999763 33 13789999999999987
Q ss_pred ccCcce-eecccccCCCCCCCCceeEEEEEeEcCCC-----CCCcccccccccHHHHHHHHH
Q 009940 94 RDGGEW-KLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINCLA 149 (522)
Q Consensus 94 ~~~~l~-~~~~w~~~~~~~~~~r~dT~ff~a~~p~~-----~~~e~~~~~W~~~~~al~~l~ 149 (522)
....+. .+....... .......+.||++...+. .+.|..+.+|+++.++.+.+.
T Consensus 68 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~~ 127 (155)
T 3u53_A 68 GQLTIIEGFKRELNYV--ARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQ 127 (155)
T ss_dssp GGEEEEEEEEEEEEEE--ETTEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHHC
T ss_pred ccceeeeeEeeeeecC--CCcceeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHcC
Confidence 665443 333333322 233455556666666554 446889999999999988653
No 74
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=97.84 E-value=2e-05 Score=69.22 Aligned_cols=104 Identities=15% Similarity=0.249 Sum_probs=71.0
Q ss_pred ehhhhcCCCCCceeEEeecCCCCC-CCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPK-FNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQ 84 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (522)
.+++|.+ ++ ++||+||+..+. +... +|.||++.++. +|. ..+++..+
T Consensus 9 v~~vi~~--~~-~vLL~~r~~~~~~~~~g---------~w~lPgG~ve~--gE~------------------~~~aa~RE 56 (140)
T 3gwy_A 9 VAAVIRL--GE-KYLCVQRGQTKFSYTSF---------RYEFPGGKVEE--GES------------------LQEALQRE 56 (140)
T ss_dssp EEEEEEE--TT-EEEEEEC---------C---------CEECSEEECCT--TCC------------------HHHHHHHH
T ss_pred EEEEEEe--CC-EEEEEEecCCCCCCCCC---------eEECCCccCCC--CCC------------------HHHHHHHH
Confidence 3556665 34 999999987754 1444 99999999885 333 13678899
Q ss_pred HHHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCcccccccccHHHHHH
Q 009940 85 ILEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 85 ~l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (522)
+.++.|+.+....+.....+..+ ..++...+|.+..+.+ +..|.....|+++.+..+
T Consensus 57 l~EE~Gl~~~~~~~~~~~~~~~~-----~~~~~~~~f~~~~~~~~~~~~E~~~~~W~~~~el~~ 115 (140)
T 3gwy_A 57 IMEEMDYVIEVGEKLLTVHHTYP-----DFEITMHAFLCHPVGQRYVLKEHIAAQWLSTREMAI 115 (140)
T ss_dssp HHHHHCCCEEEEEEEEEEECCCS-----SCCEEEEEEEEEECCSCCCCCSSCEEEEECHHHHTT
T ss_pred HHHhhCcEEEeceEEEEEEEEeC-----CceEEEEEEEEEecCCcccccccceeEeccHHHHhh
Confidence 99999998866554443333322 4678889999999887 557888999999988654
No 75
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=97.79 E-value=4.4e-05 Score=68.01 Aligned_cols=105 Identities=20% Similarity=0.287 Sum_probs=76.6
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.+++|.+.. + ++||+||+..++.... .|.||++.++. +|. ..+++..++
T Consensus 11 v~~vi~~~~-~-~vLL~~r~~~~~~~~g---------~w~~PgG~ve~--gE~------------------~~~aa~REl 59 (153)
T 3grn_A 11 VYALIRNEK-G-EFLLLRRSENSRTNAG---------KWDLPGGKVNP--DES------------------LKEGVAREV 59 (153)
T ss_dssp EEEEEECTT-C-CEEEEEECTTCSSSTT---------CEECSEEECCT--TCC------------------HHHHHHHHH
T ss_pred EEEEEEcCC-C-cEEEEEEcCCCCCCCC---------eEECceeecCC--CCC------------------HHHHHHhhh
Confidence 456676653 4 8999999987666666 99999999875 333 136789999
Q ss_pred HHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHHHH
Q 009940 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 86 l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al~ 146 (522)
.++.|+.+....+.....+..+ ..+....+|.+...++ ...|.....|+++.+..+
T Consensus 60 ~EE~Gl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 118 (153)
T 3grn_A 60 WEETGITMVPGDIAGQVNFELT-----EKKVIAIVFDGGYVVADVKLSYEHIEYSWVSLEKILG 118 (153)
T ss_dssp HHHHCCCCCCCSEEEEEEEECS-----SCEEEEEEEEEEECCCCCCCCTTEEEEEEECHHHHTT
T ss_pred hhhhCcEeecceEEEEEEEecC-----CceEEEEEEEEEecCCcEecCCCcceEEEEEHHHhhh
Confidence 9999999887665544444333 3567777888877776 346888999999988654
No 76
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=97.75 E-value=1.2e-05 Score=70.69 Aligned_cols=94 Identities=19% Similarity=0.251 Sum_probs=68.5
Q ss_pred eeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCc
Q 009940 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~ 97 (522)
++||+|+.. ..|.||++.++.. |+ ..+++..++.++.|+.+....
T Consensus 16 ~vLL~~r~~---------------g~W~~PgG~ve~g--Et------------------~~~aa~RE~~EEtGl~~~~~~ 60 (134)
T 3i7u_A 16 EVLLIKTPS---------------NVWSFPKGNIEPG--EK------------------PEETAVREVWEETGVKGEILD 60 (134)
T ss_dssp EEEEEECTT---------------SCEECCEEECCTT--CC------------------HHHHHHHHHHHHHSEEEEEEE
T ss_pred EEEEEEeCC---------------CcEECCeeEecCC--CC------------------HHHHHHHHHHHhcCceEEEee
Confidence 999999741 3799999999863 33 137899999999999876543
Q ss_pred -ceeecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHHHHHH
Q 009940 98 -EWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINCL 148 (522)
Q Consensus 98 -l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al~~l 148 (522)
+..+.++.+.. +......+.||++...++ .+.|..+..|+++.++.+.+
T Consensus 61 ~l~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~e~~~~l 113 (134)
T 3i7u_A 61 YIGEIHYWYTLK--GERIFKTVKYYLMKYKEGEPRPSWEVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp EEEEEEEEEEET--TEEEEEEEEEEEEEEEEECCCCCTTSSEEEEEEHHHHHHHB
T ss_pred eeeeeeEEecCC--CceEEEEEEEEEEEEcCCcCcCChhheEEEEEEHHHHhhhc
Confidence 33344455544 433334567889888777 45688999999999998764
No 77
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=97.68 E-value=0.00011 Score=66.57 Aligned_cols=113 Identities=12% Similarity=0.083 Sum_probs=79.3
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCC-CCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWD-LPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
+++|.+.. + ++||.||++.+..... .|. ||++.++.. |. ..+++..++
T Consensus 38 ~v~i~~~~-~-~vLl~~r~~~~~~~~g---------~w~~~PgG~ve~g--Es------------------~~~aa~REl 86 (171)
T 1q27_A 38 NAFLRNSQ-G-QLWIPRRSPSKSLFPN---------ALDVSVGGAVQSG--ET------------------YEEAFRREA 86 (171)
T ss_dssp EEEEEETT-T-EEEECCSCCSSSCCCC---------SCCCSEEEECSSS--SC------------------HHHHHHHHH
T ss_pred EEEEECCC-C-eEEEEEecCCCCCCCC---------ccccccCccccCC--CC------------------HHHHHHHHH
Confidence 44555543 4 8999998776655555 999 999999863 33 126789999
Q ss_pred HHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC----CCCcccccccccHHHHHHHHHhcCCC
Q 009940 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSCINCLAEVKPS 154 (522)
Q Consensus 86 l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~----~~~e~~~~~W~~~~~al~~l~~~~~~ 154 (522)
.++.|+.+....+.++..+. |.. ..... ...+|.+.. ++ +..|.....|+++.+..+++......
T Consensus 87 ~EEtGl~~~~~~l~~~~~~~-~~~-~~~~~-~~~~f~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~ 155 (171)
T 1q27_A 87 REELNVEIDALSWRPLASFS-PFQ-TTLSS-FMCVYELRS-DATPIFNPNDISGGEWLTPEHLLARIAAGEAA 155 (171)
T ss_dssp HHHHSCTTSSSCEEEEEEEC-SSS-SCCSS-EEEEEEEEC-CCCCCSCTTTCSCCEEECHHHHHHHHHHHSSC
T ss_pred HHHHCCcccccceEEEEEEe-ccC-CCCcc-EEEEEEEEE-CCccccCchhhheEEEecHHHHHHHHhcCCCC
Confidence 99999998887666666655 111 12223 556677776 44 46788899999999999877766543
No 78
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=97.66 E-value=3.2e-05 Score=67.36 Aligned_cols=108 Identities=17% Similarity=0.243 Sum_probs=71.6
Q ss_pred ehhhhcCC-CCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHH
Q 009940 6 VALILKNP-LNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQ 84 (522)
Q Consensus 6 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (522)
.+++|-+. .++.++||+||++ +. ..|.||++.++. +|. ..+++..+
T Consensus 6 ~~~vi~~~~~~~~~vLl~~r~~----~~---------~~w~~PgG~ve~--gE~------------------~~~aa~RE 52 (138)
T 1ktg_A 6 AGLVIYRKLAGKIEFLLLQASY----PP---------HHWTPPKGHVDP--GED------------------EWQAAIRE 52 (138)
T ss_dssp EEEEEEEEETTEEEEEEEEESS----TT---------CCEESSEEECCT--TCC------------------HHHHHHHH
T ss_pred EEEEEEEecCCCcEEEEEEccC----CC---------CcEeCCccccCC--CCC------------------HHHHHHHH
Confidence 34444433 3345899999872 12 389999999986 444 13679999
Q ss_pred HHHHcCCeeccCcce-eecccccCCCCCCCCceeEEEEEeEcCCC----CCCcccccccccHHHHHHHH
Q 009940 85 ILEQLGFGVRDGGEW-KLWKCVEEPEFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSCINCL 148 (522)
Q Consensus 85 ~l~~~gl~l~~~~l~-~~~~w~~~~~~~~~~r~dT~ff~a~~p~~----~~~e~~~~~W~~~~~al~~l 148 (522)
+.++.|+.+..-.+. .+...++-. .+..++...||++.++.+ +..|..+..|+++.+..+.+
T Consensus 53 ~~EEtGl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 119 (138)
T 1ktg_A 53 TKEEANITKEQLTIHEDCHETLFYE--AKGKPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIA 119 (138)
T ss_dssp HHHHHCCCGGGEEEEEEEEEEEEEE--ETTEEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHH
T ss_pred HHHHHCCCccceEEeccccceEEEE--eCCCceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhh
Confidence 999999965443332 222222211 113567788999998773 56788899999999988753
No 79
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=97.62 E-value=0.00013 Score=65.12 Aligned_cols=109 Identities=19% Similarity=0.237 Sum_probs=74.9
Q ss_pred hhhhcCCCCCceeEEeecCCCCC--CCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPK--FNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQ 84 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (522)
+++|.+.. + ++||+||+..|. .... .|.||++.++. +|. ..+++..|
T Consensus 17 ~~vi~~~~-~-~vLl~~r~~~~~~~~~~~---------~w~~PgG~ve~--gE~------------------~~~aa~RE 65 (159)
T 1sjy_A 17 GVVLLNER-G-DILLVQEKGIPGHPEKAG---------LWHIPSGAVED--GEN------------------PQDAAVRE 65 (159)
T ss_dssp EEEEBCTT-C-CEEEEEESCC----CCCC---------CEECSEEECCT--TSC------------------HHHHHHHH
T ss_pred EEEEEeCC-C-CEEEEEecccCcCCCCCC---------eEECCccccCC--CCC------------------HHHHHHHH
Confidence 45566543 4 899999987642 2333 89999999985 333 13678999
Q ss_pred HHHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC------CCCcccccccccHHHHHHHHHh
Q 009940 85 ILEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG------NQILQEGCKWMSTQSCINCLAE 150 (522)
Q Consensus 85 ~l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~------~~~e~~~~~W~~~~~al~~l~~ 150 (522)
+.++.|+.+....+.....+..+. + ..+.+.+|++..+.+ +..|..+..|+++.++.+.+..
T Consensus 66 ~~EEtGl~~~~~~~l~~~~~~~~~--~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 133 (159)
T 1sjy_A 66 ACEETGLRVRPVKFLGAYLGRFPD--G--VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAA 133 (159)
T ss_dssp HHHHHSCCEEEEEEEEEEEEECTT--S--CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHT
T ss_pred HHHHHCccceeeEEEEEEecccCC--C--ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhc
Confidence 999999987654433222222222 2 578888999988765 3567889999999998887653
No 80
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=97.61 E-value=7.1e-05 Score=68.04 Aligned_cols=105 Identities=22% Similarity=0.311 Sum_probs=67.4
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
++++.+ ++ ++||+||.+++ .+.. .|.||++.++. +|+ ..+++..|+.
T Consensus 38 ~vii~~--~~-~vLL~~~~r~~-~~~~---------~w~lPgG~ve~--gEs------------------~~~aa~REl~ 84 (170)
T 1v8y_A 38 AVIALR--EG-RMLFVRQMRPA-VGLA---------PLEIPAGLIEP--GED------------------PLEAARRELA 84 (170)
T ss_dssp EEEEEE--TT-EEEEEECCBTT-TTBC---------CBBCSEEECCT--TCC------------------HHHHHHHHHH
T ss_pred EEEEEE--CC-EEEEEEEEeCC-CCCC---------EEECCccccCC--CCC------------------HHHHHHHHHH
Confidence 344555 45 99999998776 3334 89999999985 333 1367999999
Q ss_pred HHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC-----CCCcccccccccHHHHHHHHHh
Q 009940 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINCLAE 150 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~-----~~~e~~~~~W~~~~~al~~l~~ 150 (522)
++.|+ . +.+..+..+...+ +.. ...+.+|++...++ +..|..+..|+++.++.+.+..
T Consensus 85 EEtGl-~--~~~~~l~~~~~~~--~~~-~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 147 (170)
T 1v8y_A 85 EQTGL-S--GDLTYLFSYFVSP--GFT-DEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQR 147 (170)
T ss_dssp HHHSE-E--EEEEEEEEEESCT--TTB-CCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHT
T ss_pred HHHCC-C--cCceeeEEEecCC--Ccc-ccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHC
Confidence 99999 3 3344444443333 222 33455666665442 5678899999999999987764
No 81
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=97.59 E-value=1.2e-05 Score=76.88 Aligned_cols=124 Identities=15% Similarity=0.118 Sum_probs=80.3
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCc---------------cccc----cccc--cccCCCCccccccccCCCCCCcee
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFND---------------EEYD----SYVD--SDLWDLPAIKLNHIQGEKSEPTIS 64 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~----~~~~--~~~~~~p~~~l~~~~~~~~~~~~~ 64 (522)
+++++-++.++ ++||+||.+||-... +.++ .|-+ .-.|.||++.++. .||+
T Consensus 39 V~vl~~~~~~~-~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~-~gEs------ 110 (218)
T 3q91_A 39 VTVLLFNSSRR-SLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQ-PGLS------ 110 (218)
T ss_dssp EEEEEEEGGGT-EEEEEEEECHHHHHHHTC-------------------------CCEEEECEEEECCS-SSCC------
T ss_pred EEEEEEECCCC-EEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcceeCC-CCCC------
Confidence 45666666645 999999988874310 0000 0001 2489999999886 1333
Q ss_pred eeccccccccccchhchHHHHHHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCC------C----CCCccc
Q 009940 65 IQGSEKINLGKFDIESALNQILEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLD------G----NQILQE 134 (522)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~------~----~~~e~~ 134 (522)
-.+++..|+.++.|+....+.+.+...+.+.+ +.. .....+|+|.... + +.+|..
T Consensus 111 ------------~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~--g~~-~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ 175 (218)
T 3q91_A 111 ------------LEEVACKEAWEECGYHLAPSDLRRVATYWSGV--GLT-GSRQTMFYTEVTDAQRSGPGGGLVEEGELI 175 (218)
T ss_dssp ------------HHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC-----C-CEEEEEEEEEECGGGBCC---------CCE
T ss_pred ------------HHHHHHHHHHHHhCCccccCceEEEEEEecCC--Ccc-ceEEEEEEEEECCcccccCCCCCCCCCcEE
Confidence 13679999999999998667777777766655 323 4456777777531 1 678999
Q ss_pred ccccccHHHHHHHHHhcC
Q 009940 135 GCKWMSTQSCINCLAEVK 152 (522)
Q Consensus 135 ~~~W~~~~~al~~l~~~~ 152 (522)
+..|++..++.+++.+-.
T Consensus 176 ev~wv~l~el~~~i~~g~ 193 (218)
T 3q91_A 176 EVVHLPLEGAQAFADDPD 193 (218)
T ss_dssp EEEEEEGGGHHHHHHCTT
T ss_pred EEEEEEHHHHHHHHHcCC
Confidence 999999999999887544
No 82
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=97.49 E-value=4.6e-05 Score=68.43 Aligned_cols=103 Identities=17% Similarity=0.297 Sum_probs=71.8
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.+++|.+ ++ ++||+||+..| ... .|.||++.++.. |. ..+++..++
T Consensus 32 v~~vi~~--~~-~vLL~~r~~~~--~~~---------~w~lPgG~ve~g--Es------------------~~~aa~REl 77 (157)
T 4dyw_A 32 CGAAIVR--DG-RILLIKRKRAP--EAG---------CWGLPGGKVDWL--EP------------------VERAVCREI 77 (157)
T ss_dssp EEEEEEE--TT-EEEEEEECSSS--STT---------CEECCEEECCTT--CC------------------HHHHHHHHH
T ss_pred EEEEEEE--CC-EEEEEEecCCC--CCC---------EEECCcccCCCC--CC------------------HHHHHHHHH
Confidence 3455555 34 99999998754 333 999999998753 33 136789999
Q ss_pred HHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC-----CCCcccccccccHHHHH
Q 009940 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCI 145 (522)
Q Consensus 86 l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~-----~~~e~~~~~W~~~~~al 145 (522)
.++.|+.+....+.....+..+. ...++.+.+|.+..+++ +..|.....|+++.+..
T Consensus 78 ~EEtGl~~~~~~~~~~~~~~~~~---~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~ 139 (157)
T 4dyw_A 78 EEELGIALERATLLCVVDHIDAA---NGEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLP 139 (157)
T ss_dssp HHHHSCEEESCEEEEEEEEEETT---TTEEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCC
T ss_pred HHHHCcccccCcEEEEEEeeccC---CCcEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHcc
Confidence 99999998776554444443322 24566777888877666 44678899999887643
No 83
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=97.49 E-value=0.00016 Score=64.52 Aligned_cols=108 Identities=15% Similarity=0.208 Sum_probs=71.3
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.+++|.+. +.++||+||+..+ ... .|.||++.++.. |. ..+++..++
T Consensus 21 v~~vi~~~--~~~vLl~~r~~~~--~~g---------~w~~PgG~ve~g--E~------------------~~~aa~REl 67 (160)
T 1rya_A 21 LDFIVENS--RGEFLLGKRTNRP--AQG---------YWFVPGGRVQKD--ET------------------LEAAFERLT 67 (160)
T ss_dssp EEEEEECT--TSCEEEEEECSSS--STT---------SEECCEEECCTT--CC------------------HHHHHHHHH
T ss_pred EEEEEEcC--CCEEEEEeccCCC--CCC---------EEECCccccCCC--CC------------------HHHHHHHHH
Confidence 34556553 3389999998643 233 899999999853 33 126789999
Q ss_pred HHHcCCeeccCc---ceeecccccCCCCC--CCCceeEEEEEeEcCCC----CCCcccccccccHHHHHH
Q 009940 86 LEQLGFGVRDGG---EWKLWKCVEEPEFG--PGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 86 l~~~gl~l~~~~---l~~~~~w~~~~~~~--~~~r~dT~ff~a~~p~~----~~~e~~~~~W~~~~~al~ 146 (522)
.++.|+.+.... +..+.+..+....+ +...+-+.+|.+..+.+ +..|.....|+++.+..+
T Consensus 68 ~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 137 (160)
T 1rya_A 68 MAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLA 137 (160)
T ss_dssp HHHHSSCCCGGGSEEEEEEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHH
T ss_pred HHHHCCCCCcccceEEEEEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhh
Confidence 999999864332 23333333322001 12256777888888766 456889999999988765
No 84
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=97.47 E-value=0.00013 Score=64.82 Aligned_cols=99 Identities=19% Similarity=0.341 Sum_probs=72.7
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
++++.+ ++ ++||+||.++ +. ..|.||++.++. +|+ ..+++..|+.
T Consensus 9 ~~ii~~--~~-~vLl~~r~~~---~~---------~~w~~PgG~ve~--gEs------------------~~~aa~REl~ 53 (153)
T 3shd_A 9 ACVVHA--EG-KFLVVEETIN---GK---------ALWNQPAGHLEA--DET------------------LVEAAARELW 53 (153)
T ss_dssp EEEEEE--TT-EEEEEEEEET---TE---------EEEECSEEECCT--TCC------------------HHHHHHHHHH
T ss_pred EEEEEe--CC-EEEEEEecCC---CC---------CCEECCeEEeCC--CCC------------------HHHHHHHHHH
Confidence 344543 34 9999999721 22 389999999976 334 1367899999
Q ss_pred HHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC-----CCCcccccccccHHHH
Q 009940 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSC 144 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~-----~~~e~~~~~W~~~~~a 144 (522)
++.|+.+....+.....+..+. ...+-+.+|++....+ +..|.....|+++.+.
T Consensus 54 EEtGl~~~~~~~~~~~~~~~~~----~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 54 EETGISAQPQHFIRMHQWIAPD----KTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp HHHCCCCCCCEEEEEEEECCTT----SCCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHH
T ss_pred HHHCcccccCcEEEEEEEecCC----CceEEEEEEEEEccccCcCCCCcccceeeEEecHHHh
Confidence 9999998877666655566553 3456667888888775 5678899999999988
No 85
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=97.45 E-value=0.00015 Score=65.25 Aligned_cols=104 Identities=11% Similarity=0.178 Sum_probs=74.3
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
+++|.+..++ ++||+||+..+ +...|.||++.++. +|+ ..+++..++.
T Consensus 14 ~~vi~~~~~~-~vLL~~r~~~~-----------~~g~w~lPgG~ve~--gEs------------------~~~aa~REl~ 61 (161)
T 3exq_A 14 MVMVTDPETQ-RVLVEDKVNVP-----------WKAGHSFPGGHVEV--GEP------------------CATAAIREVF 61 (161)
T ss_dssp EEEEBCTTTC-CEEEECCCCCT-----------TTCSBBCCCCBCCT--TSC------------------HHHHHHHHHH
T ss_pred EEEEEeCCCC-EEEEEEccCCC-----------CCCCEEccceecCC--CCC------------------HHHHHHHHHH
Confidence 4566665534 99999987322 23479999999886 333 2367899999
Q ss_pred HHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCcccccccccHHHHH
Q 009940 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCI 145 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~~~~al 145 (522)
++.|+.+....+.....+..+. ...++...+|.+....+ ..+|..+..|+++.++.
T Consensus 62 EEtGl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~ 119 (161)
T 3exq_A 62 EETGLRLSGVTFCGTCEWFDDD---RQHRKLGLLYRASNFTGTLKASAEGQLSWLPITALT 119 (161)
T ss_dssp HHHCCEESCCEEEEEEEEECSS---CSSEEEEEEEEECCEESCCCGGGTTTEEEECGGGCC
T ss_pred HhhCcEecCCcEEEEEecccCC---CCeEEEEEEEEEeccCCccCCCccceEEEeeHHHhh
Confidence 9999998877666665555532 34577788888877766 45677889999987653
No 86
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=97.38 E-value=0.00027 Score=60.31 Aligned_cols=99 Identities=18% Similarity=0.155 Sum_probs=68.0
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
+++|.+.. + ++||+||+. ..|.||++.++. +|+ ..+++..++.
T Consensus 6 ~~vi~~~~-~-~vLl~~r~~---------------g~w~~PgG~ve~--gE~------------------~~~aa~RE~~ 48 (126)
T 1vcd_A 6 GGVVFNAK-R-EVLLLRDRM---------------GFWVFPKGHPEP--GES------------------LEEAAVREVW 48 (126)
T ss_dssp EEEEECTT-S-CEEEEECTT---------------SCEECCEECCCT--TCC------------------HHHHHHHHHH
T ss_pred EEEEEcCC-C-EEEEEEECC---------------CCccCCcCcCCC--CCC------------------HHHHHHHHHH
Confidence 44555443 4 899999864 279999999985 333 1267889999
Q ss_pred HHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHHHHH
Q 009940 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINC 147 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al~~ 147 (522)
++.|+.+....+....++..+ .......+|.+....+ ++.|.....|+++.+..+.
T Consensus 49 EE~Gl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~e~~~~~w~~~~el~~~ 107 (126)
T 1vcd_A 49 EETGVRAEVLLPLYPTRYVNP-----KGVEREVHWFLMRGEGAPRLEEGMTGAGWFSPEEARAL 107 (126)
T ss_dssp HHHCCEEEEEEEEEEEEEECT-----TSCEEEEEEEEEEEESCCCCCTTCCEEEEECHHHHHHH
T ss_pred HhhCcEeeeccEEeEEEEecC-----CceEEEEEEEEEEcCCCCCCCcceeeeEEcCHHHHHHh
Confidence 999999876544333333332 2345667777766554 4568889999999998774
No 87
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=97.37 E-value=7.7e-05 Score=66.57 Aligned_cols=101 Identities=18% Similarity=0.218 Sum_probs=63.0
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
+++|.+.. + ++||.||+ . ..|.||++.++.. |. ..+++..++.
T Consensus 25 ~~ii~~~~-~-~vLL~~r~------~---------~~w~lPgG~ve~g--Es------------------~~~aa~REl~ 67 (153)
T 3eds_A 25 AAVIKNEQ-G-EILFQYPG------G---------EYWSLPAGAIELG--ET------------------PEEAVVREVW 67 (153)
T ss_dssp EEEEBCTT-C-CEEEECC------------------CBBCSEEECCTT--SC------------------HHHHHHHHHH
T ss_pred EEEEEcCC-C-eEEEEEcC------C---------CcEECCccccCCC--CC------------------HHHHHHHHHH
Confidence 45555543 3 89998886 2 3899999998853 33 1367899999
Q ss_pred HHcCCeeccCcceeec-----ccccCCCCCCCCceeEEEEEeEcCCC----CCCcccccccccHHHHHH
Q 009940 87 EQLGFGVRDGGEWKLW-----KCVEEPEFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~-----~w~~~~~~~~~~r~dT~ff~a~~p~~----~~~e~~~~~W~~~~~al~ 146 (522)
++.|+.+....+.... ++.-+. +....+.+.+|.+....+ +..|..+..|+++.+..+
T Consensus 68 EEtGl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 134 (153)
T 3eds_A 68 EETGLKVQVKKQKGVFGGKEYRYTYSN--GDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPP 134 (153)
T ss_dssp HHHCEEEEEEEEEEEECSGGGEEECTT--SCEEEEEEEEEEEEEEEECCC-------CEEEECGGGCCC
T ss_pred HHHCccceeeeEEEEecccceeeecCC--CCeEEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCch
Confidence 9999998765544321 333333 323345677888888766 467888999999876544
No 88
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=97.34 E-value=0.00012 Score=62.55 Aligned_cols=93 Identities=13% Similarity=0.173 Sum_probs=62.7
Q ss_pred eeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCc
Q 009940 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~ 97 (522)
++||+||+.. +.... +|.||++.++.. |. ..+++..++.++.|+.+....
T Consensus 17 ~vLl~~r~~~-~~~~g---------~w~~PgG~~e~g--E~------------------~~~aa~RE~~EE~G~~~~~~~ 66 (129)
T 1mut_A 17 EIFITRRAAD-AHMAN---------KLEFPGGKIEMG--ET------------------PEQAVVRELQEEVGITPQHFS 66 (129)
T ss_dssp EEEEEECSSC-CSSSC---------CEECCCCCSSSC--SS------------------TTHHHHHHHHTTTCCSSCEEC
T ss_pred EEEEEEeCCC-CCCCC---------eEECCccCcCCC--CC------------------HHHHHHHHHHHHhCCccccce
Confidence 8999998765 34444 999999998753 33 126788999999999876433
Q ss_pred ceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCcccccccccHHHHH
Q 009940 98 EWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCI 145 (522)
Q Consensus 98 l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~~~~al 145 (522)
......+ . ...++....||.+...++ ...|..+..|+++.+..
T Consensus 67 ~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~ 111 (129)
T 1mut_A 67 LFEKLEY---E--FPDRHITLWFWLVERWEGEPWGKEGQPGEWMSLVGLN 111 (129)
T ss_dssp CCCCCBC---C--CSSCEEECCCEEEEECSSCCCCCSSCCCEEEESSSCC
T ss_pred EEEEEEE---e--cCCceEEEEEEEEEccCCccCCcccceeEEeCHHHcc
Confidence 2211111 1 223566677888888766 45677788999876543
No 89
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=97.33 E-value=0.00011 Score=63.53 Aligned_cols=102 Identities=19% Similarity=0.264 Sum_probs=70.8
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.+++|.+ ++ ++||+||+. ..|.||++.++. +|+ ..+++..++
T Consensus 7 ~~~vi~~--~~-~vLl~~r~~---------------~~w~~PgG~ve~--gE~------------------~~~aa~RE~ 48 (134)
T 2pbt_A 7 AGGVLFK--DG-EVLLIKTPS---------------NVWSFPKGNIEP--GEK------------------PEETAVREV 48 (134)
T ss_dssp EEEEEEE--TT-EEEEEECTT---------------SCEECCEEECCT--TCC------------------HHHHHHHHH
T ss_pred EEEEEEE--CC-EEEEEEeCC---------------CcEECCccccCC--CCC------------------HHHHHHHHH
Confidence 3455554 34 999999965 389999999875 333 136788999
Q ss_pred HHHcCCeeccCccee-ecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHHHHH
Q 009940 86 LEQLGFGVRDGGEWK-LWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINC 147 (522)
Q Consensus 86 l~~~gl~l~~~~l~~-~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al~~ 147 (522)
.++.|+.+....... +.+..+.+ +........+|++..+.+ ...|..+..|+++.++.+.
T Consensus 49 ~EE~Gl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 112 (134)
T 2pbt_A 49 WEETGVKGEILDYIGEIHYWYTLK--GERIFKTVKYYLMKYKEGEPRPSWEVKDAKFFPIKEAKKL 112 (134)
T ss_dssp HHHHSEEEEEEEEEEEEEEEEEET--TEEEEEEEEEEEEEEEEECCCCCTTSSEEEEEEHHHHHHH
T ss_pred HHHHCCccEEeeeeeEEEEEeeCC--CcEEEEEEEEEEEEecCCCcCCCcceeEEEEEcHHHHHhh
Confidence 999999987654333 33333433 333455677888888766 2338889999999998875
No 90
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=97.33 E-value=0.00017 Score=63.88 Aligned_cols=97 Identities=18% Similarity=0.172 Sum_probs=70.7
Q ss_pred ceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccC
Q 009940 17 SEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDG 96 (522)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~ 96 (522)
.++||+||+.++. .. .|.||++.++.. |. ..+++..++.++.|+.+...
T Consensus 19 ~~vLl~~r~~~~~--~~---------~w~lPgG~ve~g--E~------------------~~~aa~RE~~EEtGl~~~~~ 67 (153)
T 2b0v_A 19 DKYLLVEEIPRGT--AI---------KLNQPAGHLEPG--ES------------------IIQACSREVLEETGHSFLPE 67 (153)
T ss_dssp TEEEEEEECSSSS--CC---------EEECSEEECCTT--SC------------------HHHHHHHHHHHHHSEEEEEE
T ss_pred CEEEEEEEcCCCC--CC---------eEECCCcCcCCC--CC------------------HHHHHHHHHHHhhCcEeccc
Confidence 3999999987653 44 899999999853 33 12679999999999998866
Q ss_pred cceeecccccCCCCCCCCceeEEEEEeEcCCC-----CCCcccccccccHHHHHHH
Q 009940 97 GEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINC 147 (522)
Q Consensus 97 ~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~-----~~~e~~~~~W~~~~~al~~ 147 (522)
.+.....|..+. ....+-..+|.+....+ ...|..+..|+++.++.+.
T Consensus 68 ~~~~~~~~~~~~---~~~~~~~~~f~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 68 VLTGIYHWTCAS---NGTTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp EEEEEEEEEETT---TTEEEEEEEEEEEEEEECTTSCCCTTEEEEEEEEHHHHHHT
T ss_pred eEEEEEEEeCCC---CCcEEEEEEEEEEeCCCCCCCCCCCCeeeEEEecHHHHhhh
Confidence 555444455443 23455666788877654 3578889999999998874
No 91
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=97.32 E-value=0.00019 Score=66.86 Aligned_cols=114 Identities=15% Similarity=0.202 Sum_probs=75.1
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.++++-++.++ ++||+||.++|.+..+. -+...|.||++.++ ||+ ..+++..|+
T Consensus 48 v~v~~~~~~~~-~vlLv~~~r~~~~~~~~----~~~~~w~lPgG~ve---gE~------------------~~~aa~REl 101 (191)
T 3o6z_A 48 ATILLYNTKKK-TVVLIRQFRVATWVNGN----ESGQLIESCAGLLD---NDE------------------PEVCIRKEA 101 (191)
T ss_dssp EEEEEEETTTT-EEEEEEEECHHHHTTTC----TTCEEEECEEEECC---SSC------------------HHHHHHHHH
T ss_pred EEEEEEECCCC-EEEEEEcCCccccccCC----CCCeEEEecceEeC---CCC------------------HHHHHHHHH
Confidence 34555565545 99999998877532211 01238999999998 555 136799999
Q ss_pred HHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC--------CCCcccccccccHHHHHHHHHh
Q 009940 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--------NQILQEGCKWMSTQSCINCLAE 150 (522)
Q Consensus 86 l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--------~~~e~~~~~W~~~~~al~~l~~ 150 (522)
.++.|+... .+..+....+.+ + .......+|++..... ...|..+..|+++.++.+++..
T Consensus 102 ~EEtG~~~~--~~~~l~~~~~~~--~-~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~ 169 (191)
T 3o6z_A 102 IEETGYEVG--EVRKLFELYMSP--G-GVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKT 169 (191)
T ss_dssp HHHC-CCCS--CEEEEEEEESCT--T-TBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHH
T ss_pred HHHhCCccC--cEEEEEEEEeCC--C-ccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHc
Confidence 999999863 344444433333 2 2344567788876432 3678999999999999998765
No 92
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=97.30 E-value=0.00035 Score=61.68 Aligned_cols=94 Identities=17% Similarity=0.180 Sum_probs=67.5
Q ss_pred CceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeecc
Q 009940 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (522)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~ 95 (522)
+.++||+||+.+ ..|.||++.++. +|+ ..+++..++.++.|+.+..
T Consensus 19 ~~~vLl~~r~~~--------------g~w~~PgG~ve~--gE~------------------~~~aa~REl~EEtGl~~~~ 64 (149)
T 3son_A 19 NYQFGVLHRTDA--------------DVWQFVAGGGED--EEA------------------ISETAKRESIEELNLDVDV 64 (149)
T ss_dssp SEEEEEEEESSS--------------SCEECEEEECCT--TCC------------------HHHHHHHHHHHHHTCCSCC
T ss_pred CeEEEEEEEcCC--------------CCEeCCccccCC--CCC------------------HHHHHHHHHHHHhCCCccc
Confidence 459999999874 389999999987 444 1378999999999999877
Q ss_pred C--cceee-----cccccCCCCCCCCceeEEEEEeEcCC--C---CCCcccccccccHHHHHHH
Q 009940 96 G--GEWKL-----WKCVEEPEFGPGLTIHTVYIMGKLLD--G---NQILQEGCKWMSTQSCINC 147 (522)
Q Consensus 96 ~--~l~~~-----~~w~~~~~~~~~~r~dT~ff~a~~p~--~---~~~e~~~~~W~~~~~al~~ 147 (522)
. .+..+ .+|.-+. .......+|.+.++. + ...|..+..|+++.++.+.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 124 (149)
T 3son_A 65 KMYSLDSHASIPNFHFSFNK----PYVVPEYCFAIDLTSCSYQVTLSLEHSELRWVSYESAIQL 124 (149)
T ss_dssp CEEEEEEEEEEEGGGTCSSS----CSEEEEEEEEEECTTTGGGCCCCTTEEEEEEECHHHHHHH
T ss_pred ceEEEEeeecccceeeccCC----ceEeEEEEEEEEcCCCCCcccCCCceeeEEEeCHHHHHHH
Confidence 4 11111 1222121 345667789999984 3 2478899999999998875
No 93
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=97.27 E-value=0.00022 Score=66.24 Aligned_cols=100 Identities=11% Similarity=0.047 Sum_probs=66.5
Q ss_pred CCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCC
Q 009940 12 NPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGF 91 (522)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 91 (522)
+..++.++||+||+..++.... .|.||++.++..+ . ..+++..|+.++.|+
T Consensus 43 ~~~~~~~vLL~~r~~~~~~~~g---------~w~lPgG~ve~gE--s------------------~~~aa~REl~EEtGl 93 (194)
T 1nqz_A 43 TREADPRVLLTVRSSELPTHKG---------QIAFPGGSLDAGE--T------------------PTQAALREAQEEVAL 93 (194)
T ss_dssp ESSSSCBBCEEEEC------CC---------CEECSEEECCTTC--C------------------HHHHHHHHHHHHHCC
T ss_pred ecCCCeEEEEEEecCCCCCCCC---------eEECCcccCCCCC--C------------------HHHHHHHHHHHHHCC
Confidence 4454568999999875544455 8999999998543 3 137799999999999
Q ss_pred eeccCcce-eecccccCCCCCCCCceeEEEEEeEcCC------CCCCcccccccccHHHH-HH
Q 009940 92 GVRDGGEW-KLWKCVEEPEFGPGLTIHTVYIMGKLLD------GNQILQEGCKWMSTQSC-IN 146 (522)
Q Consensus 92 ~l~~~~l~-~~~~w~~~~~~~~~~r~dT~ff~a~~p~------~~~~e~~~~~W~~~~~a-l~ 146 (522)
.+....+. .+.+..+ ..++...+|++.++. -+..|..+..|+++.+. ++
T Consensus 94 ~~~~~~~l~~~~~~~~------~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 150 (194)
T 1nqz_A 94 DPAAVTLLGELDDVFT------PVGFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAV 150 (194)
T ss_dssp CGGGCEEEEECCCEEE------TTTEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHS
T ss_pred CccceEEEEEccCccC------CCCeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccC
Confidence 87643322 2222222 246777888888762 15678889999999987 65
No 94
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=97.27 E-value=0.00024 Score=62.78 Aligned_cols=107 Identities=14% Similarity=0.087 Sum_probs=66.1
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
++++-+.. + ++||+||.+++. +. ..|.||++.++. +|. ..+++..|+.
T Consensus 9 ~vi~~~~~-~-~vLLv~~~r~~~-~~---------~~w~~PgG~ve~--gEt------------------~~~aa~REl~ 56 (145)
T 2w4e_A 9 FILPVTAQ-G-EAVLIRQFRYPL-RA---------TITEIVAGGVEK--GED------------------LGAAAARELL 56 (145)
T ss_dssp EEEEEETT-S-EEEEEEEEETTT-TE---------EEEECEEEECCT--TCC------------------HHHHHHHHHH
T ss_pred EEEEEcCC-C-EEEEEEEEecCC-CC---------CEEEeCCccCCC--CCC------------------HHHHHHHHHH
Confidence 34444433 4 799999876653 22 389999999985 344 1367999999
Q ss_pred HHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeE-cCCC----CCCcccccccccHHHHHHHHHh
Q 009940 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGK-LLDG----NQILQEGCKWMSTQSCINCLAE 150 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~-~p~~----~~~e~~~~~W~~~~~al~~l~~ 150 (522)
++.|+... .+..+..+...+ +.. .....+|++. +..+ +..|..+..|+++.++.+++.+
T Consensus 57 EEtGl~~~--~~~~l~~~~~~~--~~~-~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~ 120 (145)
T 2w4e_A 57 EEVGGAAS--EWVPLPGFYPQP--SIS-GVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRMLEA 120 (145)
T ss_dssp HHHCEECS--EEEECCCBBSCT--TTC-CCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHHHH
T ss_pred HhhCCccC--eEEEEecCcCCC--Ccc-CceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHHc
Confidence 99999864 233333333322 211 2234556555 3322 5678889999999999988764
No 95
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=97.26 E-value=0.00032 Score=65.61 Aligned_cols=104 Identities=16% Similarity=0.240 Sum_probs=66.5
Q ss_pred hhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHH
Q 009940 8 LILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILE 87 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 87 (522)
.+|-+..++ ++||+|+..|. ...|.||++.++. +|. ..+++..|+.+
T Consensus 31 ~~v~~~~~~-~vLL~~r~~~~------------~g~w~lPGG~ve~--gEs------------------~~~aA~REl~E 77 (199)
T 3h95_A 31 GAVFDESTR-KILVVQDRNKL------------KNMWKFPGGLSEP--EED------------------IGDTAVREVFE 77 (199)
T ss_dssp EEEEETTTT-EEEEEEESSSS------------TTSBBCCEEECCT--TCC------------------HHHHHHHHHHH
T ss_pred EEEEeCCCC-EEEEEEEcCCC------------CCCEECCccccCC--CCC------------------HHHHHHHHHHH
Confidence 344444434 99999986641 2399999999986 444 13779999999
Q ss_pred HcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC------CCCcccccccccHHHHHHH
Q 009940 88 QLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG------NQILQEGCKWMSTQSCINC 147 (522)
Q Consensus 88 ~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~------~~~e~~~~~W~~~~~al~~ 147 (522)
+.|+.+....+..+..+.+.+ +.. ..-+.||++.+..+ +..|..+++|+++.+..++
T Consensus 78 EtGl~~~~~~l~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 140 (199)
T 3h95_A 78 ETGIKSEFRSVLSIRQQHTNP--GAF-GKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKT 140 (199)
T ss_dssp HHCCCEEEEEEEEEEECC------------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHC
T ss_pred HhCCccccceEEEEEeeecCC--CCc-eeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhh
Confidence 999998866665543333333 212 22234555554322 5678999999999988774
No 96
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=97.25 E-value=0.0003 Score=61.69 Aligned_cols=107 Identities=10% Similarity=0.139 Sum_probs=71.6
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.+++|-+..++ ++||+||+.. . ..|.||++.++. +|+ ..+++..++
T Consensus 12 v~~~i~~~~~~-~vLl~~r~~~----~---------g~w~~PgG~ve~--gE~------------------~~~aa~RE~ 57 (150)
T 2o1c_A 12 ILVVIYAQDTK-RVLMLQRRDD----P---------DFWQSVTGSVEE--GET------------------APQAAMREV 57 (150)
T ss_dssp EEEEEEETTTC-EEEEEECSSS----T---------TCEESEEEECCT--TCC------------------HHHHHHHHH
T ss_pred EEEEEEeCCCC-EEEEEEecCC----C---------CceECCccccCC--CCC------------------HHHHHHHHH
Confidence 34555555434 8999998764 2 389999999985 444 126789999
Q ss_pred HHHcCCeeccCcc--ee---------ecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHHHHH
Q 009940 86 LEQLGFGVRDGGE--WK---------LWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINC 147 (522)
Q Consensus 86 l~~~gl~l~~~~l--~~---------~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al~~ 147 (522)
.++.|+.+....+ .. +..|...-. .......+.+|.+....+ ...|..+..|+++.++.+.
T Consensus 58 ~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 132 (150)
T 2o1c_A 58 KEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYA-PGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAAL 132 (150)
T ss_dssp HHHHCCCHHHHTCCEEEEEEEEEEECCGGGGGGBC-TTCCEEEEEEEEEEESSCCCCCCSSSSCEEEEEHHHHHHH
T ss_pred HHHhCCCccccceeEEeeeceeeeeeecccccccC-CCCcceEEEEEEEEcCCCCCcChhHhhccEeecHHHHHhh
Confidence 9999999876432 11 112211110 112356778888888766 3478999999999998874
No 97
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=97.24 E-value=0.00016 Score=66.42 Aligned_cols=95 Identities=13% Similarity=0.008 Sum_probs=66.8
Q ss_pred eeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCc
Q 009940 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~ 97 (522)
++||+||...+ .. ..|.||++.++.. |. ..+++..++.++.|+.+....
T Consensus 37 ~vLL~~r~~~~--~~---------g~W~lPgG~ve~g--Es------------------~~~aa~REl~EEtGl~~~~~~ 85 (176)
T 3q93_A 37 RVLLGMKKRGF--GA---------GRWNGFGGKVQEG--ET------------------IEDGARRELQEESGLTVDALH 85 (176)
T ss_dssp EEEEEEECSST--TT---------TSEECEEEECCTT--SC------------------HHHHHHHHHHHHHSCEESCCE
T ss_pred EEEEEEEcCCC--CC---------CeEECceecCCCC--CC------------------HHHHHHHHHHHHHCCcceeeE
Confidence 99999986654 33 3999999998853 33 136789999999999986554
Q ss_pred ceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCcccccccccHHHHHH
Q 009940 98 EWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 98 l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (522)
+.....+..+ +.+..+...+|++...++ ...|..+..|+++.+..+
T Consensus 86 ~l~~~~~~~~---~~~~~~~~~~f~~~~~~~~~~~~e~~~~~W~~~~el~~ 133 (176)
T 3q93_A 86 KVGQIVFEFV---GEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPF 133 (176)
T ss_dssp EEEEEEEEET---TCSCEEEEEEEEESCEESCCCCCSSEEEEEEETTCCCG
T ss_pred EEEEEEEEcC---CCCcEEEEEEEEEECCCCCcCCCcceeeEEeeHHHccc
Confidence 4443333332 334577788898887766 445666779999877543
No 98
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=97.22 E-value=0.0004 Score=61.96 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=70.7
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
+++|.+.. + ++||+||+.. +.... +|.||++.++..+ . ..+++..++.
T Consensus 33 ~~~i~~~~-~-~vLL~~r~~~-~~~~g---------~w~~PgG~ve~gE--~------------------~~~aa~RE~~ 80 (158)
T 3hhj_A 33 ACALLDQD-N-RVLLTQRPEG-KSLAG---------LWEFPGGKVEQGE--T------------------PEASLIRELE 80 (158)
T ss_dssp EEEEBCTT-S-EEEEEECCCT-TSCCC---------CCBCCEEECCTTC--C------------------HHHHHHHHHH
T ss_pred EEEEEeCC-C-EEEEEEeCCC-CCCCC---------EEECCceeecCCC--C------------------HHHHHHHHHH
Confidence 34444433 4 8999998753 22344 9999999987533 3 1367889999
Q ss_pred HHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCcccccccccHHHHHH
Q 009940 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (522)
++.|+.+....+..+.... .. .....+...+|++....+ +..|..+..|+++.+..+
T Consensus 81 EEtGl~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 139 (158)
T 3hhj_A 81 EELGVHVQADNLFPLTFAS-HG--YETFHLLMPLYFCSHYKGVAQGREGQNLKWIFINDLDK 139 (158)
T ss_dssp HHHCCBCCGGGCEEEEEEE-EE--CSSCEEEEEEEEESCCBSCCCCTTSCEEEEEEGGGGGG
T ss_pred HHhCcEeecceEEEEEEEe-ec--cCCcEEEEEEEEEEECCCccCCccccceEEEcHHHHhh
Confidence 9999998877553332211 11 223577788888888776 567888999999876543
No 99
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=97.21 E-value=0.00032 Score=64.90 Aligned_cols=114 Identities=10% Similarity=0.082 Sum_probs=73.4
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCC-CccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDL-PAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
+++|.+.. + ++||.||+........ .|+| |++.++.. |. ..+++..++
T Consensus 36 ~~~i~~~~-g-~vLl~~R~~~~~~~~g---------~w~~~PgG~ve~g--Et------------------~~~aa~REl 84 (190)
T 1hzt_A 36 SSWLFNAK-G-QLLVTRRALSKKAWPG---------VWTNSVCGHPQLG--ES------------------NEDAVIRRC 84 (190)
T ss_dssp EEEEECTT-C-CEEEEEECTTCSSSTT---------CEEESEEECCCTT--CC------------------HHHHHHHHH
T ss_pred EEEEEcCC-C-EEEEEEeCCCCCCCCC---------cccCcccccCCCC--CC------------------HHHHHHHHH
Confidence 44555533 4 8999998765544445 9999 99999763 33 136799999
Q ss_pred HHHcCCeeccC-cceeecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHHHHHHHhc
Q 009940 86 LEQLGFGVRDG-GEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINCLAEV 151 (522)
Q Consensus 86 l~~~gl~l~~~-~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al~~l~~~ 151 (522)
.++.|+.+..- ....-..+..+..-+...+.-+.+|++..+.. +..|....+|+++.+..+.+..-
T Consensus 85 ~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 154 (190)
T 1hzt_A 85 RYELGVEITPPESIYPDFRYRATDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDAT 154 (190)
T ss_dssp HHHHCCCBSCCEEEETTCEEEEECTTSCEEEEECCEEEEEBCSCCCCCTTTEEEEEEECHHHHHHHHHHC
T ss_pred HHHHCCCchhhheeeeeEEEEeeCCCCCcceEEEEEEEEecCCCCcCCccceeeEEEecHHHHHHHHHcC
Confidence 99999987753 11111112211100112244456778887544 56788899999999999887653
No 100
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=97.21 E-value=0.00026 Score=62.40 Aligned_cols=95 Identities=13% Similarity=0.159 Sum_probs=69.8
Q ss_pred ceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccC
Q 009940 17 SEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDG 96 (522)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~ 96 (522)
.++||+||+.. +...+ +|.||++.++..+ . ...++..++.++.|+.+...
T Consensus 33 ~~vLl~~r~~~-~~~~g---------~w~~PgG~ve~gE--~------------------~~~aa~RE~~EE~Gl~~~~~ 82 (153)
T 3ees_A 33 GKILVGQRPEN-NSLAG---------QWEFPGGKIENGE--T------------------PEEALARELNEELGIEAEVG 82 (153)
T ss_dssp TEEEEEECCTT-STTTT---------CEECSEEECCTTC--C------------------HHHHHHHHHHHHHSCEEECC
T ss_pred CEEEEEEeCCC-CCCCC---------eEECCceeeCCCC--C------------------HHHHHHHHHHHHHCCccccC
Confidence 39999999765 23344 9999999987533 2 13678899999999998777
Q ss_pred cceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCcccccccccHHHHHH
Q 009940 97 GEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 97 ~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (522)
.+.....+..+ .+.+...+|.+...++ +..|..+..|+++.+..+
T Consensus 83 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 129 (153)
T 3ees_A 83 ELKLACTHSYG-----DVGILILFYEILYWKGEPRAKHHMMLEWIHPEELKH 129 (153)
T ss_dssp CEEEEEEEEET-----TEEEEEEEEEECEEESCCCCSSSSEEEEECGGGGGG
T ss_pred ceEEEEEEecC-----CCeEEEEEEEEEECCCCcCCCccceEEEecHHHhhh
Confidence 65554444333 3577788999888777 567888999999877543
No 101
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=97.19 E-value=0.00025 Score=62.19 Aligned_cols=103 Identities=16% Similarity=0.229 Sum_probs=66.3
Q ss_pred hhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHH
Q 009940 8 LILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILE 87 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 87 (522)
++|.+..++ ++||+|+++ ..|.||++.++. +|. ..+++..++.+
T Consensus 23 ~vi~~~~~~-~vLl~~r~~---------------g~w~~PgG~ve~--gE~------------------~~~aa~RE~~E 66 (148)
T 2azw_A 23 IIVSKPENN-TMVLVQAPN---------------GAYFLPGGEIEG--TET------------------KEEAIHREVLE 66 (148)
T ss_dssp EECEEGGGT-EEEEEECTT---------------SCEECSEEECCT--TCC------------------HHHHHHHHHHH
T ss_pred EEEECCCCC-eEEEEEcCC---------------CCEeCCCcccCC--CCC------------------HHHHHHHHHHH
Confidence 455544334 999999731 389999999985 333 12678999999
Q ss_pred HcCCeeccCcce-eecccccCCCCCCC-CceeEEEEEeEcCCC---CCCcccccccccHHHHHHH
Q 009940 88 QLGFGVRDGGEW-KLWKCVEEPEFGPG-LTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINC 147 (522)
Q Consensus 88 ~~gl~l~~~~l~-~~~~w~~~~~~~~~-~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al~~ 147 (522)
+.|+.+....+. .+..+..+.. +.. ....+.||.+....+ ...|..+..|+++.++.+.
T Consensus 67 EtGl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 130 (148)
T 2azw_A 67 ELGISVEIGCYLGEADEYFYSNH-RQTAYYNPGYFYVANTWRQLSEPLERTNTLHWVAPEEAVRL 130 (148)
T ss_dssp HHSEEEEEEEEEEEEEEEEEETT-TTEEEEEEEEEEEEEEEEECSSCC-CCSEEEEECHHHHHHH
T ss_pred HhCCeeEeeeEEEEEEEEEcCCC-CCcceEEEEEEEEEEcCcCCcCCCCceeeEEEeeHHHHHhh
Confidence 999987654432 2322333320 111 223477788877654 4467779999999998775
No 102
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=97.19 E-value=0.00032 Score=61.34 Aligned_cols=105 Identities=19% Similarity=0.250 Sum_probs=71.7
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
+++|.+.. + ++||+||+... .... +|.||++.++. +|. ..+++..++.
T Consensus 12 ~~vi~~~~-~-~vLl~~r~~~~-~~~g---------~w~lPgG~ve~--gE~------------------~~~aa~RE~~ 59 (144)
T 3r03_A 12 AAALIDPD-G-RVLLAQRPPGK-SLAG---------LWEFPGGKLEP--GET------------------PEAALVRELA 59 (144)
T ss_dssp EEEEBCTT-S-CEEEEECCTTS-SSTT---------CEECSEEECCT--TCC------------------HHHHHHHHHH
T ss_pred EEEEEcCC-C-EEEEEEeCCCC-CCCC---------cEECCCcEecC--CCC------------------HHHHHHHHHH
Confidence 34445433 4 89999987542 2334 99999999875 333 1367889999
Q ss_pred HHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCcccccccccHHHHHH
Q 009940 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (522)
++.|+.+....+..+..... . ...+++...+|.+....+ ...|.....|+++.+..+
T Consensus 60 EE~Gl~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 118 (144)
T 3r03_A 60 EELGVDTRASCLAPLAFASH-S--YDTFHLLMPLYACRSWRGRATAREGQTLAWVRAERLRE 118 (144)
T ss_dssp HHHCCBCCGGGCEEEEEEEE-E--CSSSEEEEEEEEECCCBSCCCCCSSCEEEEECGGGGGG
T ss_pred HHhCceeeccceEEEEeeec-c--CCCeEEEEEEEEEEecCCccCCCCcceEEEEeHHHhcc
Confidence 99999988775544422211 1 234678888999888776 557788899999877544
No 103
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=97.19 E-value=0.00021 Score=63.93 Aligned_cols=98 Identities=13% Similarity=0.169 Sum_probs=65.5
Q ss_pred eeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCc
Q 009940 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~ 97 (522)
++||+||+..| ..|++|++.++.. |. ..+++..++.++.|+.+. ..
T Consensus 27 ~vLl~~r~~~~-------------g~w~~PgG~ve~g--E~------------------~~~aa~RE~~EEtGl~~~-~~ 72 (165)
T 1f3y_A 27 KIFAASRLDIP-------------DAWQMPQGGIDEG--ED------------------PRNAAIRELREETGVTSA-EV 72 (165)
T ss_dssp CEEEEEETTEE-------------EEEECCEEECCTT--CC------------------HHHHHHHHHHHHHCCCSE-EE
T ss_pred cEEEEecCCCC-------------CcEECCeeccCCC--CC------------------HHHHHHHHHHHhhCCChh-hh
Confidence 89999997422 3899999999753 33 126799999999999763 12
Q ss_pred ceeecccccCCCCCCC--------------CceeEEEEEeEcCCC-----------CCCcccccccccHHHHHHHHHhc
Q 009940 98 EWKLWKCVEEPEFGPG--------------LTIHTVYIMGKLLDG-----------NQILQEGCKWMSTQSCINCLAEV 151 (522)
Q Consensus 98 l~~~~~w~~~~~~~~~--------------~r~dT~ff~a~~p~~-----------~~~e~~~~~W~~~~~al~~l~~~ 151 (522)
......|++.. .+. ..-...||++.+..+ +..|..+.+|+++.++.+++..+
T Consensus 73 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 149 (165)
T 1f3y_A 73 IAEVPYWLTYD--FPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVEF 149 (165)
T ss_dssp EEECSSCCBCC--CCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCGG
T ss_pred hcccccceeee--cCccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhhh
Confidence 22233333322 111 112567888887654 24588999999999999876543
No 104
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=97.09 E-value=0.00043 Score=65.42 Aligned_cols=113 Identities=18% Similarity=0.271 Sum_probs=72.8
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
++++-++.++ ++||+||.++|... .......|.||++.++. ||. ..+++..|+.
T Consensus 61 ~vl~~~~~~~-~vLLvrq~R~~~~~-----~~~~~~~welPgG~ve~--gE~------------------~~~aA~REl~ 114 (209)
T 1g0s_A 61 VLLPFDPVRD-EVVLIEQIRIAAYD-----TSETPWLLEMVAGMIEE--GES------------------VEDVARREAI 114 (209)
T ss_dssp EEEEEETTTT-EEEEEEEECGGGGG-----GSSCSEEEECEEEECCT--TCC------------------HHHHHHHHHH
T ss_pred EEEEEECCCC-EEEEEEeecccCCC-----CCCCCeEEEeCcccCCC--CcC------------------HHHHHHHHHH
Confidence 4455565545 99999998876432 11113389999999985 444 1367999999
Q ss_pred HHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcC----CC-----CCCcccccccccHHHHHHHHHh
Q 009940 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLL----DG-----NQILQEGCKWMSTQSCINCLAE 150 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p----~~-----~~~e~~~~~W~~~~~al~~l~~ 150 (522)
++.|+... .+.++....+.+ +- ..-...+|+|... .+ +..|..+..|++..++.+++.+
T Consensus 115 EEtGl~~~--~~~~l~~~~~~~--g~-~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~ 182 (209)
T 1g0s_A 115 EEAGLIVK--RTKPVLSFLASP--GG-TSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEE 182 (209)
T ss_dssp HHHCCCCC--CEEEEEEEESCT--TT-BCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHT
T ss_pred HHcCcccC--cEEEeEEEecCC--Cc-cCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHc
Confidence 99999863 334444333333 21 1234567777741 11 5677789999999999998765
No 105
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=97.08 E-value=0.00031 Score=63.63 Aligned_cols=100 Identities=18% Similarity=0.270 Sum_probs=65.4
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.+++|.+ ++ ++||+||+.. ...|.||++.++. +|. ..+++..|+
T Consensus 26 v~~ii~~--~~-~vLL~~r~~~-------------~~~w~~PgG~ve~--gEs------------------~~~aa~REl 69 (171)
T 3id9_A 26 VTGILIE--DE-KVLLVKQKVA-------------NRDWSLPGGRVEN--GET------------------LEEAMIREM 69 (171)
T ss_dssp EEEEEEE--TT-EEEEEECSST-------------TCCEECCEEECCT--TCC------------------HHHHHHHHH
T ss_pred EEEEEEE--CC-EEEEEEEECC-------------CCeEECCCccCCC--CCC------------------HHHHHHHHH
Confidence 4455553 34 9999999872 3499999999875 333 136789999
Q ss_pred HHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC---------CCCcccccccccHHHHHH
Q 009940 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---------NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 86 l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~---------~~~e~~~~~W~~~~~al~ 146 (522)
.++.|+.+....+.....+.. ... .....+|.+....+ +..|..+..|+++.+..+
T Consensus 70 ~EEtGl~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~ 134 (171)
T 3id9_A 70 REETGLEVKIKKLLYVCDKPD----ASP-SLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSY 134 (171)
T ss_dssp HHHHCCCEEEEEEEEEEEETT----SSS-CEEEEEEEEEEC-------------CCCCCEEEEETGGGGG
T ss_pred HHHHCCccccceEEEEEcccC----CCC-cEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhh
Confidence 999999987655544333221 222 34455666665544 347888999999988765
No 106
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=97.07 E-value=0.00031 Score=65.13 Aligned_cols=99 Identities=21% Similarity=0.226 Sum_probs=70.2
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.++||.+ ++ ++||+||+.+|. .. .|.||++.++.. |. ..+++..++
T Consensus 43 v~~ii~~--~~-~vLL~~r~~~~~--~g---------~w~lPgG~ve~g--Es------------------~~~aa~REl 88 (189)
T 3cng_A 43 VGCIPEW--EN-KVLLCKRAIAPY--RG---------KWTLPAGFMENN--ET------------------LVQGAARET 88 (189)
T ss_dssp EEEEEEE--TT-EEEEEEESSSSS--TT---------CEECSEEECCTT--CC------------------HHHHHHHHH
T ss_pred EEEEEEe--CC-EEEEEEccCCCC--CC---------eEECceeeccCC--CC------------------HHHHHHHHH
Confidence 3455554 34 999999988652 33 899999999853 33 136799999
Q ss_pred HHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHHH
Q 009940 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCI 145 (522)
Q Consensus 86 l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al 145 (522)
.++.|+.+....+..+..+ + ....-+.+|++....+ ...|..+..|+++.+..
T Consensus 89 ~EEtGl~~~~~~~~~~~~~--~-----~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 89 LEEANARVEIRELYAVYSL--P-----HISQVYMLFRAKLLDLDFFPGIESLEVRLFGEQEIP 144 (189)
T ss_dssp HHHHCCCEEEEEEEEEEEE--G-----GGTEEEEEEEEEECCSCCCCCTTEEEEEEECTTTCC
T ss_pred HHHHCCccccceeEEEEec--C-----CCcEEEEEEEEEeCCCccCCCccceeEEEECHHHcC
Confidence 9999999876655444222 2 2356677888888776 35678899999987654
No 107
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=97.04 E-value=0.00042 Score=63.54 Aligned_cols=107 Identities=17% Similarity=0.087 Sum_probs=70.9
Q ss_pred hhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHH
Q 009940 8 LILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILE 87 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 87 (522)
+++-+.. + ++||+||.+++ .+. ..|.||++.++. +|. ..+++..|+.+
T Consensus 46 v~i~~~~-~-~vLL~~r~~~~-~~~---------~~w~~PgG~ve~--gEs------------------~~~aa~REl~E 93 (182)
T 2yvp_A 46 VLPVTER-G-TALLVRQYRHP-TGK---------FLLEVPAGKVDE--GET------------------PEAAARRELRE 93 (182)
T ss_dssp EEEBCTT-S-EEEEEEEEEGG-GTE---------EEEECCEEECCT--TCC------------------HHHHHHHHHHH
T ss_pred EEEEcCC-C-EEEEEEeccCC-CCC---------cEEEeccccCCC--CcC------------------HHHHHHHHHHH
Confidence 4444433 4 89999997654 233 399999999985 333 13679999999
Q ss_pred HcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCC--C----CCCcccccccccHHHHHHHHHhc
Q 009940 88 QLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLD--G----NQILQEGCKWMSTQSCINCLAEV 151 (522)
Q Consensus 88 ~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~--~----~~~e~~~~~W~~~~~al~~l~~~ 151 (522)
+.|+.+. .+..+..+...+ +. ....+.+|++.... + +..|..+..|+++.++.+++..-
T Consensus 94 EtGl~~~--~~~~l~~~~~~~--~~-~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 158 (182)
T 2yvp_A 94 EVGAEAE--TLIPLPSFHPQP--SF-TAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKG 158 (182)
T ss_dssp HHCEECS--CEEECCCBCSCT--TT-BCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHTT
T ss_pred HhCCCcc--cEEEEEEEeCCC--Cc-cccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 9999865 334444443322 22 23445566665321 2 66788999999999999987643
No 108
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=97.01 E-value=0.0004 Score=62.50 Aligned_cols=98 Identities=13% Similarity=0.007 Sum_probs=61.2
Q ss_pred eeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCc
Q 009940 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~ 97 (522)
++||+||+........ .|.||++.++..+ . ..+++..|+.++.|+.+....
T Consensus 40 ~vLL~~r~~~~~~~~g---------~w~lPgG~ve~gE--~------------------~~~aa~REl~EEtGl~~~~~~ 90 (165)
T 3oga_A 40 CYLLCKMADNRGVFPG---------QWALSGGGVEPGE--R------------------IEEALRREIREELGEQLILSD 90 (165)
T ss_dssp EEEEEEECC------C---------CEECCCEECCTTC--C------------------HHHHHHHHHHHHHCSSCCEEE
T ss_pred EEEEEEecCCCCCCCC---------eEECCccccCCCC--C------------------HHHHHHHHHHHHhCCCccccc
Confidence 8999998866555555 9999999987533 3 136789999999999987766
Q ss_pred ceeec------ccccCCCCCCCCcee--EEEEEeEcCCC---CCCcccccccccHHHHHH
Q 009940 98 EWKLW------KCVEEPEFGPGLTIH--TVYIMGKLLDG---NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 98 l~~~~------~w~~~~~~~~~~r~d--T~ff~a~~p~~---~~~e~~~~~W~~~~~al~ 146 (522)
+..+. .+..+. +....+. ..+|.+....+ ...|..+..|+++.+..+
T Consensus 91 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 148 (165)
T 3oga_A 91 ITPWTFRDDIRIKTYAD--GRQEEIYMIYLIFDCVSANRDICINDEFQDYAWVKPEELAL 148 (165)
T ss_dssp EEEEEEEEEEEEEEC----CCEEEEEEEEEEEEEEESCCCCCCCTTEEEEEEECGGGGGG
T ss_pred eeeeeeecceeeEecCC--CCceeEEEEEEEEEeeccCCCccCCchheeeEEccHHHHhh
Confidence 65442 122222 1111122 33555666555 346888999999887654
No 109
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=96.99 E-value=0.00045 Score=61.41 Aligned_cols=99 Identities=18% Similarity=0.249 Sum_probs=66.6
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.++++.+.. + ++||+||+.+| .. ..|.||++.++.. |. ..+++..|+
T Consensus 23 v~~~i~~~~-~-~vLl~~r~~~~--~~---------~~w~~PgG~ve~g--E~------------------~~~aa~REl 69 (156)
T 3gg6_A 23 VLAVFLSEQ-D-EVLLIQEAKRE--CR---------GSWYLPAGRMEPG--ET------------------IVEALQREV 69 (156)
T ss_dssp EEEECBCTT-S-EEEEEECCCTT--ST---------TCEECSEEECCTT--CC------------------HHHHHHHHH
T ss_pred EEEEEEeCC-C-EEEEEEecCCC--CC---------CEEECCeeeccCC--CC------------------HHHHHHHHH
Confidence 445555543 4 99999998655 23 3999999998753 33 136789999
Q ss_pred HHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC-------CCCcccccccccHHHHH
Q 009940 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-------NQILQEGCKWMSTQSCI 145 (522)
Q Consensus 86 l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~-------~~~e~~~~~W~~~~~al 145 (522)
.++.|+.+....+.... .. ...+-+.+|++....+ +..|.....|+++.+..
T Consensus 70 ~EEtGl~~~~~~~~~~~---~~-----~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~ 128 (156)
T 3gg6_A 70 KEEAGLHCEPETLLSVE---ER-----GPSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLP 128 (156)
T ss_dssp HHHHCEEEEEEEEEEEE---ES-----STTEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCC
T ss_pred HHhhCceeEeeeEEEEE---cC-----CCCEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCc
Confidence 99999987655433221 11 1234556777776554 44688899999887643
No 110
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=96.94 E-value=0.0012 Score=60.16 Aligned_cols=107 Identities=12% Similarity=0.076 Sum_probs=70.6
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCC-CccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDL-PAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
+++|.+.. + ++||.||++......+ .|.| |++.++.. |. ..+++..++
T Consensus 41 ~v~i~~~~-~-~vLl~~R~~~~~~~~g---------~w~l~pGG~ve~g--E~------------------~~~aa~REl 89 (180)
T 2fkb_A 41 YIVVHDGM-G-KILVQRRTETKDFLPG---------MLDATAGGVVQAD--EQ------------------LLESARREA 89 (180)
T ss_dssp EEEEECSS-S-CEEEEEECSSCSSSTT---------CEESSBCCBCBTT--CC------------------HHHHHHHHH
T ss_pred EEEEECCC-C-EEEEEECCCCCccCCC---------cEEeecCCCCCCC--CC------------------HHHHHHHHH
Confidence 45556544 4 7999888775444445 8999 99998753 33 136799999
Q ss_pred HHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHHHHHHH
Q 009940 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINCLA 149 (522)
Q Consensus 86 l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al~~l~ 149 (522)
.++.|+.... +..+..+.... + ..++...+|++..... +..|.....|+++.+..+.+.
T Consensus 90 ~EEtGl~~~~--~~~l~~~~~~~--~-~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 151 (180)
T 2fkb_A 90 EEELGIAGVP--FAEHGQFYFED--K-NCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCD 151 (180)
T ss_dssp HHHHCCBSCC--CEEEEEEEEEE--T-TEEEEEEEEEEECCCCCCCCTTTEEEEEEECHHHHHTTGG
T ss_pred HHHHCCCccc--eEEEEEEEecC--C-CceEEEEEEEEecCCCcCCChhHhheEEEecHHHHHHHHH
Confidence 9999997543 22232322222 1 2456667777774332 567888999999999887654
No 111
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=96.91 E-value=0.00079 Score=58.36 Aligned_cols=94 Identities=17% Similarity=0.270 Sum_probs=63.3
Q ss_pred eeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCc
Q 009940 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~ 97 (522)
++||+||+..+. ... +|.||++.++. +|. ..+++..++.++.|+.+....
T Consensus 21 ~vLl~~r~~~~~-~~g---------~w~lPgG~ve~--gE~------------------~~~aa~RE~~EE~Gl~~~~~~ 70 (140)
T 2rrk_A 21 KILLAQRPAQSD-QAG---------LWEFAGGKVEP--DES------------------QRQALVRELREELGIEATVGE 70 (140)
T ss_dssp EEEEEECCSSCS-CCC---------CEECCEEECCT--TSC------------------HHHHHHHHHHHHSCEEEECCE
T ss_pred EEEEEEcCCCCC-CCC---------EEECCceecCC--CCC------------------HHHHHHHHHHHHHCCeeeccc
Confidence 899999865432 234 99999999875 333 136688999999999876543
Q ss_pred ceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCcccccccccHHHHHH
Q 009940 98 EWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 98 l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (522)
+.....+..+ .+.....+|.+...++ ...|..+..|+++.+..+
T Consensus 71 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 116 (140)
T 2rrk_A 71 YVASHQREVS-----GRIIHLHAWHVPDFHGTLQAHEHQALVWCSPEEALQ 116 (140)
T ss_dssp EEEEEEEEET-----TEEEEEEEEEESEEEECCCCSSCSCEEEECHHHHTT
T ss_pred EEEEEEEecC-----CcEEEEEEEEEEeeCCCcCCCccceeEEeCHHHHhh
Confidence 3222222221 3456777888776554 446778899999887654
No 112
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.00063 Score=59.69 Aligned_cols=103 Identities=19% Similarity=0.351 Sum_probs=65.1
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
+++|-+..++ ++||+|+.. ...|.||++.++. +|+ ..+++..++.
T Consensus 8 ~~~i~~~~~~-~vLl~~r~~--------------~g~w~~PgG~ve~--gEs------------------~~~aa~RE~~ 52 (146)
T 2jvb_A 8 GAAIFNENLS-KILLVQGTE--------------SDSWSFPRGKISK--DEN------------------DIDCCIREVK 52 (146)
T ss_dssp EEEEBCTTSS-EEEEECCSS--------------SSCCBCCEECCCS--SSC------------------HHHHHHHHHH
T ss_pred EEEEEeCCCC-EEEEEEEcC--------------CCcEECCcccCCC--CCC------------------HHHHHHHHHH
Confidence 3444444334 999999753 1489999999875 333 1367999999
Q ss_pred HHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC------CCCcccccccccHHHHHHHHH
Q 009940 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG------NQILQEGCKWMSTQSCINCLA 149 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~------~~~e~~~~~W~~~~~al~~l~ 149 (522)
++.|+.+.. +....++.+.. .....+ +.|++..+... +..|..+..|+++.++.+++.
T Consensus 53 EEtGl~~~~--~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 116 (146)
T 2jvb_A 53 EEIGFDLTD--YIDDNQFIERN--IQGKNY-KIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMY 116 (146)
T ss_dssp HHTSCCCSS--SSCSSCEEEEE--ETTEEE-EEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGG
T ss_pred HHHCCCchH--hcccccccccc--cCCceE-EEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhc
Confidence 999998753 23344444432 122233 23444333321 467888999999999887544
No 113
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=96.90 E-value=0.00063 Score=64.29 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=70.9
Q ss_pred hhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHH
Q 009940 9 ILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQ 88 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 88 (522)
++.++.++.++||+||.++|. +. ..|.||++.++. +|. ..+++..|+.++
T Consensus 69 v~~~~~~~~~vlLv~q~R~~~-~~---------~~welPgG~ve~--gEs------------------~~~aA~REl~EE 118 (212)
T 2dsc_A 69 VLQRTLHYECIVLVKQFRPPM-GG---------YCIEFPAGLIDD--GET------------------PEAAALRELEEE 118 (212)
T ss_dssp EEECTTSCCEEEEEEEEEGGG-TE---------EEEECCEEECCT--TCC------------------HHHHHHHHHHHH
T ss_pred EEeCCCCCcEEEEEEeecCCC-CC---------cEEECCccccCC--CCC------------------HHHHHHHHHHHH
Confidence 345554455899999977663 22 389999999985 444 136799999999
Q ss_pred cCCeeccCcceeecccccCCCCCCCCceeEEEEEeEc--C-------CC--CCCcccccccccHHHHHHHHHhcC
Q 009940 89 LGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKL--L-------DG--NQILQEGCKWMSTQSCINCLAEVK 152 (522)
Q Consensus 89 ~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~--p-------~~--~~~e~~~~~W~~~~~al~~l~~~~ 152 (522)
.|+......+ +..+.+.+ +.. .....+|++.. . .. +..|..+..|++..++.+++.+..
T Consensus 119 tGl~~~~~~~--l~~~~~~~--~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~ 188 (212)
T 2dsc_A 119 TGYKGDIAEC--SPAVCMDP--GLS-NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLDALV 188 (212)
T ss_dssp HCCCCEEEEE--CCCEESCT--TTB-CCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHHHHH
T ss_pred hCCCccceEE--eccEEcCC--Ccc-CceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHHhcc
Confidence 9998653322 22222223 211 22345566552 1 22 667899999999999999987554
No 114
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=96.84 E-value=0.00092 Score=65.89 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=72.4
Q ss_pred CceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeecc
Q 009940 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (522)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~ 95 (522)
+.++||+||...|. .. .|.||++.++.. |. ..+++..++.++.|+.+..
T Consensus 55 ~~~VLLv~R~~~p~--~g---------~W~lPGG~ve~g--Es------------------~~~AA~REl~EEtGl~v~~ 103 (273)
T 2fml_A 55 QLKVLLIQRKGHPF--RN---------SWALPGGFVNRN--ES------------------TEDSVLRETKEETGVVISQ 103 (273)
T ss_dssp EEEEEEEEECSSSS--TT---------CEECCEEECCTT--SC------------------HHHHHHHHHHHHHCCCCCG
T ss_pred CcEEEEEEccCCCC--CC---------cEECCccCCCCC--cC------------------HHHHHHHHHHHHHCCCCCc
Confidence 56999999987541 23 899999999863 33 1377999999999998887
Q ss_pred CcceeecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHHH
Q 009940 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCI 145 (522)
Q Consensus 96 ~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al 145 (522)
..+..+..|..+.. .+..++-+.+|++.++.+ ...|..+..|+++.++.
T Consensus 104 ~~l~~l~~~~~~~r-~~~~~~~~~~y~a~~~~~~~~~~~E~~~~~W~~~~e~~ 155 (273)
T 2fml_A 104 ENIEQLHSFSRPDR-DPRGWVVTVSYLAFIGEEPLIAGDDAKEVHWFNLERHG 155 (273)
T ss_dssp GGEEEEEEECCTTS-STTSSEEEEEEEEECCCCCCCCCTTEEEEEEEEEEEET
T ss_pred CcEEEEEEEcCCCC-CCCceEEEEEEEEEeCCCCCCCCcceeeEEEEEhhHhh
Confidence 76666666665541 233367788899988866 45788899999886643
No 115
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=96.76 E-value=0.00099 Score=62.69 Aligned_cols=101 Identities=18% Similarity=0.218 Sum_probs=61.9
Q ss_pred ceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccC
Q 009940 17 SEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDG 96 (522)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~ 96 (522)
.++||+||.+.| .+.. .|.||++.++. .+|+ ..+++..|+.++.|+.+...
T Consensus 55 ~~vLLvrr~r~~-~~~~---------~w~lPgG~ve~-~gEs------------------~~~aa~REl~EEtGl~~~~~ 105 (207)
T 1mk1_A 55 GNIPMVYQYRHT-YGRR---------LWELPAGLLDV-AGEP------------------PHLTAARELREEVGLQASTW 105 (207)
T ss_dssp SEEEEEEEEETT-TTEE---------EEECCEEECCS-TTCC------------------HHHHHHHHHHHHHCEEEEEE
T ss_pred CEEEEEEeecCC-CCCc---------EEEeCCccccC-CCCC------------------HHHHHHHHHHHHHCCccccc
Confidence 389999998776 3333 99999999872 2333 13679999999999987643
Q ss_pred cceeecccccCCCCCCCCceeEEEEEeEcCCC-------CCCcccccccccHHHHHHHHHhc
Q 009940 97 GEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-------NQILQEGCKWMSTQSCINCLAEV 151 (522)
Q Consensus 97 ~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~-------~~~e~~~~~W~~~~~al~~l~~~ 151 (522)
. .+....+.+ +.. .....+|++....+ +..|..+..|+++.++.+++..-
T Consensus 106 ~--~l~~~~~~~--~~~-~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 106 Q--VLVDLDTAP--GFS-DESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp E--EEEEECSCT--TTB-CCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHTT
T ss_pred E--EEEEEEcCC--Ccc-ccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 2 222222222 111 11345666654332 45778899999999999987643
No 116
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=96.76 E-value=0.0004 Score=61.62 Aligned_cols=99 Identities=15% Similarity=0.234 Sum_probs=65.2
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
+++|.+ ++ ++||+|| . ..|.||++.++.. |. ..+++..++.
T Consensus 23 ~~ii~~--~~-~vLl~~r-------~---------~~w~lPgG~ve~g--E~------------------~~~aa~REl~ 63 (154)
T 2pqv_A 23 TALIVQ--NH-KLLVTKD-------K---------GKYYTIGGAIQVN--ES------------------TEDAVVREVK 63 (154)
T ss_dssp EECCEE--TT-EEEEEEE-------T---------TEEECEEEECBTT--CC------------------HHHHHHHHHH
T ss_pred EEEEEE--CC-EEEEEec-------C---------CeEECcccCcCCC--CC------------------HHHHHHHHHH
Confidence 445553 34 9999999 2 2799999999853 33 1367999999
Q ss_pred HHcCCeeccCcceeecc-cccCCCCCCCCceeEEEEEeEcCCC------CCCcccccccccHHHHHH
Q 009940 87 EQLGFGVRDGGEWKLWK-CVEEPEFGPGLTIHTVYIMGKLLDG------NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~~-w~~~~~~~~~~r~dT~ff~a~~p~~------~~~e~~~~~W~~~~~al~ 146 (522)
++.|+.+....+..... ..+.. +..-..-+.+|.+.++.+ ++.|.....|+++.++.+
T Consensus 64 EEtGl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 128 (154)
T 2pqv_A 64 EELGVKAQAGQLAFVVENRFEVD--GVSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQN 128 (154)
T ss_dssp HHHCCCEEEEEEEEEEEEEEEET--TEEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGG
T ss_pred HHhCCeeeeceEEEEEeeeecCC--CCcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhh
Confidence 99999988665543332 22322 211122345788888766 245678899999887655
No 117
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=96.73 E-value=0.0025 Score=56.57 Aligned_cols=104 Identities=14% Similarity=0.292 Sum_probs=64.1
Q ss_pred hhhcCC-CCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 8 LILKNP-LNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 8 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
++|.+. +.+.++||.||+.. ..... +|.||++.++. +|. ...+++..++.
T Consensus 24 ~vi~~~~~~~~~vLl~~R~~~-~~~~g---------~w~~PgG~~e~--gE~-----------------~~~~a~~REl~ 74 (155)
T 1x51_A 24 CVLEQPGALGAQILLVQRPNS-GLLAG---------LWEFPSVTWEP--SEQ-----------------LQRKALLQELQ 74 (155)
T ss_dssp EEEEEECSSSEEEEEEECCCC-STTCS---------CEECCEEECCS--SHH-----------------HHHHHHHHHHH
T ss_pred EEEEecCCCCCEEEEEECCCC-CCCCc---------eecCCccccCC--CCC-----------------HHHHHHHHHHH
Confidence 444433 22348999987643 34445 99999998764 222 11256778999
Q ss_pred HHcC-CeeccCc-ceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCcccccccccHHHHHH
Q 009940 87 EQLG-FGVRDGG-EWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 87 ~~~g-l~l~~~~-l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (522)
++.| +...... +..+.|- | ..++....+|.+.+..+ ...|.....|+++.+..+
T Consensus 75 EE~g~l~~~~~~~l~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 132 (155)
T 1x51_A 75 RWAGPLPATHLRHLGEVVHT-----F-SHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHT 132 (155)
T ss_dssp HHSCCCCSTTCEECCCBCCB-----C-SSCEEEEEEEEEECSSCCCCCCCCTTEEEEEHHHHHH
T ss_pred HHhCCcceeeeeecceEEEe-----c-CCccEEEEEEEEEEcCCCCCCCCCCccEEccHHHhhh
Confidence 9999 6543221 1122221 1 23466677888888765 345677889999887755
No 118
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=96.73 E-value=0.00091 Score=62.42 Aligned_cols=100 Identities=17% Similarity=0.228 Sum_probs=64.3
Q ss_pred hhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHH
Q 009940 9 ILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQ 88 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 88 (522)
++++.. +.++||+||...| ..|.||++.++. +|. ..+++..|+.++
T Consensus 47 i~~~~~-~~~vLLv~r~~~~-------------g~W~lPgG~ve~--gEt------------------~~eaa~REl~EE 92 (194)
T 2fvv_A 47 CFRSES-EEEVLLVSSSRHP-------------DRWIVPGGGMEP--EEE------------------PSVAAVREVCEE 92 (194)
T ss_dssp EESSTT-CCEEEEEECSSCT-------------TSEECSEEECCT--TCC------------------HHHHHHHHHHHH
T ss_pred EEEECC-CCEEEEEEEeCCC-------------CcEECCCCcCCC--CcC------------------HHHHHHHHHHHH
Confidence 334444 3499999997532 279999999985 333 137899999999
Q ss_pred cCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC-CC-----CcccccccccHHHHHHHHH
Q 009940 89 LGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-NQ-----ILQEGCKWMSTQSCINCLA 149 (522)
Q Consensus 89 ~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~-~~-----~e~~~~~W~~~~~al~~l~ 149 (522)
.|+.+....+. ..+-.+. +...+.+|++.++.. +. .+.....|+++.++.+++.
T Consensus 93 tGl~~~~~~~l--~~~~~~~-----~~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~ 152 (194)
T 2fvv_A 93 AGVKGTLGRLV--GIFENQE-----RKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQ 152 (194)
T ss_dssp HCEEEEEEEEE--EEEEETT-----TTEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHT
T ss_pred hCCccccceEE--EEEEcCC-----CceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHh
Confidence 99987654322 2221111 233466677766432 11 1235789999999988764
No 119
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=96.65 E-value=0.00083 Score=59.55 Aligned_cols=103 Identities=12% Similarity=0.146 Sum_probs=67.8
Q ss_pred hhhcC-CCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 8 LILKN-PLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 8 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
++|.+ ..+.+++||.||+..+ +.. |.||++.++.. |. ..+++..++.
T Consensus 13 ~ii~~~~~~~~~vLl~~r~~~~-----------~~g-w~lPgG~ve~g--E~------------------~~~aa~RE~~ 60 (155)
T 2b06_A 13 CLIEDLETQRVVMQYRAPENNR-----------WSG-YAFPGGHVEND--EA------------------FAESVIREIY 60 (155)
T ss_dssp EEEEETTTTEEEEEEEC----------------CCE-EECCCCBCCTT--SC------------------HHHHHHHHHH
T ss_pred EEEEECCCCeEEEEEEECCCCC-----------CCC-EeccceecCCC--CC------------------HHHHHHHHHH
Confidence 44444 2333448888876542 122 89999999853 33 1367899999
Q ss_pred HHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCcccccccccHHHHHH
Q 009940 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (522)
++.|+.+....+....++..+. ..++.+.+|.+..+.+ ...|.....|+++.+..+
T Consensus 61 EEtGl~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 118 (155)
T 2b06_A 61 EETGLTIQNPQLVGIKNWPLDT----GGRYIVICYKATEFSGTLQSSEEGEVSWVQKDQIPN 118 (155)
T ss_dssp HHHSEEEESCEEEEEEEEECTT----SCEEEEEEEEECEEEECCCCBTTBEEEEEEGGGGGG
T ss_pred HHhCccccCCcEEEEEeeccCC----CceEEEEEEEEEecCCCCCCCcceeeEEeeHHHhhh
Confidence 9999998876666555555432 3577788888877665 346788999999887554
No 120
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=96.60 E-value=0.0015 Score=56.73 Aligned_cols=90 Identities=18% Similarity=0.151 Sum_probs=61.0
Q ss_pred eEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCcc
Q 009940 19 FLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGGE 98 (522)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~l 98 (522)
+||+||+..|. .|.||++.++..+ + ..+++..++.++.|+.+....+
T Consensus 27 vLl~~r~~~~~-------------~w~~PgG~ve~gE--~------------------~~~aa~RE~~EEtGl~~~~~~~ 73 (139)
T 2yyh_A 27 IVLIERKYPPV-------------GLALPGGFVEVGE--R------------------VEEAAAREMREETGLEVRLHKL 73 (139)
T ss_dssp EEEEEECSSSC-------------SEECCEEECCTTC--C------------------HHHHHHHHHHHHHCCCCEEEEE
T ss_pred EEEEEecCCCC-------------cEECccccCCCCC--C------------------HHHHHHHHHHHHHCCCcccceE
Confidence 99999986531 2999999998533 3 1367999999999998765433
Q ss_pred eeecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHHH
Q 009940 99 WKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCI 145 (522)
Q Consensus 99 ~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al 145 (522)
. ..+..+. ..+....-+.+|++.. .+ ...|.....|+++.++.
T Consensus 74 ~--~~~~~~~-~~~~~~~~~~~f~~~~-~~~~~~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 74 M--GVYSDPE-RDPRAHVVSVVWIGDA-QGEPKAGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp E--EEECCTT-SCTTSCEEEEEEEEEE-ESCCCCCTTEEEEEEECTTSCC
T ss_pred E--EEECCCC-cCCCceEEEEEEEEec-CCccCCCCCcceEEEEEHHHCC
Confidence 2 2222222 1333455677888887 44 45678899999987654
No 121
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=96.60 E-value=0.0013 Score=61.14 Aligned_cols=104 Identities=12% Similarity=0.202 Sum_probs=62.2
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
+++|-++. +.++||+||+. ...|.||++.++ .||. ..+++..|+.
T Consensus 49 ~~vv~~~~-~~~vLL~~r~~--------------~g~w~lPgG~ve--~gEs------------------~~eaa~REl~ 93 (197)
T 3fcm_A 49 SAFAVNKE-RNKFLMIHHNI--------------YNSWAWTGGHSD--NEKD------------------QLKVAIKELK 93 (197)
T ss_dssp EEEEECTT-SCEEEEEEETT--------------TTEEECEEEECT--TCCB------------------HHHHHHHHHH
T ss_pred EEEEEECC-CCEEEEEEecC--------------CCCEECCccccC--CCCC------------------HHHHHHHHHH
Confidence 44555555 44999999862 128999999998 3554 2377999999
Q ss_pred HHcCCe-ecc--CcceeecccccCCCCCCC--------CceeEEEEEeEcCCC-----CCCcccccccccHHHHHHHH
Q 009940 87 EQLGFG-VRD--GGEWKLWKCVEEPEFGPG--------LTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINCL 148 (522)
Q Consensus 87 ~~~gl~-l~~--~~l~~~~~w~~~~~~~~~--------~r~dT~ff~a~~p~~-----~~~e~~~~~W~~~~~al~~l 148 (522)
++.|+. +.. .....+..+..+. ..+ ..|+..| ++..+.+ +..|..+..|+++.++.+++
T Consensus 94 EEtGl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 168 (197)
T 3fcm_A 94 EETGVKNPTPLLDKAFALDVLTVNG--HIKRGKYVSSHLHLNLTY-LIECSEDETLMLKEDENSGVMWIPFNEISKYC 168 (197)
T ss_dssp HHHCCSSCEESCSSCSEEEEEEECC--EEETTEEECCEEEEEEEE-EEECCTTSCCCCCC----CEEEEEGGGHHHHC
T ss_pred HHHCCCcccccCCCceEEEEeeecC--ccccCcccCCceeEEEEE-EEEeCCCcccCCCcccccceEEccHHHHHhhc
Confidence 999997 432 2222222222222 111 1233444 4455554 45788999999999988764
No 122
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=96.58 E-value=0.00088 Score=66.03 Aligned_cols=102 Identities=15% Similarity=0.186 Sum_probs=66.3
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.++||-++.++ ++||+||.+.+ ..|.||+|.++. ||. ..+++..|+
T Consensus 104 v~avv~~~~~~-~vLLv~r~~~~-------------g~W~lPgG~ve~--gEs------------------~~eAA~REl 149 (271)
T 2a6t_A 104 RGAIMLDMSMQ-QCVLVKGWKAS-------------SGWGFPKGKIDK--DES------------------DVDCAIREV 149 (271)
T ss_dssp EEEEEBCSSSS-EEEEEEESSTT-------------CCCBCSEEECCT--TCC------------------HHHHHHHHH
T ss_pred EEEEEEECCCC-EEEEEEEeCCC-------------CeEECCcccCCC--CcC------------------HHHHHHHHH
Confidence 35667776545 99999997642 279999999986 343 137899999
Q ss_pred HHHcCCeeccCcceeecccccCCCCCCCCceeEEEEEeEc-CCC------CCCcccccccccHHHHHHH
Q 009940 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKL-LDG------NQILQEGCKWMSTQSCINC 147 (522)
Q Consensus 86 l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~-p~~------~~~e~~~~~W~~~~~al~~ 147 (522)
.++.|+.+.. +....+|.++. ... .+ .++|++.. +.. +..|.....|+++.+..++
T Consensus 150 ~EEtGl~~~~--l~~~~~~~~~~--~~~-~~-~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 212 (271)
T 2a6t_A 150 YEETGFDCSS--RINPNEFIDMT--IRG-QN-VRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTF 212 (271)
T ss_dssp HHHHCCCCTT--TCCTTCEEEEE--ETT-EE-EEEEEECCCCTTCCCC------EEEEEEEEGGGSTTC
T ss_pred HHHhCCCcee--eeeeeeeccCC--cCC-ce-EEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHH
Confidence 9999998776 44444666543 222 23 34455443 321 4568889999999887654
No 123
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=96.52 E-value=0.0015 Score=58.21 Aligned_cols=103 Identities=13% Similarity=0.063 Sum_probs=66.4
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
+++|.+ ++ ++||+||+. ...|.||++.++. ||+ ..+++..++.
T Consensus 10 ~~vi~~--~~-~vLL~~r~~--------------~g~w~lPgG~ve~--gEs------------------~~~aa~REl~ 52 (159)
T 3f6a_A 10 SVFIVC--KD-KVLLHLHKK--------------AKKMLPLGGHIEV--NEL------------------PEEACIREAK 52 (159)
T ss_dssp EEEEEE--TT-EEEEEECSS--------------SCCEECEEEECCT--TCC------------------HHHHHHHHHH
T ss_pred EEEEEE--CC-EEEEEEcCC--------------CCeEECCccCccC--CCC------------------HHHHHHHHHH
Confidence 344544 34 999999874 1389999999986 333 1378999999
Q ss_pred HHcCCeeccCcceee-----------cccccCC-----CCCCCCceeEEEEEeEcCCC----CCCcccccccccHHHHHH
Q 009940 87 EQLGFGVRDGGEWKL-----------WKCVEEP-----EFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 87 ~~~gl~l~~~~l~~~-----------~~w~~~~-----~~~~~~r~dT~ff~a~~p~~----~~~e~~~~~W~~~~~al~ 146 (522)
++.|+.+....+... ..|..|. .+.+...+=+.+|++..+++ +..|..+.+|+++.+..+
T Consensus 53 EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 132 (159)
T 3f6a_A 53 EEAGLNVTLYNPIDINLKKSCDLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKN 132 (159)
T ss_dssp HHHCCCCEECCCCCHHHHHHHHHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTT
T ss_pred HHhCCCceecccccccccccccccccccccCccccccccCCCCceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhh
Confidence 999998766544311 1111110 00122334446788888877 468899999998876543
No 124
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=96.50 E-value=0.0018 Score=59.73 Aligned_cols=104 Identities=10% Similarity=0.020 Sum_probs=67.1
Q ss_pred CceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeecc
Q 009940 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (522)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~ 95 (522)
+.++||+||.+.++.+... .+...|.||++.++. ||. ..+++..|+.++.|+....
T Consensus 45 ~~~vLL~~r~~~~~~g~~~----~~~g~w~lPGG~ve~--gEs------------------~~~aa~REl~EEtGl~~~~ 100 (187)
T 3i9x_A 45 TLHILLIKRSLTNAEGKPN----MEGGKWAVPGGFVDE--NES------------------AEQAAERELEEETSLTDIP 100 (187)
T ss_dssp EEEEEEEECCSBCTTSSBC----TTTTCEECSEEECCT--TSC------------------HHHHHHHHHHHHHCCCSCC
T ss_pred CCEEEEEEEccccccccCC----CCCCEEECCceeCCC--CCC------------------HHHHHHHHHHHHHCCCCcc
Confidence 4599999997754432211 123499999999986 444 1367999999999997644
Q ss_pred CcceeecccccCCCCCCCCceeEEEEEeEcCCC------CCCcccccccccHHHHHH
Q 009940 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG------NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 96 ~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~------~~~e~~~~~W~~~~~al~ 146 (522)
.. .+..+-.+. ..+..++-+.+|.+.+..+ +..|..+..|+++.++.+
T Consensus 101 ~~--~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 154 (187)
T 3i9x_A 101 LI--PFGVFDKPG-RDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALE 154 (187)
T ss_dssp CE--EEEEECCTT-SSTTSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTT
T ss_pred eE--EEEEEcCCc-cCCCCCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHccc
Confidence 33 333333332 1223345556666665544 467888999999988764
No 125
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=96.47 E-value=0.0022 Score=65.74 Aligned_cols=99 Identities=24% Similarity=0.282 Sum_probs=66.5
Q ss_pred CCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeec
Q 009940 15 NDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVR 94 (522)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~ 94 (522)
++.|+||+||+.. +.|.||++.++. ||+ ..+++..|+.|+.|+.+.
T Consensus 36 ~~~~vLLv~r~~~--------------g~W~lPgG~ve~--gEs------------------~~~AA~REl~EEtGl~~~ 81 (364)
T 3fjy_A 36 DSIEVCIVHRPKY--------------DDWSWPKGKLEQ--NET------------------HRHAAVREIGEETGSPVK 81 (364)
T ss_dssp TTEEEEEEEETTT--------------TEEECCEEECCT--TCC------------------HHHHHHHHHHHHHSCCEE
T ss_pred CceEEEEEEcCCC--------------CCEECCcCCCCC--CCC------------------HHHHHHHHHHHHhCCeee
Confidence 4669999999321 489999999986 344 137899999999999986
Q ss_pred cCcceeecccccCCCCCC---------CCceeEEEEEeEcCCC----------------CCCcccccccccHHHHHHHH
Q 009940 95 DGGEWKLWKCVEEPEFGP---------GLTIHTVYIMGKLLDG----------------NQILQEGCKWMSTQSCINCL 148 (522)
Q Consensus 95 ~~~l~~~~~w~~~~~~~~---------~~r~dT~ff~a~~p~~----------------~~~e~~~~~W~~~~~al~~l 148 (522)
...+.....+..+.+ +. .......||++....+ +..|..+..|+++.++.+++
T Consensus 82 ~~~~l~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~ 159 (364)
T 3fjy_A 82 LGPYLCEVEYPLSEE-GKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKIL 159 (364)
T ss_dssp EEEEEEEEC----------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHC
T ss_pred eccccceEEEeccCC-CcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHh
Confidence 655444333333221 11 1257788898887654 34789999999999998864
No 126
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=96.47 E-value=0.00099 Score=62.33 Aligned_cols=97 Identities=16% Similarity=0.121 Sum_probs=64.8
Q ss_pred eeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCc
Q 009940 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~ 97 (522)
++||+||.+++. + ...|.||++.++. ||. ..+++..|+.++.|+....
T Consensus 61 ~vLLvrq~r~~~-~---------~~~welPgG~ve~--gEs------------------~~~aA~REl~EEtGl~~~~-- 108 (198)
T 1vhz_A 61 HLILIREYAVGT-E---------SYELGFSKGLIDP--GES------------------VYEAANRELKEEVGFGAND-- 108 (198)
T ss_dssp EEEEEEEEETTT-T---------EEEEECEEEECCT--TCC------------------HHHHHHHHHHHHHSEEEEE--
T ss_pred EEEEEEcccCCC-C---------CcEEEeCcccCCC--CcC------------------HHHHHHHHHHHHHCCCcCc--
Confidence 999999977653 2 3389999999985 444 1367999999999998753
Q ss_pred ceeecccccCCCCCCCCceeEEEEEeEcCCC-----CCCcccccccccHHHHHHHHH
Q 009940 98 EWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINCLA 149 (522)
Q Consensus 98 l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~-----~~~e~~~~~W~~~~~al~~l~ 149 (522)
+..+......+ +.. .....+|+|....+ +..|..+..|+++.++.+++.
T Consensus 109 ~~~l~~~~~~~--~~~-~~~~~~f~a~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 162 (198)
T 1vhz_A 109 LTFLKKLSMAP--SYF-SSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLE 162 (198)
T ss_dssp EEEEEEEECCT--TTC-CCEEEEEEEEEEEECCCCCCCSSCCCEEEEEGGGGGGGGG
T ss_pred eEEEEEEeCCC--Ccc-CcEEEEEEEEeCCcccCCCCCCceEEEEEEEHHHHHHHHH
Confidence 23333332223 212 23345666654322 667888999999998887654
No 127
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=96.46 E-value=0.0021 Score=62.14 Aligned_cols=98 Identities=16% Similarity=0.126 Sum_probs=69.6
Q ss_pred CceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeecc
Q 009940 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (522)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~ 95 (522)
+.++||+||...|. . ..|.||++.++...+|+ ..+++..++.++.|+.+..
T Consensus 36 ~~~vLLv~R~~~~~--~---------g~W~lPGG~ve~~~gEs------------------~~~AA~REl~EEtGl~~~~ 86 (240)
T 3gz5_A 36 QLKVLLVQRSNHPF--L---------GLWGLPGGFIDETCDES------------------LEQTVLRKLAEKTAVVPPY 86 (240)
T ss_dssp EEEEEEEECCSSSS--T---------TCEECSEEECCTTTCSB------------------HHHHHHHHHHHHHSSCCSE
T ss_pred CcEEEEEECcCCCC--C---------CCEECCccccCCCCCcC------------------HHHHHHHHHHHHHCCCCCc
Confidence 46999999985441 2 38999999998755555 2367999999999997642
Q ss_pred CcceeecccccCCCCCCCCceeEEEEEeEcCCC----CCCcccccccccHHHHH
Q 009940 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSCI 145 (522)
Q Consensus 96 ~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~----~~~e~~~~~W~~~~~al 145 (522)
+..+..+-.+. -.+..++-+.+|.+.++.+ ...|..+..|+++.++.
T Consensus 87 --~~~l~~~~~~~-r~~~~~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~ 137 (240)
T 3gz5_A 87 --IEQLCTVGNNS-RDARGWSVTVCYTALMSYQACQIQIASVSDVKWWPLADVL 137 (240)
T ss_dssp --EEEEEEEEESS-SSTTSCEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHT
T ss_pred --eeeEEEeCCCc-cCCCceEEEEEEEEEecccccCCCCCcccceEEecHHHcc
Confidence 22333333332 1334577888899998877 35788899999988763
No 128
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=96.36 E-value=0.0008 Score=62.35 Aligned_cols=92 Identities=14% Similarity=0.191 Sum_probs=64.7
Q ss_pred eeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCc
Q 009940 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~ 97 (522)
++||+||+. ...|.||+++++..+ . ..+++..++.++.|+.+....
T Consensus 16 ~vLL~~r~~--------------~g~W~lPGG~ve~gE--s------------------~~~aa~REl~EEtGl~~~~~~ 61 (188)
T 3fk9_A 16 QVLLLQKPR--------------RGWWVAPGGKMEAGE--S------------------ILETVKREYWEETGITVKNPE 61 (188)
T ss_dssp EEEEEECTT--------------TCCEECCEEECCTTC--C------------------HHHHHHHHHHHHHSCEESSCE
T ss_pred EEEEEEeCC--------------CCeEECCeecccCCC--C------------------HHHHHHHHHHHHHCCCCCCce
Confidence 999999842 248999999988533 3 136789999999999988766
Q ss_pred ceeecccccCCCCCCC--CceeEEEEEeEcCCC---CCCcccccccccHHHHH
Q 009940 98 EWKLWKCVEEPEFGPG--LTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCI 145 (522)
Q Consensus 98 l~~~~~w~~~~~~~~~--~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al 145 (522)
+.....+..+. +.. .++.+.+|.+...++ ...|.....|+++.+..
T Consensus 62 ~~~~~~~~~~~--~~~~~~~~~~~~f~a~~~~~~~~~~~e~~~~~W~~~~el~ 112 (188)
T 3fk9_A 62 LKGIFSMVIFD--EGKIVSEWMLFTFKATEHEGEMLKQSPEGKLEWKKKDEVL 112 (188)
T ss_dssp EEEEEEEEEEE--TTEEEEEEEEEEEEESCEESCCCSEETTEEEEEEEGGGGG
T ss_pred EEEEEEEEecC--CCcceEEEEEEEEEEECCCCCCcCCCCCEeEEEEEHHHhh
Confidence 65555554433 221 234677888887766 33455689999988754
No 129
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=96.29 E-value=0.0041 Score=63.05 Aligned_cols=98 Identities=14% Similarity=0.090 Sum_probs=66.6
Q ss_pred ceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccC
Q 009940 17 SEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDG 96 (522)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~ 96 (522)
.++||+||+..| +.. .|.||++.++.. |. ..+++..|+.|+.|+.+...
T Consensus 219 ~~vLL~~r~~~~--~~g---------~w~lPgG~ve~g--Et------------------~~~aa~REl~EEtGl~v~~~ 267 (352)
T 2qjt_B 219 DHILMVQRKAHP--GKD---------LWALPGGFLECD--ET------------------IAQAIIRELFEETNINLTHE 267 (352)
T ss_dssp TEEEEEEESSSS--STT---------CEECSEEECCTT--SC------------------HHHHHHHHHHHHHCCSCCHH
T ss_pred CEEEEEEEcCCC--CCC---------eEECCCCcCCCC--CC------------------HHHHHHHHHHHhhCCCcccc
Confidence 499999998754 233 899999999863 33 13679999999999987754
Q ss_pred cce----eecccccCCCCCCCCceeEEEEEeEcCCCC-------CCcccccccccH-HHHHH
Q 009940 97 GEW----KLWKCVEEPEFGPGLTIHTVYIMGKLLDGN-------QILQEGCKWMST-QSCIN 146 (522)
Q Consensus 97 ~l~----~~~~w~~~~~~~~~~r~dT~ff~a~~p~~~-------~~e~~~~~W~~~-~~al~ 146 (522)
.+. ....|..|. .....+.-+..|++.++.++ ..|..+..|+++ .+..+
T Consensus 268 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~ 328 (352)
T 2qjt_B 268 QLAIAKRCEKVFDYPD-RSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKN 328 (352)
T ss_dssp HHHHHEEEEEEECCTT-SCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHH
T ss_pred hhcceeeeeEEecCCC-CCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHh
Confidence 321 223343333 12223456667777776553 578889999999 88766
No 130
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=96.29 E-value=0.0052 Score=61.90 Aligned_cols=98 Identities=16% Similarity=0.058 Sum_probs=63.5
Q ss_pred ceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccC
Q 009940 17 SEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDG 96 (522)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~ 96 (522)
.++||+||+..|. .. .|.||++.++..+ . ..+++..|+.|+.|+.+...
T Consensus 214 ~~vLL~~r~~~~~--~g---------~w~lPgG~ve~gE--~------------------~~~aa~REl~EEtGl~~~~~ 262 (341)
T 2qjo_A 214 GHVLMVRRQAKPG--LG---------LIALPGGFIKQNE--T------------------LVEGMLRELKEETRLKVPLP 262 (341)
T ss_dssp TEEEEEECCSSSS--TT---------CEECSEEECCTTS--C------------------HHHHHHHHHHHHHCCSSCHH
T ss_pred CEEEEEEecCCCC--CC---------eEECCCCcCCCCC--C------------------HHHHHHHHHhhhhCCccccc
Confidence 4999999976542 33 8999999998643 3 13679999999999987754
Q ss_pred cce----eecccccCCCCCCCCceeEEEEEeEcCCC------CCCcccccccccHHHHHH
Q 009940 97 GEW----KLWKCVEEPEFGPGLTIHTVYIMGKLLDG------NQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 97 ~l~----~~~~w~~~~~~~~~~r~dT~ff~a~~p~~------~~~e~~~~~W~~~~~al~ 146 (522)
.+. ....|-.|. ..+..+.-+.+|++.++.+ +..|..+..|+++.+..+
T Consensus 263 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 321 (341)
T 2qjo_A 263 VLRGSIVDSHVFDAPG-RSLRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYA 321 (341)
T ss_dssp HHHHTEEEEEEECCTT-SCTTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHH
T ss_pred cccccccceEEEeCCC-CCCCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhh
Confidence 332 122333333 1222245567888888765 347888999999998876
No 131
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=96.28 E-value=0.0014 Score=59.21 Aligned_cols=108 Identities=13% Similarity=0.253 Sum_probs=68.5
Q ss_pred hhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHH
Q 009940 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (522)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (522)
+++|-+.. + ++||+||+. ...|.||++.++. +|. ..+++..++.
T Consensus 12 ~~~i~~~~-~-~vLl~~r~~--------------~~~w~~p~G~~e~--gE~------------------~~~aa~RE~~ 55 (164)
T 2kdv_A 12 GIVICNRQ-G-QVMWARRFG--------------QHSWQFPQGGINP--GES------------------AEQAMYRELF 55 (164)
T ss_dssp EEEEECTT-S-EEEEEEETT--------------CCCEECCEEECCT--TCC------------------HHHHHHHHHH
T ss_pred EEEEEccC-C-EEEEEEEcC--------------CCeEECCeeecCC--CCC------------------HHHHHHHHHH
Confidence 34555543 4 899999874 2389999999875 333 1378999999
Q ss_pred HHcCCeeccC-cceeecccc---cCCCCC----CCC--ceeEEEEEeEcCCC---------CCCcccccccccHHHHHHH
Q 009940 87 EQLGFGVRDG-GEWKLWKCV---EEPEFG----PGL--TIHTVYIMGKLLDG---------NQILQEGCKWMSTQSCINC 147 (522)
Q Consensus 87 ~~~gl~l~~~-~l~~~~~w~---~~~~~~----~~~--r~dT~ff~a~~p~~---------~~~e~~~~~W~~~~~al~~ 147 (522)
++.|+..... .+..+.+|+ .|.... .+. .....||++.+..+ ...|..+.+|+++.++++.
T Consensus 56 EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 56 EEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp HHHCCCGGGEEEEEECSSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGG
T ss_pred HHHCCCccceEEEEEecceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhh
Confidence 9999987643 233444443 222100 111 12457888887654 1248889999998887765
Q ss_pred HHh
Q 009940 148 LAE 150 (522)
Q Consensus 148 l~~ 150 (522)
+..
T Consensus 136 l~~ 138 (164)
T 2kdv_A 136 VVS 138 (164)
T ss_dssp SCH
T ss_pred hhh
Confidence 433
No 132
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=96.17 E-value=0.0016 Score=61.19 Aligned_cols=92 Identities=18% Similarity=0.293 Sum_probs=62.8
Q ss_pred eeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCc
Q 009940 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~ 97 (522)
++||+|++ .. .|.||++.++.. |. ..+++..++.++.|+.+....
T Consensus 82 ~vLLvrr~------~g---------~w~lPgG~ve~g--Es------------------~~~aa~REl~EEtGl~~~~~~ 126 (206)
T 3o8s_A 82 KILLVQEN------DG---------LWSLPGGWCDVD--QS------------------VKDNVVKEVKEEAGLDVEAQR 126 (206)
T ss_dssp EEEEEECT------TS---------CEECSEEECCTT--SC------------------HHHHHHHHHHHHHCEEEEEEE
T ss_pred EEEEEEec------CC---------eEECCeeccCCC--CC------------------HHHHHHHHHHHHHCCcceeee
Confidence 99999987 23 899999998853 33 137799999999999887655
Q ss_pred ceeecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHH
Q 009940 98 EWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSC 144 (522)
Q Consensus 98 l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~a 144 (522)
+.....+.....-+....+-..||.+.+..+ .+.|.....|+++.+.
T Consensus 127 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el 176 (206)
T 3o8s_A 127 VVAILDKHKNNPAKSAHRVTKVFILCRLLGGEFQPNSETVASGFFSLDDL 176 (206)
T ss_dssp EEEEEEHHHHCC-----CEEEEEEEEEEEEECCCCCSSCSEEEEECTTSC
T ss_pred EEEEEeccccCCCCCCceEEEEEEEEEecCCeecCCCCceEEEEEeHHHh
Confidence 4444333222200223466677888888766 3378999999988664
No 133
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=96.12 E-value=0.0019 Score=60.64 Aligned_cols=93 Identities=17% Similarity=0.309 Sum_probs=63.4
Q ss_pred eeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCc
Q 009940 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~ 97 (522)
++||+|++. ...|.||++.++. ||+ ..+++..++.++.|+.+....
T Consensus 80 ~vLLv~r~~--------------~g~w~lPgG~ve~--gEs------------------~~~aa~REl~EEtGl~v~~~~ 125 (205)
T 3q1p_A 80 KLLFVKEKS--------------DGKWALPGGWADV--GYT------------------PTEVAAKEVFEETGYEVDHFK 125 (205)
T ss_dssp EEEEEEC-----------------CCEECSEEECCT--TCC------------------HHHHHHHHHHHHHSEEEEEEE
T ss_pred EEEEEEEcC--------------CCcEECCcCccCC--CCC------------------HHHHHHHHHHHHHCCccccce
Confidence 999999862 2389999999986 344 137899999999999987655
Q ss_pred ceeecccccCCCCCCCCceeEEEEEeEcCCC---CCCcccccccccHHHH
Q 009940 98 EWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSC 144 (522)
Q Consensus 98 l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~a 144 (522)
+.....+.....-+....+-..||++.+..+ .+.|.....|+++.+.
T Consensus 126 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el 175 (205)
T 3q1p_A 126 LLAIFDKEKHQPSPSATHVYKIFIGCEIIGGEKKTSIETEEVEFFGENEL 175 (205)
T ss_dssp EEEEEEHHHHSCCCCSSCEEEEEEEEEEEEECCCCCTTSCCEEEECTTSC
T ss_pred EEEEEeccccCCCCCCceEEEEEEEEEecCCccCCCCcceEEEEEeHHHh
Confidence 5444333221100223455567888887666 4478999999987764
No 134
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=96.09 E-value=0.0017 Score=62.11 Aligned_cols=94 Identities=14% Similarity=0.139 Sum_probs=64.4
Q ss_pred CceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeecc
Q 009940 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (522)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~ 95 (522)
+.++||+||...|. .+ .|.||++.++. +|+ ..+++..++.++.|+....
T Consensus 27 ~~~vLLv~r~~~~~--~g---------~w~lPGG~ve~--gEs------------------~~~Aa~REl~EEtGl~~~~ 75 (226)
T 2fb1_A 27 EISLLLLKRNFEPA--MG---------EWSLMGGFVQK--DES------------------VDDAAKRVLAELTGLENVY 75 (226)
T ss_dssp EEEEEEEECSSSSS--TT---------CEECEEEECCT--TSC------------------HHHHHHHHHHHHHCCCSCE
T ss_pred CCEEEEEECcCCCC--CC---------CEECCeeccCC--CCC------------------HHHHHHHHHHHHHCCCCCc
Confidence 45999999976431 23 89999999985 444 1367999999999998753
Q ss_pred -CcceeecccccCCCCCCCCceeEEEEEeEcCCCC----CCcccccccccHHHH
Q 009940 96 -GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDGN----QILQEGCKWMSTQSC 144 (522)
Q Consensus 96 -~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~~----~~e~~~~~W~~~~~a 144 (522)
..+..|. .+. -.+..++-+.+|.+.++.+. ..|..++.|+++.+.
T Consensus 76 ~~~l~~~~---~~~-r~~~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el 125 (226)
T 2fb1_A 76 MEQVGAFG---AID-RDPGERVVSIAYYALININEYDRELVQKHNAYWVNINEL 125 (226)
T ss_dssp EEEEEEEC---CTT-SSSSSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSC
T ss_pred eEEEEEeC---CCC-cCCCceEEEEEEEEEecCcccccCCccccceEEEEHHHh
Confidence 2333322 222 12334666778888888763 367889999987754
No 135
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=95.91 E-value=0.0033 Score=55.92 Aligned_cols=96 Identities=22% Similarity=0.241 Sum_probs=59.9
Q ss_pred hhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHH
Q 009940 8 LILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILE 87 (522)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 87 (522)
++|.+ ++ ++||+|++. ...|.||++.++.. |. ..+++..|+.+
T Consensus 6 ~vi~~--~~-~vLL~~r~~--------------~g~W~lPgG~ve~g--Es------------------~~~aa~REl~E 48 (156)
T 1k2e_A 6 GVLVE--NG-KVLLVKHKR--------------LGVYIYPGGHVEHN--ET------------------PIEAVKREFEE 48 (156)
T ss_dssp EECEE--TT-EEEEEECTT--------------TCSEECSEEECCTT--CC------------------HHHHHHHHHHH
T ss_pred EEEEE--CC-EEEEEEEcC--------------CCcEECCeeecCCC--CC------------------HHHHHHHHHHH
Confidence 44444 34 899999863 23899999999863 33 12678999999
Q ss_pred HcCCeeccCccee-eccc---------------ccCCCCCCCCcee-EEEEEeEcCCCCCCcccccccccHHHHHH
Q 009940 88 QLGFGVRDGGEWK-LWKC---------------VEEPEFGPGLTIH-TVYIMGKLLDGNQILQEGCKWMSTQSCIN 146 (522)
Q Consensus 88 ~~gl~l~~~~l~~-~~~w---------------~~~~~~~~~~r~d-T~ff~a~~p~~~~~e~~~~~W~~~~~al~ 146 (522)
+.|+.+....+.. +..| ++-+ . ...+. +.+|.+..++ .|..+..|+++.++.+
T Consensus 49 EtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~f~~~~~~---~e~~~~~W~~~~el~~ 118 (156)
T 1k2e_A 49 ETGIVVEPIGFTYGIIDENAVERPMPLVILEEVVKYP--E-ETHIHFDLIYLVKRVG---GDLKNGEWIDVREIDR 118 (156)
T ss_dssp HHSEEEEECCCCCCCBSSSEEECCCCSEEEEEEEECS--S-CEEEEEEEEEEEEEEE---ECCCSCEEEEGGGGGG
T ss_pred HHCCcceeccceeeecccccccccccceeeeeeecCC--C-CceEEEEEEEEEEecC---CcEeeeEEeCHHHHhc
Confidence 9999987655422 2121 1111 1 11111 2346666544 3578899999887653
No 136
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=95.69 E-value=0.0083 Score=61.65 Aligned_cols=99 Identities=16% Similarity=0.234 Sum_probs=67.6
Q ss_pred ehhhhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHH
Q 009940 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (522)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (522)
.+++|.|.. | ++||.||+.. +...+ +|.||+++++.. . ..++...++
T Consensus 243 ~~~vi~~~~-g-~vLL~rR~~~-g~~~G---------lWefPGG~ve~g---t------------------~~~al~REl 289 (369)
T 3fsp_A 243 AVAVLADDE-G-RVLIRKRDST-GLLAN---------LWEFPSCETDGA---D------------------GKEKLEQMV 289 (369)
T ss_dssp EEEEEECSS-S-EEEEEECCSS-STTTT---------CEECCEEECSSS---C------------------THHHHHHHH
T ss_pred EEEEEEeCC-C-EEEEEECCCC-CCcCC---------cccCCCcccCCC---C------------------cHHHHHHHH
Confidence 456676543 4 8999988753 33444 999999988654 2 024566788
Q ss_pred HHHcCCeeccCc-ceeecccccCCCCCCCCceeEEEEEeEcCCCCCCcccccccccHHHH
Q 009940 86 LEQLGFGVRDGG-EWKLWKCVEEPEFGPGLTIHTVYIMGKLLDGNQILQEGCKWMSTQSC 144 (522)
Q Consensus 86 l~~~gl~l~~~~-l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~~~~e~~~~~W~~~~~a 144 (522)
.++.|+.+.... +..+.|..+ ...++..||.+.+..+ ..|..+..|+++.+.
T Consensus 290 ~EE~Gl~v~~~~~l~~~~h~~~------h~~~~~~~~~~~~~~~-~~e~~~~~Wv~~~el 342 (369)
T 3fsp_A 290 GEQYGLQVELTEPIVSFEHAFS------HLVWQLTVFPGRLVHG-GPVEEPYRLAPEDEL 342 (369)
T ss_dssp TTSSSCCEEECCCCCEEEEECS------SEEEEEEEEEEEECCS-SCCCTTEEEEEGGGG
T ss_pred HHHhCCceeeecccccEEEEcc------eEEEEEEEEEEEEcCC-CCCccccEEeeHHHh
Confidence 888999876554 333344333 2468889999998765 567788999988764
No 137
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=95.59 E-value=0.0062 Score=60.58 Aligned_cols=98 Identities=13% Similarity=0.099 Sum_probs=63.5
Q ss_pred CCCceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCee
Q 009940 14 LNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGV 93 (522)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l 93 (522)
.+.+|+||+|++.. ..|.||++.++.. |. -.+++..|+.|+.|+.+
T Consensus 136 ~~~l~vLl~~r~~~--------------g~W~lPGG~Ve~G--Es------------------~~eAA~REl~EETGl~~ 181 (292)
T 1q33_A 136 KHILQFVAIKRKDC--------------GEWAIPGGMVDPG--EK------------------ISATLKREFGEEALNSL 181 (292)
T ss_dssp SBCEEEEEEECTTT--------------CSEECCCEECCTT--CC------------------HHHHHHHHHHHHHSCGG
T ss_pred CCceEEEEEEecCC--------------CcEeCCCcccCCC--CC------------------HHHHHHHHHHHHhCCcc
Confidence 35689999999752 3899999999853 33 12789999999999985
Q ss_pred cc------------Cccee------ecccccCCCCCCCCceeEEEEEeEcCCC---------CCCcccccccccHHHHH
Q 009940 94 RD------------GGEWK------LWKCVEEPEFGPGLTIHTVYIMGKLLDG---------NQILQEGCKWMSTQSCI 145 (522)
Q Consensus 94 ~~------------~~l~~------~~~w~~~~~~~~~~r~dT~ff~a~~p~~---------~~~e~~~~~W~~~~~al 145 (522)
.. ..+.. |..+...+......++-|..|.+..+.+ .+.|..+..|+++.++.
T Consensus 182 ~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~ 260 (292)
T 1q33_A 182 QKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKL 260 (292)
T ss_dssp GSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTC
T ss_pred ccccccchhhHHHHHHHhhcccceeecccccCCCCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCc
Confidence 22 22221 2223333311112367777777765433 45788999999987753
No 138
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=95.50 E-value=0.0064 Score=59.77 Aligned_cols=89 Identities=12% Similarity=0.054 Sum_probs=62.4
Q ss_pred ceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccC
Q 009940 17 SEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDG 96 (522)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~ 96 (522)
.++||+||+..| .. .|.||++.++.. |. ..+++..|+.|+.|+.+..-
T Consensus 151 ~~vLL~rr~~~~---~g---------~w~lPgG~vE~G--Et------------------~eeAa~REv~EEtGl~v~~~ 198 (269)
T 1vk6_A 151 DSILLAQHTRHR---NG---------VHTVLAGFVEVG--ET------------------LEQAVAREVMEESGIKVKNL 198 (269)
T ss_dssp TEEEEEEETTTC---SS---------CCBCEEEECCTT--CC------------------HHHHHHHHHHHHHCCEEEEE
T ss_pred CEEEEEEecCCC---CC---------cEECCcCcCCCC--CC------------------HHHHHHHHHHHHhCceeeeE
Confidence 499999998765 23 899999999853 33 13679999999999987643
Q ss_pred cceeecccccCCCCCCCCceeEEEEEeEcCCC----CCCcccccccccHHHH
Q 009940 97 GEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSC 144 (522)
Q Consensus 97 ~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~----~~~e~~~~~W~~~~~a 144 (522)
.+..-..|.- + ..-..+|++.+.++ +..|..+..|+++.+.
T Consensus 199 ~~~~~~~~~~------~-~~~~~~f~a~~~~~~~~~~~~E~~~~~W~~~~el 243 (269)
T 1vk6_A 199 RYVTSQPWPF------P-QSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDL 243 (269)
T ss_dssp EEEEEEEEET------T-EEEEEEEEEEEEECCCCCCTTTEEEEEEEETTSC
T ss_pred EEEEEEecCC------C-CEEEEEEEEEECCCCcCCCCcceEEEEEEEHHHh
Confidence 3322222321 1 22456778887666 4678999999998764
No 139
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=95.44 E-value=0.0067 Score=57.38 Aligned_cols=109 Identities=10% Similarity=0.028 Sum_probs=67.2
Q ss_pred ceeEEeecCCCCC--CCccccccccccccCCC-CccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCee
Q 009940 17 SEFLLVKQTPPPK--FNDEEYDSYVDSDLWDL-PAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGV 93 (522)
Q Consensus 17 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l 93 (522)
.++||.||+.++. .-.. .|.+ |+++++..+... |+ .--.+++..|+.++.|+.+
T Consensus 79 grvLl~~R~~~~~e~~~~g---------~w~~gPGGhVE~GEs~~--p~------------EtleeAa~REl~EEtGl~v 135 (211)
T 3e57_A 79 DRVLITKRTTKQSEKRLHN---------LYSLGIGGHVREGDGAT--PR------------EAFLKGLEREVNEEVDVSL 135 (211)
T ss_dssp TEEEEEEC---------------------CBSSEECCCBGGGCSS--HH------------HHHHHHHHHHHHHHEEEEE
T ss_pred CEEEEEEECCCCCcccccC---------CcccccceEEeCCCCCC--ch------------hhHHHHHHHHHHHHhCCee
Confidence 3999999987762 1223 7888 999999877511 10 0113679999999999987
Q ss_pred ccCcceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCcccccccccHHHHHHHHHhc
Q 009940 94 RDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCINCLAEV 151 (522)
Q Consensus 94 ~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~~~~al~~l~~~ 151 (522)
..-.+.-+..|...+ ..+.+=..+|.+...++ ...|.....|+++.+..+...++
T Consensus 136 ~~~~~ig~~~~~~~~---~~~~~l~~~f~~~~~~g~~~~~E~~~~~W~~~~eL~~~~~~l 192 (211)
T 3e57_A 136 RELEFLGLINSSTTE---VSRVHLGALFLGRGKFFSVKEKDLFEWELIKLEELEKFSGVM 192 (211)
T ss_dssp EEEEEEEEEECCSSH---HHHTEEEEEEEEEEEEEEESCTTTCEEEEEEHHHHHHHGGGC
T ss_pred eccEEEEEEeccCCC---CCeEEEEEEEEEEeCCceeCCCCeEEEEEEEHHHHHHhHhhc
Confidence 766555555553322 12222234577777666 55677789999999987754443
No 140
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=94.58 E-value=0.046 Score=49.14 Aligned_cols=79 Identities=18% Similarity=0.162 Sum_probs=51.4
Q ss_pred eeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCc
Q 009940 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (522)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~ 97 (522)
++||+||+ . ..|.||++.++. ||+ ..+++..++.++.|+.+...
T Consensus 28 ~vLL~~r~------~---------g~w~lPgG~ve~--gEs------------------~~~aa~REl~EEtGl~~~~~- 71 (163)
T 3f13_A 28 GVLVTASR------G---------GRYNLPGGKANR--GEL------------------RSQALIREIREETGLRINSM- 71 (163)
T ss_dssp EEEEEECC------------------BBCSEEECCT--TCC------------------HHHHHHHHHHHHHCCCCCEE-
T ss_pred EEEEEEEC------C---------CeEECCceeCCC--CCC------------------HHHHHHHHHHHHHCccccee-
Confidence 89999985 1 289999999985 333 13678999999999986543
Q ss_pred ceeecccccCCCCCCCCceeEEEEEeEcCCC--CCCccccccccc
Q 009940 98 EWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMS 140 (522)
Q Consensus 98 l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--~~~e~~~~~W~~ 140 (522)
..+..+..+. ....+|++..... ...|..+..|++
T Consensus 72 -~~l~~~~~~~-------~~~~~f~~~~~~~~~~~~E~~~~~W~~ 108 (163)
T 3f13_A 72 -LYLFDHITPF-------NAHKVYLCIAQGQPKPQNEIERIALVS 108 (163)
T ss_dssp -EEEEEEECSS-------EEEEEEEEEC-CCCCCCTTCCEEEEES
T ss_pred -EEEEEEecCC-------eEEEEEEEEECCcCccCCCceEEEEEC
Confidence 3333332221 4455666776422 334888999997
No 141
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=93.77 E-value=0.14 Score=49.31 Aligned_cols=117 Identities=9% Similarity=-0.019 Sum_probs=69.7
Q ss_pred hhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCc-cccccccCCCCCCceeeecccccccccc-chhchHHHHH
Q 009940 9 ILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPA-IKLNHIQGEKSEPTISIQGSEKINLGKF-DIESALNQIL 86 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 86 (522)
+|.|+. | ++||.||+..-...+. .|++|. +.+....+|.. +.+.+ -.+++.+++.
T Consensus 76 ~v~~~~-g-~lLLqrRs~~K~~~pG---------~W~~p~gG~v~~G~~E~~------------~Et~~~~~eAA~REl~ 132 (246)
T 2pny_A 76 VLFNTK-N-RILIQQRSDTKVTFPG---------YFTDSCSSHPLYNPAELE------------EKDAIGVRRAAQRRLQ 132 (246)
T ss_dssp EEECTT-C-CEEEEEECTTCSSSTT---------CBCCSEEECCBSSHHHHC------------CGGGHHHHHHHHHHHH
T ss_pred EEEeCC-C-EEEEEEecCCCCCCCC---------ceEeccCceeccCCcccc------------cccchhHHHHHHHHHH
Confidence 455543 5 8898887665434445 899995 77765433220 00000 1478999999
Q ss_pred HHcCCeecc---Ccceeec--ccccCCCCCCC---CceeEEEEEeEcCCC---CCCcccccccccHHHHHHHHHhc
Q 009940 87 EQLGFGVRD---GGEWKLW--KCVEEPEFGPG---LTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINCLAEV 151 (522)
Q Consensus 87 ~~~gl~l~~---~~l~~~~--~w~~~~~~~~~---~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al~~l~~~ 151 (522)
++.|+.... +.+.++. +|..+. ... ..++..| ++..+.. +..|....+|+++++..+++.+.
T Consensus 133 EElGi~~~~v~~~~l~~l~~~~y~~~~--~~~~~~~e~~~vf-~~~~~~~~~~~~~Ev~~~~wv~~eel~~~l~~~ 205 (246)
T 2pny_A 133 AELGIPGEQISPEDIVFMTIYHHKAKS--DRIWGEHEICYLL-LVRKNVTLNPDPSETKSILYLSQEELWELLERE 205 (246)
T ss_dssp HHHCCCTTTCCGGGSEEEEEEEEEEES--SSSBEEEEEEEEE-EEECCCCCCCCTTTEEEEEEECHHHHHHHHHHH
T ss_pred HHHCCCccccCccccEEEEEEEEEecC--CCceeeeEEEEEE-EEEECCCCCCChHHeeEEEEEeHHHHHHHHHhc
Confidence 999998542 2233332 233332 111 2244444 4444322 56899999999999999988763
No 142
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=93.19 E-value=0.05 Score=51.13 Aligned_cols=91 Identities=11% Similarity=-0.031 Sum_probs=60.7
Q ss_pred ceeEEeecCCCCCCCccccccccccccCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccC
Q 009940 17 SEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDG 96 (522)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~ 96 (522)
.++||.||. ...|.||++.++..+. . ..+++..++.++.|+.....
T Consensus 56 ~~vLl~~r~---------------~g~w~~PGG~ve~gE~-t------------------~~~aa~REl~EEtGl~~~~~ 101 (212)
T 1u20_A 56 RVLLMMMRF---------------DGRLGFPGGFVDTRDI-S------------------LEEGLKRELEEELGPALATV 101 (212)
T ss_dssp EEEEEEEET---------------TSCEECSEEEECTTTS-C------------------HHHHHHHHHHHHHCGGGGGC
T ss_pred CEEEEEEeC---------------CCeEECCCcccCCCCC-C------------------HHHHHHHHHHHHHCCCcccc
Confidence 388888871 3489999999986431 2 12679999999999987765
Q ss_pred cce---eecccccCCCCCCCCceeEEEEEeEcCCC--------------CCCcccccccccHHHHH
Q 009940 97 GEW---KLWKCVEEPEFGPGLTIHTVYIMGKLLDG--------------NQILQEGCKWMSTQSCI 145 (522)
Q Consensus 97 ~l~---~~~~w~~~~~~~~~~r~dT~ff~a~~p~~--------------~~~e~~~~~W~~~~~al 145 (522)
.+. .+..... . +. .++-..||++.+..+ ++.|.....|++..+..
T Consensus 102 ~l~~~~~~~~~~~-~-~~--~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~ 163 (212)
T 1u20_A 102 EVTEDDYRSSQVR-E-HP--QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLR 163 (212)
T ss_dssp CCCGGGEEEEEEE-C-TT--SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCT
T ss_pred ceeeeeEEEeccc-c-CC--CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhh
Confidence 431 2222111 1 12 577888999988654 34566778999876543
No 143
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=93.07 E-value=0.18 Score=48.25 Aligned_cols=117 Identities=10% Similarity=0.032 Sum_probs=70.0
Q ss_pred hhcCCCCCceeEEeecCCCCCCCccccccccccccCCCCc-cccccccCCCCCCceeeecccccccccc-chhchHHHHH
Q 009940 9 ILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPA-IKLNHIQGEKSEPTISIQGSEKINLGKF-DIESALNQIL 86 (522)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 86 (522)
+|.|+. | ++||.||+..-..... .|++|. +.+...++|.. +.+.+ -.+++..++.
T Consensus 65 ~v~~~~-g-~lLLq~R~~~k~~~pg---------~W~~p~gG~v~~Ge~E~~------------~E~~~~~~~Aa~REl~ 121 (235)
T 2dho_A 65 FLFNTE-N-KLLLQQRSDAKITFPG---------CFTNTCCSHPLSNPAELE------------ESDALGVRRAAQRRLK 121 (235)
T ss_dssp EEECTT-C-CEEEEEECTTCSSSTT---------CEESSEEECCBSSHHHHC------------CGGGHHHHHHHHHHHH
T ss_pred EEEcCC-C-EEEEEEecCcCCCCCC---------cEEeccCceecCCCcccc------------cccchhHHHHHHHHHH
Confidence 455543 5 8999887665444445 899995 77775533210 00000 1478999999
Q ss_pred HHcCCeecc---Ccceeecc--cccCCCCCCC---CceeEEEEEeEcCCC---CCCcccccccccHHHHHHHHHhc
Q 009940 87 EQLGFGVRD---GGEWKLWK--CVEEPEFGPG---LTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINCLAEV 151 (522)
Q Consensus 87 ~~~gl~l~~---~~l~~~~~--w~~~~~~~~~---~r~dT~ff~a~~p~~---~~~e~~~~~W~~~~~al~~l~~~ 151 (522)
++.|+.... +.+.++.+ |..+. ... ..++..| ++..+.. +..|....+|+++++..+++.+.
T Consensus 122 EElGi~~~~v~~~~l~~l~~~~y~~~~--~~~~~~~e~~~vf-~~~~~~~~~~~~~Ev~~~~wv~~~el~~~l~~~ 194 (235)
T 2dho_A 122 AELGIPLEEVPPEEINYLTRIHYKAQS--DGIWGEHEIDYIL-LVRMNVTLNPDPNEIKSYCYVSKEELKELLKKA 194 (235)
T ss_dssp HHHCCCGGGSCGGGSEEEEEEEEEEEC--SSSBEEEEEEEEE-EEECCCCCCCCTTTEEEEEEECHHHHHHHHHHH
T ss_pred HHHCCCccccChhhcEEEEEEEEeccC--CCccceeEEEEEE-EEEECCCCcCChHHEEEEEEEcHHHHHHHHhhc
Confidence 999998642 22333322 33322 111 1244444 4554322 56899999999999999988764
No 144
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=89.93 E-value=0.29 Score=48.64 Aligned_cols=107 Identities=7% Similarity=-0.048 Sum_probs=70.7
Q ss_pred cCCCCCceeEEeecCCCCCCCccccccccccccCC-CCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHc
Q 009940 11 KNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWD-LPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQL 89 (522)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (522)
+++ ++.++||.||++--+.-++ .|| .+++.+.+ ||. -.++++.|+.++.
T Consensus 128 ~~~-~~~~lll~rRs~~K~~~PG---------~wd~svaG~i~~--GEs------------------~~eaA~REl~EEl 177 (300)
T 3dup_A 128 GAG-ADLHLWIGRRSPDKSVAPG---------KLDNMVAGGQPA--DLS------------------LRQNLIKECAEEA 177 (300)
T ss_dssp SCG-GGCEEEEEEECTTCSSSTT---------CEEESEEEECCT--TSC------------------HHHHHHHHHHHHH
T ss_pred ecC-CeeEEEEEeCCCcccCCCC---------ccccccccCCCC--CCC------------------HHHHHHHHHHHHh
Confidence 444 4679999999887777777 887 77888765 444 1367899999999
Q ss_pred CCeecc-Ccceee--ccc--ccCCCCCCCCceeEEEEEeEcCCC-----CCCcccccccccHHHHHHHHHh
Q 009940 90 GFGVRD-GGEWKL--WKC--VEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINCLAE 150 (522)
Q Consensus 90 gl~l~~-~~l~~~--~~w--~~~~~~~~~~r~dT~ff~a~~p~~-----~~~e~~~~~W~~~~~al~~l~~ 150 (522)
|+.... ..+.+. -+| .++. |-. +---..|.+.+|.+ +..|..+.+|++.+++++++.+
T Consensus 178 GI~~~~~~~l~~~g~i~y~~~~~~--G~~-~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~~ 245 (300)
T 3dup_A 178 DLPEALARQAIPVGAITYCMESPA--GIK-PDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVRT 245 (300)
T ss_dssp CCCHHHHTTCEEEEEEEEEEEETT--EEE-EEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHHH
T ss_pred CCChhhhhhccccceEEEEEecCC--CeE-EEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHhc
Confidence 997542 111111 122 1222 210 10112356777765 6689999999999999999886
No 145
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=89.20 E-value=0.34 Score=45.69 Aligned_cols=80 Identities=10% Similarity=-0.009 Sum_probs=53.7
Q ss_pred cCCCCccccccccCCCCCCceeeeccccccccccchhchHHHHHHHcCCeeccCcceeecccccCCCCCCCCceeEEEEE
Q 009940 43 LWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIM 122 (522)
Q Consensus 43 ~~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~ 122 (522)
.|.||++.++..+. . ..+++..|+.++.|+......+..+..+.+.+ +.....-+.||+
T Consensus 76 ~w~lPGG~ve~gE~-t------------------~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~--~~~~~~~~~~f~ 134 (217)
T 2xsq_A 76 RLGFPGGFVDTQDR-S------------------LEDGLNRELREELGEAAAAFRVERTDYRSSHV--GSGPRVVAHFYA 134 (217)
T ss_dssp CEECSEEECCTTCS-S------------------HHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEE--CSSSSEEEEEEE
T ss_pred eEECCceecCCCCC-C------------------HHHHHHHHHHHHHCCCCccceeEEEEEEeecC--CCCCeEEEEEEE
Confidence 89999999985331 2 13679999999999998765444444444434 322366778889
Q ss_pred eEcCCC--------------CCCcccccccccHHH
Q 009940 123 GKLLDG--------------NQILQEGCKWMSTQS 143 (522)
Q Consensus 123 a~~p~~--------------~~~e~~~~~W~~~~~ 143 (522)
+.++.+ ++.|.....|++..+
T Consensus 135 ~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~ 169 (217)
T 2xsq_A 135 KRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYT 169 (217)
T ss_dssp EECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSB
T ss_pred EEeccccceecccccccccccCCceeeEEEEEHHH
Confidence 887643 235666777776554
No 146
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=84.13 E-value=0.87 Score=35.60 Aligned_cols=46 Identities=22% Similarity=0.196 Sum_probs=34.4
Q ss_pred HHHHHHHHHHc-------CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 408 REAAILQAIEN-------GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 408 r~~~il~~l~~-------g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
|.++|++.+++ ++.|+.||++.+- +-..+++.||..|+++|+|.+.
T Consensus 5 r~~~IL~~I~~~i~~~~g~~psv~EIa~~lg---------vS~~TVrr~L~~Le~kG~I~R~ 57 (77)
T 2jt1_A 5 IVTKIISIVQERQNMDDGAPVKTRDIADAAG---------LSIYQVRLYLEQLHDVGVLEKV 57 (77)
T ss_dssp HHHHHHHHHHHHHHHHTTSCEEHHHHHHHHT---------CCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHHHhhccCCCcCHHHHHHHHC---------CCHHHHHHHHHHHHHCCcEEec
Confidence 44556665542 5669999999852 2346799999999999999887
No 147
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=74.93 E-value=2.1 Score=33.88 Aligned_cols=57 Identities=9% Similarity=-0.060 Sum_probs=41.6
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce-eccchhhhccc
Q 009940 408 REAAILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE-FSILKFRKTCG 473 (522)
Q Consensus 408 r~~~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~-~~~~~~~~~~~ 473 (522)
-..+|++.+++...|+.||...+ ......+..||..|+++|.|.+. ..+-.|+-.|.
T Consensus 18 ~~~~IL~lL~~~g~sa~eLAk~L---------giSk~aVr~~L~~Le~eG~I~~~~~~PP~W~~~~~ 75 (82)
T 1oyi_A 18 IVCEAIKTIGIEGATAAQLTRQL---------NMEKREVNKALYDLQRSAMVYSSDDIPPRWFMTTE 75 (82)
T ss_dssp HHHHHHHHHSSSTEEHHHHHHHS---------SSCHHHHHHHHHHHHHHTSSEECSSSSCEEESCC-
T ss_pred HHHHHHHHHHHcCCCHHHHHHHH---------CcCHHHHHHHHHHHHHCCCEEeCCCCCCcceeccC
Confidence 34567777765557999998884 24557899999999999999887 33466666665
No 148
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=70.46 E-value=6 Score=30.44 Aligned_cols=52 Identities=10% Similarity=0.080 Sum_probs=39.8
Q ss_pred HHHHHHHHHc---CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 409 EAAILQAIEN---GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 409 ~~~il~~l~~---g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
...|++.+.+ ++.|+.||.+.+-...+. ....++..+|+.|++.|.|.+...
T Consensus 19 r~~IL~~l~~~~~~~~s~~el~~~l~~~~~~----is~~TVyR~L~~L~~~Glv~~~~~ 73 (83)
T 2fu4_A 19 RLKILEVLQEPDNHHVSAEDLYKRLIDMGEE----IGLATVYRVLNQFDDAGIVTRHNF 73 (83)
T ss_dssp HHHHHHHHTSGGGSSBCHHHHHHHHHHTTCC----CCHHHHHHHHHHHHHHTSEEEEEC
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHhCCC----CCHhhHHHHHHHHHHCCCeEEEee
Confidence 3568888854 567999999998665442 345688999999999999987643
No 149
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=67.27 E-value=6.1 Score=30.96 Aligned_cols=57 Identities=23% Similarity=0.290 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHc-C---CCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec-cchhhhcc
Q 009940 407 AREAAILQAIEN-G---VETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS-ILKFRKTC 472 (522)
Q Consensus 407 ~r~~~il~~l~~-g---~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~-~~~~~~~~ 472 (522)
+..++|++.+.+ + ..|+.||+..+- ....+|..+|.+|+++|+|.+..+ ...|.-.|
T Consensus 10 ~~~~~IL~~L~~~~pg~~~t~~eLA~~Lg---------vsr~tV~~~L~~Le~~G~I~~~g~~~~~W~i~~ 71 (81)
T 1qbj_A 10 DQEQRILKFLEELGEGKATTAHDLSGKLG---------TPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAV 71 (81)
T ss_dssp HHHHHHHHHHHHHCTTCCBCHHHHHHHHT---------CCHHHHHHHHHHHHHTTSEEEESSSSCEEEEC-
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCEEecCCCCCeeEEeC
Confidence 345567777754 4 469999999853 345689999999999999987632 24554443
No 150
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=65.96 E-value=9.2 Score=29.86 Aligned_cols=47 Identities=6% Similarity=0.090 Sum_probs=35.8
Q ss_pred HHHHHHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHH-HHHHHHHHHHHCCCccce
Q 009940 407 AREAAILQAIE-NGVETLFDIVANVYSEVPRSFWIPAAS-NVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 407 ~r~~~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~-~v~ahL~~L~~~g~i~~~ 462 (522)
+..++|+..+. .|+.|+.+|.+.+ ..... .++.||..|+++|.|.+.
T Consensus 11 ~~~~~IL~~Lk~~g~~ta~eiA~~L---------git~~~aVr~hL~~Le~eGlV~~~ 59 (79)
T 1xmk_A 11 EIKEKICDYLFNVSDSSALNLAKNI---------GLTKARDINAVLIDMERQGDVYRQ 59 (79)
T ss_dssp HHHHHHHHHHHHTCCEEHHHHHHHH---------CGGGHHHHHHHHHHHHHTTSEEEE
T ss_pred hHHHHHHHHHHHcCCcCHHHHHHHc---------CCCcHHHHHHHHHHHHHCCCEEec
Confidence 34456777775 5788999999884 24445 789999999999999754
No 151
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=65.18 E-value=20 Score=28.48 Aligned_cols=44 Identities=5% Similarity=0.134 Sum_probs=35.0
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
+|+..+.+|+.|+.||.+.+ +++. .++..||..|++.|.|.+..
T Consensus 27 ~Il~~L~~~~~~~~ela~~l--~is~-------~tvs~~L~~L~~~Glv~~~~ 70 (102)
T 3pqk_A 27 MLVCTLVEGEFSVGELEQQI--GIGQ-------PTLSQQLGVLRESGIVETRR 70 (102)
T ss_dssp HHHHHHHTCCBCHHHHHHHH--TCCT-------THHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHhCCCCHHHHHHHH--CcCH-------HHHHHHHHHHHHCCCeEEEE
Confidence 57777778888999999887 3332 36788999999999997763
No 152
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=63.51 E-value=6.6 Score=30.56 Aligned_cols=45 Identities=9% Similarity=0.072 Sum_probs=35.5
Q ss_pred HHHHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 409 EAAILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 409 ~~~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
+.+|++.++ +|..++.||++.+ ..-..+|+.-|++|+++|+|.+.
T Consensus 4 L~~Il~~L~~~g~vsv~eLa~~l---------~VS~~TIRrdL~~Le~~G~l~R~ 49 (78)
T 1xn7_A 4 LIQVRDLLALRGRMEAAQISQTL---------NTPQPMINAMLQQLESMGKAVRI 49 (78)
T ss_dssp HHHHHHHHHHSCSBCHHHHHHHT---------TCCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHcCCCcHHHHHHHH---------CcCHHHHHHHHHHHHHCCCEEEe
Confidence 356777775 4677999999884 24457899999999999999876
No 153
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=58.83 E-value=6.6 Score=31.28 Aligned_cols=45 Identities=7% Similarity=0.095 Sum_probs=35.6
Q ss_pred HHHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 410 AAILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 410 ~~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
++|++.++ +|..++.||++.+ ..-..+|+.-|+.|+++|+|.+..
T Consensus 5 ~~Il~~L~~~g~vsv~eLA~~l---------~VS~~TIRrDL~~Le~~G~l~R~~ 50 (87)
T 2k02_A 5 MEVRDMLALQGRMEAKQLSARL---------QTPQPLIDAMLERMEAMGKVVRIS 50 (87)
T ss_dssp HHHHHHHHHSCSEEHHHHHHHT---------TCCHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHcCCCcHHHHHHHH---------CcCHHHHHHHHHHHHHCCCEEEEe
Confidence 46777775 4667999998884 244578999999999999998874
No 154
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=58.46 E-value=8.6 Score=30.49 Aligned_cols=45 Identities=16% Similarity=0.188 Sum_probs=35.2
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
+|+..+.+|+.|..||++.+ + ....++..||..|++.|.|.+...
T Consensus 27 ~Il~~L~~~~~~~~ela~~l--~-------is~~tvs~~L~~L~~~Glv~~~~~ 71 (98)
T 3jth_A 27 QILCMLHNQELSVGELCAKL--Q-------LSQSALSQHLAWLRRDGLVTTRKE 71 (98)
T ss_dssp HHHHHTTTSCEEHHHHHHHH--T-------CCHHHHHHHHHHHHHTTSEEEECC
T ss_pred HHHHHHhcCCCCHHHHHHHH--C-------cCHHHHHHHHHHHHHCCCeEEEEe
Confidence 57777777778999998886 2 334678899999999999987643
No 155
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=55.94 E-value=8.9 Score=29.56 Aligned_cols=47 Identities=28% Similarity=0.367 Sum_probs=35.9
Q ss_pred HHHHHHHHHHc-C---CCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 408 REAAILQAIEN-G---VETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 408 r~~~il~~l~~-g---~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
...+|++.+.+ + ..|+.||++.+- ....+|..||..|+++|+|....
T Consensus 15 ~~~~IL~~L~~~~~~~~~t~~eLA~~Lg---------vs~~tV~~~L~~L~~~G~I~~~g 65 (77)
T 1qgp_A 15 QEQRILKFLEELGEGKATTAHDLSGKLG---------TPKKEINRVLYSLAKKGKLQKEA 65 (77)
T ss_dssp HHHHHHHHHHHHCSSSCEEHHHHHHHHC---------CCHHHHHHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCEEecC
Confidence 34567777754 4 469999999864 33468999999999999997763
No 156
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=54.99 E-value=12 Score=27.83 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=33.4
Q ss_pred HHHHHHHHHc--CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccc
Q 009940 409 EAAILQAIEN--GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPK 461 (522)
Q Consensus 409 ~~~il~~l~~--g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~ 461 (522)
..+|++.+.+ ++.+..||++.+ .+...++..++..|+++|.|..
T Consensus 12 ~~~IL~~L~~~~~~~s~~eLA~~l---------glsr~tv~~~l~~L~~~G~I~~ 57 (67)
T 2heo_A 12 EQKILQVLSDDGGPVAIFQLVKKC---------QVPKKTLNQVLYRLKKEDRVSS 57 (67)
T ss_dssp HHHHHHHHHHHCSCEEHHHHHHHH---------CSCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHcCCCcCHHHHHHHH---------CcCHHHHHHHHHHHHHCCcEec
Confidence 3457777754 467999999884 2346788899999999999865
No 157
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=52.35 E-value=19 Score=28.42 Aligned_cols=44 Identities=11% Similarity=0.107 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 410 AAILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 410 ~~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
.+|+..+ +++.|..||++.+ .....++..||..|++.|.|.+..
T Consensus 34 ~~Il~~L-~~~~~~~eLa~~l---------~is~~tv~~~L~~L~~~Glv~~~~ 77 (96)
T 1y0u_A 34 RKILRML-DKGRSEEEIMQTL---------SLSKKQLDYHLKVLEAGFCIERVG 77 (96)
T ss_dssp HHHHHHH-HTTCCHHHHHHHH---------TCCHHHHHHHHHHHHHTTSEEEET
T ss_pred HHHHHHH-cCCCCHHHHHHHH---------CcCHHHHHHHHHHHHHCCCEEEEC
Confidence 3577777 7788999998875 234567899999999999998764
No 158
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=52.16 E-value=14 Score=28.27 Aligned_cols=51 Identities=6% Similarity=0.047 Sum_probs=37.2
Q ss_pred HHHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceecc
Q 009940 410 AAILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFSI 465 (522)
Q Consensus 410 ~~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~~ 465 (522)
..|+..+. .++.|..||...+-.+. .+...++..+|+.|++.|.|.+....
T Consensus 12 ~~vL~~L~~~~~~t~~ei~~~l~~~~-----~~s~~Tv~~~l~rL~~kGlv~r~~~g 63 (82)
T 1p6r_A 12 LEVMKVIWKHSSINTNEVIKELSKTS-----TWSPKTIQTMLLRLIKKGALNHHKEG 63 (82)
T ss_dssp HHHHHHHHTSSSEEHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHTTSEEEEEET
T ss_pred HHHHHHHHcCCCCCHHHHHHHHhhcC-----CccHHHHHHHHHHHHHCCCeEEEecC
Confidence 45666664 45679999999875321 13457889999999999999887543
No 159
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=50.42 E-value=19 Score=29.29 Aligned_cols=44 Identities=11% Similarity=0.105 Sum_probs=33.8
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
+|+..+.+++.|..||++.+ .....++..||..|++.|.|.+..
T Consensus 29 ~IL~~L~~~~~s~~eLa~~l---------gis~stvs~~L~~L~~~GlV~~~~ 72 (108)
T 2kko_A 29 QILDLLAQGERAVEAIATAT---------GMNLTTASANLQALKSGGLVEARR 72 (108)
T ss_dssp HHHHHHTTCCEEHHHHHHHH---------TCCHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHcCCcCHHHHHHHH---------CcCHHHHHHHHHHHHHCCCeEEEE
Confidence 46666766777888888775 134567889999999999998764
No 160
>2vxz_A Pyrsv_GP04; viral protein, SSPF, ORF165A; 1.7A {Pyrobaculum spherical virus}
Probab=49.59 E-value=20 Score=31.44 Aligned_cols=50 Identities=14% Similarity=0.140 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 404 NRRAREAAILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 404 ~~~~r~~~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
...+|.++|++.+.+|+.|..+|+..+= +--+.+.-||-.|+++|.|...
T Consensus 8 ~v~erk~~ILE~Lk~G~~~t~~Iak~LG---------lShg~aq~~Ly~LeREG~V~~V 57 (165)
T 2vxz_A 8 EVLVRLRDILALLADGCKTTSLIQQRLG---------LSHGRAKALIYVLEKEGRVTRV 57 (165)
T ss_dssp HHHHHHHHHHHHHTTCCEEHHHHHHHHT---------CCHHHHHHHHHHHHHTTSCEEE
T ss_pred HHHHHHHHHHHHHHhCCccHHHHHHHhC---------CcHHHHHHHHHHHHhcCceEEE
Confidence 3467788899999999999999999852 2234455678899999999766
No 161
>2k4b_A Transcriptional regulator; DNA binding protein, winged helix; NMR {Lactococcus lactis subsp}
Probab=49.16 E-value=9.9 Score=30.90 Aligned_cols=53 Identities=21% Similarity=0.208 Sum_probs=37.4
Q ss_pred HHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceeccchh
Q 009940 411 AILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFSILKF 468 (522)
Q Consensus 411 ~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~~~~~ 468 (522)
.|+..+. .++.|+.||.+.+..+. .+...++...|++|++.|.|.+..+...+
T Consensus 39 ~VL~~L~~~~~~t~~eL~~~l~~~~-----~~s~sTVt~~L~rLe~KGlV~R~~~gR~~ 92 (99)
T 2k4b_A 39 IVMRVIWSLGEARVDEIYAQIPQEL-----EWSLATVKTLLGRLVKKEMLSTEKEGRKF 92 (99)
T ss_dssp HHHHHHHHHSCEEHHHHHHTCCGGG-----CCCHHHHHHHHHHHHHTTSCEEEEETTEE
T ss_pred HHHHHHHhCCCCCHHHHHHHHhccc-----CCCHhhHHHHHHHHHHCCCEEEEeCCCEE
Confidence 3445442 46779999999875431 23457888999999999999987544333
No 162
>3f6o_A Probable transcriptional regulator, ARSR family protein; transcriptional regulator,RHA00566,MCSG, structural genomics, PSI-2; 1.90A {Rhodococcus SP}
Probab=47.87 E-value=14 Score=30.50 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=35.4
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
+|+..+.+|+.|+.||++.+ .....++..||..|++.|.|.....
T Consensus 22 ~Il~~L~~~~~~~~eLa~~l---------~is~~tvs~hL~~L~~~GlV~~~~~ 66 (118)
T 3f6o_A 22 AVLGRLSRGPATVSELAKPF---------DMALPSFMKHIHFLEDSGWIRTHKQ 66 (118)
T ss_dssp HHHHHHHTCCEEHHHHHTTC---------CSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHhCCCCHHHHHHHh---------CcCHHHHHHHHHHHHHCCCeEEEec
Confidence 57777778888999888764 2345678899999999999987643
No 163
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=47.10 E-value=28 Score=27.94 Aligned_cols=46 Identities=9% Similarity=0.073 Sum_probs=36.5
Q ss_pred HHHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 410 AAILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 410 ~~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
.+|+..+.+++.|..||.+.+ .....++..||..|++.|.|.+...
T Consensus 24 ~~IL~~L~~~~~~~~ela~~l---------~is~~tv~~~l~~L~~~gli~~~~~ 69 (114)
T 2oqg_A 24 WEILTELGRADQSASSLATRL---------PVSRQAIAKHLNALQACGLVESVKV 69 (114)
T ss_dssp HHHHHHHHHSCBCHHHHHHHS---------SSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHcCCCCHHHHHHHH---------CcCHHHHHHHHHHHHHCCCeeEEec
Confidence 357777777888999999875 2455788999999999999987643
No 164
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=46.33 E-value=20 Score=27.34 Aligned_cols=43 Identities=12% Similarity=0.128 Sum_probs=32.9
Q ss_pred HHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 411 AILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 411 ~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
+|++.+. .++.|..||++.+ .....++..+|+.|+++|.|...
T Consensus 4 ~Il~~L~~~~~~s~~eLa~~l---------gvs~~tv~r~L~~L~~~GlI~~~ 47 (81)
T 2htj_A 4 EILEFLNRHNGGKTAEIAEAL---------AVTDYQARYYLLLLEKAGMVQRS 47 (81)
T ss_dssp HHHHHHHHSCCCCHHHHHHHH---------TSCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHcCCCCHHHHHHHH---------CcCHHHHHHHHHHHHHCCCEEEe
Confidence 4666664 3677999999885 23456789999999999999743
No 165
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=44.67 E-value=15 Score=30.54 Aligned_cols=46 Identities=22% Similarity=0.184 Sum_probs=35.5
Q ss_pred HHHHHHHHc-CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 410 AAILQAIEN-GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 410 ~~il~~l~~-g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
.+|++.+.+ |+.|+.+|...+.- .+....+..||..|++.|.|...
T Consensus 16 ~~IL~~L~~~g~~s~~eLA~~l~~-------giS~~aVs~rL~~Le~~GLV~~~ 62 (111)
T 3b73_A 16 DRILEIIHEEGNGSPKELEDRDEI-------RISKSSVSRRLKKLADHDLLQPL 62 (111)
T ss_dssp HHHHHHHHHHSCBCHHHHHTSTTC-------CSCHHHHHHHHHHHHHTTSEEEC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHhc-------CCCHHHHHHHHHHHHHCCCEEec
Confidence 468888864 88999999986421 13456788999999999999875
No 166
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=44.53 E-value=32 Score=27.63 Aligned_cols=44 Identities=14% Similarity=0.122 Sum_probs=35.0
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
+|+..+.+++.|+.||+..+- ....++..||..|++.|.|....
T Consensus 30 ~IL~~L~~~~~~~~ela~~l~---------is~stvs~~L~~L~~~Glv~~~~ 73 (106)
T 1r1u_A 30 RIMELLSVSEASVGHISHQLN---------LSQSNVSHQLKLLKSVHLVKAKR 73 (106)
T ss_dssp HHHHHHHHCCBCHHHHHHHHT---------CCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhCCCCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCeEEEE
Confidence 577777777789999988852 34567889999999999998764
No 167
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=44.42 E-value=22 Score=30.21 Aligned_cols=48 Identities=10% Similarity=0.096 Sum_probs=37.6
Q ss_pred HHHHHHHc---CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 411 AILQAIEN---GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 411 ~il~~l~~---g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
.|++.+.+ ++.|++||.+.+-...+. ....+|..+|+.|.+.|.|.+.
T Consensus 22 ~Il~~L~~~~~~~~sa~ei~~~l~~~~~~----is~aTVYR~L~~L~e~Glv~~~ 72 (136)
T 1mzb_A 22 KILQMLDSAEQRHMSAEDVYKALMEAGED----VGLATVYRVLTQFEAAGLVVRH 72 (136)
T ss_dssp HHHHHHHCC-CCSBCHHHHHHHHHHTTCC----CCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHhhCCC----CCHHHHHHHHHHHHHCCcEEEE
Confidence 47777754 467999999998766553 3456888999999999999876
No 168
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=43.56 E-value=24 Score=34.92 Aligned_cols=55 Identities=18% Similarity=0.237 Sum_probs=39.5
Q ss_pred hchHHHHHHHc-CCeeccCcceeecccccCCCCCCCCceeEEEEEeEcCCCCCCcccccccccHHH
Q 009940 79 ESALNQILEQL-GFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDGNQILQEGCKWMSTQS 143 (522)
Q Consensus 79 ~~~~~~~l~~~-gl~l~~~~l~~~~~w~~~~~~~~~~r~dT~ff~a~~p~~~~~e~~~~~W~~~~~ 143 (522)
..++.|++++. |+.+....|.-. |=.+. +..-+.||.+++..|. +.+..|.++.+
T Consensus 217 ~~a~RE~~EEttGl~v~~~~L~~v--~~~~~-----~~~~~i~f~~~~~~g~---~~e~~~f~~~e 272 (321)
T 3rh7_A 217 ARTLAAYLEQLTGLNVTIGFLYSV--YEDKS-----DGRQNIVYHALASDGA---PRQGRFLRPAE 272 (321)
T ss_dssp HHHHHHHHHHHHSSCEEEEEEEEE--EECTT-----TCCEEEEEEEEECSSC---CSSSEEECHHH
T ss_pred HHHHHHHHHHhcCCEEeeceEEEE--EEcCC-----CceEEEEEEEEeCCCC---eeeeEEECHHH
Confidence 47999999998 999987766543 32222 2344679999998664 57789997765
No 169
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=41.17 E-value=37 Score=28.60 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=36.9
Q ss_pred HHHHHHHc--CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 411 AILQAIEN--GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 411 ~il~~l~~--g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
.|++.+.+ ++.|++||.+.+-+..+. ....+|...|+.|.+.|.|.+.
T Consensus 15 ~Il~~l~~~~~~~sa~ei~~~l~~~~~~----is~~TVYR~L~~L~e~Glv~~~ 64 (131)
T 2o03_A 15 AISTLLETLDDFRSAQELHDELRRRGEN----IGLTTVYRTLQSMASSGLVDTL 64 (131)
T ss_dssp HHHHHHHHCCSCEEHHHHHHHHHHTTCC----CCHHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHhCCC----CCHhhHHHHHHHHHHCCCEEEE
Confidence 46666653 456999999998766553 3456888999999999999876
No 170
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=40.19 E-value=35 Score=29.31 Aligned_cols=49 Identities=18% Similarity=0.170 Sum_probs=37.6
Q ss_pred HHHHHHHc--CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIEN--GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~--g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
.|++.+.+ ++.|++||.+.+-...+. ....+|..+|+.|.+.|.|.+..
T Consensus 26 ~Il~~L~~~~~~~sa~ei~~~l~~~~~~----is~aTVYR~L~~L~e~Glv~~~~ 76 (145)
T 2fe3_A 26 AILEYLVNSMAHPTADDIYKALEGKFPN----MSVATVYNNLRVFRESGLVKELT 76 (145)
T ss_dssp HHHHHHHHCSSCCCHHHHHHHHGGGCTT----CCHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHhCCC----CChhhHHHHHHHHHHCCCEEEEe
Confidence 46776643 467999999998766553 34568889999999999998763
No 171
>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A
Probab=39.43 E-value=40 Score=28.01 Aligned_cols=44 Identities=11% Similarity=0.083 Sum_probs=35.1
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
+|+..+.+++.+..|+.+.+- ....++..||..|++.|.+....
T Consensus 50 ~IL~~L~~~~~s~~ela~~lg---------is~stvs~~L~~Le~~Glv~~~~ 93 (122)
T 1r1t_A 50 RLLSLLARSELCVGDLAQAIG---------VSESAVSHQLRSLRNLRLVSYRK 93 (122)
T ss_dssp HHHHHHTTCCBCHHHHHHHHT---------CCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHcCCCCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCeEEEE
Confidence 577777777789999988852 34567889999999999998764
No 172
>3hhh_A Transcriptional regulator, PADR family; PF03551, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.70A {Enterococcus faecalis} SCOP: a.4.5.0
Probab=38.93 E-value=31 Score=28.65 Aligned_cols=50 Identities=14% Similarity=0.070 Sum_probs=39.5
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
-|+..+.+++.+-.||.+.+-. ...+.....++..+|.+|+++|.|....
T Consensus 17 ~IL~lL~~~p~~Gyei~~~l~~---~g~~~is~gtlY~~L~rLe~~GlI~~~~ 66 (116)
T 3hhh_A 17 LVLAIIQRKETYGYEITKILND---QGFTEIVEGTVYTILLRLEKNQWVIAEK 66 (116)
T ss_dssp HHHHHHHHSCBCHHHHHHHHHT---TSCSSCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHhcCCCCHHHHHHHHHH---cCCCCCCccHHHHHHHHHHHCCCEEEEe
Confidence 4788888889999999998865 1233455678889999999999998874
No 173
>2jsc_A Transcriptional regulator RV1994C/MT2050; cadmium, transcriptional repressor, solution structure, STRU genomics; NMR {Mycobacterium tuberculosis}
Probab=38.65 E-value=22 Score=29.35 Aligned_cols=45 Identities=24% Similarity=0.208 Sum_probs=34.5
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
+|+..+.+++.+..||.+.+ .....++..||..|++.|.|.....
T Consensus 25 ~IL~~L~~~~~~~~eLa~~l---------gis~stvs~~L~~L~~~GlV~~~~~ 69 (118)
T 2jsc_A 25 RILVALLDGVCYPGQLAAHL---------GLTRSNVSNHLSCLRGCGLVVATYE 69 (118)
T ss_dssp HHHHHHHTTCCSTTTHHHHH---------SSCHHHHHHHHHHHTTTTSEEEEEC
T ss_pred HHHHHHHcCCCCHHHHHHHH---------CcCHHHHHHHHHHHHHCCceEEEEE
Confidence 57777777777888888774 2345678899999999999987643
No 174
>3f6v_A Possible transcriptional regulator, ARSR family protein; probable transcriptional repressor ARSR family, structural genomics, PSI-2; 1.48A {Rhodococcus SP}
Probab=37.70 E-value=25 Score=30.69 Aligned_cols=44 Identities=16% Similarity=0.276 Sum_probs=35.2
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
+|+..+.+++.|+.||+..+ .+...++..||..|++.|.|....
T Consensus 62 ~IL~~L~~~~~t~~eLa~~l---------gls~stvs~hL~~L~~aGlV~~~~ 105 (151)
T 3f6v_A 62 RLVQLLTSGEQTVNNLAAHF---------PASRSAISQHLRVLTEAGLVTPRK 105 (151)
T ss_dssp HHHHHGGGCCEEHHHHHTTS---------SSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhCCCCHHHHHHHH---------CcCHHHHHHHHHHHHHCCCEEEEe
Confidence 47777777888999988764 244678999999999999998763
No 175
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=37.48 E-value=29 Score=29.65 Aligned_cols=50 Identities=14% Similarity=0.102 Sum_probs=38.2
Q ss_pred HHHHHHHHc--CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 410 AAILQAIEN--GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 410 ~~il~~l~~--g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
..|++.+.+ ++.|++||.+.+-...+. +...+|...|+.|.+.|.|.+..
T Consensus 17 ~~Il~~L~~~~~h~sa~eI~~~l~~~~~~----is~aTVYR~L~~L~e~Glv~~~~ 68 (139)
T 3mwm_A 17 AAVSAALQEVEEFRSAQELHDMLKHKGDA----VGLTTVYRTLQSLADAGEVDVLR 68 (139)
T ss_dssp HHHHHHHTTCSSCEEHHHHHHHHHHTTCC----CCHHHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHHHCCCEEEEE
Confidence 347777754 456999999998766553 34568888999999999997763
No 176
>1uly_A Hypothetical protein PH1932; helix-turn-helix, structural genomics, DNA binding protein; 2.50A {Pyrococcus horikoshii} SCOP: a.4.5.58 PDB: 2cwe_A
Probab=36.95 E-value=37 Score=30.83 Aligned_cols=46 Identities=13% Similarity=0.203 Sum_probs=37.5
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 408 REAAILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 408 r~~~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
+..+|+..+.+++.|..||.+.+- +...++..|+..|++.|.|.+.
T Consensus 21 ~~~~IL~~L~~~~~s~~eLA~~lg---------lS~stv~~~l~~Le~~GlI~~~ 66 (192)
T 1uly_A 21 TRRKILKLLRNKEMTISQLSEILG---------KTPQTIYHHIEKLKEAGLVEVK 66 (192)
T ss_dssp HHHHHHHHHTTCCBCHHHHHHHHT---------CCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCEEEE
Confidence 344688888878889999998852 4557889999999999999876
No 177
>4esb_A Transcriptional regulator, PADR family; DNA binding protein, HTH fold; 2.50A {Bacillus cereus}
Probab=36.63 E-value=27 Score=28.93 Aligned_cols=50 Identities=8% Similarity=0.116 Sum_probs=39.4
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
-|+..+.+++.+..||.+.+-. . ..+.....++..+|.+|+++|.|....
T Consensus 13 ~IL~~L~~~~~~Gyei~~~l~~-~--~~~~is~gtlY~~L~rLe~~GlI~~~~ 62 (115)
T 4esb_A 13 CILYIISQEEVYGYELSTKLNK-H--GFTFVSEGSIYPLLLRMQKEKLIEGTL 62 (115)
T ss_dssp HHHHHHHHSCEEHHHHHHHHHH-T--TCTTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHcCCCCHHHHHHHHHH-c--CCCCCCcChHHHHHHHHHHCCCeEEEe
Confidence 4777787888899999998865 1 234456678889999999999998864
No 178
>3f8b_A Transcriptional regulator, PADR-like family; winged helix turn helix, transcription regulator; 2.00A {Lactococcus lactis subsp} SCOP: a.4.5.0 PDB: 3f8c_A* 3f8f_A*
Probab=36.07 E-value=29 Score=28.65 Aligned_cols=52 Identities=10% Similarity=0.157 Sum_probs=39.7
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
-|+..+.+++.+..||.+.+-..... .+.....++..+|.+|+++|.|....
T Consensus 16 ~IL~~L~~~~~~Gyei~~~l~~~~~~-~~~i~~gtly~~L~rLe~~GlI~~~~ 67 (116)
T 3f8b_A 16 ILLNVLKQGDNYVYGIIKQVKEASNG-EMELNEATLYTIFKRLEKDGIISSYW 67 (116)
T ss_dssp HHHHHHHHCCBCHHHHHHHHHHHTTT-CCCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHhCC-CCCCCcchHHHHHHHHHHCCCEEEEe
Confidence 47888888899999999987543222 12345678889999999999998874
No 179
>3g2b_A Coenzyme PQQ synthesis protein D; helix-turn-helix, PQQ biosynthesis, biosynthetic protein; 1.66A {Xanthomonas campestris PV}
Probab=35.90 E-value=52 Score=26.32 Aligned_cols=64 Identities=17% Similarity=0.152 Sum_probs=44.9
Q ss_pred EEEcCCCCCcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcc
Q 009940 382 ALIPMHGRVNLWPKHMLCGYLKNRRAREAAILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLP 460 (522)
Q Consensus 382 ~ivPgHG~~~~~~~~~i~~~l~~~~~r~~~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~ 460 (522)
++++..|...-+. --..|++.+. |..|+.+|++.+-..++... -.....+...|+.|.++|.|+
T Consensus 31 VlL~peg~i~Ln~-------------~a~~Iw~l~D-G~rtv~eIv~~L~~~y~~~~-e~i~~DV~~FL~~L~~~g~I~ 94 (95)
T 3g2b_A 31 VLLAPERVVELDD-------------IALVVAQRYD-GTQSLAQIAQTLAAEFDADA-SEIETDVIELTTTLHQKRLLR 94 (95)
T ss_dssp EEECCCCCCCCCT-------------HHHHHHHHCC-SSSCHHHHHHHHHHHTTCCH-HHHHHHHHHHHHHHHHTTCCC
T ss_pred EEECCCceeecCH-------------HHHHHHHHcc-CCCCHHHHHHHHHHHcCCcH-HHHHHHHHHHHHHHHHCcCEe
Confidence 4666666554332 2335777664 67899999999977776432 234567899999999999875
No 180
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=35.58 E-value=30 Score=29.99 Aligned_cols=48 Identities=8% Similarity=0.113 Sum_probs=37.5
Q ss_pred HHHHHHHc---CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 411 AILQAIEN---GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 411 ~il~~l~~---g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
.|++.+.+ ++.|++||.+.+-...+. ....+|..+|+.|.+.|.|.+.
T Consensus 21 ~Il~~L~~~~~~h~sa~ei~~~l~~~~~~----is~aTVYR~L~~L~e~Glv~~~ 71 (150)
T 2w57_A 21 KILEVLQQPECQHISAEELYKKLIDLGEE----IGLATVYRVLNQFDDAGIVTRH 71 (150)
T ss_dssp HHHHHHTSGGGSSEEHHHHHHHHHHTTCC----CCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHHHCCcEEEE
Confidence 47777743 467999999998766553 3456888999999999999876
No 181
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=35.48 E-value=34 Score=27.56 Aligned_cols=46 Identities=9% Similarity=0.083 Sum_probs=35.2
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
.|+..+.+|+.+..||.+.+- .....++..+|+.|++.|.|.+...
T Consensus 18 ~IL~~L~~~~~~~~eLa~~l~--------~is~~tls~~L~~Le~~GlI~r~~~ 63 (107)
T 2hzt_A 18 VILXHLTHGKKRTSELKRLMP--------NITQKMLTQQLRELEADGVINRIVY 63 (107)
T ss_dssp HHHHHHTTCCBCHHHHHHHCT--------TSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHhCCCCHHHHHHHhc--------CCCHHHHHHHHHHHHHCCCEEEeec
Confidence 466666677889999988741 2445678899999999999988744
No 182
>1yg2_A Gene activator APHA; virulence factor, winged helix, transcripti factor, transcription; 2.20A {Vibrio cholerae} SCOP: a.4.5.61
Probab=35.47 E-value=25 Score=31.39 Aligned_cols=52 Identities=17% Similarity=0.325 Sum_probs=39.8
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
.|+..+.+++.+..||.+.+-.... ..|.....++..+|.+|+++|.|....
T Consensus 6 ~iL~lL~~~~~~gyel~~~l~~~~~-~~~~~s~~~ly~~L~~Le~~GlI~~~~ 57 (179)
T 1yg2_A 6 VILTVLSTRDATGYDITKEFSASIG-YFWKASHQQVYRELNKMGEQGLVTCVL 57 (179)
T ss_dssp HHHHHHHHCCBCHHHHHHHHTTGGG-GTCCCCHHHHHHHHHHHHHTTSEEECC
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHhC-CccCCCcCcHHHHHHHHHHCCCeEEEe
Confidence 4777887789999999988743322 234456678899999999999998763
No 183
>1u2w_A CADC repressor, cadmium efflux system accessory protein; LEAD, SOFT metal ION resistance, ARSR/SM family, DNA binding protein; 1.90A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 3f72_A
Probab=34.85 E-value=41 Score=27.79 Aligned_cols=43 Identities=19% Similarity=0.105 Sum_probs=33.9
Q ss_pred HHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 411 AILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 411 ~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
+|+..+. +++.|..||...+- +...++..||..|++.|.|...
T Consensus 46 ~IL~~L~~~~~~s~~eLa~~l~---------is~stvs~~L~~L~~~Glv~~~ 89 (122)
T 1u2w_A 46 KITYALCQDEELCVCDIANILG---------VTIANASHHLRTLYKQGVVNFR 89 (122)
T ss_dssp HHHHHHHHSSCEEHHHHHHHHT---------CCHHHHHHHHHHHHHTTSEEEC
T ss_pred HHHHHHHHCCCcCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCeEEE
Confidence 5677775 67789999988852 3456888999999999999765
No 184
>3l7w_A Putative uncharacterized protein SMU.1704; PADR, transcriptional factor, transcription; HET: MSE; 2.20A {Streptococcus mutans} SCOP: a.4.5.0
Probab=32.15 E-value=31 Score=28.02 Aligned_cols=49 Identities=14% Similarity=0.054 Sum_probs=38.1
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
.|+..+.+++.+..+|.+.+-..+ .....++..+|..|+++|.|.+...
T Consensus 13 ~IL~~L~~~~~~gyel~~~l~~~~-----~i~~~tly~~L~~Le~~GlI~~~~~ 61 (108)
T 3l7w_A 13 LILAIVSKHDSYGYDISQTIKLIA-----SIKESTLYPILKKLEKAGYLSTYTQ 61 (108)
T ss_dssp HHHHHHHHSCEEHHHHHHHHTTTC-----CCCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHh-----CCCcChHHHHHHHHHHCCCeEEEee
Confidence 477778778888999998875422 2456778899999999999988743
No 185
>4esf_A PADR-like transcriptional regulator; PADR family, DNA binding protein, HTH fold; 2.20A {Bacillus cereus}
Probab=32.03 E-value=38 Score=28.09 Aligned_cols=50 Identities=14% Similarity=0.096 Sum_probs=38.7
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
-|+..+.+++.+..||.+.+-.. . .+.....++..+|.+|+++|.|....
T Consensus 15 ~IL~lL~~~p~~Gyei~~~l~~~-g--~~~is~gtlY~~L~rLe~~GlI~~~~ 64 (117)
T 4esf_A 15 CVLEIISRRETYGYEITRHLNDL-G--FTEVVEGTVYTILVRLEKKKLVNIEK 64 (117)
T ss_dssp HHHHHHHHSCBCHHHHHHHHHHH-T--CTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCCCHHHHHHHHHHc-C--CCCCCccHHHHHHHHHHHCCCEEEEe
Confidence 47778888899999999987432 1 23345678889999999999998874
No 186
>2p4w_A Transcriptional regulatory protein ARSR family; archaea, PHR, heat shock, transcriptional regulation, winged DNA binding; 2.60A {Pyrococcus furiosus} SCOP: a.4.5.64
Probab=31.42 E-value=33 Score=31.50 Aligned_cols=44 Identities=11% Similarity=0.080 Sum_probs=36.5
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
.|+..+.+++.+..||...+ .....++..||..|++.|.|....
T Consensus 19 ~IL~~L~~~~~s~~eLa~~l---------~is~stvs~hLk~Le~~GLV~~~~ 62 (202)
T 2p4w_A 19 RILFLLTKRPYFVSELSREL---------GVGQKAVLEHLRILEEAGLIESRV 62 (202)
T ss_dssp HHHHHHHHSCEEHHHHHHHH---------TCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhCCCCHHHHHHHH---------CcCHHHHHHHHHHHHHCCceEEEe
Confidence 57777778889999999987 245578899999999999998763
No 187
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=31.24 E-value=43 Score=25.93 Aligned_cols=46 Identities=13% Similarity=0.101 Sum_probs=35.0
Q ss_pred HHHHHHHHcC-CCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 410 AAILQAIENG-VETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 410 ~~il~~l~~g-~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
.+|+..+.++ +.|..||.+.+- ....++..||..|++.|.|.+...
T Consensus 27 ~~il~~l~~~~~~s~~ela~~l~---------is~~tvs~~l~~L~~~glv~~~~~ 73 (99)
T 3cuo_A 27 LLILCMLSGSPGTSAGELTRITG---------LSASATSQHLARMRDEGLIDSQRD 73 (99)
T ss_dssp HHHHHHHTTCCSEEHHHHHHHHC---------CCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHhCCCcCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCEEEEec
Confidence 4577777655 678999988862 345678899999999999987643
No 188
>2dql_A PEX protein; circadian clock associated protein, circadian clock protein; 1.70A {Anabaena SP}
Probab=30.64 E-value=36 Score=28.14 Aligned_cols=50 Identities=14% Similarity=0.217 Sum_probs=38.9
Q ss_pred HHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 412 ILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 412 il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
|+..+.+++.+-.||.+.+-...+ .+.....++..+|.+|+++|.|....
T Consensus 27 IL~lL~~~~~~Gyei~~~l~~~~~--~~~is~gtLY~~L~rLe~~GlI~~~~ 76 (115)
T 2dql_A 27 ILYVLLQGESYGTELIQQLETEHP--TYRLSDTVLYSAIKFLEDNRAITGYW 76 (115)
T ss_dssp HHHHHTTSCBCHHHHHHHHHHHCT--TEECCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHhCCCCHHHHHHHHHHHcC--CCCCCcchHHHHHHHHHHCCCEEEEe
Confidence 788888888899999888754322 23456678889999999999998763
No 189
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=30.14 E-value=42 Score=27.35 Aligned_cols=46 Identities=15% Similarity=0.250 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCC--HHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 411 AILQAIENGVET--LFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 411 ~il~~l~~g~~T--~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
.|+..+..|+.+ ..||.+.+ + .....++..||..|++.|.|.+...
T Consensus 31 ~IL~~L~~g~~~~~~~eL~~~l-~-------gis~~~ls~~L~~Le~~GlV~r~~~ 78 (111)
T 3df8_A 31 LIISVLGNGSTRQNFNDIRSSI-P-------GISSTILSRRIKDLIDSGLVERRSG 78 (111)
T ss_dssp HHHHHHTSSSSCBCHHHHHHTS-T-------TCCHHHHHHHHHHHHHTTSEEEEES
T ss_pred HHHHHHhcCCCCCCHHHHHHHc-c-------CCCHHHHHHHHHHHHHCCCEEEeec
Confidence 466667778877 99988864 1 1345678899999999999988754
No 190
>1z7u_A Hypothetical protein EF0647; winged-helix-turn-helix, MARR, structural genomics, PSI, Pro structure initiative; 2.20A {Enterococcus faecalis} SCOP: a.4.5.69
Probab=29.93 E-value=39 Score=27.42 Aligned_cols=46 Identities=4% Similarity=0.051 Sum_probs=35.3
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
.|+..+.+|+.+..||.+.+- .....++..+|..|++.|.|.+...
T Consensus 26 ~IL~~L~~~~~~~~eLa~~l~--------~is~~tvs~~L~~Le~~GlI~r~~~ 71 (112)
T 1z7u_A 26 SLMDELFQGTKRNGELMRALD--------GITQRVLTDRLREMEKDGLVHRESF 71 (112)
T ss_dssp HHHHHHHHSCBCHHHHHHHST--------TCCHHHHHHHHHHHHHHTSEEEEEE
T ss_pred HHHHHHHhCCCCHHHHHHHhc--------cCCHHHHHHHHHHHHHCCCEEEeec
Confidence 466666667889999988751 2345678899999999999988754
No 191
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=29.67 E-value=49 Score=28.61 Aligned_cols=48 Identities=10% Similarity=0.081 Sum_probs=36.6
Q ss_pred HHHHHHHc--CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 411 AILQAIEN--GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 411 ~il~~l~~--g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
.|++.+.+ ++.|++||.+.+-...+. ....+|...|+.|.+.|.|.+.
T Consensus 31 ~IL~~l~~~~~~~sa~ei~~~l~~~~~~----is~aTVYR~L~~L~e~Glv~~~ 80 (150)
T 2xig_A 31 EVVSVLYRSGTHLSPEEITHSIRQKDKN----TSISSVYRILNFLEKENFISVL 80 (150)
T ss_dssp HHHHHHHHCSSCBCHHHHHHHHHHHSTT----CCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHhCCC----CCHhhHHHHHHHHHHCCcEEEE
Confidence 47777653 467999999998655442 3456788899999999999876
No 192
>2esh_A Conserved hypothetical protein TM0937; APC5794, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.4.5.61
Probab=28.72 E-value=30 Score=28.59 Aligned_cols=53 Identities=11% Similarity=0.112 Sum_probs=37.1
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHH-HHHHHHHHHHHHCCCccceec
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAA-SNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~-~~v~ahL~~L~~~g~i~~~~~ 464 (522)
.|+..+.+++.+..||.+.+-. .....+.... .++..+|..|+++|.|.....
T Consensus 17 ~IL~~L~~~~~~gyel~~~l~~-~g~~~~~is~~~tly~~L~~Le~~GlI~~~~~ 70 (118)
T 2esh_A 17 TILLLVAEKPSHGYELAERLAE-FGIEIPGIGHMGNIYRVLADLEESGFLSTEWD 70 (118)
T ss_dssp HHHHHHHHSCBCHHHHHHHHHT-TCCSSTTCCCCCCHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHcCCCCHHHHHHHHHH-hCCcccCCCCcchHHHHHHHHHHCCCeEEEee
Confidence 4777787788999999998843 1110011333 566788999999999988743
No 193
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=28.37 E-value=1.1e+02 Score=26.73 Aligned_cols=49 Identities=8% Similarity=0.040 Sum_probs=36.7
Q ss_pred HHHHHHHHc--CCCCHHHHHHHHhcC--CCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 410 AAILQAIEN--GVETLFDIVANVYSE--VPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 410 ~~il~~l~~--g~~T~~ei~~~~y~~--~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
..|++.+.+ ++.|++||.+.+-.. .+. ....+|...|+.|.+.|.|.+.
T Consensus 36 ~~IL~~L~~~~~h~sA~eI~~~l~~~~~~~~----is~aTVYRtL~~L~e~Glv~~i 88 (162)
T 4ets_A 36 EVLLKTLYHSDTHYTPESLYMEIKQAEPDLN----VGIATVYRTLNLLEEAEMVTSI 88 (162)
T ss_dssp HHHHHHHHSCCSCBCHHHHHHHHHHHCGGGC----CCHHHHHHHHHHHHHTTSEEEC
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHhhcCCCC----CCHHHHHHHHHHHHHCCCEEEE
Confidence 357777764 456999999988655 332 3356788889999999999776
No 194
>1xma_A Predicted transcriptional regulator; southea collaboratory for structural genomics, secsg, protein struc initiative, PSI; 2.30A {Clostridium thermocellum} SCOP: a.4.5.61
Probab=28.35 E-value=27 Score=30.30 Aligned_cols=52 Identities=12% Similarity=0.215 Sum_probs=37.4
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
.|+..+.+++.+..||.+.+-..... .|.....++..+|.+|+++|.|.+..
T Consensus 45 ~IL~~L~~~~~~gyeI~~~l~~~~~~-~~~is~gtLy~~L~rLE~~GlI~~~~ 96 (145)
T 1xma_A 45 IILSLLIEGDSYGYEISKNIRIKTDE-LYVIKETTLYSAFARLEKNGYIKSYY 96 (145)
T ss_dssp HHHHHHHHCCEEHHHHHHHHHHHHTT-SCCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhCCCCHHHHHHHHHHhhCC-ccCcChhHHHHHHHHHHHCCCEEEEE
Confidence 46777777888999998877432111 12345678889999999999998874
No 195
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=27.80 E-value=61 Score=27.77 Aligned_cols=45 Identities=9% Similarity=0.109 Sum_probs=34.6
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
.|+..+.+|+.+..||.+.+ . ....++..||..|++.|.|.+...
T Consensus 28 ~IL~~L~~g~~~~~eLa~~l--g-------is~~tls~~L~~Le~~GlI~r~~~ 72 (146)
T 2f2e_A 28 LIVRDAFEGLTRFGEFQKSL--G-------LAKNILAARLRNLVEHGVMVAVPA 72 (146)
T ss_dssp HHHHHHHTTCCSHHHHHHHH--C-------CCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHhCCCCHHHHHHHh--C-------CCHHHHHHHHHHHHHCCCEEEEec
Confidence 35666667888999998886 3 334577889999999999988743
No 196
>1sd4_A Penicillinase repressor; BLAI, MECI, methicillin, B-lactam, DNA binding PR; 2.00A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1xsd_A
Probab=26.95 E-value=69 Score=26.06 Aligned_cols=50 Identities=12% Similarity=0.108 Sum_probs=37.1
Q ss_pred HHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceecc
Q 009940 411 AILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFSI 465 (522)
Q Consensus 411 ~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~~ 465 (522)
.|+..+- .++.|..||...+..+.+ +...++...|++|++.|.|.+..+.
T Consensus 14 ~vL~~L~~~~~~t~~el~~~l~~~~~-----~~~~Tvt~~l~rLe~kGlv~R~~~~ 64 (126)
T 1sd4_A 14 DVMNIIWDKKSVSANEIVVEIQKYKE-----VSDKTIRTLITRLYKKEIIKRYKSE 64 (126)
T ss_dssp HHHHHHHHSSSEEHHHHHHHHHTTSC-----CCHHHHHHHHHHHHHTTSEEEEEET
T ss_pred HHHHHHHhcCCCCHHHHHHHHhhcCC-----CChhhHHHHHHHHHHCCceEEEeCC
Confidence 4555553 467799999999864311 2457888999999999999988543
No 197
>2d1h_A ST1889, 109AA long hypothetical transcriptional regulator; helix-turn-helix, intermolecular and intramolecular S-S bond structural genomics; 2.05A {Sulfolobus tokodaii} SCOP: a.4.5.50
Probab=26.39 E-value=75 Score=24.67 Aligned_cols=44 Identities=11% Similarity=0.107 Sum_probs=33.3
Q ss_pred HHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 412 ILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 412 il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
++..+. .++.|..||.+.+ .....++..||..|++.|.|.+...
T Consensus 27 l~~l~~~~~~~t~~ela~~l---------~is~~tv~~~l~~L~~~g~v~~~~~ 71 (109)
T 2d1h_A 27 LLKMVEIEKPITSEELADIF---------KLSKTTVENSLKKLIELGLVVRTKT 71 (109)
T ss_dssp HHHHHHHCSCEEHHHHHHHH---------TCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHcCCCCCHHHHHHHH---------CcCHHHHHHHHHHHHHCCCeEeecc
Confidence 444444 5677999999875 2456788999999999999988744
No 198
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=25.94 E-value=92 Score=24.08 Aligned_cols=46 Identities=17% Similarity=0.147 Sum_probs=35.0
Q ss_pred HHHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 410 AAILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 410 ~~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
..|+..+. .++.|..||++.+ .....++..+|..|++.|.|.+...
T Consensus 23 ~~il~~l~~~~~~s~~ela~~l---------~is~~tv~~~l~~L~~~glv~~~~~ 69 (109)
T 1sfx_A 23 VRIYSLLLERGGMRVSEIAREL---------DLSARFVRDRLKVLLKRGFVRREIV 69 (109)
T ss_dssp HHHHHHHHHHCCBCHHHHHHHH---------TCCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHH---------CCCHHHHHHHHHHHHHCCCEEEEee
Confidence 34666654 4677999999886 2345788899999999999988744
No 199
>2fsw_A PG_0823 protein; alpha-beta structure, helix-turn-helix, winged-helix-turn-HE structural genomics, PSI, protein structure initiative; HET: MSE; 2.16A {Porphyromonas gingivalis} SCOP: a.4.5.69
Probab=25.83 E-value=46 Score=26.69 Aligned_cols=46 Identities=9% Similarity=0.012 Sum_probs=34.8
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
.|+..+.+|+.+..||.+.+- .....++..||..|++.|.|.+...
T Consensus 29 ~IL~~L~~~~~~~~eL~~~l~--------gis~~~ls~~L~~Le~~GlV~r~~~ 74 (107)
T 2fsw_A 29 LIIFQINRRIIRYGELKRAIP--------GISEKMLIDELKFLCGKGLIKKKQY 74 (107)
T ss_dssp HHHHHHTTSCEEHHHHHHHST--------TCCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHhCCcCHHHHHHHcc--------cCCHHHHHHHHHHHHHCCCEEEeec
Confidence 466666677788999888742 1345678899999999999988744
No 200
>2g9w_A Conserved hypothetical protein; DNA-binding domain, bacterial transcription repressor, DNA B protein; 1.80A {Mycobacterium tuberculosis} SCOP: a.4.5.39
Probab=25.77 E-value=74 Score=26.71 Aligned_cols=52 Identities=15% Similarity=0.086 Sum_probs=38.2
Q ss_pred HHHHHHHHHc--CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceecc
Q 009940 409 EAAILQAIEN--GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFSI 465 (522)
Q Consensus 409 ~~~il~~l~~--g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~~ 465 (522)
...|+..+.+ ++.|..||...+..+ . .+...++...|++|++.|.|.+..+.
T Consensus 11 e~~vL~~L~~~~~~~t~~el~~~l~~~-~----~~~~~Tvt~~l~rLe~kGlv~r~~~~ 64 (138)
T 2g9w_A 11 ERAVMDHLWSRTEPQTVRQVHEALSAR-R----DLAYTTVMAVLQRLAKKNLVLQIRDD 64 (138)
T ss_dssp HHHHHHHHHTCSSCEEHHHHHHHHTTT-C----CCCHHHHHHHHHHHHHTTSEEEEC--
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHhcc-C----CCCHHHHHHHHHHHHHCCCEEEEecC
Confidence 3457777753 678999999998654 1 13456888999999999999987543
No 201
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=25.56 E-value=15 Score=30.18 Aligned_cols=60 Identities=12% Similarity=0.128 Sum_probs=36.4
Q ss_pred HHHHHHHHcCCCCHHHHHHHHhc-CCCCcchhHHHHH-HHHHHHHHHHCCCcc-ceeccchhhh-ccchhh
Q 009940 410 AAILQAIENGVETLFDIVANVYS-EVPRSFWIPAASN-VRLHVDHLADQNKLP-KEFSILKFRK-TCGLHF 476 (522)
Q Consensus 410 ~~il~~l~~g~~T~~ei~~~~y~-~~~~~~~~~a~~~-v~ahL~~L~~~g~i~-~~~~~~~~~~-~~~~~~ 476 (522)
++|.+++.+++.|+.||...+=- ..++ .+ |..||+++...-+-. ..+...++++ .||..|
T Consensus 14 e~Ii~lL~~~plta~ei~~~l~i~~~~~-------ke~Vy~hLeHIaksl~r~g~~L~v~p~~C~~CG~~F 77 (105)
T 2gmg_A 14 EKIIELLLEGDYSPSELARILDMRGKGS-------KKVILEDLKVISKIAKREGMVLLIKPAQCRKCGFVF 77 (105)
T ss_dssp HHHHHHTTTSCBCTTHHHHSSCCCSSCC-------HHHHHHHHHHHHHHHTTTTEEEEECCCBBTTTCCBC
T ss_pred HHHHHHHHcCCCCHHHHHHHhCCCCCCh-------HHHHHHHHHHHHHHHhcCCcEEEEECcChhhCcCee
Confidence 34667777788999999887532 1222 22 566677665432221 2456667777 888655
No 202
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=25.53 E-value=81 Score=28.30 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=27.2
Q ss_pred CCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 420 VETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 420 ~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
+.|..||++.+- +...++..||..|++.|.|.+.
T Consensus 24 ~~s~~eia~~lg---------l~~~tv~~~l~~Le~~G~i~~~ 57 (196)
T 3k2z_A 24 PPSVREIARRFR---------ITPRGALLHLIALEKKGYIERK 57 (196)
T ss_dssp CCCHHHHHHHHT---------SCHHHHHHHHHHHHHTTSEECC
T ss_pred CCCHHHHHHHcC---------CCcHHHHHHHHHHHHCCCEEec
Confidence 469999998852 2234689999999999999876
No 203
>3tgn_A ADC operon repressor ADCR; helix-turn-helix, transcriptional regulator, transcription; 2.00A {Streptococcus pneumoniae}
Probab=23.04 E-value=81 Score=26.08 Aligned_cols=45 Identities=13% Similarity=0.125 Sum_probs=33.3
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceec
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFS 464 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~ 464 (522)
.|+..+..++.|..||++.+- ....++..+++.|++.|.|.+..+
T Consensus 42 ~iL~~l~~~~~t~~eLa~~l~---------~s~~tvs~~l~~L~~~Glv~r~~~ 86 (146)
T 3tgn_A 42 HILMLLSEESLTNSELARRLN---------VSQAAVTKAIKSLVKEGMLETSKD 86 (146)
T ss_dssp HHHHHHTTCCCCHHHHHHHHT---------CCHHHHHHHHHHHHHTTSEEC---
T ss_pred HHHHHHHhCCCCHHHHHHHHC---------CCHHHHHHHHHHHHHCCCeEeccC
Confidence 466666654589999999863 345678899999999999988754
No 204
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=22.94 E-value=1.3e+02 Score=25.45 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=34.4
Q ss_pred HHHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 410 AAILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 410 ~~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
.+|+..+. ++..|..||.+.+- +...++..++..|++.|.|.+.
T Consensus 10 ~~iL~~L~~~~~~s~~ela~~lg---------~s~~tv~~~l~~L~~~G~i~~~ 54 (150)
T 2w25_A 10 RILVRELAADGRATLSELATRAG---------LSVSAVQSRVRRLESRGVVQGY 54 (150)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHT---------SCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCEEEE
Confidence 35777765 46679999999852 4567889999999999999765
No 205
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=22.65 E-value=1.1e+02 Score=26.41 Aligned_cols=44 Identities=9% Similarity=0.233 Sum_probs=35.5
Q ss_pred HHHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 410 AAILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 410 ~~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
.+|++.++ ++..|..||.+.+ .+...++..++++|+++|.|.+.
T Consensus 6 ~~il~~L~~~~~~s~~~la~~l---------g~s~~tv~~rl~~L~~~g~i~~~ 50 (162)
T 3i4p_A 6 RKILRILQEDSTLAVADLAKKV---------GLSTTPCWRRIQKMEEDGVIRRR 50 (162)
T ss_dssp HHHHHHHTTCSCSCHHHHHHHH---------TCCHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHCCCCCHHHHHHHH---------CcCHHHHHHHHHHHHHCCCeeec
Confidence 46888886 4667999999885 35567899999999999999854
No 206
>2lkp_A Transcriptional regulator, ARSR family; symmetric homodimer, NI(II) binding protein, DNA binding Pro transcription regulator; NMR {Mycobacterium tuberculosis}
Probab=21.68 E-value=79 Score=25.54 Aligned_cols=44 Identities=18% Similarity=0.185 Sum_probs=33.5
Q ss_pred HHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
+|+..+.+++.+..|+.+.+- ....++..||..|++.|.+....
T Consensus 36 ~il~~L~~~~~s~~ela~~l~---------is~stvsr~l~~Le~~Glv~~~~ 79 (119)
T 2lkp_A 36 MILTQLRNGPLPVTDLAEAIG---------MEQSAVSHQLRVLRNLGLVVGDR 79 (119)
T ss_dssp HHHHHHHHCCCCHHHHHHHHS---------SCHHHHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHCCCCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCEEEEe
Confidence 466666656679999988852 34567889999999999997663
No 207
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=21.62 E-value=1.4e+02 Score=23.58 Aligned_cols=45 Identities=20% Similarity=0.131 Sum_probs=34.4
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 408 REAAILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 408 r~~~il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
-...|+..+..+ .+..+|+..+ .+...++..+++.|+++|.|.+.
T Consensus 9 Ii~~IL~~i~~~-~~~t~La~~~---------~ls~~~~~~~l~~L~~~GLI~~~ 53 (95)
T 1r7j_A 9 IIQAILEACKSG-SPKTRIMYGA---------NLSYALTGRYIKMLMDLEIIRQE 53 (95)
T ss_dssp HHHHHHHHHTTC-BCHHHHHHHH---------TCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcC-CCHHHHHHHh---------CcCHHHHHHHHHHHHHCCCeEEE
Confidence 345567777666 6788887764 25667899999999999999887
No 208
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=21.56 E-value=2.3e+02 Score=21.70 Aligned_cols=50 Identities=14% Similarity=0.139 Sum_probs=33.5
Q ss_pred HHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceecc
Q 009940 411 AILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFSI 465 (522)
Q Consensus 411 ~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~~ 465 (522)
.|+..+. .++.|..||+..+-..+. ....++..+++.|++.|.|.+..+.
T Consensus 12 ~iL~~l~~~~~~~~~el~~~la~~l~-----is~~tvs~~l~~Le~~gli~r~~~~ 62 (99)
T 1tbx_A 12 IVLAYLYDNEGIATYDLYKKVNAEFP-----MSTATFYDAKKFLIQEGFVKERQER 62 (99)
T ss_dssp HHHHHHTTCTTCBHHHHHHHHHTTSC-----CCHHHHHHHHHHHHHTTSEEEEEET
T ss_pred HHHHHHHHcCCcCHHHHHHHHHHHcC-----CCHHHHHHHHHHHHHCCCEEEEecC
Confidence 4555554 356788888644422222 3446778899999999999887544
No 209
>1sfu_A 34L protein; protein/Z-DNA complex, DNA binding protein/DNA complex; 2.00A {Yaba-like disease virus} SCOP: a.4.5.19
Probab=21.47 E-value=79 Score=24.27 Aligned_cols=53 Identities=9% Similarity=0.069 Sum_probs=35.6
Q ss_pred HHHHHHHcCC-CCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccceecc-chhhhcc
Q 009940 411 AILQAIENGV-ETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEFSI-LKFRKTC 472 (522)
Q Consensus 411 ~il~~l~~g~-~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~~~-~~~~~~~ 472 (522)
+.+..+.++. .|+.+|+.++ ...-.++..+|-.|++.|+|...-+. -.|.-.|
T Consensus 19 ~~i~~L~~~~~~Ta~~IAkkL---------g~sK~~vNr~LY~L~kkG~V~~~~~~PP~W~~~~ 73 (75)
T 1sfu_A 19 KEVLSLNTNDYTTAISLSNRL---------KINKKKINQQLYKLQKEDTVKMVPSNPPKWFKNY 73 (75)
T ss_dssp HHHHTSCTTCEECHHHHHHHT---------TCCHHHHHHHHHHHHHTTSEEEECCSSCEEEECT
T ss_pred HHHHhCCCCcchHHHHHHHHH---------CCCHHHHHHHHHHHHHCCCEecCCCCCCCccCCC
Confidence 3344444555 6899998884 24456788999999999999877333 3344444
No 210
>2e1n_A PEX, period extender; circadian clock, DNA binding protein, circadian clock protei; 1.80A {Synechococcus elongatus pcc 7942}
Probab=21.29 E-value=48 Score=28.43 Aligned_cols=50 Identities=8% Similarity=0.159 Sum_probs=38.7
Q ss_pred HHHHHHcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 412 ILQAIENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 412 il~~l~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
|+..+.+++.+-.||.+.+-.... .+.....++..+|.+|+++|.|....
T Consensus 39 IL~lL~~~~~~Gyei~k~l~~~~~--~~~is~gtLYp~L~rLe~~GlI~~~~ 88 (138)
T 2e1n_A 39 VLAVLRHEDSYGTELIQHLETHWP--NYRLSDTVLYTALKFLEDEQIISGYW 88 (138)
T ss_dssp HHHHHTTSCEEHHHHHHHHHHHST--TEECCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHhCCCcHHHHHHHHHHHcC--CCCCCccHHHHHHHHHHHCCCEEEEe
Confidence 788888888889999888754321 33456678889999999999998763
No 211
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=20.95 E-value=1.4e+02 Score=26.22 Aligned_cols=45 Identities=18% Similarity=0.258 Sum_probs=35.1
Q ss_pred HHHHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 409 EAAILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 409 ~~~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
..+|++.++ ++..|..||.+.+- +...++..++..|++.|.|.+.
T Consensus 29 d~~IL~~L~~~~~~s~~eLA~~lg---------lS~~tv~~rl~~L~~~G~I~~~ 74 (171)
T 2e1c_A 29 DKKIIKILQNDGKAPLREISKITG---------LAESTIHERIRKLRESGVIKKF 74 (171)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHT---------SCHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCeEee
Confidence 346777776 46679999998852 4567789999999999999764
No 212
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=20.93 E-value=1.3e+02 Score=25.33 Aligned_cols=44 Identities=11% Similarity=0.174 Sum_probs=34.6
Q ss_pred HHHHHHHHc-CCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 410 AAILQAIEN-GVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 410 ~~il~~l~~-g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
.+|+..+++ +..|..||.+.+ .....++..|+..|++.|.|.+.
T Consensus 6 ~~il~~L~~~~~~~~~ela~~l---------g~s~~tv~~~l~~L~~~G~i~~~ 50 (150)
T 2pn6_A 6 LRILKILQYNAKYSLDEIAREI---------RIPKATLSYRIKKLEKDGVIKGY 50 (150)
T ss_dssp HHHHHHHTTCTTSCHHHHHHHH---------TSCHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHH---------CcCHHHHHHHHHHHHHCCcEEEE
Confidence 357777764 557999999885 24567889999999999999874
No 213
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=20.78 E-value=1.3e+02 Score=25.86 Aligned_cols=44 Identities=23% Similarity=0.243 Sum_probs=34.6
Q ss_pred HHHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 410 AAILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 410 ~~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
.+|++.++ ++..|..||.+.+- +...++..++..|++.|.|.+.
T Consensus 13 ~~il~~L~~~~~~s~~ela~~lg---------~s~~tv~~~l~~L~~~G~i~~~ 57 (162)
T 2p5v_A 13 IKILQVLQENGRLTNVELSERVA---------LSPSPCLRRLKQLEDAGIVRQY 57 (162)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHT---------SCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCEeee
Confidence 35777775 45679999998852 4467889999999999999865
No 214
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=20.54 E-value=63 Score=24.91 Aligned_cols=44 Identities=11% Similarity=0.064 Sum_probs=33.4
Q ss_pred HHHHHH-HcCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCcccee
Q 009940 411 AILQAI-ENGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKEF 463 (522)
Q Consensus 411 ~il~~l-~~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~~ 463 (522)
+|+..+ ..++.|..||.+.+ .....++..||..|++.|.|.+..
T Consensus 20 ~iL~~L~~~~~~~~~ela~~l---------~is~~tvs~~l~~L~~~gli~~~~ 64 (100)
T 1ub9_A 20 GIMIFLLPRRKAPFSQIQKVL---------DLTPGNLDSHIRVLERNGLVKTYK 64 (100)
T ss_dssp HHHHHHHHHSEEEHHHHHHHT---------TCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhcCCcCHHHHHHHH---------CcCHHHHHHHHHHHHHCCCEEEEe
Confidence 466655 35677999999886 234567889999999999998654
No 215
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=20.31 E-value=1.4e+02 Score=25.12 Aligned_cols=44 Identities=9% Similarity=0.155 Sum_probs=34.5
Q ss_pred HHHHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 410 AAILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 410 ~~il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
.+|++.++ ++..|..||.+.+- ....++..++..|+++|.|.+.
T Consensus 8 ~~il~~L~~~~~~s~~ela~~lg---------~s~~tv~~~l~~L~~~G~i~~~ 52 (144)
T 2cfx_A 8 LNIIEELKKDSRLSMRELGRKIK---------LSPPSVTERVRQLESFGIIKQY 52 (144)
T ss_dssp HHHHHHHHHCSCCCHHHHHHHHT---------CCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHC---------cCHHHHHHHHHHHHHCCCeEEE
Confidence 35777775 45679999998852 4567889999999999999865
No 216
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=20.18 E-value=1.3e+02 Score=25.62 Aligned_cols=47 Identities=19% Similarity=0.192 Sum_probs=35.3
Q ss_pred HHHHHH-cCCCCHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHCCCccce
Q 009940 412 ILQAIE-NGVETLFDIVANVYSEVPRSFWIPAASNVRLHVDHLADQNKLPKE 462 (522)
Q Consensus 412 il~~l~-~g~~T~~ei~~~~y~~~~~~~~~~a~~~v~ahL~~L~~~g~i~~~ 462 (522)
|++.+. .+..|++||...+-...+. ....+|...|+.|.+.|.|.+.
T Consensus 24 Il~~l~~~~h~ta~ei~~~l~~~~~~----is~~TVYR~L~~L~e~Glv~~i 71 (145)
T 3eyy_A 24 VLEAVDTLEHATPDDILGEVRKTASG----INISTVYRTLELLEELGLVSHA 71 (145)
T ss_dssp HHHHHHHHSSBCHHHHHHHHHTTCTT----CCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHhcCCCCHHHHHHHHHhhCCC----CCHhHHHHHHHHHHHCCcEEEE
Confidence 455443 2367999999998766553 3456788899999999999876
Done!