Query 009946
Match_columns 522
No_of_seqs 634 out of 3231
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 16:28:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009946.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009946hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xtp_A LMAJ004091AAA; SGPP, st 99.6 1.3E-15 4.4E-20 148.2 9.8 133 215-350 93-237 (254)
2 3hnr_A Probable methyltransfer 99.6 7.3E-15 2.5E-19 140.0 14.8 135 216-355 46-205 (220)
3 4hg2_A Methyltransferase type 99.6 5.4E-16 1.8E-20 154.2 6.9 98 217-320 41-138 (257)
4 2p7i_A Hypothetical protein; p 99.6 2E-15 7E-20 145.3 10.8 130 216-350 43-198 (250)
5 3ujc_A Phosphoethanolamine N-m 99.6 1.1E-14 3.6E-19 142.3 15.2 133 215-350 55-205 (266)
6 3bus_A REBM, methyltransferase 99.6 1.1E-14 3.8E-19 143.4 15.2 151 189-350 43-215 (273)
7 1vl5_A Unknown conserved prote 99.6 1.1E-14 3.8E-19 142.8 14.1 132 215-351 37-190 (260)
8 3h2b_A SAM-dependent methyltra 99.6 3.7E-15 1.3E-19 140.5 10.0 131 217-351 43-182 (203)
9 3dlc_A Putative S-adenosyl-L-m 99.6 9.5E-15 3.2E-19 138.1 12.7 129 218-349 46-201 (219)
10 3l8d_A Methyltransferase; stru 99.6 1E-14 3.5E-19 140.8 12.3 131 216-350 54-199 (242)
11 2o57_A Putative sarcosine dime 99.6 2.2E-14 7.4E-19 143.5 14.9 150 190-350 61-233 (297)
12 3kkz_A Uncharacterized protein 99.6 3.9E-14 1.3E-18 139.6 15.9 131 215-349 46-194 (267)
13 3dli_A Methyltransferase; PSI- 99.6 5.7E-15 1.9E-19 143.4 9.7 128 215-349 41-182 (240)
14 3g5l_A Putative S-adenosylmeth 99.6 3.4E-14 1.2E-18 138.6 14.2 134 215-351 44-216 (253)
15 1nkv_A Hypothetical protein YJ 99.6 2.1E-14 7.2E-19 139.9 12.7 145 191-347 20-183 (256)
16 3f4k_A Putative methyltransfer 99.5 1E-13 3.4E-18 135.2 16.4 129 215-347 46-192 (257)
17 3ou2_A SAM-dependent methyltra 99.5 3.5E-14 1.2E-18 134.5 12.7 129 216-349 47-203 (218)
18 3dh0_A SAM dependent methyltra 99.5 4.9E-14 1.7E-18 134.1 13.1 134 216-350 38-180 (219)
19 4gek_A TRNA (CMO5U34)-methyltr 99.5 6.5E-14 2.2E-18 139.4 13.9 101 215-318 70-179 (261)
20 3sm3_A SAM-dependent methyltra 99.5 1.1E-13 3.6E-18 132.4 14.8 132 216-351 31-207 (235)
21 3pfg_A N-methyltransferase; N, 99.5 1E-13 3.6E-18 136.1 15.1 98 216-317 51-151 (263)
22 1xxl_A YCGJ protein; structura 99.5 9.2E-14 3.2E-18 135.0 14.4 131 215-350 21-173 (239)
23 2ex4_A Adrenal gland protein A 99.5 4.2E-14 1.4E-18 137.3 12.0 134 215-351 79-225 (241)
24 2p35_A Trans-aconitate 2-methy 99.5 2.5E-14 8.4E-19 139.5 10.3 103 215-320 33-135 (259)
25 1pjz_A Thiopurine S-methyltran 99.5 1.5E-14 5E-19 138.0 8.4 130 216-350 23-175 (203)
26 3dtn_A Putative methyltransfer 99.5 1.1E-13 3.9E-18 133.1 14.8 103 214-319 43-150 (234)
27 3e23_A Uncharacterized protein 99.5 3.1E-14 1.1E-18 135.1 10.3 130 216-351 44-182 (211)
28 3ccf_A Cyclopropane-fatty-acyl 99.5 8E-14 2.7E-18 138.4 13.1 129 215-349 57-208 (279)
29 3gu3_A Methyltransferase; alph 99.5 1.5E-13 5.2E-18 137.2 15.1 103 215-319 22-128 (284)
30 3bkw_A MLL3908 protein, S-aden 99.5 6.9E-14 2.4E-18 134.8 11.7 132 215-350 43-213 (243)
31 3cgg_A SAM-dependent methyltra 99.5 2.4E-13 8.1E-18 125.8 14.9 126 216-350 47-174 (195)
32 4htf_A S-adenosylmethionine-de 99.5 5.9E-14 2E-18 139.6 11.4 132 216-351 69-232 (285)
33 3jwg_A HEN1, methyltransferase 99.5 1.4E-13 4.7E-18 131.4 13.5 117 191-317 13-141 (219)
34 3ege_A Putative methyltransfer 99.5 5.7E-14 1.9E-18 138.4 11.1 142 194-350 21-177 (261)
35 2yqz_A Hypothetical protein TT 99.5 1E-13 3.5E-18 135.3 12.7 99 215-317 39-141 (263)
36 4fsd_A Arsenic methyltransfera 99.5 6.1E-14 2.1E-18 146.6 11.8 135 215-350 83-250 (383)
37 3vc1_A Geranyl diphosphate 2-C 99.5 1.1E-13 3.8E-18 140.0 13.4 135 214-352 116-270 (312)
38 1vlm_A SAM-dependent methyltra 99.5 1.4E-13 4.7E-18 131.9 12.4 125 216-350 48-187 (219)
39 1y8c_A S-adenosylmethionine-de 99.5 4.1E-13 1.4E-17 129.3 15.7 116 193-318 21-143 (246)
40 3i9f_A Putative type 11 methyl 99.5 9.1E-14 3.1E-18 127.2 10.4 127 216-351 18-148 (170)
41 3mgg_A Methyltransferase; NYSG 99.5 1.7E-13 5.8E-18 135.4 13.1 135 215-351 37-198 (276)
42 3bxo_A N,N-dimethyltransferase 99.5 3.2E-13 1.1E-17 129.8 14.0 99 216-318 41-142 (239)
43 1kpg_A CFA synthase;, cyclopro 99.5 1.4E-13 4.8E-18 136.9 11.7 130 215-350 64-227 (287)
44 3ocj_A Putative exported prote 99.5 1.7E-13 5.7E-18 138.3 12.0 134 215-350 118-290 (305)
45 3g2m_A PCZA361.24; SAM-depende 99.5 1.2E-13 4.1E-18 138.7 10.5 99 217-319 84-192 (299)
46 3lcc_A Putative methyl chlorid 99.5 1.7E-13 5.7E-18 132.4 11.1 129 217-350 68-206 (235)
47 3e8s_A Putative SAM dependent 99.5 1.3E-13 4.6E-18 130.8 10.2 129 216-350 53-208 (227)
48 2aot_A HMT, histamine N-methyl 99.5 4.9E-14 1.7E-18 141.4 7.4 131 215-347 52-217 (292)
49 4e2x_A TCAB9; kijanose, tetron 99.5 1.6E-14 5.4E-19 152.0 3.4 132 215-350 107-252 (416)
50 1ve3_A Hypothetical protein PH 99.5 3.3E-13 1.1E-17 128.7 12.1 100 216-319 39-144 (227)
51 3jwh_A HEN1; methyltransferase 99.4 9E-13 3.1E-17 125.7 14.8 100 216-317 30-141 (217)
52 2gs9_A Hypothetical protein TT 99.4 1.6E-13 5.6E-18 129.9 9.1 100 215-320 36-135 (211)
53 3hem_A Cyclopropane-fatty-acyl 99.4 6.5E-13 2.2E-17 133.5 14.0 130 215-350 72-242 (302)
54 2kw5_A SLR1183 protein; struct 99.4 4.3E-13 1.5E-17 126.2 11.5 128 218-351 32-171 (202)
55 3ofk_A Nodulation protein S; N 99.4 4.8E-13 1.6E-17 127.2 11.4 100 215-319 51-156 (216)
56 2gb4_A Thiopurine S-methyltran 99.4 3.8E-13 1.3E-17 133.2 11.0 129 216-349 69-225 (252)
57 3cc8_A Putative methyltransfer 99.4 4.3E-13 1.5E-17 127.5 11.0 131 215-351 32-185 (230)
58 3g5t_A Trans-aconitate 3-methy 99.4 8.1E-13 2.8E-17 132.6 11.4 100 215-316 36-148 (299)
59 3thr_A Glycine N-methyltransfe 99.4 2.6E-13 8.9E-18 135.2 7.6 116 193-319 43-177 (293)
60 3orh_A Guanidinoacetate N-meth 99.4 4.2E-13 1.4E-17 131.0 8.7 143 193-346 47-205 (236)
61 2avn_A Ubiquinone/menaquinone 99.4 5.4E-13 1.8E-17 131.2 9.5 101 216-320 55-155 (260)
62 1ri5_A MRNA capping enzyme; me 99.4 1.2E-12 4.1E-17 129.9 11.7 134 216-352 65-251 (298)
63 2fk8_A Methoxy mycolic acid sy 99.4 6.9E-13 2.4E-17 134.1 10.0 100 215-320 90-197 (318)
64 3mti_A RRNA methylase; SAM-dep 99.4 1.5E-12 5E-17 120.9 10.8 102 215-319 22-137 (185)
65 3g07_A 7SK snRNA methylphospha 99.4 2.8E-12 9.4E-17 129.0 13.6 135 215-351 46-269 (292)
66 3lpm_A Putative methyltransfer 99.4 2.2E-12 7.6E-17 127.1 12.3 164 215-389 49-245 (259)
67 2zfu_A Nucleomethylin, cerebra 99.4 1.4E-12 4.8E-17 124.0 9.9 111 216-350 68-178 (215)
68 3dmg_A Probable ribosomal RNA 99.4 1.5E-12 5E-17 136.5 10.9 103 215-321 233-344 (381)
69 3m33_A Uncharacterized protein 99.4 2.1E-12 7.3E-17 124.4 10.9 118 216-352 49-168 (226)
70 2g72_A Phenylethanolamine N-me 99.4 3.4E-12 1.2E-16 127.4 12.6 133 215-350 71-255 (289)
71 2pxx_A Uncharacterized protein 99.4 3.8E-12 1.3E-16 119.9 12.1 102 216-320 43-162 (215)
72 2p8j_A S-adenosylmethionine-de 99.3 2.4E-12 8.2E-17 121.3 10.0 99 216-318 24-129 (209)
73 1zx0_A Guanidinoacetate N-meth 99.3 1.6E-12 5.4E-17 126.0 9.0 143 192-345 46-204 (236)
74 2xvm_A Tellurite resistance pr 99.3 4E-12 1.4E-16 118.5 11.3 129 216-351 33-173 (199)
75 2i62_A Nicotinamide N-methyltr 99.3 1.5E-12 5.1E-17 127.1 7.8 133 215-350 56-238 (265)
76 1yzh_A TRNA (guanine-N(7)-)-me 99.3 1.1E-11 3.7E-16 118.3 13.4 125 216-350 42-181 (214)
77 2a14_A Indolethylamine N-methy 99.3 1E-12 3.5E-17 130.0 5.6 133 215-350 55-237 (263)
78 3bkx_A SAM-dependent methyltra 99.3 9.8E-12 3.3E-16 122.4 12.5 104 215-319 43-161 (275)
79 1dus_A MJ0882; hypothetical pr 99.3 5.1E-11 1.7E-15 109.9 16.5 132 176-320 20-160 (194)
80 2vdw_A Vaccinia virus capping 99.3 2.7E-12 9.1E-17 130.3 8.0 101 216-319 49-171 (302)
81 3d2l_A SAM-dependent methyltra 99.3 1.2E-11 4.3E-16 118.9 12.2 98 217-319 35-139 (243)
82 1wzn_A SAM-dependent methyltra 99.3 1.2E-11 4.2E-16 120.2 11.7 101 215-319 41-147 (252)
83 3grz_A L11 mtase, ribosomal pr 99.3 2.1E-11 7.3E-16 115.0 13.1 119 216-350 61-184 (205)
84 3e05_A Precorrin-6Y C5,15-meth 99.3 1E-10 3.4E-15 110.5 17.0 117 216-345 41-162 (204)
85 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.2E-11 4E-16 118.8 10.3 124 216-349 39-177 (213)
86 3m70_A Tellurite resistance pr 99.3 1E-11 3.5E-16 123.5 10.1 97 216-317 121-223 (286)
87 3njr_A Precorrin-6Y methylase; 99.3 9.2E-11 3.2E-15 111.8 16.3 118 216-350 56-179 (204)
88 3evz_A Methyltransferase; NYSG 99.3 2.6E-11 9E-16 116.3 12.4 124 215-348 55-203 (230)
89 2yxd_A Probable cobalt-precorr 99.3 7.9E-11 2.7E-15 107.8 14.9 137 192-355 20-161 (183)
90 1p91_A Ribosomal RNA large sub 99.3 1.1E-11 3.9E-16 121.9 9.5 96 216-320 86-181 (269)
91 3q87_B N6 adenine specific DNA 99.2 3.1E-11 1.1E-15 111.6 11.3 116 216-350 24-148 (170)
92 2ozv_A Hypothetical protein AT 99.2 2E-11 6.9E-16 120.8 10.6 157 216-383 37-231 (260)
93 3eey_A Putative rRNA methylase 99.2 1.4E-11 4.7E-16 115.5 8.8 104 216-319 23-141 (197)
94 3hm2_A Precorrin-6Y C5,15-meth 99.2 9.8E-11 3.4E-15 107.2 14.4 118 216-348 26-150 (178)
95 3mq2_A 16S rRNA methyltransfer 99.2 1.7E-11 5.8E-16 116.9 9.5 133 216-350 28-183 (218)
96 3p9n_A Possible methyltransfer 99.2 1.7E-11 5.9E-16 114.5 9.1 134 176-319 12-155 (189)
97 2r3s_A Uncharacterized protein 99.2 5.4E-11 1.9E-15 120.7 13.4 132 215-350 165-322 (335)
98 3htx_A HEN1; HEN1, small RNA m 99.2 5.1E-11 1.7E-15 133.9 14.1 119 192-320 706-837 (950)
99 3bgv_A MRNA CAP guanine-N7 met 99.2 1.4E-11 4.6E-16 124.6 8.2 103 215-320 34-158 (313)
100 3dp7_A SAM-dependent methyltra 99.2 3.9E-11 1.3E-15 124.3 11.9 131 215-349 179-340 (363)
101 2ld4_A Anamorsin; methyltransf 99.2 1.7E-11 5.7E-16 113.2 7.8 112 214-343 11-128 (176)
102 3ggd_A SAM-dependent methyltra 99.2 1.2E-11 4.1E-16 119.9 7.1 100 216-319 57-165 (245)
103 3i53_A O-methyltransferase; CO 99.2 1.1E-10 3.6E-15 119.1 14.1 131 215-350 169-320 (332)
104 4df3_A Fibrillarin-like rRNA/T 99.2 3.9E-11 1.3E-15 117.6 10.3 134 214-350 76-216 (233)
105 3gwz_A MMCR; methyltransferase 99.2 2.6E-10 8.7E-15 118.4 16.9 131 215-350 202-355 (369)
106 1xdz_A Methyltransferase GIDB; 99.2 2.6E-11 9E-16 117.9 8.6 123 215-349 70-200 (240)
107 1nt2_A Fibrillarin-like PRE-rR 99.2 8.6E-11 2.9E-15 112.8 12.0 127 215-351 57-195 (210)
108 1fbn_A MJ fibrillarin homologu 99.2 1.4E-10 5E-15 111.9 13.3 127 215-350 74-212 (230)
109 3hp7_A Hemolysin, putative; st 99.2 1.6E-10 5.5E-15 116.8 14.0 156 175-347 52-228 (291)
110 1l3i_A Precorrin-6Y methyltran 99.2 2.1E-10 7.3E-15 105.5 13.3 131 193-347 19-156 (192)
111 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.4E-10 4.8E-15 112.9 12.7 122 215-350 96-223 (258)
112 3opn_A Putative hemolysin; str 99.2 1.6E-11 5.6E-16 120.0 5.9 121 215-349 37-182 (232)
113 3iv6_A Putative Zn-dependent a 99.2 6.9E-11 2.3E-15 117.8 10.3 99 215-319 45-150 (261)
114 2ipx_A RRNA 2'-O-methyltransfe 99.2 8.6E-11 2.9E-15 113.5 10.4 131 215-349 77-215 (233)
115 1qzz_A RDMB, aclacinomycin-10- 99.2 1.9E-10 6.6E-15 118.7 13.7 131 215-350 182-338 (374)
116 4dcm_A Ribosomal RNA large sub 99.2 3.3E-11 1.1E-15 126.0 7.4 102 217-321 224-338 (375)
117 1yb2_A Hypothetical protein TA 99.1 1.1E-10 3.7E-15 116.1 10.6 121 215-350 110-236 (275)
118 2frn_A Hypothetical protein PH 99.1 3E-10 1E-14 113.5 13.6 153 175-347 95-253 (278)
119 3g89_A Ribosomal RNA small sub 99.1 5.4E-11 1.8E-15 117.3 7.9 124 215-350 80-211 (249)
120 2ip2_A Probable phenazine-spec 99.1 2.6E-10 8.8E-15 116.1 13.1 129 217-349 169-320 (334)
121 3p2e_A 16S rRNA methylase; met 99.1 1.3E-10 4.5E-15 112.7 10.4 134 216-350 25-184 (225)
122 1ej0_A FTSJ; methyltransferase 99.1 2.4E-10 8.1E-15 103.3 11.4 94 215-320 22-139 (180)
123 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.8E-10 6.1E-15 112.6 11.3 121 216-346 47-190 (235)
124 1af7_A Chemotaxis receptor met 99.1 1.1E-10 3.9E-15 116.9 9.7 102 216-318 106-253 (274)
125 2pjd_A Ribosomal RNA small sub 99.1 2.8E-11 9.7E-16 124.5 5.2 100 217-320 198-306 (343)
126 1x19_A CRTF-related protein; m 99.1 3.9E-10 1.3E-14 116.2 13.1 131 215-350 190-347 (359)
127 3dxy_A TRNA (guanine-N(7)-)-me 99.1 3.6E-11 1.2E-15 116.2 5.0 102 216-319 35-152 (218)
128 3lbf_A Protein-L-isoaspartate 99.1 2.3E-10 8E-15 108.1 10.3 95 215-319 77-176 (210)
129 2nxc_A L11 mtase, ribosomal pr 99.1 1.7E-10 5.9E-15 113.7 9.6 119 216-350 121-243 (254)
130 2qe6_A Uncharacterized protein 99.1 3.5E-10 1.2E-14 113.1 11.7 102 216-319 78-198 (274)
131 3lst_A CALO1 methyltransferase 99.1 3.5E-10 1.2E-14 116.3 11.7 130 215-350 184-335 (348)
132 3bwc_A Spermidine synthase; SA 99.1 2.3E-10 8E-15 116.0 10.1 127 215-347 95-236 (304)
133 3fpf_A Mtnas, putative unchara 99.1 2.2E-10 7.6E-15 115.9 9.9 97 214-318 121-223 (298)
134 1tw3_A COMT, carminomycin 4-O- 99.1 6.3E-10 2.2E-14 114.4 13.5 131 215-350 183-338 (360)
135 3mcz_A O-methyltransferase; ad 99.1 3.4E-10 1.2E-14 116.0 11.2 130 216-348 180-336 (352)
136 3uwp_A Histone-lysine N-methyl 99.1 1.4E-10 4.8E-15 122.0 8.4 119 188-318 154-289 (438)
137 3id6_C Fibrillarin-like rRNA/T 99.1 7.7E-10 2.6E-14 108.3 12.8 128 215-350 76-215 (232)
138 2fyt_A Protein arginine N-meth 99.1 3.2E-10 1.1E-14 116.8 10.4 96 216-314 65-168 (340)
139 2b3t_A Protein methyltransfera 99.1 6.4E-10 2.2E-14 110.5 12.2 136 191-346 94-258 (276)
140 1i9g_A Hypothetical protein RV 99.1 5.1E-10 1.7E-14 110.7 11.3 117 216-346 100-225 (280)
141 3mb5_A SAM-dependent methyltra 99.1 4.5E-10 1.5E-14 109.5 10.8 120 215-349 93-220 (255)
142 1fp1_D Isoliquiritigenin 2'-O- 99.1 2.3E-10 7.9E-15 118.7 9.2 129 215-350 209-359 (372)
143 3q7e_A Protein arginine N-meth 99.1 2.9E-10 9.8E-15 117.5 9.8 98 216-315 67-171 (349)
144 3bzb_A Uncharacterized protein 99.1 1.2E-09 4.2E-14 109.2 14.0 129 216-350 80-236 (281)
145 3reo_A (ISO)eugenol O-methyltr 99.1 5.7E-10 2E-14 115.9 11.9 130 214-350 202-354 (368)
146 4dzr_A Protein-(glutamine-N5) 99.1 2.7E-11 9.2E-16 113.8 1.5 136 193-347 15-188 (215)
147 1fp2_A Isoflavone O-methyltran 99.1 4.8E-10 1.6E-14 115.4 11.0 129 215-350 188-340 (352)
148 1jsx_A Glucose-inhibited divis 99.1 4.6E-10 1.6E-14 105.7 10.0 115 216-348 66-185 (207)
149 1vbf_A 231AA long hypothetical 99.1 3.8E-10 1.3E-14 108.2 9.6 109 194-320 57-168 (231)
150 3fzg_A 16S rRNA methylase; met 99.0 1.1E-10 3.9E-15 110.8 5.1 131 216-349 50-186 (200)
151 1o54_A SAM-dependent O-methylt 99.0 1.2E-09 4.2E-14 108.3 12.7 120 216-350 113-238 (277)
152 2ift_A Putative methylase HI07 99.0 2.7E-10 9.1E-15 108.1 7.3 101 216-320 54-166 (201)
153 1ws6_A Methyltransferase; stru 99.0 1.5E-10 5.1E-15 105.1 5.2 121 188-320 20-150 (171)
154 2fhp_A Methylase, putative; al 99.0 2.9E-10 9.9E-15 104.9 7.2 132 177-320 14-157 (187)
155 3p9c_A Caffeic acid O-methyltr 99.0 1.2E-09 4E-14 113.5 11.9 129 215-350 201-352 (364)
156 1g8a_A Fibrillarin-like PRE-rR 99.0 3.5E-09 1.2E-13 101.5 13.7 131 215-350 73-211 (227)
157 2yvl_A TRMI protein, hypotheti 99.0 2.3E-09 7.9E-14 103.6 12.4 114 216-347 92-211 (248)
158 2esr_A Methyltransferase; stru 99.0 4.2E-10 1.4E-14 103.5 6.5 118 192-320 15-141 (177)
159 3r0q_C Probable protein argini 99.0 1E-09 3.4E-14 114.6 10.1 99 215-317 63-169 (376)
160 1g6q_1 HnRNP arginine N-methyl 99.0 1.5E-09 5E-14 111.1 9.9 98 216-315 39-143 (328)
161 3gdh_A Trimethylguanosine synt 98.9 3.9E-11 1.3E-15 116.1 -2.2 96 216-316 79-180 (241)
162 3tfw_A Putative O-methyltransf 98.9 8.9E-09 3.1E-13 100.8 14.6 99 216-318 64-171 (248)
163 2fpo_A Methylase YHHF; structu 98.9 9.4E-10 3.2E-14 104.4 7.4 121 188-319 34-162 (202)
164 1ixk_A Methyltransferase; open 98.9 2.3E-09 8E-14 109.1 10.8 126 216-346 119-270 (315)
165 2yxe_A Protein-L-isoaspartate 98.9 1.8E-09 6.3E-14 102.3 9.3 98 216-320 78-180 (215)
166 3tma_A Methyltransferase; thum 98.9 3.6E-09 1.2E-13 109.0 12.2 122 216-349 204-337 (354)
167 3sso_A Methyltransferase; macr 98.9 3.4E-10 1.2E-14 118.7 4.4 92 216-318 217-325 (419)
168 1zg3_A Isoflavanone 4'-O-methy 98.9 2.2E-09 7.4E-14 110.7 10.3 127 216-349 194-345 (358)
169 3u81_A Catechol O-methyltransf 98.9 1.4E-09 4.8E-14 104.2 8.3 101 216-318 59-171 (221)
170 2plw_A Ribosomal RNA methyltra 98.9 1.8E-09 6E-14 101.2 8.6 91 216-318 23-155 (201)
171 4a6d_A Hydroxyindole O-methylt 98.9 1.4E-08 4.7E-13 104.9 15.8 131 215-350 179-333 (353)
172 3dr5_A Putative O-methyltransf 98.9 2E-09 7E-14 104.0 9.0 97 217-317 58-163 (221)
173 3adn_A Spermidine synthase; am 98.9 3.3E-09 1.1E-13 107.3 10.8 105 215-321 83-202 (294)
174 1dl5_A Protein-L-isoaspartate 98.9 2E-09 6.9E-14 109.4 9.0 97 216-319 76-177 (317)
175 2vdv_E TRNA (guanine-N(7)-)-me 98.9 5E-09 1.7E-13 102.2 11.4 100 216-317 50-173 (246)
176 2igt_A SAM dependent methyltra 98.9 2.9E-09 9.8E-14 109.5 10.0 126 216-346 154-299 (332)
177 1u2z_A Histone-lysine N-methyl 98.9 3E-09 1E-13 113.1 9.7 102 215-318 242-360 (433)
178 2y1w_A Histone-arginine methyl 98.9 3.2E-09 1.1E-13 109.4 9.7 114 193-317 36-155 (348)
179 3tm4_A TRNA (guanine N2-)-meth 98.9 1.6E-08 5.4E-13 105.3 14.6 121 216-350 218-351 (373)
180 3giw_A Protein of unknown func 98.9 3E-09 1E-13 106.6 8.6 103 215-318 78-201 (277)
181 2bm8_A Cephalosporin hydroxyla 98.9 9.4E-10 3.2E-14 107.4 4.8 93 217-318 83-188 (236)
182 1xj5_A Spermidine synthase 1; 98.9 5.9E-09 2E-13 107.3 11.0 106 215-321 120-239 (334)
183 1o9g_A RRNA methyltransferase; 98.9 4.6E-09 1.6E-13 102.5 9.5 104 215-318 51-215 (250)
184 1jg1_A PIMT;, protein-L-isoasp 98.9 4.5E-09 1.5E-13 101.6 9.0 109 194-320 78-192 (235)
185 1i1n_A Protein-L-isoaspartate 98.9 3.5E-09 1.2E-13 101.2 8.1 98 215-319 77-184 (226)
186 1ne2_A Hypothetical protein TA 98.9 1.9E-08 6.4E-13 94.5 12.9 113 215-346 51-165 (200)
187 4azs_A Methyltransferase WBDD; 98.9 8.5E-10 2.9E-14 121.2 4.1 99 215-317 66-173 (569)
188 3a27_A TYW2, uncharacterized p 98.9 9.2E-09 3.2E-13 102.4 11.2 98 215-319 119-221 (272)
189 2pbf_A Protein-L-isoaspartate 98.8 3E-09 1E-13 101.8 7.1 97 216-319 81-195 (227)
190 3ntv_A MW1564 protein; rossman 98.8 3E-09 1E-13 103.0 7.2 98 216-318 72-177 (232)
191 3tr6_A O-methyltransferase; ce 98.8 4.8E-09 1.7E-13 100.1 7.6 99 216-318 65-175 (225)
192 3c3p_A Methyltransferase; NP_9 98.8 3.2E-09 1.1E-13 100.7 6.3 98 216-318 57-161 (210)
193 3duw_A OMT, O-methyltransferas 98.8 6.3E-09 2.1E-13 99.3 8.2 100 216-319 59-169 (223)
194 2oxt_A Nucleoside-2'-O-methylt 98.8 4.5E-09 1.5E-13 104.7 7.5 98 216-318 75-186 (265)
195 3dou_A Ribosomal RNA large sub 98.8 1.8E-08 6E-13 95.2 11.1 92 215-317 25-139 (191)
196 2wa2_A Non-structural protein 98.8 2.3E-09 7.8E-14 107.5 4.9 95 215-319 82-195 (276)
197 1inl_A Spermidine synthase; be 98.8 1.1E-08 3.7E-13 103.4 9.5 103 216-320 91-208 (296)
198 2nyu_A Putative ribosomal RNA 98.8 7E-09 2.4E-13 96.5 7.5 93 216-319 23-147 (196)
199 2b25_A Hypothetical protein; s 98.8 7.9E-09 2.7E-13 105.5 8.6 98 216-319 106-221 (336)
200 2b2c_A Spermidine synthase; be 98.8 8.2E-09 2.8E-13 105.3 8.5 104 216-321 109-226 (314)
201 3lec_A NADB-rossmann superfami 98.8 2.5E-08 8.4E-13 97.5 11.2 120 216-349 22-147 (230)
202 1r18_A Protein-L-isoaspartate( 98.8 5.7E-09 1.9E-13 100.2 6.7 96 216-319 85-196 (227)
203 1iy9_A Spermidine synthase; ro 98.8 1.2E-08 4.1E-13 102.0 9.2 121 215-341 75-209 (275)
204 2o07_A Spermidine synthase; st 98.8 1.4E-08 4.8E-13 103.0 9.6 104 215-320 95-212 (304)
205 2qm3_A Predicted methyltransfe 98.8 6.6E-08 2.3E-12 100.5 14.8 128 216-351 173-309 (373)
206 2yxl_A PH0851 protein, 450AA l 98.8 2.7E-08 9.3E-13 106.2 12.1 126 216-346 260-414 (450)
207 2pt6_A Spermidine synthase; tr 98.8 1E-08 3.5E-13 104.8 8.4 103 216-320 117-233 (321)
208 2i7c_A Spermidine synthase; tr 98.8 1.1E-08 3.7E-13 102.7 8.4 105 215-321 78-196 (283)
209 2gpy_A O-methyltransferase; st 98.8 7.3E-09 2.5E-13 99.7 6.7 97 216-317 55-160 (233)
210 3gnl_A Uncharacterized protein 98.8 2.9E-08 9.9E-13 97.8 11.0 120 216-349 22-147 (244)
211 4hc4_A Protein arginine N-meth 98.8 1.6E-08 5.4E-13 105.7 9.3 96 216-314 84-186 (376)
212 3r3h_A O-methyltransferase, SA 98.7 5.7E-09 2E-13 102.2 5.4 98 216-318 61-171 (242)
213 3b3j_A Histone-arginine methyl 98.7 2.2E-08 7.4E-13 107.9 9.9 96 216-316 159-262 (480)
214 1mjf_A Spermidine synthase; sp 98.7 1.4E-08 4.7E-13 101.7 7.4 100 216-319 76-195 (281)
215 1uir_A Polyamine aminopropyltr 98.7 1.1E-08 3.9E-13 104.0 6.8 101 215-317 77-195 (314)
216 2hnk_A SAM-dependent O-methylt 98.7 2.7E-08 9.1E-13 96.4 9.0 99 216-318 61-182 (239)
217 3kr9_A SAM-dependent methyltra 98.7 6.1E-08 2.1E-12 94.4 11.4 119 216-349 16-141 (225)
218 1sui_A Caffeoyl-COA O-methyltr 98.7 1.5E-08 5.2E-13 99.4 7.1 98 216-317 80-190 (247)
219 3cbg_A O-methyltransferase; cy 98.7 1.4E-08 4.8E-13 98.3 6.8 99 216-318 73-183 (232)
220 3ajd_A Putative methyltransfer 98.7 1.9E-08 6.5E-13 100.1 7.7 105 216-320 84-214 (274)
221 2p41_A Type II methyltransfera 98.7 6.2E-09 2.1E-13 105.8 4.3 99 216-319 83-193 (305)
222 2b78_A Hypothetical protein SM 98.7 5.5E-08 1.9E-12 101.8 11.4 127 216-346 213-357 (385)
223 3k6r_A Putative transferase PH 98.7 1.1E-07 3.7E-12 95.5 12.9 154 174-350 94-256 (278)
224 1wy7_A Hypothetical protein PH 98.7 3E-07 1E-11 86.4 15.3 119 215-349 49-173 (207)
225 3gjy_A Spermidine synthase; AP 98.7 1.9E-08 6.5E-13 102.7 7.5 100 217-318 91-201 (317)
226 2cmg_A Spermidine synthase; tr 98.7 2.1E-08 7.1E-13 99.7 7.5 93 215-319 72-173 (262)
227 2h00_A Methyltransferase 10 do 98.7 1.8E-08 6.1E-13 98.3 6.7 119 193-315 46-190 (254)
228 1nv8_A HEMK protein; class I a 98.7 6E-08 2E-12 97.3 10.7 117 191-319 107-251 (284)
229 3m6w_A RRNA methylase; rRNA me 98.6 3.1E-08 1.1E-12 106.2 7.8 128 215-347 101-255 (464)
230 3lcv_B Sisomicin-gentamicin re 98.6 1.4E-07 4.6E-12 93.7 11.4 129 216-348 133-269 (281)
231 2avd_A Catechol-O-methyltransf 98.6 1.6E-08 5.4E-13 96.7 4.5 99 216-318 70-180 (229)
232 4dmg_A Putative uncharacterize 98.6 1.2E-07 4E-12 99.7 11.2 123 216-344 215-350 (393)
233 1zq9_A Probable dimethyladenos 98.6 6.6E-08 2.3E-12 97.0 8.7 107 194-314 15-144 (285)
234 3c0k_A UPF0064 protein YCCW; P 98.6 1.9E-07 6.6E-12 97.7 12.4 125 216-345 221-364 (396)
235 1wxx_A TT1595, hypothetical pr 98.6 3.8E-08 1.3E-12 102.7 6.8 122 216-343 210-348 (382)
236 3frh_A 16S rRNA methylase; met 98.6 1.5E-07 5E-12 92.5 10.4 129 214-348 104-239 (253)
237 3c3y_A Pfomt, O-methyltransfer 98.6 7.2E-08 2.5E-12 93.8 8.2 98 216-317 71-181 (237)
238 2frx_A Hypothetical protein YE 98.6 1.1E-07 3.7E-12 102.4 10.0 106 215-320 117-249 (479)
239 2yx1_A Hypothetical protein MJ 98.6 3.3E-07 1.1E-11 94.0 13.0 92 216-319 196-293 (336)
240 2f8l_A Hypothetical protein LM 98.6 1.2E-07 4.1E-12 97.3 9.4 123 215-343 130-278 (344)
241 3v97_A Ribosomal RNA large sub 98.6 2.1E-07 7.3E-12 104.6 12.2 120 216-346 540-677 (703)
242 1sqg_A SUN protein, FMU protei 98.6 7.2E-08 2.5E-12 102.2 7.9 126 215-346 246-399 (429)
243 2ih2_A Modification methylase 98.5 9.2E-08 3.1E-12 100.0 7.7 129 193-343 25-186 (421)
244 2as0_A Hypothetical protein PH 98.5 1.1E-07 3.8E-12 99.5 7.9 125 216-345 218-360 (396)
245 2xyq_A Putative 2'-O-methyl tr 98.5 1.3E-07 4.5E-12 95.4 7.5 112 215-349 63-195 (290)
246 3m4x_A NOL1/NOP2/SUN family pr 98.5 1.7E-07 5.7E-12 100.4 7.4 128 215-347 105-259 (456)
247 1uwv_A 23S rRNA (uracil-5-)-me 98.4 1.3E-06 4.6E-11 92.6 13.4 131 193-348 272-411 (433)
248 2h1r_A Dimethyladenosine trans 98.4 7.9E-07 2.7E-11 89.8 10.4 81 194-287 29-114 (299)
249 2qfm_A Spermine synthase; sper 98.3 3.4E-07 1.2E-11 94.9 5.6 104 214-319 187-316 (364)
250 3b5i_A S-adenosyl-L-methionine 98.3 1.9E-06 6.6E-11 89.8 10.2 48 270-318 141-226 (374)
251 1qam_A ERMC' methyltransferase 98.3 2.1E-06 7E-11 84.1 9.5 68 215-286 30-101 (244)
252 2jjq_A Uncharacterized RNA met 98.2 3.5E-06 1.2E-10 89.3 11.2 93 216-317 291-387 (425)
253 2okc_A Type I restriction enzy 98.2 1.3E-06 4.6E-11 92.8 7.7 119 193-320 157-310 (445)
254 1yub_A Ermam, rRNA methyltrans 98.2 4.4E-08 1.5E-12 95.7 -3.5 96 216-317 30-145 (245)
255 3evf_A RNA-directed RNA polyme 98.2 1.1E-05 3.7E-10 80.4 11.8 102 216-319 75-186 (277)
256 2efj_A 3,7-dimethylxanthine me 98.1 5.4E-06 1.8E-10 86.7 9.2 103 216-319 53-227 (384)
257 3gru_A Dimethyladenosine trans 98.1 3E-06 1E-10 85.7 6.8 81 194-287 37-122 (295)
258 3k0b_A Predicted N6-adenine-sp 98.0 2.1E-05 7.2E-10 82.5 11.0 104 216-320 202-353 (393)
259 3ldu_A Putative methylase; str 98.0 2.2E-05 7.5E-10 82.1 10.6 104 216-320 196-347 (385)
260 3ldg_A Putative uncharacterize 97.9 4.2E-05 1.5E-09 80.0 11.8 104 216-320 195-346 (384)
261 3bt7_A TRNA (uracil-5-)-methyl 97.9 7.6E-06 2.6E-10 84.8 5.8 92 217-318 215-327 (369)
262 3tqs_A Ribosomal RNA small sub 97.9 2E-05 6.7E-10 77.9 8.0 81 194-286 16-103 (255)
263 2b9e_A NOL1/NOP2/SUN domain fa 97.9 3.2E-05 1.1E-09 78.5 9.4 103 216-319 103-236 (309)
264 1m6e_X S-adenosyl-L-methionnin 97.9 7.9E-06 2.7E-10 84.7 4.9 103 215-318 51-210 (359)
265 4gqb_A Protein arginine N-meth 97.8 1.5E-05 5.2E-10 88.2 6.6 117 193-314 335-464 (637)
266 3fut_A Dimethyladenosine trans 97.8 2.4E-05 8.4E-10 78.0 7.1 82 194-287 34-118 (271)
267 2ar0_A M.ecoki, type I restric 97.8 1.4E-05 4.9E-10 87.1 5.5 119 194-320 156-315 (541)
268 3o4f_A Spermidine synthase; am 97.7 0.00021 7.1E-09 72.1 12.1 107 214-323 82-204 (294)
269 2dul_A N(2),N(2)-dimethylguano 97.7 2.3E-05 7.7E-10 81.8 4.5 96 216-317 48-164 (378)
270 2qy6_A UPF0209 protein YFCK; s 97.7 3.1E-05 1E-09 76.7 5.2 77 262-350 151-234 (257)
271 3ftd_A Dimethyladenosine trans 97.6 0.00017 5.8E-09 70.8 9.9 74 194-277 18-92 (249)
272 4auk_A Ribosomal RNA large sub 97.6 0.00065 2.2E-08 70.5 14.5 121 215-344 211-333 (375)
273 3uzu_A Ribosomal RNA small sub 97.6 6.6E-05 2.3E-09 75.1 6.7 76 194-277 29-106 (279)
274 3axs_A Probable N(2),N(2)-dime 97.6 4.8E-05 1.6E-09 79.8 5.6 98 216-318 53-159 (392)
275 3v97_A Ribosomal RNA large sub 97.5 0.00028 9.7E-09 79.3 10.7 103 216-318 191-348 (703)
276 3ua3_A Protein arginine N-meth 97.5 4E-05 1.4E-09 85.2 3.5 97 216-314 410-531 (745)
277 3khk_A Type I restriction-modi 97.5 0.00014 4.9E-09 79.3 7.8 119 193-320 231-398 (544)
278 3lkd_A Type I restriction-modi 97.4 0.00051 1.7E-08 74.9 11.4 125 193-321 203-362 (542)
279 2r6z_A UPF0341 protein in RSP 97.4 0.0001 3.5E-09 72.8 4.6 69 216-287 84-169 (258)
280 3gcz_A Polyprotein; flavivirus 97.4 0.00015 5.2E-09 72.3 5.7 100 216-318 91-202 (282)
281 1qyr_A KSGA, high level kasuga 97.4 0.00018 6.2E-09 70.8 6.2 80 194-286 8-97 (252)
282 3eld_A Methyltransferase; flav 97.3 0.00083 2.8E-08 67.4 10.3 102 215-319 81-193 (300)
283 1m6y_A S-adenosyl-methyltransf 97.3 0.00016 5.3E-09 73.2 4.9 71 216-287 27-106 (301)
284 3s1s_A Restriction endonucleas 97.3 0.00044 1.5E-08 78.1 8.5 107 215-321 321-469 (878)
285 3ll7_A Putative methyltransfer 97.2 0.00019 6.5E-09 75.6 3.9 102 216-320 94-212 (410)
286 2wk1_A NOVP; transferase, O-me 97.1 0.0025 8.7E-08 63.7 10.7 135 215-358 106-281 (282)
287 3cvo_A Methyltransferase-like 97.0 0.0033 1.1E-07 59.9 10.9 90 216-315 31-152 (202)
288 2px2_A Genome polyprotein [con 97.0 0.0064 2.2E-07 59.9 12.7 99 215-317 73-183 (269)
289 3c6k_A Spermine synthase; sper 96.7 0.0014 4.9E-08 68.1 5.7 101 215-317 205-331 (381)
290 2oyr_A UPF0341 protein YHIQ; a 96.5 0.00078 2.7E-08 66.6 1.8 90 217-311 90-194 (258)
291 2k4m_A TR8_protein, UPF0146 pr 96.3 0.0021 7.2E-08 58.2 3.6 79 216-316 36-120 (153)
292 4fzv_A Putative methyltransfer 96.3 0.0063 2.2E-07 62.9 7.8 105 215-320 148-287 (359)
293 3ufb_A Type I restriction-modi 96.3 0.016 5.5E-07 62.9 10.8 120 193-320 203-365 (530)
294 3lkz_A Non-structural protein 96.0 0.015 5.2E-07 58.3 8.3 100 216-321 95-208 (321)
295 3p8z_A Mtase, non-structural p 95.5 0.026 8.9E-07 55.0 7.4 100 216-320 79-189 (267)
296 2zig_A TTHA0409, putative modi 95.5 0.019 6.3E-07 57.4 6.6 94 262-359 21-140 (297)
297 2vz8_A Fatty acid synthase; tr 95.1 0.0037 1.3E-07 79.3 -0.2 102 216-318 1241-1349(2512)
298 3vyw_A MNMC2; tRNA wobble urid 94.5 0.061 2.1E-06 54.3 7.2 77 263-351 168-248 (308)
299 1boo_A Protein (N-4 cytosine-s 94.2 0.066 2.3E-06 54.2 6.7 94 263-360 15-125 (323)
300 1wg8_A Predicted S-adenosylmet 93.5 0.12 4.1E-06 51.6 6.9 68 216-286 23-96 (285)
301 2zig_A TTHA0409, putative modi 93.5 0.081 2.8E-06 52.7 5.7 56 192-259 221-276 (297)
302 3r24_A NSP16, 2'-O-methyl tran 92.4 0.16 5.6E-06 50.9 5.9 91 215-318 109-218 (344)
303 1g55_A DNA cytosine methyltran 91.7 0.44 1.5E-05 48.5 8.5 128 217-349 3-147 (343)
304 1g60_A Adenine-specific methyl 90.6 0.3 1E-05 47.5 5.8 51 296-359 53-103 (260)
305 3g7u_A Cytosine-specific methy 90.3 2.7 9.1E-05 43.3 12.9 124 217-345 3-145 (376)
306 1eg2_A Modification methylase 88.0 0.93 3.2E-05 45.7 7.3 79 276-359 55-144 (319)
307 3pvc_A TRNA 5-methylaminomethy 86.6 0.98 3.3E-05 50.1 7.1 61 277-349 169-231 (689)
308 1f8f_A Benzyl alcohol dehydrog 86.3 0.68 2.3E-05 47.1 5.2 93 215-317 190-289 (371)
309 3ps9_A TRNA 5-methylaminomethy 86.1 1.8 6.3E-05 47.6 9.0 61 277-349 177-239 (676)
310 1pl8_A Human sorbitol dehydrog 85.5 1 3.6E-05 45.4 6.2 94 215-317 171-273 (356)
311 3qv2_A 5-cytosine DNA methyltr 85.4 2.5 8.5E-05 42.7 8.9 129 216-350 10-159 (327)
312 2dph_A Formaldehyde dismutase; 85.3 1.1 3.9E-05 45.9 6.4 98 215-317 185-299 (398)
313 3two_A Mannitol dehydrogenase; 84.9 0.84 2.9E-05 45.9 5.1 89 215-317 176-265 (348)
314 2uyo_A Hypothetical protein ML 84.2 7.6 0.00026 38.8 11.7 100 216-319 103-220 (310)
315 1kol_A Formaldehyde dehydrogen 84.1 1.1 3.6E-05 46.1 5.5 99 215-317 185-300 (398)
316 1rjd_A PPM1P, carboxy methyl t 84.0 3.2 0.00011 42.0 8.9 100 216-317 98-232 (334)
317 1e3j_A NADP(H)-dependent ketos 84.0 2.4 8.2E-05 42.6 8.0 94 215-317 168-271 (352)
318 1g60_A Adenine-specific methyl 83.8 1.4 4.7E-05 42.7 5.9 41 216-259 213-253 (260)
319 1pqw_A Polyketide synthase; ro 81.5 1 3.5E-05 41.1 3.8 90 215-317 38-137 (198)
320 4ej6_A Putative zinc-binding d 81.1 4.3 0.00015 41.2 8.7 94 215-318 182-285 (370)
321 3fpc_A NADP-dependent alcohol 80.9 2 6.9E-05 43.2 6.0 93 215-317 166-266 (352)
322 4h0n_A DNMT2; SAH binding, tra 80.8 5.6 0.00019 40.2 9.3 128 217-350 4-148 (333)
323 2km1_A Protein DRE2; yeast, an 80.7 1.2 4.2E-05 39.4 3.8 72 273-360 53-125 (136)
324 1v3u_A Leukotriene B4 12- hydr 80.6 1.8 6.1E-05 43.1 5.5 93 215-317 145-244 (333)
325 3s2e_A Zinc-containing alcohol 79.5 1.1 3.9E-05 44.7 3.6 91 215-317 166-263 (340)
326 2c7p_A Modification methylase 79.2 6.9 0.00024 39.4 9.3 127 216-348 11-150 (327)
327 1uuf_A YAHK, zinc-type alcohol 78.1 0.99 3.4E-05 46.0 2.7 91 215-317 194-288 (369)
328 3uog_A Alcohol dehydrogenase; 78.0 2.1 7.2E-05 43.3 5.1 92 215-317 189-287 (363)
329 1i4w_A Mitochondrial replicati 77.6 1.8 6.1E-05 44.4 4.4 72 194-272 39-116 (353)
330 4dcm_A Ribosomal RNA large sub 77.2 19 0.00065 36.7 12.1 94 217-318 40-137 (375)
331 1rjw_A ADH-HT, alcohol dehydro 75.5 5.5 0.00019 39.7 7.3 91 215-317 164-261 (339)
332 2h6e_A ADH-4, D-arabinose 1-de 75.3 1.6 5.5E-05 43.7 3.3 94 216-317 171-269 (344)
333 3tos_A CALS11; methyltransfera 74.6 9.3 0.00032 37.3 8.5 54 261-317 158-217 (257)
334 2j3h_A NADP-dependent oxidored 73.9 3.2 0.00011 41.3 5.1 93 215-317 155-255 (345)
335 3m6i_A L-arabinitol 4-dehydrog 73.9 9.5 0.00033 38.2 8.7 94 215-317 179-283 (363)
336 1cdo_A Alcohol dehydrogenase; 73.7 3.5 0.00012 41.7 5.5 94 215-317 192-294 (374)
337 2oo3_A Protein involved in cat 73.4 4.4 0.00015 40.3 5.8 98 218-319 94-200 (283)
338 2jhf_A Alcohol dehydrogenase E 73.3 4.5 0.00015 40.9 6.1 94 215-317 191-293 (374)
339 2hcy_A Alcohol dehydrogenase 1 73.3 1.8 6E-05 43.5 3.0 94 215-317 169-269 (347)
340 3dmg_A Probable ribosomal RNA 72.9 2.4 8.1E-05 43.7 3.9 94 217-319 47-141 (381)
341 1p0f_A NADP-dependent alcohol 72.6 4.3 0.00015 41.1 5.7 94 215-317 191-293 (373)
342 3gms_A Putative NADPH:quinone 72.4 2.8 9.6E-05 41.8 4.3 93 214-317 143-243 (340)
343 2fzw_A Alcohol dehydrogenase c 72.0 4.4 0.00015 40.9 5.6 94 215-317 190-292 (373)
344 1jvb_A NAD(H)-dependent alcoho 71.9 2.1 7.3E-05 42.9 3.2 94 215-317 170-271 (347)
345 3me5_A Cytosine-specific methy 71.8 17 0.00058 38.7 10.3 144 197-346 71-255 (482)
346 3uko_A Alcohol dehydrogenase c 71.1 3.9 0.00013 41.5 5.1 94 215-317 193-295 (378)
347 3nx4_A Putative oxidoreductase 70.9 4.7 0.00016 39.7 5.5 90 218-317 149-241 (324)
348 3jv7_A ADH-A; dehydrogenase, n 70.7 4.1 0.00014 40.6 5.1 93 215-317 171-270 (345)
349 4b7c_A Probable oxidoreductase 70.2 3 0.0001 41.5 3.8 92 215-317 149-248 (336)
350 1e3i_A Alcohol dehydrogenase, 70.1 4.7 0.00016 40.8 5.4 94 215-317 195-297 (376)
351 2d8a_A PH0655, probable L-thre 68.6 5.6 0.00019 39.7 5.6 91 215-317 167-267 (348)
352 1yb5_A Quinone oxidoreductase; 67.9 5.4 0.00018 40.1 5.3 90 215-317 170-269 (351)
353 2eih_A Alcohol dehydrogenase; 66.4 6.7 0.00023 39.1 5.6 90 215-317 166-265 (343)
354 3goh_A Alcohol dehydrogenase, 65.6 2.3 8E-05 41.9 2.0 88 214-317 141-229 (315)
355 3ip1_A Alcohol dehydrogenase, 63.9 11 0.00038 38.5 6.8 98 214-318 212-319 (404)
356 3tka_A Ribosomal RNA small sub 63.3 7 0.00024 39.8 4.9 71 215-285 57-134 (347)
357 3qwb_A Probable quinone oxidor 63.2 5.4 0.00019 39.5 4.2 93 214-317 147-247 (334)
358 2b5w_A Glucose dehydrogenase; 63.2 8.8 0.0003 38.5 5.8 88 217-317 174-273 (357)
359 4dvj_A Putative zinc-dependent 62.6 12 0.00041 37.7 6.7 93 215-317 171-270 (363)
360 3jyn_A Quinone oxidoreductase; 62.6 4.4 0.00015 40.1 3.3 93 214-317 139-239 (325)
361 1piw_A Hypothetical zinc-type 62.1 1.7 5.7E-05 44.0 0.1 95 215-317 179-276 (360)
362 3ubt_Y Modification methylase 60.3 68 0.0023 31.3 11.7 128 218-350 2-142 (331)
363 1xa0_A Putative NADPH dependen 60.0 4.8 0.00016 39.8 3.0 90 218-317 152-246 (328)
364 2qrv_A DNA (cytosine-5)-methyl 59.8 9.5 0.00033 37.8 5.2 72 215-286 15-90 (295)
365 2c0c_A Zinc binding alcohol de 59.4 9.7 0.00033 38.3 5.3 92 215-317 163-261 (362)
366 1vj0_A Alcohol dehydrogenase, 59.2 7.3 0.00025 39.5 4.4 94 215-317 195-298 (380)
367 4eye_A Probable oxidoreductase 58.3 7.2 0.00025 38.9 4.0 91 215-317 159-257 (342)
368 1qor_A Quinone oxidoreductase; 57.7 6.2 0.00021 38.9 3.4 92 215-317 140-239 (327)
369 1tt7_A YHFP; alcohol dehydroge 56.9 5.4 0.00018 39.4 2.8 90 218-317 153-247 (330)
370 3fbg_A Putative arginate lyase 56.1 12 0.0004 37.3 5.2 91 215-316 150-247 (346)
371 4eez_A Alcohol dehydrogenase 1 55.8 17 0.00057 36.0 6.3 96 215-318 163-264 (348)
372 1iz0_A Quinone oxidoreductase; 55.4 4.6 0.00016 39.5 2.0 92 215-317 125-218 (302)
373 1wly_A CAAR, 2-haloacrylate re 55.3 9.7 0.00033 37.7 4.4 90 215-317 145-244 (333)
374 2j8z_A Quinone oxidoreductase; 55.2 9.2 0.00031 38.3 4.2 92 215-317 162-261 (354)
375 3gaz_A Alcohol dehydrogenase s 54.4 14 0.00048 36.8 5.5 90 214-317 149-246 (343)
376 3krt_A Crotonyl COA reductase; 51.8 29 0.001 36.0 7.6 93 214-317 227-344 (456)
377 2zb4_A Prostaglandin reductase 50.0 17 0.00058 36.2 5.2 88 217-317 162-260 (357)
378 2cf5_A Atccad5, CAD, cinnamyl 49.3 4 0.00014 41.1 0.4 94 215-317 180-275 (357)
379 2dq4_A L-threonine 3-dehydroge 47.9 9.6 0.00033 37.9 3.0 89 216-317 165-262 (343)
380 1boo_A Protein (N-4 cytosine-s 47.8 23 0.00079 35.2 5.8 41 216-259 253-293 (323)
381 3gqv_A Enoyl reductase; medium 45.7 22 0.00077 35.7 5.4 93 214-317 163-263 (371)
382 4a0s_A Octenoyl-COA reductase/ 45.0 16 0.00056 37.7 4.3 93 214-317 219-336 (447)
383 4a2c_A Galactitol-1-phosphate 44.9 36 0.0012 33.4 6.7 96 214-318 159-261 (346)
384 4dup_A Quinone oxidoreductase; 44.4 18 0.0006 36.2 4.3 93 214-317 166-265 (353)
385 1yqd_A Sinapyl alcohol dehydro 44.1 6.5 0.00022 39.7 1.0 94 215-317 187-282 (366)
386 3iei_A Leucine carboxyl methyl 42.6 2.5E+02 0.0085 28.0 12.5 101 216-318 91-230 (334)
387 3tqh_A Quinone oxidoreductase; 41.6 17 0.00058 35.7 3.6 91 215-317 152-245 (321)
388 3trk_A Nonstructural polyprote 39.2 18 0.0006 35.7 3.1 61 277-342 209-279 (324)
389 3swr_A DNA (cytosine-5)-methyl 38.0 2.5E+02 0.0085 32.5 13.0 131 215-349 539-700 (1002)
390 2cdc_A Glucose dehydrogenase g 37.4 24 0.00082 35.3 4.0 88 216-318 181-279 (366)
391 2py6_A Methyltransferase FKBM; 36.2 36 0.0012 35.0 5.2 33 214-246 225-263 (409)
392 3fwz_A Inner membrane protein 35.5 2E+02 0.0067 24.1 9.9 92 217-317 8-105 (140)
393 1zsy_A Mitochondrial 2-enoyl t 35.5 87 0.003 31.0 7.9 95 215-317 167-270 (357)
394 1eg2_A Modification methylase 34.4 46 0.0016 33.1 5.5 58 192-260 228-287 (319)
395 1tvm_A PTS system, galactitol- 33.9 1.6E+02 0.0055 24.4 8.1 56 217-287 22-77 (113)
396 4gua_A Non-structural polyprot 30.7 50 0.0017 35.9 5.1 68 273-346 216-293 (670)
397 3ius_A Uncharacterized conserv 28.0 2E+02 0.0067 26.8 8.7 65 217-287 6-71 (286)
398 4dkj_A Cytosine-specific methy 28.0 75 0.0026 32.8 5.9 21 216-236 10-30 (403)
399 1whz_A Hypothetical protein; a 27.8 78 0.0027 23.9 4.6 28 331-358 7-34 (70)
400 3nbm_A PTS system, lactose-spe 27.4 1.3E+02 0.0043 25.1 6.2 79 217-318 7-85 (108)
401 2vhw_A Alanine dehydrogenase; 25.6 12 0.00042 38.2 -0.6 99 215-316 167-267 (377)
402 1zcj_A Peroxisomal bifunctiona 25.4 2.5E+02 0.0085 29.1 9.5 91 215-315 36-148 (463)
403 3ggo_A Prephenate dehydrogenas 25.1 2.4E+02 0.0082 27.5 8.9 91 216-314 33-125 (314)
404 2vn8_A Reticulon-4-interacting 25.1 36 0.0012 34.1 2.9 93 215-317 183-280 (375)
405 4ft4_B DNA (cytosine-5)-methyl 22.0 7.9E+02 0.027 27.0 13.4 49 300-350 416-464 (784)
406 1e2b_A Enzyme IIB-cellobiose; 21.6 41 0.0014 27.9 2.0 54 218-287 5-58 (106)
407 3c85_A Putative glutathione-re 21.3 2.2E+02 0.0077 24.7 7.2 94 216-317 39-139 (183)
408 2hwk_A Helicase NSP2; rossman 21.0 41 0.0014 33.5 2.2 40 278-317 205-254 (320)
409 2eez_A Alanine dehydrogenase; 20.8 19 0.00067 36.4 -0.2 99 216-317 166-266 (369)
410 2f1k_A Prephenate dehydrogenas 20.3 3.1E+02 0.011 25.5 8.5 85 218-314 2-88 (279)
411 3ijr_A Oxidoreductase, short c 20.3 1.3E+02 0.0046 28.7 5.8 102 216-317 47-182 (291)
No 1
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.60 E-value=1.3e-15 Score=148.21 Aligned_cols=133 Identities=14% Similarity=0.136 Sum_probs=102.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---CCeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
...+|||||||+|.++..|+.+. ...+.+.|+++.+++.|+++. .++.+...|...+++++++||+|+|.. +++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 169 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQW-TAI 169 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEES-CGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcc-hhh
Confidence 45789999999999999988752 224566688888999888874 357888899989999889999999988 588
Q ss_pred ch--hhhHHHHHHHHHhCCCCeEEEEEeCCCCCC-------ChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 292 WL--QRDGILLLELDRLLRPGGYFVYSSPEAYAH-------DPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 292 ~~--~d~~~~L~ei~RvLkPGG~lvis~P~~~~~-------~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
|. .+...+|.++.++|||||+++++++..... .......-+++.++++++||+++....
T Consensus 170 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 170 YLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 88 457889999999999999999988521100 000011235788999999999886544
No 2
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.60 E-value=7.3e-15 Score=140.00 Aligned_cols=135 Identities=16% Similarity=0.206 Sum_probs=107.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC-CeEEEEeCCCCCCCCCCCceEEEeccccccchh
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~-~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~ 294 (522)
..+|||||||+|.++..|+++ +..+.+.|+++.+++.++++.. ++.+..+|+..++++ ++||+|+|.. +++|.+
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~-~l~~~~ 120 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTY-AFHHLT 120 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEES-CGGGSC
T ss_pred CCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECc-chhcCC
Confidence 468999999999999999987 4577788999999999988865 788999999999988 8999999887 688888
Q ss_pred hhHH--HHHHHHHhCCCCeEEEEEeCCCCCCChh-----------------HHH-----HHHHHHHHHHhcCcEEEEEec
Q 009946 295 RDGI--LLLELDRLLRPGGYFVYSSPEAYAHDPE-----------------NRR-----IWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 295 d~~~--~L~ei~RvLkPGG~lvis~P~~~~~~~e-----------------~~~-----~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+... +|.++.++|||||.+++.++........ ... ..+++.++++++||+++....
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~ 200 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRL 200 (220)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEEC
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeec
Confidence 8866 9999999999999999998653211000 000 125788999999999887766
Q ss_pred ceEEE
Q 009946 351 QTVIW 355 (522)
Q Consensus 351 ~~~iw 355 (522)
....|
T Consensus 201 ~~~~w 205 (220)
T 3hnr_A 201 NHFVW 205 (220)
T ss_dssp SSSEE
T ss_pred cceEE
Confidence 54333
No 3
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.60 E-value=5.4e-16 Score=154.23 Aligned_cols=98 Identities=26% Similarity=0.338 Sum_probs=84.6
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchhhh
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD 296 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d~ 296 (522)
.+|||||||+|.++..|+++ +.++.+.|+++.|++.|++ ..++.+.+++++++|+++++||+|+|+. ++||. +.
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~-~~~v~~~~~~~e~~~~~~~sfD~v~~~~-~~h~~-~~ 114 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR-HPRVTYAVAPAEDTGLPPASVDVAIAAQ-AMHWF-DL 114 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC-CTTEEEEECCTTCCCCCSSCEEEEEECS-CCTTC-CH
T ss_pred CCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh-cCCceeehhhhhhhcccCCcccEEEEee-ehhHh-hH
Confidence 67999999999999999986 3466777889999888764 4678999999999999999999999988 57887 56
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 297 GILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 297 ~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
..++.++.|+|||||.|++.....
T Consensus 115 ~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 115 DRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEEEECCC
Confidence 789999999999999999877543
No 4
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.60 E-value=2e-15 Score=145.34 Aligned_cols=130 Identities=15% Similarity=0.137 Sum_probs=104.0
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC-CeEEEEeCCCCCCCCCCCceEEEeccccccchh
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~-~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~ 294 (522)
..+|||||||+|.++..|+++ +.++.+.|+++.+++.|+++.. ++.+...|+..+ +++++||+|+|.. +++|++
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~-~l~~~~ 117 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTH-VLEHID 117 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTT---CSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEES-CGGGCS
T ss_pred CCcEEEECCCCCHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhh-HHHhhc
Confidence 357999999999999999876 2366777889999999988755 788888898877 4678999999988 699999
Q ss_pred hhHHHHHHHH-HhCCCCeEEEEEeCCCCCCC-----------------hhH-------HHHHHHHHHHHHhcCcEEEEEe
Q 009946 295 RDGILLLELD-RLLRPGGYFVYSSPEAYAHD-----------------PEN-------RRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 295 d~~~~L~ei~-RvLkPGG~lvis~P~~~~~~-----------------~e~-------~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
++..+|+++. |+|||||++++++|+..... ... ....+++.++++++||+++...
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 9999999999 99999999999997642100 000 0123478899999999998765
Q ss_pred c
Q 009946 350 D 350 (522)
Q Consensus 350 ~ 350 (522)
.
T Consensus 198 ~ 198 (250)
T 2p7i_A 198 G 198 (250)
T ss_dssp E
T ss_pred e
Confidence 3
No 5
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.59 E-value=1.1e-14 Score=142.30 Aligned_cols=133 Identities=22% Similarity=0.248 Sum_probs=106.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---CCeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
+..+|||||||+|.++..++++. +..+.+.|+++.+++.|+++. .++.+...|...+++++++||+|++.. +++
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 131 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRD-AIL 131 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEES-CGG
T ss_pred CCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHH-HHH
Confidence 45789999999999999998752 456777789999999999885 568899999999999999999999887 688
Q ss_pred ch--hhhHHHHHHHHHhCCCCeEEEEEeCCCCC---CChhHHH----------HHHHHHHHHHhcCcEEEEEec
Q 009946 292 WL--QRDGILLLELDRLLRPGGYFVYSSPEAYA---HDPENRR----------IWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 292 ~~--~d~~~~L~ei~RvLkPGG~lvis~P~~~~---~~~e~~~----------~~~~l~~l~~~~g~~~v~~~~ 350 (522)
|. .+...+|.++.|+|||||++++.++.... ....... ..+++.++++++||+++....
T Consensus 132 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 132 ALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred hcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 88 88899999999999999999998753211 1111111 134788899999999886553
No 6
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.59 E-value=1.1e-14 Score=143.44 Aligned_cols=151 Identities=21% Similarity=0.311 Sum_probs=111.6
Q ss_pred CccHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--C
Q 009946 189 HDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--P 262 (522)
Q Consensus 189 ~~ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~ 262 (522)
........+.+.+.+.+ ....+|||||||+|.++..++++. +..+.+.|+++.+++.++++ +. +
T Consensus 43 ~~~~~~~~~~l~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~ 112 (273)
T 3bus_A 43 DDATDRLTDEMIALLDV--------RSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANR 112 (273)
T ss_dssp HHHHHHHHHHHHHHSCC--------CTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHHHhcCC--------CCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcc
Confidence 33344455555555542 234789999999999999998752 45667778888888877665 33 5
Q ss_pred eEEEEeCCCCCCCCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCC-hhH---HH-H-------
Q 009946 263 STLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD-PEN---RR-I------- 330 (522)
Q Consensus 263 ~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~-~e~---~~-~------- 330 (522)
+.+...|...+|+++++||+|++.. +++|.++...+|+++.++|||||+++++++...... ... .. .
T Consensus 113 ~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (273)
T 3bus_A 113 VTFSYADAMDLPFEDASFDAVWALE-SLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVL 191 (273)
T ss_dssp EEEEECCTTSCCSCTTCEEEEEEES-CTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCC
T ss_pred eEEEECccccCCCCCCCccEEEEec-hhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCcc
Confidence 8899999999999999999999888 688899999999999999999999999875422111 110 01 0
Q ss_pred ----HHHHHHHHHhcCcEEEEEec
Q 009946 331 ----WNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 331 ----~~~l~~l~~~~g~~~v~~~~ 350 (522)
.+++.++++++||+++....
T Consensus 192 ~~~~~~~~~~~l~~aGf~~~~~~~ 215 (273)
T 3bus_A 192 SLGGIDEYESDVRQAELVVTSTVD 215 (273)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCHHHHHHHHHHcCCeEEEEEE
Confidence 14678889999999886544
No 7
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.58 E-value=1.1e-14 Score=142.80 Aligned_cols=132 Identities=14% Similarity=0.194 Sum_probs=101.5
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
...+|||||||+|.++..|+++. ..+.+.|+++.+++.|+++ + .++.+..+|+..+|+++++||+|+|.. +
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~-~ 112 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRI-A 112 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEES-C
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhh-h
Confidence 34789999999999999998762 2666778888888877665 3 358899999999999999999999888 5
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHH-----------------HHHHHHHHHHHhcCcEEEEEecc
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENR-----------------RIWNAMYDLLKSMCWKIVSKKDQ 351 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~-----------------~~~~~l~~l~~~~g~~~v~~~~~ 351 (522)
++|.+++..+|.++.|+|||||+++++++..... .... ...+++.++++++||+++.....
T Consensus 113 l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 113 AHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN-DAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS-HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred hHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC-HHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 8889999999999999999999999976422110 1000 01236788899999988765543
No 8
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.58 E-value=3.7e-15 Score=140.48 Aligned_cols=131 Identities=14% Similarity=0.092 Sum_probs=106.8
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchh--
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ-- 294 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~-- 294 (522)
.+|||||||+|.++..|+++ +..+.+.|+++.+++.++++..++.+...|+..+++++++||+|++.. +++|.+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~~ 118 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWY-SLIHMGPG 118 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEES-SSTTCCTT
T ss_pred CeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehh-hHhcCCHH
Confidence 57999999999999999987 446777789999999999988889999999999998889999999988 577775
Q ss_pred hhHHHHHHHHHhCCCCeEEEEEeCCCCCCC-------hhHHHHHHHHHHHHHhcCcEEEEEecc
Q 009946 295 RDGILLLELDRLLRPGGYFVYSSPEAYAHD-------PENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (522)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lvis~P~~~~~~-------~e~~~~~~~l~~l~~~~g~~~v~~~~~ 351 (522)
+...+|.++.++|||||+++++.+...... .......+++.++++++||+++.....
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 182 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWD 182 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEec
Confidence 778999999999999999999885432100 000112457889999999999976654
No 9
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.58 E-value=9.5e-15 Score=138.05 Aligned_cols=129 Identities=13% Similarity=0.139 Sum_probs=100.9
Q ss_pred eEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 218 ~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
+|||||||+|.++..|+++ .+..+.+.|+++.+++.|+++ + .++.+...|...+++++++||+|++.. +++
T Consensus 46 ~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~l~ 122 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRG-SVF 122 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEES-CGG
T ss_pred EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECc-hHh
Confidence 8999999999999999876 345666777888888877766 3 368899999999999999999999888 588
Q ss_pred chhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChh-------------------HH--HHHHHHHHHHHhcCcEEEEEe
Q 009946 292 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE-------------------NR--RIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e-------------------~~--~~~~~l~~l~~~~g~~~v~~~ 349 (522)
|.++...+|.++.++|||||.++++++.......+ .. ..-+++.++++++||+.+...
T Consensus 123 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 123 FWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred hccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 88999999999999999999999987532110000 00 112578889999999876544
No 10
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.57 E-value=1e-14 Score=140.83 Aligned_cols=131 Identities=24% Similarity=0.270 Sum_probs=105.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc--CCCeEEEEeCCCCCCCCCCCceEEEeccccccch
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER--GIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r--g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~ 293 (522)
..+|||||||+|.++..++++ +..+.+.|+++.+++.++++ ..++.+...|...+++++++||+|+|.. +++|.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~ 129 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAIN-SLEWT 129 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEES-CTTSS
T ss_pred CCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcC-hHhhc
Confidence 368999999999999999987 45677888999999999887 4578899999999999899999999887 68889
Q ss_pred hhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChh--HH-----------HHHHHHHHHHHhcCcEEEEEec
Q 009946 294 QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE--NR-----------RIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e--~~-----------~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+++..+|.++.++|||||+++++++........ .. ..-.++.++++++||+++....
T Consensus 130 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 199 (242)
T 3l8d_A 130 EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIG 199 (242)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeec
Confidence 999999999999999999999988532211000 00 1123688999999999987543
No 11
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.57 E-value=2.2e-14 Score=143.51 Aligned_cols=150 Identities=16% Similarity=0.120 Sum_probs=110.7
Q ss_pred ccHHHHHHHHHHHh----cCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-
Q 009946 190 DGADKYILALARML----KFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G- 260 (522)
Q Consensus 190 ~ga~~y~~~l~~lL----~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g- 260 (522)
.......+.+.+.+ .+ ....+|||||||+|.++..|+++. +..+.+.|+++.+++.|+++ +
T Consensus 61 ~~~~~~~~~l~~~l~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~ 130 (297)
T 2o57_A 61 EASLRTDEWLASELAMTGVL--------QRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGL 130 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCC--------CTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhhccCC--------CCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCC
Confidence 34445555566655 32 234789999999999999998751 33566667788887777654 3
Q ss_pred -CCeEEEEeCCCCCCCCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCC-Chh-HHH--------
Q 009946 261 -IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH-DPE-NRR-------- 329 (522)
Q Consensus 261 -~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~-~~e-~~~-------- 329 (522)
.++.+..+|...+|+++++||+|++.. +++|.++...+|.++.|+|||||+++++++..... ... ...
T Consensus 131 ~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (297)
T 2o57_A 131 ADNITVKYGSFLEIPCEDNSYDFIWSQD-AFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLH 209 (297)
T ss_dssp TTTEEEEECCTTSCSSCTTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCS
T ss_pred CcceEEEEcCcccCCCCCCCEeEEEecc-hhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCC
Confidence 358999999999999999999999888 58888889999999999999999999987532111 111 111
Q ss_pred ---HHHHHHHHHHhcCcEEEEEec
Q 009946 330 ---IWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 330 ---~~~~l~~l~~~~g~~~v~~~~ 350 (522)
...++.++++++||+++....
T Consensus 210 ~~~~~~~~~~~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 210 DMGSLGLYRSLAKECGLVTLRTFS 233 (297)
T ss_dssp SCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCCHHHHHHHHHHCCCeEEEEEE
Confidence 123677889999999886554
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.56 E-value=3.9e-14 Score=139.63 Aligned_cols=131 Identities=19% Similarity=0.224 Sum_probs=103.2
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
+..+|||||||+|.++..+++. ....+.+.|+++.+++.|+++ + .++.+...|..++++++++||+|+|..
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~- 122 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG- 122 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS-
T ss_pred CCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC-
Confidence 4578999999999999999986 334666777888888777665 3 348999999999999889999999988
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCC--CCChhHHHHH----------HHHHHHHHhcCcEEEEEe
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAY--AHDPENRRIW----------NAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~--~~~~e~~~~~----------~~l~~l~~~~g~~~v~~~ 349 (522)
++++. ++..+++++.++|||||+++++++... .........| .++.++++++||+++...
T Consensus 123 ~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (267)
T 3kkz_A 123 AIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATF 194 (267)
T ss_dssp CGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEE
T ss_pred Cceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 57777 788999999999999999999886421 1223333344 378889999999988543
No 13
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.56 E-value=5.7e-15 Score=143.39 Aligned_cols=128 Identities=18% Similarity=0.222 Sum_probs=99.8
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCC--CCCCCCceEEEeccccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL--PYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~l--pf~d~sFDlVv~s~~~l~~ 292 (522)
+..+|||||||+|.++..+++. +..+.+.|+++.+++.++++ +.+...|..++ ++++++||+|+|.. +++|
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~-~l~~ 113 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISH-FVEH 113 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEES-CGGG
T ss_pred CCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECC-chhh
Confidence 3467999999999999999876 44667778899999998876 77777777665 78889999999888 6888
Q ss_pred hhhh--HHHHHHHHHhCCCCeEEEEEeCCCCCCCh--------h--HHHHHHHHHHHHHhcCcEEEEEe
Q 009946 293 LQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDP--------E--NRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 293 ~~d~--~~~L~ei~RvLkPGG~lvis~P~~~~~~~--------e--~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
.+++ ..+|.++.|+|||||++++.+|....... . ....-+++.++++++||+++...
T Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp SCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 8854 89999999999999999999876421100 0 00012478899999999977544
No 14
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.55 E-value=3.4e-14 Score=138.64 Aligned_cols=134 Identities=16% Similarity=0.216 Sum_probs=106.8
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC--CCeEEEEeCCCCCCCCCCCceEEEeccccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg--~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~ 292 (522)
...+|||||||+|.++..+++... -.+.+.|+++.+++.|+++. .++.+...|+..+++++++||+|+|+. +++|
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~ 120 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSL-ALHY 120 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEES-CGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEch-hhhh
Confidence 457899999999999999988732 16777788999999998874 478999999999999889999999988 6888
Q ss_pred hhhhHHHHHHHHHhCCCCeEEEEEeCCCCC---------CChhH----------------------------HHHHHHHH
Q 009946 293 LQRDGILLLELDRLLRPGGYFVYSSPEAYA---------HDPEN----------------------------RRIWNAMY 335 (522)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvis~P~~~~---------~~~e~----------------------------~~~~~~l~ 335 (522)
.++...+|+++.++|||||.++++++.... ..... ....+++.
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 200 (253)
T 3g5l_A 121 IASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYI 200 (253)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHH
T ss_pred hhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHH
Confidence 999999999999999999999998643110 00000 00346788
Q ss_pred HHHHhcCcEEEEEecc
Q 009946 336 DLLKSMCWKIVSKKDQ 351 (522)
Q Consensus 336 ~l~~~~g~~~v~~~~~ 351 (522)
++++++||+++.....
T Consensus 201 ~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 201 QTLLKNGFQINSVIEP 216 (253)
T ss_dssp HHHHHTTEEEEEEECC
T ss_pred HHHHHcCCeeeeeecC
Confidence 9999999999876553
No 15
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.55 E-value=2.1e-14 Score=139.94 Aligned_cols=145 Identities=14% Similarity=0.124 Sum_probs=106.8
Q ss_pred cHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeE
Q 009946 191 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PST 264 (522)
Q Consensus 191 ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~ 264 (522)
......+.+.+.+.+ .+..+|||||||+|.++..|++.. +..+.+.|+++.+++.|+++ +. ++.
T Consensus 20 ~~~~~~~~l~~~~~~--------~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~ 89 (256)
T 1nkv_A 20 FTEEKYATLGRVLRM--------KPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVH 89 (256)
T ss_dssp CCHHHHHHHHHHTCC--------CTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEE
T ss_pred CCHHHHHHHHHhcCC--------CCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceE
Confidence 445556666666653 234689999999999999998752 34556667777777777654 43 589
Q ss_pred EEEeCCCCCCCCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCC--ChhHH-----------HHH
Q 009946 265 LGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH--DPENR-----------RIW 331 (522)
Q Consensus 265 ~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~--~~e~~-----------~~~ 331 (522)
+..+|+.++++ +++||+|+|.. +++|.++...+|+++.|+|||||++++.++..... ..... ...
T Consensus 90 ~~~~d~~~~~~-~~~fD~V~~~~-~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (256)
T 1nkv_A 90 FIHNDAAGYVA-NEKCDVAACVG-ATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTL 167 (256)
T ss_dssp EEESCCTTCCC-SSCEEEEEEES-CGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCH
T ss_pred EEECChHhCCc-CCCCCEEEECC-ChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCH
Confidence 99999999988 78999999877 58888889999999999999999999987632111 11111 112
Q ss_pred HHHHHHHHhcCcEEEE
Q 009946 332 NAMYDLLKSMCWKIVS 347 (522)
Q Consensus 332 ~~l~~l~~~~g~~~v~ 347 (522)
.++.++++++||+.+.
T Consensus 168 ~~~~~~l~~aGf~~~~ 183 (256)
T 1nkv_A 168 PGLVGAFDDLGYDVVE 183 (256)
T ss_dssp HHHHHHHHTTTBCCCE
T ss_pred HHHHHHHHHCCCeeEE
Confidence 4778889999997654
No 16
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.54 E-value=1e-13 Score=135.22 Aligned_cols=129 Identities=16% Similarity=0.231 Sum_probs=100.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
+..+|||||||+|.++..+++... ..+.+.|+++.+++.|+++ +. ++.+...|...+|+++++||+|+|..
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~- 122 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG- 122 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES-
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC-
Confidence 346899999999999999987621 2566667777777776654 33 38899999999999999999999988
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCC--CChhHHHHH----------HHHHHHHHhcCcEEEE
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA--HDPENRRIW----------NAMYDLLKSMCWKIVS 347 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~--~~~e~~~~~----------~~l~~l~~~~g~~~v~ 347 (522)
+++|. +...+|.++.++|||||+++++++.... ........| .++.++++++||+++.
T Consensus 123 ~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 123 AIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp CSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred hHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 57777 7888999999999999999999864221 222222333 3678899999999886
No 17
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.54 E-value=3.5e-14 Score=134.49 Aligned_cols=129 Identities=15% Similarity=0.171 Sum_probs=101.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC-CCeEEEEeCCCCCCCCCCCceEEEeccccccchh
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg-~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~ 294 (522)
..+|||||||+|.++..|+++ +..+.+.|+++.+++.+++.+ .++.+...|...+ +++++||+|+|+. +++|.+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~-~l~~~~ 121 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAH-WLAHVP 121 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEES-CGGGSC
T ss_pred CCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEec-hhhcCC
Confidence 458999999999999999886 457777889999999998876 5789999998888 7789999999988 688887
Q ss_pred hh--HHHHHHHHHhCCCCeEEEEEeCCCCCCChhH-------------------------HHHHHHHHHHHHhcCcEEEE
Q 009946 295 RD--GILLLELDRLLRPGGYFVYSSPEAYAHDPEN-------------------------RRIWNAMYDLLKSMCWKIVS 347 (522)
Q Consensus 295 d~--~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~-------------------------~~~~~~l~~l~~~~g~~~v~ 347 (522)
+. ..+|+++.++|||||.++++++......... ...-+++.++++++||++..
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 201 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSV 201 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEe
Confidence 75 7899999999999999999875321000000 01235788999999999665
Q ss_pred Ee
Q 009946 348 KK 349 (522)
Q Consensus 348 ~~ 349 (522)
..
T Consensus 202 ~~ 203 (218)
T 3ou2_A 202 DE 203 (218)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 18
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.53 E-value=4.9e-14 Score=134.12 Aligned_cols=134 Identities=19% Similarity=0.191 Sum_probs=102.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
..+|||||||+|.++..+++.......+.+.|+++.+++.++++ + .++.+...|...+++++++||+|+++. ++
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 116 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAF-TF 116 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEES-CG
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeeh-hh
Confidence 46899999999999999886521124566667777777777655 3 358899999999999999999999888 68
Q ss_pred cchhhhHHHHHHHHHhCCCCeEEEEEeCCCCC----CChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 291 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYA----HDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~----~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+|.++...++.++.++|||||.++++++.... .........+++.++++++||+++....
T Consensus 117 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 180 (219)
T 3dh0_A 117 HELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVE 180 (219)
T ss_dssp GGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEe
Confidence 88889999999999999999999998743211 1111111245788999999999887644
No 19
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.52 E-value=6.5e-14 Score=139.35 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=83.5
Q ss_pred CCCeEEEECCCCchHHHHHhhC-CCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCCCCCCCceEEEecc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~-~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lpf~d~sFDlVv~s~ 287 (522)
+..+|||||||+|.++..|+++ ...+..+.+.|+++.|++.|+++ + .++.+..+|+.++|++ .||+|+++.
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~ 147 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNF 147 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeee
Confidence 3468999999999999999875 23456778889999999998876 2 3678999999998875 599999887
Q ss_pred ccccchhhh--HHHHHHHHHhCCCCeEEEEEeC
Q 009946 288 CRIDWLQRD--GILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 288 ~~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P 318 (522)
++||+++. ..+|++++|+|||||.|+++++
T Consensus 148 -~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 148 -TLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp -CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -eeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 68887654 4689999999999999999874
No 20
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.52 E-value=1.1e-13 Score=132.45 Aligned_cols=132 Identities=20% Similarity=0.261 Sum_probs=104.3
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC----C------CeEEEEeCCCCCCCCCCCceEEEe
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG----I------PSTLGVLGTKRLPYPSRSFELAHC 285 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg----~------~~~~~~~d~~~lpf~d~sFDlVv~ 285 (522)
..+|||||||+|.++..++.. +..+.+.|+++.+++.++++. . ++.+...|...+++++++||+|++
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 468999999999999999987 457778888999999888752 2 367888999999998899999998
Q ss_pred ccccccchhhhH---HHHHHHHHhCCCCeEEEEEeCCCCCCChhH--------------------------------HHH
Q 009946 286 SRCRIDWLQRDG---ILLLELDRLLRPGGYFVYSSPEAYAHDPEN--------------------------------RRI 330 (522)
Q Consensus 286 s~~~l~~~~d~~---~~L~ei~RvLkPGG~lvis~P~~~~~~~e~--------------------------------~~~ 330 (522)
+. ++++.+++. .+|+++.++|||||+++++++......... ...
T Consensus 108 ~~-~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3sm3_A 108 QA-FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFT 186 (235)
T ss_dssp ES-CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBC
T ss_pred cc-hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCC
Confidence 87 688887776 899999999999999999875322111100 012
Q ss_pred HHHHHHHHHhcCcEEEEEecc
Q 009946 331 WNAMYDLLKSMCWKIVSKKDQ 351 (522)
Q Consensus 331 ~~~l~~l~~~~g~~~v~~~~~ 351 (522)
.+++.++++++||+++.....
T Consensus 187 ~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 187 EKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp HHHHHHHHHTTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEec
Confidence 357889999999999876653
No 21
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.52 E-value=1e-13 Score=136.09 Aligned_cols=98 Identities=18% Similarity=0.235 Sum_probs=84.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchh-
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ- 294 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~- 294 (522)
..+|||||||+|.++..|+++ +.++.+.|+++.+++.|+++..++.+..+|+..+++ +++||+|+|...+++|+.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~ 126 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAG 126 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCH
T ss_pred CCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCC
Confidence 468999999999999999887 346777889999999999987789999999999888 689999998864588874
Q ss_pred --hhHHHHHHHHHhCCCCeEEEEEe
Q 009946 295 --RDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 295 --d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
+...+|.++.++|||||.|++..
T Consensus 127 ~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 127 QAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 55678999999999999999964
No 22
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.52 E-value=9.2e-14 Score=135.03 Aligned_cols=131 Identities=16% Similarity=0.203 Sum_probs=100.3
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
...+|||||||+|.++..+++.. ..+.+.|+++.+++.++++ + .++.+...|...+++++++||+|+|.. +
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-~ 96 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRY-A 96 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEES-C
T ss_pred CCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECC-c
Confidence 34789999999999999998762 2566667777777776654 3 358889999999999999999999887 5
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHH-----------------HHHHHHHHHHHhcCcEEEEEec
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENR-----------------RIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~-----------------~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
++|..+...+|.++.|+|||||+++++++..... .... ...+++.++++++||+++....
T Consensus 97 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 173 (239)
T 1xxl_A 97 AHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED-PVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQK 173 (239)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS-HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC-hhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEe
Confidence 8888899999999999999999999986532111 1110 0123677888999998775543
No 23
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.52 E-value=4.2e-14 Score=137.28 Aligned_cols=134 Identities=18% Similarity=0.152 Sum_probs=103.5
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC-----CeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI-----PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~-----~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
+..+|||||||+|.++..|+.+. ...+.+.|+++.+++.|+++.. ++.+...|+..+++++++||+|++.. +
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~ 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQW-V 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEES-C
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcc-h
Confidence 45789999999999999988763 3466777888899888887632 36788889988998888999999887 5
Q ss_pred ccchhhh--HHHHHHHHHhCCCCeEEEEEeCCCCC------CChhHHHHHHHHHHHHHhcCcEEEEEecc
Q 009946 290 IDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYA------HDPENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (522)
Q Consensus 290 l~~~~d~--~~~L~ei~RvLkPGG~lvis~P~~~~------~~~e~~~~~~~l~~l~~~~g~~~v~~~~~ 351 (522)
++|.++. ..+|.++.++|||||+++++++.... .........+++.++++++||+++.....
T Consensus 156 l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 156 IGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 8888775 48999999999999999998753211 00001113457889999999998876544
No 24
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.52 E-value=2.5e-14 Score=139.52 Aligned_cols=103 Identities=18% Similarity=0.291 Sum_probs=88.4
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchh
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~ 294 (522)
...+|||||||+|.++..++++. .+..+.+.|+++.+++.++++..++.+...|...++ ++++||+|+++. +++|.+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~~~~ 109 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANA-VFQWVP 109 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEES-CGGGST
T ss_pred CCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeC-chhhCC
Confidence 34679999999999999988651 134566778889999999888778899999999988 778999999887 689999
Q ss_pred hhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 295 RDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
+...+|.++.++|||||++++++|..
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 110 DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 99999999999999999999998754
No 25
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.52 E-value=1.5e-14 Score=137.96 Aligned_cols=130 Identities=10% Similarity=0.009 Sum_probs=94.6
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc-----------------CCCeEEEEeCCCCCCCCC-
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-----------------GIPSTLGVLGTKRLPYPS- 277 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r-----------------g~~~~~~~~d~~~lpf~d- 277 (522)
..+|||+|||+|..+..|+++ +.++.+.|+|+.|++.|+++ ..++.+.++|+.++++++
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 468999999999999999986 55777888999999988776 246889999999999875
Q ss_pred CCceEEEeccccccchhh--hHHHHHHHHHhCCCCeEEEEEeCCCCC---CChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 278 RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYA---HDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 278 ~sFDlVv~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvis~P~~~~---~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
++||+|++.. ++++++. ...+++++.|+|||||++++.+..... ........-+++.++++. ||++.....
T Consensus 100 ~~fD~v~~~~-~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~~ 175 (203)
T 1pjz_A 100 GHCAAFYDRA-AMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVGG 175 (203)
T ss_dssp HSEEEEEEES-CGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEEE
T ss_pred CCEEEEEECc-chhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEecc
Confidence 7999999876 4666643 356999999999999985544321100 000000113467777777 998775443
No 26
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.52 E-value=1.1e-13 Score=133.12 Aligned_cols=103 Identities=16% Similarity=0.260 Sum_probs=86.3
Q ss_pred CCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC---CeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 214 GNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 214 ~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~---~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
.+..+|||||||+|.++..+++.. .+..+.+.|+++.+++.|+++.. ++.+...|...++++ ++||+|+|.. ++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~-~l 119 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSAL-SI 119 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEES-CG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeC-cc
Confidence 345789999999999999998762 24567777889999999888733 688999999999987 8999999987 68
Q ss_pred cchhhhH--HHHHHHHHhCCCCeEEEEEeCC
Q 009946 291 DWLQRDG--ILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 291 ~~~~d~~--~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+|.++.. .+|+++.|+|||||.++++++.
T Consensus 120 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 120 HHLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 8887665 5999999999999999998753
No 27
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.52 E-value=3.1e-14 Score=135.08 Aligned_cols=130 Identities=15% Similarity=0.179 Sum_probs=101.4
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchh-
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ- 294 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~- 294 (522)
..+|||||||+|.++..++++ +..+.+.|+++.+++.++++. ++.+...+...++ ++++||+|+|+. +++|..
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~~~~~ 117 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHA-CLLHVPR 117 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECS-CGGGSCH
T ss_pred CCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecC-chhhcCH
Confidence 468999999999999999987 456777788999999888773 4566778888888 778999999988 577776
Q ss_pred -hhHHHHHHHHHhCCCCeEEEEEeCCCCCCChh------HHHHHHHHHHHHHhcC-cEEEEEecc
Q 009946 295 -RDGILLLELDRLLRPGGYFVYSSPEAYAHDPE------NRRIWNAMYDLLKSMC-WKIVSKKDQ 351 (522)
Q Consensus 295 -d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e------~~~~~~~l~~l~~~~g-~~~v~~~~~ 351 (522)
+...+|+++.++|||||+++++.+........ .....+++.++++++| |+++.....
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 66789999999999999999987643211000 0012457889999999 998876543
No 28
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=8e-14 Score=138.43 Aligned_cols=129 Identities=12% Similarity=0.202 Sum_probs=103.1
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchh
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~ 294 (522)
...+|||||||+|.++..+++. +..+.+.|+++.+++.++++..++.+..+|...+++ +++||+|+++. +++|+.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~-~l~~~~ 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQS---GAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNA-MLHWVK 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEES-CGGGCS
T ss_pred CCCEEEEecCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcc-hhhhCc
Confidence 3468999999999999999874 456777789999999998887778899999999987 47999999887 689999
Q ss_pred hhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHH-----------------------HHHHHHHHHHhcCcEEEEEe
Q 009946 295 RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRR-----------------------IWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~-----------------------~~~~l~~l~~~~g~~~v~~~ 349 (522)
++..+|.++.|+|||||++++..+..... ..... .-+++.++++++||+++...
T Consensus 132 d~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 208 (279)
T 3ccf_A 132 EPEAAIASIHQALKSGGRFVAEFGGKGNI-KYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAA 208 (279)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTTT-HHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecCCcch-HHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEE
Confidence 99999999999999999999988653210 11000 12357788888999877544
No 29
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.51 E-value=1.5e-13 Score=137.17 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=87.2
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
+..+|||||||+|.++..|++....+..+.+.|+++.+++.|+++ +.++.+.+.|+.+++++ ++||+|++.. ++
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~-~l 99 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHA-FL 99 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEES-CG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECC-hh
Confidence 457899999999999999987522235667778888888887765 34688999999999885 6899999888 68
Q ss_pred cchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 291 DWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
++.++...++.++.++|||||++++..|.
T Consensus 100 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 100 LHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 89999999999999999999999999887
No 30
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.50 E-value=6.9e-14 Score=134.83 Aligned_cols=132 Identities=23% Similarity=0.344 Sum_probs=104.8
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
...+|||||||+|.++..++++ +. .+.+.|+++.+++.|+++.. ++.+...|...+++++++||+|++.. +++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 118 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH---GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSL-ALH 118 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT---TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEES-CGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHC---CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEec-ccc
Confidence 3468999999999999999886 33 67777899999999988753 57888899988888889999999888 688
Q ss_pred chhhhHHHHHHHHHhCCCCeEEEEEeCCCC---------CCC-------------------hh-H-------HHHHHHHH
Q 009946 292 WLQRDGILLLELDRLLRPGGYFVYSSPEAY---------AHD-------------------PE-N-------RRIWNAMY 335 (522)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvis~P~~~---------~~~-------------------~e-~-------~~~~~~l~ 335 (522)
|.++...+|+++.++|||||+++++++... ... .. . ....+++.
T Consensus 119 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 198 (243)
T 3bkw_A 119 YVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTL 198 (243)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHH
T ss_pred ccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHH
Confidence 888999999999999999999999875310 000 00 0 01245788
Q ss_pred HHHHhcCcEEEEEec
Q 009946 336 DLLKSMCWKIVSKKD 350 (522)
Q Consensus 336 ~l~~~~g~~~v~~~~ 350 (522)
++++++||+++....
T Consensus 199 ~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 199 NALIRSGFAIEHVEE 213 (243)
T ss_dssp HHHHHTTCEEEEEEE
T ss_pred HHHHHcCCEeeeecc
Confidence 999999999887654
No 31
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.50 E-value=2.4e-13 Score=125.83 Aligned_cols=126 Identities=16% Similarity=0.206 Sum_probs=103.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccch--
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL-- 293 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~-- 293 (522)
..+|||||||+|.++..++.. +.++.+.|+++.+++.++++..++.+...|...+++++++||+|+++..++++.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~ 123 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAE 123 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCH
T ss_pred CCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcCh
Confidence 468999999999999999886 457778889999999999887778999999988888888999999874457776
Q ss_pred hhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 294 QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
++...++.++.++|+|||.+++..+...... .+++.+++++.||+++....
T Consensus 124 ~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~------~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 124 DGREPALANIHRALGADGRAVIGFGAGRGWV------FGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEETTSSCC------HHHHHHHHHHHTEEEEEEES
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcC------HHHHHHHHHHcCCEEeeeec
Confidence 4447899999999999999999886543222 45678889999999886554
No 32
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.50 E-value=5.9e-14 Score=139.64 Aligned_cols=132 Identities=20% Similarity=0.251 Sum_probs=104.4
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCC-CCCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLP-YPSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lp-f~d~sFDlVv~s~~ 288 (522)
..+|||||||+|.++..|++. +..+.+.|+++.+++.|+++ + .++.+..+|...++ +++++||+|+|..
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~- 144 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA- 144 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES-
T ss_pred CCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc-
Confidence 468999999999999999987 45677778888888888765 3 35788999988887 7789999999987
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCC-------------------C------ChhHHHHHHHHHHHHHhcCc
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA-------------------H------DPENRRIWNAMYDLLKSMCW 343 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~-------------------~------~~e~~~~~~~l~~l~~~~g~ 343 (522)
+++|.+++..+|.++.++|||||++++.++.... . ........+++.++++++||
T Consensus 145 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 224 (285)
T 4htf_A 145 VLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGW 224 (285)
T ss_dssp CGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTC
T ss_pred hhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCC
Confidence 6889999999999999999999999998753110 0 00000112478899999999
Q ss_pred EEEEEecc
Q 009946 344 KIVSKKDQ 351 (522)
Q Consensus 344 ~~v~~~~~ 351 (522)
+++.....
T Consensus 225 ~v~~~~~~ 232 (285)
T 4htf_A 225 QIMGKTGV 232 (285)
T ss_dssp EEEEEEEE
T ss_pred ceeeeeeE
Confidence 99877654
No 33
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.50 E-value=1.4e-13 Score=131.38 Aligned_cols=117 Identities=19% Similarity=0.167 Sum_probs=89.0
Q ss_pred cHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC---------
Q 009946 191 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI--------- 261 (522)
Q Consensus 191 ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~--------- 261 (522)
......+.+.+.+.. .+..+|||||||+|.++..|+++. ....+.+.|+++.+++.|+++..
T Consensus 13 ~~~~~~~~l~~~l~~--------~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~ 83 (219)
T 3jwg_A 13 LNQQRLGTVVAVLKS--------VNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQR 83 (219)
T ss_dssp HHHHHHHHHHHHHHH--------TTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHH
T ss_pred chHHHHHHHHHHHhh--------cCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccC
Confidence 334444555555542 234689999999999999998752 12466777888888888877621
Q ss_pred -CeEEEEeCCCCCCCCCCCceEEEeccccccchhhh--HHHHHHHHHhCCCCeEEEEEe
Q 009946 262 -PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 262 -~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvis~ 317 (522)
++.+...|+..+++++++||+|+|.. +++|.+++ ..+++++.++|||||.++++.
T Consensus 84 ~~v~~~~~d~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 84 KRISLFQSSLVYRDKRFSGYDAATVIE-VIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp TTEEEEECCSSSCCGGGTTCSEEEEES-CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cceEEEeCcccccccccCCCCEEEEHH-HHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 68899999988888788999999888 68888765 689999999999999665543
No 34
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=5.7e-14 Score=138.45 Aligned_cols=142 Identities=15% Similarity=0.117 Sum_probs=108.7
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCC
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL 273 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~l 273 (522)
.+.+.+.+.+.. .+..+|||||||+|.++..+++. +..+.+.|+++.+++.++++. ++.+...|...+
T Consensus 21 ~~~~~l~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~~ 88 (261)
T 3ege_A 21 RIVNAIINLLNL--------PKGSVIADIGAGTGGYSVALANQ---GLFVYAVEPSIVMRQQAVVHP-QVEWFTGYAENL 88 (261)
T ss_dssp HHHHHHHHHHCC--------CTTCEEEEETCTTSHHHHHHHTT---TCEEEEECSCHHHHHSSCCCT-TEEEECCCTTSC
T ss_pred HHHHHHHHHhCC--------CCCCEEEEEcCcccHHHHHHHhC---CCEEEEEeCCHHHHHHHHhcc-CCEEEECchhhC
Confidence 456666666652 23478999999999999999874 456777788998888776655 889999999999
Q ss_pred CCCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCC--------CChhHHH-------HHHHHHHHH
Q 009946 274 PYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA--------HDPENRR-------IWNAMYDLL 338 (522)
Q Consensus 274 pf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~--------~~~e~~~-------~~~~l~~l~ 338 (522)
++++++||+|+|.. +++|.++...+++++.|+|| ||++++.++.... ...+... ..+.+. ++
T Consensus 89 ~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l 165 (261)
T 3ege_A 89 ALPDKSVDGVISIL-AIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LL 165 (261)
T ss_dssp CSCTTCBSEEEEES-CGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HH
T ss_pred CCCCCCEeEEEEcc-hHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HH
Confidence 99999999999988 58888999999999999999 9988887754211 1111111 123567 99
Q ss_pred HhcCcEEEEEec
Q 009946 339 KSMCWKIVSKKD 350 (522)
Q Consensus 339 ~~~g~~~v~~~~ 350 (522)
+++||..+....
T Consensus 166 ~~aGF~~v~~~~ 177 (261)
T 3ege_A 166 QENTKRRVEAIP 177 (261)
T ss_dssp HHHHCSEEEEEE
T ss_pred HHcCCCceeEEE
Confidence 999998776544
No 35
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.50 E-value=1e-13 Score=135.26 Aligned_cols=99 Identities=15% Similarity=0.199 Sum_probs=87.2
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
+..+|||||||+|.++..++++ +..+.+.|+++.+++.++++ ..++.+...|...+++++++||+|++.. ++
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 114 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVH-LW 114 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEES-CG
T ss_pred CCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECC-ch
Confidence 3478999999999999999886 45677788899999998877 3578999999999999889999999888 68
Q ss_pred cchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 291 DWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
+|.++...++.++.|+|||||.+++..
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 115 HLVPDWPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp GGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHCCCCcEEEEEe
Confidence 999999999999999999999999873
No 36
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.50 E-value=6.1e-14 Score=146.62 Aligned_cols=135 Identities=19% Similarity=0.142 Sum_probs=104.3
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc---------C----CCeEEEEeCCCCC------CC
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---------G----IPSTLGVLGTKRL------PY 275 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r---------g----~~~~~~~~d~~~l------pf 275 (522)
+..+|||||||+|.++..|++..-.+..+.+.|+++.+++.|+++ | .++.+...|+..+ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 457899999999999998876411234666678888888888765 4 5789999998887 89
Q ss_pred CCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHH--------------HHHHHHHHHHHhc
Q 009946 276 PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENR--------------RIWNAMYDLLKSM 341 (522)
Q Consensus 276 ~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~--------------~~~~~l~~l~~~~ 341 (522)
++++||+|+++. +++|.++...+|.++.|+|||||+|+++++.......... ..++++.++++++
T Consensus 163 ~~~~fD~V~~~~-~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 241 (383)
T 4fsd_A 163 PDSSVDIVISNC-VCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA 241 (383)
T ss_dssp CTTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT
T ss_pred CCCCEEEEEEcc-chhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC
Confidence 999999999887 6889999999999999999999999998753322111111 1126788999999
Q ss_pred CcEEEEEec
Q 009946 342 CWKIVSKKD 350 (522)
Q Consensus 342 g~~~v~~~~ 350 (522)
||+.++...
T Consensus 242 GF~~v~~~~ 250 (383)
T 4fsd_A 242 GFRDVRLVS 250 (383)
T ss_dssp TCCCEEEEE
T ss_pred CCceEEEEe
Confidence 998775544
No 37
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.50 E-value=1.1e-13 Score=140.00 Aligned_cols=135 Identities=15% Similarity=0.107 Sum_probs=103.1
Q ss_pred CCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEecc
Q 009946 214 GNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSR 287 (522)
Q Consensus 214 ~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~ 287 (522)
....+|||||||+|.++..|+++. +..+.+.|+++.+++.|+++ +. ++.+..+|...+++++++||+|++..
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 345789999999999999998751 34556667777777777654 43 58999999999999999999999887
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCC---CChhHHH-----------HHHHHHHHHHhcCcEEEEEecce
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA---HDPENRR-----------IWNAMYDLLKSMCWKIVSKKDQT 352 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~---~~~e~~~-----------~~~~l~~l~~~~g~~~v~~~~~~ 352 (522)
+++|. +...+|.++.|+|||||++++.++.... ....... ..+++.++++++||+++......
T Consensus 194 -~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 194 -STMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp -CGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEECH
T ss_pred -chhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeCC
Confidence 57777 5889999999999999999998853221 1111111 12478889999999998776643
No 38
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.49 E-value=1.4e-13 Score=131.87 Aligned_cols=125 Identities=18% Similarity=0.202 Sum_probs=99.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchhh
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d 295 (522)
..+|||||||+|.++..++.. .+.|+++.+++.++++ ++.+...|...+++++++||+|++.. +++|.++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVT-TICFVDD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEES-CGGGSSC
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcc-hHhhccC
Confidence 367999999999999999875 4447788888888887 57888889989998888999999888 6888889
Q ss_pred hHHHHHHHHHhCCCCeEEEEEeCCCCCCCh---------------hHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 296 DGILLLELDRLLRPGGYFVYSSPEAYAHDP---------------ENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 296 ~~~~L~ei~RvLkPGG~lvis~P~~~~~~~---------------e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+..+|.++.++|+|||.++++++....... ......+++.++++++||+++....
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEec
Confidence 999999999999999999998865321100 0001235788999999999886554
No 39
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.49 E-value=4.1e-13 Score=129.25 Aligned_cols=116 Identities=16% Similarity=0.268 Sum_probs=90.6
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEe
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVL 268 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~ 268 (522)
..+.+.+.+++... ..+..+|||||||+|.++..+++. +.++.+.|+++.+++.|+++ +.++.+...
T Consensus 21 ~~~~~~~~~~l~~~------~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~ 91 (246)
T 1y8c_A 21 KKWSDFIIEKCVEN------NLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ 91 (246)
T ss_dssp HHHHHHHHHHHHTT------TCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC
T ss_pred HHHHHHHHHHHHHh------CCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEec
Confidence 44555566665422 123478999999999999999886 44667778888888877765 347888999
Q ss_pred CCCCCCCCCCCceEEEeccccccch---hhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 269 GTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 269 d~~~lpf~d~sFDlVv~s~~~l~~~---~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
|...++++ ++||+|++...+++|. .+...+|.++.++|||||.+++..+
T Consensus 92 d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 92 DISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99888887 8899999876347777 6678899999999999999999765
No 40
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.48 E-value=9.1e-14 Score=127.22 Aligned_cols=127 Identities=13% Similarity=0.114 Sum_probs=99.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchhh
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d 295 (522)
..+|||||||+|.++..+++.. ..+.+.|+++.+++.++++..++.+...| +++++++||+|+++. +++|.++
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~-~l~~~~~ 90 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFAN-SFHDMDD 90 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEES-CSTTCSC
T ss_pred CCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEcc-chhcccC
Confidence 4689999999999999998863 26777788999999998887778888777 778889999999888 6888889
Q ss_pred hHHHHHHHHHhCCCCeEEEEEeCCCCC----CChhHHHHHHHHHHHHHhcCcEEEEEecc
Q 009946 296 DGILLLELDRLLRPGGYFVYSSPEAYA----HDPENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (522)
Q Consensus 296 ~~~~L~ei~RvLkPGG~lvis~P~~~~----~~~e~~~~~~~l~~l~~~~g~~~v~~~~~ 351 (522)
...+++++.|+|||||++++.++.... ........-+++.++++ ||++++....
T Consensus 91 ~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~ 148 (170)
T 3i9f_A 91 KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP 148 (170)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC
Confidence 999999999999999999998753211 11111112346777777 9999876654
No 41
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.48 E-value=1.7e-13 Score=135.36 Aligned_cols=135 Identities=19% Similarity=0.320 Sum_probs=103.6
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
+..+|||||||+|.++..+++. ..+..+.+.|+++.+++.++++ + .++.+...|...+++++++||+|+++. +
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~ 114 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKN-NPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF-V 114 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEES-C
T ss_pred CCCeEEEecCCCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEec-h
Confidence 4578999999999999999875 1234566667777777777665 3 368889999999999999999999888 6
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCC-----CChhHHHHH-----------------HHHHHHHHhcCcEEEE
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA-----HDPENRRIW-----------------NAMYDLLKSMCWKIVS 347 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~-----~~~e~~~~~-----------------~~l~~l~~~~g~~~v~ 347 (522)
++|.+++..++.++.++|||||++++.++.... ........| .++.++++++||+.+.
T Consensus 115 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~ 194 (276)
T 3mgg_A 115 LEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIR 194 (276)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEE
T ss_pred hhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEE
Confidence 889999999999999999999999998754211 111111122 2577789999999886
Q ss_pred Eecc
Q 009946 348 KKDQ 351 (522)
Q Consensus 348 ~~~~ 351 (522)
....
T Consensus 195 ~~~~ 198 (276)
T 3mgg_A 195 VEPR 198 (276)
T ss_dssp EEEE
T ss_pred EeeE
Confidence 6543
No 42
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.48 E-value=3.2e-13 Score=129.85 Aligned_cols=99 Identities=20% Similarity=0.256 Sum_probs=84.1
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccch--
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL-- 293 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~-- 293 (522)
..+|||||||+|.++..|+++ +..+.+.|+++.+++.|+++..++.+...|...+++ +++||+|+|+..+++|.
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKE---FGDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHH---HSEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCS
T ss_pred CCeEEEecccCCHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCC
Confidence 468999999999999999876 225667788999999999887778999999988887 67899999776568887
Q ss_pred -hhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 294 -QRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 294 -~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
.+...+|.++.++|||||.+++..+
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 4557899999999999999999764
No 43
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.47 E-value=1.4e-13 Score=136.90 Aligned_cols=130 Identities=11% Similarity=0.107 Sum_probs=97.5
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
+..+|||||||+|.++..+++.. +..+.+.|+++.+++.|+++ + .++.+...|..++| ++||+|++..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~- 137 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIG- 137 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEES-
T ss_pred CcCEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeC-
Confidence 34689999999999999998541 34667778888888888765 2 36788888887776 7899999888
Q ss_pred cccch--hhhHHHHHHHHHhCCCCeEEEEEeCCCCCCCh---------h---HH--------------HHHHHHHHHHHh
Q 009946 289 RIDWL--QRDGILLLELDRLLRPGGYFVYSSPEAYAHDP---------E---NR--------------RIWNAMYDLLKS 340 (522)
Q Consensus 289 ~l~~~--~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~---------e---~~--------------~~~~~l~~l~~~ 340 (522)
+++|. .+...+|.++.|+|||||.+++.++....... . .. ...+++.+++++
T Consensus 138 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~ 217 (287)
T 1kpg_A 138 AFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASA 217 (287)
T ss_dssp CGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHT
T ss_pred chhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHh
Confidence 58887 67789999999999999999998754211000 0 00 013477888999
Q ss_pred cCcEEEEEec
Q 009946 341 MCWKIVSKKD 350 (522)
Q Consensus 341 ~g~~~v~~~~ 350 (522)
+||+++....
T Consensus 218 aGf~~~~~~~ 227 (287)
T 1kpg_A 218 NGFTVTRVQS 227 (287)
T ss_dssp TTCEEEEEEE
T ss_pred CCcEEEEEEe
Confidence 9999886554
No 44
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.47 E-value=1.7e-13 Score=138.27 Aligned_cols=134 Identities=19% Similarity=0.117 Sum_probs=101.6
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC----C--CeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG----I--PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg----~--~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
+..+|||||||+|.++..|+.....+..+.+.|+++.+++.|+++. . ++.+..+|+.+++++ ++||+|++..
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~- 195 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG- 195 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS-
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC-
Confidence 3478999999999999998643334557777788888888888762 2 278999999999988 8999999877
Q ss_pred cccchhhhHH---HHHHHHHhCCCCeEEEEEeCCC-------C--C---CChhHH------------------HHHHHHH
Q 009946 289 RIDWLQRDGI---LLLELDRLLRPGGYFVYSSPEA-------Y--A---HDPENR------------------RIWNAMY 335 (522)
Q Consensus 289 ~l~~~~d~~~---~L~ei~RvLkPGG~lvis~P~~-------~--~---~~~e~~------------------~~~~~l~ 335 (522)
+++|.+++.. ++.++.++|||||++++++... . . ...... ...+++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 5777776654 7999999999999999987321 0 0 001000 1245788
Q ss_pred HHHHhcCcEEEEEec
Q 009946 336 DLLKSMCWKIVSKKD 350 (522)
Q Consensus 336 ~l~~~~g~~~v~~~~ 350 (522)
++++++||+++....
T Consensus 276 ~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 276 AQLEEAGFTDLRFED 290 (305)
T ss_dssp HHHHHTTCEEEEEEC
T ss_pred HHHHHCCCEEEEEEc
Confidence 999999999987764
No 45
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.46 E-value=1.2e-13 Score=138.68 Aligned_cols=99 Identities=18% Similarity=0.191 Sum_probs=82.9
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C----CCeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G----IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g----~~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
.+|||||||+|.++..|+++ +..+.+.|+++.+++.|+++ + .++.+..+|+..+++ +++||+|+|+..
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSG 159 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHH
T ss_pred CcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCc
Confidence 47999999999999999987 45667778888888888765 2 468899999999988 588999998766
Q ss_pred cccchhh--hHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 289 RIDWLQR--DGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 289 ~l~~~~d--~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
++++... ...+|+++.++|||||+|++.++.
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 6777653 478999999999999999998754
No 46
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.46 E-value=1.7e-13 Score=132.36 Aligned_cols=129 Identities=17% Similarity=0.099 Sum_probs=99.5
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC------CeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI------PSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~------~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
.+|||||||+|.++..|+.. +..+.+.|+++.+++.|+++.. ++.+..+|+..++ ++++||+|+++. ++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~-~l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYV-FF 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEES-ST
T ss_pred CCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEECh-hh
Confidence 58999999999999999875 5567777888999988887632 3788999988877 446899999887 57
Q ss_pred cchh--hhHHHHHHHHHhCCCCeEEEEEeCCCCCCC--hhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 291 DWLQ--RDGILLLELDRLLRPGGYFVYSSPEAYAHD--PENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 291 ~~~~--d~~~~L~ei~RvLkPGG~lvis~P~~~~~~--~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
++++ +...++.++.++|||||++++......... .......+++.+++++.||+++..+.
T Consensus 143 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 143 CAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp TTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 7776 678899999999999999998764321110 00001235788999999999886554
No 47
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.46 E-value=1.3e-13 Score=130.83 Aligned_cols=129 Identities=19% Similarity=0.227 Sum_probs=99.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCC---CCCC-CCceEEEecccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL---PYPS-RSFELAHCSRCRID 291 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~l---pf~d-~sFDlVv~s~~~l~ 291 (522)
..+|||||||+|.++..+++. +..+.+.|+++.+++.|+++ ....+...+...+ ++.. ++||+|+|+. +++
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~-~l~ 127 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANF-ALL 127 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEES-CCC
T ss_pred CCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECc-hhh
Confidence 378999999999999999887 45777889999999999988 5566777776555 5444 4599999988 466
Q ss_pred chhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChh-----------------------HHHHHHHHHHHHHhcCcEEEEE
Q 009946 292 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE-----------------------NRRIWNAMYDLLKSMCWKIVSK 348 (522)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e-----------------------~~~~~~~l~~l~~~~g~~~v~~ 348 (522)
..+...++.++.++|||||+++++++........ .....+++.++++++||+++..
T Consensus 128 -~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 206 (227)
T 3e8s_A 128 -HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSL 206 (227)
T ss_dssp -SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEE
T ss_pred -hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEE
Confidence 7788999999999999999999998743211100 0013467889999999999875
Q ss_pred ec
Q 009946 349 KD 350 (522)
Q Consensus 349 ~~ 350 (522)
..
T Consensus 207 ~~ 208 (227)
T 3e8s_A 207 QE 208 (227)
T ss_dssp EC
T ss_pred ec
Confidence 54
No 48
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.46 E-value=4.9e-14 Score=141.35 Aligned_cols=131 Identities=10% Similarity=0.063 Sum_probs=88.4
Q ss_pred CCCeEEEECCCCchHHHHHh----hCCCccc--ccCcccccHHHHHHHHHc-----CC-CeEE--EEeCCCCCC------
Q 009946 215 NIRNVLDVGCGVASFGAYLL----SHDIIAM--SLAPNDVHENQIQFALER-----GI-PSTL--GVLGTKRLP------ 274 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La----~~~v~gv--dis~~Dis~a~i~~A~~r-----g~-~~~~--~~~d~~~lp------ 274 (522)
+..+|||||||+|.++..++ .+. ..+ .+.+.|+++.|++.|+++ +. ++.+ ...+.+.++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~-~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQY-PGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHS-TTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhC-CCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 34689999999997665432 221 122 336778888888888765 22 3333 344444433
Q ss_pred CCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhH---------------HHHHHHHHHHHH
Q 009946 275 YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPEN---------------RRIWNAMYDLLK 339 (522)
Q Consensus 275 f~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~---------------~~~~~~l~~l~~ 339 (522)
+++++||+|+|+. ++||++|+..+|++++|+|||||++++..+......... ...-+++.++++
T Consensus 131 ~~~~~fD~V~~~~-~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 131 KELQKWDFIHMIQ-MLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLD 209 (292)
T ss_dssp TCCCCEEEEEEES-CGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHH
T ss_pred cCCCceeEEEEee-eeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHH
Confidence 5678999999988 699999999999999999999999999764321000000 001236778889
Q ss_pred hcCcEEEE
Q 009946 340 SMCWKIVS 347 (522)
Q Consensus 340 ~~g~~~v~ 347 (522)
++||+++.
T Consensus 210 ~aGf~~~~ 217 (292)
T 2aot_A 210 NLGLKYEC 217 (292)
T ss_dssp HHTCCEEE
T ss_pred HCCCceEE
Confidence 99997664
No 49
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.46 E-value=1.6e-14 Score=152.05 Aligned_cols=132 Identities=12% Similarity=0.108 Sum_probs=101.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEE---EEeCCCCCCCCCCCceEEEecccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTL---GVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~---~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
+..+|||||||+|.++..|+++ +..+.+.|+++.+++.|++++.+... ...+...+++++++||+|++.. +++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~-vl~ 182 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAAN-TLC 182 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEES-CGG
T ss_pred CCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECC-hHH
Confidence 3468999999999999999986 44777889999999999988665432 1233455667778999999888 699
Q ss_pred chhhhHHHHHHHHHhCCCCeEEEEEeCCCC-----------CCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 292 WLQRDGILLLELDRLLRPGGYFVYSSPEAY-----------AHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvis~P~~~-----------~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
|++++..+|+++.|+|||||++++.+|... ..........+++..+++++||+++....
T Consensus 183 h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 183 HIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 999999999999999999999999887410 00000111234788999999999886544
No 50
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.45 E-value=3.3e-13 Score=128.71 Aligned_cols=100 Identities=22% Similarity=0.308 Sum_probs=82.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEecccc--
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCR-- 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~-- 289 (522)
..+|||||||+|.++..++.+. ..+.+.|+++.+++.|+++ +.++.+...|...+++++++||+|+++. .
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~~~ 114 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFID-SIV 114 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEES-CGG
T ss_pred CCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcC-chH
Confidence 4689999999999999998762 2666677788887777655 4678999999998888888999999887 4
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+++..+...++.++.++|||||.+++..+.
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 445567788999999999999999998764
No 51
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.45 E-value=9e-13 Score=125.66 Aligned_cols=100 Identities=21% Similarity=0.222 Sum_probs=81.1
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC----C------CeEEEEeCCCCCCCCCCCceEEEe
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG----I------PSTLGVLGTKRLPYPSRSFELAHC 285 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg----~------~~~~~~~d~~~lpf~d~sFDlVv~ 285 (522)
..+|||||||+|.++..|+++. ....+.+.|+++.+++.|+++. . ++.+...|+..+++++++||+|+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 4689999999999999998752 1236667788888888887762 1 688999998888877789999998
Q ss_pred ccccccchhhh--HHHHHHHHHhCCCCeEEEEEe
Q 009946 286 SRCRIDWLQRD--GILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 286 s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvis~ 317 (522)
.. +++|++++ ..+++++.++|||||.++++.
T Consensus 109 ~~-~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 109 IE-VIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ES-CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred HH-HHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 88 68888765 789999999999999776654
No 52
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.44 E-value=1.6e-13 Score=129.91 Aligned_cols=100 Identities=25% Similarity=0.338 Sum_probs=86.4
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchh
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~ 294 (522)
+..+|||||||+|.++..+ .. -.+.+.|+++.+++.++++..++.+...|...+++++++||+|++.. +++|.+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PY----PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFT-TLEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CC----SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEES-CTTTCS
T ss_pred CCCeEEEECCCCCHhHHhC-CC----CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcC-hhhhcC
Confidence 3468999999999999888 22 15566688888999998887778889999999999989999999887 688999
Q ss_pred hhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 295 RDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
++..+|.++.++|||||.+++++++.
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 99999999999999999999998764
No 53
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.44 E-value=6.5e-13 Score=133.47 Aligned_cols=130 Identities=11% Similarity=0.122 Sum_probs=96.3
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
+..+|||||||+|.++..++++. +..+.+.|+++.+++.|+++ +. ++.+...|..++ +++||+|++..
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~- 145 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEY--DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLG- 145 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEES-
T ss_pred CcCEEEEeeccCcHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcc-
Confidence 34689999999999999998761 24566778888888887765 33 478888888776 58999999887
Q ss_pred cccchhhh---------HHHHHHHHHhCCCCeEEEEEeCCCCCCCh----------------h----------HHHHHHH
Q 009946 289 RIDWLQRD---------GILLLELDRLLRPGGYFVYSSPEAYAHDP----------------E----------NRRIWNA 333 (522)
Q Consensus 289 ~l~~~~d~---------~~~L~ei~RvLkPGG~lvis~P~~~~~~~----------------e----------~~~~~~~ 333 (522)
+++|.+++ ..++.++.++|||||++++.++....... . ....-++
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~ 225 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQ 225 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHH
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHH
Confidence 58888554 78999999999999999998753211000 0 0001236
Q ss_pred HHHHHHhcCcEEEEEec
Q 009946 334 MYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 334 l~~l~~~~g~~~v~~~~ 350 (522)
+.++++++||+++....
T Consensus 226 ~~~~l~~aGf~~~~~~~ 242 (302)
T 3hem_A 226 VDYYSSNAGWKVERYHR 242 (302)
T ss_dssp HHHHHHHHTCEEEEEEE
T ss_pred HHHHHHhCCcEEEEEEe
Confidence 78889999998886544
No 54
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.44 E-value=4.3e-13 Score=126.15 Aligned_cols=128 Identities=14% Similarity=0.083 Sum_probs=96.4
Q ss_pred eEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEeccccccch
Q 009946 218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (522)
Q Consensus 218 ~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~ 293 (522)
+|||||||+|.++..+++. +..+.+.|+++.+++.|+++ +.++.+...|+..+++++++||+|+++.. +...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~~~~ 107 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC-HLPS 107 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC-CCCH
T ss_pred CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhh-cCCH
Confidence 8999999999999999876 44677778888888877765 55788899999888888899999998652 2234
Q ss_pred hhhHHHHHHHHHhCCCCeEEEEEeCCCCCC--------ChhHHHHHHHHHHHHHhcCcEEEEEecc
Q 009946 294 QRDGILLLELDRLLRPGGYFVYSSPEAYAH--------DPENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (522)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvis~P~~~~~--------~~e~~~~~~~l~~l~~~~g~~~v~~~~~ 351 (522)
.+...++.++.++|||||++++.++..... .......-+++.++++ ||+++.....
T Consensus 108 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 108 SLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNL 171 (202)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEE
Confidence 566889999999999999999988542110 0011112346777777 9998876544
No 55
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.43 E-value=4.8e-13 Score=127.17 Aligned_cols=100 Identities=22% Similarity=0.364 Sum_probs=85.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---CCeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
+..+|||||||+|.++..|++. +..+.+.|+++.+++.|+++. .++.+...|+..++ ++++||+|+|+. +++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~ 125 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAE-VLY 125 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEES-CGG
T ss_pred CCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEcc-HHH
Confidence 3478999999999999999886 457777788999999988873 35789999998888 678999999987 688
Q ss_pred chhhh---HHHHHHHHHhCCCCeEEEEEeCC
Q 009946 292 WLQRD---GILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 292 ~~~d~---~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
|++++ ..+|.++.++|||||.++++++.
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 88876 46799999999999999998754
No 56
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.43 E-value=3.8e-13 Score=133.17 Aligned_cols=129 Identities=12% Similarity=0.002 Sum_probs=94.5
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC----------------------CCeEEEEeCCCCC
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG----------------------IPSTLGVLGTKRL 273 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg----------------------~~~~~~~~d~~~l 273 (522)
..+|||+|||+|..+..|+++ |.++++.|+++.+++.|+++. .++.+.++|+..+
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 468999999999999999987 557778889999999886542 4678999999999
Q ss_pred CCCC-CCceEEEeccccccchhh--hHHHHHHHHHhCCCCeEEEEEeCC---CCCCChhHHHHHHHHHHHHHhcCcEEEE
Q 009946 274 PYPS-RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPE---AYAHDPENRRIWNAMYDLLKSMCWKIVS 347 (522)
Q Consensus 274 pf~d-~sFDlVv~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvis~P~---~~~~~~e~~~~~~~l~~l~~~~g~~~v~ 347 (522)
++++ ++||+|++.. ++++++. ...++.++.|+|||||+|++++.. .....+.....-+++.+++.. +|+++.
T Consensus 146 ~~~~~~~FD~V~~~~-~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~ 223 (252)
T 2gb4_A 146 PRANIGKFDRIWDRG-ALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQC 223 (252)
T ss_dssp GGGCCCCEEEEEESS-STTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEE
T ss_pred CcccCCCEEEEEEhh-hhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEE
Confidence 8764 8999999876 4666543 357999999999999999754311 000000000113567777776 588876
Q ss_pred Ee
Q 009946 348 KK 349 (522)
Q Consensus 348 ~~ 349 (522)
..
T Consensus 224 ~~ 225 (252)
T 2gb4_A 224 LE 225 (252)
T ss_dssp EE
T ss_pred Ee
Confidence 55
No 57
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.43 E-value=4.3e-13 Score=127.54 Aligned_cols=131 Identities=15% Similarity=0.231 Sum_probs=102.9
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCC--CCCCCCCceEEEeccccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR--LPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~--lpf~d~sFDlVv~s~~~l~~ 292 (522)
+..+|||||||+|.++..+++. +..+.+.|+++.+++.++++.. .+...|... +++++++||+|+++. +++|
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~-~l~~ 105 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGD-VLEH 105 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEES-CGGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECC-hhhh
Confidence 3478999999999999999886 3677888999999998887643 667778765 677788999999887 6888
Q ss_pred hhhhHHHHHHHHHhCCCCeEEEEEeCCCCC-------------CCh--------hHHHHHHHHHHHHHhcCcEEEEEecc
Q 009946 293 LQRDGILLLELDRLLRPGGYFVYSSPEAYA-------------HDP--------ENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (522)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvis~P~~~~-------------~~~--------e~~~~~~~l~~l~~~~g~~~v~~~~~ 351 (522)
.+++..++.++.++|+|||++++++|.... ... ......+++.++++++||+++.....
T Consensus 106 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 106 LFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp SSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEec
Confidence 889999999999999999999999875311 000 00012457889999999998876553
No 58
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.40 E-value=8.1e-13 Score=132.60 Aligned_cols=100 Identities=12% Similarity=0.133 Sum_probs=84.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc-------CCCeEEEEeCCCCCCCCC------CCce
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-------GIPSTLGVLGTKRLPYPS------RSFE 281 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r-------g~~~~~~~~d~~~lpf~d------~sFD 281 (522)
+..+|||||||+|.++..|++..-.+..+.+.|+++.+++.|+++ ..++.+.+.|+..+++++ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 357899999999999999995211245667778888888888765 457899999999998877 8999
Q ss_pred EEEeccccccchhhhHHHHHHHHHhCCCCeEEEEE
Q 009946 282 LAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYS 316 (522)
Q Consensus 282 lVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis 316 (522)
+|+|+. ++||. +...++.++.|+|||||.|++.
T Consensus 116 ~V~~~~-~l~~~-~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 116 MITAVE-CAHWF-DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEES-CGGGS-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeHhh-HHHHh-CHHHHHHHHHHhcCCCcEEEEE
Confidence 999988 58888 9999999999999999999984
No 59
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.40 E-value=2.6e-13 Score=135.17 Aligned_cols=116 Identities=21% Similarity=0.338 Sum_probs=91.7
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---------CCe
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---------IPS 263 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---------~~~ 263 (522)
..+.+.+.+.+... +..+|||||||+|.++..|++. +..+.+.|+++.+++.|+++. .++
T Consensus 43 ~~~~~~l~~~l~~~--------~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 43 AEYKAWLLGLLRQH--------GCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp HHHHHHHHHHHHHT--------TCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTC
T ss_pred HHHHHHHHHHhccc--------CCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhccccccccee
Confidence 44555555555422 2468999999999999999987 346777788888888886541 356
Q ss_pred EEEEeCCCCCC---CCCCCceEEEeccccccchhh-------hHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 264 TLGVLGTKRLP---YPSRSFELAHCSRCRIDWLQR-------DGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 264 ~~~~~d~~~lp---f~d~sFDlVv~s~~~l~~~~d-------~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
.+...+...++ +++++||+|+|...+++|+.+ ...+|+++.++|||||++++..|+
T Consensus 112 ~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 112 VIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 77888888887 788999999997236888888 788999999999999999998865
No 60
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.40 E-value=4.2e-13 Score=131.00 Aligned_cols=143 Identities=15% Similarity=0.040 Sum_probs=97.0
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEe
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVL 268 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~ 268 (522)
..+.+.+++.+. ..+.+|||||||+|.++.+++++. +-+++++|+++.+++.|+++ +.++.+..+
T Consensus 47 ~~~m~~~a~~~~---------~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~ 115 (236)
T 3orh_A 47 TPYMHALAAAAS---------SKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG 115 (236)
T ss_dssp HHHHHHHHHHHT---------TTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES
T ss_pred HHHHHHHHHhhc---------cCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEee
Confidence 445566666664 235789999999999999998763 23556668888888888775 445677777
Q ss_pred CCCCC--CCCCCCceEEEe----ccccccchhhhHHHHHHHHHhCCCCeEEEEEeCC------CCCCChhHHHHHHHHHH
Q 009946 269 GTKRL--PYPSRSFELAHC----SRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE------AYAHDPENRRIWNAMYD 336 (522)
Q Consensus 269 d~~~l--pf~d~sFDlVv~----s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~------~~~~~~e~~~~~~~l~~ 336 (522)
+.+.+ ++++++||.|++ ....+++..+...++.++.|+|||||.|++.... ...+.......-+....
T Consensus 116 ~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (236)
T 3orh_A 116 LWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVP 195 (236)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHH
T ss_pred hHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHH
Confidence 75543 577889999974 1224566778899999999999999999985411 00111111112234455
Q ss_pred HHHhcCcEEE
Q 009946 337 LLKSMCWKIV 346 (522)
Q Consensus 337 l~~~~g~~~v 346 (522)
.+.++||+..
T Consensus 196 ~L~eaGF~~~ 205 (236)
T 3orh_A 196 ALLEAGFRRE 205 (236)
T ss_dssp HHHHHTCCGG
T ss_pred HHHHcCCeEE
Confidence 6778899754
No 61
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.39 E-value=5.4e-13 Score=131.20 Aligned_cols=101 Identities=21% Similarity=0.388 Sum_probs=86.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchhh
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d 295 (522)
..+|||||||+|.++..|++. +.++.+.|+++.+++.|+++... .+...|...+++++++||+|++....+|+..+
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 468999999999999999886 45777889999999999888653 37888999999988999999988755666678
Q ss_pred hHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 296 DGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 296 ~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
...+|.++.++|||||.+++.+++.
T Consensus 131 ~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 131 KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 8999999999999999999988764
No 62
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.39 E-value=1.2e-12 Score=129.95 Aligned_cols=134 Identities=22% Similarity=0.242 Sum_probs=100.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCCC-CCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPY-PSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lpf-~d~sFDlVv~s~~ 288 (522)
..+|||||||+|.++..++... ...+.+.|+++.+++.|+++ + .++.+..+|...+++ ++++||+|+|..
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~- 141 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF- 141 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES-
T ss_pred CCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc-
Confidence 4689999999999998887652 22566667888888887765 2 246888899988888 678999999887
Q ss_pred cccc----hhhhHHHHHHHHHhCCCCeEEEEEeCCCCC-----------------------CCh----------------
Q 009946 289 RIDW----LQRDGILLLELDRLLRPGGYFVYSSPEAYA-----------------------HDP---------------- 325 (522)
Q Consensus 289 ~l~~----~~d~~~~L~ei~RvLkPGG~lvis~P~~~~-----------------------~~~---------------- 325 (522)
++|| ..+...+|.++.++|||||++++.+|.... ..+
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 221 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVN 221 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCS
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhc
Confidence 4665 566788999999999999999998865210 000
Q ss_pred ---hHHHHHHHHHHHHHhcCcEEEEEecce
Q 009946 326 ---ENRRIWNAMYDLLKSMCWKIVSKKDQT 352 (522)
Q Consensus 326 ---e~~~~~~~l~~l~~~~g~~~v~~~~~~ 352 (522)
......+++.++++++||+++......
T Consensus 222 ~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 222 NCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp SEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred CCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 000123688999999999999876654
No 63
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.39 E-value=6.9e-13 Score=134.11 Aligned_cols=100 Identities=10% Similarity=0.094 Sum_probs=81.8
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
+..+|||||||+|.++..+++.. +..+.+.|+++.+++.|+++ + .++.+...|..+++ ++||+|++..
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~- 163 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIE- 163 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEES-
T ss_pred CcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeC-
Confidence 34689999999999999998752 34667778888888888766 3 24788888887775 6899999888
Q ss_pred cccch--hhhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 289 RIDWL--QRDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 289 ~l~~~--~d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
+++|. ++...+|.++.++|||||++++.++..
T Consensus 164 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 164 AFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp CGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred hHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 58888 677899999999999999999988653
No 64
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.38 E-value=1.5e-12 Score=120.94 Aligned_cols=102 Identities=18% Similarity=0.113 Sum_probs=74.4
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEeCCCCCC-CCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVLGTKRLP-YPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~d~~~lp-f~d~sFDlVv~s~~ 288 (522)
...+|||+|||+|.++..|+++ +..+.+.|+++.+++.|+++ + .++.+...+...++ +.+++||+|+++..
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 3468999999999999999986 45666667788887777654 3 45777776666643 45688999987632
Q ss_pred cccc--------hhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 289 RIDW--------LQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 289 ~l~~--------~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
.+++ ..+...++.++.++|||||+++++...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 2332 234457899999999999999998743
No 65
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.38 E-value=2.8e-12 Score=128.99 Aligned_cols=135 Identities=16% Similarity=0.175 Sum_probs=95.6
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC----------------------------------
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---------------------------------- 260 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---------------------------------- 260 (522)
...+|||||||+|.++..|+.+. -+..+.+.|+++.+++.|+++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 35789999999999999998751 2346667788888888887651
Q ss_pred -----------------------------CCeEEEEeCCCCCC-----CCCCCceEEEeccccccchh------hhHHHH
Q 009946 261 -----------------------------IPSTLGVLGTKRLP-----YPSRSFELAHCSRCRIDWLQ------RDGILL 300 (522)
Q Consensus 261 -----------------------------~~~~~~~~d~~~lp-----f~d~sFDlVv~s~~~l~~~~------d~~~~L 300 (522)
.++.+..+|....+ +.+++||+|+|.. +++|+. +...+|
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~-vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLS-LTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEES-CHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEECh-HHHHhhhcCCHHHHHHHH
Confidence 25778888866543 5678999999987 576653 557899
Q ss_pred HHHHHhCCCCeEEEEEeCCCCC-----C-ChhHHHHHH-------HHHHHHHh--cCcEEEEEecc
Q 009946 301 LELDRLLRPGGYFVYSSPEAYA-----H-DPENRRIWN-------AMYDLLKS--MCWKIVSKKDQ 351 (522)
Q Consensus 301 ~ei~RvLkPGG~lvis~P~~~~-----~-~~e~~~~~~-------~l~~l~~~--~g~~~v~~~~~ 351 (522)
++++++|||||+|++...+... . ..+....+. ++..++.+ +||+.++....
T Consensus 204 ~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 9999999999999997653210 1 111111221 67788888 99977765543
No 66
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.37 E-value=2.2e-12 Score=127.11 Aligned_cols=164 Identities=10% Similarity=0.076 Sum_probs=106.2
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCC--CCCCCceEEEec
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLP--YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lp--f~d~sFDlVv~s 286 (522)
+..+|||+|||+|.++..++++.. ..+.+.|+++.+++.|+++ +. ++.+...|+.+++ +++++||+|+++
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 347899999999999999987621 1566667777777777654 33 4888888887765 557899999985
Q ss_pred cccccc-------------------hhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q 009946 287 RCRIDW-------------------LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 347 (522)
Q Consensus 287 ~~~l~~-------------------~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~ 347 (522)
...+.. ..+...++.++.++|||||+++++.+... ..++..++++.||....
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER---------LLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT---------HHHHHHHHHHTTEEEEE
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH---------HHHHHHHHHHCCCceEE
Confidence 321111 12346799999999999999999876532 45677788899998876
Q ss_pred EecceEEEeccCCcccccccCCCC-----CCCCCCCCCCCCc-ccccc
Q 009946 348 KKDQTVIWAKPISNSCYLKRVPGS-----RPPLCSSDDDPDV-TWNVL 389 (522)
Q Consensus 348 ~~~~~~iw~Kp~~~~c~~~r~~~~-----~p~lC~~~~~~d~-~wY~~ 389 (522)
.........++........++..+ .|+|+..+.+..+ .+|..
T Consensus 198 ~~~v~~~~~~~~~~~l~~~~k~~~~~~~~~~~l~i~~~~g~yt~~~~~ 245 (259)
T 3lpm_A 198 IQFVHPRSDREANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPVIKE 245 (259)
T ss_dssp EEEEESSTTSCCSEEEEEEEETCCSCCEEEEEEECBCTTSSBCHHHHH
T ss_pred EEEeecCCCCCcEEEEEEEEeCCCCCCeecCCEEEECCCCCcCHHHHH
Confidence 544322222333333333333221 2445554444444 44443
No 67
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.36 E-value=1.4e-12 Score=123.99 Aligned_cols=111 Identities=21% Similarity=0.268 Sum_probs=89.0
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchhh
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d 295 (522)
..+|||||||+|.++..++ ..++++|+++. ++.+...|...+++++++||+|+++. ++|+ .+
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~-~~ 129 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCL-SLMG-TN 129 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEES-CCCS-SC
T ss_pred CCeEEEECCcCCHHHHHhh-ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEeh-hccc-cC
Confidence 4679999999999999885 46777777654 45677888888999889999999988 4665 78
Q ss_pred hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 296 DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 296 ~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
...+|.++.++|+|||.++++++..... ..+++.++++++||+++....
T Consensus 130 ~~~~l~~~~~~L~~gG~l~i~~~~~~~~------~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 130 IRDFLEEANRVLKPGGLLKVAEVSSRFE------DVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECGGGCS------CHHHHHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHHHHhCCCCeEEEEEEcCCCCC------CHHHHHHHHHHCCCEEEEEec
Confidence 8899999999999999999987643211 245688889999999887543
No 68
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.36 E-value=1.5e-12 Score=136.54 Aligned_cols=103 Identities=16% Similarity=0.141 Sum_probs=84.1
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
...+|||+|||+|.++..++++ +..+.+.|+++.+++.|+++ +.++.+...|....+.++++||+|+|+. .+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~np-p~ 308 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNP-PF 308 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECC-CC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECC-ch
Confidence 3468999999999999999986 34666777788887777654 5578899999988887778999999876 46
Q ss_pred cc-----hhhhHHHHHHHHHhCCCCeEEEEEeCCCC
Q 009946 291 DW-----LQRDGILLLELDRLLRPGGYFVYSSPEAY 321 (522)
Q Consensus 291 ~~-----~~d~~~~L~ei~RvLkPGG~lvis~P~~~ 321 (522)
|+ ..+...++.++.++|||||.++++.+...
T Consensus 309 ~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 309 HVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred hhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 65 45567899999999999999999987654
No 69
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.36 E-value=2.1e-12 Score=124.44 Aligned_cols=118 Identities=21% Similarity=0.316 Sum_probs=95.5
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCC-CCCCCC-CCCceEEEeccccccch
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT-KRLPYP-SRSFELAHCSRCRIDWL 293 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~-~~lpf~-d~sFDlVv~s~~~l~~~ 293 (522)
..+|||||||+|.++..|++. +..+.+.|+++.+++.++++..++.+...|. ..+|++ +++||+|+++
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------- 118 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------- 118 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-------
T ss_pred CCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-------
Confidence 468999999999999999987 4577788999999999998877899999998 678888 8999999976
Q ss_pred hhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecce
Q 009946 294 QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQT 352 (522)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~~~ 352 (522)
.+...++.++.++|||||.++....... .+.+.+.+++.||.........
T Consensus 119 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------~~~~~~~l~~~Gf~~~~~~~~~ 168 (226)
T 3m33_A 119 RGPTSVILRLPELAAPDAHFLYVGPRLN---------VPEVPERLAAVGWDIVAEDHVS 168 (226)
T ss_dssp SCCSGGGGGHHHHEEEEEEEEEEESSSC---------CTHHHHHHHHTTCEEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCcEEEEeCCcCC---------HHHHHHHHHHCCCeEEEEEeee
Confidence 2456789999999999999993322111 2357788899999988765543
No 70
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.36 E-value=3.4e-12 Score=127.44 Aligned_cols=133 Identities=14% Similarity=0.089 Sum_probs=89.7
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC---------------------------------
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI--------------------------------- 261 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~--------------------------------- 261 (522)
...+|||||||+|.++..++.. .+..+.+.|+++.+++.|+++..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 3478999999999955444332 12356666778888877765310
Q ss_pred --CeEEEEeCCCC-CCC-----CCCCceEEEeccccccc----hhhhHHHHHHHHHhCCCCeEEEEEeCC--CC-CCCh-
Q 009946 262 --PSTLGVLGTKR-LPY-----PSRSFELAHCSRCRIDW----LQRDGILLLELDRLLRPGGYFVYSSPE--AY-AHDP- 325 (522)
Q Consensus 262 --~~~~~~~d~~~-lpf-----~d~sFDlVv~s~~~l~~----~~d~~~~L~ei~RvLkPGG~lvis~P~--~~-~~~~- 325 (522)
...+..+|+.. +|+ ++++||+|+|+. +++| .++...+|.++.|+|||||+|+++... .+ ....
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~ 227 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAF-CLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEA 227 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEES-CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehh-hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCe
Confidence 03455667766 664 346799999988 5888 667889999999999999999997421 10 0000
Q ss_pred ---hHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 326 ---ENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 326 ---e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
.....-+++.++++++||+++....
T Consensus 228 ~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 255 (289)
T 2g72_A 228 RLTVVPVSEEEVREALVRSGYKVRDLRT 255 (289)
T ss_dssp EEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred eeeeccCCHHHHHHHHHHcCCeEEEeeE
Confidence 0001235788899999999886553
No 71
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.35 E-value=3.8e-12 Score=119.91 Aligned_cols=102 Identities=22% Similarity=0.327 Sum_probs=83.2
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---CCeEEEEeCCCCCCCCCCCceEEEeccccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~ 292 (522)
..+|||||||+|.++..+++.... .+.+.|+++.+++.++++. .++.+...|...+++++++||+|++.. .+++
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~-~~~~ 119 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKG-TLDA 119 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEES-HHHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECc-chhh
Confidence 367999999999999999876321 5667788888888888774 467889999998998889999999876 3443
Q ss_pred h---------------hhhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 293 L---------------QRDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 293 ~---------------~d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
. .+...+|.++.++|||||.+++.++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 3 355789999999999999999998654
No 72
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.34 E-value=2.4e-12 Score=121.33 Aligned_cols=99 Identities=17% Similarity=0.215 Sum_probs=79.4
Q ss_pred CCeEEEECCCCchHH-HHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 216 IRNVLDVGCGVASFG-AYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a-~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
..+|||+|||+|.++ ..++.. +.++.+.|+++.+++.|+++ +.++.+...|+..+++++++||+|++.. ++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 99 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVED---GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYG-TI 99 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHT---TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECS-CG
T ss_pred CCEEEEECCCCCHHHHHHHHhC---CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcC-hH
Confidence 468999999999874 444443 34566667777777776654 5678889999999999889999999887 57
Q ss_pred cch--hhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 291 DWL--QRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 291 ~~~--~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
+|. .+...++.++.++|||||.+++.++
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 777 6778899999999999999999874
No 73
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.34 E-value=1.6e-12 Score=126.02 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEE
Q 009946 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGV 267 (522)
Q Consensus 192 a~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~ 267 (522)
...+.+.+.+.+. ....+|||||||+|.++..|++.. ...+.+.|+++.+++.|+++ +.++.+..
T Consensus 46 ~~~~~~~l~~~~~---------~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~ 114 (236)
T 1zx0_A 46 ETPYMHALAAAAS---------SKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLK 114 (236)
T ss_dssp GHHHHHHHHHHHT---------TTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEE
T ss_pred HHHHHHHHHhhcC---------CCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEe
Confidence 3455555555542 234689999999999999997652 22566778888898888776 35678888
Q ss_pred eCCCCC--CCCCCCceEEEe-cccc-cc--chhhhHHHHHHHHHhCCCCeEEEEEeCCCC-----CCChhHHHHH-HHHH
Q 009946 268 LGTKRL--PYPSRSFELAHC-SRCR-ID--WLQRDGILLLELDRLLRPGGYFVYSSPEAY-----AHDPENRRIW-NAMY 335 (522)
Q Consensus 268 ~d~~~l--pf~d~sFDlVv~-s~~~-l~--~~~d~~~~L~ei~RvLkPGG~lvis~P~~~-----~~~~e~~~~~-~~l~ 335 (522)
+|..++ ++++++||+|++ .... .+ +..+...++.++.|+|||||+|++.....+ .........+ +...
T Consensus 115 ~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (236)
T 1zx0_A 115 GLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQV 194 (236)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTH
T ss_pred cCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHH
Confidence 888887 888899999998 4421 11 123345789999999999999998653210 0001111112 2345
Q ss_pred HHHHhcCcEE
Q 009946 336 DLLKSMCWKI 345 (522)
Q Consensus 336 ~l~~~~g~~~ 345 (522)
..+.+.||..
T Consensus 195 ~~l~~aGF~~ 204 (236)
T 1zx0_A 195 PALLEAGFRR 204 (236)
T ss_dssp HHHHHTTCCG
T ss_pred HHHHHCCCCC
Confidence 5678899964
No 74
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.34 E-value=4e-12 Score=118.49 Aligned_cols=129 Identities=17% Similarity=0.285 Sum_probs=94.1
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
..+|||||||+|.++..+++. +..+.+.|+++.+++.++++ +. ++.+...|...+++ +++||+|+++. ++
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~-~l 107 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTV-VL 107 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEES-CG
T ss_pred CCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcc-hh
Confidence 368999999999999999876 34666667777777776654 43 68889999888888 78999999888 57
Q ss_pred cchh--hhHHHHHHHHHhCCCCeEEEEEeCC---CCCCChhH--HHHHHHHHHHHHhcCcEEEEEecc
Q 009946 291 DWLQ--RDGILLLELDRLLRPGGYFVYSSPE---AYAHDPEN--RRIWNAMYDLLKSMCWKIVSKKDQ 351 (522)
Q Consensus 291 ~~~~--d~~~~L~ei~RvLkPGG~lvis~P~---~~~~~~e~--~~~~~~l~~l~~~~g~~~v~~~~~ 351 (522)
+|.+ +...++.++.++|||||++++..+. .+...... ...-+++.++++. |+++.....
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 7776 6688999999999999998876531 11100000 0012356667765 988877655
No 75
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.33 E-value=1.5e-12 Score=127.06 Aligned_cols=133 Identities=14% Similarity=0.153 Sum_probs=96.2
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC--CC------------------------------
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG--IP------------------------------ 262 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg--~~------------------------------ 262 (522)
+..+|||||||+|.++..++.... .++.+.|+++.+++.++++. .+
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 347899999999999988886521 36677788888888886652 11
Q ss_pred --e-EEEEeCCCCCC-CCC---CCceEEEecccccc----chhhhHHHHHHHHHhCCCCeEEEEEeCCCCCC---Chh--
Q 009946 263 --S-TLGVLGTKRLP-YPS---RSFELAHCSRCRID----WLQRDGILLLELDRLLRPGGYFVYSSPEAYAH---DPE-- 326 (522)
Q Consensus 263 --~-~~~~~d~~~lp-f~d---~sFDlVv~s~~~l~----~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~---~~e-- 326 (522)
+ .+..+|+...+ +++ ++||+|+|+. +++ +..+...+|.++.|+|||||+|++.++..... ...
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTL-CLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEES-CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhh-hhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccc
Confidence 5 78888877654 355 8999999988 477 56677889999999999999999987421100 000
Q ss_pred H--HHHHHHHHHHHHhcCcEEEEEec
Q 009946 327 N--RRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 327 ~--~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
. ...-+++.++++++||+++....
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccCHHHHHHHHHHCCCEEEEEEE
Confidence 0 00123788899999999887654
No 76
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.32 E-value=1.1e-11 Score=118.32 Aligned_cols=125 Identities=13% Similarity=0.176 Sum_probs=91.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEeCCCCCC--CCCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVLGTKRLP--YPSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~d~~~lp--f~d~sFDlVv~s~~ 288 (522)
..+|||||||+|.++..++... ....+.+.|+++.+++.|+++ + .++.+..+|+..++ +++++||+|++...
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 3679999999999999998652 123455556677777666553 4 36889999988877 77889999998763
Q ss_pred cccchh--------hhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 289 RIDWLQ--------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 289 ~l~~~~--------d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
.+|.. ....++.++.++|||||.+++.+... ...+.+.+++++.||+.+....
T Consensus 121 -~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 121 -DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR--------GLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp -CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH--------HHHHHHHHHHHHHTCEEEEEES
T ss_pred -CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH--------HHHHHHHHHHHHCCCeeeeccc
Confidence 43322 12579999999999999999976431 1245677788888998876554
No 77
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.31 E-value=1e-12 Score=129.99 Aligned_cols=133 Identities=11% Similarity=0.065 Sum_probs=89.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC------C---------------------------
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG------I--------------------------- 261 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg------~--------------------------- 261 (522)
+..+|||||||+|.++..++... .-.+.+.|+++.+++.|+++. .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 44789999999998877666542 114555677777777665430 0
Q ss_pred -CeE-EEEeCCCC-CCC---CCCCceEEEeccccccch----hhhHHHHHHHHHhCCCCeEEEEEeCCC---CCCChh--
Q 009946 262 -PST-LGVLGTKR-LPY---PSRSFELAHCSRCRIDWL----QRDGILLLELDRLLRPGGYFVYSSPEA---YAHDPE-- 326 (522)
Q Consensus 262 -~~~-~~~~d~~~-lpf---~d~sFDlVv~s~~~l~~~----~d~~~~L~ei~RvLkPGG~lvis~P~~---~~~~~e-- 326 (522)
.+. +..+|+.. .|+ ..++||+|+|+.+ +||+ ++...+|.+++|+|||||+|++++... +.....
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~-l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~ 211 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLA-MECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREF 211 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHH-HHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEe
Confidence 122 67788666 343 3578999999984 6664 556789999999999999999987321 100000
Q ss_pred --HHHHHHHHHHHHHhcCcEEEEEec
Q 009946 327 --NRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 327 --~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
..-.-+++.++++++||+++....
T Consensus 212 ~~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 212 SCVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred eccccCHHHHHHHHHHCCCEEEEEee
Confidence 000234788899999999886554
No 78
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.31 E-value=9.8e-12 Score=122.43 Aligned_cols=104 Identities=13% Similarity=0.162 Sum_probs=74.7
Q ss_pred CCCeEEEECCCCchHHHHHhhC-----CCcccccCcccc-cHHHHHHHHHc----C--CCeEEEEeC---CCCCCCCCCC
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDV-HENQIQFALER----G--IPSTLGVLG---TKRLPYPSRS 279 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~-----~v~gvdis~~Di-s~a~i~~A~~r----g--~~~~~~~~d---~~~lpf~d~s 279 (522)
+..+|||||||+|.++..++++ .++++|+++..+ ++.+++.|+++ + .++.+...| ...+|+++++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 122 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQH 122 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCC
Confidence 3468999999999999998864 355555554300 00134444333 3 357888887 5566778899
Q ss_pred ceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 280 FELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 280 FDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
||+|++.. +++|.+++..+++.+.++++|||++++.+..
T Consensus 123 fD~v~~~~-~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 123 FDRVVLAH-SLWYFASANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp CSEEEEES-CGGGSSCHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred EEEEEEcc-chhhCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 99999888 5888888888888888888889999998743
No 79
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.31 E-value=5.1e-11 Score=109.93 Aligned_cols=132 Identities=20% Similarity=0.226 Sum_probs=93.0
Q ss_pred CCeeecCCCCCCCCcc-HHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHH
Q 009946 176 GEKINFPGGGTHFHDG-ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQ 254 (522)
Q Consensus 176 g~~~~Fpgg~~~F~~g-a~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~ 254 (522)
+..+.|......|... .+...+.+.+.+.. .+..+|||+|||+|.++..++.. +..+.+.|+++.+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~ 88 (194)
T 1dus_A 20 GKKLKFKTDSGVFSYGKVDKGTKILVENVVV--------DKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIK 88 (194)
T ss_dssp TEEEEEEEETTSTTTTSCCHHHHHHHHHCCC--------CTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHH
T ss_pred CCceEEEeCCCcCCccccchHHHHHHHHccc--------CCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHH
Confidence 4445553333334333 22444555565542 23468999999999999999876 456667778888877
Q ss_pred HHHHc----CCC---eEEEEeCCCCCCCCCCCceEEEeccccccc-hhhhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 255 FALER----GIP---STLGVLGTKRLPYPSRSFELAHCSRCRIDW-LQRDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 255 ~A~~r----g~~---~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~-~~d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
.++++ +.. +.+...|... ++++++||+|++.. .+++ ..+...++.++.++|+|||.+++..+..
T Consensus 89 ~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~-~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 89 LAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNP-PIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp HHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECC-CSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred HHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECC-CcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 77665 433 7888888766 34567899999876 4555 4566789999999999999999988654
No 80
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.30 E-value=2.7e-12 Score=130.34 Aligned_cols=101 Identities=15% Similarity=0.137 Sum_probs=73.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCC-------eEEEEeCC------CCC--CCC
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIP-------STLGVLGT------KRL--PYP 276 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~-------~~~~~~d~------~~l--pf~ 276 (522)
..+|||||||+|..+..++... +..+.+.|+++.+++.|+++ +.. +.+.+.+. ..+ +++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 5789999999997665555432 23566667788888877765 222 34666665 222 356
Q ss_pred CCCceEEEeccccccch---hhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 277 SRSFELAHCSRCRIDWL---QRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 277 d~sFDlVv~s~~~l~~~---~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+++||+|+|.. ++||. .+...+|++++|+|||||+|++++|+
T Consensus 127 ~~~FD~V~~~~-~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQF-AIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEES-CGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECc-hHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 78999999988 57764 34578999999999999999999876
No 81
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.30 E-value=1.2e-11 Score=118.93 Aligned_cols=98 Identities=19% Similarity=0.340 Sum_probs=80.4
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEeccccccc
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~ 292 (522)
.+|||||||+|.++..+++. ..+.+.|+++.+++.|+++ +.++.+...|...++++ ++||+|++...+++|
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 109 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNY 109 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhh
Confidence 68999999999999999875 3566667788888777665 45788999998888876 789999987535777
Q ss_pred h---hhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 293 L---QRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 293 ~---~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
. .+...+++++.++|||||.+++..+.
T Consensus 110 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 110 LQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp CCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 6 55678999999999999999997754
No 82
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.29 E-value=1.2e-11 Score=120.17 Aligned_cols=101 Identities=20% Similarity=0.334 Sum_probs=81.5
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
+..+|||+|||+|.++..|+++ +..+.+.|+++.+++.|+++ +.++.+..+|...++++ ++||+|+|..+.+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTI 116 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCch
Confidence 3468999999999999999886 44677778888888877654 56788999998888876 6899999865445
Q ss_pred cch--hhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 291 DWL--QRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 291 ~~~--~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
++. .+...+|.++.++|||||.+++..|.
T Consensus 117 ~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 117 MYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 544 35578999999999999999998765
No 83
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.29 E-value=2.1e-11 Score=115.04 Aligned_cols=119 Identities=20% Similarity=0.159 Sum_probs=89.5
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCC-eEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIP-STLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~-~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
..+|||+|||+|.++..+++.. ...+.+.|+++.+++.|+++ +.. +.+...|.... .+++||+|+++. .+
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~-~~ 135 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLG--AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVANI-LA 135 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEEES-CH
T ss_pred CCEEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEECC-cH
Confidence 4689999999999999988752 22556667777777777664 443 78888887654 357899999876 34
Q ss_pred cchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 291 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
++ ...++.++.++|||||+++++..... ..+.+.+++++.||+++....
T Consensus 136 ~~---~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 136 EI---LLDLIPQLDSHLNEDGQVIFSGIDYL--------QLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp HH---HHHHGGGSGGGEEEEEEEEEEEEEGG--------GHHHHHHHHHHTTEEEEEEEE
T ss_pred HH---HHHHHHHHHHhcCCCCEEEEEecCcc--------cHHHHHHHHHHcCCceEEeec
Confidence 43 46789999999999999999753321 245678889999999887544
No 84
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.27 E-value=1e-10 Score=110.45 Aligned_cols=117 Identities=12% Similarity=0.002 Sum_probs=87.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
..+|||||||+|.++..++... ....+.+.|+++.+++.|+++ + .++.+...|..+.....++||+|++... .
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~-~ 118 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGS-G 118 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCC-T
T ss_pred CCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCC-C
Confidence 4789999999999999998752 124556667777777777654 3 3578888887555444467999998763 3
Q ss_pred cchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEE
Q 009946 291 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (522)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~ 345 (522)
+ +...++.++.++|||||.+++..+.. ...+++.+.+++.||.+
T Consensus 119 ~---~~~~~l~~~~~~LkpgG~l~~~~~~~--------~~~~~~~~~l~~~g~~~ 162 (204)
T 3e05_A 119 G---MLEEIIDAVDRRLKSEGVIVLNAVTL--------DTLTKAVEFLEDHGYMV 162 (204)
T ss_dssp T---CHHHHHHHHHHHCCTTCEEEEEECBH--------HHHHHHHHHHHHTTCEE
T ss_pred c---CHHHHHHHHHHhcCCCeEEEEEeccc--------ccHHHHHHHHHHCCCce
Confidence 3 66789999999999999999987542 23567788899999943
No 85
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.27 E-value=1.2e-11 Score=118.76 Aligned_cols=124 Identities=10% Similarity=0.158 Sum_probs=89.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCC--CCCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLP--YPSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lp--f~d~sFDlVv~s~~ 288 (522)
..+|||||||+|.++..|+... ....+.+.|+++.+++.|+++ +. ++.+..+|+..++ +++++||.|++...
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 3679999999999999998652 234556667777777776654 43 6888888988776 77889999987542
Q ss_pred cccchhh--------hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 289 RIDWLQR--------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 289 ~l~~~~d--------~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
.+|... ...++.++.++|||||.|++.+... ...+.+...+++.||......
T Consensus 118 -~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~--------~~~~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 118 -DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR--------GLFEYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp -CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH--------HHHHHHHHHHHHHTCEEEEEE
T ss_pred -CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCcccccc
Confidence 333221 2579999999999999999987431 224456677778899876543
No 86
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.27 E-value=1e-11 Score=123.46 Aligned_cols=97 Identities=20% Similarity=0.310 Sum_probs=80.4
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
..+|||+|||+|.++..|++. +.++.+.|+++.+++.|+++ +.++.+...|+..+++ +++||+|+|+. +++
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~-~~~ 195 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTV-VFM 195 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECS-SGG
T ss_pred CCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEcc-chh
Confidence 468999999999999999987 44667777888877776654 5588999999988887 68999999988 577
Q ss_pred chhh--hHHHHHHHHHhCCCCeEEEEEe
Q 009946 292 WLQR--DGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 292 ~~~d--~~~~L~ei~RvLkPGG~lvis~ 317 (522)
|..+ ...++.++.++|||||.+++..
T Consensus 196 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 7744 4589999999999999988765
No 87
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.27 E-value=9.2e-11 Score=111.79 Aligned_cols=118 Identities=12% Similarity=-0.036 Sum_probs=89.2
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+|||||||+|.++..++.. +..+.+.|+++.+++.|+++ +. ++.+...|..+......+||+|++...
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~- 131 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG- 131 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC-
T ss_pred CCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc-
Confidence 478999999999999999876 45666667788888777654 43 588888888773323357999997652
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+ +.. ++.++.++|||||++++..... ....++.+.+++.|+++.....
T Consensus 132 ~----~~~-~l~~~~~~LkpgG~lv~~~~~~--------~~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 132 G----SQA-LYDRLWEWLAPGTRIVANAVTL--------ESETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp C----CHH-HHHHHHHHSCTTCEEEEEECSH--------HHHHHHHHHHHHHCSEEEEEEE
T ss_pred c----cHH-HHHHHHHhcCCCcEEEEEecCc--------ccHHHHHHHHHhCCCcEEEEEe
Confidence 3 455 9999999999999999987542 2355677788888988776543
No 88
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.26 E-value=2.6e-11 Score=116.34 Aligned_cols=124 Identities=15% Similarity=0.118 Sum_probs=89.7
Q ss_pred CCCeEEEECCC-CchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCC-CCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRL-PYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCG-tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~l-pf~d~sFDlVv~s~~ 288 (522)
+..+|||+||| +|.++..++... +..+.+.|+++.+++.|+++ +.++.+..+|...+ ++++++||+|+++..
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 34789999999 999999988752 34555667777777766544 55788888886433 456689999998742
Q ss_pred cccch-------------------hhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q 009946 289 RIDWL-------------------QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (522)
Q Consensus 289 ~l~~~-------------------~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~ 348 (522)
.++. .....++.++.++|||||++++..|... ...+++.+++++.||.+...
T Consensus 133 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------~~~~~~~~~l~~~g~~~~~~ 203 (230)
T 3evz_A 133 -YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-------KLLNVIKERGIKLGYSVKDI 203 (230)
T ss_dssp -CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-------HHHHHHHHHHHHTTCEEEEE
T ss_pred -CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-------hHHHHHHHHHHHcCCceEEE
Confidence 2221 1136799999999999999999875431 23457788899999977654
No 89
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.26 E-value=7.9e-11 Score=107.81 Aligned_cols=137 Identities=11% Similarity=0.039 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEE
Q 009946 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLG 266 (522)
Q Consensus 192 a~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~ 266 (522)
.....+.+.+.+... +..+|||+|||+|.++..++.. +..+.+.|+++.+++.++++ + .++.+.
T Consensus 20 ~~~~~~~~~~~~~~~--------~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 88 (183)
T 2yxd_A 20 KEEIRAVSIGKLNLN--------KDDVVVDVGCGSGGMTVEIAKR---CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQII 88 (183)
T ss_dssp CHHHHHHHHHHHCCC--------TTCEEEEESCCCSHHHHHHHTT---SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHcCCC--------CCCEEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 345555666666432 3468999999999999999873 44566667777777777655 3 357888
Q ss_pred EeCCCCCCCCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q 009946 267 VLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (522)
Q Consensus 267 ~~d~~~lpf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v 346 (522)
..|... ++++++||+|++... .+...++.++.++ |||.+++..+.. ....++.+.+++.||.+.
T Consensus 89 ~~d~~~-~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 89 KGRAED-VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIVL--------ENAAKIINEFESRGYNVD 152 (183)
T ss_dssp ESCHHH-HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESCH--------HHHHHHHHHHHHTTCEEE
T ss_pred ECCccc-cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEeccc--------ccHHHHHHHHHHcCCeEE
Confidence 888766 666678999998874 5567899999999 999999988542 224567888899999877
Q ss_pred EEecceEEE
Q 009946 347 SKKDQTVIW 355 (522)
Q Consensus 347 ~~~~~~~iw 355 (522)
..+.....+
T Consensus 153 ~~~~~~~~~ 161 (183)
T 2yxd_A 153 AVNVFISYA 161 (183)
T ss_dssp EEEEEEEEE
T ss_pred EEEeeeehh
Confidence 665444443
No 90
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.25 E-value=1.1e-11 Score=121.88 Aligned_cols=96 Identities=25% Similarity=0.369 Sum_probs=82.1
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchhh
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d 295 (522)
..+|||||||+|.++..+++.. .+.++.+.|+++.+++.|++++.++.+...|...+++++++||+|++... .
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~----- 158 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA-P----- 158 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC-C-----
T ss_pred CCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC-h-----
Confidence 4689999999999999998752 24567778999999999999888889999999999998899999997653 2
Q ss_pred hHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 296 DGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 296 ~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
..+.++.|+|||||.+++++|..
T Consensus 159 --~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 --CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp --CCHHHHHHHEEEEEEEEEEEECT
T ss_pred --hhHHHHHHhcCCCcEEEEEEcCH
Confidence 25899999999999999998764
No 91
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.24 E-value=3.1e-11 Score=111.59 Aligned_cols=116 Identities=11% Similarity=0.015 Sum_probs=90.1
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchhh
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d 295 (522)
..+|||+|||+|.++..|+++. .+.+.|+++.+++. ..++.+..+|+.. ++++++||+|+++. .+++..+
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~-~~~~~~~ 93 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNP-PYVPDTD 93 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECC-CCBTTCC
T ss_pred CCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECC-CCccCCc
Confidence 3589999999999999999873 77777888888776 4567888888876 66678999999876 3554333
Q ss_pred ---------hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 296 ---------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 296 ---------~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
...++.++.+.| |||.++++.+... ..+++.+++++.||+......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~--------~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 94 DPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN--------RPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp CTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG--------CHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC--------CHHHHHHHHHHCCCcEEEEEe
Confidence 256889999999 9999999875431 245678889999998876544
No 92
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.24 E-value=2e-11 Score=120.82 Aligned_cols=157 Identities=10% Similarity=-0.035 Sum_probs=100.5
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC---------CeEEEEeCCCCC-------CCCCCC
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI---------PSTLGVLGTKRL-------PYPSRS 279 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~---------~~~~~~~d~~~l-------pf~d~s 279 (522)
..+|||+|||+|.++..|+.+. .+..+.+.|+++.+++.|+++-. ++.+...|+.++ ++++++
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 4689999999999999998762 23567777888888888877532 278888898776 356789
Q ss_pred ceEEEeccccc----------------c-chhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcC
Q 009946 280 FELAHCSRCRI----------------D-WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC 342 (522)
Q Consensus 280 FDlVv~s~~~l----------------~-~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g 342 (522)
||+|+++...+ + .......++.++.++|||||+|++..+.. ...++..++++.
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~~~- 185 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ---------SVAEIIAACGSR- 185 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG---------GHHHHHHHHTTT-
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH---------HHHHHHHHHHhc-
Confidence 99999863111 0 11235678999999999999999987643 134556666664
Q ss_pred cEEEEEecceEEEeccCCcccccccCCC-----CCCCCCCCCCCCC
Q 009946 343 WKIVSKKDQTVIWAKPISNSCYLKRVPG-----SRPPLCSSDDDPD 383 (522)
Q Consensus 343 ~~~v~~~~~~~iw~Kp~~~~c~~~r~~~-----~~p~lC~~~~~~d 383 (522)
|.............++.+......++.. ..|+|+..+++..
T Consensus 186 ~~~~~i~~v~~~~~~~~~~~lv~~~k~~~~~~~~~~~l~i~~~~~~ 231 (260)
T 2ozv_A 186 FGGLEITLIHPRPGEDAVRMLVTAIKGSRARLTFRAPLIMHETGSH 231 (260)
T ss_dssp EEEEEEEEEESSTTSCCCEEEEEEEETCCCCCEECCCEESSCTTCC
T ss_pred CCceEEEEEcCCCCCCceEEEEEEEeCCCCCceecCCEEEECCCCC
Confidence 6655433322212233333333333322 2355666544433
No 93
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.24 E-value=1.4e-11 Score=115.52 Aligned_cols=104 Identities=17% Similarity=0.077 Sum_probs=75.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCC-CCCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLP-YPSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lp-f~d~sFDlVv~s~~ 288 (522)
..+|||+|||+|.++..++++.-....+.+.|+++.+++.|+++ + .++.+...|+..++ +.+++||+|++...
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 46899999999999999887510112555667777777777655 3 36888888887776 56689999997653
Q ss_pred ccc--------chhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 289 RID--------WLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 289 ~l~--------~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
.+. ...+...++.++.++|||||++++....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 103 YLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp BCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 211 1224457999999999999999998743
No 94
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.24 E-value=9.8e-11 Score=107.21 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=86.5
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCC-CCCCCCCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGT-KRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~-~~lpf~d~sFDlVv~s~~ 288 (522)
..+|||+|||+|.++..++... .+..+.+.|+++.+++.|+++ +. ++ +...|. +.++..+++||+|++...
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~ 103 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGG 103 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-
T ss_pred CCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECCc
Confidence 4689999999999999998752 245667778888888888765 33 35 666665 334433378999998874
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~ 348 (522)
+++ ..++.++.++|||||++++..... .....+..++++.|+++...
T Consensus 104 -~~~----~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 104 -LTA----PGVFAAAWKRLPVGGRLVANAVTV--------ESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp -TTC----TTHHHHHHHTCCTTCEEEEEECSH--------HHHHHHHHHHHHHCCEEEEE
T ss_pred -ccH----HHHHHHHHHhcCCCCEEEEEeecc--------ccHHHHHHHHHHcCCeeEEE
Confidence 555 569999999999999999987542 22446677788888877653
No 95
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.24 E-value=1.7e-11 Score=116.88 Aligned_cols=133 Identities=17% Similarity=0.125 Sum_probs=87.8
Q ss_pred CCeEEEECCCCchHHHHHhhC----CCcccccCcccccHHHHHHHHH----cCC-CeEEEEeCCCCCCCCCCCceEEEec
Q 009946 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGI-PSTLGVLGTKRLPYPSRSFELAHCS 286 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~----~v~gvdis~~Dis~a~i~~A~~----rg~-~~~~~~~d~~~lpf~d~sFDlVv~s 286 (522)
..+|||||||+|.++..|+++ .++++|+++.++.... +.|++ .+. ++.+..+|+.++|+++++ |.|+..
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~-~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKIS-AKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHH-HHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 468999999999999999875 3555555444332211 12222 232 688999999999998776 777632
Q ss_pred c--ccc--cchhhhHHHHHHHHHhCCCCeEEEEEeCCCCC--CCh--------hHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 287 R--CRI--DWLQRDGILLLELDRLLRPGGYFVYSSPEAYA--HDP--------ENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 287 ~--~~l--~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~--~~~--------e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
. +.. +|.+++..+|.++.|+|||||.++++...... ... .....-+.+..+++++||++.....
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~~ 183 (218)
T 3mq2_A 106 MPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCRY 183 (218)
T ss_dssp SCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred ccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeeec
Confidence 2 122 36667788999999999999999997532100 000 0111223488899999999886543
No 96
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.23 E-value=1.7e-11 Score=114.50 Aligned_cols=134 Identities=17% Similarity=0.133 Sum_probs=89.4
Q ss_pred CCeeecCCCCCCCCccHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHH
Q 009946 176 GEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQF 255 (522)
Q Consensus 176 g~~~~Fpgg~~~F~~ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~ 255 (522)
|..+..|. ..+....+...+.+.+.+.... .....+|||+|||+|.++..++.+. ...+.+.|+++.+++.
T Consensus 12 g~~l~~~~--~~~rp~~~~~~~~l~~~l~~~~-----~~~~~~vLDlgcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~ 82 (189)
T 3p9n_A 12 GRRIAVPP--RGTRPTTDRVRESLFNIVTARR-----DLTGLAVLDLYAGSGALGLEALSRG--AASVLFVESDQRSAAV 82 (189)
T ss_dssp TCEEECCS--CCC---CHHHHHHHHHHHHHHS-----CCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEECCHHHHHH
T ss_pred CcEecCCC--CCCccCcHHHHHHHHHHHHhcc-----CCCCCEEEEeCCCcCHHHHHHHHCC--CCeEEEEECCHHHHHH
Confidence 33455554 3344455555566655554210 1234689999999999999777652 1234555666666666
Q ss_pred HHHc----CC-CeEEEEeCCCCCC--CCCCCceEEEeccccccch-hhhHHHHHHHHH--hCCCCeEEEEEeCC
Q 009946 256 ALER----GI-PSTLGVLGTKRLP--YPSRSFELAHCSRCRIDWL-QRDGILLLELDR--LLRPGGYFVYSSPE 319 (522)
Q Consensus 256 A~~r----g~-~~~~~~~d~~~lp--f~d~sFDlVv~s~~~l~~~-~d~~~~L~ei~R--vLkPGG~lvis~P~ 319 (522)
|+++ +. ++.+..+|+.+++ +++++||+|++... .++. .+...++.++.+ +|+|||.+++..+.
T Consensus 83 a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p-~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 83 IARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP-YNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC-TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred HHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC-CCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 6554 43 6888888876654 44688999998763 5553 667889999999 99999999998754
No 97
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.23 E-value=5.4e-11 Score=120.75 Aligned_cols=132 Identities=13% Similarity=0.143 Sum_probs=95.6
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
+..+|||||||+|.++..++++. .+..+.+.|++ .+++.|+++ +. ++.+...|..+.+++++ ||+|++..
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~- 240 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPN- 240 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEES-
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcc-
Confidence 34789999999999999998752 23456666777 777777654 33 48899999887777654 99999988
Q ss_pred cccchhh--hHHHHHHHHHhCCCCeEEEEEeCCCCCC--ChhHH----------------HHHHHHHHHHHhcCcEEEEE
Q 009946 289 RIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAH--DPENR----------------RIWNAMYDLLKSMCWKIVSK 348 (522)
Q Consensus 289 ~l~~~~d--~~~~L~ei~RvLkPGG~lvis~P~~~~~--~~e~~----------------~~~~~l~~l~~~~g~~~v~~ 348 (522)
++|+.++ ...+|+++.++|+|||++++.++..... ..... ...+++.++++++||+.++.
T Consensus 241 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~ 320 (335)
T 2r3s_A 241 FLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQL 320 (335)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEE
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeE
Confidence 5776643 3689999999999999999987543211 11100 01347888999999988865
Q ss_pred ec
Q 009946 349 KD 350 (522)
Q Consensus 349 ~~ 350 (522)
..
T Consensus 321 ~~ 322 (335)
T 2r3s_A 321 HS 322 (335)
T ss_dssp EC
T ss_pred EE
Confidence 43
No 98
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.23 E-value=5.1e-11 Score=133.92 Aligned_cols=119 Identities=15% Similarity=0.213 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----------C-
Q 009946 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----------G- 260 (522)
Q Consensus 192 a~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----------g- 260 (522)
.....+.+.+.+.. ....+|||||||+|.++..|++..-....+.+.|+++.+++.|+++ +
T Consensus 706 ~eqRle~LLelL~~--------~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl 777 (950)
T 3htx_A 706 SKQRVEYALKHIRE--------SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV 777 (950)
T ss_dssp HHHHHHHHHHHHHH--------SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC
T ss_pred HHHHHHHHHHHhcc--------cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC
Confidence 34445555555542 1347899999999999999987631224677778888888888762 2
Q ss_pred CCeEEEEeCCCCCCCCCCCceEEEeccccccchhhhH--HHHHHHHHhCCCCeEEEEEeCCC
Q 009946 261 IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDG--ILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 261 ~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d~~--~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
.++.+.++|+..+++++++||+|+|.. +++|++++. .++.++.|+|||| .+++++|+.
T Consensus 778 ~nVefiqGDa~dLp~~d~sFDlVV~~e-VLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 778 KSATLYDGSILEFDSRLHDVDIGTCLE-VIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp SEEEEEESCTTSCCTTSCSCCEEEEES-CGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred CceEEEECchHhCCcccCCeeEEEEeC-chhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 358899999999999999999999988 688887765 5899999999999 888888753
No 99
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.22 E-value=1.4e-11 Score=124.58 Aligned_cols=103 Identities=18% Similarity=0.334 Sum_probs=80.7
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC------------CCeEEEEeCCCCCC----CC--
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG------------IPSTLGVLGTKRLP----YP-- 276 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg------------~~~~~~~~d~~~lp----f~-- 276 (522)
...+|||||||+|.++..++... +..+.+.|+++.+++.|+++. .++.+..+|...++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 34689999999999999988642 345666677888877776642 25788899988876 53
Q ss_pred CCCceEEEeccccccch----hhhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 277 SRSFELAHCSRCRIDWL----QRDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 277 d~sFDlVv~s~~~l~~~----~d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
+++||+|+|+. ++||. ++...+|.++.++|||||.+++++|..
T Consensus 112 ~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QMCFDICSCQF-VCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TCCEEEEEEET-CGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCEEEEEEec-chhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 45899999988 68887 344689999999999999999998763
No 100
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.22 E-value=3.9e-11 Score=124.30 Aligned_cols=131 Identities=9% Similarity=0.104 Sum_probs=94.6
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCC--CCCCCCceEEEec
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRL--PYPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~l--pf~d~sFDlVv~s 286 (522)
...+|||||||+|.++..++++. ....+...|+ +.+++.|+++ + .++.+..+|.... |++ ++||+|+++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 34789999999999999998742 2335566677 7777777765 2 2588999997775 566 789999998
Q ss_pred cccccchhhh--HHHHHHHHHhCCCCeEEEEEeCCCCCCChhH---------------------HHHHHHHHHHHHhcCc
Q 009946 287 RCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPEN---------------------RRIWNAMYDLLKSMCW 343 (522)
Q Consensus 287 ~~~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~---------------------~~~~~~l~~l~~~~g~ 343 (522)
. ++|+.++. ..+|++++++|||||++++.++......... ....+++.++++++||
T Consensus 256 ~-vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 256 Q-FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGL 334 (363)
T ss_dssp S-CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTE
T ss_pred c-hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCC
Confidence 8 46655444 5789999999999999999875322111110 0023478889999999
Q ss_pred EEEEEe
Q 009946 344 KIVSKK 349 (522)
Q Consensus 344 ~~v~~~ 349 (522)
++++..
T Consensus 335 ~~v~~~ 340 (363)
T 3dp7_A 335 EVEEIQ 340 (363)
T ss_dssp EESCCC
T ss_pred eEEEEE
Confidence 887654
No 101
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.21 E-value=1.7e-11 Score=113.18 Aligned_cols=112 Identities=18% Similarity=0.135 Sum_probs=86.5
Q ss_pred CCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC-CCeEEEEeCCCCCCC---CCCCceEEEecccc
Q 009946 214 GNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPY---PSRSFELAHCSRCR 289 (522)
Q Consensus 214 ~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg-~~~~~~~~d~~~lpf---~d~sFDlVv~s~~~ 289 (522)
+.+.+|||||||. + ..|+++.|++.|+++. .++.+..+|+.++++ ++++||+|+|+. +
T Consensus 11 ~~g~~vL~~~~g~-----------v------~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~-~ 72 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------S------PVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGL-V 72 (176)
T ss_dssp CTTSEEEEEECTT-----------S------CHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECC-S
T ss_pred CCCCEEEEecCCc-----------e------eeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECC-h
Confidence 3457899999996 1 1588899999998874 358888999988887 789999999888 5
Q ss_pred ccch-hhhHHHHHHHHHhCCCCeEEEEEeCCCCCCC-hhHHHHHHHHHHHHHhcCc
Q 009946 290 IDWL-QRDGILLLELDRLLRPGGYFVYSSPEAYAHD-PENRRIWNAMYDLLKSMCW 343 (522)
Q Consensus 290 l~~~-~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~-~e~~~~~~~l~~l~~~~g~ 343 (522)
+||. ++...+|++++|+|||||+|++..|...... .......+++.++++++||
T Consensus 73 l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 73 PGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp TTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred hhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 8888 8889999999999999999999765321100 0000124578888999999
No 102
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=1.2e-11 Score=119.92 Aligned_cols=100 Identities=13% Similarity=0.087 Sum_probs=80.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC--CeEEEEeCCCCCCCCC-----CCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPS-----RSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~--~~~~~~~d~~~lpf~d-----~sFDlVv~s~~ 288 (522)
..+|||||||+|.++..|++.. ..+.+.|+++.+++.|+++.. ++.+...|+.++++.. ..||+|++..
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~- 132 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT- 132 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES-
T ss_pred CCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc-
Confidence 4679999999999999998762 256667888899998888743 6888888888765432 2489999887
Q ss_pred cccchh--hhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 289 RIDWLQ--RDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 289 ~l~~~~--d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+++|.+ +...++.++.++|||||++++....
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 588887 6689999999999999999888753
No 103
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.21 E-value=1.1e-10 Score=119.10 Aligned_cols=131 Identities=17% Similarity=0.084 Sum_probs=93.3
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
...+|||||||+|.++..++++. ....+...|+ +.+++.|+++ + .++.+...|.. .+++. +||+|++..
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~- 243 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSA- 243 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEES-
T ss_pred CCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEeh-
Confidence 45789999999999999998642 1234445567 6676766654 3 45889988876 45554 799999998
Q ss_pred cccchhhh--HHHHHHHHHhCCCCeEEEEEeCCCCCCCh---hHHH----------HHHHHHHHHHhcCcEEEEEec
Q 009946 289 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDP---ENRR----------IWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 289 ~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P~~~~~~~---e~~~----------~~~~l~~l~~~~g~~~v~~~~ 350 (522)
++|+.++. ..+|++++++|||||++++.++....... .+.. ..+++.++++++||+.++...
T Consensus 244 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 244 VLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 57776665 78999999999999999998753211100 0000 134788999999999886543
No 104
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.20 E-value=3.9e-11 Score=117.59 Aligned_cols=134 Identities=9% Similarity=0.004 Sum_probs=89.1
Q ss_pred CCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc---CCCeEEEEeCCC---CCCCCCCCceEEEecc
Q 009946 214 GNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---GIPSTLGVLGTK---RLPYPSRSFELAHCSR 287 (522)
Q Consensus 214 ~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r---g~~~~~~~~d~~---~lpf~d~sFDlVv~s~ 287 (522)
.++.+|||+|||+|.++..|++.--..-.+.+.|+++.+++.++++ ..++..+..+.. ..++..+++|+|++.
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d- 154 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD- 154 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC-
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe-
Confidence 4457899999999999999987511112344456677777766654 235666666643 345667889999864
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCC-CChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA-HDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~-~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+.+..+...++.++.++|||||+++++...... ........+.+..+.+++.||++++..+
T Consensus 155 --~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~ 216 (233)
T 4df3_A 155 --VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVH 216 (233)
T ss_dssp --CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred --ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEc
Confidence 344566778999999999999999997522100 0000012344556677889999887654
No 105
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.20 E-value=2.6e-10 Score=118.42 Aligned_cols=131 Identities=12% Similarity=0.043 Sum_probs=94.3
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
...+|||||||+|.++..++++. ....+...|+ +.+++.|+++ + .++.+...|.. .+++. .||+|++..
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~- 276 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKH- 276 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEES-
T ss_pred cCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhh-
Confidence 45789999999999999998751 2334555677 6666666653 3 35889988876 56665 799999998
Q ss_pred cccchhhhH--HHHHHHHHhCCCCeEEEEEeCCCCCC-Chh----HH----------HHHHHHHHHHHhcCcEEEEEec
Q 009946 289 RIDWLQRDG--ILLLELDRLLRPGGYFVYSSPEAYAH-DPE----NR----------RIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 289 ~l~~~~d~~--~~L~ei~RvLkPGG~lvis~P~~~~~-~~e----~~----------~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
++|+.++.. .+|+++.++|||||++++.++..... ... +. ...+++.++++++||++++...
T Consensus 277 vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 277 VLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEE
T ss_pred hhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEE
Confidence 577776664 79999999999999999977432111 110 00 0134788999999999987644
No 106
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.19 E-value=2.6e-11 Score=117.93 Aligned_cols=123 Identities=14% Similarity=0.121 Sum_probs=89.7
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCCC---CCCceEEEec
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPYP---SRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf~---d~sFDlVv~s 286 (522)
...+|||||||+|.++..|+... .+..+.+.|+++.+++.|++. +. ++.+..+|+.+++++ +++||+|+|.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 34689999999999999888421 134556667777777766553 44 588888888777754 5789999975
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
. ..+...++.++.++|||||++++...... . ....++.+.++..||++....
T Consensus 149 ~-----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~---~---~~~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 149 A-----VARLSVLSELCLPLVKKNGLFVALKAASA---E---EELNAGKKAITTLGGELENIH 200 (240)
T ss_dssp C-----CSCHHHHHHHHGGGEEEEEEEEEEECC-C---H---HHHHHHHHHHHHTTEEEEEEE
T ss_pred c-----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc---h---HHHHHHHHHHHHcCCeEeEEE
Confidence 4 24567899999999999999998753221 1 224567778889999887544
No 107
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.19 E-value=8.6e-11 Score=112.78 Aligned_cols=127 Identities=13% Similarity=0.117 Sum_probs=80.9
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHH----HHHHHHcCCCeEEEEeCCCC----CCCCCCCceEEEec
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQ----IQFALERGIPSTLGVLGTKR----LPYPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~----i~~A~~rg~~~~~~~~d~~~----lpf~d~sFDlVv~s 286 (522)
+..+|||+|||+|.++..|++..- ...+.+.|+++.+ ++.|+++ .++.+...|... .+++ ++||+|+|.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 346899999999999998886421 1245555666653 4445543 467777777665 3455 789999976
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEeCCC---CCCChhHHHHH-HHHHHHHHhcCcEEEEEecc
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEA---YAHDPENRRIW-NAMYDLLKSMCWKIVSKKDQ 351 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~---~~~~~e~~~~~-~~l~~l~~~~g~~~v~~~~~ 351 (522)
. .+ ..+...++.++.|+|||||+|+++.+.. .....+ ..+ ++++. +++. |++++....
T Consensus 134 ~--~~-~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~--~~~~~~~~~-l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 134 I--AQ-KNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPE--EVFKSVLKE-MEGD-FKIVKHGSL 195 (210)
T ss_dssp C--CS-TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHH--HHHHHHHHH-HHTT-SEEEEEEEC
T ss_pred c--cC-hhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHH--HHHHHHHHH-HHhh-cEEeeeecC
Confidence 3 22 2334456999999999999999986321 111111 222 22333 5666 988876543
No 108
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.19 E-value=1.4e-10 Score=111.94 Aligned_cols=127 Identities=12% Similarity=0.098 Sum_probs=88.4
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc---CCCeEEEEeCCCC----CCCCCCCceEEEecc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---GIPSTLGVLGTKR----LPYPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r---g~~~~~~~~d~~~----lpf~d~sFDlVv~s~ 287 (522)
...+|||+|||+|.++..|++..- ...+.+.|+++.+++.++++ ..++.+...|... ++++ ++||+|++
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~-- 149 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYE-- 149 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEE--
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEE--
Confidence 347899999999999999987521 23566667888888777654 2467888888877 7776 78999982
Q ss_pred ccccchhhh---HHHHHHHHHhCCCCeEEEEEeCC-CCCCChhHHHHH-HHHHHHHHhcCcEEEEEec
Q 009946 288 CRIDWLQRD---GILLLELDRLLRPGGYFVYSSPE-AYAHDPENRRIW-NAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 288 ~~l~~~~d~---~~~L~ei~RvLkPGG~lvis~P~-~~~~~~e~~~~~-~~l~~l~~~~g~~~v~~~~ 350 (522)
+..++ ..++.++.++|||||+++++... ...........+ +++. ++++.||++++...
T Consensus 150 ----~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~ 212 (230)
T 1fbn_A 150 ----DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVD 212 (230)
T ss_dssp ----CCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEE
T ss_pred ----ecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEc
Confidence 22333 67899999999999999996321 111111111223 4566 78889998876553
No 109
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.18 E-value=1.6e-10 Score=116.78 Aligned_cols=156 Identities=13% Similarity=0.210 Sum_probs=94.3
Q ss_pred cCCeeecCCCCCCC-CccHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhC---CCcccccCcccccH
Q 009946 175 NGEKINFPGGGTHF-HDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHE 250 (522)
Q Consensus 175 ~g~~~~Fpgg~~~F-~~ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~v~gvdis~~Dis~ 250 (522)
.++.+...+....| .++..+..+.+. .+.+. ....+|||||||||.++..|+++ .|+++|++..++.
T Consensus 52 ~~d~I~v~g~~~~yvsrg~~Kl~~~l~-~~~~~-------~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~- 122 (291)
T 3hp7_A 52 DGTELKLKGEKLRYVSRGGLKLEKALA-VFNLS-------VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLV- 122 (291)
T ss_dssp TTCCEEETTCCCCSSSTTHHHHHHHHH-HTTCC-------CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSC-
T ss_pred CCCEEEEcccccccccchHHHHHHHHH-hcCCC-------ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHH-
Confidence 34555565443333 344454444433 33221 23468999999999999988865 4666666555554
Q ss_pred HHHHHHHHcCCCeEEE-EeCCCCCC---CCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCC----
Q 009946 251 NQIQFALERGIPSTLG-VLGTKRLP---YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA---- 322 (522)
Q Consensus 251 a~i~~A~~rg~~~~~~-~~d~~~lp---f~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~---- 322 (522)
.+.+...++... ..++..++ ++..+||+|+|..+ +++ ...+|.++.|+|||||.+++..-+.+.
T Consensus 123 ----~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s-f~s---l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~ 194 (291)
T 3hp7_A 123 ----WKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS-FIS---LNLILPALAKILVDGGQVVALVKPQFEAGRE 194 (291)
T ss_dssp ----HHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCS-SSC---GGGTHHHHHHHSCTTCEEEEEECGGGTSCGG
T ss_pred ----HHHHhCcccceecccCceecchhhCCCCCCCEEEEEee-Hhh---HHHHHHHHHHHcCcCCEEEEEECcccccChh
Confidence 433433443322 22333333 34456999998663 443 367999999999999999987432221
Q ss_pred --------CChhHH-HHHHHHHHHHHhcCcEEEE
Q 009946 323 --------HDPENR-RIWNAMYDLLKSMCWKIVS 347 (522)
Q Consensus 323 --------~~~e~~-~~~~~l~~l~~~~g~~~v~ 347 (522)
+++... ...+++.+++..+||.+..
T Consensus 195 ~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 195 QIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp GCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred hcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 112222 2345788889999998774
No 110
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.18 E-value=2.1e-10 Score=105.55 Aligned_cols=131 Identities=15% Similarity=0.131 Sum_probs=93.3
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEE
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLG 266 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~ 266 (522)
......+.+.+.. .+..+|||+|||+|.++..++... ..+.+.|+++.+++.++++ +. ++.+.
T Consensus 19 ~~~~~~~~~~~~~--------~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~ 87 (192)
T 1l3i_A 19 MEVRCLIMCLAEP--------GKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLM 87 (192)
T ss_dssp HHHHHHHHHHHCC--------CTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEE
T ss_pred HHHHHHHHHhcCC--------CCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEE
Confidence 4444455555542 234689999999999999998763 4566667777777777653 33 67777
Q ss_pred EeCCCCCCCCC-CCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEE
Q 009946 267 VLGTKRLPYPS-RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (522)
Q Consensus 267 ~~d~~~lpf~d-~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~ 345 (522)
..|... ++++ ++||+|++... ++ +...++.++.++|+|||.+++..+.. ....++.+++++.||.+
T Consensus 88 ~~d~~~-~~~~~~~~D~v~~~~~-~~---~~~~~l~~~~~~l~~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 88 EGDAPE-ALCKIPDIDIAVVGGS-GG---ELQEILRIIKDKLKPGGRIIVTAILL--------ETKFEAMECLRDLGFDV 154 (192)
T ss_dssp ESCHHH-HHTTSCCEEEEEESCC-TT---CHHHHHHHHHHTEEEEEEEEEEECBH--------HHHHHHHHHHHHTTCCC
T ss_pred ecCHHH-hcccCCCCCEEEECCc-hH---HHHHHHHHHHHhcCCCcEEEEEecCc--------chHHHHHHHHHHCCCce
Confidence 777654 2232 58999998763 43 34789999999999999999987542 23456778889999954
Q ss_pred EE
Q 009946 346 VS 347 (522)
Q Consensus 346 v~ 347 (522)
..
T Consensus 155 ~~ 156 (192)
T 1l3i_A 155 NI 156 (192)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 111
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.17 E-value=1.4e-10 Score=112.89 Aligned_cols=122 Identities=10% Similarity=0.059 Sum_probs=91.6
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc-----C-CCeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-----G-IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r-----g-~~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
...+|||+|||+|.++..+++.--.+..+.+.|+++.+++.|+++ + .++.+...|..+.++++++||+|++.
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~-- 173 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD-- 173 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE--
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC--
Confidence 346899999999999999886511123555667777777777655 4 46788889988888888899999963
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
.+++..++.++.++|+|||++++..|.. ....++.+.+++.||..++...
T Consensus 174 ----~~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 174 ----LMEPWKVLEKAALALKPDRFLVAYLPNI--------TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp ----SSCGGGGHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHTTTTEEEEEEEE
T ss_pred ----CcCHHHHHHHHHHhCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCceEEEEE
Confidence 3455679999999999999999988653 1245666777889998776544
No 112
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.17 E-value=1.6e-11 Score=119.96 Aligned_cols=121 Identities=14% Similarity=0.221 Sum_probs=73.2
Q ss_pred CCCeEEEECCCCchHHHHHhhC---CCcccccCcccccHHHHHHHHHcCCCeEEEE-eCC-----CCCC---CCCCCceE
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGV-LGT-----KRLP---YPSRSFEL 282 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~---~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~-~d~-----~~lp---f~d~sFDl 282 (522)
...+|||||||+|.++..|+++ .|+++|+++ .|++.|+++...+.... .+. ..++ +...+||+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~-----~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~ 111 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGT-----NQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDV 111 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSC-----CCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECC
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCH-----HHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEE
Confidence 3468999999999999999875 345555554 44455555444332211 111 1221 22234554
Q ss_pred EEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCC------------ChhH-HHHHHHHHHHHHhcCcEEEEEe
Q 009946 283 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH------------DPEN-RRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 283 Vv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~------------~~e~-~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
++++ ...+|.++.|+|||||.+++...+.+.. +... ....+++.++++++||++....
T Consensus 112 v~~~---------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 112 SFIS---------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp SSSC---------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred Ehhh---------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 4422 1569999999999999999874221111 1111 1234578899999999987543
No 113
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.17 E-value=6.9e-11 Score=117.77 Aligned_cols=99 Identities=13% Similarity=0.023 Sum_probs=75.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCC-----CCCCceEEEecccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY-----PSRSFELAHCSRCR 289 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf-----~d~sFDlVv~s~~~ 289 (522)
+..+|||||||+|.++..|+++ +..+.+.|+++.|++.|+++.... +...+...++. .+++||+|+++. +
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~~-~ 119 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAEIPKELAGHFDFVLNDR-L 119 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEES-C
T ss_pred CcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccccccccCCCccEEEEhh-h
Confidence 3478999999999999999986 457778899999999998874322 22333333332 246899999887 4
Q ss_pred ccch--hhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 290 IDWL--QRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 290 l~~~--~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
++|. ++...++.++.++| |||.++++.+.
T Consensus 120 l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 120 INRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 6654 34467999999999 99999998864
No 114
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.16 E-value=8.6e-11 Score=113.52 Aligned_cols=131 Identities=12% Similarity=0.062 Sum_probs=84.7
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHH----HHHHHHHcCCCeEEEEeCCCC---CCCCCCCceEEEecc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHEN----QIQFALERGIPSTLGVLGTKR---LPYPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a----~i~~A~~rg~~~~~~~~d~~~---lpf~d~sFDlVv~s~ 287 (522)
...+|||+|||+|.++..|+++.-....+.+.|+++. +++.|+.+ .++.+..+|+.. +++.+++||+|++..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 3468999999999999999864100123444455544 44555554 678888888776 455668999999754
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCC-CCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAY-AHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~-~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
. .......++.++.++|||||.++++.+... .........+.+-.+++++.||++++..
T Consensus 156 ~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 215 (233)
T 2ipx_A 156 A---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQL 215 (233)
T ss_dssp C---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEE
T ss_pred C---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 2 222234568899999999999999764310 0111111223222577889999988643
No 115
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.16 E-value=1.9e-10 Score=118.73 Aligned_cols=131 Identities=20% Similarity=0.171 Sum_probs=91.8
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
...+|||||||+|.++..++++. ....+.+.|+ +.+++.|+++ +. ++.+...|..+ +++. .||+|++..
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~- 256 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSF- 256 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEES-
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEec-
Confidence 45789999999999999998752 2345556677 7777777654 33 58888888755 4443 499999988
Q ss_pred cccchhhh--HHHHHHHHHhCCCCeEEEEEeC--CCCCCC-hhHH---------------HHHHHHHHHHHhcCcEEEEE
Q 009946 289 RIDWLQRD--GILLLELDRLLRPGGYFVYSSP--EAYAHD-PENR---------------RIWNAMYDLLKSMCWKIVSK 348 (522)
Q Consensus 289 ~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P--~~~~~~-~e~~---------------~~~~~l~~l~~~~g~~~v~~ 348 (522)
++|+.++. ..+|+++.++|||||++++.++ ...... .... ...+++.++++++||++++.
T Consensus 257 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 336 (374)
T 1qzz_A 257 VLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASE 336 (374)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 57766665 4799999999999999999876 211100 0000 02346788999999998865
Q ss_pred ec
Q 009946 349 KD 350 (522)
Q Consensus 349 ~~ 350 (522)
..
T Consensus 337 ~~ 338 (374)
T 1qzz_A 337 RT 338 (374)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 116
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.15 E-value=3.3e-11 Score=126.02 Aligned_cols=102 Identities=13% Similarity=0.128 Sum_probs=73.9
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC----CeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI----PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~----~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
.+|||+|||+|.++..++.+. .+..+.+.|+++.+++.|+++ +. ++.+...|... ++++++||+|+|+..
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPP 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCC
T ss_pred CeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCC
Confidence 789999999999999998752 134555667777777766654 32 46778888766 566789999998763
Q ss_pred cccchh---h--hHHHHHHHHHhCCCCeEEEEEeCCCC
Q 009946 289 RIDWLQ---R--DGILLLELDRLLRPGGYFVYSSPEAY 321 (522)
Q Consensus 289 ~l~~~~---d--~~~~L~ei~RvLkPGG~lvis~P~~~ 321 (522)
+|+.. + ...++.++.++|||||.++++.+...
T Consensus 302 -fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 302 -FHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp -C-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred -cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 54321 1 13689999999999999999886543
No 117
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.15 E-value=1.1e-10 Score=116.13 Aligned_cols=121 Identities=11% Similarity=0.104 Sum_probs=90.6
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc-----C-CCeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-----G-IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r-----g-~~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
+..+|||+|||+|.++..+++....+..+.+.|+++.+++.|+++ + .++.+...|+.+ ++++++||+|++
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~--- 185 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIA--- 185 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEE---
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEE---
Confidence 347899999999999999886411134566667777777777655 3 357888888776 666788999996
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+.+++..++.++.++|||||+++++++.. ...+++.+.+++.||..++...
T Consensus 186 ---~~~~~~~~l~~~~~~LkpgG~l~i~~~~~--------~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 186 ---DIPDPWNHVQKIASMMKPGSVATFYLPNF--------DQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp ---CCSCGGGSHHHHHHTEEEEEEEEEEESSH--------HHHHHHHHHSGGGTEEEEEEEE
T ss_pred ---cCcCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCeEEEEEE
Confidence 23466789999999999999999998653 1245666778889998776543
No 118
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.14 E-value=3e-10 Score=113.51 Aligned_cols=153 Identities=12% Similarity=0.119 Sum_probs=101.7
Q ss_pred cCCeeecCCCCCCCCccHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHH
Q 009946 175 NGEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQ 254 (522)
Q Consensus 175 ~g~~~~Fpgg~~~F~~ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~ 254 (522)
.|-.+.+......|..........+.+.+. +..+|||+|||+|.++..++..... .+.+.|+++.+++
T Consensus 95 ~g~~f~~d~~~~~f~~~~~~~~~~l~~~~~----------~~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~ 162 (278)
T 2frn_A 95 NGIKYKLDVAKIMFSPANVKERVRMAKVAK----------PDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFK 162 (278)
T ss_dssp TTEEEEEETTTSCCCGGGHHHHHHHHHHCC----------TTCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHH
T ss_pred CCEEEEEEccceeEcCCcHHHHHHHHHhCC----------CCCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHH
Confidence 344444443445566554454555555542 2468999999999999999875211 3445566666666
Q ss_pred HHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHH
Q 009946 255 FALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENR 328 (522)
Q Consensus 255 ~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~ 328 (522)
.|+++ +. .+.+..+|+.+++. +++||+|++... .....++.++.++|||||.+++.+..... ....
T Consensus 163 ~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~ 234 (278)
T 2frn_A 163 FLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHNTVPEK--LMPR 234 (278)
T ss_dssp HHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEEEEEGG--GTTT
T ss_pred HHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-----hhHHHHHHHHHHHCCCCeEEEEEEeeccc--cccc
Confidence 66543 43 37788999888876 678999997542 23356899999999999999997643210 0011
Q ss_pred HHHHHHHHHHHhcCcEEEE
Q 009946 329 RIWNAMYDLLKSMCWKIVS 347 (522)
Q Consensus 329 ~~~~~l~~l~~~~g~~~v~ 347 (522)
...+.+.+.+++.||.+..
T Consensus 235 ~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 235 EPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp TTHHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHHcCCeeEE
Confidence 2356778889999998765
No 119
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.14 E-value=5.4e-11 Score=117.32 Aligned_cols=124 Identities=16% Similarity=0.084 Sum_probs=88.8
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCCC---CCCceEEEec
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPYP---SRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf~---d~sFDlVv~s 286 (522)
...+|||||||+|..+..|+... ....+++.|+++.++++|++. +. ++.+..+++++++.. +++||+|+|.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 45789999999999998887541 123455556777777766544 44 588898888777653 4789999975
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
. + .+...++.++.++|||||+|++...... . ....++...++..||++.+...
T Consensus 159 a--~---~~~~~ll~~~~~~LkpgG~l~~~~g~~~---~---~e~~~~~~~l~~~G~~~~~~~~ 211 (249)
T 3g89_A 159 A--V---APLCVLSELLLPFLEVGGAAVAMKGPRV---E---EELAPLPPALERLGGRLGEVLA 211 (249)
T ss_dssp S--S---CCHHHHHHHHGGGEEEEEEEEEEECSCC---H---HHHTTHHHHHHHHTEEEEEEEE
T ss_pred C--c---CCHHHHHHHHHHHcCCCeEEEEEeCCCc---H---HHHHHHHHHHHHcCCeEEEEEE
Confidence 4 2 3456899999999999999998653321 1 2244566778889998876543
No 120
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.14 E-value=2.6e-10 Score=116.09 Aligned_cols=129 Identities=17% Similarity=0.100 Sum_probs=87.7
Q ss_pred CeEEEECCCCchHHHHHhhC----CCcccccCcccccHHHHHHHHHc-CCCeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 217 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~----~v~gvdis~~Dis~a~i~~A~~r-g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
.+|||||||+|.++..++++ .++++|+ +..+..+........ ..++.+...|..+ +++ ++||+|++.. ++|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~-vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSR-IIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEES-CGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEch-hcc
Confidence 78999999999999998864 3555555 444433332222111 2468888888766 565 6799999988 466
Q ss_pred chhhhH--HHHHHHHHhCCCCeEEEEEeCCCCCC-ChhHH---------------HHHHHHHHHHHhcCcEEEEEe
Q 009946 292 WLQRDG--ILLLELDRLLRPGGYFVYSSPEAYAH-DPENR---------------RIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 292 ~~~d~~--~~L~ei~RvLkPGG~lvis~P~~~~~-~~e~~---------------~~~~~l~~l~~~~g~~~v~~~ 349 (522)
+.++.. .+|+++.++|||||++++.++..... ..... ...+++.++++++||+.++..
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 320 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIV 320 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEE
Confidence 555554 89999999999999999987432110 00000 013477889999999987654
No 121
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.14 E-value=1.3e-10 Score=112.73 Aligned_cols=134 Identities=14% Similarity=0.121 Sum_probs=81.4
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCccccc-HHHHHHH---HH----cCC-CeEEEEeCCCCCCCC-CCCceEEEe
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVH-ENQIQFA---LE----RGI-PSTLGVLGTKRLPYP-SRSFELAHC 285 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis-~a~i~~A---~~----rg~-~~~~~~~d~~~lpf~-d~sFDlVv~ 285 (522)
..+|||||||+|.++..|+.+. .+..+.+.|++ +.+++.| ++ .+. ++.+..+|...+|.. .+.+|.|++
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 4689999999999999998531 23344555555 4554444 32 233 578888998888632 144555554
Q ss_pred cccc----ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCC---------hhHHHHH-H--HHHHHHHhcCcEEEEEe
Q 009946 286 SRCR----IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD---------PENRRIW-N--AMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 286 s~~~----l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~---------~e~~~~~-~--~l~~l~~~~g~~~v~~~ 349 (522)
.... .+...+...+|.+++|+|||||+|++......... +.....| . ++.++++++||++....
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~~ 183 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDVK 183 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeeee
Confidence 3210 01112345689999999999999999432111000 0000111 1 48889999999988654
Q ss_pred c
Q 009946 350 D 350 (522)
Q Consensus 350 ~ 350 (522)
.
T Consensus 184 ~ 184 (225)
T 3p2e_A 184 E 184 (225)
T ss_dssp E
T ss_pred e
Confidence 3
No 122
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.14 E-value=2.4e-10 Score=103.34 Aligned_cols=94 Identities=17% Similarity=0.190 Sum_probs=70.9
Q ss_pred CCCeEEEECCCCchHHHHHhhC-----CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC--------CCCCCce
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFE 281 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~-----~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp--------f~d~sFD 281 (522)
...+|||+|||+|.++..+++. .++++|+++ ... . .++.+...|..+.+ +++++||
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~-----~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D 90 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP-----I-----VGVDFLQGDFRDELVMKALLERVGDSKVQ 90 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC-----C-----TTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc-----c-----CcEEEEEcccccchhhhhhhccCCCCcee
Confidence 3468999999999999888754 455665555 321 1 46788888888776 7778999
Q ss_pred EEEeccccccchhhh-----------HHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 282 LAHCSRCRIDWLQRD-----------GILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 282 lVv~s~~~l~~~~d~-----------~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
+|++.. .+++..+. ..++.++.++|+|||.++++.+..
T Consensus 91 ~i~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 91 VVMSDM-APNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp EEEECC-CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred EEEECC-CccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 999866 35544333 579999999999999999987543
No 123
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.13 E-value=1.8e-10 Score=112.58 Aligned_cols=121 Identities=16% Similarity=0.151 Sum_probs=82.0
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----------C-CCeEEEEeCCCC-CC--CCCCCce
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----------G-IPSTLGVLGTKR-LP--YPSRSFE 281 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----------g-~~~~~~~~d~~~-lp--f~d~sFD 281 (522)
..+|||||||+|.++..|+... ....+.+.|+++.+++.|+++ + .++.+..+|+.. ++ +++++||
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 4679999999999999998752 223455667777777666532 2 368899999876 66 7889999
Q ss_pred EEEeccccccchhh--------hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcC-cEEE
Q 009946 282 LAHCSRCRIDWLQR--------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC-WKIV 346 (522)
Q Consensus 282 lVv~s~~~l~~~~d--------~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g-~~~v 346 (522)
.|++... ..|... ...+|.++.++|||||.|++.+... .....+.+.+...+ |+.+
T Consensus 126 ~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~--------~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 126 KMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVL--------ELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHHTSTTEEEE
T ss_pred EEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCcccc
Confidence 9986542 333211 1469999999999999999976431 12334555556655 5443
No 124
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.13 E-value=1.1e-10 Score=116.93 Aligned_cols=102 Identities=12% Similarity=0.164 Sum_probs=78.2
Q ss_pred CCeEEEECCCCch----HHHHHhhC-C-Cc-ccccCcccccHHHHHHHHHcC----------------------------
Q 009946 216 IRNVLDVGCGVAS----FGAYLLSH-D-II-AMSLAPNDVHENQIQFALERG---------------------------- 260 (522)
Q Consensus 216 ~~~VLDIGCGtG~----~a~~La~~-~-v~-gvdis~~Dis~a~i~~A~~rg---------------------------- 260 (522)
..+|||+|||||. ++..|++. . .. +..+.+.|+++.+++.|++.-
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 3689999999997 55556543 1 11 357888899999999998741
Q ss_pred --------CCeEEEEeCCCCCCCC-CCCceEEEeccccccchhhh--HHHHHHHHHhCCCCeEEEEEeC
Q 009946 261 --------IPSTLGVLGTKRLPYP-SRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 261 --------~~~~~~~~d~~~lpf~-d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P 318 (522)
..+.|...|+.+.|++ .+.||+|+|.+ +++|.++. ..++.+++++|+|||+|++...
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crn-vliyf~~~~~~~vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRN-VMIYFDKTTQEDILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECS-SGGGSCHHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECC-chHhCCHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 1467888888776665 57899999988 57776555 6899999999999999998543
No 125
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.12 E-value=2.8e-11 Score=124.50 Aligned_cols=100 Identities=19% Similarity=0.239 Sum_probs=75.5
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEeccccccc
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~ 292 (522)
.+|||+|||+|.++..++++. ....+.+.|+++.+++.++++ +....+...|....+ +++||+|+|+. .+|+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~-~~~~ 273 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGRFDMIISNP-PFHD 273 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSCEEEEEECC-CCCS
T ss_pred CeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCCeeEEEECC-Cccc
Confidence 579999999999999998652 123555667777777776654 556677777765543 67899999887 3554
Q ss_pred -----hhhhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 293 -----LQRDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 293 -----~~d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
..+...++.++.++|||||.++++.+..
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 3445789999999999999999988654
No 126
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.11 E-value=3.9e-10 Score=116.22 Aligned_cols=131 Identities=16% Similarity=0.196 Sum_probs=89.1
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
+..+|||||||+|.++..++++. ....+.+.|+ +.+++.|+++ +. ++.+...|..+.++++. |+|+++.
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~- 264 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCR- 264 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEES-
T ss_pred CCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEec-
Confidence 45789999999999999998651 1223333344 4444444432 33 48899999888777643 9999988
Q ss_pred cccchhh--hHHHHHHHHHhCCCCeEEEEEeCCCCC---CCh----------hHH------HHHHHHHHHHHhcCcEEEE
Q 009946 289 RIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYA---HDP----------ENR------RIWNAMYDLLKSMCWKIVS 347 (522)
Q Consensus 289 ~l~~~~d--~~~~L~ei~RvLkPGG~lvis~P~~~~---~~~----------e~~------~~~~~l~~l~~~~g~~~v~ 347 (522)
++|+.++ ...+|+++.++|||||++++.++.... ... ... ...+++.++++++||+.++
T Consensus 265 vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~ 344 (359)
T 1x19_A 265 ILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVT 344 (359)
T ss_dssp CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEE
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEE
Confidence 5766655 578999999999999999887732110 000 000 1233678889999999886
Q ss_pred Eec
Q 009946 348 KKD 350 (522)
Q Consensus 348 ~~~ 350 (522)
...
T Consensus 345 ~~~ 347 (359)
T 1x19_A 345 MVR 347 (359)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 127
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.11 E-value=3.6e-11 Score=116.17 Aligned_cols=102 Identities=14% Similarity=0.151 Sum_probs=73.4
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCC-C--CCCCCceEEEecc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRL-P--YPSRSFELAHCSR 287 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~l-p--f~d~sFDlVv~s~ 287 (522)
..+|||||||+|.++..|+... ....+.+.|+++.+++.|+++ +. ++.+..+|+..+ + +++++||.|++..
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 4689999999999999998642 123344556666666665443 43 688888887663 3 6789999999765
Q ss_pred ccccchhhh--------HHHHHHHHHhCCCCeEEEEEeCC
Q 009946 288 CRIDWLQRD--------GILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 288 ~~l~~~~d~--------~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
. ..|.... ..++.++.|+|||||.|++++..
T Consensus 114 ~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 114 P-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp C-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred C-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 2 4443222 25999999999999999998743
No 128
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.10 E-value=2.3e-10 Score=108.14 Aligned_cols=95 Identities=16% Similarity=0.046 Sum_probs=75.8
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
+..+|||||||+|.++..|++. +..+.+.|+++.+++.|+++ + .++.+...|....+.++++||+|++.. .
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~-~ 152 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTA-A 152 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESS-B
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEcc-c
Confidence 3478999999999999999876 34566667778887777664 3 357888888877766678999999887 4
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+++..+ ++.++|||||++++..+.
T Consensus 153 ~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 153 PPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred hhhhhH------HHHHhcccCcEEEEEEcC
Confidence 666654 689999999999998876
No 129
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.10 E-value=1.7e-10 Score=113.71 Aligned_cols=119 Identities=13% Similarity=0.102 Sum_probs=83.5
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHH----cCCCeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~----rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
..+|||+|||+|.++..++... ..+.+.|+++.+++.|++ .+..+.+...+.... +++++||+|+++. ..+
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g---~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~-~~~ 195 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLG---GKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANL-YAE 195 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT---CEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEEC-CHH
T ss_pred CCEEEEecCCCcHHHHHHHHhC---CeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECC-cHH
Confidence 4689999999999999888752 144444555555554443 344577777775442 4457899999765 233
Q ss_pred chhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 292 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
....++.++.++|||||+++++.... ...+++.+++++.||+++....
T Consensus 196 ---~~~~~l~~~~~~LkpgG~lils~~~~--------~~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 196 ---LHAALAPRYREALVPGGRALLTGILK--------DRAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp ---HHHHHHHHHHHHEEEEEEEEEEEEEG--------GGHHHHHHHHHHTTCEEEEEEE
T ss_pred ---HHHHHHHHHHHHcCCCCEEEEEeecc--------CCHHHHHHHHHHCCCEEEEEec
Confidence 24679999999999999999976432 1245788889999999876543
No 130
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.10 E-value=3.5e-10 Score=113.06 Aligned_cols=102 Identities=13% Similarity=0.078 Sum_probs=77.8
Q ss_pred CCeEEEECCCC---chHHHHHhhCCCcccccCcccccHHHHHHHHHc---CCCeEEEEeCCCCCC-----------CCCC
Q 009946 216 IRNVLDVGCGV---ASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---GIPSTLGVLGTKRLP-----------YPSR 278 (522)
Q Consensus 216 ~~~VLDIGCGt---G~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r---g~~~~~~~~d~~~lp-----------f~d~ 278 (522)
..+|||||||+ |.++..+... ..+..+.+.|+++.+++.|+++ ..++.+..+|+.+.+ ++..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 47899999999 9887666542 1234566667888888888776 246888998876421 2334
Q ss_pred CceEEEeccccccchhh--hHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 279 SFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 279 sFDlVv~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+||+|++.. ++||+++ ...+|+++.++|||||+|+++...
T Consensus 157 ~~d~v~~~~-vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 157 RPAAIMLVG-MLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp SCCEEEETT-TGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCEEEEEec-hhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 899999877 6888876 688999999999999999998854
No 131
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.09 E-value=3.5e-10 Score=116.30 Aligned_cols=130 Identities=12% Similarity=0.009 Sum_probs=88.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHH----HcCCCeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFAL----ERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~----~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
...+|||||||+|.++..++++. ..+.+...|+++.. ..++ ....++.+..+|.. .++| +||+|++.. ++
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~~~~-~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~-vl 257 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDRAEVV-ARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKR-IL 257 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEECHHHH-TTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEES-CG
T ss_pred CCceEEEECCccCHHHHHHHHHC-CCCEEEEecCHHHh-hcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEeh-hc
Confidence 35789999999999999998742 12334455664332 2111 01235788888875 3444 799999988 57
Q ss_pred cchhhh--HHHHHHHHHhCCCCeEEEEEeCCCCCCChh----H--H----------HHHHHHHHHHHhcCcEEEEEec
Q 009946 291 DWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPE----N--R----------RIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 291 ~~~~d~--~~~L~ei~RvLkPGG~lvis~P~~~~~~~e----~--~----------~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
|+.++. ..+|++++++|||||++++.++........ . . ...+++.++++++||+.++...
T Consensus 258 h~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 258 HNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp GGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 777766 689999999999999999987532111000 0 0 1134788999999999886543
No 132
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.09 E-value=2.3e-10 Score=115.99 Aligned_cols=127 Identities=13% Similarity=0.138 Sum_probs=90.4
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---------CCeEEEEeCCCCCCC--CCCCceEE
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---------IPSTLGVLGTKRLPY--PSRSFELA 283 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---------~~~~~~~~d~~~lpf--~d~sFDlV 283 (522)
.+.+|||||||+|.++..+++.. ....+...|+++.+++.|+++. .++.+...|...++. ++++||+|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 34789999999999999998751 2235666788888888887653 467888888766543 46889999
Q ss_pred Eeccccccchhhh----HHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q 009946 284 HCSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 347 (522)
Q Consensus 284 v~s~~~l~~~~d~----~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~ 347 (522)
++.. ..++.+.. ..+++++.|+|||||.+++.....+.. ......+.+.+++.||..+.
T Consensus 174 i~d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~~~~l~~~GF~~v~ 236 (304)
T 3bwc_A 174 IIDT-TDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLD----LELIEKMSRFIRETGFASVQ 236 (304)
T ss_dssp EEEC-C---------CCHHHHHHHHHHEEEEEEEEEEECCTTTC----HHHHHHHHHHHHHHTCSEEE
T ss_pred EECC-CCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc----hHHHHHHHHHHHhCCCCcEE
Confidence 9754 34433222 579999999999999999987654321 22355677888999997654
No 133
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.09 E-value=2.2e-10 Score=115.92 Aligned_cols=97 Identities=8% Similarity=0.098 Sum_probs=74.6
Q ss_pred CCCCeEEEECCCCchHHHHH-hhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEeCCCCCCCCCCCceEEEecc
Q 009946 214 GNIRNVLDVGCGVASFGAYL-LSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVLGTKRLPYPSRSFELAHCSR 287 (522)
Q Consensus 214 ~~~~~VLDIGCGtG~~a~~L-a~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~d~~~lpf~d~sFDlVv~s~ 287 (522)
..+.+|||||||+|.++..+ +.. .+..+.+.|+++.+++.|+++ + .++.+..+|+.+++ +++||+|++..
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~--~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a 196 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHV--YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAA 196 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHT--TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECT
T ss_pred CCcCEEEEECCCccHHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECC
Confidence 45688999999999776544 432 245566667777777777655 4 36889999988775 68999999754
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
. .++...++.++.|+|||||++++...
T Consensus 197 -~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 197 -L---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp -T---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred -C---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 2 46778999999999999999999774
No 134
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.09 E-value=6.3e-10 Score=114.35 Aligned_cols=131 Identities=18% Similarity=0.153 Sum_probs=89.1
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
+..+|||||||+|.++..++++. ..+.+...|+ +.+++.|+++ +. ++.+...|..+ +++. .||+|+++.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~- 257 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSF- 257 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEES-
T ss_pred cCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcc-
Confidence 34789999999999999988652 1223334454 4455555443 33 58888888754 4443 499999988
Q ss_pred cccchhhh--HHHHHHHHHhCCCCeEEEEEeCC-CCC-CChhH---HH------------HHHHHHHHHHhcCcEEEEEe
Q 009946 289 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPE-AYA-HDPEN---RR------------IWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 289 ~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P~-~~~-~~~e~---~~------------~~~~l~~l~~~~g~~~v~~~ 349 (522)
++|+.++. ..+|+++.++|||||++++.++. ... ..... .. ..+++.++++++||++++..
T Consensus 258 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 337 (360)
T 1tw3_A 258 VLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVR 337 (360)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEE
Confidence 57666655 47999999999999999998765 211 10000 00 12478889999999988655
Q ss_pred c
Q 009946 350 D 350 (522)
Q Consensus 350 ~ 350 (522)
.
T Consensus 338 ~ 338 (360)
T 1tw3_A 338 Q 338 (360)
T ss_dssp E
T ss_pred e
Confidence 4
No 135
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.08 E-value=3.4e-10 Score=115.99 Aligned_cols=130 Identities=10% Similarity=0.109 Sum_probs=87.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHH----cCC--CeEEEEeCCCCCC-CCCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALE----RGI--PSTLGVLGTKRLP-YPSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~----rg~--~~~~~~~d~~~lp-f~d~sFDlVv~s~~ 288 (522)
..+|||||||+|.++..++++. ....+...|+ +.+++.+++ .+. ++.+..+|..+.+ +..+.||+|+++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~- 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND- 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES-
T ss_pred CCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec-
Confidence 5789999999999999998641 1122333344 233344333 233 4888888987765 1335699999988
Q ss_pred cccchhhh--HHHHHHHHHhCCCCeEEEEEeCCCCC--CChhH----------------HHHHHHHHHHHHhcCcEEEEE
Q 009946 289 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYA--HDPEN----------------RRIWNAMYDLLKSMCWKIVSK 348 (522)
Q Consensus 289 ~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P~~~~--~~~e~----------------~~~~~~l~~l~~~~g~~~v~~ 348 (522)
++|+.++. ..+|+++.++|||||++++.++.... ..... ....+++.++++++||++++.
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 57766654 78999999999999999997742111 00000 011346889999999999874
No 136
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.08 E-value=1.4e-10 Score=122.04 Aligned_cols=119 Identities=13% Similarity=0.094 Sum_probs=83.7
Q ss_pred CCccHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCccc-ccCcccccHHHHHHHHH--------
Q 009946 188 FHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAM-SLAPNDVHENQIQFALE-------- 258 (522)
Q Consensus 188 F~~ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~-------- 258 (522)
|.......+..+.+.+.+. ...+|||||||+|.++..++... +. .+.++|+++.+++.|++
T Consensus 154 YGEt~~~~i~~il~~l~l~--------~gd~VLDLGCGtG~l~l~lA~~~--g~~kVvGIDiS~~~lelAr~n~e~frkr 223 (438)
T 3uwp_A 154 YGETSFDLVAQMIDEIKMT--------DDDLFVDLGSGVGQVVLQVAAAT--NCKHHYGVEKADIPAKYAETMDREFRKW 223 (438)
T ss_dssp GGGTHHHHHHHHHHHHCCC--------TTCEEEEESCTTSHHHHHHHHHC--CCSEEEEEECCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCC--------CCCEEEEeCCCCCHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 4444555566666666533 34789999999999998887531 11 24444555555554433
Q ss_pred ---cC---CCeEEEEeCCCCCCCCC--CCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 259 ---RG---IPSTLGVLGTKRLPYPS--RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 259 ---rg---~~~~~~~~d~~~lpf~d--~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
.+ .++.+..+|+.++++++ ..||+|+++. .+ |.++....|.++.|+|||||+|+++.+
T Consensus 224 ~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn-~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 224 MKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNN-FA-FGPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp HHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECC-TT-CCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred HHHhCCCCCCeEEEECcccCCccccccCCccEEEEcc-cc-cCchHHHHHHHHHHcCCCCcEEEEeec
Confidence 23 46889999999988754 4799999865 33 457788899999999999999998764
No 137
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.07 E-value=7.7e-10 Score=108.32 Aligned_cols=128 Identities=10% Similarity=0.090 Sum_probs=80.8
Q ss_pred CCCeEEEECCCCchHHHHHhhC-----CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC---CCCCCceEEEec
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP---YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~-----~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp---f~d~sFDlVv~s 286 (522)
+..+|||+|||+|.++..+++. .|+++|+++.++. .+++.++++ .++.+..+|+.... ...++||+|++.
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~-~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVR-ELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHH-HHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHH-HHHHHhhhc-CCeEEEEcccccchhhhccccceEEEEec
Confidence 4578999999999999988864 3555544443221 224455554 57888888876532 124689999976
Q ss_pred cccccchhhhHH-HHHHHHHhCCCCeEEEEEeCCCC---CCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 287 RCRIDWLQRDGI-LLLELDRLLRPGGYFVYSSPEAY---AHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 287 ~~~l~~~~d~~~-~L~ei~RvLkPGG~lvis~P~~~---~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
.. . ++... ++..+.++|||||+|+++..... ...++ ..+++....+++.||++++..+
T Consensus 154 ~a-~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~--e~~~~~~~~L~~~gf~~~~~~~ 215 (232)
T 3id6_C 154 IA-Q---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPK--EIYKTEVEKLENSNFETIQIIN 215 (232)
T ss_dssp CC-C---TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSS--SSTTHHHHHHHHTTEEEEEEEE
T ss_pred CC-C---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHH--HHHHHHHHHHHHCCCEEEEEec
Confidence 52 2 34433 45566779999999999864321 11111 1234455667788999887654
No 138
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.07 E-value=3.2e-10 Score=116.75 Aligned_cols=96 Identities=19% Similarity=0.196 Sum_probs=71.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHH----cC--CCeEEEEeCCCCCCCCCCCceEEEeccc-
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALE----RG--IPSTLGVLGTKRLPYPSRSFELAHCSRC- 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~----rg--~~~~~~~~d~~~lpf~d~sFDlVv~s~~- 288 (522)
..+|||||||+|.++..++++. +..+.+.|+++ +++.|++ .+ .++.+..+|+.++++++++||+|++...
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred CCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 4689999999999999998752 11333444443 4444443 34 4688999999999998889999997541
Q ss_pred -cccchhhhHHHHHHHHHhCCCCeEEE
Q 009946 289 -RIDWLQRDGILLLELDRLLRPGGYFV 314 (522)
Q Consensus 289 -~l~~~~d~~~~L~ei~RvLkPGG~lv 314 (522)
.+.+..+...++.++.|+|||||.++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 24455666789999999999999998
No 139
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.07 E-value=6.4e-10 Score=110.45 Aligned_cols=136 Identities=12% Similarity=0.091 Sum_probs=92.4
Q ss_pred cHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEE
Q 009946 191 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTL 265 (522)
Q Consensus 191 ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~ 265 (522)
..+...+.+.+.+. ....+|||+|||+|.++..++... ....+.+.|+++.+++.|+++ +. ++.+
T Consensus 94 ~te~l~~~~l~~~~---------~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~ 163 (276)
T 2b3t_A 94 DTECLVEQALARLP---------EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHI 163 (276)
T ss_dssp THHHHHHHHHHHSC---------SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEE
T ss_pred hHHHHHHHHHHhcc---------cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEE
Confidence 34555555555543 123689999999999999988541 233555667777777776654 43 5788
Q ss_pred EEeCCCCCCCCCCCceEEEeccc------------cccch------------hhhHHHHHHHHHhCCCCeEEEEEeCCCC
Q 009946 266 GVLGTKRLPYPSRSFELAHCSRC------------RIDWL------------QRDGILLLELDRLLRPGGYFVYSSPEAY 321 (522)
Q Consensus 266 ~~~d~~~lpf~d~sFDlVv~s~~------------~l~~~------------~d~~~~L~ei~RvLkPGG~lvis~P~~~ 321 (522)
...|.... +++++||+|+++.. +++|. .....++.++.++|||||++++..+...
T Consensus 164 ~~~d~~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 242 (276)
T 2b3t_A 164 LQSDWFSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQ 242 (276)
T ss_dssp ECCSTTGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSC
T ss_pred EEcchhhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchH
Confidence 88886553 44578999998631 12221 2346789999999999999999764321
Q ss_pred CCChhHHHHHHHHHHHHHhcCcEEE
Q 009946 322 AHDPENRRIWNAMYDLLKSMCWKIV 346 (522)
Q Consensus 322 ~~~~e~~~~~~~l~~l~~~~g~~~v 346 (522)
-+++.+++++.||..+
T Consensus 243 ---------~~~~~~~l~~~Gf~~v 258 (276)
T 2b3t_A 243 ---------GEAVRQAFILAGYHDV 258 (276)
T ss_dssp ---------HHHHHHHHHHTTCTTC
T ss_pred ---------HHHHHHHHHHCCCcEE
Confidence 3467788888998644
No 140
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.07 E-value=5.1e-10 Score=110.67 Aligned_cols=117 Identities=20% Similarity=0.214 Sum_probs=83.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc-----C---CCeEEEEeCCCCCCCCCCCceEEEecc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-----G---IPSTLGVLGTKRLPYPSRSFELAHCSR 287 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r-----g---~~~~~~~~d~~~lpf~d~sFDlVv~s~ 287 (522)
..+|||+|||+|.++..++.....+..+.+.|+++.+++.|+++ + .++.+...|+...++++++||+|++.
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~- 178 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLD- 178 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEE-
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEEC-
Confidence 46899999999999999886411123455556777777766554 3 46888888988888878899999963
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHh-cCcEEE
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKS-MCWKIV 346 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~-~g~~~v 346 (522)
.+++..++.++.++|+|||++++..|.. ....++...+++ .+|...
T Consensus 179 -----~~~~~~~l~~~~~~L~pgG~l~~~~~~~--------~~~~~~~~~l~~~~~f~~~ 225 (280)
T 1i9g_A 179 -----MLAPWEVLDAVSRLLVAGGVLMVYVATV--------TQLSRIVEALRAKQCWTEP 225 (280)
T ss_dssp -----SSCGGGGHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHHSSBCCC
T ss_pred -----CcCHHHHHHHHHHhCCCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcCCc
Confidence 2355579999999999999999988753 112334444444 677544
No 141
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.07 E-value=4.5e-10 Score=109.51 Aligned_cols=120 Identities=14% Similarity=0.197 Sum_probs=87.7
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-C-eEEEEeCCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-P-STLGVLGTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~-~~~~~~d~~~lpf~d~sFDlVv~s~~ 288 (522)
...+|||+|||+|.++..++..-..+..+.+.|+++.+++.|+++ +. + +.+...|..+. +++++||+|++.
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~-- 169 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILD-- 169 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEEC--
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEEC--
Confidence 347899999999999999886511133555667777777777655 43 3 78888887654 677889999963
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcC--cEEEEEe
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC--WKIVSKK 349 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g--~~~v~~~ 349 (522)
.+++..++.++.++|||||.+++..|.. ....++.+.+++.| |..++..
T Consensus 170 ----~~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 170 ----LPQPERVVEHAAKALKPGGFFVAYTPCS--------NQVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp ----SSCGGGGHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHTGGGBSCCEEE
T ss_pred ----CCCHHHHHHHHHHHcCCCCEEEEEECCH--------HHHHHHHHHHHHcCCCccccEEE
Confidence 2455678999999999999999987653 22456677788888 8655433
No 142
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.06 E-value=2.3e-10 Score=118.69 Aligned_cols=129 Identities=14% Similarity=0.014 Sum_probs=92.5
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchh
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~ 294 (522)
...+|||||||+|.++..++++. ..+.+...|+ +.+++.|++. .++.+..+|..+ ++++ ||+|+++. ++|+.+
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~-~lh~~~ 281 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKA-VCHNWS 281 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEES-SGGGSC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEec-ccccCC
Confidence 45789999999999999998762 1234455577 6777666543 458888888876 6664 99999988 578777
Q ss_pred hhH--HHHHHHHHhCCCCeEEEEEe---CCCCCCC-----hhHHH------------HHHHHHHHHHhcCcEEEEEec
Q 009946 295 RDG--ILLLELDRLLRPGGYFVYSS---PEAYAHD-----PENRR------------IWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 295 d~~--~~L~ei~RvLkPGG~lvis~---P~~~~~~-----~e~~~------------~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+.. .+|+++.++|||||++++.+ |...... ..... ..+++.++++++||+.++...
T Consensus 282 d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 282 DEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 776 89999999999999999885 2221110 00000 123778899999998876543
No 143
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.06 E-value=2.9e-10 Score=117.46 Aligned_cols=98 Identities=14% Similarity=0.186 Sum_probs=72.2
Q ss_pred CCeEEEECCCCchHHHHHhhC---CCcccccCcccccHHHHHHHHHcCCC--eEEEEeCCCCCCCCCCCceEEEeccc--
Q 009946 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIP--STLGVLGTKRLPYPSRSFELAHCSRC-- 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~---~v~gvdis~~Dis~a~i~~A~~rg~~--~~~~~~d~~~lpf~d~sFDlVv~s~~-- 288 (522)
..+|||||||+|.++..++++ .|+++|+++ .+. .+.+.++..+.. +.+..+|+.++++++++||+|++...
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~-~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISD-YAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHH-HHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHH-HHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 468999999999999999876 345555442 221 222233333443 89999999999999899999998541
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEE
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVY 315 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi 315 (522)
.+++......++.++.|+|||||.++.
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 244456778899999999999999974
No 144
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.06 E-value=1.2e-09 Score=109.18 Aligned_cols=129 Identities=12% Similarity=0.047 Sum_probs=84.5
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccc-cHHHHHHHHHcC---------------CCeEEEEeCCCCCC--C--
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDV-HENQIQFALERG---------------IPSTLGVLGTKRLP--Y-- 275 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Di-s~a~i~~A~~rg---------------~~~~~~~~d~~~lp--f-- 275 (522)
..+|||||||+|.++..++... ...+.+.|+ ++.+++.|+++. .++.+...+..+.. +
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~--~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAG--ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTT--CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcC--CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 4689999999999999888752 124555566 566666665432 13555544432211 1
Q ss_pred --CCCCceEEEeccccccchhhhHHHHHHHHHhCC---C--CeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcC-cEEEE
Q 009946 276 --PSRSFELAHCSRCRIDWLQRDGILLLELDRLLR---P--GGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC-WKIVS 347 (522)
Q Consensus 276 --~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLk---P--GG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g-~~~v~ 347 (522)
++++||+|+++. ++++.++...++.++.++|+ | ||.++++........ .....++.+.+++.| |++..
T Consensus 158 ~~~~~~fD~Ii~~d-vl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~---~~~~~~~~~~l~~~G~f~v~~ 233 (281)
T 3bzb_A 158 CTGLQRFQVVLLAD-LLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHL---AERDLAFFRLVNADGALIAEP 233 (281)
T ss_dssp HHSCSSBSEEEEES-CCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------CTHHHHHHHHSTTEEEEE
T ss_pred hccCCCCCEEEEeC-cccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeeccc---chhHHHHHHHHHhcCCEEEEE
Confidence 357899999887 47778888999999999999 9 999877653321110 011234556788899 98876
Q ss_pred Eec
Q 009946 348 KKD 350 (522)
Q Consensus 348 ~~~ 350 (522)
...
T Consensus 234 ~~~ 236 (281)
T 3bzb_A 234 WLS 236 (281)
T ss_dssp EEC
T ss_pred ecc
Confidence 543
No 145
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.06 E-value=5.7e-10 Score=115.88 Aligned_cols=130 Identities=11% Similarity=-0.019 Sum_probs=91.0
Q ss_pred CCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccch
Q 009946 214 GNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (522)
Q Consensus 214 ~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~ 293 (522)
....+|||||||+|.++..|+++. ..+.+...|+ +.+++.+++. .++.+..+|+.+ +++++ |+|+++. ++|+.
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~-vlh~~ 274 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKW-ICHDW 274 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEES-CGGGB
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEec-hhhcC
Confidence 345789999999999999998752 2234455566 6666665543 568899999776 77754 9999988 46655
Q ss_pred hhh--HHHHHHHHHhCCCCeEEEEEeCCCCC---CChh-------HHH-----------HHHHHHHHHHhcCcEEEEEec
Q 009946 294 QRD--GILLLELDRLLRPGGYFVYSSPEAYA---HDPE-------NRR-----------IWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 294 ~d~--~~~L~ei~RvLkPGG~lvis~P~~~~---~~~e-------~~~-----------~~~~l~~l~~~~g~~~v~~~~ 350 (522)
++. ..+|++++++|||||++++.+..... .... +.. .-+++.++++++||+.++...
T Consensus 275 ~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 354 (368)
T 3reo_A 275 SDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVAS 354 (368)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEE
Confidence 544 47899999999999999998743211 1100 000 123688999999999886544
No 146
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.05 E-value=2.7e-11 Score=113.83 Aligned_cols=136 Identities=13% Similarity=0.003 Sum_probs=79.1
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEe
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVL 268 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~ 268 (522)
+.+.+.+.+.+.. ..+..+|||+|||+|.++..++... .+..+.+.|+++.+++.|+++ +.++.+..+
T Consensus 15 ~~~~~~~~~~l~~-------~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 86 (215)
T 4dzr_A 15 EVLVEEAIRFLKR-------MPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAA 86 (215)
T ss_dssp HHHHHHHHHHHTT-------CCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------CCHH
T ss_pred HHHHHHHHHHhhh-------cCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEc
Confidence 4455556665542 1345789999999999999998751 233555556666666666554 224566666
Q ss_pred CCCCCCCCC-----CCceEEEeccccccchhh--------------------------hHHHHHHHHHhCCCCeE-EEEE
Q 009946 269 GTKRLPYPS-----RSFELAHCSRCRIDWLQR--------------------------DGILLLELDRLLRPGGY-FVYS 316 (522)
Q Consensus 269 d~~~lpf~d-----~sFDlVv~s~~~l~~~~d--------------------------~~~~L~ei~RvLkPGG~-lvis 316 (522)
|..+ ++++ ++||+|+++.. .+...+ ...++.++.++|||||+ +++.
T Consensus 87 d~~~-~~~~~~~~~~~fD~i~~npp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 87 DGIE-WLIERAERGRPWHAIVSNPP-YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHH-HHHHHHHTTCCBSEEEECCC-CCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred chHh-hhhhhhhccCcccEEEECCC-CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 6555 4554 89999998532 111110 16788999999999999 5655
Q ss_pred eCCCCCCChhHHHHHHHHHHHHH--hcCcEEEE
Q 009946 317 SPEAYAHDPENRRIWNAMYDLLK--SMCWKIVS 347 (522)
Q Consensus 317 ~P~~~~~~~e~~~~~~~l~~l~~--~~g~~~v~ 347 (522)
.+... .+.+.++++ +.||..+.
T Consensus 165 ~~~~~---------~~~~~~~l~~~~~gf~~~~ 188 (215)
T 4dzr_A 165 VGHNQ---------ADEVARLFAPWRERGFRVR 188 (215)
T ss_dssp CTTSC---------HHHHHHHTGGGGGGTEECC
T ss_pred ECCcc---------HHHHHHHHHHhhcCCceEE
Confidence 54221 346777788 88886654
No 147
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.05 E-value=4.8e-10 Score=115.36 Aligned_cols=129 Identities=9% Similarity=-0.013 Sum_probs=93.1
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchh
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~ 294 (522)
...+|||||||+|.++..++++. ....+.+.|+ +.+++.|++. .++.+..+|..+ ++++ ||+|+++. ++|+.+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~-~lh~~~ 260 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKY-ILHNWT 260 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCB-TTEEEEECCTTT-CCCC--CSEEEEES-CGGGSC
T ss_pred cCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccC-CCcEEEeccccC-CCCC--ccEEEeeh-hhccCC
Confidence 34789999999999999998652 2345666677 7777776653 348888888765 5653 99999988 577777
Q ss_pred hhH--HHHHHHHHhCCC---CeEEEEEeCCCCC--CC---hhHH--------------HHHHHHHHHHHhcCcEEEEEec
Q 009946 295 RDG--ILLLELDRLLRP---GGYFVYSSPEAYA--HD---PENR--------------RIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 295 d~~--~~L~ei~RvLkP---GG~lvis~P~~~~--~~---~e~~--------------~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+.. .+|+++.++||| ||++++.++.... .. .... ...+++.++++++||+.++...
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEe
Confidence 776 899999999999 9999998753211 11 0000 1124788899999998876543
No 148
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.05 E-value=4.6e-10 Score=105.67 Aligned_cols=115 Identities=13% Similarity=0.046 Sum_probs=82.6
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
..+|||+|||+|.++..++... .+..+.+.|+++.+++.++++ +. ++.+...|...++ ++++||+|++.. +
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~--~ 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA--F 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC--S
T ss_pred CCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec--c
Confidence 3689999999999999988641 134556667777777776653 43 4788888887776 457899999653 2
Q ss_pred cchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q 009946 291 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (522)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~ 348 (522)
.+...++.++.++|+|||++++...... -+++..+.+ ||+.+..
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~~~~~---------~~~~~~~~~--g~~~~~~ 185 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALKGQMP---------EDEIALLPE--EYQVESV 185 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEESSCC---------HHHHHTSCT--TEEEEEE
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEeCCCc---------hHHHHHHhc--CCceeee
Confidence 3457899999999999999999764321 223444444 8887753
No 149
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.05 E-value=3.8e-10 Score=108.22 Aligned_cols=109 Identities=12% Similarity=0.092 Sum_probs=80.9
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC---CeEEEEeCC
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGT 270 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~---~~~~~~~d~ 270 (522)
...+.+.+.+.. .+..+|||||||+|.++..+++.. ..+.+.|+++.+++.++++.. ++.+...|.
T Consensus 57 ~~~~~~~~~~~~--------~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~ 125 (231)
T 1vbf_A 57 NLGIFMLDELDL--------HKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDG 125 (231)
T ss_dssp HHHHHHHHHTTC--------CTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG
T ss_pred HHHHHHHHhcCC--------CCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc
Confidence 344455555542 234689999999999999998762 466677888888888877632 678888887
Q ss_pred CCCCCCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 271 KRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 271 ~~lpf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
.....++++||+|++.. .++++. .++.++|||||++++..+..
T Consensus 126 ~~~~~~~~~fD~v~~~~-~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 126 TLGYEEEKPYDRVVVWA-TAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGCCGGGCCEEEEEESS-BBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred ccccccCCCccEEEECC-cHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 66333457899999887 466654 47899999999999988653
No 150
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.04 E-value=1.1e-10 Score=110.80 Aligned_cols=131 Identities=12% Similarity=0.179 Sum_probs=86.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
+.+|||+|||+|.++..++.....+ .+.+.|+++.++++++++ |....+...|.... .+.++||+|+... ++|
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k-~LH 126 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLK-MLP 126 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEET-CHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhh-HHH
Confidence 4789999999999999997652223 777778888888888765 55544555665443 3457899999777 799
Q ss_pred chhhhHHHHHHHHHhCCCCeEEEEEeC-CCCCCChhHHH-HHHHHHHHHHhcCcEEEEEe
Q 009946 292 WLQRDGILLLELDRLLRPGGYFVYSSP-EAYAHDPENRR-IWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvis~P-~~~~~~~e~~~-~~~~l~~l~~~~g~~~v~~~ 349 (522)
++++.+..+.++.+.|||||.|+-... ....+...... ....+++.+.+-.|.+.+.+
T Consensus 127 lL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~ 186 (200)
T 3fzg_A 127 VLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKV 186 (200)
T ss_dssp HHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEE
T ss_pred hhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeee
Confidence 987767778899999999998875431 11111111111 12234555655556555443
No 151
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.04 E-value=1.2e-09 Score=108.35 Aligned_cols=120 Identities=13% Similarity=0.130 Sum_probs=88.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+|||+|||+|.++..++.....+..+.+.|+++.+++.|+++ +. ++.+...|..+. +++++||+|++.
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~--- 188 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLD--- 188 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEEC---
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEEC---
Confidence 46899999999999999886511134566667777777777655 43 577888887665 666789999963
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
.+++..++.++.++|+|||.+++..+.. ....++.+.+++.||..++...
T Consensus 189 ---~~~~~~~l~~~~~~L~pgG~l~~~~~~~--------~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 189 ---VPDPWNYIDKCWEALKGGGRFATVCPTT--------NQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp ---CSCGGGTHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHSSEEEEEEEC
T ss_pred ---CcCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCceeEEEE
Confidence 2455679999999999999999988642 1245566777789998765443
No 152
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.03 E-value=2.7e-10 Score=108.12 Aligned_cols=101 Identities=12% Similarity=0.101 Sum_probs=73.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC---CeEEEEeCCCCCC--CCCCC-ceEEEe
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI---PSTLGVLGTKRLP--YPSRS-FELAHC 285 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~---~~~~~~~d~~~lp--f~d~s-FDlVv~ 285 (522)
..+|||+|||+|.++..++.+. ...+.+.|+++.+++.|+++ +. ++.+..+|+.++. +++++ ||+|++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 3689999999999999876652 12455667777777777654 43 6788888866543 23678 999998
Q ss_pred ccccccchhhhHHHHHHH--HHhCCCCeEEEEEeCCC
Q 009946 286 SRCRIDWLQRDGILLLEL--DRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 286 s~~~l~~~~d~~~~L~ei--~RvLkPGG~lvis~P~~ 320 (522)
... ++ ..+...++.++ .|+|||||.++++....
T Consensus 132 ~~~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 132 DPP-FH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCC-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCC-CC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 763 33 45567788888 67899999999987553
No 153
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.03 E-value=1.5e-10 Score=105.11 Aligned_cols=121 Identities=18% Similarity=0.205 Sum_probs=82.3
Q ss_pred CCccHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCe
Q 009946 188 FHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPS 263 (522)
Q Consensus 188 F~~ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~ 263 (522)
+....+...+.+.+.+... + ....+|||+|||+|.++..++.+. ..+.+.|+++.+++.|+++ +.++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~---~---~~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~ 90 (171)
T 1ws6_A 20 ARPSPVRLRKALFDYLRLR---Y---PRRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGLGA 90 (171)
T ss_dssp CCCCCHHHHHHHHHHHHHH---C---TTCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTCCC
T ss_pred CCCCHHHHHHHHHHHHHhh---c---cCCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCCce
Confidence 4445556666666555421 0 124689999999999999998762 2366667777777777654 4477
Q ss_pred EEEEeCCCCC-C-C--CCCCceEEEeccccccchhhhHHHHHHHH--HhCCCCeEEEEEeCCC
Q 009946 264 TLGVLGTKRL-P-Y--PSRSFELAHCSRCRIDWLQRDGILLLELD--RLLRPGGYFVYSSPEA 320 (522)
Q Consensus 264 ~~~~~d~~~l-p-f--~d~sFDlVv~s~~~l~~~~d~~~~L~ei~--RvLkPGG~lvis~P~~ 320 (522)
.+...|..+. + + ..++||+|++... ++ .+...++..+. ++|||||.++++.+..
T Consensus 91 ~~~~~d~~~~~~~~~~~~~~~D~i~~~~~-~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 91 RVVALPVEVFLPEAKAQGERFTVAFMAPP-YA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp EEECSCHHHHHHHHHHTTCCEEEEEECCC-TT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred EEEeccHHHHHHhhhccCCceEEEEECCC-Cc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 8888876552 2 1 1247999998763 33 44456677777 9999999999988654
No 154
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.03 E-value=2.9e-10 Score=104.90 Aligned_cols=132 Identities=13% Similarity=0.034 Sum_probs=88.6
Q ss_pred CeeecCCCCCCCCccHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHH
Q 009946 177 EKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFA 256 (522)
Q Consensus 177 ~~~~Fpgg~~~F~~ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A 256 (522)
..+.++.+. .+....+.+.+.+.+.+... ....+|||+|||+|.++..++.+. ...+.+.|+++.+++.|
T Consensus 14 ~~~~~~~~~-~~rp~~~~~~~~~~~~l~~~-------~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a 83 (187)
T 2fhp_A 14 RRLKALDGD-NTRPTTDKVKESIFNMIGPY-------FDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVI 83 (187)
T ss_dssp CBCCCCCCC-SSCCCCHHHHHHHHHHHCSC-------CSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHH
T ss_pred ccccCCCCC-CcCcCHHHHHHHHHHHHHhh-------cCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHH
Confidence 344454332 45556677777777776421 234689999999999999887642 23455566777777766
Q ss_pred HHc----CC--CeEEEEeCCCCC----CCCCCCceEEEeccccccchhhhHHHHHHH--HHhCCCCeEEEEEeCCC
Q 009946 257 LER----GI--PSTLGVLGTKRL----PYPSRSFELAHCSRCRIDWLQRDGILLLEL--DRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 257 ~~r----g~--~~~~~~~d~~~l----pf~d~sFDlVv~s~~~l~~~~d~~~~L~ei--~RvLkPGG~lvis~P~~ 320 (522)
+++ +. ++.+...|..+. ++++++||+|++... ++ ..+....+..+ .++|+|||.+++..+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 84 KENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPP-YA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCC-GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCC-CC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 554 33 478888886552 223578999998763 32 33445677777 89999999999988654
No 155
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.01 E-value=1.2e-09 Score=113.48 Aligned_cols=129 Identities=16% Similarity=0.048 Sum_probs=90.5
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchh
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~ 294 (522)
...+|||||||+|.++..++++. ..+.+...|+ +.+++.|++. .++.+..+|+.+ |++.+ |+|+++.+ +|+.+
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~v-lh~~~ 273 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWI-LHDWS 273 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESC-GGGSC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHH-hccCC
Confidence 45789999999999999998752 1233455566 5566655543 578999999877 77754 99999884 66554
Q ss_pred hh--HHHHHHHHHhCCCCeEEEEEeCCCCC---CChh-------HHH-----------HHHHHHHHHHhcCcEEEEEec
Q 009946 295 RD--GILLLELDRLLRPGGYFVYSSPEAYA---HDPE-------NRR-----------IWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 295 d~--~~~L~ei~RvLkPGG~lvis~P~~~~---~~~e-------~~~-----------~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+. ..+|++++++|||||++++.+..... .... +.. ..+++.++++++||+.++...
T Consensus 274 d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 352 (364)
T 3p9c_A 274 DQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTY 352 (364)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 33 57999999999999999998743211 1100 000 123688999999999886543
No 156
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.00 E-value=3.5e-09 Score=101.46 Aligned_cols=131 Identities=8% Similarity=0.044 Sum_probs=82.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc---CCCeEEEEeCCCCCC---CCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---GIPSTLGVLGTKRLP---YPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r---g~~~~~~~~d~~~lp---f~d~sFDlVv~s~~ 288 (522)
...+|||+|||+|.++..|+++.-....+.+.|+++.+++.+++. ..++.+...|+.... ...++||+|++...
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 346899999999999999886410012445556777666555443 246888888876631 12358999997542
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCC-CCChhHHHHH-HHHHHHHHhcCcEEEEEec
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAY-AHDPENRRIW-NAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~-~~~~e~~~~~-~~l~~l~~~~g~~~v~~~~ 350 (522)
.......++.++.++|||||+++++..... .......... +++..+ .+. |++++...
T Consensus 153 ---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~ 211 (227)
T 1g8a_A 153 ---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLN 211 (227)
T ss_dssp ---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEE
T ss_pred ---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEec
Confidence 222224559999999999999998753211 1111111222 356666 666 98876543
No 157
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.99 E-value=2.3e-09 Score=103.58 Aligned_cols=114 Identities=16% Similarity=0.118 Sum_probs=84.2
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+|||+|||+|.++..+++. +..+.+.|+++.+++.|+++ + .++.+...|..+..+++++||+|++..
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV-- 166 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS--
T ss_pred CCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC--
Confidence 468999999999999999876 44666677888888877764 3 357788888776543567899999632
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 347 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~ 347 (522)
+++..++.++.++|||||.+++..|.. ....++...+++. |..++
T Consensus 167 ----~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~-f~~~~ 211 (248)
T 2yvl_A 167 ----REPWHYLEKVHKSLMEGAPVGFLLPTA--------NQVIKLLESIENY-FGNLE 211 (248)
T ss_dssp ----SCGGGGHHHHHHHBCTTCEEEEEESSH--------HHHHHHHHHSTTT-EEEEE
T ss_pred ----cCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHhh-CCcce
Confidence 355678999999999999999988753 1234555555655 65544
No 158
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.99 E-value=4.2e-10 Score=103.48 Aligned_cols=118 Identities=16% Similarity=0.071 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEE
Q 009946 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTL 265 (522)
Q Consensus 192 a~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~ 265 (522)
.+...+.+.+.+... ....+|||+|||+|.++..++.+. ...+.+.|+++.+++.|+++ +. ++.+
T Consensus 15 ~~~~~~~~~~~l~~~-------~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 85 (177)
T 2esr_A 15 SDKVRGAIFNMIGPY-------FNGGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTL 85 (177)
T ss_dssp ---CHHHHHHHHCSC-------CCSCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEE
T ss_pred HHHHHHHHHHHHHhh-------cCCCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEE
Confidence 344445555555411 234689999999999999988762 23566667888888877664 32 4778
Q ss_pred EEeCCCC-CCCCCCCceEEEeccccccchhhhHHHHHHHH--HhCCCCeEEEEEeCCC
Q 009946 266 GVLGTKR-LPYPSRSFELAHCSRCRIDWLQRDGILLLELD--RLLRPGGYFVYSSPEA 320 (522)
Q Consensus 266 ~~~d~~~-lpf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~--RvLkPGG~lvis~P~~ 320 (522)
...|..+ ++..+++||+|++... .+ ......++..+. ++|+|||.+++..+..
T Consensus 86 ~~~d~~~~~~~~~~~fD~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 86 LKMEAERAIDCLTGRFDLVFLDPP-YA-KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp ECSCHHHHHHHBCSCEEEEEECCS-SH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EECcHHHhHHhhcCCCCEEEECCC-CC-cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 8777655 3433467999998752 32 234456777777 9999999999988654
No 159
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.99 E-value=1e-09 Score=114.56 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=71.7
Q ss_pred CCCeEEEECCCCchHHHHHhhC---CCcccccCcccccHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~---~v~gvdis~~Dis~a~i~~A~~rg~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
+..+|||||||+|.++..++++ .|+++|++ ..+..+ .+.++..+. .+.+..+|+.+++++ ++||+|++.. +
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a-~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~-~ 138 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHA-RALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEW-M 138 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHH-HHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECC-C
T ss_pred CCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHH-HHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcC-h
Confidence 3478999999999999999876 45555555 333222 233333444 388999999998887 8899999854 2
Q ss_pred ccch---hhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 290 IDWL---QRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 290 l~~~---~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.++. .....++.++.++|||||.+++..
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 3333 456789999999999999998643
No 160
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.96 E-value=1.5e-09 Score=111.10 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=70.6
Q ss_pred CCeEEEECCCCchHHHHHhhC---CCcccccCcccccHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCceEEEeccc--
Q 009946 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRC-- 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~---~v~gvdis~~Dis~a~i~~A~~rg~--~~~~~~~d~~~lpf~d~sFDlVv~s~~-- 288 (522)
..+|||||||+|.++..++++ .|+++|+++ .+ +.+.+.++..+. ++.+..+|+.++++++++||+|++...
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~-~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-II-EMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HH-HHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HH-HHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 368999999999999998875 355555542 22 122222333343 478899999999888889999998642
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEE
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVY 315 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi 315 (522)
.+.+......++.++.++|||||.++.
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 233445567899999999999999973
No 161
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.95 E-value=3.9e-11 Score=116.11 Aligned_cols=96 Identities=16% Similarity=0.172 Sum_probs=77.0
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+|||+|||+|.++..++.. +..+.+.|+++.+++.|+++ +. ++.+..+|+..++ ++++||+|++.. .
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~-~ 153 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSP-P 153 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECC-C
T ss_pred CCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECC-C
Confidence 468999999999999999986 35666777788877777654 43 6889999987776 567999999877 5
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEE
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYS 316 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis 316 (522)
+++..+....+.++.++|+|||.+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 154 WGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred cCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 777777666888999999999997764
No 162
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.95 E-value=8.9e-09 Score=100.82 Aligned_cols=99 Identities=17% Similarity=0.117 Sum_probs=73.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCC-CCCC--CCCceEEEec
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKR-LPYP--SRSFELAHCS 286 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~-lpf~--d~sFDlVv~s 286 (522)
..+|||||||+|..+..|++..-.+..+.+.|+++.+++.|+++ +. ++.+..+|+.+ ++.. .++||+|++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 46899999999999999987522134566667778777777665 43 57888888654 3322 3489999975
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
. ...+...++.++.++|||||++++...
T Consensus 144 ~----~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 144 A----DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp S----CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred C----chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 4 244556799999999999999998764
No 163
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.95 E-value=9.4e-10 Score=104.40 Aligned_cols=121 Identities=12% Similarity=-0.008 Sum_probs=81.3
Q ss_pred CCccHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-C
Q 009946 188 FHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-P 262 (522)
Q Consensus 188 F~~ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~ 262 (522)
+....+...+.+.+.+... ....+|||+|||+|.++..++.+. ...+.+.|+++.+++.|+++ +. +
T Consensus 34 ~rp~~~~~~~~l~~~l~~~-------~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~~~ 104 (202)
T 2fpo_A 34 LRPTTDRVRETLFNWLAPV-------IVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKAGN 104 (202)
T ss_dssp ----CHHHHHHHHHHHHHH-------HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCS
T ss_pred CCCCHHHHHHHHHHHHHhh-------cCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 3444455555555555421 023689999999999999876652 12556667777777777654 33 6
Q ss_pred eEEEEeCCCC-CCCCCCCceEEEeccccccchhhhHHHHHHHHH--hCCCCeEEEEEeCC
Q 009946 263 STLGVLGTKR-LPYPSRSFELAHCSRCRIDWLQRDGILLLELDR--LLRPGGYFVYSSPE 319 (522)
Q Consensus 263 ~~~~~~d~~~-lpf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~R--vLkPGG~lvis~P~ 319 (522)
+.+...|+.+ ++..+++||+|++... ++ ......++.++.+ +|+|||.++++...
T Consensus 105 v~~~~~D~~~~~~~~~~~fD~V~~~~p-~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 105 ARVVNSNAMSFLAQKGTPHNIVFVDPP-FR-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp EEEECSCHHHHHSSCCCCEEEEEECCS-SS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred EEEEECCHHHHHhhcCCCCCEEEECCC-CC-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 7888888665 5666678999998753 33 3455678888866 59999999998754
No 164
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.94 E-value=2.3e-09 Score=109.13 Aligned_cols=126 Identities=19% Similarity=0.109 Sum_probs=84.3
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCCCCCCceEEEecc---
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPYPSRSFELAHCSR--- 287 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf~d~sFDlVv~s~--- 287 (522)
..+|||+|||+|..+..|++..-....+.+.|+++.+++.++++ +. ++.+...|...++..+++||+|++..
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCC
Confidence 46899999999999999986421123455556777777666554 44 67888888877765457899999731
Q ss_pred --ccccchhh----------------hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q 009946 288 --CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (522)
Q Consensus 288 --~~l~~~~d----------------~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v 346 (522)
.+++..++ ...+|.++.++|||||++++++-... ..++. ..+..++++.+|+++
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~--~~Ene---~~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLE--PEENE---FVIQWALDNFDVELL 270 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCC--GGGTH---HHHHHHHHHSSEEEE
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCC--hHHhH---HHHHHHHhcCCCEEe
Confidence 12222121 14789999999999999999874332 12222 235566777888766
No 165
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.94 E-value=1.8e-09 Score=102.30 Aligned_cols=98 Identities=14% Similarity=-0.011 Sum_probs=71.3
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
..+|||||||+|.++..++...-....+.+.|+++.+++.++++ + .++.+...|.......+++||+|++.. .+
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-~~ 156 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTA-AG 156 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESS-BB
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECC-ch
Confidence 46899999999999999886421113556667777777777654 3 357788777643222357899999887 46
Q ss_pred cchhhhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 291 DWLQRDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
++.. .++.++|||||++++..+..
T Consensus 157 ~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 157 PKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp SSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred HHHH------HHHHHHcCCCcEEEEEECCC
Confidence 6654 48899999999999988653
No 166
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.94 E-value=3.6e-09 Score=109.01 Aligned_cols=122 Identities=16% Similarity=0.064 Sum_probs=84.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCCCCCCceEEEecccc-
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPYPSRSFELAHCSRCR- 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf~d~sFDlVv~s~~~- 289 (522)
..+|||+|||+|.++..++...-....+.+.|+++.+++.|+++ +. .+.+...|+.+++.+.+.||+|+++...
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg 283 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHG 283 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSC
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCc
Confidence 46799999999999988876310113445556666666666544 44 5899999999988777789999985321
Q ss_pred ------ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 290 ------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 290 ------l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
.+.......++.++.++|||||.+++.+++. +.+..+.+ .||+.....
T Consensus 284 ~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~-----------~~~~~~~~-~g~~~~~~~ 337 (354)
T 3tma_A 284 LRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP-----------ALLKRALP-PGFALRHAR 337 (354)
T ss_dssp C----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH-----------HHHHHHCC-TTEEEEEEE
T ss_pred CccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH-----------HHHHHHhh-cCcEEEEEE
Confidence 1111223679999999999999999988652 22344555 888876543
No 167
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.94 E-value=3.4e-10 Score=118.75 Aligned_cols=92 Identities=13% Similarity=0.123 Sum_probs=71.8
Q ss_pred CCeEEEECCC------CchHHHHHhhC-----CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCC------CC
Q 009946 216 IRNVLDVGCG------VASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP------SR 278 (522)
Q Consensus 216 ~~~VLDIGCG------tG~~a~~La~~-----~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~------d~ 278 (522)
..+||||||| +|..+..++.+ .|+++|+++.+ . ....++.+.++|..++++. ++
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m-----~----~~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS-----H----VDELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG-----G----GCBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH-----h----hcCCCcEEEEecccccchhhhhhcccC
Confidence 4789999999 66666665532 46666666543 1 2346789999999998877 68
Q ss_pred CceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 279 SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 279 sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
+||+|+|.. .|+..+...+|.++.|+|||||+|++.+.
T Consensus 288 sFDlVisdg--sH~~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 288 PFDIVIDDG--SHINAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp CEEEEEECS--CCCHHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred CccEEEECC--cccchhHHHHHHHHHHhcCCCeEEEEEec
Confidence 999999764 46677888999999999999999999874
No 168
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.94 E-value=2.2e-09 Score=110.69 Aligned_cols=127 Identities=9% Similarity=0.005 Sum_probs=90.3
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchhh
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d 295 (522)
..+|||||||+|.++..++++. ..+.+...|+ +.+++.+++. .++.+..+|..+ +++ +||+|+++. ++|+.++
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~-vlh~~~d 266 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKW-VLHDWND 266 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEES-CGGGSCH
T ss_pred CCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcc-cccCCCH
Confidence 4689999999999999998752 1234455566 4666555442 358888888776 666 499999988 5777777
Q ss_pred hH--HHHHHHHHhCCC---CeEEEEEeCCCCC--CC---hhHHH---------------HHHHHHHHHHhcCcEEEEEe
Q 009946 296 DG--ILLLELDRLLRP---GGYFVYSSPEAYA--HD---PENRR---------------IWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 296 ~~--~~L~ei~RvLkP---GG~lvis~P~~~~--~~---~e~~~---------------~~~~l~~l~~~~g~~~v~~~ 349 (522)
.. .+|+++.++||| ||++++.++.... .. ..... ..+++.++++++||+.++..
T Consensus 267 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 345 (358)
T 1zg3_A 267 EQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKIT 345 (358)
T ss_dssp HHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEE
Confidence 66 899999999999 9999997742111 11 01000 12377889999999887654
No 169
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.94 E-value=1.4e-09 Score=104.24 Aligned_cols=101 Identities=15% Similarity=0.154 Sum_probs=72.5
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCC-CCC-C----CCCceEE
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKR-LPY-P----SRSFELA 283 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~-lpf-~----d~sFDlV 283 (522)
..+|||||||+|.++..|+..--.+..+.+.|+++.+++.|+++ +. ++.+..+|+.+ ++. + .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 46899999999999999987421234566667777777777654 43 47888888533 332 1 2689999
Q ss_pred EeccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
++.. ..++..+...++.++ ++|||||.+++...
T Consensus 139 ~~d~-~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 139 FLDH-WKDRYLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp EECS-CGGGHHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEcC-CcccchHHHHHHHhc-cccCCCeEEEEeCC
Confidence 9776 355555555678888 99999999998653
No 170
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.93 E-value=1.8e-09 Score=101.21 Aligned_cols=91 Identities=12% Similarity=0.155 Sum_probs=66.7
Q ss_pred CCeEEEECCCCchHHHHHhhC------CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC---------------
Q 009946 216 IRNVLDVGCGVASFGAYLLSH------DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------------- 274 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~------~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp--------------- 274 (522)
..+|||+|||+|.++..++++ .++++|+++.. ...++.+..+|+...+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~ 91 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNN 91 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC-----------
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhccccccccccc
Confidence 368999999999999998754 35666665521 1235778888887776
Q ss_pred ----------CCCCCceEEEeccccccch----hhh-------HHHHHHHHHhCCCCeEEEEEeC
Q 009946 275 ----------YPSRSFELAHCSRCRIDWL----QRD-------GILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 275 ----------f~d~sFDlVv~s~~~l~~~----~d~-------~~~L~ei~RvLkPGG~lvis~P 318 (522)
+++++||+|+|.. .+++. .+. ..++.++.++|||||.|++...
T Consensus 92 ~~~~~~~~~~~~~~~fD~v~~~~-~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 92 NSVDYKLKEILQDKKIDIILSDA-AVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECC-CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhHHHHHhhcCCCcccEEEeCC-CcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 5667999999876 34442 222 2378999999999999998663
No 171
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.92 E-value=1.4e-08 Score=104.93 Aligned_cols=131 Identities=15% Similarity=0.084 Sum_probs=91.2
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc-----CCCeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r-----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
...+|||||||+|.++..++++.. .+.+...|. +.+++.|+++ ..++.+..+|+...|.+ .+|+|++...
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~v- 253 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARV- 253 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESS-
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeee-
Confidence 447899999999999999987621 223333454 5566777654 24688999997766655 4799999884
Q ss_pred ccchhhh--HHHHHHHHHhCCCCeEEEEEeCCCC--CCChhHHH---------------HHHHHHHHHHhcCcEEEEEec
Q 009946 290 IDWLQRD--GILLLELDRLLRPGGYFVYSSPEAY--AHDPENRR---------------IWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 290 l~~~~d~--~~~L~ei~RvLkPGG~lvis~P~~~--~~~~e~~~---------------~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+|+.+|. ..+|+++++.|+|||+++|.+.-.. ...+.... ..++++++++++||+.++...
T Consensus 254 lh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~ 333 (353)
T 4a6d_A 254 LHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKK 333 (353)
T ss_dssp GGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 6655554 5689999999999999999874211 11111111 124788999999999887543
No 172
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.92 E-value=2e-09 Score=104.03 Aligned_cols=97 Identities=16% Similarity=0.128 Sum_probs=70.4
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC---CeEEEEeCCCCC-C-CCCCCceEEEecc
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI---PSTLGVLGTKRL-P-YPSRSFELAHCSR 287 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~---~~~~~~~d~~~l-p-f~d~sFDlVv~s~ 287 (522)
.+|||||||+|..+..|+..--.+..+...|+++.+++.|+++ +. ++.+..+|+.++ + +++++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 4899999999999999987421234555667777777776654 43 478888775443 2 3368899999654
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ..+...++.++.++|||||.+++..
T Consensus 138 ~----~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 138 S----PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp C----TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred c----HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 2 3345679999999999999999854
No 173
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.92 E-value=3.3e-09 Score=107.27 Aligned_cols=105 Identities=16% Similarity=0.196 Sum_probs=71.6
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----------CCCeEEEEeCCCCC-CCCCCCceEE
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----------GIPSTLGVLGTKRL-PYPSRSFELA 283 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----------g~~~~~~~~d~~~l-pf~d~sFDlV 283 (522)
++++|||||||+|.++..++++. ....++..|+++.+++.|++. ..++.+..+|.... ...+++||+|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 35789999999999999998751 123455556667777777654 23678888886553 4456789999
Q ss_pred Eeccccccchhhh----HHHHHHHHHhCCCCeEEEEEeCCCC
Q 009946 284 HCSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAY 321 (522)
Q Consensus 284 v~s~~~l~~~~d~----~~~L~ei~RvLkPGG~lvis~P~~~ 321 (522)
++.. ..++.+.. ..+++++.++|||||.+++.....+
T Consensus 162 i~D~-~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~ 202 (294)
T 3adn_A 162 ISDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECS
T ss_pred EECC-CCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcc
Confidence 9744 23332221 6799999999999999999764433
No 174
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.91 E-value=2e-09 Score=109.36 Aligned_cols=97 Identities=12% Similarity=0.015 Sum_probs=72.2
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
..+|||||||+|.++..+++.......+.+.|+++.+++.|+++ +. ++.+...|..+.+.++++||+|++.. .+
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~-~~ 154 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTV-GV 154 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECS-BB
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcC-CH
Confidence 46899999999999999986511112355556777777776654 43 47888888877655567899999887 46
Q ss_pred cchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 291 DWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+++. .++.++|||||.+++....
T Consensus 155 ~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 155 DEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp SCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred HHHH------HHHHHhcCCCcEEEEEECC
Confidence 6654 5788999999999998643
No 175
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.91 E-value=5e-09 Score=102.18 Aligned_cols=100 Identities=15% Similarity=0.185 Sum_probs=70.6
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc------------C-CCeEEEEeCCCC-CC--CCCCC
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER------------G-IPSTLGVLGTKR-LP--YPSRS 279 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r------------g-~~~~~~~~d~~~-lp--f~d~s 279 (522)
..+|||||||+|.++..++... ....+.+.|+++.+++.|+++ + .++.+..+|+.+ ++ +++++
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4679999999999999998652 123455556666666665432 3 368888898776 66 77889
Q ss_pred ceEEEeccccccchhh--------hHHHHHHHHHhCCCCeEEEEEe
Q 009946 280 FELAHCSRCRIDWLQR--------DGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 280 FDlVv~s~~~l~~~~d--------~~~~L~ei~RvLkPGG~lvis~ 317 (522)
||.|+.... -.|... ...++.++.++|+|||.|++.+
T Consensus 129 ~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 129 LSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 999985431 122110 0479999999999999999965
No 176
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.91 E-value=2.9e-09 Score=109.48 Aligned_cols=126 Identities=10% Similarity=0.049 Sum_probs=86.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC---CeEEEEeCCCCCCC----CCCCceEEE
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI---PSTLGVLGTKRLPY----PSRSFELAH 284 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~---~~~~~~~d~~~lpf----~d~sFDlVv 284 (522)
..+|||+|||+|.++..++.. +..+.+.|+++.+++.|+++ +. ++.+...|+.++.. ..++||+|+
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 468999999999999999876 22566667777777777654 43 37888888655431 146899999
Q ss_pred eccc---------cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q 009946 285 CSRC---------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (522)
Q Consensus 285 ~s~~---------~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v 346 (522)
+... +.++..+...++.++.++|+|||.|++..........+ ...+.+.+.++++|+++.
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~--~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFY--SMHELMRETMRGAGGVVA 299 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHH--HHHHHHHHHTTTSCSEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHH--HHHHHHHHHHHHcCCeEE
Confidence 8321 22345566789999999999999988877544322221 223345556678888765
No 177
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.89 E-value=3e-09 Score=113.13 Aligned_cols=102 Identities=8% Similarity=0.001 Sum_probs=68.9
Q ss_pred CCCeEEEECCCCchHHHHHhhC----CCcccccCcccccHH--HHHHHHHc----C---CCeEEEEeCCCCC--CC--CC
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHEN--QIQFALER----G---IPSTLGVLGTKRL--PY--PS 277 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~----~v~gvdis~~Dis~a--~i~~A~~r----g---~~~~~~~~d~~~l--pf--~d 277 (522)
...+|||||||+|.++..++.. .|+|+|+++..+..+ |++.++++ | .++.+..+|.... ++ ..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~ 321 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELI 321 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHG
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccccc
Confidence 3478999999999999998864 355555544333222 22222433 4 3577777654322 22 24
Q ss_pred CCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 278 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 278 ~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
++||+|+++.. + +.++...+|.++.++|||||.+++..+
T Consensus 322 ~~FDvIvvn~~-l-~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 322 PQCDVILVNNF-L-FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp GGCSEEEECCT-T-CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred CCCCEEEEeCc-c-ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 68999998763 3 456777889999999999999998753
No 178
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.89 E-value=3.2e-09 Score=109.42 Aligned_cols=114 Identities=15% Similarity=0.146 Sum_probs=76.5
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhC---CCcccccCcccccHHHHHHHHHcC--CCeEEEE
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGV 267 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~v~gvdis~~Dis~a~i~~A~~rg--~~~~~~~ 267 (522)
..|.+.+.+.+.. .+..+|||||||+|.++..++++ .|+++|+++ ++ ....+.++..+ .++.+..
T Consensus 36 ~~y~~~i~~~l~~--------~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~-~~a~~~~~~~~l~~~v~~~~ 105 (348)
T 2y1w_A 36 GTYQRAILQNHTD--------FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MA-QHAEVLVKSNNLTDRIVVIP 105 (348)
T ss_dssp HHHHHHHHHTGGG--------TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HH-HHHHHHHHHTTCTTTEEEEE
T ss_pred HHHHHHHHhcccc--------CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HH-HHHHHHHHHcCCCCcEEEEE
Confidence 3455555555442 23468999999999999998875 355555542 22 22222233334 3588999
Q ss_pred eCCCCCCCCCCCceEEEeccccccch-hhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 268 LGTKRLPYPSRSFELAHCSRCRIDWL-QRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 268 ~d~~~lpf~d~sFDlVv~s~~~l~~~-~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.|..+++++ ++||+|++.....++. ++....+.++.++|||||.+++..
T Consensus 106 ~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 106 GKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp SCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred cchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 999888776 6799999876433333 334578889999999999998654
No 179
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.88 E-value=1.6e-08 Score=105.33 Aligned_cols=121 Identities=15% Similarity=0.077 Sum_probs=85.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+|||+|||+|.++..++.... ...+.+.|+++.+++.|+++ +. ++.+..+|+.++++++++||+|+++...
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCC
T ss_pred CCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCC
Confidence 36799999999999999987521 11455667777777776654 54 6899999999999888899999985321
Q ss_pred ------ccchhhh-HHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 290 ------IDWLQRD-GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 290 ------l~~~~d~-~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
.+...+. ..++.++.++| ||.+++.++. .+.+++.+++.||+..+...
T Consensus 297 g~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~-----------~~~~~~~~~~~G~~~~~~~~ 351 (373)
T 3tm4_A 297 GLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE-----------KKAIEEAIAENGFEIIHHRV 351 (373)
T ss_dssp C------CCHHHHHHHHHHHHHHHE--EEEEEEEESC-----------HHHHHHHHHHTTEEEEEEEE
T ss_pred CcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC-----------HHHHHHHHHHcCCEEEEEEE
Confidence 1112222 56889999999 6666665543 23566788899999876543
No 180
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.88 E-value=3e-09 Score=106.55 Aligned_cols=103 Identities=13% Similarity=0.084 Sum_probs=73.3
Q ss_pred CCCeEEEECCCC--chHHHHHhhCCCcccccCcccccHHHHHHHHHcC-----CCeEEEEeCCCCCC----CC--CCCce
Q 009946 215 NIRNVLDVGCGV--ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-----IPSTLGVLGTKRLP----YP--SRSFE 281 (522)
Q Consensus 215 ~~~~VLDIGCGt--G~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg-----~~~~~~~~d~~~lp----f~--d~sFD 281 (522)
..++|||||||+ +.....++++......+...|.++.|+..|+++- .++.+..+|+.+++ .+ .++||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 457899999997 3344544443122346666788888988887762 14788999987752 11 34566
Q ss_pred -----EEEeccccccchhhh---HHHHHHHHHhCCCCeEEEEEeC
Q 009946 282 -----LAHCSRCRIDWLQRD---GILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 282 -----lVv~s~~~l~~~~d~---~~~L~ei~RvLkPGG~lvis~P 318 (522)
.|+++ .++||+++. ..++.++.+.|+|||+|+++..
T Consensus 158 ~~~p~av~~~-avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 158 LTRPVALTVI-AIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp TTSCCEEEEE-SCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred cCCcchHHhh-hhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEec
Confidence 45544 479999884 6799999999999999999874
No 181
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.88 E-value=9.4e-10 Score=107.39 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=68.1
Q ss_pred CeEEEECCCCchHHHHHhhC--------CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCC---CCCC-CCceEEE
Q 009946 217 RNVLDVGCGVASFGAYLLSH--------DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL---PYPS-RSFELAH 284 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~--------~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~l---pf~d-~sFDlVv 284 (522)
.+|||||||+|..+..|++. .|+++|+++.. ++.|+....++.+..+|...+ ++.+ .+||+|+
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~-----l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR-----CQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIF 157 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT-----CCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH-----HHHHhccCCceEEEECcchhHHHHHhhccCCCCEEE
Confidence 68999999999999988753 45556555544 344443345789999998774 5433 4799999
Q ss_pred eccccccchhhhHHHHHHHHH-hCCCCeEEEEEeC
Q 009946 285 CSRCRIDWLQRDGILLLELDR-LLRPGGYFVYSSP 318 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~R-vLkPGG~lvis~P 318 (522)
+... | .+...+|.++.| +|||||++++.+.
T Consensus 158 ~d~~--~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 158 IDNA--H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EESS--C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred ECCc--h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 7552 2 356779999998 9999999999653
No 182
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.88 E-value=5.9e-09 Score=107.30 Aligned_cols=106 Identities=14% Similarity=0.170 Sum_probs=76.3
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc---------CCCeEEEEeCCCCC--CCCCCCceEE
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKRL--PYPSRSFELA 283 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r---------g~~~~~~~~d~~~l--pf~d~sFDlV 283 (522)
.+++|||||||+|.++..|+++. ....+...|+++.+++.|+++ ..++.+..+|.... .+++++||+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 35789999999999999998752 234566678888888888764 23688888886543 2345789999
Q ss_pred Eecccc-ccchhh--hHHHHHHHHHhCCCCeEEEEEeCCCC
Q 009946 284 HCSRCR-IDWLQR--DGILLLELDRLLRPGGYFVYSSPEAY 321 (522)
Q Consensus 284 v~s~~~-l~~~~d--~~~~L~ei~RvLkPGG~lvis~P~~~ 321 (522)
++.... .+...+ ...++.++.++|+|||.|++.....+
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLW 239 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 975421 111121 36799999999999999999754444
No 183
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.87 E-value=4.6e-09 Score=102.49 Aligned_cols=104 Identities=12% Similarity=-0.006 Sum_probs=71.2
Q ss_pred CCCeEEEECCCCchHHHHHhhCC-CcccccCcccccHHHHHHHHHc---C----C--C----------------------
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHD-IIAMSLAPNDVHENQIQFALER---G----I--P---------------------- 262 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~-v~gvdis~~Dis~a~i~~A~~r---g----~--~---------------------- 262 (522)
...+|||+|||+|.++..++... ..+..+.+.|+++.+++.|+++ . . .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 34689999999999999887640 1234566667777777777643 1 1 1
Q ss_pred ---eE-------------EEEeCCCCCCC-----CCCCceEEEeccccccc--------hhhhHHHHHHHHHhCCCCeEE
Q 009946 263 ---ST-------------LGVLGTKRLPY-----PSRSFELAHCSRCRIDW--------LQRDGILLLELDRLLRPGGYF 313 (522)
Q Consensus 263 ---~~-------------~~~~d~~~lpf-----~d~sFDlVv~s~~~l~~--------~~d~~~~L~ei~RvLkPGG~l 313 (522)
+. +...|+..... ..++||+|+|+...+.. ......++.++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 34 78888765321 34589999987532211 123457999999999999999
Q ss_pred EEEeC
Q 009946 314 VYSSP 318 (522)
Q Consensus 314 vis~P 318 (522)
+++..
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 99543
No 184
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.86 E-value=4.5e-09 Score=101.63 Aligned_cols=109 Identities=13% Similarity=0.170 Sum_probs=75.3
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEe
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVL 268 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~ 268 (522)
.....+.+.+... +..+|||||||+|.++..+++... ..+.+.|+++.+++.|+++ +. ++.+...
T Consensus 78 ~~~~~~~~~l~~~--------~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 147 (235)
T 1jg1_A 78 HMVAIMLEIANLK--------PGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILG 147 (235)
T ss_dssp HHHHHHHHHHTCC--------TTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred HHHHHHHHhcCCC--------CCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC
Confidence 3444555555422 336799999999999999987511 3455556677777776654 32 5777777
Q ss_pred CCCCCCCCCC-CceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 269 GTKRLPYPSR-SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 269 d~~~lpf~d~-sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
|. ..+++++ .||+|++.. .+++.. .++.++|||||.+++..+..
T Consensus 148 d~-~~~~~~~~~fD~Ii~~~-~~~~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 148 DG-SKGFPPKAPYDVIIVTA-GAPKIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CG-GGCCGGGCCEEEEEECS-BBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred Cc-ccCCCCCCCccEEEECC-cHHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 76 4455544 499999877 465543 37899999999999998754
No 185
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.86 E-value=3.5e-09 Score=101.24 Aligned_cols=98 Identities=15% Similarity=0.095 Sum_probs=71.4
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C------CCeEEEEeCCCCCCCCCCCceEEE
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G------IPSTLGVLGTKRLPYPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g------~~~~~~~~d~~~lpf~d~sFDlVv 284 (522)
+..+|||||||+|.++..|++..-....+.+.|+++.+++.++++ + .++.+...|....+.++++||+|+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 346899999999999998886410112455556777777766543 2 267888888776665567899999
Q ss_pred eccccccchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+... +++ ++.++.++|||||+++++.+.
T Consensus 157 ~~~~-~~~------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 157 VGAA-APV------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp ECSB-BSS------CCHHHHHTEEEEEEEEEEESC
T ss_pred ECCc-hHH------HHHHHHHhcCCCcEEEEEEec
Confidence 8763 443 356899999999999998764
No 186
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.86 E-value=1.9e-08 Score=94.45 Aligned_cols=113 Identities=12% Similarity=0.067 Sum_probs=80.1
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchh
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~ 294 (522)
...+|||+|||+|.++..++... ...+.+.|+++.+++.|+++..++.+..+|..+++ ++||+|+++. .+++..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~-p~~~~~ 124 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNP-PFGSVV 124 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECC-CC----
T ss_pred CCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECC-Cchhcc
Confidence 34689999999999999998761 22466778888999999887557889999988875 6899999877 455554
Q ss_pred h--hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q 009946 295 R--DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (522)
Q Consensus 295 d--~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v 346 (522)
+ ...++.++.++| |+.+++..+.. +..+.++++..| ++.
T Consensus 125 ~~~~~~~l~~~~~~~--g~~~~~~~~~~----------~~~~~~~~~~~g-~~~ 165 (200)
T 1ne2_A 125 KHSDRAFIDKAFETS--MWIYSIGNAKA----------RDFLRREFSARG-DVF 165 (200)
T ss_dssp ---CHHHHHHHHHHE--EEEEEEEEGGG----------HHHHHHHHHHHE-EEE
T ss_pred CchhHHHHHHHHHhc--CcEEEEEcCch----------HHHHHHHHHHCC-CEE
Confidence 3 256899999999 55444433221 345667777887 544
No 187
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.86 E-value=8.5e-10 Score=121.19 Aligned_cols=99 Identities=18% Similarity=0.136 Sum_probs=78.5
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEeCCCCC--CCCCCCceEEEecc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVLGTKRL--PYPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~d~~~l--pf~d~sFDlVv~s~ 287 (522)
++.+|||||||.|.++..|++. |.+++++|.++.+++.|+.+ + .++.+.+.+++++ ++++++||+|+|..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 4578999999999999999987 56777778888888877654 3 5688999998887 46778999999998
Q ss_pred ccccchhhhHH--HHHHHHHhCCCCeEEEEEe
Q 009946 288 CRIDWLQRDGI--LLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 288 ~~l~~~~d~~~--~L~ei~RvLkPGG~lvis~ 317 (522)
+++|++++.. .+..+.+.|+++|..++..
T Consensus 143 -~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 143 -VFHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp -CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred -chhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 6999988753 3556777788887766554
No 188
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.86 E-value=9.2e-09 Score=102.42 Aligned_cols=98 Identities=10% Similarity=0.071 Sum_probs=72.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
+..+|||+|||+|.++..++.+. .+..+.+.|+++.+++.|+++ +. ++.+..+|+.+++. .++||+|++....
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 34689999999999999998751 122444556666666665543 43 57888889877744 5789999976531
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+...++.++.++|+|||.++++...
T Consensus 197 -----~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 197 -----KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp -----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred -----cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 4567899999999999999988743
No 189
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.85 E-value=3e-09 Score=101.83 Aligned_cols=97 Identities=15% Similarity=0.090 Sum_probs=72.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCC----cccccCcccccHHHHHHHHHc----C------CCeEEEEeCCCCCC----CCC
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDI----IAMSLAPNDVHENQIQFALER----G------IPSTLGVLGTKRLP----YPS 277 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v----~gvdis~~Dis~a~i~~A~~r----g------~~~~~~~~d~~~lp----f~d 277 (522)
..+|||||||+|.++..+++..- ....+.+.|+++.+++.|+++ + .++.+...|..... .+.
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 160 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKEL 160 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccC
Confidence 46899999999999999886421 123556667777777777654 3 36888888877655 556
Q ss_pred CCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 278 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 278 ~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
++||+|++... +++ ++.++.++|||||++++..+.
T Consensus 161 ~~fD~I~~~~~-~~~------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 161 GLFDAIHVGAS-ASE------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCEEEEEECSB-BSS------CCHHHHHHEEEEEEEEEEEEE
T ss_pred CCcCEEEECCc-hHH------HHHHHHHhcCCCcEEEEEEcc
Confidence 78999998773 544 358889999999999998754
No 190
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.85 E-value=3e-09 Score=103.00 Aligned_cols=98 Identities=11% Similarity=0.154 Sum_probs=74.1
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCC-C-CCCCCceEEEecc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRL-P-YPSRSFELAHCSR 287 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~l-p-f~d~sFDlVv~s~ 287 (522)
..+|||||||+|.++..|+.. ..+..+.+.|+++.+++.|+++ +. ++.+..+|+.+. + ..+++||+|++..
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASI-SDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTT-CTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 468999999999999999873 1245666667777777777654 43 688998887553 3 3367899999654
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
...+...++.++.++|||||+|++...
T Consensus 151 ----~~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 151 ----AKAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp ----TSSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred ----cHHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 234456799999999999999988553
No 191
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.82 E-value=4.8e-09 Score=100.08 Aligned_cols=99 Identities=19% Similarity=0.156 Sum_probs=72.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCC-C-CC----CCCceEE
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRL-P-YP----SRSFELA 283 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~l-p-f~----d~sFDlV 283 (522)
..+|||||||+|.++..|+...-.+..+.+.|+++.+++.|+++ +. ++.+..+|..+. + +. .++||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 36899999999999999987522245666667778777777654 43 378888886432 2 11 1689999
Q ss_pred EeccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
++.. ...+...++.++.++|||||++++...
T Consensus 145 ~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 145 YIDA----DKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EECS----CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EECC----CHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 9544 244567799999999999999999764
No 192
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.82 E-value=3.2e-09 Score=100.65 Aligned_cols=98 Identities=12% Similarity=0.094 Sum_probs=72.0
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCC-CCCCCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKR-LPYPSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~-lpf~d~sFDlVv~s~~ 288 (522)
..+|||||||+|..+..|+...-.+..+.+.|+++.+++.|+++ +. ++.+..+|..+ ++..++ ||+|++...
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 36899999999999999987521134566667777777777654 33 47788888654 354446 999996532
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
..+...++.++.++|||||.+++...
T Consensus 136 ----~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 136 ----VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp ----TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred ----hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 34557899999999999999998653
No 193
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.82 E-value=6.3e-09 Score=99.30 Aligned_cols=100 Identities=13% Similarity=0.066 Sum_probs=72.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCC-C-CC---CCCceEEE
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRL-P-YP---SRSFELAH 284 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~l-p-f~---d~sFDlVv 284 (522)
..+|||||||+|.++..|++..-.+..+.+.|+++.+++.|+++ +. ++.+..+|..+. + ++ .++||+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 46899999999999999987622234666777778777777654 43 478888886432 2 11 15799999
Q ss_pred eccccccchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+... ......++.++.++|||||.+++..+.
T Consensus 139 ~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 139 IDAD----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp ECSC----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 7652 334567999999999999999987653
No 194
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.82 E-value=4.5e-09 Score=104.74 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=66.0
Q ss_pred CCeEEEECCCCchHHHHHhhC-CCcccccCcccccHHHHH-H-HHHcCCCeEEE--EeCCCCCCCCCCCceEEEeccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQ-F-ALERGIPSTLG--VLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~-~v~gvdis~~Dis~a~i~-~-A~~rg~~~~~~--~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
..+|||||||+|.++..++++ .|+++|+++ +...+..+ . ....+.++.+. .+|+..++ +++||+|+|..+
T Consensus 75 g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~-- 149 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG-- 149 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC--
T ss_pred CCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc--
Confidence 468999999999999999875 677777766 22110000 0 00011256777 78888776 678999998653
Q ss_pred cch----hhhH---HHHHHHHHhCCCCe--EEEEEeC
Q 009946 291 DWL----QRDG---ILLLELDRLLRPGG--YFVYSSP 318 (522)
Q Consensus 291 ~~~----~d~~---~~L~ei~RvLkPGG--~lvis~P 318 (522)
++. .+.. .+|.++.++||||| .|++.+.
T Consensus 150 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 150 ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 222 1111 37899999999999 9998663
No 195
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.82 E-value=1.8e-08 Score=95.24 Aligned_cols=92 Identities=13% Similarity=0.036 Sum_probs=64.8
Q ss_pred CCCeEEEECCCCchHHHHHhhC--CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCC-----------CCCce
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-----------SRSFE 281 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~--~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~-----------d~sFD 281 (522)
+..+|||+|||+|.++..++++ .|+++|+++.. ...++.+..+|+.+.+.. .++||
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D 93 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVD 93 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEE
T ss_pred CCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcce
Confidence 3478999999999999999876 46666665532 123678888998776521 14899
Q ss_pred EEEeccc---cccchhh-------hHHHHHHHHHhCCCCeEEEEEe
Q 009946 282 LAHCSRC---RIDWLQR-------DGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 282 lVv~s~~---~l~~~~d-------~~~~L~ei~RvLkPGG~lvis~ 317 (522)
+|+|... .-.+..+ ...++.++.++|||||.|++..
T Consensus 94 ~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 94 DVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9997531 0111111 2468899999999999999866
No 196
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.81 E-value=2.3e-09 Score=107.52 Aligned_cols=95 Identities=16% Similarity=0.155 Sum_probs=66.9
Q ss_pred CCCeEEEECCCCchHHHHHhhC-CCcccccCcccccHHHHHHHHHc-------CCCeEEE--EeCCCCCCCCCCCceEEE
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALER-------GIPSTLG--VLGTKRLPYPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~-~v~gvdis~~Dis~a~i~~A~~r-------g~~~~~~--~~d~~~lpf~d~sFDlVv 284 (522)
+..+|||+|||+|.++..++++ .|+++|+++ +.. .++++ +.++.+. .+|+..++ +++||+|+
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~-----~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vv 153 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGT-----SGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVL 153 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCC-----TTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhh-----hhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEE
Confidence 3468999999999999999875 677777766 321 11111 1156777 78888776 67899999
Q ss_pred eccccccch----hhhH---HHHHHHHHhCCCCe--EEEEEeCC
Q 009946 285 CSRCRIDWL----QRDG---ILLLELDRLLRPGG--YFVYSSPE 319 (522)
Q Consensus 285 ~s~~~l~~~----~d~~---~~L~ei~RvLkPGG--~lvis~P~ 319 (522)
|..+ ++. .+.. .+|.++.++||||| .|++.+..
T Consensus 154 sd~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 154 CDIG--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp ECCC--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred ECCC--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 8753 222 1111 37899999999999 99986643
No 197
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.80 E-value=1.1e-08 Score=103.37 Aligned_cols=103 Identities=14% Similarity=0.057 Sum_probs=73.3
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc---------CCCeEEEEeCCCC-CCCCCCCceEEEe
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKR-LPYPSRSFELAHC 285 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r---------g~~~~~~~~d~~~-lpf~d~sFDlVv~ 285 (522)
+.+|||||||+|.++..++++. ....+...|+++.+++.|+++ ..++.+...|... ++..+++||+|++
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4789999999999999998762 124566667888888877764 2467888888544 3334578999997
Q ss_pred ccccccchh-----hhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 286 SRCRIDWLQ-----RDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 286 s~~~l~~~~-----d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
.. ..++.. ....++.++.++|||||.+++.....
T Consensus 170 d~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 208 (296)
T 1inl_A 170 DS-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDP 208 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred cC-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 43 122121 12679999999999999999986543
No 198
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.80 E-value=7e-09 Score=96.52 Aligned_cols=93 Identities=16% Similarity=0.091 Sum_probs=63.8
Q ss_pred CCeEEEECCCCchHHHHHhhC-------------CCcccccCcccccHHHHHHHHHcCCCeEEE-EeCCCCCC-------
Q 009946 216 IRNVLDVGCGVASFGAYLLSH-------------DIIAMSLAPNDVHENQIQFALERGIPSTLG-VLGTKRLP------- 274 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~-------------~v~gvdis~~Dis~a~i~~A~~rg~~~~~~-~~d~~~lp------- 274 (522)
..+|||||||+|.++..|+++ .++++|+++.. ...++.+. ..|....+
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~~~~ 91 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQRILE 91 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHHHHH
Confidence 478999999999999998864 24555554421 01346666 66655432
Q ss_pred -CCCCCceEEEeccc---cccchhhh-------HHHHHHHHHhCCCCeEEEEEeCC
Q 009946 275 -YPSRSFELAHCSRC---RIDWLQRD-------GILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 275 -f~d~sFDlVv~s~~---~l~~~~d~-------~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+++++||+|+|..+ ..++..+. ..++.++.++|||||.|++.+..
T Consensus 92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 34568999998542 22333333 47899999999999999998743
No 199
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.80 E-value=7.9e-09 Score=105.54 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=67.6
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----------------CCCeEEEEeCCCCC--CCCC
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----------------GIPSTLGVLGTKRL--PYPS 277 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----------------g~~~~~~~~d~~~l--pf~d 277 (522)
..+|||+|||+|.++..|+...-....+.+.|+++.+++.|+++ ..++.+...|..+. ++++
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKS 185 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCC
Confidence 46899999999999999886410113445556667676666553 13688888898776 5667
Q ss_pred CCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 278 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 278 ~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
++||+|++.. .++..++.++.++|||||.+++..+.
T Consensus 186 ~~fD~V~~~~------~~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 186 LTFDAVALDM------LNPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp --EEEEEECS------SSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CCeeEEEECC------CCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 7899999753 22334899999999999999998764
No 200
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.79 E-value=8.2e-09 Score=105.31 Aligned_cols=104 Identities=14% Similarity=0.062 Sum_probs=73.3
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---------CCeEEEEeCCCC-CCCCCCCceEEEe
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---------IPSTLGVLGTKR-LPYPSRSFELAHC 285 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---------~~~~~~~~d~~~-lpf~d~sFDlVv~ 285 (522)
+.+|||||||+|.++..++.+. ....+...|+++.+++.|+++- .++.+..+|... ++..+++||+|++
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4789999999999999998752 2346677788889999888762 346778777544 3334578999997
Q ss_pred ccccccchhhh----HHHHHHHHHhCCCCeEEEEEeCCCC
Q 009946 286 SRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAY 321 (522)
Q Consensus 286 s~~~l~~~~d~----~~~L~ei~RvLkPGG~lvis~P~~~ 321 (522)
.. ..++.+.. ..+++++.++|+|||.+++.....+
T Consensus 188 d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 188 DS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp CC-C-------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred cC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 54 22222221 5789999999999999999874443
No 201
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.78 E-value=2.5e-08 Score=97.47 Aligned_cols=120 Identities=15% Similarity=0.077 Sum_probs=85.0
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+|||||||+|.++..++... .+..+.+.|+++.+++.|+++ +. ++.+..+|......+++.||+|+....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm- 99 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM- 99 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE-
T ss_pred CCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC-
Confidence 3689999999999999998752 122344445666666665543 43 488888887666555457999875542
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
.. .-...+|.+..+.|+++|+|+++.... .+.+++.+.+.||.+.+..
T Consensus 100 Gg--~lI~~IL~~~~~~l~~~~~lIlqp~~~----------~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 100 GG--RLIADILNNDIDKLQHVKTLVLQPNNR----------EDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp CH--HHHHHHHHHTGGGGTTCCEEEEEESSC----------HHHHHHHHHHTTEEEEEEE
T ss_pred ch--HHHHHHHHHHHHHhCcCCEEEEECCCC----------hHHHHHHHHHCCCEEEEEE
Confidence 11 223568889999999999999876321 4568888999999998765
No 202
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.78 E-value=5.7e-09 Score=100.24 Aligned_cols=96 Identities=15% Similarity=0.134 Sum_probs=68.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCc-----ccccCcccccHHHHHHHHHc----------CCCeEEEEeCCCCCCCCC-CC
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDII-----AMSLAPNDVHENQIQFALER----------GIPSTLGVLGTKRLPYPS-RS 279 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~-----gvdis~~Dis~a~i~~A~~r----------g~~~~~~~~d~~~lpf~d-~s 279 (522)
..+|||||||+|.++..|++..-. ...+.+.|+++.+++.|+++ ..++.+...|... ++++ ++
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~ 163 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAP 163 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCS
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCC
Confidence 468999999999999988763100 01445556666776666543 2367888888765 4444 78
Q ss_pred ceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 280 FELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 280 FDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
||+|++... +++. +.++.++|||||++++....
T Consensus 164 fD~I~~~~~-~~~~------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 164 YNAIHVGAA-APDT------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEEECSC-BSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred ccEEEECCc-hHHH------HHHHHHHhcCCCEEEEEEec
Confidence 999998774 5543 37899999999999998754
No 203
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.78 E-value=1.2e-08 Score=101.98 Aligned_cols=121 Identities=13% Similarity=0.115 Sum_probs=82.9
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---------CCeEEEEeCCCC-CCCCCCCceEEE
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---------IPSTLGVLGTKR-LPYPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---------~~~~~~~~d~~~-lpf~d~sFDlVv 284 (522)
.+++|||||||+|.++..++.+. ....+...|+++.+++.|++.- .++.+..+|... ++..+++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35789999999999999998751 1235666678888888887642 367888888654 333457899999
Q ss_pred eccccccchhh----hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhc
Q 009946 285 CSRCRIDWLQR----DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM 341 (522)
Q Consensus 285 ~s~~~l~~~~d----~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~ 341 (522)
+.. ..++.+. ...++.++.++|+|||.+++.....+.. ......+.+.+++.
T Consensus 154 ~d~-~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~----~~~~~~~~~~l~~~ 209 (275)
T 1iy9_A 154 VDS-TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFT----PELITNVQRDVKEI 209 (275)
T ss_dssp ESC-SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTC----HHHHHHHHHHHHTT
T ss_pred ECC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccc----HHHHHHHHHHHHHh
Confidence 754 2222211 2579999999999999999986443321 22344455555555
No 204
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.78 E-value=1.4e-08 Score=103.02 Aligned_cols=104 Identities=16% Similarity=0.111 Sum_probs=73.8
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc---------CCCeEEEEeCCCC-CCCCCCCceEEE
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKR-LPYPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r---------g~~~~~~~~d~~~-lpf~d~sFDlVv 284 (522)
.+++|||||||+|.++..++++. ....++..|+++.+++.|+++ ..++.+...|... ++..+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 34789999999999999998762 124566677888888887764 3467888888644 344467899999
Q ss_pred eccccccchh----hhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 285 CSRCRIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 285 ~s~~~l~~~~----d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
+.. ..++.+ ....+++++.++|||||.+++.....
T Consensus 174 ~d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 212 (304)
T 2o07_A 174 TDS-SDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQ 212 (304)
T ss_dssp EEC-C-----------CHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ECC-CCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCc
Confidence 754 232221 12468999999999999999976443
No 205
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.77 E-value=6.6e-08 Score=100.52 Aligned_cols=128 Identities=12% Similarity=0.087 Sum_probs=88.0
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCC-CCC-CCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKR-LPY-PSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~-lpf-~d~sFDlVv~s~~ 288 (522)
+.+|||+| |+|.++..++.... ...+.+.|+++.+++.|+++ +. ++.+..+|+.. +|. .+++||+|+++.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~- 249 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP- 249 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC-
T ss_pred CCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC-
Confidence 47899999 99999998876421 12455557777777776654 55 68899999877 764 456899999875
Q ss_pred cccchhhhHHHHHHHHHhCCCCeE-EEEEeCCCCCCChhHHHHHHHHHHHHH-hcCcEEEEEecc
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGY-FVYSSPEAYAHDPENRRIWNAMYDLLK-SMCWKIVSKKDQ 351 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~-lvis~P~~~~~~~e~~~~~~~l~~l~~-~~g~~~v~~~~~ 351 (522)
.++.. ....++.++.++|||||. ++++.-. .......|..+.+++. +.|+.+......
T Consensus 250 p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~----~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 309 (373)
T 2qm3_A 250 PETLE-AIRAFVGRGIATLKGPRCAGYFGITR----RESSLDKWREIQKLLLNEFNVVITDIIRN 309 (373)
T ss_dssp CSSHH-HHHHHHHHHHHTBCSTTCEEEEEECT----TTCCHHHHHHHHHHHHHTSCCEEEEEEEE
T ss_pred CCchH-HHHHHHHHHHHHcccCCeEEEEEEec----CcCCHHHHHHHHHHHHHhcCcchhhhhhh
Confidence 23332 357899999999999994 3555432 1112234566777777 889887654433
No 206
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.77 E-value=2.7e-08 Score=106.15 Aligned_cols=126 Identities=18% Similarity=0.164 Sum_probs=84.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCC--CCCCCceEEEe---
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLP--YPSRSFELAHC--- 285 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lp--f~d~sFDlVv~--- 285 (522)
..+|||+|||+|..+..|+...-....+.+.|+++.+++.++++ |. ++.+...|...++ +++++||+|++
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~P 339 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAP 339 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECC
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCC
Confidence 46899999999999999986411113455667777777766554 55 6788888887776 55578999995
Q ss_pred -c-cccccchhhh----------------HHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhc-CcEEE
Q 009946 286 -S-RCRIDWLQRD----------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIV 346 (522)
Q Consensus 286 -s-~~~l~~~~d~----------------~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~-g~~~v 346 (522)
+ ..+++..++. ..+|.++.++|||||++++++..... .++. +.+..++++. +|+++
T Consensus 340 csg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~--~ene---~~v~~~l~~~~~~~~~ 414 (450)
T 2yxl_A 340 CTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK--EENE---KNIRWFLNVHPEFKLV 414 (450)
T ss_dssp CCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG--GGTH---HHHHHHHHHCSSCEEC
T ss_pred CCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh--hhHH---HHHHHHHHhCCCCEEe
Confidence 2 2233322222 56899999999999999998854321 2222 2345556655 67654
No 207
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.77 E-value=1e-08 Score=104.84 Aligned_cols=103 Identities=15% Similarity=0.107 Sum_probs=75.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---------CCeEEEEeCCCC-CCCCCCCceEEEe
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---------IPSTLGVLGTKR-LPYPSRSFELAHC 285 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---------~~~~~~~~d~~~-lpf~d~sFDlVv~ 285 (522)
+.+|||||||+|.++..++++. .+..+...|+++.+++.|+++- .++.+...|... ++..+++||+|++
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4789999999999999998752 2346777788889999888762 357788887544 2333578999997
Q ss_pred ccccccch--hhh--HHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 286 SRCRIDWL--QRD--GILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 286 s~~~l~~~--~d~--~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
.. ..++. ... ..++.++.++|||||.+++.....
T Consensus 196 d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 196 DS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp EC-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred CC-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 54 22221 111 689999999999999999976544
No 208
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.77 E-value=1.1e-08 Score=102.66 Aligned_cols=105 Identities=13% Similarity=0.107 Sum_probs=77.2
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---------CCeEEEEeCCCCC-CCCCCCceEEE
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---------IPSTLGVLGTKRL-PYPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---------~~~~~~~~d~~~l-pf~d~sFDlVv 284 (522)
.+.+|||||||+|.++..++++. ....+...|+++.+++.|+++- .++.+...|.... +..+++||+|+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 34789999999999999998752 2346677788889999888762 3578888886542 22357899999
Q ss_pred eccccccchhh--h--HHHHHHHHHhCCCCeEEEEEeCCCC
Q 009946 285 CSRCRIDWLQR--D--GILLLELDRLLRPGGYFVYSSPEAY 321 (522)
Q Consensus 285 ~s~~~l~~~~d--~--~~~L~ei~RvLkPGG~lvis~P~~~ 321 (522)
+.. ..++.+. . ..+++++.++|+|||.+++.....+
T Consensus 157 ~d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~ 196 (283)
T 2i7c_A 157 VDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW 196 (283)
T ss_dssp EEC-CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred EcC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcc
Confidence 743 2332222 1 5899999999999999999875543
No 209
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.76 E-value=7.3e-09 Score=99.75 Aligned_cols=97 Identities=12% Similarity=0.149 Sum_probs=73.5
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCC-CCC--CCCceEEEec
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRL-PYP--SRSFELAHCS 286 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~l-pf~--d~sFDlVv~s 286 (522)
..+|||||||+|.++..|+... .+..+.+.|+++.+++.|+++ +. ++.+..+|.... +.. +++||+|++.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 3689999999999999998752 134566667788888777765 43 478888886653 432 5789999976
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.. . .+...++.++.++|||||.+++.+
T Consensus 134 ~~-~---~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 134 AA-K---GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp GG-G---SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CC-H---HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 53 2 356789999999999999999975
No 210
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.76 E-value=2.9e-08 Score=97.79 Aligned_cols=120 Identities=13% Similarity=0.060 Sum_probs=84.1
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+|||||||+|.++..|+... .+..+.+.|+++.+++.|+++ +. .+.+..+|......++..||+|+....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm- 99 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM- 99 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE-
T ss_pred CCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC-
Confidence 3689999999999999998752 122344445666666665544 44 478888887665544446999886542
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
.. .-...+|.+..+.|+++|+|+++.... .+.+++.+.+.||.+++..
T Consensus 100 Gg--~lI~~IL~~~~~~L~~~~~lIlq~~~~----------~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 100 GG--TLIRTILEEGAAKLAGVTKLILQPNIA----------AWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp CH--HHHHHHHHHTGGGGTTCCEEEEEESSC----------HHHHHHHHHHHTEEEEEEE
T ss_pred ch--HHHHHHHHHHHHHhCCCCEEEEEcCCC----------hHHHHHHHHHCCCEEEEEE
Confidence 11 223568899999999999999875321 4567888999999987655
No 211
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.75 E-value=1.6e-08 Score=105.69 Aligned_cols=96 Identities=14% Similarity=0.163 Sum_probs=71.6
Q ss_pred CCeEEEECCCCchHHHHHhhC---CCcccccCcccccHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCceEEEecc--c
Q 009946 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSR--C 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~---~v~gvdis~~Dis~a~i~~A~~rg~--~~~~~~~d~~~lpf~d~sFDlVv~s~--~ 288 (522)
.++|||||||+|.++...+++ .|+++|.++ . ...+.+.++..+. .+.++.++++++.++ +.||+|+|-. .
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~-~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-I-WQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-T-HHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-H-HHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 368999999999998877764 578888764 2 3344455555554 478888999998887 6799999732 1
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEE
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFV 314 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lv 314 (522)
.+.+......++....|.|||||.++
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cccccchhhhHHHHHHhhCCCCceEC
Confidence 24444456788999999999999987
No 212
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.75 E-value=5.7e-09 Score=102.17 Aligned_cols=98 Identities=10% Similarity=-0.008 Sum_probs=71.6
Q ss_pred CCeEEEECCCCchHHHHHhhC-----CCcccccCcccccHHHHHHHHHcCC--CeEEEEeCCCCC-CCC-----CCCceE
Q 009946 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-PYP-----SRSFEL 282 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~-----~v~gvdis~~Dis~a~i~~A~~rg~--~~~~~~~d~~~l-pf~-----d~sFDl 282 (522)
+.+|||||||+|..+..|+.. .|+++|+++..+..+... ++..+. ++.+..+|+.+. +.. +++||+
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~-~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPY-WREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHH-HHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 468999999999999999863 567777777666554433 333343 588888886543 221 478999
Q ss_pred EEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 283 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 283 Vv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
|++... ..+...++.++.++|||||.+++...
T Consensus 140 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 140 IFIDAD----KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEESC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEcCC----hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 996542 34556799999999999999999654
No 213
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.73 E-value=2.2e-08 Score=107.92 Aligned_cols=96 Identities=18% Similarity=0.166 Sum_probs=69.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C--CCeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g--~~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+|||||||+|.++..+++.. +..+.+.|+++ +++.|+++ + .++.+..+|..+++++ ++||+|++.. .
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~-~ 233 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEP-M 233 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCC-C
T ss_pred CCEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeC-c
Confidence 4689999999999999888752 22444556665 55555433 4 3588999998888776 5799999865 3
Q ss_pred ccch--hhhHHHHHHHHHhCCCCeEEEEE
Q 009946 290 IDWL--QRDGILLLELDRLLRPGGYFVYS 316 (522)
Q Consensus 290 l~~~--~d~~~~L~ei~RvLkPGG~lvis 316 (522)
+++. ++....+.++.++|||||.+++.
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4443 33356778899999999999853
No 214
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.72 E-value=1.4e-08 Score=101.70 Aligned_cols=100 Identities=14% Similarity=0.077 Sum_probs=72.6
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---------------CCeEEEEeCCCC-CCCCCCC
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---------------IPSTLGVLGTKR-LPYPSRS 279 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---------------~~~~~~~~d~~~-lpf~d~s 279 (522)
+.+|||||||+|.++..++.+ ....+...|+++.+++.|++.- .++.+...|... ++. +++
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 478999999999999999876 2346677788888888887652 346777777543 222 578
Q ss_pred ceEEEeccccccchh--h--hHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 280 FELAHCSRCRIDWLQ--R--DGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 280 FDlVv~s~~~l~~~~--d--~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
||+|++.. ..++.+ . ...++.++.++|+|||.+++....
T Consensus 153 fD~Ii~d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 153 FDVIIADS-TDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp EEEEEEEC-CCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eeEEEECC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 99999754 222211 1 267899999999999999997543
No 215
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.72 E-value=1.1e-08 Score=104.05 Aligned_cols=101 Identities=15% Similarity=0.116 Sum_probs=74.7
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----------CCCeEEEEeCCCC-CCCCCCCceEE
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----------GIPSTLGVLGTKR-LPYPSRSFELA 283 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----------g~~~~~~~~d~~~-lpf~d~sFDlV 283 (522)
.+.+|||||||+|.++..++++. ....+...|+++.+++.|+++ ..++.+..+|... ++..+++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 34789999999999999998752 233566667778888877654 2467888888655 34346789999
Q ss_pred Eeccccccc---hh--h--hHHHHHHHHHhCCCCeEEEEEe
Q 009946 284 HCSRCRIDW---LQ--R--DGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 284 v~s~~~l~~---~~--d--~~~~L~ei~RvLkPGG~lvis~ 317 (522)
++.. ..++ .+ . ...+++++.++|||||.+++..
T Consensus 156 i~d~-~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDL-TDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEC-CCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECC-CCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9865 3443 11 1 2679999999999999999875
No 216
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.71 E-value=2.7e-08 Score=96.38 Aligned_cols=99 Identities=16% Similarity=0.140 Sum_probs=71.6
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCC-CC--------------
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKR-LP-------------- 274 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~-lp-------------- 274 (522)
..+|||||||+|.++..|+...-.+..+.+.|+++.+++.|+++ +. .+.+..+|... ++
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 36899999999999999986521134566667777777777665 33 36777777533 12
Q ss_pred CCC--CCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 275 YPS--RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 275 f~d--~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
|++ ++||+|++... ..+...++.++.++|||||.+++...
T Consensus 141 f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp TCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 333 78999997642 34456789999999999999999763
No 217
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.71 E-value=6.1e-08 Score=94.40 Aligned_cols=119 Identities=15% Similarity=0.075 Sum_probs=81.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCC-CCCCCCCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGT-KRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~-~~lpf~d~sFDlVv~s~~ 288 (522)
..+|||||||+|.++..++... .+..+.+.|+++.+++.|+++ +. ++.+...|. ..++.. ..||+|+....
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~ 93 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET-DQVSVITIAGM 93 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG-GCCCEEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC-cCCCEEEEcCC
Confidence 3679999999999999998752 122344445555555555543 44 478888885 444432 26999886542
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
. -.-...+|.+....|+++|+|++.... ....+.+.+.+.||.++...
T Consensus 94 --G-g~~i~~Il~~~~~~L~~~~~lVlq~~~----------~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 94 --G-GRLIARILEEGLGKLANVERLILQPNN----------REDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp --C-HHHHHHHHHHTGGGCTTCCEEEEEESS----------CHHHHHHHHHHTTEEEEEEE
T ss_pred --C-hHHHHHHHHHHHHHhCCCCEEEEECCC----------CHHHHHHHHHHCCCEEEEEE
Confidence 1 122457899999999999999986531 14567888999999998764
No 218
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.71 E-value=1.5e-08 Score=99.44 Aligned_cols=98 Identities=11% Similarity=0.067 Sum_probs=69.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCC-C-C-----CCCCceE
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRL-P-Y-----PSRSFEL 282 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~l-p-f-----~d~sFDl 282 (522)
.++|||||||+|..+..|+...-.+..+...|+++.+++.|+++ +. ++.+..+|..+. + + ++++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 36899999999999999886421123455556666666666543 43 477888876442 3 2 1578999
Q ss_pred EEeccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 283 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 283 Vv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
|++... ..+...++.++.++|||||.+++..
T Consensus 160 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 160 IFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 997542 3455779999999999999999865
No 219
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.71 E-value=1.4e-08 Score=98.32 Aligned_cols=99 Identities=17% Similarity=0.095 Sum_probs=72.4
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCC----CCCCCC--CCceEE
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTK----RLPYPS--RSFELA 283 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~----~lpf~d--~sFDlV 283 (522)
..+|||||||+|.++..|+...-.+..+...|+++.+++.|++. +. ++.+..++.. .++.++ ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 36899999999999999987521134566667778777777654 43 4777777743 233333 789999
Q ss_pred EeccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
++... ..+...++.++.++|||||.+++...
T Consensus 153 ~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 153 FIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EECSC----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 96542 34557799999999999999999754
No 220
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.70 E-value=1.9e-08 Score=100.10 Aligned_cols=105 Identities=13% Similarity=0.039 Sum_probs=73.0
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCC----CCCCceEEEec
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPY----PSRSFELAHCS 286 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf----~d~sFDlVv~s 286 (522)
..+|||+|||+|.++..|++..-....+.+.|+++.+++.++++ +. ++.+...|...++. ++++||+|++.
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d 163 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEc
Confidence 46899999999999999886311113455556677776666544 44 67888888776654 25789999974
Q ss_pred cc-----ccc------------chhhhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 287 RC-----RID------------WLQRDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 287 ~~-----~l~------------~~~d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
.. .++ .......+|.++.++|||||++++++...
T Consensus 164 ~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 164 APCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp ECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 10 111 11334679999999999999999988554
No 221
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.70 E-value=6.2e-09 Score=105.76 Aligned_cols=99 Identities=15% Similarity=0.158 Sum_probs=65.2
Q ss_pred CCeEEEECCCCchHHHHHhhC-CCccccc----CcccccHHHHHHHHHcC-CCeEEEEe-CCCCCCCCCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSH-DIIAMSL----APNDVHENQIQFALERG-IPSTLGVL-GTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~-~v~gvdi----s~~Dis~a~i~~A~~rg-~~~~~~~~-d~~~lpf~d~sFDlVv~s~~ 288 (522)
..+|||||||+|.++..++++ .|+++|+ ....+... . .+..+ ..+.+... |+..++ .++||+|+|..+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~--~-~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~ 157 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPI--P-MSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIG 157 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC--C-CCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCC
T ss_pred CCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHH--H-hhhcCCCCeEEEeccccccCC--cCCCCEEEECCc
Confidence 468999999999999999876 5777776 22111100 0 01111 24667666 666654 468999998653
Q ss_pred c--ccchhhhH---HHHHHHHHhCCCCeEEEEEeCC
Q 009946 289 R--IDWLQRDG---ILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 289 ~--l~~~~d~~---~~L~ei~RvLkPGG~lvis~P~ 319 (522)
. .++..+.. .+|.++.++|||||.|++....
T Consensus 158 ~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 158 ESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred cccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 2 13333332 4789999999999999987643
No 222
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.70 E-value=5.5e-08 Score=101.76 Aligned_cols=127 Identities=11% Similarity=0.036 Sum_probs=82.7
Q ss_pred CCeEEEECCCCchHHHHHhhC---CCcccccCcccccHHHHHHHHHcCC---CeEEEEeCCCC-CCC---CCCCceEEEe
Q 009946 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKR-LPY---PSRSFELAHC 285 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~---~v~gvdis~~Dis~a~i~~A~~rg~---~~~~~~~d~~~-lpf---~d~sFDlVv~ 285 (522)
..+|||+|||+|.++..++.+ .|+++|+++..+..+..+ ++..+. ++.+..+|+.+ ++. ...+||+|++
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N-~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAH-FEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHH-HHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 368999999999999999874 355665555444333322 223344 67888888654 221 2358999998
Q ss_pred ccc--------cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q 009946 286 SRC--------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (522)
Q Consensus 286 s~~--------~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v 346 (522)
... ......+...++.++.++|+|||.++++...... . ....++.+...+.+.|.+++
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~-~--~~~~~~~i~~~~~~~g~~~~ 357 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM-T--VSQFKKQIEKGFGKQKHTYL 357 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-C--HHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC-C--HHHHHHHHHHHHHHcCCcEE
Confidence 422 2222344456888999999999999998855321 1 12335566677888888744
No 223
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.69 E-value=1.1e-07 Score=95.49 Aligned_cols=154 Identities=13% Similarity=0.160 Sum_probs=99.4
Q ss_pred ecCCeeecCCCCCCCCccHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhC---CCcccccCcccccH
Q 009946 174 VNGEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHE 250 (522)
Q Consensus 174 ~~g~~~~Fpgg~~~F~~ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~v~gvdis~~Dis~ 250 (522)
+.|-.+.|.-....|..+-..-...+.+++. .+.+|||+|||+|.++..++.+ .|+++ |+++
T Consensus 94 E~G~~~~~D~~k~~f~~~~~~er~ri~~~~~----------~g~~VlD~~aG~G~~~i~~a~~g~~~V~av-----D~np 158 (278)
T 3k6r_A 94 ENGIKYKLDVAKIMFSPANVKERVRMAKVAK----------PDELVVDMFAGIGHLSLPIAVYGKAKVIAI-----EKDP 158 (278)
T ss_dssp ETTEEEEEETTTSCCCGGGHHHHHHHHHHCC----------TTCEEEETTCTTTTTTHHHHHHTCCEEEEE-----CCCH
T ss_pred ECCEEEEEeccceEEcCCcHHHHHHHHHhcC----------CCCEEEEecCcCcHHHHHHHHhcCCeEEEE-----ECCH
Confidence 4555566655566777776655556666653 3478999999999999888754 34555 4555
Q ss_pred HHHHHHHH----cCC--CeEEEEeCCCCCCCCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCC
Q 009946 251 NQIQFALE----RGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD 324 (522)
Q Consensus 251 a~i~~A~~----rg~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~ 324 (522)
.+++.+++ .+. .+.+..+|..+++. .+.||.|++.. . .....+|..+.++||+||.+.+.......
T Consensus 159 ~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~--p---~~~~~~l~~a~~~lk~gG~ih~~~~~~e~-- 230 (278)
T 3k6r_A 159 YTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGY--V---VRTHEFIPKALSIAKDGAIIHYHNTVPEK-- 230 (278)
T ss_dssp HHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECC--C---SSGGGGHHHHHHHEEEEEEEEEEEEEEGG--
T ss_pred HHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECC--C---CcHHHHHHHHHHHcCCCCEEEEEeeeccc--
Confidence 55554443 343 46788888887764 47899998653 2 22345788889999999998764421100
Q ss_pred hhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 325 PENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 325 ~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
.......+.++++++..|+++.....
T Consensus 231 ~~~~~~~e~i~~~~~~~g~~v~~~~~ 256 (278)
T 3k6r_A 231 LMPREPFETFKRITKEYGYDVEKLNE 256 (278)
T ss_dssp GTTTTTHHHHHHHHHHTTCEEEEEEE
T ss_pred ccchhHHHHHHHHHHHcCCcEEEEEE
Confidence 00012245677888999998754433
No 224
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.69 E-value=3e-07 Score=86.36 Aligned_cols=119 Identities=10% Similarity=0.074 Sum_probs=83.5
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
...+|||+|||+|.++..++... ...+.+.|+++.+++.++++ +.++.+...|...++ ++||+|+++.. .
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p-~ 122 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLG--AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPP-F 122 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCC-C
T ss_pred CcCEEEEeeCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCC-C
Confidence 34689999999999999998762 12466667888888887765 336888888988765 48999998763 3
Q ss_pred cchh--hhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 291 DWLQ--RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 291 ~~~~--d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
++.. ....++.++.++| ||.+++..++ . ...+.+.+.+++.||++....
T Consensus 123 ~~~~~~~~~~~l~~~~~~l--~~~~~~~~~~-----~---~~~~~~~~~l~~~g~~~~~~~ 173 (207)
T 1wy7_A 123 GSQRKHADRPFLLKAFEIS--DVVYSIHLAK-----P---EVRRFIEKFSWEHGFVVTHRL 173 (207)
T ss_dssp SSSSTTTTHHHHHHHHHHC--SEEEEEEECC-----H---HHHHHHHHHHHHTTEEEEEEE
T ss_pred ccccCCchHHHHHHHHHhc--CcEEEEEeCC-----c---CCHHHHHHHHHHCCCeEEEEE
Confidence 3332 2357899999999 6655544222 1 123456777889999876543
No 225
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.69 E-value=1.9e-08 Score=102.72 Aligned_cols=100 Identities=12% Similarity=0.114 Sum_probs=75.4
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC-----CCeEEEEeCCCCC--CCCCCCceEEEecccc
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-----IPSTLGVLGTKRL--PYPSRSFELAHCSRCR 289 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg-----~~~~~~~~d~~~l--pf~d~sFDlVv~s~~~ 289 (522)
.+|||||||+|.++..++++. .++.++.+|+++.+++.|+++. .++.+...|...+ .+++++||+|++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~- 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF- 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS-
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC-
Confidence 489999999999999998741 2346777789999999998872 3578888886543 245678999997531
Q ss_pred ccc-hh---hhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 290 IDW-LQ---RDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 290 l~~-~~---d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
.++ .+ ....+++++.++|||||.|++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 221 11 126799999999999999998764
No 226
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.69 E-value=2.1e-08 Score=99.70 Aligned_cols=93 Identities=15% Similarity=0.113 Sum_probs=72.7
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc---------CCCeEEEEeCCCCCCCCCCCceEEEe
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKRLPYPSRSFELAHC 285 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r---------g~~~~~~~~d~~~lpf~d~sFDlVv~ 285 (522)
.+++|||||||+|.++..++.+ . ..+...|+++.+++.|++. ..++.+..+|..... ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEE
Confidence 3478999999999999999876 2 5677778888888887654 235778877776654 78999996
Q ss_pred ccccccchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
.. .++..++.++.++|||||.+++....
T Consensus 146 d~------~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 146 LQ------EPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp SS------CCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CC------CChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 53 24455999999999999999987543
No 227
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.68 E-value=1.8e-08 Score=98.29 Aligned_cols=119 Identities=12% Similarity=0.192 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEE
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLG 266 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~ 266 (522)
..+...+..++...... .....+|||+|||+|.++..++.+. .+..+.+.|+++.+++.|+++ +. ++.+.
T Consensus 46 ~~~~~~~~~~~~~~~~~---~~~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~ 121 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSD---KSTLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVV 121 (254)
T ss_dssp HHHHHHHHHHHCCCCGG---GCCCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHHHHhhcccc---CCCCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEE
Confidence 34455555555433210 0235689999999999998887541 123445556666676666554 43 37888
Q ss_pred EeCCCCC---CCC---CCCceEEEeccccccch--------------hhhHHHHHHHHHhCCCCeEEEE
Q 009946 267 VLGTKRL---PYP---SRSFELAHCSRCRIDWL--------------QRDGILLLELDRLLRPGGYFVY 315 (522)
Q Consensus 267 ~~d~~~l---pf~---d~sFDlVv~s~~~l~~~--------------~d~~~~L~ei~RvLkPGG~lvi 315 (522)
.+|+.+. +++ +++||+|+|+...++.. .....++.++.|+|||||.+.+
T Consensus 122 ~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 122 KVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp ECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred EcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 8886652 444 26899999874212111 0112345666666666666554
No 228
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.68 E-value=6e-08 Score=97.30 Aligned_cols=117 Identities=14% Similarity=0.167 Sum_probs=79.2
Q ss_pred cHHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeE
Q 009946 191 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PST 264 (522)
Q Consensus 191 ga~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~ 264 (522)
..+...+.+.+.+.. ....+|||+|||+|.++..++.. .+..+.+.|+++.+++.|+++ +. ++.
T Consensus 107 ~te~lv~~~l~~~~~--------~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~ 176 (284)
T 1nv8_A 107 ETEELVELALELIRK--------YGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFF 176 (284)
T ss_dssp THHHHHHHHHHHHHH--------HTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEE
T ss_pred hHHHHHHHHHHHhcc--------cCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceE
Confidence 345556655555531 12357999999999999999875 344566667777777777654 44 388
Q ss_pred EEEeCCCCCCCCCCCc---eEEEecccccc----------chh--------hhHHHHHHHH-HhCCCCeEEEEEeCC
Q 009946 265 LGVLGTKRLPYPSRSF---ELAHCSRCRID----------WLQ--------RDGILLLELD-RLLRPGGYFVYSSPE 319 (522)
Q Consensus 265 ~~~~d~~~lpf~d~sF---DlVv~s~~~l~----------~~~--------d~~~~L~ei~-RvLkPGG~lvis~P~ 319 (522)
+...|.... ++ ++| |+|+++.-.+. |.+ +...+++++. +.|+|||.+++..+.
T Consensus 177 ~~~~D~~~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 177 VRKGEFLEP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp EEESSTTGG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred EEECcchhh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 888887652 23 478 99998621110 221 1226899999 999999999997654
No 229
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.65 E-value=3.1e-08 Score=106.19 Aligned_cols=128 Identities=23% Similarity=0.212 Sum_probs=83.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCC-CCCCCceEEEe----
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLP-YPSRSFELAHC---- 285 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lp-f~d~sFDlVv~---- 285 (522)
...+|||+|||+|..+..|++..-....+.+.|+++.+++.++++ |..+.+...|...++ +.+++||+|++
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~Pc 180 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPC 180 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCC
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCc
Confidence 347899999999999999986421112455567777777666544 555777777766665 23578999994
Q ss_pred cc-ccccchhh----------------hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhc-CcEEEE
Q 009946 286 SR-CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIVS 347 (522)
Q Consensus 286 s~-~~l~~~~d----------------~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~-g~~~v~ 347 (522)
+. .++...++ ...+|.++.++|||||+|++++-... ..|+. +.+..++++. +|+++.
T Consensus 181 Sg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~--~eEne---~vv~~~l~~~~~~~l~~ 255 (464)
T 3m6w_A 181 SGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA--PEENE---GVVAHFLKAHPEFRLED 255 (464)
T ss_dssp CCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC--GGGTH---HHHHHHHHHCTTEEEEC
T ss_pred CCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc--hhcCH---HHHHHHHHHCCCcEEEe
Confidence 21 11211111 15689999999999999999874432 12222 2355556665 576653
No 230
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.63 E-value=1.4e-07 Score=93.69 Aligned_cols=129 Identities=10% Similarity=0.113 Sum_probs=87.4
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
+.+|||||||+|.++..++... ....+.+.|+++.++++++++ |.+..+.+.|...-+. .+.||+|++.- ++|
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p-~~~~DvaL~lk-ti~ 209 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRL-DEPADVTLLLK-TLP 209 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCC-CSCCSEEEETT-CHH
T ss_pred CceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCC-CCCcchHHHHH-HHH
Confidence 6789999999999998887541 233455557777777776654 7788888888665554 47799999777 688
Q ss_pred chhhhH--HHHHHHHHhCCCCeEEEEEeCC-CCCCChhHHHHH-HHHHHHHHhcCcEEEEE
Q 009946 292 WLQRDG--ILLLELDRLLRPGGYFVYSSPE-AYAHDPENRRIW-NAMYDLLKSMCWKIVSK 348 (522)
Q Consensus 292 ~~~d~~--~~L~ei~RvLkPGG~lvis~P~-~~~~~~e~~~~~-~~l~~l~~~~g~~~v~~ 348 (522)
+.++.. ..+ ++.+.|+|+|.++-...- ...+.......+ +.+++.+...||.+.+.
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~ 269 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRL 269 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeee
Confidence 887662 345 999999999998854321 222333333322 36778888889855543
No 231
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.63 E-value=1.6e-08 Score=96.72 Aligned_cols=99 Identities=14% Similarity=0.073 Sum_probs=69.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCC-C-CC----CCCceEE
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRL-P-YP----SRSFELA 283 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~l-p-f~----d~sFDlV 283 (522)
..+|||||||+|.++..++...-.+..+...|+++.+++.|+++ +. ++.+..+|..+. + ++ .++||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 36899999999999999987421133555556666666666554 43 578888775432 1 11 1689999
Q ss_pred EeccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
++... ..+...++.++.++|||||.+++...
T Consensus 150 ~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 150 VVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 97542 33456799999999999999998653
No 232
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.62 E-value=1.2e-07 Score=99.73 Aligned_cols=123 Identities=14% Similarity=-0.003 Sum_probs=80.0
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCC-CCCCCCceEEEeccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRL-PYPSRSFELAHCSRCRI 290 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~l-pf~d~sFDlVv~s~~~l 290 (522)
..+|||+|||+|.++..++.. +..+.+.|+++.+++.|+++ +....+...|+.++ +...+.||+|++....+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 478999999999999999875 22355667777777766554 55556667775543 22123499999753221
Q ss_pred c--------chhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcE
Q 009946 291 D--------WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWK 344 (522)
Q Consensus 291 ~--------~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~ 344 (522)
. ...+...++..+.++|||||.+++++...... .....+.+.+.+.+.|..
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~---~~~f~~~v~~a~~~~g~~ 350 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLR---LEDLLEVARRAAADLGRR 350 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC---HHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC---HHHHHHHHHHHHHHhCCe
Confidence 1 12344678999999999999999776443211 112233555666666654
No 233
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.62 E-value=6.6e-08 Score=96.99 Aligned_cols=107 Identities=17% Similarity=0.133 Sum_probs=74.0
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC------CCeEEEE
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG------IPSTLGV 267 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg------~~~~~~~ 267 (522)
...+.+.+.+.. ....+|||||||+|.++..|+++ +..+.+.|+++.+++.++++. .++.+..
T Consensus 15 ~i~~~i~~~~~~--------~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~ 83 (285)
T 1zq9_A 15 LIINSIIDKAAL--------RPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLV 83 (285)
T ss_dssp HHHHHHHHHTCC--------CTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEE
T ss_pred HHHHHHHHhcCC--------CCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 345556665543 23468999999999999999876 335666677888888777652 2578899
Q ss_pred eCCCCCCCCCCCceEEEeccccccchhhhH-HHH--------------HHH--HHhCCCCeEEE
Q 009946 268 LGTKRLPYPSRSFELAHCSRCRIDWLQRDG-ILL--------------LEL--DRLLRPGGYFV 314 (522)
Q Consensus 268 ~d~~~lpf~d~sFDlVv~s~~~l~~~~d~~-~~L--------------~ei--~RvLkPGG~lv 314 (522)
+|+..++++ +||+|+++. ..++..+.. .+| +|+ +++|+|||.++
T Consensus 84 ~D~~~~~~~--~fD~vv~nl-py~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 84 GDVLKTDLP--FFDTCVANL-PYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp SCTTTSCCC--CCSEEEEEC-CGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cceecccch--hhcEEEEec-CcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 998888776 799999864 344443321 222 344 37999999874
No 234
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.61 E-value=1.9e-07 Score=97.72 Aligned_cols=125 Identities=11% Similarity=0.059 Sum_probs=82.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC---CeEEEEeCCCCCCC----CCCCceEEE
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI---PSTLGVLGTKRLPY----PSRSFELAH 284 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~---~~~~~~~d~~~lpf----~d~sFDlVv 284 (522)
..+|||+|||+|.++..++... +..+.+.|+++.+++.|+++ +. ++.+..+|+.++.. ..++||+|+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 3689999999999999998752 22455556666666666543 55 67888888655421 146899999
Q ss_pred eccc--------cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEE
Q 009946 285 CSRC--------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (522)
Q Consensus 285 ~s~~--------~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~ 345 (522)
+..- ..+.......++.++.++|+|||.++++....... .+ ...+.+.+.+.+.|+..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~--~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT-SD--LFQKIIADAAIDAGRDV 364 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC-HH--HHHHHHHHHHHHHTCCE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-HH--HHHHHHHHHHHHcCCeE
Confidence 8531 12222455789999999999999999987543211 11 22334555677777433
No 235
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.60 E-value=3.8e-08 Score=102.68 Aligned_cols=122 Identities=15% Similarity=0.059 Sum_probs=81.3
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCC----CCCCceEEEec
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPY----PSRSFELAHCS 286 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf----~d~sFDlVv~s 286 (522)
..+|||+|||+|.++..++.. +..+.+.|+++.+++.|+++ +. ++.+..+|+.++.. .+++||+|++.
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 367999999999999999875 34455556666666666544 43 37888888655421 24689999984
Q ss_pred ccc--------ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCc
Q 009946 287 RCR--------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 343 (522)
Q Consensus 287 ~~~--------l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~ 343 (522)
.-. .....+...++.++.++|+|||.+++++...... .+ ...+.+.+.+.+.|.
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~--~~~~~i~~~~~~~g~ 348 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT-EP--LFYAMVAEAAQDAHR 348 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-HH--HHHHHHHHHHHHTTC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC-HH--HHHHHHHHHHHHcCC
Confidence 311 1222445679999999999999999988653211 11 123345556667764
No 236
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.60 E-value=1.5e-07 Score=92.50 Aligned_cols=129 Identities=16% Similarity=0.074 Sum_probs=81.9
Q ss_pred CCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 214 GNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 214 ~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+.+|||||||+|.++..+.. +..+.+.|+++.+++++++. +.+..+.+.|....+.+ ++||+|++.- +
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~----~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk-~ 177 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERG----IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFK-L 177 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTT----CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEES-C
T ss_pred CCCCeEEEecCCccHHHHHhcc----CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHH-H
Confidence 3467999999999999998772 33455556777777776654 67788899998877766 4899999776 5
Q ss_pred ccchhhh-HHHHHHHHHhCCCCeEEEEEeC-CCCCCChhHHHHHH-HHHHHHHhcCcEEEEE
Q 009946 290 IDWLQRD-GILLLELDRLLRPGGYFVYSSP-EAYAHDPENRRIWN-AMYDLLKSMCWKIVSK 348 (522)
Q Consensus 290 l~~~~d~-~~~L~ei~RvLkPGG~lvis~P-~~~~~~~e~~~~~~-~l~~l~~~~g~~~v~~ 348 (522)
+|+.++. .....++.+.|+++|.++-... ....+.......+. .+++.+....|.+.+.
T Consensus 178 lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~ 239 (253)
T 3frh_A 178 LPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKK 239 (253)
T ss_dssp HHHHHHHSTTHHHHHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEEE
T ss_pred HHHhhhhchhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhhe
Confidence 7877655 2244488889999977664331 22222222222222 4555555555554443
No 237
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.60 E-value=7.2e-08 Score=93.77 Aligned_cols=98 Identities=11% Similarity=0.051 Sum_probs=71.0
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCC-C-C-----CCCCceE
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRL-P-Y-----PSRSFEL 282 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~l-p-f-----~d~sFDl 282 (522)
.++|||||||+|..+..|+...-.+..+...|+++.+++.|+++ +. ++.+..+|..+. + + ++++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 46899999999999999986421134556667777777777654 44 477888775432 2 1 2578999
Q ss_pred EEeccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 283 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 283 Vv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
|++.. ...+...++.++.++|||||.+++..
T Consensus 151 I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 151 GFVDA----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECC----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99653 23455779999999999999999865
No 238
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.59 E-value=1.1e-07 Score=102.44 Aligned_cols=106 Identities=18% Similarity=0.166 Sum_probs=73.4
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCC-CCCCceEEEe---
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPY-PSRSFELAHC--- 285 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf-~d~sFDlVv~--- 285 (522)
...+|||+|||+|..+..|++..-....+.+.|+++.+++.++++ |. ++.+...|...++. .+++||.|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 347899999999999999987411123455567777777666544 54 57788888877653 4578999996
Q ss_pred -cc-ccccchhh----------------hHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 286 -SR-CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 286 -s~-~~l~~~~d----------------~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
+. .++...++ ...+|.++.++|||||++++++-..
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 21 11211111 2468999999999999999988543
No 239
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.58 E-value=3.3e-07 Score=94.04 Aligned_cols=92 Identities=12% Similarity=0.102 Sum_probs=68.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCCCCCCceEEEecccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+|||+|||+|.++.. +.. +..+.+.|+++.+++.|+++ +. ++.+..+|..++. ++||+|++...
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~---~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP- 267 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKN---AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP- 267 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTT---SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT-
T ss_pred CCEEEEccCccCHHHHh-ccC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc-
Confidence 46899999999999999 763 44555666677776666544 43 5888988887765 78999997531
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
.+ ...++.++.++|+|||.+++.+..
T Consensus 268 -~~---~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 268 -KF---AHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp -TT---GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred -Hh---HHHHHHHHHHHcCCCCEEEEEEee
Confidence 11 236899999999999999987643
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.57 E-value=1.2e-07 Score=97.31 Aligned_cols=123 Identities=17% Similarity=0.231 Sum_probs=84.0
Q ss_pred CCCeEEEECCCCchHHHHHhhCCC----cccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEec
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDI----IAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v----~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s 286 (522)
...+|||+|||+|.++..+++... ....+.+.|+++.+++.|+.. +.++.+..+|.... .+.+.||+|+++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEEEC
Confidence 346899999999999988875410 014566667777777776653 66788888886553 345789999987
Q ss_pred cccccchhhh------------------HHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCc
Q 009946 287 RCRIDWLQRD------------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 343 (522)
Q Consensus 287 ~~~l~~~~d~------------------~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~ 343 (522)
.. +++.+.. ..++..+.+.|+|||+++++.|..+..... ...+.+.+.+.++
T Consensus 209 PP-fg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~----~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 209 LP-VGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSD----FAKVDKFIKKNGH 278 (344)
T ss_dssp CC-CSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTT----HHHHHHHHHHHEE
T ss_pred CC-CCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCch----HHHHHHHHHhCCe
Confidence 53 3333211 258999999999999999999875432222 2456666666665
No 241
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.57 E-value=2.1e-07 Score=104.61 Aligned_cols=120 Identities=20% Similarity=0.166 Sum_probs=82.3
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC---CeEEEEeCCCC-CCCCCCCceEEEecc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI---PSTLGVLGTKR-LPYPSRSFELAHCSR 287 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~---~~~~~~~d~~~-lpf~d~sFDlVv~s~ 287 (522)
..+|||+|||+|.++..++... +..+...|+++.+++.|+++ +. ++.+..+|+.+ ++...++||+|++..
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 3689999999999999988642 12345556666666666554 43 47888888655 344457899999843
Q ss_pred c----------cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q 009946 288 C----------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (522)
Q Consensus 288 ~----------~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v 346 (522)
- ..+...+...++.++.++|+|||+|+++......... .+.+++.|++..
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~---------~~~l~~~g~~~~ 677 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD---------LDGLAKLGLKAQ 677 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCC---------HHHHHHTTEEEE
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccC---------HHHHHHcCCcee
Confidence 2 2334456678999999999999999998865321111 344567787643
No 242
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.57 E-value=7.2e-08 Score=102.17 Aligned_cols=126 Identities=15% Similarity=0.140 Sum_probs=80.2
Q ss_pred CCCeEEEECCCCchHHHHHhhC----CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC--CCCCCceEEEe---
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--YPSRSFELAHC--- 285 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~----~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp--f~d~sFDlVv~--- 285 (522)
+..+|||+|||+|..+..+++. .++++|+++..+.... +.+...+.++.+...|...++ +++++||+|++
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~-~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~P 324 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVY-DNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAP 324 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHH-HHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECC
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCC
Confidence 3468999999999999998864 3455555443332222 222333667888888887776 56678999995
Q ss_pred -cc-ccccchhhh----------------HHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhc-CcEEE
Q 009946 286 -SR-CRIDWLQRD----------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIV 346 (522)
Q Consensus 286 -s~-~~l~~~~d~----------------~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~-g~~~v 346 (522)
+. ..++..++. ..+|.++.++|||||++++++..... .++. ..+..++++. +|+++
T Consensus 325 csg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~--~ene---~~v~~~l~~~~~~~~~ 399 (429)
T 1sqg_A 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP--EENS---LQIKAFLQRTADAELC 399 (429)
T ss_dssp CCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG--GGTH---HHHHHHHHHCTTCEEC
T ss_pred CCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh--hhHH---HHHHHHHHhCCCCEEe
Confidence 22 122222221 46899999999999999998854321 2222 2344455443 56654
No 243
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.54 E-value=9.2e-08 Score=100.03 Aligned_cols=129 Identities=14% Similarity=0.174 Sum_probs=84.7
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhC-----CCcccccCcccccHHHHHHHHHcCCCeEEEE
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGV 267 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~-----~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~ 267 (522)
....+.+.+.+.. ....+|||+|||+|.++..++++ .++|+|+++..+ +.| .++.+..
T Consensus 25 ~~l~~~~~~~~~~--------~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~-----~~a----~~~~~~~ 87 (421)
T 2ih2_A 25 PEVVDFMVSLAEA--------PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKAL-----DLP----PWAEGIL 87 (421)
T ss_dssp HHHHHHHHHHCCC--------CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTC-----CCC----TTEEEEE
T ss_pred HHHHHHHHHhhcc--------CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHH-----HhC----CCCcEEe
Confidence 3455566666542 12358999999999999998863 455666555444 333 4578888
Q ss_pred eCCCCCCCCCCCceEEEecccc--ccc-------h-hh------------------hHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 268 LGTKRLPYPSRSFELAHCSRCR--IDW-------L-QR------------------DGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 268 ~d~~~lpf~d~sFDlVv~s~~~--l~~-------~-~d------------------~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
.|....+. +++||+|+++--. ... . .+ ...++..+.++|+|||+++++.|.
T Consensus 88 ~D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 88 ADFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 88776653 4689999985211 110 1 11 125789999999999999999987
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCc
Q 009946 320 AYAHDPENRRIWNAMYDLLKSMCW 343 (522)
Q Consensus 320 ~~~~~~e~~~~~~~l~~l~~~~g~ 343 (522)
.+.... ..+.+++.+.+.|+
T Consensus 167 ~~l~~~----~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 167 TWLVLE----DFALLREFLAREGK 186 (421)
T ss_dssp GGGTCG----GGHHHHHHHHHHSE
T ss_pred HHhcCc----cHHHHHHHHHhcCC
Confidence 543222 23457777777777
No 244
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.53 E-value=1.1e-07 Score=99.50 Aligned_cols=125 Identities=15% Similarity=-0.011 Sum_probs=82.1
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC--CeEEEEeCCCCCCC----CCCCceEEEe
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPY----PSRSFELAHC 285 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~--~~~~~~~d~~~lpf----~d~sFDlVv~ 285 (522)
..+|||+|||+|.++..++... +..+.+.|+++.+++.|+++ +. ++.+..+|+.++.. +.++||+|++
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g--~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAG--ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 4689999999999999998751 12445556666666665543 44 57888888655421 2568999998
Q ss_pred cccc--------ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEE
Q 009946 286 SRCR--------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (522)
Q Consensus 286 s~~~--------l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~ 345 (522)
.... .++..+...++.++.++|+|||.+++++...... .+ ...+.+.+.+...|..+
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~-~~--~~~~~v~~~~~~~~~~~ 360 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVD-LQ--MFKDMIIAAGAKAGKFL 360 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSC-HH--HHHHHHHHHHHHTTEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCC-HH--HHHHHHHHHHHHcCCeE
Confidence 4311 2222455779999999999999999887553211 11 12234445666666544
No 245
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.51 E-value=1.3e-07 Score=95.44 Aligned_cols=112 Identities=13% Similarity=0.029 Sum_probs=74.6
Q ss_pred CCCeEEEECC------CCch-HHHHHhh--CCCcccccCcccccHHHHHHHHHcCCCeEE-EEeCCCCCCCCCCCceEEE
Q 009946 215 NIRNVLDVGC------GVAS-FGAYLLS--HDIIAMSLAPNDVHENQIQFALERGIPSTL-GVLGTKRLPYPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGC------GtG~-~a~~La~--~~v~gvdis~~Dis~a~i~~A~~rg~~~~~-~~~d~~~lpf~d~sFDlVv 284 (522)
+..+|||+|| |+|. .++.+.. ..|+++|+++. + .++.+ .++|+..++++ ++||+|+
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v------------~~v~~~i~gD~~~~~~~-~~fD~Vv 128 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V------------SDADSTLIGDCATVHTA-NKWDLII 128 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B------------CSSSEEEESCGGGCCCS-SCEEEEE
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C------------CCCEEEEECccccCCcc-CcccEEE
Confidence 3468999999 4475 2222222 35677777664 1 25677 88998888765 6899999
Q ss_pred eccccccc-----------hhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 285 CSRCRIDW-----------LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 285 ~s~~~l~~-----------~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
+.. ..++ ......+++++.|+|||||.|++....... .+++..++++.||..+...
T Consensus 129 sn~-~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~--------~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 129 SDM-YDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--------NADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp ECC-CCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--------CHHHHHHHTTEEEEEEEEE
T ss_pred EcC-CccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC--------HHHHHHHHHHcCCcEEEEE
Confidence 753 2221 111247899999999999999997644311 2357778888888765443
No 246
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.47 E-value=1.7e-07 Score=100.36 Aligned_cols=128 Identities=16% Similarity=0.088 Sum_probs=81.2
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCC-CCCCCceEEEecc-
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLP-YPSRSFELAHCSR- 287 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lp-f~d~sFDlVv~s~- 287 (522)
...+|||+|||+|..+..|+...-....+.+.|+++.+++.++++ |. ++.+...|...++ ..+++||.|++..
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaP 184 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAP 184 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECC
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCC
Confidence 347899999999999988886411112344556666666655443 54 4677777766654 2347899999621
Q ss_pred ---c-cccchhh----------------hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEE
Q 009946 288 ---C-RIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 347 (522)
Q Consensus 288 ---~-~l~~~~d----------------~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~ 347 (522)
. ++...++ ...+|.++.++|||||++++++-... ..|+. +.+..++++.+|+++.
T Consensus 185 CSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~--~eEne---~vv~~~l~~~~~~l~~ 259 (456)
T 3m4x_A 185 CSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA--PEENE---EIISWLVENYPVTIEE 259 (456)
T ss_dssp CCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC--GGGTH---HHHHHHHHHSSEEEEC
T ss_pred CCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc--cccCH---HHHHHHHHhCCCEEEe
Confidence 1 1111111 13689999999999999999874432 12222 3466777888876664
No 247
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.43 E-value=1.3e-06 Score=92.56 Aligned_cols=131 Identities=17% Similarity=0.182 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEE
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGV 267 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~ 267 (522)
+...+.+.+.+.. ....+|||+|||+|.++..|+.. +..+.+.|+++.+++.|+++ +. ++.+..
T Consensus 272 e~l~~~~~~~l~~--------~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~ 340 (433)
T 1uwv_A 272 QKMVARALEWLDV--------QPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYH 340 (433)
T ss_dssp HHHHHHHHHHHTC--------CTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHhhcC--------CCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEE
Confidence 4445555555542 23468999999999999999976 34555566777777766543 43 688999
Q ss_pred eCCCC----CCCCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCc
Q 009946 268 LGTKR----LPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 343 (522)
Q Consensus 268 ~d~~~----lpf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~ 343 (522)
+|+.+ +++++++||+|++..-... ...++..+.+ ++|++.++++..+. .+..-...+.+.||
T Consensus 341 ~d~~~~l~~~~~~~~~fD~Vv~dPPr~g----~~~~~~~l~~-~~p~~ivyvsc~p~---------tlard~~~l~~~Gy 406 (433)
T 1uwv_A 341 ENLEEDVTKQPWAKNGFDKVLLDPARAG----AAGVMQQIIK-LEPIRIVYVSCNPA---------TLARDSEALLKAGY 406 (433)
T ss_dssp CCTTSCCSSSGGGTTCCSEEEECCCTTC----CHHHHHHHHH-HCCSEEEEEESCHH---------HHHHHHHHHHHTTC
T ss_pred CCHHHHhhhhhhhcCCCCEEEECCCCcc----HHHHHHHHHh-cCCCeEEEEECChH---------HHHhhHHHHHHCCc
Confidence 98766 3456678999997542111 1245555543 79999998865321 12222344566799
Q ss_pred EEEEE
Q 009946 344 KIVSK 348 (522)
Q Consensus 344 ~~v~~ 348 (522)
++...
T Consensus 407 ~~~~~ 411 (433)
T 1uwv_A 407 TIARL 411 (433)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88763
No 248
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.41 E-value=7.9e-07 Score=89.76 Aligned_cols=81 Identities=19% Similarity=0.267 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-CCeEEEEe
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-IPSTLGVL 268 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-~~~~~~~~ 268 (522)
...+.+.+.+... ...+|||||||+|.++..|+++ +..+.+.|+++.+++.++++ + .++.+..+
T Consensus 29 ~i~~~i~~~~~~~--------~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~ 97 (299)
T 2h1r_A 29 GILDKIIYAAKIK--------SSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEG 97 (299)
T ss_dssp HHHHHHHHHHCCC--------TTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC---
T ss_pred HHHHHHHHhcCCC--------CcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 3455555655432 3468999999999999999976 34566667777777777654 3 36788888
Q ss_pred CCCCCCCCCCCceEEEecc
Q 009946 269 GTKRLPYPSRSFELAHCSR 287 (522)
Q Consensus 269 d~~~lpf~d~sFDlVv~s~ 287 (522)
|+..++++ +||+|+++.
T Consensus 98 D~~~~~~~--~~D~Vv~n~ 114 (299)
T 2h1r_A 98 DAIKTVFP--KFDVCTANI 114 (299)
T ss_dssp -CCSSCCC--CCSEEEEEC
T ss_pred chhhCCcc--cCCEEEEcC
Confidence 88887764 799999765
No 249
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.33 E-value=3.4e-07 Score=94.90 Aligned_cols=104 Identities=10% Similarity=0.002 Sum_probs=72.5
Q ss_pred CCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC-------------CeEEEEeCCCCCCC----C
Q 009946 214 GNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI-------------PSTLGVLGTKRLPY----P 276 (522)
Q Consensus 214 ~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~-------------~~~~~~~d~~~lpf----~ 276 (522)
..+++|||||||+|.++..++.+.. ..++..|+++.+++.|++.-. ++.+...|...+-- +
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 3568999999999999999987642 456677888999999987621 46777777544321 3
Q ss_pred CCCceEEEeccccccch--h---hhHHHHHHH----HHhCCCCeEEEEEeCC
Q 009946 277 SRSFELAHCSRCRIDWL--Q---RDGILLLEL----DRLLRPGGYFVYSSPE 319 (522)
Q Consensus 277 d~sFDlVv~s~~~l~~~--~---d~~~~L~ei----~RvLkPGG~lvis~P~ 319 (522)
.++||+|++-...+... + ....+++.+ .++|+|||.+++....
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 47899999643211111 1 113456665 9999999999986643
No 250
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.29 E-value=1.9e-06 Score=89.84 Aligned_cols=48 Identities=19% Similarity=0.343 Sum_probs=39.3
Q ss_pred CCCCCCCCCCceEEEeccccccchh--------------------------------------hhHHHHHHHHHhCCCCe
Q 009946 270 TKRLPYPSRSFELAHCSRCRIDWLQ--------------------------------------RDGILLLELDRLLRPGG 311 (522)
Q Consensus 270 ~~~lpf~d~sFDlVv~s~~~l~~~~--------------------------------------d~~~~L~ei~RvLkPGG 311 (522)
...-.||+++||+|+++. ++||+. |...+|+..++.|+|||
T Consensus 141 Fy~rlfP~~S~d~v~Ss~-aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG 219 (374)
T 3b5i_A 141 FYRRLFPARTIDFFHSAF-SLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGG 219 (374)
T ss_dssp TTSCCSCTTCEEEEEEES-CTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred hhcccCCCcceEEEEecc-eeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 334458899999999888 599976 34457899999999999
Q ss_pred EEEEEeC
Q 009946 312 YFVYSSP 318 (522)
Q Consensus 312 ~lvis~P 318 (522)
.++++..
T Consensus 220 ~mvl~~~ 226 (374)
T 3b5i_A 220 AMFLVCL 226 (374)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999875
No 251
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.28 E-value=2.1e-06 Score=84.05 Aligned_cols=68 Identities=10% Similarity=0.182 Sum_probs=52.4
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---CCeEEEEeCCCCCCCCC-CCceEEEec
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPS-RSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---~~~~~~~~d~~~lpf~d-~sFDlVv~s 286 (522)
...+|||||||+|.++..|+++ +..+.+.|+++.+++.++++. .++.+..+|+.++++++ ..|+ |+++
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-vv~n 101 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYK-IFGN 101 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCE-EEEE
T ss_pred CCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeE-EEEe
Confidence 3468999999999999999986 245667788888888888763 46889999999988874 4563 4444
No 252
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.25 E-value=3.5e-06 Score=89.30 Aligned_cols=93 Identities=22% Similarity=0.306 Sum_probs=65.2
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
..+|||+|||+|.++..|++. +..+.+.|+++.+++.|+++ +..+.+..+|+.++... +||+|++....
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr-- 363 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPR-- 363 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCT--
T ss_pred CCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCc--
Confidence 368999999999999999876 23455556666666665543 45588899998877532 89999975421
Q ss_pred chhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 292 WLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
..-...++..+. .|+|||.++++.
T Consensus 364 -~g~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 364 -AGLHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp -TCSCHHHHHHHH-HHCCSEEEEEES
T ss_pred -cchHHHHHHHHH-hcCCCcEEEEEC
Confidence 111234555554 599999999976
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.24 E-value=1.3e-06 Score=92.79 Aligned_cols=119 Identities=15% Similarity=0.059 Sum_probs=79.3
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCC------------CcccccCcccccHHHHHHHHHc-
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHD------------IIAMSLAPNDVHENQIQFALER- 259 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~------------v~gvdis~~Dis~a~i~~A~~r- 259 (522)
....+.+.+++.. ....+|||.|||+|.++..+++.- +....+.+.|+++.+.+.|+..
T Consensus 157 ~~v~~~mv~~l~~--------~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl 228 (445)
T 2okc_A 157 RPLIQAMVDCINP--------QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNL 228 (445)
T ss_dssp HHHHHHHHHHHCC--------CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC--------CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHH
Confidence 3455666666642 233679999999999988776420 0123455666667777766543
Q ss_pred ---CC---CeEEEEeCCCCCCCCCCCceEEEecccccc--chhh--------------hHHHHHHHHHhCCCCeEEEEEe
Q 009946 260 ---GI---PSTLGVLGTKRLPYPSRSFELAHCSRCRID--WLQR--------------DGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 260 ---g~---~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~--~~~d--------------~~~~L~ei~RvLkPGG~lvis~ 317 (522)
+. ...+..+|+...+.. .+||+|+++..... +... ...++..+.++|||||+++++.
T Consensus 229 ~l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 229 YLHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp HHTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 54 567888887766654 48999998642111 1100 1368999999999999999998
Q ss_pred CCC
Q 009946 318 PEA 320 (522)
Q Consensus 318 P~~ 320 (522)
|..
T Consensus 308 p~~ 310 (445)
T 2okc_A 308 PDN 310 (445)
T ss_dssp EHH
T ss_pred CCc
Confidence 753
No 254
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.24 E-value=4.4e-08 Score=95.66 Aligned_cols=96 Identities=14% Similarity=0.114 Sum_probs=62.3
Q ss_pred CCeEEEECCCCchHHHHHhhC--CCcccccCcccccHHHHHHHHHc---CCCeEEEEeCCCCCCCCC-CCceEEEeccc-
Q 009946 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER---GIPSTLGVLGTKRLPYPS-RSFELAHCSRC- 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~--~v~gvdis~~Dis~a~i~~A~~r---g~~~~~~~~d~~~lpf~d-~sFDlVv~s~~- 288 (522)
..+|||||||+|.++..|+++ .++++|+++. +++.++++ ..++.+..+|+.++++++ ++| .|+++..
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~-----~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py 103 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKISKQVTSIELDSH-----LFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPY 103 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHSSEEEESSSSCS-----SSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCS
T ss_pred CCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHH-----HHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCc
Confidence 468999999999999999875 4555555544 44444333 235788888998888774 678 5665421
Q ss_pred ---------cccchhhhHHHH----HHHHHhCCCCeEEEEEe
Q 009946 289 ---------RIDWLQRDGILL----LELDRLLRPGGYFVYSS 317 (522)
Q Consensus 289 ---------~l~~~~d~~~~L----~ei~RvLkPGG~lvis~ 317 (522)
.+.|......++ +.+.|+|+|||.+.+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 104 HLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 001111222234 66899999999887754
No 255
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.16 E-value=1.1e-05 Score=80.39 Aligned_cols=102 Identities=17% Similarity=0.201 Sum_probs=62.6
Q ss_pred CCeEEEECCCCchHHHHHhhC----CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccc---
Q 009946 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRC--- 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~----~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~--- 288 (522)
..+|||+|||+|.++...+.+ .+.++++. .|.....+.. ...+.++.....+++...++.+.||+|+|..+
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVG-vDl~~~pi~~-~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apns 152 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLG-RDGHEKPMNV-QSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESS 152 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCC-CTTCCCCCCC-CBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEe-ccCccccccc-CcCCCCeEEEeccceehhcCCCCccEEEecCccCc
Confidence 357999999999999988754 23334433 2221100000 00122445555555556677789999998652
Q ss_pred cccchhhhH--HHHHHHHHhCCCC-eEEEEEeCC
Q 009946 289 RIDWLQRDG--ILLLELDRLLRPG-GYFVYSSPE 319 (522)
Q Consensus 289 ~l~~~~d~~--~~L~ei~RvLkPG-G~lvis~P~ 319 (522)
.+++.+... .+|..+.++|+|| |.|++..-.
T Consensus 153 G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 153 SSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 222443332 3578889999999 999997633
No 256
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.12 E-value=5.4e-06 Score=86.70 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=64.6
Q ss_pred CCeEEEECCCCchHHHHHhhC-------C---------CcccccCccccc-----------HHHHHHHHH-cC--CCeEE
Q 009946 216 IRNVLDVGCGVASFGAYLLSH-------D---------IIAMSLAPNDVH-----------ENQIQFALE-RG--IPSTL 265 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~-------~---------v~gvdis~~Dis-----------~a~i~~A~~-rg--~~~~~ 265 (522)
..+|+|+||++|..+..+... . ...+.+...|+. +...+..++ .+ .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999887766532 0 112333333333 222222222 22 23344
Q ss_pred EEeC---CCCCCCCCCCceEEEeccccccchhhhH---------------------------------------HHHHHH
Q 009946 266 GVLG---TKRLPYPSRSFELAHCSRCRIDWLQRDG---------------------------------------ILLLEL 303 (522)
Q Consensus 266 ~~~d---~~~lpf~d~sFDlVv~s~~~l~~~~d~~---------------------------------------~~L~ei 303 (522)
..+. ...-.||+++||+|+++. ++||..+.. .+|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCY-CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEES-CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecc-eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433 344568999999999888 599975432 126666
Q ss_pred HHhCCCCeEEEEEeCC
Q 009946 304 DRLLRPGGYFVYSSPE 319 (522)
Q Consensus 304 ~RvLkPGG~lvis~P~ 319 (522)
++.|+|||+++++...
T Consensus 212 a~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 212 SEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHEEEEEEEEEEEEC
T ss_pred HHHhccCCeEEEEEec
Confidence 8999999999998754
No 257
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.11 E-value=3e-06 Score=85.68 Aligned_cols=81 Identities=9% Similarity=0.069 Sum_probs=58.6
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhC--CCcccccCcccccHHHHHHHHHc---CCCeEEEEe
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER---GIPSTLGVL 268 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~v~gvdis~~Dis~a~i~~A~~r---g~~~~~~~~ 268 (522)
...+.+.+.+... ...+|||||||+|.++..|+++ .|+++|+++ .+++.++++ ..++.+..+
T Consensus 37 ~i~~~Iv~~l~~~--------~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~-----~li~~a~~~~~~~~~v~vi~g 103 (295)
T 3gru_A 37 NFVNKAVESANLT--------KDDVVLEIGLGKGILTEELAKNAKKVYVIEIDK-----SLEPYANKLKELYNNIEIIWG 103 (295)
T ss_dssp HHHHHHHHHTTCC--------TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCG-----GGHHHHHHHHHHCSSEEEEES
T ss_pred HHHHHHHHhcCCC--------CcCEEEEECCCchHHHHHHHhcCCEEEEEECCH-----HHHHHHHHHhccCCCeEEEEC
Confidence 4455666666532 3468999999999999999875 455555554 444444433 357899999
Q ss_pred CCCCCCCCCCCceEEEecc
Q 009946 269 GTKRLPYPSRSFELAHCSR 287 (522)
Q Consensus 269 d~~~lpf~d~sFDlVv~s~ 287 (522)
|+..+++++.+||.|+++.
T Consensus 104 D~l~~~~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 104 DALKVDLNKLDFNKVVANL 122 (295)
T ss_dssp CTTTSCGGGSCCSEEEEEC
T ss_pred chhhCCcccCCccEEEEeC
Confidence 9999998888899999664
No 258
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.00 E-value=2.1e-05 Score=82.48 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=69.9
Q ss_pred CCeEEEECCCCchHHHHHhhC--CC-----------------------------------cccccCcccccHHHHHHHHH
Q 009946 216 IRNVLDVGCGVASFGAYLLSH--DI-----------------------------------IAMSLAPNDVHENQIQFALE 258 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~--~v-----------------------------------~gvdis~~Dis~a~i~~A~~ 258 (522)
...|||.+||+|.++...+.. ++ ....+.+.|+++.+++.|++
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 367999999999988766532 21 01235666777777777765
Q ss_pred c----CC--CeEEEEeCCCCCCCCCCCceEEEeccccccch---hhhHHHHHHHHHhCCC--CeEEEEEeCCC
Q 009946 259 R----GI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRP--GGYFVYSSPEA 320 (522)
Q Consensus 259 r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~---~d~~~~L~ei~RvLkP--GG~lvis~P~~ 320 (522)
+ +. .+.+...|+.+++.+ .+||+|+++--..... .+...+..++.++||+ ||.+++.+++.
T Consensus 282 Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 282 NAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYE 353 (393)
T ss_dssp HHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECCT
T ss_pred HHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4 44 478999999888876 4899999874211112 2334566666666665 99999887653
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.98 E-value=2.2e-05 Score=82.07 Aligned_cols=104 Identities=16% Similarity=0.140 Sum_probs=72.3
Q ss_pred CCeEEEECCCCchHHHHHhhC--CC-----------------------------------cccccCcccccHHHHHHHHH
Q 009946 216 IRNVLDVGCGVASFGAYLLSH--DI-----------------------------------IAMSLAPNDVHENQIQFALE 258 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~--~v-----------------------------------~gvdis~~Dis~a~i~~A~~ 258 (522)
..+|||++||+|.++..++.. ++ ....+.+.|+++.+++.|++
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 467999999999988777542 10 01345666777777777765
Q ss_pred c----CC--CeEEEEeCCCCCCCCCCCceEEEeccccccch---hhhHHHHHHHHHhCCC--CeEEEEEeCCC
Q 009946 259 R----GI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRP--GGYFVYSSPEA 320 (522)
Q Consensus 259 r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~---~d~~~~L~ei~RvLkP--GG~lvis~P~~ 320 (522)
+ +. .+.+...|+.+++.+ .+||+|+++--..+.. .+...+..++.++||+ ||.+++.+++.
T Consensus 276 Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 276 NAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYE 347 (385)
T ss_dssp HHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCT
T ss_pred HHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCH
Confidence 4 54 478999998888765 5899999865322222 2345577777778876 89988887654
No 260
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.94 E-value=4.2e-05 Score=79.95 Aligned_cols=104 Identities=14% Similarity=0.144 Sum_probs=71.8
Q ss_pred CCeEEEECCCCchHHHHHhhC--CC-----------------------------------cccccCcccccHHHHHHHHH
Q 009946 216 IRNVLDVGCGVASFGAYLLSH--DI-----------------------------------IAMSLAPNDVHENQIQFALE 258 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~--~v-----------------------------------~gvdis~~Dis~a~i~~A~~ 258 (522)
...+||.+||+|.++...+.. ++ ....+.+.|+++.+++.|++
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 367999999999988776532 10 01235666777777777765
Q ss_pred c----CC--CeEEEEeCCCCCCCCCCCceEEEeccc---cccchhhhHHHHHHHHHhCCC--CeEEEEEeCCC
Q 009946 259 R----GI--PSTLGVLGTKRLPYPSRSFELAHCSRC---RIDWLQRDGILLLELDRLLRP--GGYFVYSSPEA 320 (522)
Q Consensus 259 r----g~--~~~~~~~d~~~lpf~d~sFDlVv~s~~---~l~~~~d~~~~L~ei~RvLkP--GG~lvis~P~~ 320 (522)
+ |. .+.+...|+.+++.+ .+||+|+++-- .+.-..+...+..++.+.||+ ||.+++.+++.
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 346 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDT 346 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCT
T ss_pred HHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCH
Confidence 4 44 478999999888876 48999998632 111123445677777778876 99999888653
No 261
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.93 E-value=7.6e-06 Score=84.82 Aligned_cols=92 Identities=14% Similarity=0.159 Sum_probs=60.4
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHH----cCC-CeEEEEeCCCCCC--CCC------------
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALE----RGI-PSTLGVLGTKRLP--YPS------------ 277 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~----rg~-~~~~~~~d~~~lp--f~d------------ 277 (522)
.+|||+|||+|.++..|+.. +..+.+.|+++.+++.|++ .+. ++.+..+|+.++. +..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 57999999999999999874 2234444555555555543 344 6788888865532 111
Q ss_pred --CCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 278 --RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 278 --~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
.+||+|++..-.. .+..++.+.|+++|.+++++-
T Consensus 292 ~~~~fD~Vv~dPPr~-------g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 292 KSYQCETIFVDPPRS-------GLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp GGCCEEEEEECCCTT-------CCCHHHHHHHTTSSEEEEEES
T ss_pred ccCCCCEEEECcCcc-------ccHHHHHHHHhCCCEEEEEEC
Confidence 3799998543111 234567777889999888763
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.90 E-value=2e-05 Score=77.92 Aligned_cols=81 Identities=12% Similarity=0.235 Sum_probs=59.5
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc---CCCeEEEEeCC
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---GIPSTLGVLGT 270 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r---g~~~~~~~~d~ 270 (522)
...+.+.+.+... ...+|||||||+|.++..|+++ +..+.+.|+++.+++.++++ ..++.+..+|+
T Consensus 16 ~i~~~iv~~~~~~--------~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~ 84 (255)
T 3tqs_A 16 FVLQKIVSAIHPQ--------KTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDA 84 (255)
T ss_dssp HHHHHHHHHHCCC--------TTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCT
T ss_pred HHHHHHHHhcCCC--------CcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcch
Confidence 3455666666532 3468999999999999999986 24566667888888888766 25789999999
Q ss_pred CCCCCCC----CCceEEEec
Q 009946 271 KRLPYPS----RSFELAHCS 286 (522)
Q Consensus 271 ~~lpf~d----~sFDlVv~s 286 (522)
..+++++ +.|| |+++
T Consensus 85 ~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 85 LQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp TTCCGGGSCCSSCEE-EEEE
T ss_pred HhCCHHHhccCCCeE-EEec
Confidence 9888653 4688 5533
No 263
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.88 E-value=3.2e-05 Score=78.52 Aligned_cols=103 Identities=12% Similarity=-0.040 Sum_probs=64.4
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CC-CeEEEEeCCCCCCCCC---CCceEEEe--
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI-PSTLGVLGTKRLPYPS---RSFELAHC-- 285 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~-~~~~~~~d~~~lpf~d---~sFDlVv~-- 285 (522)
..+|||+|||+|..+..|+...-....+.+.|+++.+++.++++ +. ++.+...|...++... .+||.|++
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~ 182 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDP 182 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECC
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcC
Confidence 46899999999999998886310112344456666666655543 54 5788888877765432 57999996
Q ss_pred --cc-ccccchh-----------h-------hHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 286 --SR-CRIDWLQ-----------R-------DGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 286 --s~-~~l~~~~-----------d-------~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
+. .++...+ + ...+|..+.++|+ ||++++++-.
T Consensus 183 PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 183 SCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp CCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred CcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 21 1111111 1 1246777888887 9999987643
No 264
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.88 E-value=7.9e-06 Score=84.73 Aligned_cols=103 Identities=16% Similarity=0.228 Sum_probs=64.8
Q ss_pred CCCeEEEECCCCchHHHHHhhC---------------CCcccccCcccccHHHHHHHHHcCC------CeEEEEe---CC
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH---------------DIIAMSLAPNDVHENQIQFALERGI------PSTLGVL---GT 270 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~---------------~v~gvdis~~Dis~a~i~~A~~rg~------~~~~~~~---d~ 270 (522)
..-+|+|+||++|..+..+.+. ....+.+...|+..+.-+..-+.-. +..+..+ ..
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3467999999999776655432 1122333333433333333222211 1233322 24
Q ss_pred CCCCCCCCCceEEEeccccccchhhh---------------------------------HHHHHHHHHhCCCCeEEEEEe
Q 009946 271 KRLPYPSRSFELAHCSRCRIDWLQRD---------------------------------GILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 271 ~~lpf~d~sFDlVv~s~~~l~~~~d~---------------------------------~~~L~ei~RvLkPGG~lvis~ 317 (522)
..-.||++++|+|+++. ++||..+. ..+|+..++.|+|||.++++.
T Consensus 131 y~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSY-SLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEES-CTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehh-hhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 55678999999999888 59997542 235888999999999999987
Q ss_pred C
Q 009946 318 P 318 (522)
Q Consensus 318 P 318 (522)
.
T Consensus 210 ~ 210 (359)
T 1m6e_X 210 L 210 (359)
T ss_dssp E
T ss_pred e
Confidence 4
No 265
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.84 E-value=1.5e-05 Score=88.24 Aligned_cols=117 Identities=14% Similarity=0.137 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHH---HHhhC-----CCcccccCcccccHHHHHHHHHc--CCC
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGA---YLLSH-----DIIAMSLAPNDVHENQIQFALER--GIP 262 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~---~La~~-----~v~gvdis~~Dis~a~i~~A~~r--g~~ 262 (522)
+.|.+.|.+.+.-....-....+...|||||||+|.+.. ..+.+ +|.+++-++... ..++..++. +..
T Consensus 335 ~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~--~a~~~v~~N~~~dk 412 (637)
T 4gqb_A 335 SQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV--VTLENWQFEEWGSQ 412 (637)
T ss_dssp HHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH--HHHHHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH--HHHHHHHhccCCCe
Confidence 445556655442110011122334679999999997743 33333 345555544222 222222333 346
Q ss_pred eEEEEeCCCCCCCCCCCceEEEeccccccch---hhhHHHHHHHHHhCCCCeEEE
Q 009946 263 STLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRPGGYFV 314 (522)
Q Consensus 263 ~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~---~d~~~~L~ei~RvLkPGG~lv 314 (522)
++++.++++++..| +.+|+|++-. +.+. +....+|....|.|||||.++
T Consensus 413 VtVI~gd~eev~LP-EKVDIIVSEw--MG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 413 VTVVSSDMREWVAP-EKADIIVSEL--LGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEEESCTTTCCCS-SCEEEEECCC--CBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEeCcceeccCC-cccCEEEEEc--CcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 88999999998877 6799999632 2221 122357888899999999876
No 266
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.82 E-value=2.4e-05 Score=77.99 Aligned_cols=82 Identities=15% Similarity=0.122 Sum_probs=57.7
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc--CCCeEEEEeCCC
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER--GIPSTLGVLGTK 271 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r--g~~~~~~~~d~~ 271 (522)
...+.+.+.+... .. +|||||||+|.++..|+++ +..+.+.|+++.+++.++++ ..++.+..+|+.
T Consensus 34 ~i~~~Iv~~~~~~--------~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l 101 (271)
T 3fut_A 34 AHLRRIVEAARPF--------TG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDAL 101 (271)
T ss_dssp HHHHHHHHHHCCC--------CS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTTTSSEEEEESCGG
T ss_pred HHHHHHHHhcCCC--------CC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcCCCCEEEEECChh
Confidence 3455666666532 23 7999999999999999986 23444455666666666665 346889999998
Q ss_pred CCCCCCC-CceEEEecc
Q 009946 272 RLPYPSR-SFELAHCSR 287 (522)
Q Consensus 272 ~lpf~d~-sFDlVv~s~ 287 (522)
.+++++. .||.|+++.
T Consensus 102 ~~~~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 102 LYPWEEVPQGSLLVANL 118 (271)
T ss_dssp GSCGGGSCTTEEEEEEE
T ss_pred hCChhhccCccEEEecC
Confidence 8887643 689888653
No 267
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.80 E-value=1.4e-05 Score=87.14 Aligned_cols=119 Identities=15% Similarity=0.073 Sum_probs=78.5
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhC---CC--------------cccccCcccccHHHHHHH
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DI--------------IAMSLAPNDVHENQIQFA 256 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~v--------------~gvdis~~Dis~a~i~~A 256 (522)
...+.+.+++.. ....+|||.+||+|.|+..+++. .. ....+.+.|+++.+.+.|
T Consensus 156 ~iv~~mv~~l~p--------~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 156 PLIKTIIHLLKP--------QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp HHHHHHHHHHCC--------CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcc--------CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 345556666642 23467999999999988776542 10 123566777788887777
Q ss_pred HHc----CCC------eEEEEeCCCCCC-CCCCCceEEEecccccc--c-----------hhhhHHHHHHHHHhCCCCeE
Q 009946 257 LER----GIP------STLGVLGTKRLP-YPSRSFELAHCSRCRID--W-----------LQRDGILLLELDRLLRPGGY 312 (522)
Q Consensus 257 ~~r----g~~------~~~~~~d~~~lp-f~d~sFDlVv~s~~~l~--~-----------~~d~~~~L~ei~RvLkPGG~ 312 (522)
+.. +.. ..+..+|+...+ .+...||+|+++--... + ......++..+.+.|||||+
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 307 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGR 307 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred HHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCE
Confidence 653 443 567777765443 34568999998642111 0 01123689999999999999
Q ss_pred EEEEeCCC
Q 009946 313 FVYSSPEA 320 (522)
Q Consensus 313 lvis~P~~ 320 (522)
++++.|..
T Consensus 308 ~a~V~p~~ 315 (541)
T 2ar0_A 308 AAVVVPDN 315 (541)
T ss_dssp EEEEEEHH
T ss_pred EEEEecCc
Confidence 99999864
No 268
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.72 E-value=0.00021 Score=72.07 Aligned_cols=107 Identities=17% Similarity=0.218 Sum_probs=74.3
Q ss_pred CCCCeEEEECCCCchHHHHHhhC-CCcccccCcccccHHHHHHHHHc----------CCCeEEEEeCCCCC-CCCCCCce
Q 009946 214 GNIRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALER----------GIPSTLGVLGTKRL-PYPSRSFE 281 (522)
Q Consensus 214 ~~~~~VLDIGCGtG~~a~~La~~-~v~gvdis~~Dis~a~i~~A~~r----------g~~~~~~~~d~~~l-pf~d~sFD 281 (522)
+++++||=||-|.|..+..+++. .+. .++..++.+..++.+++. ..++.+...|.... .-..++||
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~--~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVE--SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCC--EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcc--eEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCC
Confidence 45689999999999999999876 222 344456777888877654 24688888885543 34567899
Q ss_pred EEEeccccccchh----hhHHHHHHHHHhCCCCeEEEEEeCCCCCC
Q 009946 282 LAHCSRCRIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEAYAH 323 (522)
Q Consensus 282 lVv~s~~~l~~~~----d~~~~L~ei~RvLkPGG~lvis~P~~~~~ 323 (522)
+|+.-. .-...+ ...++++.+.++|+|||.++.-....+..
T Consensus 160 vIi~D~-~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~ 204 (294)
T 3o4f_A 160 VIISDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQ 204 (294)
T ss_dssp EEEESC-CCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSC
T ss_pred EEEEeC-CCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccC
Confidence 999532 111111 12569999999999999999865444433
No 269
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.67 E-value=2.3e-05 Score=81.85 Aligned_cols=96 Identities=17% Similarity=0.105 Sum_probs=64.4
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc-------------------CCC-eEEEEeCCCCCCC
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-------------------GIP-STLGVLGTKRLPY 275 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r-------------------g~~-~~~~~~d~~~lpf 275 (522)
..+|||+|||+|.++..++.+. .+..+...|+++.+++.+++. +.. +.+...|+..+..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 3679999999999999988651 122344556666665555432 443 6777777654321
Q ss_pred -CCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 276 -PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 276 -~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
..+.||+|+..- + .....++..+.+.|||||.++++.
T Consensus 127 ~~~~~fD~I~lDP----~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP----F-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC----C-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 135799999432 1 123578999999999999988875
No 270
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.67 E-value=3.1e-05 Score=76.68 Aligned_cols=77 Identities=13% Similarity=0.092 Sum_probs=48.6
Q ss_pred CeEEEEeCCCC-CCC-CC---CCceEEEeccccccchhh--hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHH
Q 009946 262 PSTLGVLGTKR-LPY-PS---RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAM 334 (522)
Q Consensus 262 ~~~~~~~d~~~-lpf-~d---~sFDlVv~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l 334 (522)
++.+..+|+.+ ++. ++ ..||+|+.-...-.-.++ ...+|.++.++|||||.|+.-+. . ..+
T Consensus 151 ~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysa-----a-------~~v 218 (257)
T 2qy6_A 151 TLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS-----A-------GFV 218 (257)
T ss_dssp EEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCC-----B-------HHH
T ss_pred EEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeC-----C-------HHH
Confidence 35577777544 442 22 279999963211111222 25799999999999999985221 1 246
Q ss_pred HHHHHhcCcEEEEEec
Q 009946 335 YDLLKSMCWKIVSKKD 350 (522)
Q Consensus 335 ~~l~~~~g~~~v~~~~ 350 (522)
.+.+..+||++.+..+
T Consensus 219 rr~L~~aGF~v~~~~g 234 (257)
T 2qy6_A 219 RRGLQEAGFTMQKRKG 234 (257)
T ss_dssp HHHHHHHTEEEEEECC
T ss_pred HHHHHHCCCEEEeCCC
Confidence 6777889999876443
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.63 E-value=0.00017 Score=70.80 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=55.7
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc-CCCeEEEEeCCCC
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKR 272 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r-g~~~~~~~~d~~~ 272 (522)
...+.+.+.+... ...+|||||||+|.++..|+++. +..+.+.|+++.+++.++++ ..++.+..+|+..
T Consensus 18 ~i~~~iv~~~~~~--------~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~ 87 (249)
T 3ftd_A 18 GVLKKIAEELNIE--------EGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSIGDERLEVINEDASK 87 (249)
T ss_dssp HHHHHHHHHTTCC--------TTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTT
T ss_pred HHHHHHHHhcCCC--------CcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhccCCCeEEEEcchhh
Confidence 4555666666532 34689999999999999999862 24666778888898888776 2357889999999
Q ss_pred CCCCC
Q 009946 273 LPYPS 277 (522)
Q Consensus 273 lpf~d 277 (522)
+++++
T Consensus 88 ~~~~~ 92 (249)
T 3ftd_A 88 FPFCS 92 (249)
T ss_dssp CCGGG
T ss_pred CChhH
Confidence 88764
No 272
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.63 E-value=0.00065 Score=70.47 Aligned_cols=121 Identities=8% Similarity=-0.091 Sum_probs=74.3
Q ss_pred CCCeEEEECCCCchHHHHHhhC--CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~--~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~ 292 (522)
++.+|||+||++|+++..|+++ .|+++|..+.+ +.. ....++.+...|...+..+.+.||+|+|-. +..
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~--~~l-----~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm-~~~- 281 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMA--QSL-----MDTGQVTWLREDGFKFRPTRSNISWMVCDM-VEK- 281 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCC--HHH-----HTTTCEEEECSCTTTCCCCSSCEEEEEECC-SSC-
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcC--hhh-----ccCCCeEEEeCccccccCCCCCcCEEEEcC-CCC-
Confidence 4578999999999999999977 46666655433 221 223568888888888777777899999765 222
Q ss_pred hhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcE
Q 009946 293 LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWK 344 (522)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~ 344 (522)
......++..+...+..++.++..-.....+..+.......+.+.++..|+.
T Consensus 282 p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 282 PAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGIN 333 (375)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcc
Confidence 2222233444334444445444332322222233334556777788888875
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.62 E-value=6.6e-05 Score=75.12 Aligned_cols=76 Identities=13% Similarity=0.149 Sum_probs=52.8
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCc-ccccCcccccHHHHHHHHHc-CCCeEEEEeCCC
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDII-AMSLAPNDVHENQIQFALER-GIPSTLGVLGTK 271 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~-gvdis~~Dis~a~i~~A~~r-g~~~~~~~~d~~ 271 (522)
...+.+.+.+... ...+|||||||+|.++..|+++... ...+.+.|+++.+++.++++ ..++.+..+|+.
T Consensus 29 ~i~~~iv~~~~~~--------~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~ 100 (279)
T 3uzu_A 29 GVIDAIVAAIRPE--------RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHCCC--------TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGG
T ss_pred HHHHHHHHhcCCC--------CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChh
Confidence 3455666666532 3468999999999999999875100 01145556777777777766 456889999998
Q ss_pred CCCCCC
Q 009946 272 RLPYPS 277 (522)
Q Consensus 272 ~lpf~d 277 (522)
.+++++
T Consensus 101 ~~~~~~ 106 (279)
T 3uzu_A 101 TFDFGS 106 (279)
T ss_dssp GCCGGG
T ss_pred cCChhH
Confidence 888753
No 274
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.60 E-value=4.8e-05 Score=79.76 Aligned_cols=98 Identities=12% Similarity=0.099 Sum_probs=64.8
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCC---eEEEEeCCCCCC--CCCCCceEEEec
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIP---STLGVLGTKRLP--YPSRSFELAHCS 286 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~---~~~~~~d~~~lp--f~d~sFDlVv~s 286 (522)
..+|||++||+|.++..++.+.--+-.+..+|+++.+++.+++. +.. +.+..+|+.++. ...+.||+|++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 36899999999999999886310112344445555555555433 543 777777754321 113579999964
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
- + .....++..+.+.|+|||.++++..
T Consensus 133 P----~-g~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 133 P----F-GTPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp C----S-SCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred C----C-cCHHHHHHHHHHHhCCCCEEEEEec
Confidence 3 1 1234689999999999999988763
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.51 E-value=0.00028 Score=79.27 Aligned_cols=103 Identities=20% Similarity=0.105 Sum_probs=66.4
Q ss_pred CCeEEEECCCCchHHHHHhhC--CC---------------------------------------cccccCcccccHHHHH
Q 009946 216 IRNVLDVGCGVASFGAYLLSH--DI---------------------------------------IAMSLAPNDVHENQIQ 254 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~--~v---------------------------------------~gvdis~~Dis~a~i~ 254 (522)
..+|||.+||+|.++...+.. ++ ....+.+.|+++.+++
T Consensus 191 ~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~ 270 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQ 270 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHH
Confidence 367999999999988765531 00 0134666777777777
Q ss_pred HHHHc----CCC--eEEEEeCCCCCC--CCCCCceEEEeccc---cccchhhhHH---HHHHHHHhCCCCeEEEEEeC
Q 009946 255 FALER----GIP--STLGVLGTKRLP--YPSRSFELAHCSRC---RIDWLQRDGI---LLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 255 ~A~~r----g~~--~~~~~~d~~~lp--f~d~sFDlVv~s~~---~l~~~~d~~~---~L~ei~RvLkPGG~lvis~P 318 (522)
.|+++ |.. +.+...|+.++. ..+++||+|+++-- .+.-..+... .|.++.+.+.|||.+++.++
T Consensus 271 ~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 271 RARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 77654 553 688999987774 33448999998732 1111122233 35555566679999999876
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.49 E-value=4e-05 Score=85.21 Aligned_cols=97 Identities=11% Similarity=0.074 Sum_probs=59.8
Q ss_pred CCeEEEECCCCchHHHHH------hh---------C--CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCC--
Q 009946 216 IRNVLDVGCGVASFGAYL------LS---------H--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-- 276 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~L------a~---------~--~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~-- 276 (522)
...|||||||+|.+.... ++ . .|.+++-++......+...+..-+..+.++.++++++..|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 357999999999885321 12 1 4455544432221111111111134589999999888763
Q ss_pred ---CCCceEEEeccccccchhhh---HHHHHHHHHhCCCCeEEE
Q 009946 277 ---SRSFELAHCSRCRIDWLQRD---GILLLELDRLLRPGGYFV 314 (522)
Q Consensus 277 ---d~sFDlVv~s~~~l~~~~d~---~~~L~ei~RvLkPGG~lv 314 (522)
.+..|+|++-. +.+..+. .+.|..+.|.|||||.++
T Consensus 490 ~~~~ekVDIIVSEl--mGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSEL--LGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECC--CBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEec--cccccchhccHHHHHHHHHhCCCCcEEE
Confidence 46899999643 3333222 468888899999999876
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.49 E-value=0.00014 Score=79.34 Aligned_cols=119 Identities=14% Similarity=0.091 Sum_probs=76.3
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhC------C--------CcccccCcccccHHHHHHHHH
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH------D--------IIAMSLAPNDVHENQIQFALE 258 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~------~--------v~gvdis~~Dis~a~i~~A~~ 258 (522)
...++.+.+++... ..+|||.+||+|.|...+++. . .....+.+.|+.+.+.+.|+.
T Consensus 231 ~~Vv~lmv~ll~p~---------~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 231 KSIVTLIVEMLEPY---------KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp HHHHHHHHHHHCCC---------SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---------CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 44556666666421 238999999999888766431 0 013456677777777777765
Q ss_pred c----CCCeEE--EEeCCCCCC-CCCCCceEEEeccccc--cch----------------------h---h-hHHHHHHH
Q 009946 259 R----GIPSTL--GVLGTKRLP-YPSRSFELAHCSRCRI--DWL----------------------Q---R-DGILLLEL 303 (522)
Q Consensus 259 r----g~~~~~--~~~d~~~lp-f~d~sFDlVv~s~~~l--~~~----------------------~---d-~~~~L~ei 303 (522)
. +....+ ..+|....+ +++..||+|+++--.. .|. + + .-.++..+
T Consensus 302 Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~ 381 (544)
T 3khk_A 302 NMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHM 381 (544)
T ss_dssp HHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHH
T ss_pred HHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHH
Confidence 3 544333 556644443 4567899999853211 110 0 0 12589999
Q ss_pred HHhCCCCeEEEEEeCCC
Q 009946 304 DRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 304 ~RvLkPGG~lvis~P~~ 320 (522)
.+.|+|||+++++.|..
T Consensus 382 l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 382 LYHLAPTGSMALLLANG 398 (544)
T ss_dssp HHTEEEEEEEEEEEETH
T ss_pred HHHhccCceEEEEecch
Confidence 99999999999999874
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.45 E-value=0.00051 Score=74.91 Aligned_cols=125 Identities=14% Similarity=0.111 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhC--CCcccccCcccccHHHHHHHHHc----CC---Ce
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER----GI---PS 263 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~v~gvdis~~Dis~a~i~~A~~r----g~---~~ 263 (522)
....+.+.+++..... .....+|||.+||+|.|...+++. ......+.+.|+.+.+.+.|+.. |. +.
T Consensus 203 ~~Vv~lmv~ll~~~~~----~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~ 278 (542)
T 3lkd_A 203 QPVAKLMTQIAFLGRE----DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQ 278 (542)
T ss_dssp HHHHHHHHHHHHTTCT----TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHhcccC----CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCcc
Confidence 3355566666653210 134578999999999888776543 11234566677777777777643 54 35
Q ss_pred EEEEeCCCCC--C-CCCCCceEEEecccc-ccc-----------------h---hh-hHHHHHHHHHhCC-CCeEEEEEe
Q 009946 264 TLGVLGTKRL--P-YPSRSFELAHCSRCR-IDW-----------------L---QR-DGILLLELDRLLR-PGGYFVYSS 317 (522)
Q Consensus 264 ~~~~~d~~~l--p-f~d~sFDlVv~s~~~-l~~-----------------~---~d-~~~~L~ei~RvLk-PGG~lvis~ 317 (522)
.+..+|+... | .+...||+|+++--. ..| . .+ .-.++..+.+.|+ |||++.++.
T Consensus 279 ~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 279 FLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp EEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred ceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 7788886655 4 456789999985210 011 0 00 1248999999999 999999999
Q ss_pred CCCC
Q 009946 318 PEAY 321 (522)
Q Consensus 318 P~~~ 321 (522)
|..+
T Consensus 359 P~g~ 362 (542)
T 3lkd_A 359 PHGV 362 (542)
T ss_dssp ETHH
T ss_pred cchH
Confidence 8753
No 279
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.39 E-value=0.0001 Score=72.81 Aligned_cols=69 Identities=16% Similarity=0.121 Sum_probs=49.1
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccH-------HHHHHHHHc----C--CCeEEEEeCCCCC-C-CCC--C
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHE-------NQIQFALER----G--IPSTLGVLGTKRL-P-YPS--R 278 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~-------a~i~~A~~r----g--~~~~~~~~d~~~l-p-f~d--~ 278 (522)
..+|||+|||+|.++..|+.. +..+.+.|+++ .+++.|+++ + .++.+..+|..++ + +++ +
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred cCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 357999999999999999875 23455556666 666666543 2 2488888887653 3 444 6
Q ss_pred CceEEEecc
Q 009946 279 SFELAHCSR 287 (522)
Q Consensus 279 sFDlVv~s~ 287 (522)
+||+|++..
T Consensus 161 ~fD~V~~dP 169 (258)
T 2r6z_A 161 KPDIVYLDP 169 (258)
T ss_dssp CCSEEEECC
T ss_pred CccEEEECC
Confidence 899999865
No 280
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.38 E-value=0.00015 Score=72.25 Aligned_cols=100 Identities=17% Similarity=0.138 Sum_probs=57.5
Q ss_pred CCeEEEECCCCchHHHHHhhC----CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEecccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~----~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~ 291 (522)
..+|||+|||+|.++.+.+.. .+.++++.......+ +.. ...+.++.....+.....++.+.+|+|+|-.+ ..
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~p-i~~-~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmA-pn 167 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKP-IMR-TTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIG-ES 167 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCC-CCC-CBTTGGGEEEECSCCGGGSCCCCCSEEEECCC-CC
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccc-ccc-ccCCCceEEeeCCcchhhcCCCCcCEEEecCc-cC
Confidence 358999999999999988754 233444432110000 000 00122333333333333455678999998552 33
Q ss_pred ----chhhhH--HHHHHHHHhCCCC--eEEEEEeC
Q 009946 292 ----WLQRDG--ILLLELDRLLRPG--GYFVYSSP 318 (522)
Q Consensus 292 ----~~~d~~--~~L~ei~RvLkPG--G~lvis~P 318 (522)
+.+... .+|.-+.++|+|| |.|++-.-
T Consensus 168 sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF 202 (282)
T 3gcz_A 168 SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVL 202 (282)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEES
T ss_pred CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence 222222 3577778999999 99999763
No 281
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.38 E-value=0.00018 Score=70.81 Aligned_cols=80 Identities=8% Similarity=0.005 Sum_probs=54.7
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccc--cCcccccHHHHHHHHHcC---CCeEEEEe
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMS--LAPNDVHENQIQFALERG---IPSTLGVL 268 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvd--is~~Dis~a~i~~A~~rg---~~~~~~~~ 268 (522)
...+.+.+.+... ...+|||||||+|.++. +... .. +.+.|+++.+++.++++. .++.+..+
T Consensus 8 ~i~~~iv~~~~~~--------~~~~VLEIG~G~G~lt~-l~~~----~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~ 74 (252)
T 1qyr_A 8 FVIDSIVSAINPQ--------KGQAMVEIGPGLAALTE-PVGE----RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQ 74 (252)
T ss_dssp HHHHHHHHHHCCC--------TTCCEEEECCTTTTTHH-HHHT----TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECS
T ss_pred HHHHHHHHhcCCC--------CcCEEEEECCCCcHHHH-hhhC----CCCeEEEEECCHHHHHHHHHHhccCCceEEEEC
Confidence 3455566666532 23579999999999999 6542 23 566688888888888763 26788999
Q ss_pred CCCCCCCCCC-----CceEEEec
Q 009946 269 GTKRLPYPSR-----SFELAHCS 286 (522)
Q Consensus 269 d~~~lpf~d~-----sFDlVv~s 286 (522)
|+..+++++. ..|.|+++
T Consensus 75 D~~~~~~~~~~~~~~~~~~vvsN 97 (252)
T 1qyr_A 75 DAMTFNFGELAEKMGQPLRVFGN 97 (252)
T ss_dssp CGGGCCHHHHHHHHTSCEEEEEE
T ss_pred chhhCCHHHhhcccCCceEEEEC
Confidence 9888876532 24566644
No 282
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.33 E-value=0.00083 Score=67.42 Aligned_cols=102 Identities=16% Similarity=0.188 Sum_probs=58.0
Q ss_pred CCCeEEEECCCCchHHHHHhhC----CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~----~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l 290 (522)
+..+|||+||++|.|+..++++ .|.++++...+...... ....+.++.....+..-..++.+.+|+|+|..+ .
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~--~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A-P 157 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH--MQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG-E 157 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--CCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-C
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc--ccccCCceEEeecCceeeecCCCCcCEEeecCc-C
Confidence 4578999999999999999975 23444443211000000 000011222222223333345678999998542 3
Q ss_pred c----chhhh--HHHHHHHHHhCCCC-eEEEEEeCC
Q 009946 291 D----WLQRD--GILLLELDRLLRPG-GYFVYSSPE 319 (522)
Q Consensus 291 ~----~~~d~--~~~L~ei~RvLkPG-G~lvis~P~ 319 (522)
. ..+.. ..+|.-+.++|+|| |.|++-.-.
T Consensus 158 nsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 158 SSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 3 11111 23577778999999 999997633
No 283
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.31 E-value=0.00016 Score=73.23 Aligned_cols=71 Identities=14% Similarity=0.098 Sum_probs=53.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----CCCeEEEEeCCCCCC--CC---CCCceEEEec
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLP--YP---SRSFELAHCS 286 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g~~~~~~~~d~~~lp--f~---d~sFDlVv~s 286 (522)
..+|||+|||+|.++..++++.- +..+.+.|.++.+++.|+++ +.++.+..+|...++ ++ .++||.|++.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMD 105 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEEc
Confidence 46899999999999999987621 34667778888888888775 356888998887765 11 1579999864
Q ss_pred c
Q 009946 287 R 287 (522)
Q Consensus 287 ~ 287 (522)
.
T Consensus 106 ~ 106 (301)
T 1m6y_A 106 L 106 (301)
T ss_dssp C
T ss_pred C
Confidence 3
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.28 E-value=0.00044 Score=78.10 Aligned_cols=107 Identities=12% Similarity=0.104 Sum_probs=66.7
Q ss_pred CCCeEEEECCCCchHHHHHhhCC--CcccccCcccccHHHHHHH--HH--------cCCCe-EEEEeCCCCC-CCCCCCc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHD--IIAMSLAPNDVHENQIQFA--LE--------RGIPS-TLGVLGTKRL-PYPSRSF 280 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~--v~gvdis~~Dis~a~i~~A--~~--------rg~~~-~~~~~d~~~l-pf~d~sF 280 (522)
...+|||.|||+|.++..++.+. .....+.+.|+++.+++.| +. .+... .+...+.... +...+.|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 34689999999999999887641 1123455666666666666 22 12222 3443333332 2335689
Q ss_pred eEEEecccccc-ch--h------------------------h-hHHHHHHHHHhCCCCeEEEEEeCCCC
Q 009946 281 ELAHCSRCRID-WL--Q------------------------R-DGILLLELDRLLRPGGYFVYSSPEAY 321 (522)
Q Consensus 281 DlVv~s~~~l~-~~--~------------------------d-~~~~L~ei~RvLkPGG~lvis~P~~~ 321 (522)
|+|+++--... +. . + ...++..+.+.|+|||+++++.|..+
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH
Confidence 99998642111 00 0 0 13478889999999999999998764
No 285
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.17 E-value=0.00019 Score=75.61 Aligned_cols=102 Identities=13% Similarity=-0.048 Sum_probs=63.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc------CC-CeEEEEeCCCCC-CC-CCCCceEEEec
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER------GI-PSTLGVLGTKRL-PY-PSRSFELAHCS 286 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r------g~-~~~~~~~d~~~l-pf-~d~sFDlVv~s 286 (522)
..+|||+|||+|..+..|+.. +..+.+.|+++.+++.|+++ +. ++.+..+|+.+. +. ++++||+|++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 478999999999999999876 33455556666666666544 43 578888887664 32 23579999984
Q ss_pred cc-------cccchhhhHHHHHHHHHhC-CCCeEEEEEeCCC
Q 009946 287 RC-------RIDWLQRDGILLLELDRLL-RPGGYFVYSSPEA 320 (522)
Q Consensus 287 ~~-------~l~~~~d~~~~L~ei~RvL-kPGG~lvis~P~~ 320 (522)
-. .+....+...-+.++.+.| +.+..+++-.++.
T Consensus 171 PPrr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP~ 212 (410)
T 3ll7_A 171 PARRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSPM 212 (410)
T ss_dssp CEEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECTT
T ss_pred CCCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCCC
Confidence 21 1222333233455555544 3445666666554
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.06 E-value=0.0025 Score=63.75 Aligned_cols=135 Identities=12% Similarity=0.077 Sum_probs=78.9
Q ss_pred CCCeEEEECCCCchHHHHHh---------hCCCcccccCccc------------------------cc-HHHHHHHHHcC
Q 009946 215 NIRNVLDVGCGVASFGAYLL---------SHDIIAMSLAPND------------------------VH-ENQIQFALERG 260 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La---------~~~v~gvdis~~D------------------------is-~a~i~~A~~rg 260 (522)
.++.|||+|+..|..+..|+ ++.++++|..... .. +...+..++.|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 35789999999998777664 3356666643210 01 11112222334
Q ss_pred ---CCeEEEEeCCC-CCC-CCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHH
Q 009946 261 ---IPSTLGVLGTK-RLP-YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMY 335 (522)
Q Consensus 261 ---~~~~~~~~d~~-~lp-f~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~ 335 (522)
.++.+..+++. .+| +++++||+|+.-.. .-......|..+...|+|||++++-+-.. .+.... .+.
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~y~~~~~~Le~~~p~L~pGGiIv~DD~~~---~~G~~~---Av~ 256 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---LYESTWDTLTNLYPKVSVGGYVIVDDYMM---CPPCKD---AVD 256 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---SHHHHHHHHHHHGGGEEEEEEEEESSCTT---CHHHHH---HHH
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---ccccHHHHHHHHHhhcCCCEEEEEcCCCC---CHHHHH---HHH
Confidence 35888888843 344 44578999995431 12233568999999999999999865421 133333 444
Q ss_pred HHHHhcCc--EEEEEecceEEEecc
Q 009946 336 DLLKSMCW--KIVSKKDQTVIWAKP 358 (522)
Q Consensus 336 ~l~~~~g~--~~v~~~~~~~iw~Kp 358 (522)
++.++.++ .+.......+.|+|+
T Consensus 257 Ef~~~~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 257 EYRAKFDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp HHHHHTTCCSCCEECSSSCEEEECC
T ss_pred HHHHhcCCceEEEEecCEEEEEEeC
Confidence 44555554 333334445677764
No 287
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.05 E-value=0.0033 Score=59.94 Aligned_cols=90 Identities=7% Similarity=-0.042 Sum_probs=55.6
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHH----cCC----CeEEEEeCCCC---------------
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALE----RGI----PSTLGVLGTKR--------------- 272 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~----rg~----~~~~~~~d~~~--------------- 272 (522)
.++||||||| ..+..|++. . +..+...+.++...+.|++ .+. ++.+..+++..
T Consensus 31 a~~VLEiGtG--ySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCEEEEECch--HHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 3689999985 566666653 1 2334444555555555543 243 46777777433
Q ss_pred CC--------C-CCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEE
Q 009946 273 LP--------Y-PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVY 315 (522)
Q Consensus 273 lp--------f-~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi 315 (522)
++ . ..++||+|+.-.. . ....+..+.+.|+|||.+++
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~-k-----~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGR-F-----RVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSS-S-----HHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHhhhhhccccCCCCCEEEEeCC-C-----chhHHHHHHHhcCCCeEEEE
Confidence 22 1 2368999995431 1 12566667799999999966
No 288
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.01 E-value=0.0064 Score=59.88 Aligned_cols=99 Identities=18% Similarity=0.206 Sum_probs=53.9
Q ss_pred CCCeEEEECCCCchHHHHHhhC-CC---cccccCcccccHHHHHHHHHcCCCe-EEEEe-CCCCCCCCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH-DI---IAMSLAPNDVHENQIQFALERGIPS-TLGVL-GTKRLPYPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~-~v---~gvdis~~Dis~a~i~~A~~rg~~~-~~~~~-d~~~lpf~d~sFDlVv~s~~ 288 (522)
+..+|||+||+.|+++.+.++. .+ .|..+ +.|++..-+.. ...|.++ .+..+ |+.+++ ...+|+|+|-.+
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vi-g~D~~~~P~~~-~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLSDMA 148 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTK-GGPGHEEPMLM-QSYGWNIVTMKSGVDVFYKP--SEISDTLLCDIG 148 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECC-CSTTSCCCCCC-CSTTGGGEEEECSCCGGGSC--CCCCSEEEECCC
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEE-ccccccCCCcc-cCCCceEEEeeccCCccCCC--CCCCCEEEeCCC
Confidence 3578999999999999999875 11 22222 22210000000 0012222 33334 766543 457999998431
Q ss_pred c--ccchhhhH---HHHHHHHHhCCCCe-EEEEEe
Q 009946 289 R--IDWLQRDG---ILLLELDRLLRPGG-YFVYSS 317 (522)
Q Consensus 289 ~--l~~~~d~~---~~L~ei~RvLkPGG-~lvis~ 317 (522)
- -+..-|.. .+|.-+.++|+||| .|++-.
T Consensus 149 PnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 149 ESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEE
Confidence 1 11111111 15666779999999 888865
No 289
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.71 E-value=0.0014 Score=68.13 Aligned_cols=101 Identities=10% Similarity=0.009 Sum_probs=68.2
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCC-------------CeEEEEeCCCCC----CCCC
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI-------------PSTLGVLGTKRL----PYPS 277 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~-------------~~~~~~~d~~~l----pf~d 277 (522)
++++||=||.|.|..+..+++... -.++..++.+..++.|++... ++.+...|.... .-..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~--~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhcCC--ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 357899999999999999987643 345566888899999987521 245666664322 1124
Q ss_pred CCceEEEeccc-----cccc----hhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 278 RSFELAHCSRC-----RIDW----LQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 278 ~sFDlVv~s~~-----~l~~----~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
+.||+|+.-.. .... ..-..++++.+.++|+|||.++.-.
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 57999995310 0000 0112468899999999999998754
No 290
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=96.48 E-value=0.00078 Score=66.62 Aligned_cols=90 Identities=11% Similarity=-0.001 Sum_probs=52.1
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHH-------HHHHHHc----C---CCeEEEEeCCCC-CCCCCCCce
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQ-------IQFALER----G---IPSTLGVLGTKR-LPYPSRSFE 281 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~-------i~~A~~r----g---~~~~~~~~d~~~-lpf~d~sFD 281 (522)
.+|||+|||+|..+..++.+ +..+...|.++.+ ++.+++. + .++.+..+|..+ ++....+||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCC
Confidence 67999999999999999875 2234444555533 2222211 1 247788888554 332224699
Q ss_pred EEEeccccccchhhhHHHHHHHHHhCCCCe
Q 009946 282 LAHCSRCRIDWLQRDGILLLELDRLLRPGG 311 (522)
Q Consensus 282 lVv~s~~~l~~~~d~~~~L~ei~RvLkPGG 311 (522)
+|++... .++. ....++++..++|++.+
T Consensus 167 vV~lDP~-y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 167 VVYLDPM-FPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEECCC-CCCC-CC-----HHHHHHHHHS
T ss_pred EEEEcCC-CCCc-ccchHHHHHHHHHHHhh
Confidence 9997653 4432 22356667777777655
No 291
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.35 E-value=0.0021 Score=58.21 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=48.8
Q ss_pred CCeEEEECCCCc-hHHHHHhh-C--CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCC--CCceEEEecccc
Q 009946 216 IRNVLDVGCGVA-SFGAYLLS-H--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS--RSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG-~~a~~La~-~--~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d--~sFDlVv~s~~~ 289 (522)
..+|||||||.| ..+..|++ . .|+++|+++..+. +...|+.+ |..+ +.||+|.+.+.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------------~v~dDiF~-P~~~~Y~~~DLIYsirP- 98 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------------IVRDDITS-PRMEIYRGAALIYSIRP- 98 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------------EECCCSSS-CCHHHHTTEEEEEEESC-
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------------eEEccCCC-CcccccCCcCEEEEcCC-
Confidence 368999999999 69999986 5 3455555554432 55556544 3222 37999986653
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEE
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYS 316 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis 316 (522)
.++....+.++.+... .-++|.
T Consensus 99 ---P~El~~~i~~lA~~v~--adliI~ 120 (153)
T 2k4m_A 99 ---PAEIHSSLMRVADAVG--ARLIIK 120 (153)
T ss_dssp ---CTTTHHHHHHHHHHHT--CEEEEE
T ss_pred ---CHHHHHHHHHHHHHcC--CCEEEE
Confidence 3444555666655443 445543
No 292
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.35 E-value=0.0063 Score=62.93 Aligned_cols=105 Identities=17% Similarity=0.106 Sum_probs=67.7
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc----C-------CCeEEEEeCCCCCC-CCCCCceE
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----G-------IPSTLGVLGTKRLP-YPSRSFEL 282 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r----g-------~~~~~~~~d~~~lp-f~d~sFDl 282 (522)
.+.+|||+.+|.|.=+.+|++..- .-.+...|+++..++..+++ + .++.+...|...++ ...+.||.
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 457899999999988888876421 12355667776665544332 2 24666666766554 34478999
Q ss_pred EEe----ccc---ccc------c--hhh--------hHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 283 AHC----SRC---RID------W--LQR--------DGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 283 Vv~----s~~---~l~------~--~~d--------~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
|++ |.. ++. | .+. ...+|..+.+.|||||+++.++=..
T Consensus 227 VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 227 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 995 321 111 1 111 1358889999999999999988443
No 293
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.27 E-value=0.016 Score=62.91 Aligned_cols=120 Identities=14% Similarity=0.150 Sum_probs=72.4
Q ss_pred HHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhC---CCc---------ccccCcccccHHHHHHHHHc-
Q 009946 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DII---------AMSLAPNDVHENQIQFALER- 259 (522)
Q Consensus 193 ~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~v~---------gvdis~~Dis~a~i~~A~~r- 259 (522)
...++.+.+++.. ....+|+|-.||+|.|.....++ ... ...+.+.++.+.+...|+..
T Consensus 203 ~~Vv~lmv~l~~p--------~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 203 RPVVRFMVEVMDP--------QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp HHHHHHHHHHHCC--------CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcc--------CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 4566677777753 23357999999999987665431 100 12345556666666666532
Q ss_pred ---CC-CeEEEEeCCCCCCC----CCCCceEEEeccccc-cch-------------hh-hHHHHHHHHHhCC-------C
Q 009946 260 ---GI-PSTLGVLGTKRLPY----PSRSFELAHCSRCRI-DWL-------------QR-DGILLLELDRLLR-------P 309 (522)
Q Consensus 260 ---g~-~~~~~~~d~~~lpf----~d~sFDlVv~s~~~l-~~~-------------~d-~~~~L~ei~RvLk-------P 309 (522)
|. ...+...|....|. +...||+|+++--.- .+. .+ .-.++..+.+.|| |
T Consensus 275 ~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~ 354 (530)
T 3ufb_A 275 LLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN 354 (530)
T ss_dssp HHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS
T ss_pred HhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC
Confidence 44 34666667655443 235799999853210 000 01 1236777788886 7
Q ss_pred CeEEEEEeCCC
Q 009946 310 GGYFVYSSPEA 320 (522)
Q Consensus 310 GG~lvis~P~~ 320 (522)
||++.++.|..
T Consensus 355 gGr~avVlP~g 365 (530)
T 3ufb_A 355 GGRAAVVVPNG 365 (530)
T ss_dssp CCEEEEEEEHH
T ss_pred CceEEEEecch
Confidence 99999999863
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.04 E-value=0.015 Score=58.28 Aligned_cols=100 Identities=17% Similarity=0.230 Sum_probs=59.9
Q ss_pred CCeEEEECCCCchHHHHHhhC----CCcccccCcccccHHHHHHHHHcCCC-eEEEEe-CCCCCCCCCCCceEEEecccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIP-STLGVL-GTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~----~v~gvdis~~Dis~a~i~~A~~rg~~-~~~~~~-d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+|||+||++|.++.+.+.. .|.++|+-..+..+.+.- +..+-+ +.+... |+..++. ..+|+|+|-..
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~--~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig- 169 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLV--QSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG- 169 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCC--CBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC-
T ss_pred CCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchh--hhcCCcceEEEeccCHhhCCC--CCCCEEEEECc-
Confidence 358999999999999987754 466676655432111100 011112 445444 5556654 56999998542
Q ss_pred ccchhhh-------HHHHHHHHHhCCCC-eEEEEEeCCCC
Q 009946 290 IDWLQRD-------GILLLELDRLLRPG-GYFVYSSPEAY 321 (522)
Q Consensus 290 l~~~~d~-------~~~L~ei~RvLkPG-G~lvis~P~~~ 321 (522)
+-.+++ -.+|.-+.+.|++| |-|++-.-..|
T Consensus 170 -eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY 208 (321)
T 3lkz_A 170 -ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY 208 (321)
T ss_dssp -CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred -cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC
Confidence 222221 12566667889999 99998765443
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=95.53 E-value=0.026 Score=54.96 Aligned_cols=100 Identities=15% Similarity=0.144 Sum_probs=60.6
Q ss_pred CCeEEEECCCCchHHHHHhhC----CCcccccCcccccHHHHHHHHHcCC-CeEEEEe-CCCCCCCCCCCceEEEecccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI-PSTLGVL-GTKRLPYPSRSFELAHCSRCR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~----~v~gvdis~~Dis~a~i~~A~~rg~-~~~~~~~-d~~~lpf~d~sFDlVv~s~~~ 289 (522)
..+|||+||++|.++.+.+.. .|.++|+-+.+..+.+. .+..|- .+.|... |...++- ..+|.|+|-..=
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~--~~s~gwn~v~fk~gvDv~~~~~--~~~DtllcDIge 154 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVP--MSTYGWNIVKLMSGKDVFYLPP--EKCDTLLCDIGE 154 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC--CCCTTTTSEEEECSCCGGGCCC--CCCSEEEECCCC
T ss_pred CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcch--hhhcCcCceEEEeccceeecCC--ccccEEEEecCC
Confidence 358999999999999987754 46677776654321111 012232 3566666 6555543 569999985421
Q ss_pred ---ccchhhh--HHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 290 ---IDWLQRD--GILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 290 ---l~~~~d~--~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
...++.. -.+|.-+.+.|++ |.|++-.-..
T Consensus 155 Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~p 189 (267)
T 3p8z_A 155 SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNP 189 (267)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCC
T ss_pred CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccC
Confidence 1111111 1256666788998 7888866443
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.48 E-value=0.019 Score=57.38 Aligned_cols=94 Identities=20% Similarity=0.239 Sum_probs=58.3
Q ss_pred CeEEEEeCCCC-CC-CCCCCceEEEeccccc---c----------------chhhhHHHHHHHHHhCCCCeEEEEEeCCC
Q 009946 262 PSTLGVLGTKR-LP-YPSRSFELAHCSRCRI---D----------------WLQRDGILLLELDRLLRPGGYFVYSSPEA 320 (522)
Q Consensus 262 ~~~~~~~d~~~-lp-f~d~sFDlVv~s~~~l---~----------------~~~d~~~~L~ei~RvLkPGG~lvis~P~~ 320 (522)
...+..+|..+ +. +++++||+|+++---. . +......++.++.|+|||||.+++...+.
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDV 100 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 35677777544 22 4678999999863211 1 11223457889999999999999987643
Q ss_pred CC-CChh----HHHHHHHHHHHHHhcCcEEEEEecceEEEeccC
Q 009946 321 YA-HDPE----NRRIWNAMYDLLKSMCWKIVSKKDQTVIWAKPI 359 (522)
Q Consensus 321 ~~-~~~e----~~~~~~~l~~l~~~~g~~~v~~~~~~~iw~Kp~ 359 (522)
.. .... .......+..++++.||.... ..+|.|+.
T Consensus 101 ~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~----~iiW~K~~ 140 (297)
T 2zig_A 101 AVARRRFGRHLVFPLHADIQVRCRKLGFDNLN----PIIWHKHT 140 (297)
T ss_dssp EEECC----EEEECHHHHHHHHHHHTTCEEEE----EEEEECC-
T ss_pred ccccccCCcccccccHHHHHHHHHHcCCeeec----cEEEeCCC
Confidence 21 0000 011234577788899997763 45899874
No 297
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.05 E-value=0.0037 Score=79.27 Aligned_cols=102 Identities=14% Similarity=0.227 Sum_probs=40.9
Q ss_pred CCeEEEECCCCchHHHHHhhC----CCcccccCcccccHHHHHHHHHc--CCCeEEEEeCCCCC-CCCCCCceEEEeccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER--GIPSTLGVLGTKRL-PYPSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~----~v~gvdis~~Dis~a~i~~A~~r--g~~~~~~~~d~~~l-pf~d~sFDlVv~s~~ 288 (522)
..+||+||.|+|..+..+.+. .....+++-.|++....+.|+++ ...+.....|.... ++..++||+|++++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~- 1319 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC- 1319 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC-
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc-
Confidence 358999999999765544321 11112333334443332222222 11222222233332 34557899999888
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
++|-..+....|.+++++|||||++++...
T Consensus 1320 vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1320 ALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp C--------------------CCEEEEEEC
T ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 577778888899999999999999988653
No 298
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.52 E-value=0.061 Score=54.31 Aligned_cols=77 Identities=10% Similarity=0.018 Sum_probs=49.9
Q ss_pred eEEEEeCCCC-CC-CCCCCceEEEeccccccchhhh--HHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHH
Q 009946 263 STLGVLGTKR-LP-YPSRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLL 338 (522)
Q Consensus 263 ~~~~~~d~~~-lp-f~d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~ 338 (522)
..+..+|+.. ++ +++..||+|+--...-.-.++. ..++..++++++|||.|+--+- -..+++-+
T Consensus 168 L~l~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYta------------ag~VRR~L 235 (308)
T 3vyw_A 168 LKVLLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSS------------SLSVRKSL 235 (308)
T ss_dssp EEEEESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCC------------CHHHHHHH
T ss_pred EEEEechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeC------------cHHHHHHH
Confidence 3556666432 33 3445799998532111112222 6799999999999999873111 13578889
Q ss_pred HhcCcEEEEEecc
Q 009946 339 KSMCWKIVSKKDQ 351 (522)
Q Consensus 339 ~~~g~~~v~~~~~ 351 (522)
..+||.+.+..+.
T Consensus 236 ~~aGF~V~k~~G~ 248 (308)
T 3vyw_A 236 LTLGFKVGSSREI 248 (308)
T ss_dssp HHTTCEEEEEECC
T ss_pred HHCCCEEEecCCC
Confidence 9999999876654
No 299
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.19 E-value=0.066 Score=54.15 Aligned_cols=94 Identities=15% Similarity=0.265 Sum_probs=59.3
Q ss_pred eEEEEeCCCC-CC-CCCCCceEEEecccc-------------ccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCCh--
Q 009946 263 STLGVLGTKR-LP-YPSRSFELAHCSRCR-------------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDP-- 325 (522)
Q Consensus 263 ~~~~~~d~~~-lp-f~d~sFDlVv~s~~~-------------l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~-- 325 (522)
..+..+|... +. +++++||+|++.--- .+|.......|.++.|+|+|||.+++.....+....
T Consensus 15 ~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~ 94 (323)
T 1boo_A 15 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPA 94 (323)
T ss_dssp EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEE
T ss_pred ceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcc
Confidence 4566666432 32 457889999985310 123334567899999999999999998754421100
Q ss_pred hHHHHHHHHHHHHHhcCcEEEEEecceEEEeccCC
Q 009946 326 ENRRIWNAMYDLLKSMCWKIVSKKDQTVIWAKPIS 360 (522)
Q Consensus 326 e~~~~~~~l~~l~~~~g~~~v~~~~~~~iw~Kp~~ 360 (522)
.....+..+.++++..||... ...+|+|+..
T Consensus 95 ~~~~~~~~i~~~~~~~Gf~~~----~~iiW~k~~~ 125 (323)
T 1boo_A 95 RSIYNFRVLIRMIDEVGFFLA----EDFYWFNPSK 125 (323)
T ss_dssp ECCHHHHHHHHHHHTTCCEEE----EEEEEECSSC
T ss_pred cccchHHHHHHHHHhCCCEEE----EEEEEecCCC
Confidence 011234556667889999776 3568988753
No 300
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=93.51 E-value=0.12 Score=51.57 Aligned_cols=68 Identities=12% Similarity=-0.069 Sum_probs=49.6
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC-CCeEEEEeCCCCCC-----CCCCCceEEEec
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLP-----YPSRSFELAHCS 286 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg-~~~~~~~~d~~~lp-----f~d~sFDlVv~s 286 (522)
...+||.+||.|..+..|+++ +..+.+.|.++.+++.|++.. .++.++..+..+++ ...++||.|++.
T Consensus 23 gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcCCCCcCEEEeC
Confidence 368999999999999999986 345666677888888877621 25778887776653 122568998863
No 301
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.47 E-value=0.081 Score=52.69 Aligned_cols=56 Identities=20% Similarity=0.007 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc
Q 009946 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER 259 (522)
Q Consensus 192 a~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r 259 (522)
.....+.+.+... .....|||++||+|.++..++.. +..+.+.|+++.+++.|+++
T Consensus 221 p~~l~~~~i~~~~---------~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 221 PLELAERLVRMFS---------FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKER 276 (297)
T ss_dssp CHHHHHHHHHHHC---------CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC---------CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHH
Confidence 3455555555543 22468999999999999888764 23444456666666766655
No 302
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=92.36 E-value=0.16 Score=50.90 Aligned_cols=91 Identities=10% Similarity=-0.023 Sum_probs=54.0
Q ss_pred CCCeEEEECC------CCchHHHH-HhhC--CCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEe
Q 009946 215 NIRNVLDVGC------GVASFGAY-LLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHC 285 (522)
Q Consensus 215 ~~~~VLDIGC------GtG~~a~~-La~~--~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~ 285 (522)
...+|||+|+ -.|++.+. +... .++++|+.+.... .+ .++++|...+.. .+.||+|++
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~sd-----------a~-~~IqGD~~~~~~-~~k~DLVIS 175 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSD-----------AD-STLIGDCATVHT-ANKWDLIIS 175 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBCS-----------SS-EEEESCGGGEEE-SSCEEEEEE
T ss_pred CCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcccccC-----------CC-eEEEcccccccc-CCCCCEEEe
Confidence 3578999996 56764322 2222 4556666654321 12 457777554433 377999997
Q ss_pred ccc----cccch-----hhh-HHHHHHHHHhCCCCeEEEEEeC
Q 009946 286 SRC----RIDWL-----QRD-GILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 286 s~~----~l~~~-----~d~-~~~L~ei~RvLkPGG~lvis~P 318 (522)
-.+ ..--. ... +.++.-+.++|+|||.|++-.-
T Consensus 176 DMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 176 DMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp CCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEe
Confidence 210 01001 112 4567777889999999999763
No 303
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=91.72 E-value=0.44 Score=48.52 Aligned_cols=128 Identities=13% Similarity=0.045 Sum_probs=74.4
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCC---CCCCceEEEeccccccc-
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY---PSRSFELAHCSRCRIDW- 292 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf---~d~sFDlVv~s~~~l~~- 292 (522)
.+|||+-||.|.++..+..+.+..-.+...|+.+.+++..+.+.....+...|+.++.. +...+|+|+.+.---.+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS 82 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT 82 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-----
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchh
Confidence 46999999999999988776321112455577778877777776555666778776642 11258999975310001
Q ss_pred -------hhhh-HHHHHHHHHh---CC--CCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 293 -------LQRD-GILLLELDRL---LR--PGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 293 -------~~d~-~~~L~ei~Rv---Lk--PGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
..|. ..++.++.|+ ++ |.-.++=-++... ....++.+.+.++++||.+....
T Consensus 83 ~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~-----~~~~~~~i~~~l~~~GY~v~~~v 147 (343)
T 1g55_A 83 RIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFE-----VSSTRDLLIQTIENCGFQYQEFL 147 (343)
T ss_dssp -------------CHHHHHHHHGGGCSSCCSEEEEEEETTGG-----GSHHHHHHHHHHHHTTEEEEEEE
T ss_pred hcCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCcccc-----CHHHHHHHHHHHHHCCCeeEEEE
Confidence 1121 1245544444 45 6533331123221 12456778888899999876543
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=90.62 E-value=0.3 Score=47.54 Aligned_cols=51 Identities=12% Similarity=-0.016 Sum_probs=36.2
Q ss_pred hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecceEEEeccC
Q 009946 296 DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQTVIWAKPI 359 (522)
Q Consensus 296 ~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~~~~iw~Kp~ 359 (522)
....|.++.|+|+|||.+++...+ .....+..++.+.||.... ..+|+|+.
T Consensus 53 ~~~~l~~~~~~Lk~~g~i~v~~~d---------~~~~~~~~~~~~~gf~~~~----~iiW~K~~ 103 (260)
T 1g60_A 53 TYRWIDKVLDKLDKDGSLYIFNTP---------FNCAFICQYLVSKGMIFQN----WITWDKRD 103 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECH---------HHHHHHHHHHHHTTCEEEE----EEEECCCC
T ss_pred HHHHHHHHHHHhcCCeEEEEEcCc---------HHHHHHHHHHHhhccceeE----EEEEEecC
Confidence 456889999999999999986411 0123455567788997653 56899874
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=90.30 E-value=2.7 Score=43.32 Aligned_cols=124 Identities=15% Similarity=0.031 Sum_probs=75.0
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCC--------CCCCceEEEeccc
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY--------PSRSFELAHCSRC 288 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf--------~d~sFDlVv~s~~ 288 (522)
.++||+-||.|.++..+..+... -+...|+.+...+..+.......+...|+.++.. ....+|+|+.+.-
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~--~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFD--VKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCE--EEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCc--EEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 46999999999999888776321 1235577777777766665566777788776641 2357999996421
Q ss_pred cccc-------hhhh-HHHHH---HHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEE
Q 009946 289 RIDW-------LQRD-GILLL---ELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (522)
Q Consensus 289 ~l~~-------~~d~-~~~L~---ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~ 345 (522)
--.+ ..|. ..++. ++.+.++|.-.++=-++.... ......++.+. .++++||.+
T Consensus 81 CQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s--~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 81 CQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQ--EKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp CCTTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTTC--GGGHHHHHHHH-HHHHTTEEE
T ss_pred CCCcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecchHhhc--cCcHHHHHHHH-HHHcCCCcc
Confidence 0001 1122 22333 444556885444433344322 23344677777 889999987
No 306
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.99 E-value=0.93 Score=45.70 Aligned_cols=79 Identities=19% Similarity=0.341 Sum_probs=48.7
Q ss_pred CCCCceEEEeccc----------cccchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcC-cE
Q 009946 276 PSRSFELAHCSRC----------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC-WK 344 (522)
Q Consensus 276 ~d~sFDlVv~s~~----------~l~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g-~~ 344 (522)
++++||+|++.-- .-.|.......|.++.|+|+|||.+++..........+. .....+...+...| |.
T Consensus 55 ~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~-~~l~~l~~~i~~~G~~~ 133 (319)
T 1eg2_A 55 PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGS-GDLISIISHMRQNSKML 133 (319)
T ss_dssp CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTB-CCHHHHHHHHHHHCCCE
T ss_pred ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCccccccccc-ccHHHHHHHHhCcccce
Confidence 4678999987431 011333446788899999999999999775432211000 11234455566667 88
Q ss_pred EEEEecceEEEeccC
Q 009946 345 IVSKKDQTVIWAKPI 359 (522)
Q Consensus 345 ~v~~~~~~~iw~Kp~ 359 (522)
... ..+|+|+.
T Consensus 134 ~~~----~IIW~K~~ 144 (319)
T 1eg2_A 134 LAN----LIIWNYPN 144 (319)
T ss_dssp EEE----EEEEECSC
T ss_pred eEE----EEEEECCC
Confidence 774 45898875
No 307
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=86.62 E-value=0.98 Score=50.07 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=40.8
Q ss_pred CCCceEEEeccccccchhhh--HHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 277 SRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 277 d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
+..||+++.-...-...++. ..++..+.++++|||.+.-..-. ..+++.+.++||.+....
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~------------~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA------------GFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC------------HHHHHHHHHTTCEEEEEE
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc------------HHHHHHHHhCCeEEEecc
Confidence 46799998533111111222 67999999999999997742211 357788899999887654
No 308
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=86.29 E-value=0.68 Score=47.07 Aligned_cols=93 Identities=13% Similarity=0.070 Sum_probs=59.3
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCCCCC-----CCCCCCceEEEecc
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRL-----PYPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~~~l-----pf~d~sFDlVv~s~ 287 (522)
...+||-+|+|. |.++..++.. .+. .+...+.++...+.+++.|....+.. ...++ ....+.||+|+-..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~-~~~~~~~~~~~~~~gg~D~vid~~ 266 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKV--CGASIIIAVDIVESRLELAKQLGATHVINS-KTQDPVAAIKEITDGGVNFALEST 266 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHH--HTCSEEEEEESCHHHHHHHHHHTCSEEEET-TTSCHHHHHHHHTTSCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEECCCHHHHHHHHHcCCCEEecC-CccCHHHHHHHhcCCCCcEEEECC
Confidence 457899999875 6777777654 133 34445667788888888876433321 11111 01123699998443
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ....+.+..++|++||++++..
T Consensus 267 g-------~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 267 G-------SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp C-------CHHHHHHHHHTEEEEEEEEECC
T ss_pred C-------CHHHHHHHHHHHhcCCEEEEeC
Confidence 1 1246888999999999999865
No 309
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=86.10 E-value=1.8 Score=47.63 Aligned_cols=61 Identities=15% Similarity=0.130 Sum_probs=41.0
Q ss_pred CCCceEEEeccccccchhhh--HHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEe
Q 009946 277 SRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (522)
Q Consensus 277 d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~ 349 (522)
+..||+++.-...-.-.++. ..++..+.++++|||.+.-..-. ..+++.+.+.||.+....
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~------------~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA------------GFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC------------HHHHHHHHHHTCEEEEEE
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc------------HHHHHHHHhCCeEEEecc
Confidence 36799998533111111222 67999999999999998742211 357788889999887644
No 310
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=85.55 E-value=1 Score=45.41 Aligned_cols=94 Identities=15% Similarity=0.087 Sum_probs=59.1
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeC--CCC----CC-CCCCCceEEEe
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLG--TKR----LP-YPSRSFELAHC 285 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d--~~~----lp-f~d~sFDlVv~ 285 (522)
...+||-+|+|. |.++..++.. .+. .+...+.++...+.+++.|....+.... ..+ +. ...+.||+|+-
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid 248 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKA--MGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIE 248 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEE
Confidence 347899999874 6777777654 233 4555567788888888887653332110 000 00 00146999984
Q ss_pred ccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
... ....+....++|+|||++++..
T Consensus 249 ~~g-------~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 249 CTG-------AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp CSC-------CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCC-------ChHHHHHHHHHhcCCCEEEEEe
Confidence 331 1246788899999999999865
No 311
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=85.45 E-value=2.5 Score=42.74 Aligned_cols=129 Identities=14% Similarity=0.137 Sum_probs=74.6
Q ss_pred CCeEEEECCCCchHHHHHhhCCCccccc-CcccccHHHHHHHHHcCCCeEEEEeCCCCCCC---CCCCceEEEecccccc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSL-APNDVHENQIQFALERGIPSTLGVLGTKRLPY---PSRSFELAHCSRCRID 291 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdi-s~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf---~d~sFDlVv~s~~~l~ 291 (522)
.-+++|+-||.|.+...+....+..--+ ...|+.+.+.+.-+.+.... +...|+.++.. +...+|+++.+.---.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~ 88 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMSPPCQP 88 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEECCCCTT
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEecCCccC
Confidence 3579999999999998888764211112 35567776666555443222 45567766642 2235899986431111
Q ss_pred c----------hhhh-HHHHHHHHH-hC-----CCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 292 W----------LQRD-GILLLELDR-LL-----RPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 292 ~----------~~d~-~~~L~ei~R-vL-----kPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+ ..|. ..++.++.| ++ +|. ++++---.... ....++.+.+.++++||.+....-
T Consensus 89 fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~-~~~lENV~gl~----~~~~~~~i~~~l~~~GY~v~~~vl 159 (327)
T 3qv2_A 89 YNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK-HIFIENVPLFK----ESLVFKEIYNILIKNQYYIKDIIC 159 (327)
T ss_dssp CSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS-EEEEEECGGGG----GSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccCCCCCCCccccchhHHHHHHHHHHHhccCCC-EEEEEchhhhc----ChHHHHHHHHHHHhCCCEEEEEEE
Confidence 2 1233 356777777 55 454 33332221111 124577888889999998765543
No 312
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=85.34 E-value=1.1 Score=45.94 Aligned_cols=98 Identities=12% Similarity=0.055 Sum_probs=60.4
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCCCCC-C------CCCCCceEEEe
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRL-P------YPSRSFELAHC 285 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~~~l-p------f~d~sFDlVv~ 285 (522)
...+||-+|+|. |.++..++.. .+. .+...+.++..++.+++.|. ........++ . .....||+|+-
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa--~~i~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARL--LGAACVIVGDQNPERLKLLSDAGF--ETIDLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--HTCSEEEEEESCHHHHHHHHTTTC--EEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCHHHHHHHHHcCC--cEEcCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 457899999975 7777777764 233 45555777788888887765 2322211221 0 01236999985
Q ss_pred ccccccc--------hhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 286 SRCRIDW--------LQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 286 s~~~l~~--------~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
... ... ..+....+.++.++|++||++++..
T Consensus 261 ~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 261 AVG-FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp CSC-TTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCC-CccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 432 111 0012347889999999999998754
No 313
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=84.93 E-value=0.84 Score=45.92 Aligned_cols=89 Identities=16% Similarity=0.100 Sum_probs=58.1
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccch
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~ 293 (522)
...+||-+|+|. |.++..++.. .+..+...+.++...+.+++.|....+ .+...+ . +.+|+|+-... ..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~v~--~~~~~~--~-~~~D~vid~~g-~~-- 245 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVA--MGAEVSVFARNEHKKQDALSMGVKHFY--TDPKQC--K-EELDFIISTIP-TH-- 245 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHH--TTCEEEEECSSSTTHHHHHHTTCSEEE--SSGGGC--C-SCEEEEEECCC-SC--
T ss_pred CCCEEEEECCcHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHhcCCCeec--CCHHHH--h-cCCCEEEECCC-cH--
Confidence 457899999864 6667777654 233455556666667788887765544 333222 2 27999984331 11
Q ss_pred hhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 294 QRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
..+....++|+|||++++..
T Consensus 246 ----~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 246 ----YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp ----CCHHHHHTTEEEEEEEEECC
T ss_pred ----HHHHHHHHHHhcCCEEEEEC
Confidence 25778889999999999865
No 314
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=84.22 E-value=7.6 Score=38.82 Aligned_cols=100 Identities=15% Similarity=0.150 Sum_probs=59.7
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc--------CCCeEEEEeCCCCCCCC----CCCc---
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER--------GIPSTLGVLGTKRLPYP----SRSF--- 280 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r--------g~~~~~~~~d~~~lpf~----d~sF--- 280 (522)
++.|+++|||-=..+..+.... ++.+...|. +..++..++. ..+..++.+|+.+ ... ...|
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~--~~~v~evD~-P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPT--GTTVYEIDQ-PKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCT--TCEEEEEEC-HHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CCeEEEeCCCCCchhhhccCCC--CcEEEEcCC-HHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 3679999999888877776221 123333342 3333332221 1234566667654 210 1112
Q ss_pred -eEEEeccccccchhhh--HHHHHHHHHhCCCCeEEEEEeCC
Q 009946 281 -ELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 281 -DlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
=.++...++++|+++. ..+++.+...+.||+++++....
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 2444566688888654 56899999999999999987643
No 315
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=84.11 E-value=1.1 Score=46.06 Aligned_cols=99 Identities=14% Similarity=0.048 Sum_probs=61.5
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCCCC-CC------CCCCCceEEEe
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKR-LP------YPSRSFELAHC 285 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~~~-lp------f~d~sFDlVv~ 285 (522)
...+||-+|+|. |.++..++... +. .+...+.++..++.+++.|.. .+.....+ +. .....+|+|+-
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~--Ga~~Vi~~~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~v~~~t~g~g~Dvvid 260 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLL--GAAVVIVGDLNPARLAHAKAQGFE--IADLSLDTPLHEQIAALLGEPEVDCAVD 260 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHcCCc--EEccCCcchHHHHHHHHhCCCCCCEEEE
Confidence 457899999864 67777777641 33 345557778888899888763 22211111 00 01236999985
Q ss_pred ccccc--------cchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 286 SRCRI--------DWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 286 s~~~l--------~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
....- .+.+++...+.+..++|++||++++..
T Consensus 261 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 261 AVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp CCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 43211 122334457899999999999998765
No 316
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=83.96 E-value=3.2 Score=42.03 Aligned_cols=100 Identities=14% Similarity=0.189 Sum_probs=58.0
Q ss_pred CCeEEEECCCCchHHHHHhh--CCCcccccCcccccHHHHHHHHHc----------------------CCCeEEEEeCCC
Q 009946 216 IRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALER----------------------GIPSTLGVLGTK 271 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~--~~v~gvdis~~Dis~a~i~~A~~r----------------------g~~~~~~~~d~~ 271 (522)
...|+.+|||..+....|.. .++.-++++-.++-+...+...+. ..+..++-+|+.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL~ 177 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLN 177 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCTT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCCC
Confidence 36799999999999988875 333333333222211111222221 134566767765
Q ss_pred CCC--------C-CCCCceEEEeccccccchhhh--HHHHHHHHHhCCCCeEEEEEe
Q 009946 272 RLP--------Y-PSRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 272 ~lp--------f-~d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvis~ 317 (522)
+.. . ..+...+++ +.+++.|++.. ..+|..+.+.+ |+|.+++.+
T Consensus 178 d~~w~~~ll~~~~d~~~Ptl~i-aEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e 232 (334)
T 1rjd_A 178 DITETTRLLDVCTKREIPTIVI-SECLLCYMHNNESQLLINTIMSKF-SHGLWISYD 232 (334)
T ss_dssp CHHHHHHHHHTTCCTTSCEEEE-EESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEE
T ss_pred CcHHHHHHHHhcCCCCCCEEEE-EcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEe
Confidence 521 1 223455665 55578887554 56888888877 788776544
No 317
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=83.95 E-value=2.4 Score=42.58 Aligned_cols=94 Identities=14% Similarity=0.038 Sum_probs=58.9
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CC---CCCceEEE
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YP---SRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~---d~sFDlVv 284 (522)
...+||-+|+|. |.++..++.. .+..+...+.++...+.+++.|....+...+..++. .. .+.+|+|+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vi 245 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKA--YGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTI 245 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEE
Confidence 347899999863 5666666654 233455556778888888887765333211101111 01 24699998
Q ss_pred eccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
-... ....+....++|++||++++..
T Consensus 246 d~~g-------~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 246 DCSG-------NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp ECSC-------CHHHHHHHHHHSCTTCEEEECS
T ss_pred ECCC-------CHHHHHHHHHHHhcCCEEEEEe
Confidence 4431 1236788899999999999865
No 318
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=83.79 E-value=1.4 Score=42.72 Aligned_cols=41 Identities=15% Similarity=-0.016 Sum_probs=28.9
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER 259 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r 259 (522)
...|||..||+|+++...... +-.+.+.|+++..++.|+++
T Consensus 213 ~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r 253 (260)
T 1g60_A 213 NDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFV 253 (260)
T ss_dssp TCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHH
Confidence 468999999999988777654 22334446666777777665
No 319
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=81.51 E-value=1 Score=41.10 Aligned_cols=90 Identities=14% Similarity=0.149 Sum_probs=52.9
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC--------CCCCCceEEE
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp--------f~d~sFDlVv 284 (522)
..++||.+|+ |.|..+..++.. .+..+...+.++...+.+++.+....+ |..+.. ...+.+|+|+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~--~G~~V~~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKM--IGARIYTTAGSDAKREMLSRLGVEYVG---DSRSVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHTTCCSEEE---ETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHcCCCEEe---eCCcHHHHHHHHHHhCCCCCeEEE
Confidence 4578999995 445555555432 123444445566666666655543222 221111 1123699998
Q ss_pred eccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.+.. ...+.++.++|+|||++++..
T Consensus 113 ~~~g--------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 113 NSLA--------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp ECCC--------THHHHHHHHTEEEEEEEEECS
T ss_pred ECCc--------hHHHHHHHHHhccCCEEEEEc
Confidence 5431 146788999999999999754
No 320
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=81.15 E-value=4.3 Score=41.15 Aligned_cols=94 Identities=15% Similarity=0.102 Sum_probs=59.8
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCCCCC--------CCCCCCceEEE
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRL--------PYPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~~~l--------pf~d~sFDlVv 284 (522)
...+||=+|+|. |.++..++.. .+. .+...+.++...+.+++.|....+... ..++ ....+.||+|+
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~-~~~~~~~i~~~~~~~~gg~Dvvi 258 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARL--AGATTVILSTRQATKRRLAEEVGATATVDPS-AGDVVEAIAGPVGLVPGGVDVVI 258 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCHHHHHHHHHHTCSEEECTT-SSCHHHHHHSTTSSSTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHcCCCEEECCC-CcCHHHHHHhhhhccCCCCCEEE
Confidence 347899999864 5666666654 233 455556778888888888765433211 1110 01224799998
Q ss_pred eccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
-... ....+..+.++|++||++++...
T Consensus 259 d~~G-------~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 259 ECAG-------VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp ECSC-------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred ECCC-------CHHHHHHHHHHhccCCEEEEEec
Confidence 4321 13578899999999999998653
No 321
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=80.87 E-value=2 Score=43.16 Aligned_cols=93 Identities=11% Similarity=0.088 Sum_probs=59.2
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CCCCCceEEEec
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~d~sFDlVv~s 286 (522)
...+||=+|+|. |.++..++.. .+. .+...+.++..++.+++.|....+... ..++. .....||+|+-.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~--~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-~~~~~~~v~~~t~g~g~D~v~d~ 242 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANH--LGAGRIFAVGSRKHCCDIALEYGATDIINYK-NGDIVEQILKATDGKGVDKVVIA 242 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHT--TTCSSEEEECCCHHHHHHHHHHTCCEEECGG-GSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCcEEEEECCCHHHHHHHHHhCCceEEcCC-CcCHHHHHHHHcCCCCCCEEEEC
Confidence 346799999864 6667777664 233 455567778888888888865333211 11110 122369999843
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.. . ...+.++.++|+|||++++..
T Consensus 243 ~g-~------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 243 GG-D------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp SS-C------TTHHHHHHHHEEEEEEEEECC
T ss_pred CC-C------hHHHHHHHHHHhcCCEEEEec
Confidence 31 1 136888999999999999764
No 322
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=80.79 E-value=5.6 Score=40.20 Aligned_cols=128 Identities=13% Similarity=0.008 Sum_probs=74.1
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCC---CCCCceEEEeccc-----
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY---PSRSFELAHCSRC----- 288 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf---~d~sFDlVv~s~~----- 288 (522)
-+++|+-||.|.+...+....+..--+...|+.+...+.-+.+.....+...|+.++.. +...+|+++.+.-
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 46999999999999888765331112345567777766666655555566677766642 2235899986321
Q ss_pred cc---cchhhh-HHHHHHHHHhC---C-CCeEEEEEe-CCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 289 RI---DWLQRD-GILLLELDRLL---R-PGGYFVYSS-PEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 289 ~l---~~~~d~-~~~L~ei~RvL---k-PGG~lvis~-P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
.. ....|. ..++.++.|++ + |. +|++-. +... ....++.+.+.++++||.+....-
T Consensus 84 ~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~-~~vlENV~gl~-----~~~~~~~i~~~l~~~GY~v~~~vl 148 (333)
T 4h0n_A 84 RNGKYLDDNDPRTNSFLYLIGILDQLDNVD-YILMENVKGFE-----NSTVRNLFIDKLKECNFIYQEFLL 148 (333)
T ss_dssp ETTEECCTTCTTSCCHHHHHHHGGGCTTCC-EEEEEECTTGG-----GSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred hhhhccCCcCcccccHHHHHHHHHHhcCCC-EEEEecchhhh-----hhhHHHHHHHHHHhCCCeEEEEEe
Confidence 00 011222 13455555554 4 64 333322 2221 123477888889999998866543
No 323
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=80.66 E-value=1.2 Score=39.41 Aligned_cols=72 Identities=17% Similarity=0.198 Sum_probs=44.3
Q ss_pred CCCCCCCceEEEeccccc-cchhhhHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEecc
Q 009946 273 LPYPSRSFELAHCSRCRI-DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (522)
Q Consensus 273 lpf~d~sFDlVv~s~~~l-~~~~d~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~~ 351 (522)
..+++++||.|+.....- .+..-+..++..+.+.|||||.|.. . .. -...+. --+||.+....+.
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g-l-------~~----~~~~Ea--ilaGfvv~~~~~~ 118 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG-L-------SD----IYKVDA--LINGFEIINEPDY 118 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC-C-------CH----HHHHHH--HHHTEEEECSSSC
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe-c-------Cc----chhhHH--HhhccEeccCCCc
Confidence 346788999999543211 2222237899999999999999986 1 11 112333 3458887753222
Q ss_pred eEEEeccCC
Q 009946 352 TVIWAKPIS 360 (522)
Q Consensus 352 ~~iw~Kp~~ 360 (522)
.|.||..
T Consensus 119 --~~~KP~~ 125 (136)
T 2km1_A 119 --CWIKMDS 125 (136)
T ss_dssp --EEEEC--
T ss_pred --eeeccCc
Confidence 7999853
No 324
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=80.60 E-value=1.8 Score=43.07 Aligned_cols=93 Identities=11% Similarity=0.091 Sum_probs=55.4
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC-----CCCCCceEEEecc
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp-----f~d~sFDlVv~s~ 287 (522)
..++||-+|+ |.|..+..++... +..+...+.++...+.+++.+....+...+..++. ...+.+|+++.+.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 222 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNV 222 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 4578999998 4556665555431 33455556666777777666653322211101110 0114699998554
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ...+.+..++|++||++++..
T Consensus 223 g--------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 223 G--------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp C--------HHHHHHHHTTEEEEEEEEECC
T ss_pred C--------hHHHHHHHHHHhcCCEEEEEe
Confidence 2 124788889999999998765
No 325
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=79.53 E-value=1.1 Score=44.74 Aligned_cols=91 Identities=11% Similarity=0.095 Sum_probs=60.9
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCC------CCCCceEEEecc
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY------PSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf------~d~sFDlVv~s~ 287 (522)
...+||-+|+|. |.++..++... +..+...+.++...+.+++.|....+. ..+..+ ..+.+|.|+-..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~~i~---~~~~~~~~~~~~~~g~~d~vid~~ 240 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARRLGAEVAVN---ARDTDPAAWLQKEIGGAHGVLVTA 240 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSEEEE---TTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCEEEe---CCCcCHHHHHHHhCCCCCEEEEeC
Confidence 457899999874 78888887652 446666677888888898887654332 211111 013588887332
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ....+..+.++|++||++++..
T Consensus 241 g-------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 241 V-------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp C-------CHHHHHHHHHHEEEEEEEEECS
T ss_pred C-------CHHHHHHHHHHhccCCEEEEeC
Confidence 1 1357888999999999999865
No 326
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=79.22 E-value=6.9 Score=39.37 Aligned_cols=127 Identities=9% Similarity=0.037 Sum_probs=69.3
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCC-CCCceEEEecc-----cc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-SRSFELAHCSR-----CR 289 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~-d~sFDlVv~s~-----~~ 289 (522)
..++||+.||.|.++..+..+.... +...|+.+..++..+....... ..|+.++... -..+|+|+.+. +.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~--v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ 86 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAEC--VYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSI 86 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEE--EEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeE--EEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcch
Confidence 4689999999999999887763221 2344666666665555422222 4665554311 12489999742 10
Q ss_pred c---cchhhhH-HHHH---HHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEE
Q 009946 290 I---DWLQRDG-ILLL---ELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (522)
Q Consensus 290 l---~~~~d~~-~~L~---ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~ 348 (522)
. .-..|.. .++. ++.+.++|.-.++=-++.... ......++.+...++++||.+...
T Consensus 87 ag~~~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV~gl~~--~~~~~~~~~i~~~l~~~GY~v~~~ 150 (327)
T 2c7p_A 87 SGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFAS--HDNGNTLEVVKNTMNELDYSFHAK 150 (327)
T ss_dssp TSCCCGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGGGGT--GGGGHHHHHHHHHHHHTTBCCEEE
T ss_pred hcccCCCcchhhHHHHHHHHHHHhccCcEEEEeCcHHHHh--ccccHHHHHHHHHHHhCCCEEEEE
Confidence 0 0112221 2333 344456886333322233221 122345778888889999876544
No 327
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.08 E-value=0.99 Score=46.03 Aligned_cols=91 Identities=16% Similarity=0.122 Sum_probs=55.8
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeC---CCCCCCCCCCceEEEeccccc
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLG---TKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d---~~~lpf~d~sFDlVv~s~~~l 290 (522)
...+||-+|+|. |.++..++... +..+...+.++...+.+++.|....+...+ ...+. +.+|+|+-... .
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~~g-~ 267 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFILNTVA-A 267 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEECCS-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEEEECCC-C
Confidence 357899999873 66677776542 334444455666667777777543332111 11121 46999985432 1
Q ss_pred cchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 291 DWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
...+.+..++|++||++++..
T Consensus 268 ------~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 268 ------PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp ------CCCHHHHHTTEEEEEEEEECC
T ss_pred ------HHHHHHHHHHhccCCEEEEec
Confidence 124677889999999998765
No 328
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=78.01 E-value=2.1 Score=43.30 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=59.4
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CCCCCceEEEecc
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~d~sFDlVv~s~ 287 (522)
...+||=+|+|. |.++..++.. .+..+...+.++...+.+++.|....+. .+..++. .....+|+|+-..
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~~~g~g~D~vid~~ 265 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKA--TGAEVIVTSSSREKLDRAFALGADHGIN-RLEEDWVERVYALTGDRGADHILEIA 265 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHHTTCCEEEEEEET
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEecCchhHHHHHHcCCCEEEc-CCcccHHHHHHHHhCCCCceEEEECC
Confidence 457899999764 5666666654 2445666677778888888887754433 2111111 1223699998443
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ...+....++|+|||.+++..
T Consensus 266 g--------~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 266 G--------GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp T--------SSCHHHHHHHEEEEEEEEEEC
T ss_pred C--------hHHHHHHHHHhhcCCEEEEEe
Confidence 1 125777889999999999875
No 329
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=77.59 E-value=1.8 Score=44.40 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=43.0
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhC----CCcccccCcccccHHHHHHHHHc--CCCeEEEE
Q 009946 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER--GIPSTLGV 267 (522)
Q Consensus 194 ~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~----~v~gvdis~~Dis~a~i~~A~~r--g~~~~~~~ 267 (522)
...+.|.+.+.+... .. ......|||||.|.|.++..|+++ .+++++++. ..+...++. ..++.++.
T Consensus 39 ~i~~~Iv~~~~l~~~-~~-~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~-----~l~~~L~~~~~~~~l~ii~ 111 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKT-YK-HPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRS-----SLYKFLNAKFEGSPLQILK 111 (353)
T ss_dssp HHHHHHHHHHCGGGT-CC-CTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCH-----HHHHHHHHHTTTSSCEEEC
T ss_pred HHHHHHHHhccCCcc-cC-cCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCH-----HHHHHHHHhccCCCEEEEE
Confidence 455666666653210 00 013468999999999999999853 566776554 343433332 34566776
Q ss_pred eCCCC
Q 009946 268 LGTKR 272 (522)
Q Consensus 268 ~d~~~ 272 (522)
+|+..
T Consensus 112 ~D~l~ 116 (353)
T 1i4w_A 112 RDPYD 116 (353)
T ss_dssp SCTTC
T ss_pred CCccc
Confidence 66633
No 330
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=77.19 E-value=19 Score=36.68 Aligned_cols=94 Identities=12% Similarity=0.026 Sum_probs=57.8
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccH-HHHHHHHHcCCC---eEEEEeCCCCCCCCCCCceEEEeccccccc
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHE-NQIQFALERGIP---STLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~-a~i~~A~~rg~~---~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~ 292 (522)
.+||.|+.+.|.++..|+...++.++ ..-+++ +.....+..+.. +.+. ...+.+ ...||+|+... -..
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~~~~~~--ds~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~---~~~~~~v~~~l--pk~ 111 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHKPYSIG--DSYISELATRENLRLNGIDESSVKFL-DSTADY---PQQPGVVLIKV--PKT 111 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGCCEEEE--SCHHHHHHHHHHHHHTTCCGGGSEEE-ETTSCC---CSSCSEEEEEC--CSC
T ss_pred CCEEEECCCCCHHHHhhccCCceEEE--hHHHHHHHHHHHHHHcCCCccceEec-cccccc---ccCCCEEEEEc--CCC
Confidence 46999999999999999876665542 111222 222223333443 3332 122322 25799988432 233
Q ss_pred hhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 293 LQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
.......|..+...|+||+.+++...
T Consensus 112 ~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 112 LALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp HHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 34446688999999999999987764
No 331
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=75.49 E-value=5.5 Score=39.73 Aligned_cols=91 Identities=13% Similarity=0.118 Sum_probs=58.1
Q ss_pred CCCeEEEECCC-CchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCC------CCceEEEecc
Q 009946 215 NIRNVLDVGCG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS------RSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIGCG-tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d------~sFDlVv~s~ 287 (522)
...+||-+|+| .|.++..++... +..+...+.++...+.+++.|.... .+..+..+.+ +.+|+|+-..
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~~---~d~~~~~~~~~~~~~~~~~d~vid~~ 238 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKELGADLV---VNPLKEDAAKFMKEKVGGVHAAVVTA 238 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSEE---ECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHCCCCEE---ecCCCccHHHHHHHHhCCCCEEEECC
Confidence 34789999985 466666666542 4456666777888888887765422 2322111100 3689998443
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ....+....++|++||++++..
T Consensus 239 g-------~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 239 V-------SKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp C-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred C-------CHHHHHHHHHHhhcCCEEEEec
Confidence 1 1246788899999999998765
No 332
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=75.26 E-value=1.6 Score=43.71 Aligned_cols=94 Identities=17% Similarity=0.140 Sum_probs=58.5
Q ss_pred CCeEEEECCCC-chHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeC----CCCCCCCCCCceEEEeccccc
Q 009946 216 IRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLG----TKRLPYPSRSFELAHCSRCRI 290 (522)
Q Consensus 216 ~~~VLDIGCGt-G~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d----~~~lpf~d~sFDlVv~s~~~l 290 (522)
..+||-+|+|. |.++..++.....+..+...+.++...+.+++.|....+...+ ...+. ....+|+|+-...
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid~~g-- 247 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAIDLVG-- 247 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEESSC--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEECCC--
Confidence 46899999863 5666666654200345666677788888888877543321111 01111 1236999984431
Q ss_pred cchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 291 DWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
....+..+.++|++||++++..
T Consensus 248 -----~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 248 -----TEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp -----CHHHHHHHHHHEEEEEEEEECC
T ss_pred -----ChHHHHHHHHHhhcCCEEEEeC
Confidence 1246888899999999998765
No 333
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=74.61 E-value=9.3 Score=37.28 Aligned_cols=54 Identities=17% Similarity=0.180 Sum_probs=37.5
Q ss_pred CCeEEEEeCCC-CCC-----CCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 261 IPSTLGVLGTK-RLP-----YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 261 ~~~~~~~~d~~-~lp-----f~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.++.+..+++. .+| .+..+||+|+.-.. .-......+..+...|+|||.+++.+
T Consensus 158 ~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D---~Y~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 158 QRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD---LYEPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp CSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC---CHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc---ccchHHHHHHHHHHHhCCCcEEEEcC
Confidence 35788888743 333 24567999995432 22334568889999999999999866
No 334
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=73.86 E-value=3.2 Score=41.34 Aligned_cols=93 Identities=9% Similarity=0.030 Sum_probs=56.3
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHH-HcCCCeEEEEeCCCCCC-----CCCCCceEEEec
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFAL-ERGIPSTLGVLGTKRLP-----YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~-~rg~~~~~~~~d~~~lp-----f~d~sFDlVv~s 286 (522)
...+||-+|+ |.|..+..++... +..+...+.++...+.++ +.|....+...+..++. ...+.+|+|+.+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFEN 232 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence 4578999997 4666666666532 335555566777777776 45553322111111110 012469999854
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.. ...+....++|++||++++..
T Consensus 233 ~g--------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 233 VG--------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp SC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred CC--------HHHHHHHHHHHhcCCEEEEEc
Confidence 32 136888899999999998754
No 335
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=73.85 E-value=9.5 Score=38.22 Aligned_cols=94 Identities=14% Similarity=0.036 Sum_probs=57.2
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCcccc-cCcccccHHHHHHHHHcCCCeEEEEeCC---CCCC------CCCCCceEE
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMS-LAPNDVHENQIQFALERGIPSTLGVLGT---KRLP------YPSRSFELA 283 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gvd-is~~Dis~a~i~~A~~rg~~~~~~~~d~---~~lp------f~d~sFDlV 283 (522)
...+||=+|+|. |.++..++.. .+.. +...+.++...+.+++.+..+.....+. .++. .....+|+|
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKA--AGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH--TTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 346799999864 6666777654 2333 4445667778888887733332222211 0000 123469999
Q ss_pred EeccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
+-... ....+..+.++|++||++++..
T Consensus 257 id~~g-------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 257 LECTG-------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp EECSC-------CHHHHHHHHHHSCTTCEEEECC
T ss_pred EECCC-------ChHHHHHHHHHhcCCCEEEEEc
Confidence 84331 1246888999999999999865
No 336
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=73.72 E-value=3.5 Score=41.68 Aligned_cols=94 Identities=9% Similarity=-0.004 Sum_probs=56.3
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCC-CCCC-----CCCCCceEEEec
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGT-KRLP-----YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~-~~lp-----f~d~sFDlVv~s 286 (522)
...+||-+|+|. |.++..++.. .+. .+...+.++...+.+++.|....+...+. .++. ...+.+|+|+-.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~--~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 269 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHS--AGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEEC
Confidence 457899999863 5666666654 133 34444556666778887776433211110 1110 011369999843
Q ss_pred cccccchhhhHHHHHHHHHhCCCC-eEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPG-GYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPG-G~lvis~ 317 (522)
.. ....+....++|++| |++++..
T Consensus 270 ~g-------~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 270 VG-------NVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp SC-------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CC-------CHHHHHHHHHHhhcCCcEEEEEc
Confidence 31 124688899999999 9999765
No 337
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=73.37 E-value=4.4 Score=40.26 Aligned_cols=98 Identities=13% Similarity=0.071 Sum_probs=60.9
Q ss_pred eEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc---CCCeEEEEeCCCC-C---CCCCCCceEEEeccccc
Q 009946 218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---GIPSTLGVLGTKR-L---PYPSRSFELAHCSRCRI 290 (522)
Q Consensus 218 ~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r---g~~~~~~~~d~~~-l---pf~d~sFDlVv~s~~~l 290 (522)
.+||+=+|+|.++..+++. +-.+.-.|.+....+..++. ..++.+...|... + .-+...||+|++--. .
T Consensus 94 ~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP-Y 169 (283)
T 2oo3_A 94 STLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS-Y 169 (283)
T ss_dssp SSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC-C
T ss_pred CceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC-C
Confidence 4899999999999998875 22344446666665555544 2356777777322 2 123356999996432 2
Q ss_pred cchhhhHHHHHHHHH--hCCCCeEEEEEeCC
Q 009946 291 DWLQRDGILLLELDR--LLRPGGYFVYSSPE 319 (522)
Q Consensus 291 ~~~~d~~~~L~ei~R--vLkPGG~lvis~P~ 319 (522)
+...+...++..+.+ .+.|+|.+++=-|-
T Consensus 170 e~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 170 ERKEEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp CSTTHHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCCcHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 212344556666655 56799999985543
No 338
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=73.34 E-value=4.5 Score=40.93 Aligned_cols=94 Identities=10% Similarity=-0.017 Sum_probs=55.9
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCC-CCCC-----CCCCCceEEEec
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGT-KRLP-----YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~-~~lp-----f~d~sFDlVv~s 286 (522)
...+||-+|+|. |.++..++... +. .+...+.++...+.+++.|....+...+. .++. ...+.+|+|+-.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 268 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEEC
Confidence 457899999863 56666666541 33 34444556666677877776433221110 1110 112369999843
Q ss_pred cccccchhhhHHHHHHHHHhCCCC-eEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPG-GYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPG-G~lvis~ 317 (522)
.. ....+....++|++| |++++..
T Consensus 269 ~g-------~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 269 IG-------RLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SC-------CHHHHHHHHHHBCTTTCEEEECS
T ss_pred CC-------CHHHHHHHHHHhhcCCcEEEEec
Confidence 31 124678889999999 9998765
No 339
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=73.25 E-value=1.8 Score=43.49 Aligned_cols=94 Identities=13% Similarity=0.009 Sum_probs=54.5
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC-----CCCCCceEEEecc
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp-----f~d~sFDlVv~s~ 287 (522)
..++||-+|+ |.|..+..++... +..+...+.++...+.+++.+....+...+..++. ...+.+|+|+.+.
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 246 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVS 246 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence 3578999998 4566666665431 23444444455555667766654322111111110 0012699998543
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ....+..+.+.|++||++++..
T Consensus 247 g-------~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 247 V-------SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp S-------CHHHHHHHTTSEEEEEEEEECC
T ss_pred C-------cHHHHHHHHHHHhcCCEEEEEe
Confidence 2 1247888999999999998765
No 340
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=72.93 E-value=2.4 Score=43.75 Aligned_cols=94 Identities=15% Similarity=0.082 Sum_probs=55.2
Q ss_pred CeEEEECCCCchHHHHHh-hCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchhh
Q 009946 217 RNVLDVGCGVASFGAYLL-SHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La-~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d 295 (522)
.+||+++-+.|.++..+. ..+++.++ |...+. +..+..|..... .. ....+...||+|+.-.-.---...
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~~~~~~~~----~~~~~~-~~l~~~~~~~~~--~~--~~~~~~~~~d~v~~~~Pk~k~~~~ 117 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGRMAVERLE----TSRAAF-RCLTASGLQARL--AL--PWEAAAGAYDLVVLALPAGRGTAY 117 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTTBEEEEEE----CBHHHH-HHHHHTTCCCEE--CC--GGGSCTTCEEEEEEECCGGGCHHH
T ss_pred CcEEEecCCCCccccccCCCCceEEEe----CcHHHH-HHHHHcCCCccc--cC--CccCCcCCCCEEEEECCcchhHHH
Confidence 579999999998777776 33343331 222222 234445665532 11 121234679999832210001122
Q ss_pred hHHHHHHHHHhCCCCeEEEEEeCC
Q 009946 296 DGILLLELDRLLRPGGYFVYSSPE 319 (522)
Q Consensus 296 ~~~~L~ei~RvLkPGG~lvis~P~ 319 (522)
....|.++.+.|+|||.+++....
T Consensus 118 ~~~~l~~~~~~l~~g~~i~~~g~~ 141 (381)
T 3dmg_A 118 VQASLVAAARALRMGGRLYLAGDK 141 (381)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHhCCCCCEEEEEEcc
Confidence 467899999999999999987743
No 341
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=72.61 E-value=4.3 Score=41.06 Aligned_cols=94 Identities=13% Similarity=-0.009 Sum_probs=56.0
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCC-CCCC-----CCCCCceEEEec
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGT-KRLP-----YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~-~~lp-----f~d~sFDlVv~s 286 (522)
...+||-+|+|. |.++..++.. .+. .+...+.++...+.+++.|....+...+. .++. ...+.+|+|+-.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~ 268 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKA--AGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC 268 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 357899999863 5666666653 122 34444556666777887776433221110 1110 112369999843
Q ss_pred cccccchhhhHHHHHHHHHhCCCC-eEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPG-GYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPG-G~lvis~ 317 (522)
.. ....+....++|++| |++++..
T Consensus 269 ~g-------~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 269 AG-------RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SC-------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CC-------CHHHHHHHHHHHhcCCCEEEEEc
Confidence 21 124688899999999 9998765
No 342
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=72.44 E-value=2.8 Score=41.84 Aligned_cols=93 Identities=20% Similarity=0.097 Sum_probs=53.8
Q ss_pred CCCCeEEEECCC--CchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CCCCCceEEEe
Q 009946 214 GNIRNVLDVGCG--VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHC 285 (522)
Q Consensus 214 ~~~~~VLDIGCG--tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~d~sFDlVv~ 285 (522)
....+||-+|+| .|..+..++.. .+..+...+.++...+.+++.|....+... ..++. .....+|+|+.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~-~~~~~~~~~~~~~~~g~Dvvid 219 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQI--LNFRLIAVTRNNKHTEELLRLGAAYVIDTS-TAPLYETVMELTNGIGADAAID 219 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESSSTTHHHHHHHTCSEEEETT-TSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhCCCcEEEeCC-cccHHHHHHHHhCCCCCcEEEE
Confidence 345789999987 56677666653 123344444455556777777765433211 11110 12246999985
Q ss_pred ccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
+.. . ..+.+..++|++||++++..
T Consensus 220 ~~g-~-------~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 220 SIG-G-------PDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp SSC-H-------HHHHHHHHTEEEEEEEEECC
T ss_pred CCC-C-------hhHHHHHHHhcCCCEEEEEe
Confidence 432 1 12334458999999999865
No 343
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=72.01 E-value=4.4 Score=40.94 Aligned_cols=94 Identities=11% Similarity=-0.008 Sum_probs=55.7
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCC-CCCC-----CCCCCceEEEec
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGT-KRLP-----YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~-~~lp-----f~d~sFDlVv~s 286 (522)
...+||-+|+|. |.++..++.. .+. .+...+.++...+.+++.|....+...+. .++. ...+.+|+|+-.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~--~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~ 267 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKV--AGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFEC 267 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEEC
Confidence 457899999763 5666666653 123 34444556666677777776433221110 1110 112369999843
Q ss_pred cccccchhhhHHHHHHHHHhCCCC-eEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPG-GYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPG-G~lvis~ 317 (522)
.. ....+....++|+++ |++++..
T Consensus 268 ~g-------~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 268 IG-------NVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp SC-------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CC-------cHHHHHHHHHhhccCCcEEEEEe
Confidence 31 124688899999999 9999765
No 344
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=71.85 E-value=2.1 Score=42.88 Aligned_cols=94 Identities=14% Similarity=0.153 Sum_probs=56.6
Q ss_pred CCCeEEEECCC--CchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCC-----CCCC-CCceEEEec
Q 009946 215 NIRNVLDVGCG--VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-----PYPS-RSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCG--tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~l-----pf~d-~sFDlVv~s 286 (522)
..++||-+|+| .|..+..++... .+..+...+.++...+.+++.+....+...+ .+. .... +.+|+|+..
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~-~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAV-SGATIIGVDVREEAVEAAKRAGADYVINASM-QDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCCEEEEEESSHHHHHHHHHHTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEECCCccHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCEEecCCC-ccHHHHHHHHhcCCCceEEEEC
Confidence 34789999997 445555555431 0334555566777777777766543332111 111 0111 479999854
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.. ....+..+.++|++||++++..
T Consensus 248 ~g-------~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 248 NN-------SEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp CC-------CHHHHTTGGGGEEEEEEEEECC
T ss_pred CC-------CHHHHHHHHHHHhcCCEEEEEC
Confidence 32 1246788889999999998765
No 345
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=71.80 E-value=17 Score=38.69 Aligned_cols=144 Identities=8% Similarity=0.100 Sum_probs=75.1
Q ss_pred HHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcC---CCeEEEEeCCCCC
Q 009946 197 LALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRL 273 (522)
Q Consensus 197 ~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg---~~~~~~~~d~~~l 273 (522)
..+..+++.... ......-+++|+=||.|.+..-+....... +...|+.+...+.-+... +...+...|+.++
T Consensus 71 ~~l~~~~~~~p~--~~~~~~~~viDLFaG~GGlslG~~~aG~~~--v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i 146 (482)
T 3me5_A 71 AHLQTLLPKPPE--HHPHYAFRFIDLFAGIGGIRRGFESIGGQC--VFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDI 146 (482)
T ss_dssp HHHHTTSCCCCT--TTTCCSEEEEEESCTTSHHHHHHHTTTEEE--EEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHH
T ss_pred HHHHhhCCCCCc--cCCCccceEEEecCCccHHHHHHHHCCCEE--EEEEeCCHHHHHHHHHhcccCCCcceeccchhhh
Confidence 445555553221 111234689999999999999887663211 244466666655444432 3345555665443
Q ss_pred CCC-----------------CCCceEEEecc-----ccccc-----------h-hhh-HHHHHHHH---HhCCCCeEEEE
Q 009946 274 PYP-----------------SRSFELAHCSR-----CRIDW-----------L-QRD-GILLLELD---RLLRPGGYFVY 315 (522)
Q Consensus 274 pf~-----------------d~sFDlVv~s~-----~~l~~-----------~-~d~-~~~L~ei~---RvLkPGG~lvi 315 (522)
... -..+|+++.+. +.... . .+. ..++.++. +.++|.-.++=
T Consensus 147 ~~~~~~~~~~~~~~~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk~fvlE 226 (482)
T 3me5_A 147 TLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLE 226 (482)
T ss_dssp HCTTCTTSCHHHHHHHHHHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCSEEEEE
T ss_pred hhccccccchhhHHhhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCcEEEEe
Confidence 210 12589988632 11100 0 011 12444443 44578533332
Q ss_pred EeCCCCCCChhHHHHHHHHHHHHHhcCcEEE
Q 009946 316 SSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (522)
Q Consensus 316 s~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v 346 (522)
-++.... ......|..+.+.++++||.+.
T Consensus 227 NV~gl~s--~~~g~~f~~i~~~L~~lGY~v~ 255 (482)
T 3me5_A 227 NVKNLKS--HDKGKTFRIIMQTLDELGYDVA 255 (482)
T ss_dssp EETTTTT--GGGGHHHHHHHHHHHHTTEEET
T ss_pred CcHHHhc--ccCCcHHHHHHHHHhcCCcEEE
Confidence 2344322 2233467888888999998764
No 346
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=71.09 E-value=3.9 Score=41.48 Aligned_cols=94 Identities=14% Similarity=0.044 Sum_probs=56.9
Q ss_pred CCCeEEEECCC-CchHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeC-CCCCC-----CCCCCceEEEec
Q 009946 215 NIRNVLDVGCG-VASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLG-TKRLP-----YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCG-tG~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d-~~~lp-----f~d~sFDlVv~s 286 (522)
...+||=+|+| .|.++..++.. .+. .+...+.++..++.+++.|....+...+ ..++. ...+.+|+|+-.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~--~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~ 270 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKT--AGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFEC 270 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH--HTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEEC
Confidence 34679999986 36666666653 122 3444466666778888777644322111 11110 112369999843
Q ss_pred cccccchhhhHHHHHHHHHhCCCC-eEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPG-GYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPG-G~lvis~ 317 (522)
.. ....+....++|++| |++++..
T Consensus 271 ~g-------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 271 IG-------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SC-------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CC-------CHHHHHHHHHHhhccCCEEEEEc
Confidence 21 134788899999997 9999865
No 347
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=70.92 E-value=4.7 Score=39.74 Aligned_cols=90 Identities=18% Similarity=0.152 Sum_probs=57.3
Q ss_pred eEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCC-CCCCCCceEEEeccccccchh
Q 009946 218 NVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHCSRCRIDWLQ 294 (522)
Q Consensus 218 ~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~l-pf~d~sFDlVv~s~~~l~~~~ 294 (522)
+||=+|+ |.|.++..++.. .+..+...+.++...+.+++.|....+...+.... ....+.+|+|+-...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g------ 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHK--LGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG------ 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHH--TTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC------
T ss_pred eEEEECCCcHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC------
Confidence 3999997 467777777764 23345555556667778888776544432221111 122356999874321
Q ss_pred hhHHHHHHHHHhCCCCeEEEEEe
Q 009946 295 RDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
...+.+..++|+++|++++..
T Consensus 221 --~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 221 --DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp --HHHHHHHHHTEEEEEEEEECC
T ss_pred --cHHHHHHHHHHhcCCEEEEEe
Confidence 137889999999999999865
No 348
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=70.71 E-value=4.1 Score=40.62 Aligned_cols=93 Identities=11% Similarity=0.064 Sum_probs=59.9
Q ss_pred CCCeEEEECCCC-chHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CCCCCceEEEecc
Q 009946 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIGCGt-G~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~d~sFDlVv~s~ 287 (522)
...+||=+|+|. |.++..+++.. -+..+...+.++...+.+++.|....+... .++. .....+|+|+-..
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~-g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~--~~~~~~v~~~t~g~g~d~v~d~~ 247 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAV-SAARVIAVDLDDDRLALAREVGADAAVKSG--AGAADAIRELTGGQGATAVFDFV 247 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESCHHHHHHHHHTTCSEEEECS--TTHHHHHHHHHGGGCEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcCC--CcHHHHHHHHhCCCCCeEEEECC
Confidence 357899999864 66667776531 134555567788888899888865433211 1110 0113689998433
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ....+....++|++||++++..
T Consensus 248 G-------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 248 G-------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp C-------CHHHHHHHHHHEEEEEEEEECS
T ss_pred C-------CHHHHHHHHHHHhcCCEEEEEC
Confidence 1 1247889999999999999865
No 349
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=70.18 E-value=3 Score=41.48 Aligned_cols=92 Identities=13% Similarity=0.078 Sum_probs=57.1
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHH-HHcCCCeEEEEeCCCCCC-----CCCCCceEEEec
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFA-LERGIPSTLGVLGTKRLP-----YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A-~~rg~~~~~~~~d~~~lp-----f~d~sFDlVv~s 286 (522)
..++||-+|+ |.|..+..++.. .+..+...+.++...+.+ ++.|....+...+ .++. ...+.+|+|+.+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~ 225 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARL--KGCRVVGIAGGAEKCRFLVEELGFDGAIDYKN-EDLAAGLKRECPKGIDVFFDN 225 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCCSEEEETTT-SCHHHHHHHHCTTCEEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHcCCCEEEECCC-HHHHHHHHHhcCCCceEEEEC
Confidence 4578999998 456676666654 234555556677777777 5556543322111 1110 012469999854
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.. ...+....+.|++||++++..
T Consensus 226 ~g--------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 226 VG--------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp SC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred CC--------cchHHHHHHHHhhCCEEEEEe
Confidence 32 136888899999999999854
No 350
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=70.10 E-value=4.7 Score=40.76 Aligned_cols=94 Identities=12% Similarity=-0.002 Sum_probs=56.4
Q ss_pred CCCeEEEECCC-CchHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCC-CCCC-----CCCCCceEEEec
Q 009946 215 NIRNVLDVGCG-VASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGT-KRLP-----YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCG-tG~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~-~~lp-----f~d~sFDlVv~s 286 (522)
...+||-+|+| .|.++..++.. .+. .+...+.++...+.+++.|....+...+. .++. ...+.+|+|+-.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~ 272 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKI--AGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 272 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEEC
Confidence 45789999986 35666666654 133 34444556666778887776433221110 1110 011369999843
Q ss_pred cccccchhhhHHHHHHHHHhCCCC-eEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPG-GYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPG-G~lvis~ 317 (522)
.. ....+.+..++|++| |++++..
T Consensus 273 ~G-------~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 273 AG-------TAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SC-------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CC-------CHHHHHHHHHHhhcCCCEEEEEC
Confidence 21 134688899999999 9999765
No 351
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=68.64 E-value=5.6 Score=39.72 Aligned_cols=91 Identities=11% Similarity=0.063 Sum_probs=56.4
Q ss_pred CCCeEEEECCC-CchHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC--------CCCCCceEEE
Q 009946 215 NIRNVLDVGCG-VASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGCG-tG~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp--------f~d~sFDlVv 284 (522)
...+||-+|+| .|.++..++.. .+. .+...+.++...+.+++.|....+ +...-. .....+|+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~--~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~---~~~~~~~~~~v~~~~~g~g~D~vi 241 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKA--SGAYPVIVSEPSDFRRELAKKVGADYVI---NPFEEDVVKEVMDITDGNGVDVFL 241 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH--TTCCSEEEECSCHHHHHHHHHHTCSEEE---CTTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHhCCCEEE---CCCCcCHHHHHHHHcCCCCCCEEE
Confidence 34679999985 35666666653 133 444556677777888877754322 221111 1123699998
Q ss_pred eccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
-... ....+..+.++|+++|+++...
T Consensus 242 d~~g-------~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 242 EFSG-------APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp ECSC-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred ECCC-------CHHHHHHHHHHHhcCCEEEEEc
Confidence 4431 1246788899999999998765
No 352
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=67.94 E-value=5.4 Score=40.11 Aligned_cols=90 Identities=14% Similarity=0.163 Sum_probs=56.0
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC--------CCCCCceEEE
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp--------f~d~sFDlVv 284 (522)
...+||-+|+ |.|..+..++... +..+...+.++...+.+++.+....+ +..+.. ...+.+|+|+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~~~---d~~~~~~~~~~~~~~~~~~~D~vi 244 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQNGAHEVF---NHREVNYIDKIKKYVGEKGIDIII 244 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEE---ETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHcCCCEEE---eCCCchHHHHHHHHcCCCCcEEEE
Confidence 4578999997 4556666665431 34555556677777777776654322 222111 1123699998
Q ss_pred eccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.+.. ...+....++|++||++++..
T Consensus 245 ~~~G--------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 245 EMLA--------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp ESCH--------HHHHHHHHHHEEEEEEEEECC
T ss_pred ECCC--------hHHHHHHHHhccCCCEEEEEe
Confidence 5431 125678889999999999765
No 353
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=66.45 E-value=6.7 Score=39.09 Aligned_cols=90 Identities=11% Similarity=0.063 Sum_probs=57.5
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC--------CCCCCceEEE
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp--------f~d~sFDlVv 284 (522)
...+||-+|+ |.|..+..++... +..+...+.++...+.+++.|....+ |..+.. .....+|+|+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~ga~~~~---d~~~~~~~~~~~~~~~~~~~d~vi 240 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKALGADETV---NYTHPDWPKEVRRLTGGKGADKVV 240 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSEEE---ETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCCEEE---cCCcccHHHHHHHHhCCCCceEEE
Confidence 4578999998 5777777776542 33555556667777777776654322 222111 1124699998
Q ss_pred eccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.... . ..+..+.++|+++|++++..
T Consensus 241 ~~~g--~------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 241 DHTG--A------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp ESSC--S------SSHHHHHHHEEEEEEEEESS
T ss_pred ECCC--H------HHHHHHHHhhccCCEEEEEe
Confidence 5432 1 25778889999999998755
No 354
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=65.60 E-value=2.3 Score=41.88 Aligned_cols=88 Identities=16% Similarity=0.149 Sum_probs=52.5
Q ss_pred CCCCeEEEECCC-CchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccc
Q 009946 214 GNIRNVLDVGCG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 214 ~~~~~VLDIGCG-tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~ 292 (522)
....+||=+|+| .|.++..+++. .+..+...+ ++...+.+++.|....+ -|.+.+ .+.+|+|+-... -
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~--~Ga~Vi~~~-~~~~~~~~~~lGa~~v~--~d~~~v---~~g~Dvv~d~~g-~-- 209 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNN--AGYVVDLVS-ASLSQALAAKRGVRHLY--REPSQV---TQKYFAIFDAVN-S-- 209 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHH--HTCEEEEEC-SSCCHHHHHHHTEEEEE--SSGGGC---CSCEEEEECC------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEE-ChhhHHHHHHcCCCEEE--cCHHHh---CCCccEEEECCC-c--
Confidence 345789999995 36677777654 123444444 55556777777754333 133333 467999984321 1
Q ss_pred hhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 293 LQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
..+....++|++||+++...
T Consensus 210 -----~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 210 -----QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ---------TTGGGEEEEEEEEEEC
T ss_pred -----hhHHHHHHHhcCCCEEEEEe
Confidence 12356789999999999874
No 355
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=63.92 E-value=11 Score=38.49 Aligned_cols=98 Identities=12% Similarity=-0.012 Sum_probs=55.6
Q ss_pred CCCCeEEEECCCC-chHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC--------CCCCCceEE
Q 009946 214 GNIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELA 283 (522)
Q Consensus 214 ~~~~~VLDIGCGt-G~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp--------f~d~sFDlV 283 (522)
....+||=+|+|. |.++..++.. .+. .+...+.++...+.+++.|....+ +..... .....+|+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKH--AGASKVILSEPSEVRRNLAKELGADHVI---DPTKENFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCHHHHHHHHHHTCSEEE---CTTTSCHHHHHHHHTTTCCCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHcCCCEEE---cCCCCCHHHHHHHHhCCCCCCEE
Confidence 3457899999853 5666666654 233 455567788888889888764332 221111 122369999
Q ss_pred EeccccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
+-... .. ......++.-+.+++++||++++...
T Consensus 287 id~~g-~~-~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 287 LEATG-VP-QLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp EECSS-CH-HHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred EECCC-Cc-HHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 84321 10 00112233333355599999998653
No 356
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=63.33 E-value=7 Score=39.84 Aligned_cols=71 Identities=13% Similarity=-0.114 Sum_probs=44.9
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc-CCCeEEEEeCCCCCC--CC----CCCceEEEe
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLP--YP----SRSFELAHC 285 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r-g~~~~~~~~d~~~lp--f~----d~sFDlVv~ 285 (522)
+...++|..||.|..+..|+++--....+.+.|..+.+++.++.. ..++.++..+..++. .+ .+++|.|+.
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~g~~~~vDgILf 134 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILL 134 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHHTTCTTCEEEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHhcCCCCcccEEEE
Confidence 346899999999999999987621223455667777777777421 234566666655442 00 135777776
No 357
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=63.21 E-value=5.4 Score=39.54 Aligned_cols=93 Identities=15% Similarity=0.058 Sum_probs=57.9
Q ss_pred CCCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CCCCCceEEEe
Q 009946 214 GNIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHC 285 (522)
Q Consensus 214 ~~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~d~sFDlVv~ 285 (522)
....+||-+|+ |.|..+..++.. .+..+...+.++..++.+++.|....+.. ...++. .....+|+|+.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~-~~~~~~~~~~~~~~~~g~D~vid 223 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKM--KGAHTIAVASTDEKLKIAKEYGAEYLINA-SKEDILRQVLKFTNGKGVDASFD 223 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCSEEEET-TTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCcEEEeC-CCchHHHHHHHHhCCCCceEEEE
Confidence 34578999995 455666666654 24455556677777788888775433321 111110 11246999985
Q ss_pred ccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
+.. . ..+....++|++||++++..
T Consensus 224 ~~g-~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 224 SVG-K-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CCG-G-------GGHHHHHHHEEEEEEEEECC
T ss_pred CCC-h-------HHHHHHHHHhccCCEEEEEc
Confidence 432 1 35778889999999999854
No 358
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=63.16 E-value=8.8 Score=38.48 Aligned_cols=88 Identities=13% Similarity=0.090 Sum_probs=53.7
Q ss_pred CeEEEECCC-CchHH-HHHh-hCCCcccc-cCcccccHH---HHHHHHHcCCCeEEEEeCCCCCCCC-----CCCceEEE
Q 009946 217 RNVLDVGCG-VASFG-AYLL-SHDIIAMS-LAPNDVHEN---QIQFALERGIPSTLGVLGTKRLPYP-----SRSFELAH 284 (522)
Q Consensus 217 ~~VLDIGCG-tG~~a-~~La-~~~v~gvd-is~~Dis~a---~i~~A~~rg~~~~~~~~d~~~lpf~-----d~sFDlVv 284 (522)
.+||=+|+| .|.++ ..++ .. .+.. +...+.++. ..+.+++.|.... +..+-.+. .+.||+|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~--~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v----~~~~~~~~~i~~~~gg~Dvvi 247 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDD--KGYENLYCLGRRDRPDPTIDIIEELDATYV----DSRQTPVEDVPDVYEQMDFIY 247 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCT--TCCCEEEEEECCCSSCHHHHHHHHTTCEEE----ETTTSCGGGHHHHSCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHH--cCCcEEEEEeCCcccHHHHHHHHHcCCccc----CCCccCHHHHHHhCCCCCEEE
Confidence 689999985 35666 6777 54 2333 444455554 5677777765322 22211111 13699998
Q ss_pred eccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
-... ....+.++.++|++||++++..
T Consensus 248 d~~g-------~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 248 EATG-------FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp ECSC-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred ECCC-------ChHHHHHHHHHHhcCCEEEEEe
Confidence 4321 1236788999999999999765
No 359
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=62.64 E-value=12 Score=37.67 Aligned_cols=93 Identities=14% Similarity=0.186 Sum_probs=59.2
Q ss_pred CCCeEEEEC-CC-CchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeC-----CCCCCCCCCCceEEEecc
Q 009946 215 NIRNVLDVG-CG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLG-----TKRLPYPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIG-CG-tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d-----~~~lpf~d~sFDlVv~s~ 287 (522)
...+||=+| +| .|.++..++.. ..+..+...+.++...+.+++.|....+...+ ..++ ..+.+|+|+-..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~-~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~--~~~g~Dvvid~~ 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQ-RTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAAL--GLGAPAFVFSTT 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHH-HCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTT--CSCCEEEEEECS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHh--cCCCceEEEECC
Confidence 456899998 44 57777777763 01345556677778888888877543322111 0111 235799988432
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ....+.++.++|++||++++..
T Consensus 248 g-------~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 248 H-------TDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp C-------HHHHHHHHHHHSCTTCEEEECS
T ss_pred C-------chhhHHHHHHHhcCCCEEEEEC
Confidence 1 1247888999999999999753
No 360
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=62.55 E-value=4.4 Score=40.14 Aligned_cols=93 Identities=13% Similarity=0.023 Sum_probs=58.2
Q ss_pred CCCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CCCCCceEEEe
Q 009946 214 GNIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHC 285 (522)
Q Consensus 214 ~~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~d~sFDlVv~ 285 (522)
....+||-+|+ |.|..+..++.. .+..+...+.++..++.+++.|....+.. ...++. .....+|+|+.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~-~~~~~~~~~~~~~~~~g~Dvvid 215 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKA--LGAKLIGTVSSPEKAAHAKALGAWETIDY-SHEDVAKRVLELTDGKKCPVVYD 215 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHTCSEEEET-TTSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCCEEEeC-CCccHHHHHHHHhCCCCceEEEE
Confidence 34578999983 456677666654 23455555667777888888775433321 111110 12246999985
Q ss_pred ccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
+.. . ..+....++|++||++++..
T Consensus 216 ~~g-~-------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 216 GVG-Q-------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp SSC-G-------GGHHHHHTTEEEEEEEEECC
T ss_pred CCC-h-------HHHHHHHHHhcCCCEEEEEe
Confidence 432 1 25778889999999999865
No 361
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=62.14 E-value=1.7 Score=43.97 Aligned_cols=95 Identities=18% Similarity=0.213 Sum_probs=53.8
Q ss_pred CCCeEEEECCC-CchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCC--CCCCCCceEEEecccccc
Q 009946 215 NIRNVLDVGCG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL--PYPSRSFELAHCSRCRID 291 (522)
Q Consensus 215 ~~~~VLDIGCG-tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~l--pf~d~sFDlVv~s~~~l~ 291 (522)
...+||-+|+| .|.++..++.. .+..+...+.++..++.+++.|....+...+..++ ... +.+|+|+......
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~--~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid~~g~~- 254 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKA--MGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVVCASSL- 254 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEECCSCS-
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEECCCCC-
Confidence 34789999985 35666666653 13334444555556677777775433321111011 011 4699998543210
Q ss_pred chhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 292 WLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
....+..+.++|++||++++..
T Consensus 255 ----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 255 ----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp ----TTCCTTTGGGGEEEEEEEEECC
T ss_pred ----cHHHHHHHHHHhcCCCEEEEec
Confidence 0123566778999999998754
No 362
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=60.27 E-value=68 Score=31.30 Aligned_cols=128 Identities=7% Similarity=0.013 Sum_probs=69.8
Q ss_pred eEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCC-CCCceEEEecc-----ccc-
Q 009946 218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-SRSFELAHCSR-----CRI- 290 (522)
Q Consensus 218 ~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~-d~sFDlVv~s~-----~~l- 290 (522)
+|||+=||.|.+..-|.+..+..+ ...|+.+.+.+.-+.. .+..+...|+.++... -...|+++.+. +..
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v--~a~e~d~~a~~ty~~N-~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag 78 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRII--CANEYDKSIWKTYESN-HSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGG 78 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEE--EEEECCTTTHHHHHHH-CCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETT
T ss_pred eEEEeCcCccHHHHHHHHCCCEEE--EEEeCCHHHHHHHHHH-CCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCC
Confidence 699999999999888877633211 2334444444433333 3346677787766421 12589998632 111
Q ss_pred --cchhhh-HHHHHH---HHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 291 --DWLQRD-GILLLE---LDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 291 --~~~~d~-~~~L~e---i~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
.-..|. ..++.+ +.+.+||.-.++=-++..... .....+..+...++++||.+....-
T Consensus 79 ~~~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~gl~~~--~~~~~~~~i~~~l~~~GY~v~~~vl 142 (331)
T 3ubt_Y 79 SLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMMAQ--RHNKAVQEFIQEFDNAGYDVHIILL 142 (331)
T ss_dssp EECCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCGGGGC--TTSHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CccCCCCchhHHHHHHHHHHhccCCeEEEeeeecccccc--cccchhhhhhhhhccCCcEEEEEec
Confidence 112232 234443 445568963333222322211 1224577788888999998765543
No 363
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=60.04 E-value=4.8 Score=39.80 Aligned_cols=90 Identities=19% Similarity=0.214 Sum_probs=51.8
Q ss_pred eEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCC--CCC-CCCCCCceEEEeccccccc
Q 009946 218 NVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT--KRL-PYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 218 ~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~--~~l-pf~d~sFDlVv~s~~~l~~ 292 (522)
+||-+|+ |.|.++..++... +..+...+.++...+.+++.|....+...+. ..+ ....+.+|+|+-... -
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g-~-- 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVG-G-- 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECST-T--
T ss_pred eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCc-H--
Confidence 6999997 4667777776541 2233333444455567777665433321111 000 122346999984431 1
Q ss_pred hhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 293 LQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
..+....++|++||++++..
T Consensus 227 -----~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 227 -----RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp -----TTHHHHHHTEEEEEEEEECS
T ss_pred -----HHHHHHHHhhccCCEEEEEe
Confidence 24778889999999999764
No 364
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=59.83 E-value=9.5 Score=37.85 Aligned_cols=72 Identities=18% Similarity=0.098 Sum_probs=47.3
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCC----CCCceEEEec
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP----SRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~----d~sFDlVv~s 286 (522)
...+++|+=||.|.++..+....+...-+...|+.+...+.-+.+.....+...|+.++... ...+|+++.+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 34689999999999998887763221112556777776665555544556677787766421 1368999974
No 365
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=59.43 E-value=9.7 Score=38.35 Aligned_cols=92 Identities=13% Similarity=0.101 Sum_probs=58.5
Q ss_pred CCCeEEEEC--CCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC-----CCCCCceEEEecc
Q 009946 215 NIRNVLDVG--CGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIG--CGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp-----f~d~sFDlVv~s~ 287 (522)
...+||-+| .|.|..+..++... +..+...+.++...+.+++.|....+. .+..++. ...+.+|+|+...
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~-~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKSLGCDRPIN-YKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEE-TTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCCcEEEe-cCChhHHHHHHHhcCCCCCEEEECC
Confidence 347899999 35777777777542 345555566777778888776543322 1111110 0124699998543
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ...+..+.++|+++|++++..
T Consensus 240 g--------~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 240 G--------GAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp C--------THHHHHHHHHEEEEEEEEECC
T ss_pred C--------HHHHHHHHHHHhcCCEEEEEe
Confidence 2 146788899999999998765
No 366
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=59.22 E-value=7.3 Score=39.53 Aligned_cols=94 Identities=21% Similarity=0.262 Sum_probs=58.0
Q ss_pred CCCeEEEECCC-CchHHHHHhhCCCcc-cccCcccccHHHHHHHHHcCCCeEEEEeC--CCC----CC--CCCCCceEEE
Q 009946 215 NIRNVLDVGCG-VASFGAYLLSHDIIA-MSLAPNDVHENQIQFALERGIPSTLGVLG--TKR----LP--YPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGCG-tG~~a~~La~~~v~g-vdis~~Dis~a~i~~A~~rg~~~~~~~~d--~~~----lp--f~d~sFDlVv 284 (522)
...+||-+|+| .|.++..++.. .+ ..+...+.++..++.+++.|....+.... ..+ +. .....+|+|+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvi 272 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARS--LGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFIL 272 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHH--TTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHH--cCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEE
Confidence 34789999965 35666666654 24 35666677788888888877643332110 000 00 1123699998
Q ss_pred eccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
-... . ...+.+..++|++||++++..
T Consensus 273 d~~g-~------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 273 EATG-D------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp ECSS-C------TTHHHHHHHHEEEEEEEEECC
T ss_pred ECCC-C------HHHHHHHHHHHhcCCEEEEEe
Confidence 4331 1 136788889999999998754
No 367
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=58.26 E-value=7.2 Score=38.94 Aligned_cols=91 Identities=12% Similarity=0.061 Sum_probs=55.0
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CCCCCceEEEec
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~d~sFDlVv~s 286 (522)
...+||=+|+ |.|.++..++... +..+...+.++...+.+++.|....+. .+ .++. .....+|+|+-.
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~v~~-~~-~~~~~~v~~~~~~~g~Dvvid~ 234 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKSVGADIVLP-LE-EGWAKAVREATGGAGVDMVVDP 234 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSEEEE-SS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCcEEec-Cc-hhHHHHHHHHhCCCCceEEEEC
Confidence 4578999997 4567777776541 334444455555667777776543332 11 1111 122369999854
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.. . ..+....+.|++||.+++..
T Consensus 235 ~g-~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 235 IG-G-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp CC----------CHHHHHHTEEEEEEEEEC-
T ss_pred Cc-h-------hHHHHHHHhhcCCCEEEEEE
Confidence 32 1 25778889999999999754
No 368
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=57.66 E-value=6.2 Score=38.95 Aligned_cols=92 Identities=14% Similarity=0.012 Sum_probs=54.5
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CCCCCceEEEec
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~d~sFDlVv~s 286 (522)
..++||-+|+ |.|..+..++.. .+..+...+.++...+.+++.+....+. ....++. ...+.+|+|+.+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~--~G~~V~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~D~vi~~ 216 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKA--LGAKLIGTVGTAQKAQSALKAGAWQVIN-YREEDLVERLKEITGGKKVRVVYDS 216 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHcCCCEEEE-CCCccHHHHHHHHhCCCCceEEEEC
Confidence 4578999994 455555555543 1334444556666667777666543322 1111110 112369999854
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.. ...+..+.++|++||++++..
T Consensus 217 ~g--------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 217 VG--------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp SC--------GGGHHHHHHTEEEEEEEEECC
T ss_pred Cc--------hHHHHHHHHHhcCCCEEEEEe
Confidence 32 135788889999999998765
No 369
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=56.95 E-value=5.4 Score=39.45 Aligned_cols=90 Identities=16% Similarity=0.180 Sum_probs=51.9
Q ss_pred eEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCC--CCC-CCCCCCceEEEeccccccc
Q 009946 218 NVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT--KRL-PYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 218 ~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~--~~l-pf~d~sFDlVv~s~~~l~~ 292 (522)
+||=+|+ |.|.++..++.. .+..+...+.++...+.+++.|....+...+. ..+ ....+.+|+|+-...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~--~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g---- 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNK--RGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG---- 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHH--HTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC----
T ss_pred eEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCc----
Confidence 6999997 456666666653 12233333334444566666665433321111 111 122346999984431
Q ss_pred hhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 293 LQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ..+.+..++|++||++++..
T Consensus 227 --~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 227 --G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp --T--HHHHHHHTTEEEEEEEEECC
T ss_pred --H--HHHHHHHHhhcCCCEEEEEe
Confidence 1 25788899999999999764
No 370
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=56.05 E-value=12 Score=37.33 Aligned_cols=91 Identities=13% Similarity=0.233 Sum_probs=56.4
Q ss_pred CCCeEEEEC-CC-CchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC-----CCCCCceEEEecc
Q 009946 215 NIRNVLDVG-CG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YPSRSFELAHCSR 287 (522)
Q Consensus 215 ~~~~VLDIG-CG-tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp-----f~d~sFDlVv~s~ 287 (522)
...+||=+| +| .|.++..++.. .+..+...+.++...+.+++.|....+.. ..++. ...+.+|+|+-..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~--~~~~~~~~~~~~~~g~Dvv~d~~ 225 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA--YGLRVITTASRNETIEWTKKMGADIVLNH--KESLLNQFKTQGIELVDYVFCTF 225 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH--TTCEEEEECCSHHHHHHHHHHTCSEEECT--TSCHHHHHHHHTCCCEEEEEESS
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhcCCcEEEEC--CccHHHHHHHhCCCCccEEEECC
Confidence 357899984 43 46666666654 24456666777778888888775433211 11100 1224699998432
Q ss_pred ccccchhhhHHHHHHHHHhCCCCeEEEEE
Q 009946 288 CRIDWLQRDGILLLELDRLLRPGGYFVYS 316 (522)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvis 316 (522)
. ....+..+.++|+++|+++..
T Consensus 226 g-------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 226 N-------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp C-------HHHHHHHHHHHEEEEEEEEES
T ss_pred C-------chHHHHHHHHHhccCCEEEEE
Confidence 1 234678889999999999764
No 371
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=55.84 E-value=17 Score=35.97 Aligned_cols=96 Identities=13% Similarity=0.126 Sum_probs=57.3
Q ss_pred CCCeEEEECCCCc-hHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCC---CC--CCCCCceEEEeccc
Q 009946 215 NIRNVLDVGCGVA-SFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR---LP--YPSRSFELAHCSRC 288 (522)
Q Consensus 215 ~~~~VLDIGCGtG-~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~---lp--f~d~sFDlVv~s~~ 288 (522)
...+||=+|+|.+ .++..++.+ ..+..+...+.++...+.+++.|....+...+... +. .....+|.++...
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~-~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~- 240 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKN-VFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCA- 240 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECC-
T ss_pred CCCEEEEEcCCCccHHHHHHHHH-hCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEec-
Confidence 3578999999864 444444432 12445556677888888888887765443222110 00 1123466665322
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
. ....+....+.|+++|.+++...
T Consensus 241 -~-----~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 241 -V-----ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp -S-----CHHHHHHHHHTEEEEEEEEECCC
T ss_pred -c-----CcchhheeheeecCCceEEEEec
Confidence 1 13578888999999999988653
No 372
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=55.39 E-value=4.6 Score=39.47 Aligned_cols=92 Identities=13% Similarity=0.064 Sum_probs=52.9
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccc
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~ 292 (522)
...+||-+|+ |.|..+..++... +..+...+.++...+.+++.|....+...+..++.-.-+.+|+|+. .. .
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g-~-- 198 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VR-G-- 198 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CS-C--
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CC-H--
Confidence 3478999998 4566776666541 3344444555555566766665432221110111000046999985 32 1
Q ss_pred hhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 293 LQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
..+....++|+++|+++...
T Consensus 199 -----~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 199 -----KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp -----TTHHHHHTTEEEEEEEEEC-
T ss_pred -----HHHHHHHHhhccCCEEEEEe
Confidence 25778889999999998754
No 373
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=55.33 E-value=9.7 Score=37.67 Aligned_cols=90 Identities=16% Similarity=0.031 Sum_probs=55.8
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC--------CCCCCceEEE
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp--------f~d~sFDlVv 284 (522)
...+||-+|+ |.|..+..++... +..+...+.++...+.+++.+....+ +..+.. .....+|+|+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~i~~~~~~~~~d~vi 219 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARKLGCHHTI---NYSTQDFAEVVREITGGKGVDVVY 219 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSEEE---ETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCCEEE---ECCCHHHHHHHHHHhCCCCCeEEE
Confidence 4578999995 5677666666432 33455556666666777766654322 221111 0123699998
Q ss_pred eccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.+.. . ..+..+.++|++||++++..
T Consensus 220 ~~~g-~-------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 220 DSIG-K-------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp ECSC-T-------TTHHHHHHTEEEEEEEEECC
T ss_pred ECCc-H-------HHHHHHHHhhccCCEEEEEe
Confidence 5432 1 35778889999999998765
No 374
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=55.15 E-value=9.2 Score=38.33 Aligned_cols=92 Identities=13% Similarity=0.004 Sum_probs=55.0
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CCCCCceEEEec
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCS 286 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~d~sFDlVv~s 286 (522)
...+||-+|+ |.|..+..++... +..+...+.++...+.+++.+....+. .+..++. ...+.+|+|+.+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~ 238 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEKLGAAAGFN-YKKEDFSEATLKFTKGAGVNLILDC 238 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCcEEEe-cCChHHHHHHHHHhcCCCceEEEEC
Confidence 4578999984 4566666665431 334555566777777777666543322 1111100 112469999854
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.. . ..+.+..++|++||++++..
T Consensus 239 ~G-~-------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 239 IG-G-------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp SC-G-------GGHHHHHHHEEEEEEEEECC
T ss_pred CC-c-------hHHHHHHHhccCCCEEEEEe
Confidence 32 1 14677789999999999865
No 375
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=54.40 E-value=14 Score=36.76 Aligned_cols=90 Identities=13% Similarity=0.150 Sum_probs=56.8
Q ss_pred CCCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CCCCCceEEEe
Q 009946 214 GNIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHC 285 (522)
Q Consensus 214 ~~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~d~sFDlVv~ 285 (522)
....+||=+|+ |.|.++..++... +..+... .++..++.+++.|... +. ...++. .....+|+|+-
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~lGa~~-i~--~~~~~~~~~~~~~~~~g~D~vid 222 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRDLGATP-ID--ASREPEDYAAEHTAGQGFDLVYD 222 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHHHTSEE-EE--TTSCHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHHcCCCE-ec--cCCCHHHHHHHHhcCCCceEEEE
Confidence 34578999994 3567777776542 3344444 5666778888877644 22 222111 11246999984
Q ss_pred ccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
... ...+....+.|+++|.+++..
T Consensus 223 ~~g--------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 223 TLG--------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp SSC--------THHHHHHHHHEEEEEEEEESC
T ss_pred CCC--------cHHHHHHHHHHhcCCeEEEEc
Confidence 331 136788889999999999754
No 376
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=51.78 E-value=29 Score=35.98 Aligned_cols=93 Identities=11% Similarity=0.042 Sum_probs=57.7
Q ss_pred CCCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC-----------------
Q 009946 214 GNIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP----------------- 274 (522)
Q Consensus 214 ~~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp----------------- 274 (522)
....+||=+|+ |.|.++..++... +..+...+.++..++.+++.|....+... ..++.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~-~~d~~~~~~~~~~~~~~~~~~~ 303 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRAMGAEAIIDRN-AEGYRFWKDENTQDPKEWKRFG 303 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCCEEEETT-TTTCCSEEETTEECHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCCcEEEecC-cCcccccccccccchHHHHHHH
Confidence 34578999997 3567777776542 33433344567778888887765433211 11110
Q ss_pred ------CCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 275 ------YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 275 ------f~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.....+|+|+-... ...+....++|++||.+++..
T Consensus 304 ~~i~~~t~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 304 KRIRELTGGEDIDIVFEHPG--------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHTSCCEEEEEECSC--------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHhCCCCCcEEEEcCC--------chhHHHHHHHhhCCcEEEEEe
Confidence 01246999884321 146788889999999999865
No 377
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=50.01 E-value=17 Score=36.24 Aligned_cols=88 Identities=6% Similarity=0.022 Sum_probs=53.1
Q ss_pred CeEEEECC--CCchHHHHHhhCCCccc-ccCcccccHHHHHHHHH-cCCCeEEEEeCCCCCC-------CCCCCceEEEe
Q 009946 217 RNVLDVGC--GVASFGAYLLSHDIIAM-SLAPNDVHENQIQFALE-RGIPSTLGVLGTKRLP-------YPSRSFELAHC 285 (522)
Q Consensus 217 ~~VLDIGC--GtG~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~-rg~~~~~~~~d~~~lp-------f~d~sFDlVv~ 285 (522)
.+||-+|+ |.|..+..++.. .+. .+...+.++...+.+++ .|....+ |..+.. ...+.+|+|+.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~--~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~~~~~~~~~~d~vi~ 236 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHF--LGCSRVVGICGTHEKCILLTSELGFDAAI---NYKKDNVAEQLRESCPAGVDVYFD 236 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHTSCCSEEE---ETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHH--CCCCeEEEEeCCHHHHHHHHHHcCCceEE---ecCchHHHHHHHHhcCCCCCEEEE
Confidence 78999998 455555555543 133 44445666666676665 4543222 221111 01126899985
Q ss_pred ccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
+.. ...+....++|++||++++..
T Consensus 237 ~~G--------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 237 NVG--------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp SCC--------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCC--------HHHHHHHHHHhccCcEEEEEC
Confidence 432 146888899999999999764
No 378
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=49.31 E-value=4 Score=41.06 Aligned_cols=94 Identities=13% Similarity=0.067 Sum_probs=50.8
Q ss_pred CCCeEEEECCC-CchHHHHHhhCCCcccccCcccccHHHHHHHH-HcCCCeEEEEeCCCCCCCCCCCceEEEeccccccc
Q 009946 215 NIRNVLDVGCG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFAL-ERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 215 ~~~~VLDIGCG-tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~-~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~ 292 (522)
...+||=+|+| .|.++..++.. .+..+...+.++..++.++ +.|....+...+...+.-..+.+|+|+-... ..
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~--~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g-~~- 255 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKA--MGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVP-VH- 255 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCC-SC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCC-Ch-
Confidence 34689999975 34555556543 1234444455555556666 5554332221110000000136999984331 11
Q ss_pred hhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 293 LQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
..+....++|++||++++..
T Consensus 256 -----~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 256 -----HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp -----CCSHHHHTTEEEEEEEEECS
T ss_pred -----HHHHHHHHHhccCCEEEEeC
Confidence 13566778999999999865
No 379
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=47.93 E-value=9.6 Score=37.91 Aligned_cols=89 Identities=16% Similarity=0.127 Sum_probs=52.2
Q ss_pred CCeEEEECCC-CchHHHHHhhCCCccc-ccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCC-------CCCCceEEEec
Q 009946 216 IRNVLDVGCG-VASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY-------PSRSFELAHCS 286 (522)
Q Consensus 216 ~~~VLDIGCG-tG~~a~~La~~~v~gv-dis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf-------~d~sFDlVv~s 286 (522)
..+||-+|+| .|.++..++.. .+. .+...+.++..++.+++. .. .+ .+..+-.+ ..+.+|+|+-.
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~~--~Ga~~Vi~~~~~~~~~~~~~~l-a~-~v--~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVRA--SGAGPILVSDPNPYRLAFARPY-AD-RL--VNPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH--TTCCSEEEECSCHHHHGGGTTT-CS-EE--ECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHh-HH-hc--cCcCccCHHHHHHHhcCCCCCEEEEC
Confidence 4679999985 25666666653 133 444556666666666543 21 11 22221111 02369999844
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.. ....+....++|+++|++++..
T Consensus 239 ~g-------~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 239 SG-------NEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SC-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CC-------CHHHHHHHHHHHhcCCEEEEEe
Confidence 31 1246788899999999998765
No 380
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=47.79 E-value=23 Score=35.21 Aligned_cols=41 Identities=12% Similarity=0.035 Sum_probs=29.2
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHc
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER 259 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~r 259 (522)
...|||.-||+|+.+...... +-...+.|+.+...+.+++|
T Consensus 253 ~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r 293 (323)
T 1boo_A 253 DDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFR 293 (323)
T ss_dssp TCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGG
T ss_pred CCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHH
Confidence 467999999999887766543 22344446677777888777
No 381
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=45.74 E-value=22 Score=35.73 Aligned_cols=93 Identities=16% Similarity=0.131 Sum_probs=54.9
Q ss_pred CCCCeEEEECCC--CchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC-----CCCCCceEEEec
Q 009946 214 GNIRNVLDVGCG--VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YPSRSFELAHCS 286 (522)
Q Consensus 214 ~~~~~VLDIGCG--tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp-----f~d~sFDlVv~s 286 (522)
....+||=+|++ .|.++..++... +..+... .++...+.+++.|....+.. ...++. ...+.+|+|+-.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~-~~~~~~~~~~~lGa~~vi~~-~~~~~~~~v~~~t~g~~d~v~d~ 238 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIAT-CSPHNFDLAKSRGAEEVFDY-RAPNLAQTIRTYTKNNLRYALDC 238 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE-ECGGGHHHHHHTTCSEEEET-TSTTHHHHHHHHTTTCCCEEEES
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHHcCCcEEEEC-CCchHHHHHHHHccCCccEEEEC
Confidence 345789999983 678888777642 2233332 24556678888776433321 111110 112349999843
Q ss_pred cccccchhhhHHHHHHHHHhC-CCCeEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLL-RPGGYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvL-kPGG~lvis~ 317 (522)
-. ....+....+.| |+||+++...
T Consensus 239 ~g-------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 239 IT-------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp SC-------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred CC-------chHHHHHHHHHhhcCCCEEEEEe
Confidence 21 124677888888 6999998755
No 382
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=44.97 E-value=16 Score=37.70 Aligned_cols=93 Identities=12% Similarity=0.029 Sum_probs=56.7
Q ss_pred CCCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC-----------------
Q 009946 214 GNIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP----------------- 274 (522)
Q Consensus 214 ~~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp----------------- 274 (522)
....+||=+|+ |.|.++..++... +..+...+.++..++.+++.|....+...+. ++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRALGCDLVINRAEL-GITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCCCEEEHHHH-TCCTTGGGCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCCEEEecccc-cccccccccccccchhhhHH
Confidence 34578999997 3456666666541 3333344457777788888776544332111 110
Q ss_pred ------CCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 275 ------YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 275 ------f~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.....+|+|+-... ...+....++|++||.+++..
T Consensus 296 ~~~v~~~~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 296 AKLVVEKAGREPDIVFEHTG--------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHSSCCSEEEECSC--------HHHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHhCCCceEEEECCC--------chHHHHHHHHHhcCCEEEEEe
Confidence 00246899984431 135778889999999999865
No 383
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=44.90 E-value=36 Score=33.43 Aligned_cols=96 Identities=15% Similarity=0.062 Sum_probs=57.2
Q ss_pred CCCCeEEEECCCC-chHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC------CCCCCceEEEec
Q 009946 214 GNIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCS 286 (522)
Q Consensus 214 ~~~~~VLDIGCGt-G~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp------f~d~sFDlVv~s 286 (522)
....+||=+|+|. |.++..++...- +-.+...+.++...+.+++.|....+...+ .+.+ .....+|+|+..
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~-~~~~~~~~~~~~~~g~d~v~d~ 236 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKSFGAMQTFNSSE-MSAPQMQSVLRELRFNQLILET 236 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTTCSEEEETTT-SCHHHHHHHHGGGCSSEEEEEC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHHcCCeEEEeCCC-CCHHHHHHhhcccCCccccccc
Confidence 3457899999874 455555554311 112233466778888899888654443211 1110 112457888743
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEeC
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~P 318 (522)
.. ....+....++|++||.+++...
T Consensus 237 ~G-------~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 237 AG-------VPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp SC-------SHHHHHHHHHHCCTTCEEEECCC
T ss_pred cc-------ccchhhhhhheecCCeEEEEEec
Confidence 21 13467888899999999998653
No 384
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=44.39 E-value=18 Score=36.20 Aligned_cols=93 Identities=9% Similarity=0.024 Sum_probs=57.5
Q ss_pred CCCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC-----CCCCCceEEEec
Q 009946 214 GNIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YPSRSFELAHCS 286 (522)
Q Consensus 214 ~~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp-----f~d~sFDlVv~s 286 (522)
....+||-+|+ |.|..+..++.. .+..+...+.++...+.+++.|....+.. ...++. ...+.+|+|+.+
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~-~~~~~~~~~~~~~~~g~Dvvid~ 242 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARA--FGAEVYATAGSTGKCEACERLGAKRGINY-RSEDFAAVIKAETGQGVDIILDM 242 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHTCSEEEET-TTSCHHHHHHHHHSSCEEEEEES
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhcCCCEEEeC-CchHHHHHHHHHhCCCceEEEEC
Confidence 34578999953 356666666654 24456666777788888888776543321 111110 002469999854
Q ss_pred cccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.. . ..+....+.|++||.+++..
T Consensus 243 ~g-~-------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 243 IG-A-------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp CC-G-------GGHHHHHHTEEEEEEEEECC
T ss_pred CC-H-------HHHHHHHHHhccCCEEEEEE
Confidence 32 1 25677889999999999765
No 385
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=44.07 E-value=6.5 Score=39.70 Aligned_cols=94 Identities=15% Similarity=0.099 Sum_probs=49.5
Q ss_pred CCCeEEEECCC-CchHHHHHhhCCCcccccCcccccHHHHHHHH-HcCCCeEEEEeCCCCCCCCCCCceEEEeccccccc
Q 009946 215 NIRNVLDVGCG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFAL-ERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 215 ~~~~VLDIGCG-tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~-~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~ 292 (522)
...+||=+|+| .|.++..++.. .+..+...+.++...+.++ +.|....+...+...+.-..+.+|+|+.... ..
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g-~~- 262 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKA--FGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVS-AV- 262 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCS-SC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCC-cH-
Confidence 34689999975 24555555543 1334444455555555655 4454322211110001000136999985432 11
Q ss_pred hhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 293 LQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
..+....++|++||+++...
T Consensus 263 -----~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 263 -----HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp -----CCSHHHHHHEEEEEEEEECC
T ss_pred -----HHHHHHHHHHhcCCEEEEEc
Confidence 13456778899999998765
No 386
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=42.59 E-value=2.5e+02 Score=28.03 Aligned_cols=101 Identities=10% Similarity=0.059 Sum_probs=55.3
Q ss_pred CCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHH---HHHH------------------------cCCCeEEEEe
Q 009946 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQ---FALE------------------------RGIPSTLGVL 268 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~---~A~~------------------------rg~~~~~~~~ 268 (522)
...|+-+|||.=.....|.......+.+...|..+.+.. ...+ ...+..++-.
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~ 170 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGA 170 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEEC
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEcc
Confidence 467999999998888888653111233333344332221 1111 0223456666
Q ss_pred CCCCC----------CCCCCCceEEEeccccccchhhh--HHHHHHHHHhCCCCeEEEEEeC
Q 009946 269 GTKRL----------PYPSRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 269 d~~~l----------pf~d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvis~P 318 (522)
|+.++ .+.... -.++.+.+++.|++.. ..+|+.+.+... +|.+++..+
T Consensus 171 DL~d~~~l~~~L~~~g~d~~~-Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~ 230 (334)
T 3iei_A 171 DLRDLSELEEKLKKCNMNTQL-PTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQ 230 (334)
T ss_dssp CTTCHHHHHHHHHHTTCCTTS-CEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEE
T ss_pred ccccchhHHHHHHhcCCCCCC-CEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEec
Confidence 66542 122222 3444466678887544 568888887764 555555443
No 387
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=41.62 E-value=17 Score=35.69 Aligned_cols=91 Identities=14% Similarity=0.080 Sum_probs=52.9
Q ss_pred CCCeEEEEC-CC-CchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCC-CCCCCCCceEEEecccccc
Q 009946 215 NIRNVLDVG-CG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR-LPYPSRSFELAHCSRCRID 291 (522)
Q Consensus 215 ~~~~VLDIG-CG-tG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~-lpf~d~sFDlVv~s~~~l~ 291 (522)
...+||=+| +| .|.++..++... +..+.... +....+.+++.|....+.. ...+ +.-.-+.+|+|+-...
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~~~lGa~~~i~~-~~~~~~~~~~~g~D~v~d~~g--- 224 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFLKALGAEQCINY-HEEDFLLAISTPVDAVIDLVG--- 224 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHHHHHTCSEEEET-TTSCHHHHCCSCEEEEEESSC---
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHHHHcCCCEEEeC-CCcchhhhhccCCCEEEECCC---
Confidence 457899886 44 567777777542 33333333 3444677888776543321 1111 1111146999984321
Q ss_pred chhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 292 WLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
...+....++|++||+++...
T Consensus 225 -----~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 225 -----GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp -----HHHHHHHGGGEEEEEEEEECC
T ss_pred -----cHHHHHHHHhccCCCEEEEeC
Confidence 123478889999999999754
No 388
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=39.19 E-value=18 Score=35.72 Aligned_cols=61 Identities=20% Similarity=0.192 Sum_probs=35.2
Q ss_pred CCCceEEEeccc---cccch---hhh----HHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcC
Q 009946 277 SRSFELAHCSRC---RIDWL---QRD----GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC 342 (522)
Q Consensus 277 d~sFDlVv~s~~---~l~~~---~d~----~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g 342 (522)
-+.||+|+++.. ..||- +|- ..+-...-+.|+|||.+++..=... +...-.-+..++++.-
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyA-----DR~SE~vV~alARkF~ 279 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYA-----DRTSERVICVLGRKFR 279 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCC-----SHHHHHHHHHHHTTEE
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeeccc-----ccchHHHHHHHHhhhe
Confidence 378999998531 22332 121 2345567789999999998763322 1112234566666643
No 389
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=38.04 E-value=2.5e+02 Score=32.55 Aligned_cols=131 Identities=15% Similarity=0.086 Sum_probs=72.3
Q ss_pred CCCeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCC-----------------CCCCCC
Q 009946 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTK-----------------RLPYPS 277 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~-----------------~lpf~d 277 (522)
..-+++|+=||.|.++.-|....+. --+.+.|+.+.+.+.-+.+.....+...|+. .+|. .
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~-~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~-~ 616 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGIS-DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQ-K 616 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSE-EEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCC-T
T ss_pred CCCeEEEeccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhccc-C
Confidence 3468999999999999888766321 1234556666666655555555555544421 1222 2
Q ss_pred CCceEEEecc-----ccccc-----hhhh-HHH---HHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCc
Q 009946 278 RSFELAHCSR-----CRIDW-----LQRD-GIL---LLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 343 (522)
Q Consensus 278 ~sFDlVv~s~-----~~l~~-----~~d~-~~~---L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~ 343 (522)
+.+|+|+.+. +...- ..+. ..+ +.++.+.++|--.++=-++..... .....+..+...++.+||
T Consensus 617 ~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~llENV~glls~--~~~~~~~~i~~~L~~lGY 694 (1002)
T 3swr_A 617 GDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSF--KRSMVLKLTLRCLVRMGY 694 (1002)
T ss_dssp TTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEEEEEEEGGGGTT--GGGHHHHHHHHHHHHHTC
T ss_pred CCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEEEEeccHHHhcc--CcchHHHHHHHHHHhcCC
Confidence 4689998642 11111 0111 112 334555668864444333333211 122457778888899999
Q ss_pred EEEEEe
Q 009946 344 KIVSKK 349 (522)
Q Consensus 344 ~~v~~~ 349 (522)
.+....
T Consensus 695 ~v~~~v 700 (1002)
T 3swr_A 695 QCTFGV 700 (1002)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 876543
No 390
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=37.45 E-value=24 Score=35.34 Aligned_cols=88 Identities=16% Similarity=0.098 Sum_probs=50.8
Q ss_pred CCeEEEECCC-CchHHHHHhhCCCcccccCcccccH---HHHHHHHHcCCCeEEEEeCCCCCCCCC------CCceEEEe
Q 009946 216 IRNVLDVGCG-VASFGAYLLSHDIIAMSLAPNDVHE---NQIQFALERGIPSTLGVLGTKRLPYPS------RSFELAHC 285 (522)
Q Consensus 216 ~~~VLDIGCG-tG~~a~~La~~~v~gvdis~~Dis~---a~i~~A~~rg~~~~~~~~d~~~lpf~d------~sFDlVv~ 285 (522)
..+||-+|+| .|.++..++.. .+..+...+.++ ...+.+++.|.... + .+ .+.+ +.+|+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v----~-~~-~~~~~~~~~~~~~d~vid 252 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT--YGLEVWMANRREPTEVEQTVIEETKTNYY----N-SS-NGYDKLKDSVGKFDVIID 252 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH--HTCEEEEEESSCCCHHHHHHHHHHTCEEE----E-CT-TCSHHHHHHHCCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCccchHHHHHHHHhCCcee----c-hH-HHHHHHHHhCCCCCEEEE
Confidence 5789999983 23444444432 122343444444 55577777665322 2 22 2211 46999985
Q ss_pred ccccccchhhhHHHH-HHHHHhCCCCeEEEEEeC
Q 009946 286 SRCRIDWLQRDGILL-LELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 286 s~~~l~~~~d~~~~L-~ei~RvLkPGG~lvis~P 318 (522)
... .. ..+ ..+.++|++||.+++...
T Consensus 253 ~~g-~~------~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 253 ATG-AD------VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCC-CC------THHHHHHGGGEEEEEEEEECSC
T ss_pred CCC-Ch------HHHHHHHHHHHhcCCEEEEEec
Confidence 432 11 245 888899999999998653
No 391
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=36.18 E-value=36 Score=35.05 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=23.8
Q ss_pred CCCCeEEEECCCCchHHHHHh-h-----CCCcccccCcc
Q 009946 214 GNIRNVLDVGCGVASFGAYLL-S-----HDIIAMSLAPN 246 (522)
Q Consensus 214 ~~~~~VLDIGCGtG~~a~~La-~-----~~v~gvdis~~ 246 (522)
.+...++|||++.|.++..++ . ..|.+++..+.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~ 263 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRI 263 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHH
Confidence 456789999999999998876 2 23555555553
No 392
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=35.54 E-value=2e+02 Score=24.10 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=51.8
Q ss_pred CeEEEECCCC-c-hHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC----CCCCCceEEEeccccc
Q 009946 217 RNVLDVGCGV-A-SFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP----YPSRSFELAHCSRCRI 290 (522)
Q Consensus 217 ~~VLDIGCGt-G-~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp----f~d~sFDlVv~s~~~l 290 (522)
.+|+=+|||. | .++..|.+. +.++...|.++..++.+++.+. .+..+|..+.. ..-..+|+|++...
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~---g~~v~vid~~~~~~~~~~~~g~--~~i~gd~~~~~~l~~a~i~~ad~vi~~~~-- 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS---DIPLVVIETSRTRVDELRERGV--RAVLGNAANEEIMQLAHLECAKWLILTIP-- 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCEEEEESCHHHHHHHHHTTC--EEEESCTTSHHHHHHTTGGGCSEEEECCS--
T ss_pred CCEEEECcCHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHcCC--CEEECCCCCHHHHHhcCcccCCEEEEECC--
Confidence 4688899864 3 223333333 4455566777777777776554 44556643321 11246898885431
Q ss_pred cchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 291 DWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ......+....|.+.|+..++...
T Consensus 81 ~--~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 81 N--GYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp C--HHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred C--hHHHHHHHHHHHHHCCCCeEEEEE
Confidence 1 111223455677788888877654
No 393
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=35.48 E-value=87 Score=30.99 Aligned_cols=95 Identities=15% Similarity=0.021 Sum_probs=50.4
Q ss_pred CCCeEEEECC--CCchHHHHHhhC-CCcccccCccc-ccHHHHHHHHHcCCCeEEEEe-----CCCCCCCCCCCceEEEe
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSH-DIIAMSLAPND-VHENQIQFALERGIPSTLGVL-----GTKRLPYPSRSFELAHC 285 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~-~v~gvdis~~D-is~a~i~~A~~rg~~~~~~~~-----d~~~lpf~d~sFDlVv~ 285 (522)
...+||=+|+ |.|.++..+++. ....+-+...+ -.+...+.+++.|....+... +..++.-..+.+|+|+-
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid 246 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALN 246 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEE
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEE
Confidence 4578999997 467777777754 11111111111 122345667777765433211 11111111114899884
Q ss_pred ccccccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
... . ..+.+..++|++||++++..
T Consensus 247 ~~g------~--~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 247 CVG------G--KSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSC------H--HHHHHHHTTSCTTCEEEECC
T ss_pred CCC------c--HHHHHHHHhhCCCCEEEEEe
Confidence 321 1 12345789999999999864
No 394
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=34.44 E-value=46 Score=33.12 Aligned_cols=58 Identities=22% Similarity=0.135 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhcCCCcccCCCCCCCeEEEECCCCchHHHHHh--hCCCcccccCcccccHHHHHHHHHcC
Q 009946 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLL--SHDIIAMSLAPNDVHENQIQFALERG 260 (522)
Q Consensus 192 a~~y~~~l~~lL~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La--~~~v~gvdis~~Dis~a~i~~A~~rg 260 (522)
....++.+.+... .....|||.-||+|+.+.... .+..+++++.+. -....+.+++|-
T Consensus 228 p~~l~~~~i~~~~---------~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~--~~~~~~~~~~Rl 287 (319)
T 1eg2_A 228 PAAVIERLVRALS---------HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPV--FKEYYQKQLTFL 287 (319)
T ss_dssp CHHHHHHHHHHHS---------CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTH--HHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhC---------CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCcc--HHHHHHHHHHHH
Confidence 3445555555443 234679999999998776654 455556654431 015667777763
No 395
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=33.92 E-value=1.6e+02 Score=24.37 Aligned_cols=56 Identities=14% Similarity=0.183 Sum_probs=33.3
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEecc
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSR 287 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~ 287 (522)
.+||=+ ||+|.-+..|+.. .+.+.+.+.+..+.+...+..+++-....+|+|++..
T Consensus 22 kkIlvv-C~sG~gTS~ll~~--------------kl~~~~~~~gi~~~V~~~~~~~~~~~~~~~DlIist~ 77 (113)
T 1tvm_A 22 RKIIVA-CGGAVATSTMAAE--------------EIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTA 77 (113)
T ss_dssp EEEEEE-SCSCSSHHHHHHH--------------HHHHHHHHTTCCEEEEEECTTTTTTSTTSCSEEEESS
T ss_pred cEEEEE-CCCCHHHHHHHHH--------------HHHHHHHHcCCeEEEEEecHHHHhhccCCCCEEEECC
Confidence 445544 8888555544321 2334556677777666667666653334689998754
No 396
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=30.72 E-value=50 Score=35.85 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=39.0
Q ss_pred CCCCCCCceEEEeccc---cccc-hh--h----hHHHHHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcC
Q 009946 273 LPYPSRSFELAHCSRC---RIDW-LQ--R----DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC 342 (522)
Q Consensus 273 lpf~d~sFDlVv~s~~---~l~~-~~--d----~~~~L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g 342 (522)
+|- ++.||+|+++.. ..|| .. | ...+-...-+.|+|||.+++..=... +...-.-+..++++..
T Consensus 216 ~p~-~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyA-----Dr~sE~vv~alaRkF~ 289 (670)
T 4gua_A 216 FPP-QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYA-----DRNSEDVVTALARKFV 289 (670)
T ss_dssp CCC-CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC-----SHHHHHHHHHHHHTEE
T ss_pred CCC-CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeecc-----ccchHHHHHHHHhhee
Confidence 443 368999998531 2233 21 1 13355677899999999998763222 1111234666777755
Q ss_pred cEEE
Q 009946 343 WKIV 346 (522)
Q Consensus 343 ~~~v 346 (522)
+.-+
T Consensus 290 ~~rv 293 (670)
T 4gua_A 290 RVSA 293 (670)
T ss_dssp EEEE
T ss_pred eeee
Confidence 4433
No 397
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=28.01 E-value=2e+02 Score=26.77 Aligned_cols=65 Identities=8% Similarity=-0.075 Sum_probs=35.6
Q ss_pred CeEEEECCCCchHHHHHhhCC-CcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEecc
Q 009946 217 RNVLDVGCGVASFGAYLLSHD-IIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSR 287 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~-v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~ 287 (522)
.+||=+|+ |.++..+++.- -.+.++...+-+......... ..+.+..+|..++. -..+|.|+...
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~d~~--~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--SGAEPLLWPGEEPS--LDGVTHLLIST 71 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--TTEEEEESSSSCCC--CTTCCEEEECC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--CCCeEEEecccccc--cCCCCEEEECC
Confidence 57999994 88777765420 002222222222222222222 35778888887766 35689988544
No 398
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=27.98 E-value=75 Score=32.79 Aligned_cols=21 Identities=19% Similarity=0.123 Sum_probs=17.6
Q ss_pred CCeEEEECCCCchHHHHHhhC
Q 009946 216 IRNVLDVGCGVASFGAYLLSH 236 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~ 236 (522)
.-+|||+-||.|.+...|.+.
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~a 30 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNI 30 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHH
T ss_pred cceEEEEecCcCHHHHHHHHh
Confidence 357999999999988888764
No 399
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=27.75 E-value=78 Score=23.88 Aligned_cols=28 Identities=11% Similarity=0.137 Sum_probs=22.9
Q ss_pred HHHHHHHHHhcCcEEEEEecceEEEecc
Q 009946 331 WNAMYDLLKSMCWKIVSKKDQTVIWAKP 358 (522)
Q Consensus 331 ~~~l~~l~~~~g~~~v~~~~~~~iw~Kp 358 (522)
+.++.+++++.||..++..+.-.+|.+|
T Consensus 7 ~~elik~L~~~G~~~~r~~GSH~~~~~~ 34 (70)
T 1whz_A 7 PEEVARKLRRLGFVERMAKGGHRLYTHP 34 (70)
T ss_dssp HHHHHHHHHHTTCEEEEEETTEEEEECT
T ss_pred HHHHHHHHHHCCCEEeCCCCCCceEecC
Confidence 6789999999999998877777777544
No 400
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=27.37 E-value=1.3e+02 Score=25.07 Aligned_cols=79 Identities=11% Similarity=-0.040 Sum_probs=46.7
Q ss_pred CeEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchhhh
Q 009946 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD 296 (522)
Q Consensus 217 ~~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d~ 296 (522)
.+||=+ |+.|..+..|+++ +.+.|+++|.++.+.......+.-....||+|+..- -+.|
T Consensus 7 mkIlL~-C~aGmSTsllv~k---------------m~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgP-QV~y---- 65 (108)
T 3nbm_A 7 LKVLVL-CAGSGTSAQLANA---------------INEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAP-QVRS---- 65 (108)
T ss_dssp EEEEEE-ESSSSHHHHHHHH---------------HHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECG-GGGG----
T ss_pred ceEEEE-CCCCCCHHHHHHH---------------HHHHHHHCCCceEEEEcchHHHHhhccCCCEEEECh-HHHH----
Confidence 456644 6666555555543 456678889888776544444432234599999654 2222
Q ss_pred HHHHHHHHHhCCCCeEEEEEeC
Q 009946 297 GILLLELDRLLRPGGYFVYSSP 318 (522)
Q Consensus 297 ~~~L~ei~RvLkPGG~lvis~P 318 (522)
.+.++.+...+-|.=+...+
T Consensus 66 --~~~~ik~~~~~~~ipV~vI~ 85 (108)
T 3nbm_A 66 --YYREMKVDAERLGIQIVATR 85 (108)
T ss_dssp --GHHHHHHHHTTTTCEEEECC
T ss_pred --HHHHHHHHhhhcCCcEEEeC
Confidence 45666666777666555443
No 401
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=25.62 E-value=12 Score=38.17 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=49.7
Q ss_pred CCCeEEEECCCCchHHHHHhhC-CCcccccCcccccHHHHHHHHH-cCCCeEEEEeCCCCCCCCCCCceEEEeccccccc
Q 009946 215 NIRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALE-RGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (522)
Q Consensus 215 ~~~~VLDIGCGtG~~a~~La~~-~v~gvdis~~Dis~a~i~~A~~-rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~ 292 (522)
.+.+|+=+|+| .++..+++. .-.++++...|.++...+.+++ .+........+...+.-.-..+|+|+.... ...
T Consensus 167 ~g~~V~ViG~G--~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~-~p~ 243 (377)
T 2vhw_A 167 EPADVVVIGAG--TAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVL-VPG 243 (377)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCC-CTT
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCC-cCC
Confidence 35789999985 344333321 0124456666777766666655 344432221111111100024799985321 111
Q ss_pred hhhhHHHHHHHHHhCCCCeEEEEE
Q 009946 293 LQRDGILLLELDRLLRPGGYFVYS 316 (522)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvis 316 (522)
...+..+..+..+.+||||.++..
T Consensus 244 ~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 244 AKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp SCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred CCCcceecHHHHhcCCCCcEEEEE
Confidence 111112346677889999998863
No 402
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=25.42 E-value=2.5e+02 Score=29.12 Aligned_cols=91 Identities=16% Similarity=0.229 Sum_probs=49.8
Q ss_pred CCCeEEEECCCC-c-hHHHHHhhCCCcccccCcccccHHHHHHHHH-----------cCC-------C--eEEEEeCCCC
Q 009946 215 NIRNVLDVGCGV-A-SFGAYLLSHDIIAMSLAPNDVHENQIQFALE-----------RGI-------P--STLGVLGTKR 272 (522)
Q Consensus 215 ~~~~VLDIGCGt-G-~~a~~La~~~v~gvdis~~Dis~a~i~~A~~-----------rg~-------~--~~~~~~d~~~ 272 (522)
...+|.=||+|. | .++..++.+ +.++...|.++..++.+++ ++. . ..+ ..+.+.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~---G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~ 111 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARV---GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE 111 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH
Confidence 346799999986 3 455556655 3444555555555444332 110 1 122 222221
Q ss_pred CCCCCCCceEEEeccccccchhhhHHHHHHHHHhCCCCeEEEE
Q 009946 273 LPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVY 315 (522)
Q Consensus 273 lpf~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi 315 (522)
-...|+|+.+- .+...-...++.++...++|+..++.
T Consensus 112 ----~~~aDlVIeaV--pe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 ----LSTVDLVVEAV--FEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp ----GTTCSEEEECC--CSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ----HCCCCEEEEcC--CCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 13579998543 32222225688899999998876654
No 403
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=25.06 E-value=2.4e+02 Score=27.53 Aligned_cols=91 Identities=20% Similarity=0.202 Sum_probs=53.9
Q ss_pred CCeEEEECCCC--chHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccch
Q 009946 216 IRNVLDVGCGV--ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (522)
Q Consensus 216 ~~~VLDIGCGt--G~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~ 293 (522)
..+|.=||+|. +.++..|..... ..++...|.++..++.+.+.|..... ..+..++ .-...|+|+.+-- .
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~dr~~~~~~~a~~~G~~~~~-~~~~~~~--~~~~aDvVilavp-~--- 104 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINPESISKAVDLGIIDEG-TTSIAKV--EDFSPDFVMLSSP-V--- 104 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHHHHTTSCSEE-ESCTTGG--GGGCCSEEEECSC-G---
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHCCCcchh-cCCHHHH--hhccCCEEEEeCC-H---
Confidence 36799999873 245555655522 12566667777777777777653222 1222220 1135799985431 1
Q ss_pred hhhHHHHHHHHHhCCCCeEEE
Q 009946 294 QRDGILLLELDRLLRPGGYFV 314 (522)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lv 314 (522)
.....++.++...|++|..++
T Consensus 105 ~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 105 RTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp GGHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHHhhccCCCcEEE
Confidence 223568899999999987654
No 404
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=25.05 E-value=36 Score=34.10 Aligned_cols=93 Identities=11% Similarity=0.074 Sum_probs=51.4
Q ss_pred CCCeEEEECC--CCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC---CCCCCceEEEecccc
Q 009946 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP---YPSRSFELAHCSRCR 289 (522)
Q Consensus 215 ~~~~VLDIGC--GtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp---f~d~sFDlVv~s~~~ 289 (522)
...+||=+|+ |.|.++..++... +..+...+ ++...+.+++.|....+.. ...++. .....+|+|+-...
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~-~~~~~~~~~~~~~g~D~vid~~g- 257 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELVRKLGADDVIDY-KSGSVEEQLKSLKPFDFILDNVG- 257 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHHTTCSEEEET-TSSCHHHHHHTSCCBSEEEESSC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHHHHcCCCEEEEC-CchHHHHHHhhcCCCCEEEECCC-
Confidence 4578999993 3567777776541 22333333 3344566777665433321 111110 01146999984431
Q ss_pred ccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 290 IDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
.....+....++|++||+++...
T Consensus 258 -----~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 258 -----GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp -----TTHHHHGGGGBCSSSCCEEEESC
T ss_pred -----ChhhhhHHHHHhhcCCcEEEEeC
Confidence 11134567778999999998765
No 405
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=22.00 E-value=7.9e+02 Score=26.95 Aligned_cols=49 Identities=8% Similarity=0.049 Sum_probs=28.4
Q ss_pred HHHHHHhCCCCeEEEEEeCCCCCCChhHHHHHHHHHHHHHhcCcEEEEEec
Q 009946 300 LLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (522)
Q Consensus 300 L~ei~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g~~~v~~~~ 350 (522)
+.++.+.+||--.++=-++.... ......|+.+...+..+||.+....-
T Consensus 416 ~~riv~~~rPk~fvlENV~glls--~~~g~~~~~il~~l~~lGY~v~~~vL 464 (784)
T 4ft4_B 416 FMDIVAYLKPKYVLMENVVDILK--FADGYLGKYALSCLVAMKYQARLGMM 464 (784)
T ss_dssp HHHHHHHHCCSEEEEEEEGGGGT--GGGGHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEecCCccc--cccchHHHHHHHHHHhCCCeeeeeec
Confidence 33455667896444322233221 22335677888888999998765543
No 406
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=21.59 E-value=41 Score=27.88 Aligned_cols=54 Identities=7% Similarity=0.022 Sum_probs=36.4
Q ss_pred eEEEECCCCchHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEecc
Q 009946 218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSR 287 (522)
Q Consensus 218 ~VLDIGCGtG~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~ 287 (522)
+|| +-||.|.-+..+++ .+.+.++++|.++.+...+..++.-....+|+|+.+.
T Consensus 5 kIl-l~Cg~G~sTS~l~~---------------k~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~p 58 (106)
T 1e2b_A 5 HIY-LFSSAGMSTSLLVS---------------KMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGP 58 (106)
T ss_dssp EEE-EECSSSTTTHHHHH---------------HHHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEECT
T ss_pred EEE-EECCCchhHHHHHH---------------HHHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEcc
Confidence 455 55888865554443 3456778889998888877776653224589998654
No 407
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.32 E-value=2.2e+02 Score=24.70 Aligned_cols=94 Identities=13% Similarity=-0.020 Sum_probs=48.3
Q ss_pred CCeEEEECCCC-ch-HHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCC----CC-CCCCceEEEeccc
Q 009946 216 IRNVLDVGCGV-AS-FGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL----PY-PSRSFELAHCSRC 288 (522)
Q Consensus 216 ~~~VLDIGCGt-G~-~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~l----pf-~d~sFDlVv~s~~ 288 (522)
..+|+=+|+|. |. ++..|... .+.++...|.++...+.+++.+.. ...+|..+. .. .-..+|+|+....
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~--~g~~V~vid~~~~~~~~~~~~g~~--~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRAR--YGKISLGIEIREEAAQQHRSEGRN--VISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHH--HCSCEEEEESCHHHHHHHHHTTCC--EEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc--cCCeEEEEECCHHHHHHHHHCCCC--EEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 35688888763 32 22333322 023444446666666666666544 334443221 11 1245898885431
Q ss_pred cccchhhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 289 RIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
. ......+....+.+.|++.++...
T Consensus 115 --~--~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 115 --H--HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp --S--HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred --C--hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 1 112233445667778888888754
No 408
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=21.03 E-value=41 Score=33.45 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=27.3
Q ss_pred CCceEEEecc----ccccch--hhh----HHHHHHHHHhCCCCeEEEEEe
Q 009946 278 RSFELAHCSR----CRIDWL--QRD----GILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 278 ~sFDlVv~s~----~~l~~~--~d~----~~~L~ei~RvLkPGG~lvis~ 317 (522)
+.+|+|++.. ..++|. .|- ..++.-+.++|+|||.|++-.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kv 254 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIG 254 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 5699999732 122323 333 236777889999999999876
No 409
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=20.76 E-value=19 Score=36.40 Aligned_cols=99 Identities=12% Similarity=0.090 Sum_probs=47.3
Q ss_pred CCeEEEECCCCchHHHHHhhC-CCcccccCcccccHHHHHHHHH-cCCCeEEEEeCCCCCCCCCCCceEEEeccccccch
Q 009946 216 IRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALE-RGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (522)
Q Consensus 216 ~~~VLDIGCGtG~~a~~La~~-~v~gvdis~~Dis~a~i~~A~~-rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~ 293 (522)
+.+|+=+|+| ..+..+++. .-.|.++...|.++...+.+.+ .+..+.....+...+.-.-..+|+|+..- .....
T Consensus 166 ~~~V~ViGaG--~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~-g~~~~ 242 (369)
T 2eez_A 166 PASVVILGGG--TVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAV-LVPGA 242 (369)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECC-C----
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECC-CCCcc
Confidence 4789999985 444333321 0113455555666666555554 34432222111111110002479988543 12110
Q ss_pred hhhHHHHHHHHHhCCCCeEEEEEe
Q 009946 294 QRDGILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvis~ 317 (522)
..+..+.+++.+.+|+||.++...
T Consensus 243 ~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 243 KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ---CCSCHHHHTTSCTTCEEEECC
T ss_pred ccchhHHHHHHHhhcCCCEEEEEe
Confidence 111113567778899999887643
No 410
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=20.33 E-value=3.1e+02 Score=25.53 Aligned_cols=85 Identities=18% Similarity=0.067 Sum_probs=47.4
Q ss_pred eEEEECCCC-c-hHHHHHhhCCCcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCceEEEeccccccchhh
Q 009946 218 NVLDVGCGV-A-SFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (522)
Q Consensus 218 ~VLDIGCGt-G-~~a~~La~~~v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lpf~d~sFDlVv~s~~~l~~~~d 295 (522)
+|.=||||. | .++..|... +.++...+.++...+.+.+.+..... ..+..+. ...|+|+..- -. ..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~----~~~D~vi~av--~~--~~ 69 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR---GHYLIGVSRQQSTCEKAVERQLVDEA-GQDLSLL----QTAKIIFLCT--PI--QL 69 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT---TCEEEEECSCHHHHHHHHHTTSCSEE-ESCGGGG----TTCSEEEECS--CH--HH
T ss_pred EEEEEcCcHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHhCCCCccc-cCCHHHh----CCCCEEEEEC--CH--HH
Confidence 467788774 2 344444444 23455556666666666665543221 1222222 3579998543 11 23
Q ss_pred hHHHHHHHHHhCCCCeEEE
Q 009946 296 DGILLLELDRLLRPGGYFV 314 (522)
Q Consensus 296 ~~~~L~ei~RvLkPGG~lv 314 (522)
...++.++...+++|..++
T Consensus 70 ~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 70 ILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHHHhhCCCCCEEE
Confidence 3567888888888887554
No 411
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=20.25 E-value=1.3e+02 Score=28.66 Aligned_cols=102 Identities=13% Similarity=0.031 Sum_probs=52.4
Q ss_pred CCeEEEECCCCc---hHHHHHhhCC--CcccccCcccccHHHHHHHHHcCCCeEEEEeCCCCCC-----CC-----CCCc
Q 009946 216 IRNVLDVGCGVA---SFGAYLLSHD--IIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YP-----SRSF 280 (522)
Q Consensus 216 ~~~VLDIGCGtG---~~a~~La~~~--v~gvdis~~Dis~a~i~~A~~rg~~~~~~~~d~~~lp-----f~-----d~sF 280 (522)
.+++|=.|++.| .++..|+++. |..++.......+...+...+.+..+.+...|+.+.. +. -+..
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 126 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSL 126 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 467999998766 3445555542 2222222211112222223334567777877765432 00 1357
Q ss_pred eEEEeccccccc---h-----hhh-----------HHHHHHHHHhCCCCeEEEEEe
Q 009946 281 ELAHCSRCRIDW---L-----QRD-----------GILLLELDRLLRPGGYFVYSS 317 (522)
Q Consensus 281 DlVv~s~~~l~~---~-----~d~-----------~~~L~ei~RvLkPGG~lvis~ 317 (522)
|+++.+-..... . ++. -.+++.+.+.++.+|.++.+.
T Consensus 127 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 888854321110 0 011 125566777788899888765
Done!