BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009948
(522 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255549190|ref|XP_002515649.1| 3-5 exonuclease, putative [Ricinus communis]
gi|223545192|gb|EEF46701.1| 3-5 exonuclease, putative [Ricinus communis]
Length = 523
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/527 (73%), Positives = 440/527 (83%), Gaps = 9/527 (1%)
Query: 1 MDCTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
MD + + PL IHLVT+T SPEFTHL +L++SS++GLDAEWKP R HQS FP V+LLQLA
Sbjct: 1 MDPSDQNPLTIHLVTTTNSPEFTHLTESLTRSSIIGLDAEWKPVRGHQSTFPTVALLQLA 60
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
CQ P+F +S ES +VFLLDLS I L SIW+LLKE+F SPDILKLGF+FKQDL+YLS
Sbjct: 61 CQLRPQFGSDSAES---LVFLLDLSLIRLSSIWKLLKEVFASPDILKLGFRFKQDLVYLS 117
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKEL 180
STFCSQGCD GF +VEPYLDITSIY+ L HKQ GRK+PKETKSLA IC E+L ISLSKEL
Sbjct: 118 STFCSQGCDPGFHKVEPYLDITSIYHFLQHKQRGRKIPKETKSLATICNEVLGISLSKEL 177
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNL-DLGLK 239
QCSDWS+RPLTEEQK YAAIDAHCL+EIFN+F+ V+++G +++ EL SSN+ GLK
Sbjct: 178 QCSDWSHRPLTEEQKAYAAIDAHCLLEIFNVFRANVSKEGEFYNNVMELQSSNIISHGLK 237
Query: 240 GILEKPDIGNKTVRFKLCEALDIIRAT--SYYSQCLPEG--VVSRVSYLNTMPMDESLVK 295
ILE+ D G+ +R + EAL+II+AT S S + G VVS S +NT+PMDE L+
Sbjct: 238 EILERFDAGDALIRTRFSEALNIIQATVASEDSHRIARGERVVSITSSINTLPMDELLLN 297
Query: 296 IVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDG 355
IVR++GEKI+L E D+ PK +KKG+KRSS IV REK L +I DWQGPPPWD SLGGDG
Sbjct: 298 IVRRFGEKIVLGESDRKPKAFRKKGKKRSS-IVTCREKLLGNICDWQGPPPWDFSLGGDG 356
Query: 356 YPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQY 415
PKFLCDVMVEGLAKHLRCVGIDAA P SKKPE RELIDQ KE RVLLTRDAKLLR QY
Sbjct: 357 CPKFLCDVMVEGLAKHLRCVGIDAAIPYSKKPESRELIDQARKEHRVLLTRDAKLLRFQY 416
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
LIKNQIYRVKSLLKN+QLLEVIE F+L+ISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK
Sbjct: 417 LIKNQIYRVKSLLKNEQLLEVIETFKLQISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 476
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
GFQ+IPDCLF+KNL+FWQCMDCNQLYWEGTQY NAVQKFID+CKLNE
Sbjct: 477 GFQKIPDCLFNKNLEFWQCMDCNQLYWEGTQYQNAVQKFIDICKLNE 523
>gi|359490814|ref|XP_002271858.2| PREDICTED: probable exonuclease mut-7 homolog [Vitis vinifera]
Length = 513
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/516 (73%), Positives = 435/516 (84%), Gaps = 9/516 (1%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+IHLV S +SPEFT L ++L+QSSL+GLDAEWKP R+ QS+FP VSLLQLACQ GPR P
Sbjct: 4 EIHLVASIDSPEFTLLTQSLTQSSLIGLDAEWKPIRTQQSSFPTVSLLQLACQLGPRLGP 63
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
+S +S +VFLLDLS+I L SI+ELL+++FVSPD+LKLGF+FKQDLIYLSSTFCSQGCD
Sbjct: 64 DSAKS---LVFLLDLSAISLSSIYELLRDVFVSPDVLKLGFRFKQDLIYLSSTFCSQGCD 120
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
GFDRVEP+LDITSIYN+L HK LGR++PKETKSLA+ICKELL ISLSKELQCSDWS+RP
Sbjct: 121 PGFDRVEPFLDITSIYNYLQHKSLGRRIPKETKSLASICKELLGISLSKELQCSDWSHRP 180
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGN 249
LTEEQK YAA DAHCL+EIFNIF KVA+KGNS S +E SN+D GLK ILE PDI +
Sbjct: 181 LTEEQKTYAATDAHCLLEIFNIFHFKVAEKGNSFCSATEQRFSNVDCGLKQILENPDICH 240
Query: 250 KTVRFKLCEALDIIRAT-SYYSQ--CLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILL 306
K +R K +A+DI+RAT S + Q E VVS S NT+PMD+SL IVRKYGE+ILL
Sbjct: 241 KLLRSKFFDAVDIVRATTSEFPQRKATLEEVVSWSSCRNTIPMDDSLFSIVRKYGERILL 300
Query: 307 RECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVE 366
+E D+ PKT KK ++ S+V +EK+++ +W PPPWDL+LGGDG PKFLCDVMVE
Sbjct: 301 KESDRKPKTKKKGKKQSSAV---CKEKQIEIFDEWCSPPPWDLTLGGDGCPKFLCDVMVE 357
Query: 367 GLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKS 426
GLAKHLRCVGIDAA P SKKPE RELIDQ KE RVLLTRD+KLLRH+YLIKNQIYRVK+
Sbjct: 358 GLAKHLRCVGIDAAIPYSKKPESRELIDQARKENRVLLTRDSKLLRHEYLIKNQIYRVKN 417
Query: 427 LLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFD 486
LLKN+QLLEVIE FQLKI EDQLMSRCTKCNGRFIQKPL+ EEA EAAKGFQ IP+CLFD
Sbjct: 418 LLKNEQLLEVIETFQLKICEDQLMSRCTKCNGRFIQKPLTAEEASEAAKGFQVIPNCLFD 477
Query: 487 KNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
NL+FWQCMDCNQLYWEGTQYHNAVQKFI+VCKLNE
Sbjct: 478 SNLEFWQCMDCNQLYWEGTQYHNAVQKFINVCKLNE 513
>gi|302143936|emb|CBI23041.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/529 (71%), Positives = 435/529 (82%), Gaps = 22/529 (4%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+IHLV S +SPEFT L ++L+QSSL+GLDAEWKP R+ QS+FP VSLLQLACQ GPR P
Sbjct: 4 EIHLVASIDSPEFTLLTQSLTQSSLIGLDAEWKPIRTQQSSFPTVSLLQLACQLGPRLGP 63
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
+S +S +VFLLDLS+I L SI+ELL+++FVSPD+LKLGF+FKQDLIYLSSTFCSQGCD
Sbjct: 64 DSAKS---LVFLLDLSAISLSSIYELLRDVFVSPDVLKLGFRFKQDLIYLSSTFCSQGCD 120
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
GFDRVEP+LDITSIYN+L HK LGR++PKETKSLA+ICKELL ISLSKELQCSDWS+RP
Sbjct: 121 PGFDRVEPFLDITSIYNYLQHKSLGRRIPKETKSLASICKELLGISLSKELQCSDWSHRP 180
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG-------------NSCSSISELDSSNLDL 236
LTEEQK YAA DAHCL+EIFNIF KVA+KG NS S +E SN+D
Sbjct: 181 LTEEQKTYAATDAHCLLEIFNIFHFKVAEKGYVGSCNLRRSSKGNSFCSATEQRFSNVDC 240
Query: 237 GLKGILEKPDIGNKTVRFKLCEALDIIRAT-SYYSQ--CLPEGVVSRVSYLNTMPMDESL 293
GLK ILE PDI +K +R K +A+DI+RAT S + Q E VVS S NT+PMD+SL
Sbjct: 241 GLKQILENPDICHKLLRSKFFDAVDIVRATTSEFPQRKATLEEVVSWSSCRNTIPMDDSL 300
Query: 294 VKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGG 353
IVRKYGE+ILL+E D+ PKT KK ++ S+V +EK+++ +W PPPWDL+LGG
Sbjct: 301 FSIVRKYGERILLKESDRKPKTKKKGKKQSSAV---CKEKQIEIFDEWCSPPPWDLTLGG 357
Query: 354 DGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
DG PKFLCDVMVEGLAKHLRCVGIDAA P SKKPE RELIDQ KE RVLLTRD+KLLRH
Sbjct: 358 DGCPKFLCDVMVEGLAKHLRCVGIDAAIPYSKKPESRELIDQARKENRVLLTRDSKLLRH 417
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+YLIKNQIYRVK+LLKN+QLLEVIE FQLKI EDQLMSRCTKCNGRFIQKPL+ EEA EA
Sbjct: 418 EYLIKNQIYRVKNLLKNEQLLEVIETFQLKICEDQLMSRCTKCNGRFIQKPLTAEEASEA 477
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
AKGFQ IP+CLFD NL+FWQCMDCNQLYWEGTQYHNAVQKFI+VCKLNE
Sbjct: 478 AKGFQVIPNCLFDSNLEFWQCMDCNQLYWEGTQYHNAVQKFINVCKLNE 526
>gi|297808445|ref|XP_002872106.1| hypothetical protein ARALYDRAFT_489298 [Arabidopsis lyrata subsp.
lyrata]
gi|297317943|gb|EFH48365.1| hypothetical protein ARALYDRAFT_489298 [Arabidopsis lyrata subsp.
lyrata]
Length = 508
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/514 (66%), Positives = 411/514 (79%), Gaps = 10/514 (1%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
LKI+LV+ST+S EFTHL + ++S+++ LDAEWKPQ S+ S+FP V+LLQ+AC R +
Sbjct: 5 LKIYLVSSTDSSEFTHLKWSFTRSTIIALDAEWKPQHSNTSSFPTVTLLQVAC----RLS 60
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
+D+ S VFL+DL+SI LPS+WELL E+FVSPD+LKLGF+FKQDL+YLSSTF GC
Sbjct: 61 YATDDDEVSDVFLIDLTSIHLPSVWELLNEMFVSPDVLKLGFRFKQDLVYLSSTFTQHGC 120
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ GF V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS R
Sbjct: 121 EGGFQEVKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYR 180
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
PLTEEQK YAA DAHCL++IF++F+ + + I+ DS ++GL+ IL + D
Sbjct: 181 PLTEEQKLYAATDAHCLLQIFDVFKAHLVE------GITVQDSREKNVGLQEILTESDYS 234
Query: 249 NKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRE 308
+K V KLC+A D+IR+ S Q + VVSR + LNTMPMDE+L+KIVRKYGE+ILL+E
Sbjct: 235 SKIVTAKLCKATDVIRSMSENGQNIANRVVSRKTTLNTMPMDENLLKIVRKYGERILLKE 294
Query: 309 CDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGL 368
D P KKK RKR S + K L DWQGPPPWDLSLGGDG PKFL DVMVEGL
Sbjct: 295 SDLLPNKLKKKTRKRVSSSSMNTNKHLVCSADWQGPPPWDLSLGGDGCPKFLLDVMVEGL 354
Query: 369 AKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLL 428
AKHLRCVGIDAA P SKKP+ REL+DQ KE RVLLTRD KLLRHQ L K+QIYRVKSLL
Sbjct: 355 AKHLRCVGIDAAIPHSKKPDSRELLDQAFKENRVLLTRDTKLLRHQDLAKHQIYRVKSLL 414
Query: 429 KNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKN 488
KN+QLLEVIE FQLKIS +QLMSRCTKCNG+FIQKPLS EEA+EAAKGFQRIP+CLF+KN
Sbjct: 415 KNEQLLEVIETFQLKISGNQLMSRCTKCNGKFIQKPLSIEEAIEAAKGFQRIPNCLFNKN 474
Query: 489 LQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
L+FWQCM+C+QLYWEGTQYHNAVQKF++VCKL+E
Sbjct: 475 LEFWQCMNCHQLYWEGTQYHNAVQKFMEVCKLSE 508
>gi|357436407|ref|XP_003588479.1| hypothetical protein MTR_1g007660 [Medicago truncatula]
gi|355477527|gb|AES58730.1| hypothetical protein MTR_1g007660 [Medicago truncatula]
Length = 512
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/526 (65%), Positives = 415/526 (78%), Gaps = 18/526 (3%)
Query: 1 MDCTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
MD +KPL+IH VT+T+SPEFTHL R+L+Q+SLVGLDAEWKP R+HQ++FP VSLLQ+A
Sbjct: 1 MDPPNQKPLEIHFVTTTDSPEFTHLTRSLTQTSLVGLDAEWKPVRTHQNSFPTVSLLQIA 60
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
CQ G DE VVFLLDL S+PL SIWE L+E+ VS DILKLGF+FKQDL+YLS
Sbjct: 61 CQLG------DDE----VVFLLDLISLPLSSIWEPLREMLVSADILKLGFRFKQDLVYLS 110
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKEL 180
STFC QGC+ GFD+VEPYLDITS+YNHL K+ GR K+ KSL+ IC ELL I+LSKEL
Sbjct: 111 STFCEQGCNPGFDKVEPYLDITSVYNHLQFKKNGRIASKQNKSLSTICGELLGITLSKEL 170
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKG 240
QCSDWS RPLTEEQ YAA+DAHCL+ IF +FQ VA++G + + L + +LGLK
Sbjct: 171 QCSDWSQRPLTEEQMTYAAMDAHCLLGIFKVFQATVAKEGELVNKTNILSIRSANLGLKE 230
Query: 241 ILEKPDIGNKTVRFKLCEALDIIRATSYYSQCL----PEGVVSRVSYLNTMPMDESLVKI 296
+ K D +K + CEAL I++ATS V+ + S +T PMDE L+KI
Sbjct: 231 LFRKHDTSDKVHSTQFCEALAIVQATSCSDVVRVISSAGAVIQKSSCRDTKPMDEFLLKI 290
Query: 297 VRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGY 356
VRK+G++ILL+E D+APKTSKKK +K+ + +EK L++ +WQG PWD +GGDG+
Sbjct: 291 VRKHGDRILLKESDRAPKTSKKKRKKQLPINGIPKEKHLENFDEWQGTAPWDPLVGGDGF 350
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
PKFLCDVMVEGLAKHLRCVGIDAA P SKKPEPRELI + KEKRVLLTRDAKLLRH Y
Sbjct: 351 PKFLCDVMVEGLAKHLRCVGIDAAVPSSKKPEPRELITKAQKEKRVLLTRDAKLLRHDY- 409
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
QIY+VKSLLKN+QLLE+IE FQL I+EDQLMSRCTKCNGRFIQKPLSTEEA+EAAKG
Sbjct: 410 ---QIYKVKSLLKNEQLLEIIETFQLNINEDQLMSRCTKCNGRFIQKPLSTEEAIEAAKG 466
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
FQ+IP+CLF+KNL+FWQCMDC+QLYWEGTQYHNAVQKF+D+CKL++
Sbjct: 467 FQKIPNCLFNKNLEFWQCMDCHQLYWEGTQYHNAVQKFVDICKLSD 512
>gi|15237941|ref|NP_197822.1| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
gi|10177895|dbj|BAB11227.1| unnamed protein product [Arabidopsis thaliana]
gi|30102678|gb|AAP21257.1| At5g24340 [Arabidopsis thaliana]
gi|110743600|dbj|BAE99637.1| hypothetical protein [Arabidopsis thaliana]
gi|332005912|gb|AED93295.1| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
Length = 505
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/514 (65%), Positives = 411/514 (79%), Gaps = 13/514 (2%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
LKI+LV+ST+S EFTHL + ++S+++ LDAEWKPQ S+ S+FP V+LLQ+AC+
Sbjct: 5 LKIYLVSSTDSSEFTHLKWSFTRSTIIALDAEWKPQHSNTSSFPTVTLLQVACRL----- 59
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
S ++ S VFL+DLSSI LPS+WELL ++FVSPD+LKLGF+FKQDL+YLSSTF GC
Sbjct: 60 --SHATDVSDVFLIDLSSIHLPSVWELLNDMFVSPDVLKLGFRFKQDLVYLSSTFTQHGC 117
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ GF V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS R
Sbjct: 118 EGGFQEVKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYR 177
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
PLTEEQK YAA DAHCL++IF++F+ + + I+ D +++GL+ IL + D
Sbjct: 178 PLTEEQKLYAATDAHCLLQIFDVFEAHLVE------GITVQDLRVINVGLQEILTESDYS 231
Query: 249 NKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRE 308
+K V KLC+A D+IR+ S Q + GVV R + LNTMPMDE+L+KIVRK+GE+ILL+E
Sbjct: 232 SKIVTVKLCKATDVIRSMSENGQNIANGVVPRKTTLNTMPMDENLLKIVRKFGERILLKE 291
Query: 309 CDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGL 368
D PK KKK R+R + + K+L DWQGPPPWD SLGGDG PKFL DVMVEGL
Sbjct: 292 SDLLPKKLKKKTRRRVASSTMNTNKQLVCSADWQGPPPWDSSLGGDGCPKFLLDVMVEGL 351
Query: 369 AKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLL 428
AKHLRCVGIDAA P SKKP+ REL+DQ KE RVLLTRD KLLRHQ L K+QIYRVKSLL
Sbjct: 352 AKHLRCVGIDAAIPHSKKPDSRELLDQAFKENRVLLTRDTKLLRHQDLAKHQIYRVKSLL 411
Query: 429 KNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKN 488
KN+QLLEVIE FQLKIS +QLMSRCTKCNG+FIQKPLS EEA+EAAKGFQRIP+CLF+KN
Sbjct: 412 KNEQLLEVIETFQLKISGNQLMSRCTKCNGKFIQKPLSIEEAIEAAKGFQRIPNCLFNKN 471
Query: 489 LQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
L+FWQCM+C+QLYWEGTQYHNAVQKF++VCKL+E
Sbjct: 472 LEFWQCMNCHQLYWEGTQYHNAVQKFMEVCKLSE 505
>gi|224135103|ref|XP_002321984.1| predicted protein [Populus trichocarpa]
gi|222868980|gb|EEF06111.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/505 (69%), Positives = 401/505 (79%), Gaps = 44/505 (8%)
Query: 1 MDCTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQR--SHQSNFPRVSLLQ 58
MD KPLKIHLV STESPEFTHL ++L++SS++GLDAEWKP R +HQ FP VSLLQ
Sbjct: 1 MDLPSEKPLKIHLVNSTESPEFTHLTQSLTRSSIIGLDAEWKPIRGQTHQPTFPTVSLLQ 60
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIY 118
LACQ G +SDES FLLDL S+PLPSIWELL+E FVSPDILKLGFKFKQDL+Y
Sbjct: 61 LACQLGH----DSDESET---FLLDLHSVPLPSIWELLRETFVSPDILKLGFKFKQDLVY 113
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK 178
LSSTFC QGCD GFD+VEPYLDITSIY + HKQ GRK PKETKSLA ICKE+L ISLSK
Sbjct: 114 LSSTFCLQGCDPGFDKVEPYLDITSIYYQMQHKQQGRKGPKETKSLATICKEVLGISLSK 173
Query: 179 ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGL 238
ELQCSDWS+RPLTEEQK YAA DAHCL++IFN+FQ + +KG+ L
Sbjct: 174 ELQCSDWSHRPLTEEQKTYAAADAHCLLKIFNVFQDNIVKKGS--------------WWL 219
Query: 239 KGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVR 298
K TV + C+ + + + VSR S NTMPM+ESL+KIVR
Sbjct: 220 KA----------TVSSENCQRIAEV-----------DVAVSRTSSRNTMPMNESLLKIVR 258
Query: 299 KYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPK 358
KYGEKILLRE D+ PK ++KK +K S++ +REK+LD+ GDWQGPPPWDLSLGGDG PK
Sbjct: 259 KYGEKILLRESDRKPKAARKKAKKHPSLVAVTREKQLDNTGDWQGPPPWDLSLGGDGCPK 318
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FLCDVM+EGLAKHLRCVG+DAA P SKKPE REL+DQ +E+RVLLTRDAKLLRHQYLIK
Sbjct: 319 FLCDVMIEGLAKHLRCVGVDAAIPSSKKPESRELLDQAYREQRVLLTRDAKLLRHQYLIK 378
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
NQIYRVK+LLKN+QLLEVIE FQL+I+EDQLMSRCTKCNGRFIQKPL+TEEAVEAAKGFQ
Sbjct: 379 NQIYRVKNLLKNEQLLEVIETFQLQINEDQLMSRCTKCNGRFIQKPLTTEEAVEAAKGFQ 438
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWE 503
RIPDCLF+KNL+FWQCM+CNQLYWE
Sbjct: 439 RIPDCLFNKNLEFWQCMECNQLYWE 463
>gi|449456993|ref|XP_004146233.1| PREDICTED: probable exonuclease mut-7 homolog [Cucumis sativus]
gi|449522385|ref|XP_004168207.1| PREDICTED: probable exonuclease mut-7 homolog [Cucumis sativus]
Length = 524
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/530 (64%), Positives = 413/530 (77%), Gaps = 14/530 (2%)
Query: 1 MDCTYRKP-LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRS--HQSNFPRVSLL 57
MD +P +IHLV+S +SPEFT L L++S L+ LDAEWKP ++ S+FPRVSLL
Sbjct: 1 MDSHIARPAFEIHLVSSIDSPEFTLLTHTLTRSHLIALDAEWKPLQTPDQHSSFPRVSLL 60
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLI 117
Q+ACQ SD N SV FLLDL S+PL SIW LL+++FVSP +LKLGF+FKQDL+
Sbjct: 61 QIACQF------HSDHRNDSVAFLLDLLSVPLSSIWHLLRDVFVSPYVLKLGFRFKQDLV 114
Query: 118 YLSSTFCSQGCDIG--FDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDIS 175
YLS+TF S G DR+EP++DI SIY HL HKQ GRKL K++KSL IC E+L S
Sbjct: 115 YLSTTFSSYGGGGVSGLDRIEPFMDIASIYYHLQHKQKGRKLHKQSKSLTAICSEVLGFS 174
Query: 176 LSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLD 235
LSKELQCSDWS RPLTEEQ YAA+DAHCL+EIFN+F KV ++G+ ++S + S+ ++
Sbjct: 175 LSKELQCSDWSVRPLTEEQIAYAAMDAHCLLEIFNVFYSKVLKEGDVLRNVSAVPSTEMN 234
Query: 236 LGLKGILEKPDIGNKTVRFKLCEALDIIRAT-SYYSQCLPE--GVVSRVSYLNTMPMDES 292
GL+ ILEK D+ K +R K+ EA +IIRAT S + Q + G+ S S +N MPMDE
Sbjct: 235 TGLRVILEKQDMHEKILRTKVSEASNIIRATASGFPQSMANIRGICSASSSINCMPMDED 294
Query: 293 LVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLG 352
L K+V+ YGE+I+L+E DK PKTSK+K ++ S++ V EK++ DW GPPPWDLSLG
Sbjct: 295 LQKVVKSYGERIILKESDKKPKTSKRKSKRSSTMKVGCIEKQIVSDEDWHGPPPWDLSLG 354
Query: 353 GDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLR 412
GDG PKFLCDVMVEGLAKHLRCVG+DAA P SK P RELIDQ KEKRVLLTRDAKLLR
Sbjct: 355 GDGCPKFLCDVMVEGLAKHLRCVGVDAAVPFSKNPYSRELIDQAHKEKRVLLTRDAKLLR 414
Query: 413 HQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
H YL++NQIYRVK+LLKN+QLLEVIE F LKISEDQLMSRCTKCNGRFIQK L+TEEAV+
Sbjct: 415 HGYLLRNQIYRVKNLLKNEQLLEVIETFDLKISEDQLMSRCTKCNGRFIQKSLTTEEAVQ 474
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
AAKGFQ+IP+CLFD+NL+FWQCMDC+QLYWEG QY NAVQKFIDVCKLN+
Sbjct: 475 AAKGFQKIPNCLFDQNLEFWQCMDCHQLYWEGIQYRNAVQKFIDVCKLND 524
>gi|356550873|ref|XP_003543807.1| PREDICTED: probable exonuclease mut-7 homolog [Glycine max]
Length = 506
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 327/520 (62%), Positives = 404/520 (77%), Gaps = 25/520 (4%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPR 66
K LK+HLVT T+S EF L+ AL+++S+VGLDAEWKP R FPRV++LQ+AC
Sbjct: 8 KLLKVHLVTCTDSAEFALLSSALTRTSVVGLDAEWKPVRRL---FPRVAVLQIAC----- 59
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ 126
S VFLLDL S+PL S+W L+EL +SPDILKLGF FKQDL+YLSSTF S
Sbjct: 60 --------GDSAVFLLDLLSLPLSSLWAPLRELLLSPDILKLGFGFKQDLVYLSSTFASH 111
Query: 127 GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWS 186
G GFD+VEPYLDI S+YNHL H + + +PK++KSL+ IC E+L SLSKELQCSDWS
Sbjct: 112 G---GFDKVEPYLDIKSVYNHLQHNK--KHVPKQSKSLSTICAEVLGFSLSKELQCSDWS 166
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPD 246
+RPLTEEQ YAA+DAHCL++IF +FQ KV ++G+ + L + + LGLK + + D
Sbjct: 167 HRPLTEEQITYAAMDAHCLLDIFEVFQAKVVKEGDLILETTVLSNPDASLGLKELFQNHD 226
Query: 247 IGNKTVRFKLCEALDIIRAT--SYYSQCLP--EGVVSRVSYLNTMPMDESLVKIVRKYGE 302
+ +K +R EAL I++AT S +Q +P G++ + S T+PMDE L+K+V+KY +
Sbjct: 227 MSDKVLRAHFSEALAIVQATTCSDTAQMIPLAGGMIQKSSCWVTVPMDEVLLKVVKKYSD 286
Query: 303 KILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCD 362
KILL+E D+ PK+SKKKG+K S S EK + +W+G PPWD +GG+ YPKFLCD
Sbjct: 287 KILLKESDRKPKSSKKKGKKHSLFNGISLEKHFEKSDEWRGTPPWDPLVGGNAYPKFLCD 346
Query: 363 VMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIY 422
VMVEGLAKHLRCVGIDAA P SKKPEPR LI+Q KEKRV+LTRDAKLLRH YL KNQIY
Sbjct: 347 VMVEGLAKHLRCVGIDAAIPYSKKPEPRMLIEQAQKEKRVILTRDAKLLRHDYLTKNQIY 406
Query: 423 RVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPD 482
RVK+LLKN+QLLEVIEAFQ+KI+EDQLMSRCTKCNG FIQKPL+TEEA+EAAKGFQRIP+
Sbjct: 407 RVKTLLKNEQLLEVIEAFQIKINEDQLMSRCTKCNGTFIQKPLTTEEAIEAAKGFQRIPN 466
Query: 483 CLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
CLF+KNL+FWQCMDC+QLYWEGTQYHNAVQKF+D+CKL++
Sbjct: 467 CLFNKNLEFWQCMDCHQLYWEGTQYHNAVQKFVDICKLSD 506
>gi|356554607|ref|XP_003545636.1| PREDICTED: LOW QUALITY PROTEIN: probable exonuclease mut-7 homolog
[Glycine max]
Length = 499
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 327/525 (62%), Positives = 399/525 (76%), Gaps = 29/525 (5%)
Query: 1 MDCTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
MD LK+HLVT T+SPEF L+ ALS++S+VGLDAEWKP R +FPRV++LQ+A
Sbjct: 1 MDGGDPAKLKVHLVTRTDSPEFALLSSALSRTSVVGLDAEWKPVRR---SFPRVAVLQIA 57
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
C S VF+LDL S+PL S+W+ L+EL +SPDILKLGF FKQDL+YLS
Sbjct: 58 C-------------GDSAVFVLDLLSLPLSSLWDPLRELLLSPDILKLGFGFKQDLVYLS 104
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKEL 180
STF S G GFD+VEPYLDI S+YNHL H + + +PK++KSL+ IC E+L SLSKEL
Sbjct: 105 STFASHG---GFDKVEPYLDIKSVYNHLQHNK--KHVPKQSKSLSTICTEVLGFSLSKEL 159
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKG 240
QCSDWS RPLTEEQ YAA+DAHCL++IF +FQ K +K + I + + LGLK
Sbjct: 160 QCSDWSYRPLTEEQITYAAMDAHCLLDIFEVFQTKFVKK----AFIKDFKRV-VCLGLKE 214
Query: 241 ILEKPDIGNKTVRFKLCEALDIIRATS---YYSQCLPEGVVSRVSYLNTMPMDESLVKIV 297
+ D +K +R + CEAL I++AT+ G + S T+PMDE L+K+V
Sbjct: 215 LFRNHDTSDKVLRAQFCEALAIVQATTCSDAAQMIFSRGNDPKSSCWVTVPMDEVLLKVV 274
Query: 298 RKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYP 357
+KYG++ILL+E D+ PK+SKKKG+K S S+EK + WQG PPWD +GG+GYP
Sbjct: 275 KKYGDRILLKESDRKPKSSKKKGKKHSLFNGISQEKHFEKSDGWQGTPPWDPLVGGNGYP 334
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KFLCDVMVEGLAKHLRCVGIDAA P SKKPEPR LI+Q KEKRV+LT DAKLLRH YL
Sbjct: 335 KFLCDVMVEGLAKHLRCVGIDAAVPYSKKPEPRMLIEQAQKEKRVILTWDAKLLRHDYLT 394
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+NQIYRVKSLLKN+QLLEVIEAFQ+KI+ED+LMSRCTKCNG FIQKPL+TEEA+EAAKGF
Sbjct: 395 QNQIYRVKSLLKNEQLLEVIEAFQIKINEDKLMSRCTKCNGTFIQKPLTTEEAIEAAKGF 454
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
QRIP+CLF+KNL+FWQCMDC+QLYWEGTQYHNAVQKFID+CKL++
Sbjct: 455 QRIPNCLFNKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDICKLSD 499
>gi|414589140|tpg|DAA39711.1| TPA: hypothetical protein ZEAMMB73_184842 [Zea mays]
Length = 618
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 291/551 (52%), Positives = 363/551 (65%), Gaps = 76/551 (13%)
Query: 1 MDCTYRKPLKIHLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQS---------- 49
MD P +HLVT S L R+L+ + +V LDAEWKP+R
Sbjct: 115 MDHAPAPPFAVHLVTGGGSSSGIALLLRSLAAARVVALDAEWKPRRRGSPAAADPAALGD 174
Query: 50 -------------NFPRVSLLQLACQPGPRFNPESDESNA-SVVFLLDLSSIPLPSIWEL 95
FP V+LLQ+AC RF+ S VF++DL S+PL +W
Sbjct: 175 DTTPASETSPAPPKFPTVTLLQVAC----RFSDGGGGEGERSEVFVVDLLSVPLADLWAP 230
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLG 154
L+ELF P+ LKLGF+FKQDL+YLSSTF + GCD GFDRVEP+LD+T+IY +L
Sbjct: 231 LRELFERPETLKLGFRFKQDLVYLSSTFSAALGCDSGFDRVEPFLDVTNIYYYLKGHDRQ 290
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
+KLPKETKSLA IC+ELL I LSKELQCSDWS RPL+E Q YAA DA+ L++IF++FQ
Sbjct: 291 KKLPKETKSLATICEELLGILLSKELQCSDWSCRPLSEGQIQYAASDAYYLLDIFDLFQK 350
Query: 215 KVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLP 274
++ +G CSS +EL S + C ++ I ++S Y C
Sbjct: 351 RITMEGK-CSSTTELTSD----------------------RHCSSVVIECSSSGYGIC-- 385
Query: 275 EGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKR 334
L+ IV KY EKI+L E D P+TS++K + + + + KR
Sbjct: 386 --------------SGSCLMSIVTKYSEKIILTESDAKPRTSRRKEKLK----IPANAKR 427
Query: 335 LDDI---GDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE 391
D++ +WQGPPPWD S+GGDGYPKFLCDVM+EGLAKHLRCVGIDAA P SKKPEPR+
Sbjct: 428 KDNVDCSSEWQGPPPWDPSIGGDGYPKFLCDVMIEGLAKHLRCVGIDAAIPSSKKPEPRD 487
Query: 392 LIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMS 451
L++QT KE R+LLTRDAKLL++QYL NQ+YRVKSLLK+ QL EVI FQLKISEDQLMS
Sbjct: 488 LLNQTYKEGRILLTRDAKLLKYQYLAGNQVYRVKSLLKHDQLAEVINIFQLKISEDQLMS 547
Query: 452 RCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAV 511
RCTKCNG FIQKPL+ EEAVEA+KGFQ IP CLF++NL+FW+C DCNQLYWEGTQYHNAV
Sbjct: 548 RCTKCNGSFIQKPLTLEEAVEASKGFQIIPTCLFNRNLEFWKCTDCNQLYWEGTQYHNAV 607
Query: 512 QKFIDVCKLNE 522
Q+F+ VC +++
Sbjct: 608 QRFLSVCNISD 618
>gi|242048348|ref|XP_002461920.1| hypothetical protein SORBIDRAFT_02g010640 [Sorghum bicolor]
gi|241925297|gb|EER98441.1| hypothetical protein SORBIDRAFT_02g010640 [Sorghum bicolor]
Length = 505
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/514 (54%), Positives = 344/514 (66%), Gaps = 70/514 (13%)
Query: 34 LVGLDAEWKPQRSHQS------------------------NFPRVSLLQLACQPGPRFNP 69
+V LDAEWKP+R FP V+LLQ+AC+ G
Sbjct: 37 VVALDAEWKPRRRGSPAAAAPAALGDGSTSLALEASPAPPKFPTVTLLQVACRFG----- 91
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GC 128
+ E S VF++DL S+PL +W L+ELF PD LKLGF+FKQDL+YLS+TF + GC
Sbjct: 92 DGSEGERSEVFVVDLLSVPLADLWAPLRELFERPDALKLGFRFKQDLVYLSATFSAALGC 151
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
D GFDRVEP+LD+T+IY +L +KLPKETKSLA IC+ELL + LSKELQCSDWS R
Sbjct: 152 DSGFDRVEPFLDVTNIYYYLKGHDRQKKLPKETKSLATICEELLSVFLSKELQCSDWSCR 211
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
PL+E Q YAA DA+ L+ IF++FQ K+ +G CSS +EL LD ++
Sbjct: 212 PLSEGQIQYAASDAYYLLGIFDLFQKKITMEGQ-CSSTTEL---TLDRHFSPVV------ 261
Query: 249 NKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRE 308
I ++S Y C L+ IV KY EKI+L E
Sbjct: 262 -------------IECSSSGYDIC----------------SGSCLMSIVTKYSEKIILTE 292
Query: 309 CDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGL 368
D +TS++K + + ++K +D +WQGPPPWD S+GGDGYPKFLCDVM+EGL
Sbjct: 293 SDAKQRTSRRKEKLKIPANAKCKDK-VDCSSEWQGPPPWDPSIGGDGYPKFLCDVMIEGL 351
Query: 369 AKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLL 428
AKHLRCVGIDAA P S+KPEPR+L++QT KE R+LLTRDAKLL++QYL NQ+YRVKSLL
Sbjct: 352 AKHLRCVGIDAAIPSSRKPEPRDLLNQTYKEGRILLTRDAKLLKYQYLAGNQVYRVKSLL 411
Query: 429 KNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKN 488
K+ QL EVI FQLKISEDQLMSRCTKCNG FIQKPL+ EEAVEA+KGFQ IP CLF++N
Sbjct: 412 KHDQLAEVINTFQLKISEDQLMSRCTKCNGSFIQKPLTLEEAVEASKGFQVIPSCLFNRN 471
Query: 489 LQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
L+FW+C DCNQLYWEGTQYHNAVQKF+ VC +++
Sbjct: 472 LEFWKCTDCNQLYWEGTQYHNAVQKFLSVCNISD 505
>gi|326513036|dbj|BAK03425.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/531 (51%), Positives = 356/531 (67%), Gaps = 68/531 (12%)
Query: 9 LKIHLVTS-TESPEFTHLARALSQSSLVGLDAEWKPQ--------------RSHQSNFPR 53
L +HLV SPE +HL ++LS + +V DAEWKP+ + + P
Sbjct: 11 LAVHLVAGDVSSPELSHLIQSLSTARIVAFDAEWKPRCRAPSAPSDDASPAPRNPAQLPT 70
Query: 54 VSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFK 113
V++LQLAC+ E + VF++DL ++PL +W L+ELF PD+LKLGF+FK
Sbjct: 71 VTVLQLACR---------GEDGGNEVFVVDLLAVPLADLWAPLRELFERPDVLKLGFRFK 121
Query: 114 QDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELL 172
QDL+YLS+TF + GCD GF+RVEP+LD+T++Y +L +LPKETKSLA+IC+ELL
Sbjct: 122 QDLVYLSATFTAALGCDSGFNRVEPFLDVTNVYYYLKGHDTQTRLPKETKSLASICEELL 181
Query: 173 DISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSS 232
++SLSKELQCSDWS RPL+E Q YAA DA+ L+ IF++F KV+ + CSS +E
Sbjct: 182 NVSLSKELQCSDWSCRPLSEGQIQYAASDAYYLLYIFDLFHQKVSIE-EKCSSTAEASDE 240
Query: 233 NLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDES 292
+ + S+C G N + D
Sbjct: 241 HF-------------------------------SQRASECSSSG--------NDICFDGY 261
Query: 293 LVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIG-DWQGPPPWDLSL 351
L I+ KY ++ILL E D +S++K +++ S D+R K D G +W GPPPWD S+
Sbjct: 262 LTSIITKYSDRILLTESDMKAHSSRRKEKQKLSS--DARCKEKFDYGTEWTGPPPWDPSV 319
Query: 352 GGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLL 411
GGDGYPKFLCDVM+EGLAKHLRCVG+DAATP KKP+PREL++Q KE R+LLTRDAKL+
Sbjct: 320 GGDGYPKFLCDVMIEGLAKHLRCVGLDAATPSCKKPQPRELLNQIYKEGRILLTRDAKLI 379
Query: 412 RHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAV 471
++QYL NQ+YRVKSLLK QL EVI+ F+LKISED+LMSRCTKCNG FIQKPL+ +EA+
Sbjct: 380 KYQYLATNQVYRVKSLLKPDQLAEVIDTFKLKISEDRLMSRCTKCNGIFIQKPLTLDEAM 439
Query: 472 EAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
EA+KGFQ IP CLF++N++FW+C DCNQLYWEGTQYHNAVQKF+ VC ++E
Sbjct: 440 EASKGFQVIPSCLFNRNMEFWKCTDCNQLYWEGTQYHNAVQKFMSVCNISE 490
>gi|357122944|ref|XP_003563173.1| PREDICTED: probable exonuclease mut-7 homolog [Brachypodium
distachyon]
Length = 492
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 271/532 (50%), Positives = 350/532 (65%), Gaps = 68/532 (12%)
Query: 9 LKIHLVTS-TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSN----------------F 51
+HLV+ + SPE L ++L+ + +V LDAEWKP+R S F
Sbjct: 11 FAVHLVSGGSSSPELPLLLQSLAAARVVALDAEWKPRRRGASAPGPVDGASPALPNPPLF 70
Query: 52 PRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFK 111
P V++LQLAC+ E S VF++DL ++PL +W L++LF PD LKLGF+
Sbjct: 71 PTVTVLQLACR---------GEEGCSEVFVVDLLAVPLADLWAPLRQLFERPDALKLGFR 121
Query: 112 FKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKE 170
FKQDL+YLS+TF + G D FDRVE +LD+T++Y +L ++LPKETKSLA IC+E
Sbjct: 122 FKQDLVYLSATFTAALGSDSRFDRVEAFLDVTNVYYYLMGHDRQKRLPKETKSLATICEE 181
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
LL++SLSKELQCSDWS RPL+E Q YAA DA+ L++IF++F KV + S++ D
Sbjct: 182 LLNVSLSKELQCSDWSCRPLSEGQIQYAASDAYYLLDIFDLFHQKVRTEEKCVSTMETSD 241
Query: 231 SSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMD 290
C I ++S Y C D
Sbjct: 242 QH------------------------CPQRAIECSSSGYVIC----------------SD 261
Query: 291 ESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLS 350
+ L I+ KY ++ILL E D ++S++K +++ S +EK D +WQGPPPWD S
Sbjct: 262 DYLTSIITKYSDRILLAESDTKARSSRRKQKQKLSTDAKCKEK-FDCNTEWQGPPPWDPS 320
Query: 351 LGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL 410
+GGDGYPKFLCDVM+EGLAKHLRCVGIDAATP KKP+PREL++Q KE R+LLTRD KL
Sbjct: 321 VGGDGYPKFLCDVMIEGLAKHLRCVGIDAATPSCKKPQPRELLNQAYKEGRILLTRDIKL 380
Query: 411 LRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEA 470
L++QYL NQ+Y+VK LLK+ QL EVI+ FQLKISED+LMSRCTKCNG FIQKPL+ EEA
Sbjct: 381 LKYQYLATNQVYKVKGLLKHDQLAEVIDTFQLKISEDRLMSRCTKCNGSFIQKPLTLEEA 440
Query: 471 VEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
+EA+KGFQ IP CLF++NL+FW+C DCNQLYWEGTQYHNAVQKF+ VC + E
Sbjct: 441 MEASKGFQVIPSCLFNRNLEFWKCTDCNQLYWEGTQYHNAVQKFMSVCNIGE 492
>gi|115471903|ref|NP_001059550.1| Os07g0452400 [Oryza sativa Japonica Group]
gi|113611086|dbj|BAF21464.1| Os07g0452400 [Oryza sativa Japonica Group]
Length = 501
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 274/532 (51%), Positives = 357/532 (67%), Gaps = 62/532 (11%)
Query: 9 LKIHLVTST-ESPEFTHLARALSQSSLVGLDAEWKPQRSHQS----------------NF 51
L +HLVT SPE L R+L+ + +V LDAEWKP+R + F
Sbjct: 14 LAVHLVTGGGSSPEHALLLRSLAAARVVALDAEWKPRRRGPAVADDPSAAAAATPPPLQF 73
Query: 52 PRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFK 111
P V+LLQ+AC R + + + A+ VF++DL ++PL + E L+ELF P++LKLGF+
Sbjct: 74 PTVTLLQVAC----RGDGDGGGAAAAEVFVVDLLAVPLAELREPLRELFERPEVLKLGFR 129
Query: 112 FKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKE 170
FKQDL+YLS+TF + G GF+RVEP+LD+T+ Y +L + ++LP+ETKSLA IC+E
Sbjct: 130 FKQDLVYLSATFAAALGSSAGFERVEPFLDVTNAYYYLKGHDMQKRLPRETKSLATICEE 189
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
LL + LSKELQCSDWS RPL+E Q YAA DA+ L++IF++F K+ +G C +EL
Sbjct: 190 LLGVYLSKELQCSDWSYRPLSEGQIQYAASDAYYLLDIFDLFHQKIRTEGK-CLPTNELT 248
Query: 231 SSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMD 290
S C D ++S + C D
Sbjct: 249 SDGH----------------------CPQRDAECSSSEDAVCF----------------D 270
Query: 291 ESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLS 350
+ +V KY EKILL E D P++S++K +++ + +EK + +WQG PPWD S
Sbjct: 271 DYFTSVVMKYAEKILLTESDTKPRSSRRKEKQKLATNAKCKEK-FEGSTEWQGLPPWDPS 329
Query: 351 LGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL 410
GGDG PKFLCDVM+EGLAKHLRCVGIDAATP S+KPEPREL++QT KE+RVLLTRD KL
Sbjct: 330 AGGDGCPKFLCDVMIEGLAKHLRCVGIDAATPSSRKPEPRELLNQTYKERRVLLTRDVKL 389
Query: 411 LRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEA 470
L++QYL NQ+YRVKSLLK+ QL EVI+ FQLKISED+LMSRCTKCNGRFIQKPL+ +EA
Sbjct: 390 LKYQYLTSNQVYRVKSLLKHDQLAEVIDTFQLKISEDKLMSRCTKCNGRFIQKPLTLDEA 449
Query: 471 VEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
+EA+KGFQ IP CLF +NL+FW+C DCNQLYWEGTQYHNAVQKF+ VC +++
Sbjct: 450 IEASKGFQIIPSCLFKRNLEFWKCTDCNQLYWEGTQYHNAVQKFLSVCNISD 501
>gi|125558189|gb|EAZ03725.1| hypothetical protein OsI_25856 [Oryza sativa Indica Group]
Length = 501
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/530 (51%), Positives = 354/530 (66%), Gaps = 62/530 (11%)
Query: 11 IHLVTST-ESPEFTHLARALSQSSLVGLDAEWKPQR----------------SHQSNFPR 53
+HLVT SPE L R+L+ + +V LDAEWKP+R FP
Sbjct: 16 VHLVTGGGSSPEHALLLRSLAAARVVALDAEWKPRRRGPAVADDPSAAAAATPPPPQFPT 75
Query: 54 VSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFK 113
V+LLQ+AC R + + + A+ VF++DL ++PL + E L+ELF P++LKLGF+FK
Sbjct: 76 VTLLQVAC----RGDGDGGGAAAAEVFVVDLLAVPLAELREPLRELFERPEVLKLGFRFK 131
Query: 114 QDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELL 172
QDL+YLS+TF + G GF+RVEP+LD+T+ Y +L + ++LP+ETKSLA IC+ELL
Sbjct: 132 QDLVYLSATFAAALGSSAGFERVEPFLDVTNAYYYLKGHDMQKRLPRETKSLATICEELL 191
Query: 173 DISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSS 232
+ LSKELQCSDWS RPL+E Q YAA DA+ L++IF++F K+ +G C +EL S
Sbjct: 192 GVYLSKELQCSDWSYRPLSEGQIQYAASDAYYLLDIFDLFHQKIRTEGK-CLPTNELTSD 250
Query: 233 NLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDES 292
C D ++S + C D+
Sbjct: 251 GH----------------------CPQRDAECSSSEDAVCF----------------DDY 272
Query: 293 LVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLG 352
+V KY EKILL E D P++S++K +++ + EK + +WQG PPWD S G
Sbjct: 273 FTSVVMKYAEKILLTESDTKPRSSRRKEKQKLATNAKCEEK-FEGSTEWQGLPPWDPSAG 331
Query: 353 GDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLR 412
GDG PKFLCDVM+EGLAKHLRCVGIDAATP S+KPEPREL++QT KE+RVLLTRD KLL+
Sbjct: 332 GDGCPKFLCDVMIEGLAKHLRCVGIDAATPSSRKPEPRELLNQTYKERRVLLTRDVKLLK 391
Query: 413 HQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
+QYL NQ+YRVKSLLK+ QL EVI+ FQLKISED+LMSRCTKCNGRFIQKPL+ +EA+E
Sbjct: 392 YQYLASNQVYRVKSLLKHDQLAEVIDTFQLKISEDKLMSRCTKCNGRFIQKPLTLDEAIE 451
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
A+KGFQ IP CLF +NL+FW+C DCNQLYWEGTQYHNAVQKF+ VC +++
Sbjct: 452 ASKGFQIIPSCLFKRNLEFWKCTDCNQLYWEGTQYHNAVQKFLSVCNISD 501
>gi|34394896|dbj|BAC84412.1| unknown protein [Oryza sativa Japonica Group]
Length = 501
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/513 (50%), Positives = 340/513 (66%), Gaps = 62/513 (12%)
Query: 9 LKIHLVTST-ESPEFTHLARALSQSSLVGLDAEWKPQRSHQS----------------NF 51
L +HLVT SPE L R+L+ + +V LDAEWKP+R + F
Sbjct: 14 LAVHLVTGGGSSPEHALLLRSLAAARVVALDAEWKPRRRGPAVADDPSAAAAATPPPLQF 73
Query: 52 PRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFK 111
P V+LLQ+AC R + + + A+ VF++DL ++PL + E L+ELF P++LKLGF+
Sbjct: 74 PTVTLLQVAC----RGDGDGGGAAAAEVFVVDLLAVPLAELREPLRELFERPEVLKLGFR 129
Query: 112 FKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKE 170
FKQDL+YLS+TF + G GF+RVEP+LD+T+ Y +L + ++LP+ETKSLA IC+E
Sbjct: 130 FKQDLVYLSATFAAALGSSAGFERVEPFLDVTNAYYYLKGHDMQKRLPRETKSLATICEE 189
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
LL + LSKELQCSDWS RPL+E Q YAA DA+ L++IF++F K+ +G C +EL
Sbjct: 190 LLGVYLSKELQCSDWSYRPLSEGQIQYAASDAYYLLDIFDLFHQKIRTEGK-CLPTNELT 248
Query: 231 SSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMD 290
S C D ++S + C D
Sbjct: 249 SDGH----------------------CPQRDAECSSSEDAVCF----------------D 270
Query: 291 ESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLS 350
+ +V KY EKILL E D P++S++K +++ + +EK + +WQG PPWD S
Sbjct: 271 DYFTSVVMKYAEKILLTESDTKPRSSRRKEKQKLATNAKCKEK-FEGSTEWQGLPPWDPS 329
Query: 351 LGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL 410
GGDG PKFLCDVM+EGLAKHLRCVGIDAATP S+KPEPREL++QT KE+RVLLTRD KL
Sbjct: 330 AGGDGCPKFLCDVMIEGLAKHLRCVGIDAATPSSRKPEPRELLNQTYKERRVLLTRDVKL 389
Query: 411 LRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEA 470
L++QYL NQ+YRVKSLLK+ QL EVI+ FQLKISED+LMSRCTKCNGRFIQKPL+ +EA
Sbjct: 390 LKYQYLTSNQVYRVKSLLKHDQLAEVIDTFQLKISEDKLMSRCTKCNGRFIQKPLTLDEA 449
Query: 471 VEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWE 503
+EA+KGFQ IP CLF +NL+FW+C DCNQLYWE
Sbjct: 450 IEASKGFQIIPSCLFKRNLEFWKCTDCNQLYWE 482
>gi|388514807|gb|AFK45465.1| unknown [Lotus japonicus]
Length = 236
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 176/236 (74%), Positives = 205/236 (86%)
Query: 287 MPMDESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPP 346
MPMDE L+ IV+K+G++ILL+E D+ PKTSKKK +K + + + LD +WQG P
Sbjct: 1 MPMDEFLLNIVKKHGDRILLKESDRKPKTSKKKRKKPLPINGNLKGNHLDKFDEWQGISP 60
Query: 347 WDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTR 406
WD S+GGDGYP+FLCDVMVEGLAKHLRCVGIDAA P SKKPEPRELI Q KE RVLLTR
Sbjct: 61 WDPSVGGDGYPRFLCDVMVEGLAKHLRCVGIDAAIPYSKKPEPRELIMQVQKENRVLLTR 120
Query: 407 DAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLS 466
DAKLLRH YL NQIY+VKSLLKN+QLLE+IE FQLKISED+LMSRCTKCNG FIQKPL+
Sbjct: 121 DAKLLRHDYLANNQIYKVKSLLKNEQLLEIIETFQLKISEDKLMSRCTKCNGMFIQKPLT 180
Query: 467 TEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
TEEAVEAAKGFQ+IP+CLF+KNL+FW+CMDC+QLYWEGTQYHNAVQKF+D+CKL++
Sbjct: 181 TEEAVEAAKGFQKIPNCLFNKNLEFWKCMDCHQLYWEGTQYHNAVQKFVDICKLSD 236
>gi|302810633|ref|XP_002987007.1| hypothetical protein SELMODRAFT_425875 [Selaginella moellendorffii]
gi|300145172|gb|EFJ11850.1| hypothetical protein SELMODRAFT_425875 [Selaginella moellendorffii]
Length = 797
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 214/516 (41%), Positives = 291/516 (56%), Gaps = 63/516 (12%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P I LV S + F AL +SS++ LDAEWKP S PRVSLLQ+AC+ F
Sbjct: 12 PSSIRLVDSIDGEAFQGFLLALQESSVIALDAEWKPV-SVAGTHPRVSLLQIACRKRD-F 69
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
PESD +VF++D+ SIP ++ + L+E + ILKLGFK +QDLI L+++ S
Sbjct: 70 GPESD-----LVFIVDVLSIPASALLQPLEEALETSRILKLGFKLRQDLINLAASLSSTA 124
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
F EPY+DI +Y+ + K RKLP +T SL++IC+++ L K LQCSDW
Sbjct: 125 ---SFS-CEPYIDIGKLYHEVKRKN-PRKLPGDTPSLSHICRDVFGRPLCKSLQCSDWEL 179
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKV--AQKGNSCSSISELDSSNLDLGLKGILEKP 245
RPLTEEQ +YAA DAHCL+ I + + Q+ + +S+ G+ +L P
Sbjct: 180 RPLTEEQISYAAADAHCLLAILDALHPYIIDMQRSKAVASV----------GIARLL-YP 228
Query: 246 D--IGNKTVRFK-LCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGE 302
D + RF+ + E D R + ++YL T SL
Sbjct: 229 DEELSPLVTRFRSMSEKAD--RTGKF------------LAYLLTFQQTLSL--------- 265
Query: 303 KILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCD 362
+ D KKK R R + D+ + +W GPPPWD +GGDG PKFLCD
Sbjct: 266 -----QADP-----KKKIRTRR--VRDTNRSQGQTEFEWCGPPPWDPVVGGDGCPKFLCD 313
Query: 363 VMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIY 422
+M+EGLA+ LRCVGIDAA P KP+ R+LI+Q +E R+LLTRD KLLR + + NQ Y
Sbjct: 314 IMIEGLARQLRCVGIDAACPHRLKPDARQLIEQAQREGRILLTRDVKLLRQRLIPSNQAY 373
Query: 423 RVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPD 482
RVK L K +QL E+IE F L +SE+ L+SRCT+CNG KPL+ ++A AA + D
Sbjct: 374 RVKHLTKKEQLTEIIETFHLTVSEEHLLSRCTRCNGELCPKPLTAQQAKAAAPNQKISED 433
Query: 483 CLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVC 518
L L FWQC +C LYW+G Q+ A+Q+F +C
Sbjct: 434 VLLQDGLLFWQCSECRHLYWQGLQFQRAMQRFSAMC 469
>gi|219362869|ref|NP_001137101.1| uncharacterized protein LOC100217277 [Zea mays]
gi|194698364|gb|ACF83266.1| unknown [Zea mays]
Length = 265
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/233 (69%), Positives = 194/233 (83%), Gaps = 7/233 (3%)
Query: 293 LVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDI---GDWQGPPPWDL 349
L+ IV KY EKI+L E D P+TS++K + + + + KR D++ +WQGPPPWD
Sbjct: 37 LMSIVTKYSEKIILTESDAKPRTSRRKEKLK----IPANAKRKDNVDCSSEWQGPPPWDP 92
Query: 350 SLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAK 409
S+GGDGYPKFLCDVM+EGLAKHLRCVGIDAA P SKKPEPR+L++QT KE R+LLTRDAK
Sbjct: 93 SIGGDGYPKFLCDVMIEGLAKHLRCVGIDAAIPSSKKPEPRDLLNQTYKEGRILLTRDAK 152
Query: 410 LLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEE 469
LL++QYL NQ+YRVKSLLK+ QL EVI FQLKISEDQLMSRCTKCNG FIQKPL+ EE
Sbjct: 153 LLKYQYLAGNQVYRVKSLLKHDQLAEVINIFQLKISEDQLMSRCTKCNGSFIQKPLTLEE 212
Query: 470 AVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
AVEA+KGFQ IP CLF++NL+FW+C DCNQLYWEGTQYHNAVQ+F+ VC +++
Sbjct: 213 AVEASKGFQIIPTCLFNRNLEFWKCTDCNQLYWEGTQYHNAVQRFLSVCNISD 265
>gi|125600097|gb|EAZ39673.1| hypothetical protein OsJ_24106 [Oryza sativa Japonica Group]
Length = 310
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 157/234 (67%), Positives = 192/234 (82%), Gaps = 1/234 (0%)
Query: 289 MDESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWD 348
D+ +V KY EKILL E D P++S++K +++ + +EK + +WQG PPWD
Sbjct: 78 FDDYFTSVVMKYAEKILLTESDTKPRSSRRKEKQKLATNAKCKEK-FEGSTEWQGLPPWD 136
Query: 349 LSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDA 408
S GGDG PKFLCDVM+EGLAKHLRCVGIDAATP S+KPEPREL++QT KE+RVLLTRD
Sbjct: 137 PSAGGDGCPKFLCDVMIEGLAKHLRCVGIDAATPSSRKPEPRELLNQTYKERRVLLTRDV 196
Query: 409 KLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTE 468
KLL++QYL NQ+YRVKSLLK+ QL EVI+ FQLKISED+LMSRCTKCNGRFIQKPL+ +
Sbjct: 197 KLLKYQYLTSNQVYRVKSLLKHDQLAEVIDTFQLKISEDKLMSRCTKCNGRFIQKPLTLD 256
Query: 469 EAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
EA+EA+KGFQ IP CLF +NL+FW+C DCNQLYWEGTQYHNAVQKF+ VC +++
Sbjct: 257 EAIEASKGFQIIPSCLFKRNLEFWKCTDCNQLYWEGTQYHNAVQKFLSVCNISD 310
>gi|168037922|ref|XP_001771451.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677178|gb|EDQ63651.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 565
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/518 (37%), Positives = 293/518 (56%), Gaps = 27/518 (5%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+I V S + EF AL ++ +V +DAEWKP R + PRVS++Q++C R
Sbjct: 29 RILFVDSPRTEEFEVFLIALEEAMIVAMDAEWKPVRRAGVS-PRVSIMQISC----RIRK 83
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
+ + V+F+LDL ++ LK + SP ILKLGF FKQD ++LS++F +
Sbjct: 84 DEFITGEEVIFVLDLLALSAADFAFPLKTMLCSPRILKLGFAFKQDQLHLSASFPGPEAN 143
Query: 130 IGFDRVEPYLDITSIYNHLHH------KQLGRKLP-KETKSLANICKELLDISLSKELQC 182
FD+VEPY+DI +Y H K G++ T SL I K +L L K+ QC
Sbjct: 144 GCFDKVEPYIDIAKLYKEFLHVNFSNLKHKGKRFVLGGTHSLTAISKAVLGHPLCKDAQC 203
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDS--SNLDLGLKG 240
S+W RPL+++Q YAA D HCL+ +F+ + ++ E + G
Sbjct: 204 SNWEQRPLSQDQILYAAADTHCLLALFDTLLSDAFALISPAPTLVEAGKIRETVPATPAG 263
Query: 241 ILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKY 300
+ P +G+ T ++ EA +R + S P G V + + E K V+KY
Sbjct: 264 YIFSPRMGSAT---EMVEA--ALRPSPPSSPLEPVGTVKQETS------SERYAKFVKKY 312
Query: 301 GEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFL 360
E++L+ E ++ +++ +R+ + + + L+ DW GP PWD+ +GGDG PKFL
Sbjct: 313 SERLLVNEESRSRSRARRPRARRARESLKNPDDALN--LDWVGPAPWDVRIGGDGTPKFL 370
Query: 361 CDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQ 420
CDVMVEGLA+ LRCVG+DAA+ +KK +PR+L++Q ++E R+LLT+D KLLR + + N
Sbjct: 371 CDVMVEGLARQLRCVGVDAASSPTKKSDPRQLVEQATREGRILLTKDIKLLRRRLMPDNL 430
Query: 421 IYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRI 480
Y VK K +QL EV+E FQ+ +SE +L+SRC KCNG F +PL++ EA A Q I
Sbjct: 431 SYFVKKSGKWEQLEEVMEVFQITVSESELLSRCVKCNGEFTPRPLTSIEAKAQAPATQDI 490
Query: 481 PDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVC 518
P + + ++WQC C L+W+GTQ+ A Q+F VC
Sbjct: 491 PTSVLETCEEYWQCSMCGHLFWQGTQFTRARQQFAAVC 528
>gi|302807740|ref|XP_002985564.1| hypothetical protein SELMODRAFT_122415 [Selaginella moellendorffii]
gi|300146770|gb|EFJ13438.1| hypothetical protein SELMODRAFT_122415 [Selaginella moellendorffii]
Length = 442
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/187 (51%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
Query: 317 KKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVG 376
KKK R R + D+ + +W GPPPWD +GGDG PKFLCD+M+EGLA+ LRCVG
Sbjct: 255 KKKIRTRR--VRDTNRSQGQAEFEWCGPPPWDPVVGGDGCPKFLCDIMIEGLARQLRCVG 312
Query: 377 IDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEV 436
IDAA P KP+ R+LI+Q +E R+LLTRD KLLR + + NQ YRVK L K +QL E+
Sbjct: 313 IDAACPHRLKPDARQLIEQAQREGRILLTRDVKLLRQRLIPSNQAYRVKHLTKKEQLTEI 372
Query: 437 IEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMD 496
IE F L +SE+ L+SRCT+CNG KPL+ ++A AA + D L L FWQC +
Sbjct: 373 IETFHLTVSEEHLLSRCTRCNGELCPKPLTAQQAKAAAPNQKISEDVLLQDGLLFWQCSE 432
Query: 497 CNQLYWE 503
C LYW+
Sbjct: 433 CRHLYWQ 439
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 12/206 (5%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P I LV S + F AL +SS++ LDAEWKP PRVSLLQ+AC+ F
Sbjct: 12 PSSIRLVDSIDGEAFQGFLLALQESSVIALDAEWKPVLV-AGMHPRVSLLQIACRKR-DF 69
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
PESD +VF++D+ SIP ++ + L+E + ILKLGFK +QDLI L+++ S
Sbjct: 70 GPESD-----LVFIVDVLSIPASALLQPLEEALETSRILKLGFKLRQDLINLAASLSSTA 124
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
F EPY+DI +Y+ + K RKLP +T SL++IC+++ L K LQCSDW
Sbjct: 125 ---SFS-CEPYIDIGKLYHEVKRKN-PRKLPGDTPSLSHICRDVFGRPLCKSLQCSDWEL 179
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQ 213
RPLTEEQ +YAA DAHCL+ I +
Sbjct: 180 RPLTEEQISYAAADAHCLLAILDALH 205
>gi|72388621|gb|AAZ67953.1| At5g24340-like protein [Arabidopsis lyrata]
Length = 163
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 124/169 (73%), Gaps = 6/169 (3%)
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS RPLTEEQ
Sbjct: 1 VKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLTEEQ 60
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRF 254
K YAA DAHCL++IF++F K + I+ DS ++GL+ IL + D +K V
Sbjct: 61 KLYAATDAHCLLQIFDVF------KAHLVEGITVQDSREKNVGLQEILTESDYSSKIVTA 114
Query: 255 KLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEK 303
KLC+A D+IR+ S Q + VVSR + LNTMPMDE+L+KI RKYGE+
Sbjct: 115 KLCKATDVIRSMSENGQNIANRVVSRKTTLNTMPMDENLLKIFRKYGER 163
>gi|72388593|gb|AAZ67939.1| At5g24340 [Arabidopsis thaliana]
gi|72388595|gb|AAZ67940.1| At5g24340 [Arabidopsis thaliana]
gi|72388597|gb|AAZ67941.1| At5g24340 [Arabidopsis thaliana]
gi|72388599|gb|AAZ67942.1| At5g24340 [Arabidopsis thaliana]
gi|72388601|gb|AAZ67943.1| At5g24340 [Arabidopsis thaliana]
gi|72388603|gb|AAZ67944.1| At5g24340 [Arabidopsis thaliana]
gi|72388609|gb|AAZ67947.1| At5g24340 [Arabidopsis thaliana]
gi|72388611|gb|AAZ67948.1| At5g24340 [Arabidopsis thaliana]
Length = 163
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 126/169 (74%), Gaps = 6/169 (3%)
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS RPLTEEQ
Sbjct: 1 VKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLTEEQ 60
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRF 254
K YAA DAHCL++IF++F+ + + I+ D +++GL+ IL + D +K V
Sbjct: 61 KLYAATDAHCLLQIFDVFEAHLVE------GITVQDLRVINVGLQEILTESDYSSKIVTV 114
Query: 255 KLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEK 303
KLC+A D+IR+ S Q + GVV R + LNTMPMDE+L+KIVRK+GE+
Sbjct: 115 KLCKATDVIRSMSENGQNIANGVVPRKTTLNTMPMDENLLKIVRKFGER 163
>gi|72388605|gb|AAZ67945.1| At5g24340 [Arabidopsis thaliana]
gi|72388607|gb|AAZ67946.1| At5g24340 [Arabidopsis thaliana]
Length = 163
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 125/169 (73%), Gaps = 6/169 (3%)
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS RPLTEEQ
Sbjct: 1 VKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLTEEQ 60
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRF 254
K YAA DAHCL++IF++F+ + + I+ D +++GL+ IL + D +K V
Sbjct: 61 KLYAATDAHCLLQIFDVFEAHLVE------GITVQDLRVINVGLQEILTESDYSSKIVTV 114
Query: 255 KLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEK 303
KLC+A D+IR+ S Q + GVV R LNTMPMDE+L+KIVRK+GE+
Sbjct: 115 KLCKATDVIRSMSENGQNIANGVVPRKMTLNTMPMDENLLKIVRKFGER 163
>gi|72388613|gb|AAZ67949.1| At5g24340 [Arabidopsis thaliana]
gi|72388615|gb|AAZ67950.1| At5g24340 [Arabidopsis thaliana]
gi|72388617|gb|AAZ67951.1| At5g24340 [Arabidopsis thaliana]
gi|72388619|gb|AAZ67952.1| At5g24340 [Arabidopsis thaliana]
Length = 163
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 125/169 (73%), Gaps = 6/169 (3%)
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS RPLTEEQ
Sbjct: 1 VKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLTEEQ 60
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRF 254
K YAA DAHCL++IF++F+ + + I+ D +++GL+ IL + +K V
Sbjct: 61 KLYAATDAHCLLQIFDVFEAHLVE------GITVQDLRVINVGLQEILTESYYSSKIVTV 114
Query: 255 KLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEK 303
KLC+A D+IR+ S Q + GVV R + LNTMPMDE+L+KIVRK+GE+
Sbjct: 115 KLCKATDVIRSMSENGQNIANGVVPRKTTLNTMPMDENLLKIVRKFGER 163
>gi|147801797|emb|CAN72321.1| hypothetical protein VITISV_000999 [Vitis vinifera]
Length = 155
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 106/125 (84%), Gaps = 3/125 (2%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+IHLV S +SPEFT L ++L+QSSL+GLDAEWKP R+ QS+FP VSLLQLACQ PR P
Sbjct: 4 EIHLVASIDSPEFTLLTQSLTQSSLIGLDAEWKPIRTQQSSFPTVSLLQLACQLXPRLGP 63
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
+S +S +VFL DLS+I L SI+ELL+++FVSPD+LKLGF+FKQDLIYLSSTFCSQGCD
Sbjct: 64 DSAKS---LVFLXDLSAIXLSSIYELLRDVFVSPDVLKLGFRFKQDLIYLSSTFCSQGCD 120
Query: 130 IGFDR 134
GFDR
Sbjct: 121 PGFDR 125
>gi|125600096|gb|EAZ39672.1| hypothetical protein OsJ_24105 [Oryza sativa Japonica Group]
Length = 219
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 117/218 (53%), Gaps = 41/218 (18%)
Query: 9 LKIHLVTST-ESPEFTHLARALSQSSLVGLDAEWKPQRSHQS----------------NF 51
L +HLVT SPE L R+L+ + +V LDAEWKP+R + F
Sbjct: 14 LAVHLVTGGGSSPEHALLLRSLAAARVVALDAEWKPRRRGPAVADDPSAAAAATPPPLQF 73
Query: 52 PRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFK 111
P V+LLQ+AC+ + E L+ELF P++LKLGF+
Sbjct: 74 PTVTLLQVACR--------------------GDGDGGGAAAAEPLRELFERPEVLKLGFR 113
Query: 112 FKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKE 170
FKQDL+YLS+TF + G GF+RVEP+LD+T+ Y +L + ++LP+ETKSLA IC+E
Sbjct: 114 FKQDLVYLSATFAAALGSSAGFERVEPFLDVTNAYYYLKGHDMQKRLPRETKSLATICEE 173
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
LL + LSK L R + +++ I +H I +
Sbjct: 174 LLGVYLSKSLAI---YARAIESAYQSFHGIQSHTPIAL 208
>gi|307106303|gb|EFN54549.1| hypothetical protein CHLNCDRAFT_135337 [Chlorella variabilis]
Length = 508
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 346 PW-DLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-----LIDQTSKE 399
PW D G G P+F+CDVM EGLA+ LR G DA + + PR ++++ E
Sbjct: 321 PWLDAQRGLTGTPRFVCDVMAEGLARQLRLCGFDAESLAGMEKLPRHAIYRAMVERAEGE 380
Query: 400 KRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGR 459
RV+LTRD + Y +Q Y V + K +QL +V+ AF L ++L++RC +CNG
Sbjct: 381 GRVVLTRDRTFISAAYC--DQAYLVTADTKRRQLEQVLGAFGLTPQREELLTRCARCNGE 438
Query: 460 FIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
F+ +PL E +P + ++ +FW C C+ +YW+G QY A+ + +
Sbjct: 439 FLAEPLPAALLPEG----HGVPPGIQEQEREFWVCARCSGVYWQGGQYARAMGQMTHL 492
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
+ S + V LLDL +P ++ + L+ LF S LKLG+ DL +++ +G
Sbjct: 44 GASARSSTSCCVLLLDLLRLPQAAVKQALQALFRSRGCLKLGWGLVHDLRAIAAALGGEG 103
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
V+P D+ S++ L H+ G + + L+ + + L L K+LQ
Sbjct: 104 GSC-IAVVDPACDLGSMHRFLRHR--GARGAVDL-GLSGLVEAQLGRPLDKQLQ------ 153
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
PL+ EQ+ YAA DA CL+ + F V Q
Sbjct: 154 -PLSAEQRRYAAADAACLLALLGSFVAAVGQ 183
>gi|194691416|gb|ACF79792.1| unknown [Zea mays]
Length = 160
Score = 103 bits (256), Expect = 3e-19, Method: Composition-based stats.
Identities = 70/161 (43%), Positives = 88/161 (54%), Gaps = 30/161 (18%)
Query: 1 MDCTYRKPLKIHLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQR-------------- 45
MD P +HLVT S L R+L+ + +V LDAEWKP+R
Sbjct: 1 MDHAPAPPFAVHLVTGGGSSSGIALLLRSLAAARVVALDAEWKPRRRGSPAAADPAALGD 60
Query: 46 -----SHQS----NFPRVSLLQLACQPGPRFNPESDESNA-SVVFLLDLSSIPLPSIWEL 95
S S FP V+LLQ+AC RF+ S VF++DL S+PL +W
Sbjct: 61 DTTPASETSPAPPKFPTVTLLQVAC----RFSDGGGGEGERSEVFVVDLLSVPLADLWAP 116
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRV 135
L+ELF P+ LKLGF+FKQDL+YLSSTF + GCD GFDRV
Sbjct: 117 LRELFERPETLKLGFRFKQDLVYLSSTFSAALGCDSGFDRV 157
>gi|414589141|tpg|DAA39712.1| TPA: hypothetical protein ZEAMMB73_184842 [Zea mays]
Length = 274
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 86/162 (53%), Gaps = 30/162 (18%)
Query: 1 MDCTYRKPLKIHLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQR-------------- 45
MD P +HLVT S L R+L+ + +V LDAEWKP+R
Sbjct: 115 MDHAPAPPFAVHLVTGGGSSSGIALLLRSLAAARVVALDAEWKPRRRGSPAAADPAALGD 174
Query: 46 ---------SHQSNFPRVSLLQLACQPGPRFNPESDESNA-SVVFLLDLSSIPLPSIWEL 95
FP V+LLQ+AC RF+ S VF++DL S+PL +W
Sbjct: 175 DTTPASETSPAPPKFPTVTLLQVAC----RFSDGGGGEGERSEVFVVDLLSVPLADLWAP 230
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRVE 136
L+ELF P+ LKLGF+FKQDL+YLSSTF + GCD GFDRV
Sbjct: 231 LRELFERPETLKLGFRFKQDLVYLSSTFSAALGCDSGFDRVR 272
>gi|328776161|ref|XP_391887.3| PREDICTED: probable exonuclease mut-7 homolog [Apis mellifera]
Length = 954
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 203/452 (44%), Gaps = 62/452 (13%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L + L S+VG+D+EWKP + ++L+Q+A + V+++D+
Sbjct: 406 LDKGLDGVSIVGIDSEWKPCFGTKQ--TELALIQIATKDN--------------VYIIDV 449
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF--CSQGCDIGFDRVEPYL 139
+++ +W +L LF + +ILKLGF QD+ + S+ S+ G + YL
Sbjct: 450 TTMGNKFTELWAKLALVLFENKNILKLGFGIAQDMTVIRSSLPALSKIKIYG----QGYL 505
Query: 140 DITSIYNHLHHKQLGRKLPKET------KSLANICKELLDISLSKELQCSDWSNRPLTEE 193
DI +++ L + P E+ K+L+ + + L L+K Q S+W RPL E
Sbjct: 506 DIVNLWKKLV-EDYKFVFPHESDDQFTKKNLSKLVELCLGQKLNKSDQFSNWEQRPLRES 564
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVR 253
Q YAA+DA+CL+EI+ +++ C + E+ + L L+ I K K +R
Sbjct: 565 QIIYAALDAYCLLEIYATLEIQ-------CEHL-EIPFDDACLELQHIPFKSS-SQKNIR 615
Query: 254 FKLCEALDIIRATSY-----YSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKIL-LR 307
+L + + + Y + + LP + LN S I +I+ L
Sbjct: 616 -RLAQKSHVSKNKGYDKQQNFQRDLPTQKLRNFRKLNYQNHHISNKSIQSTLSMRIMNLN 674
Query: 308 ECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEG 367
E K++ K++ V+++ +++ ++ W + +CD M+ G
Sbjct: 675 ESHNISKSTCHYT-KQTEFHVNNKSLDIENFI-YKKIHTW----------RVVCDSMLGG 722
Query: 368 LAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH-QYLIKNQIYRVKS 426
L LR G D + R + +EKRV LTR+ L+ QY+ Y V S
Sbjct: 723 LTNKLRMCGCDCVHFAFDQGGER-CVKLAMREKRVFLTRNKGYLKFLQYIPSEDCYFVLS 781
Query: 427 LLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG 458
++QL EV+ F++ ++ + + SRC CN
Sbjct: 782 DTPDEQLREVLNHFKIAVTHNDIFSRCQACNS 813
>gi|380016821|ref|XP_003692371.1| PREDICTED: LOW QUALITY PROTEIN: probable exonuclease mut-7 homolog
[Apis florea]
Length = 938
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 195/459 (42%), Gaps = 76/459 (16%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L + L S+VG+D+EWKP + ++L+Q+A + V+++D+
Sbjct: 390 LDKGLDGISIVGIDSEWKPCFGTKQ--TELALIQIATKDN--------------VYIIDV 433
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF--CSQGCDIGFDRVEPYL 139
+++ +W +L LF + ILKLGF QD+ + S+ S+ G + YL
Sbjct: 434 TTMGNKFTELWAKLALVLFENKSILKLGFGIAQDMTVIRSSLPALSKIKIYG----QGYL 489
Query: 140 DITSIYNHLHHKQLGRKLPKET------KSLANICKELLDISLSKELQCSDWSNRPLTEE 193
DI +++ L + P E+ K+L+ + + L L+K Q S+W RPL E
Sbjct: 490 DIVNLWKKLV-EDYKFVFPHESDDQFTKKNLSKLVELCLGQKLNKSDQFSNWEQRPLRES 548
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKG----NSCSSISELD-SSNLDLGLKGILEKPDIG 248
Q YAA+DA+CL+EI+ +++ ++C + + S+ ++ + +K +G
Sbjct: 549 QIIYAALDAYCLLEIYATLEIQCEHLEIPFYDACLELQHIPFKSSSQKNIRRLTQKSHLG 608
Query: 249 -----NKTVRFKL---CEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKY 300
+K F+ E L R + + + + + TM ++ES
Sbjct: 609 KNKRYDKQQNFQKDLPTEKLRNFRKLNCQNHHISNKSIQSTLSMRTMNLNES-------- 660
Query: 301 GEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFL 360
I C +T K +D + I W + +
Sbjct: 661 -HNINKSTCHYTKQTEYHVNNKS----LDIEKFIYKKIHTW----------------RVV 699
Query: 361 CDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH-QYLIKN 419
CD M+ GL LR G D + R + +EKRV LTR+ L+ QY+
Sbjct: 700 CDSMLGGLTNKLRMCGCDCVHFAFDQGGER-CVKLAMREKRVFLTRNKGYLKFLQYIPSE 758
Query: 420 QIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG 458
Y V S ++QL EV+ F++ ++ + + SRC CN
Sbjct: 759 DCYFVLSDTPDEQLREVLNHFKIAVTHNDIFSRCQACNS 797
>gi|294868076|ref|XP_002765369.1| hypothetical protein Pmar_PMAR002368 [Perkinsus marinus ATCC 50983]
gi|239865388|gb|EEQ98086.1| hypothetical protein Pmar_PMAR002368 [Perkinsus marinus ATCC 50983]
Length = 1005
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 212/528 (40%), Gaps = 96/528 (18%)
Query: 11 IHLVTSTESPEFTHLARAL-SQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+HL+T+ E L ++ +++GLD+EW S+ +L PG
Sbjct: 448 VHLITTVS--ELKQLISEWEAERTIIGLDSEW-------------SIFRLVLDPGCNQAD 492
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
+ + V+L+D+ + I E+ + L S +I+ +GF DL L S+ +G
Sbjct: 493 LVQLATSDNVYLVDIYAGEEGLIDEIGR-LVESNNIIVVGFGIAGDLRVLRSSGM-EGTR 550
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
G +D+ + + + G K + L + K L LSK ++ S+W RP
Sbjct: 551 GGVSSPHRIVDLNDLVDGYLPSRKGSS--KHQRGLTEVVKYFLGKPLSKVMRLSNWRRRP 608
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSIS-ELDSSNLDLGLKGILEKPDIG 248
L+ Q YA++DA L++ Q SSI LD N D K
Sbjct: 609 LSYRQVEYASLDAIVLLKCIEKIQ----------SSIDPSLDLWNTDAAPK--------- 649
Query: 249 NKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRE 308
+ +P VSRVS D + + E +LL +
Sbjct: 650 ----------------RRHVPANNIPTLGVSRVS-------DGAAEESDTTEEEDLLLSD 686
Query: 309 CDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPP---------------WDLSLGG 353
+P+ + RSS ++ E G+ + P P W L G
Sbjct: 687 NSPSPRRNATMDDARSSTYRNTAEA-----GNSRNPTPGETREEGEYDKEEIDWSLYFNG 741
Query: 354 DGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
+ PK +C + L + LR +G+D S P E I +T + + V++ K+ +
Sbjct: 742 E-EPKLVCPGGMGRLVRKLRGLGVDTLELDSCDPATLEYIAET-QHRAVVVNYRTKISKR 799
Query: 414 QYL--IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAV 471
++ +K + ++QL V++ F++++ D L+ RC CN R + T +
Sbjct: 800 RWCNGVKCYVLPESCSTMDEQLNAVMQEFKVEVDPDSLLGRCVACNAR---DWIVTTDKD 856
Query: 472 EAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAV---QKFID 516
Q + L++K F+ C C ++YWEG + AV +KF++
Sbjct: 857 MVKHEVQPMTLKLYNK---FYVCGGCGKVYWEGVMFEKAVTHLRKFVN 901
>gi|145550275|ref|XP_001460816.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428647|emb|CAK93419.1| unnamed protein product [Paramecium tetraurelia]
Length = 720
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KFL D M++ LA LR +GIDA ++K + + + Q E+RV++TRD KL L
Sbjct: 558 KFLVDAMLKKLATFLRNLGIDAEY--NEKNDHQTIEQQAIAEQRVIITRDKKLYEKPQLK 615
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN-GRFIQKPLSTEEAVEAAKG 476
+L QQ E+++ Q +I E++++SRC KCN IQ T + K
Sbjct: 616 APCFLLSDNLNTEQQFEEILKELQFQIYENKILSRCVKCNFDHVIQISPKTAQQYLDFKN 675
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCK 519
+ F + FWQC C Q+YWEG Q+ N++Q+F V K
Sbjct: 676 -----NDSFGQIQVFWQCEKCLQVYWEGNQFKNSIQRFTKVAK 713
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDI 130
S E+N ++ + +L + + L F S I K+G D T +Q ++
Sbjct: 377 STENNVYIIDIFNLRE--KLELLQFLNNYFASNKI-KIGHSVWNDF-----TVMAQNMNL 428
Query: 131 GFDRVEP--YLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
VEP +D+T +YN + + K SLAN +L LSK+ S+W R
Sbjct: 429 D-QTVEPKNIVDLTFLYNEVFPEN------KNNVSLANQVYQLFGKKLSKKECFSNWQRR 481
Query: 189 PLTEEQKNYAAIDAHCLIEIF 209
PL + Q +Y A+DA+ I ++
Sbjct: 482 PLRKCQLHYGAMDAYICIALY 502
>gi|427785563|gb|JAA58233.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 598
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 25/195 (12%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
+VG+DAEWKP + R+SL+QLA N V+ +L LS I W
Sbjct: 380 VVGIDAEWKPTMGLTPS--RLSLVQLAVW-----------DNVYVLDMLKLSEILSEEQW 426
Query: 94 -ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH--- 149
+L ++ S +ILKLGF +DL L+ T G +V+ +D+ S L
Sbjct: 427 GQLYTDVLSSNEILKLGFGIAEDLKLLAETIKLPG-----GKVQNVVDLCSFAEKLRCDC 481
Query: 150 HKQLGRKLPKET--KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIE 207
+ +PKE K L+ + + LL + L+K+ QCSDW NRPL + Q YAA+DA CL++
Sbjct: 482 PTLMKPVVPKERGHKGLSELTRTLLGLPLNKDEQCSDWENRPLRQSQMKYAALDAFCLLQ 541
Query: 208 IF-NIFQVKVAQKGN 221
++ +++ AQ+ N
Sbjct: 542 LYEELYKRADAQQIN 556
>gi|270003369|gb|EEZ99816.1| hypothetical protein TcasGA2_TC002596 [Tribolium castaneum]
Length = 1249
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IHL+ S ES E L L +VG+D EWKP Q N ++L+Q+A +
Sbjct: 758 IHLIDSEESFE-RFLDGGLQDVEVVGIDCEWKPNFGSQKN--ELALMQIASRKN------ 808
Query: 71 SDESNASVVFLLDLSSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
VF+LD+ SI +P +W EL K LF + DILKLGF F D++ + +
Sbjct: 809 --------VFILDIISIGTKVPHLWQELGKFLFNNCDILKLGFGFTSDILMIKHSLP--- 857
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETK----SLANICKELLDISLSKELQCS 183
++ F + L K LP E + SL + + L L K Q S
Sbjct: 858 -ELNFTPKQVGFLDLLSLWKLLEKYPKVVLPYEVQGSGPSLGTLVNQCLGRPLDKSDQFS 916
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+W RPL Q YAA+DA+CLIE++++ +
Sbjct: 917 NWEKRPLRNSQLVYAALDAYCLIEVYDVIK 946
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLR-HQYL 416
K +CD M++GL K+LR GID A + + E + E+R +LT+ + + Y+
Sbjct: 1008 KVVCDTMLQGLGKNLRRCGIDTAILENYM-DHMECVRYAQDEQRYILTKGNVFNKLYGYV 1066
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGR-FIQKPLSTEEAV-EAA 474
RV S ++QL E ++ +++ ++ + + S C CNGR FI+ ST A+ ++
Sbjct: 1067 PLGHCLRVNSDNVDEQLKEFVDYYKVNVTVNDVFSVCQSCNGRSFIKVSRSTMLALTQSQ 1126
Query: 475 KGFQRIP 481
Q +P
Sbjct: 1127 NSLQYVP 1133
>gi|221635812|ref|YP_002523688.1| hypothetical protein trd_A0406 [Thermomicrobium roseum DSM 5159]
gi|221157529|gb|ACM06647.1| protein of unknown function [Thermomicrobium roseum DSM 5159]
Length = 274
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 13/150 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+CDV + LA +LR +G D T ++ + L+ +E+R++LTRD +LL+ + +
Sbjct: 100 PRFICDVHLGRLAAYLRLLGFD--TRYEREADDATLVAWAERERRIVLTRDRELLKRRAV 157
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
Y ++S +QLLEV+ F L + + RC +CNG + L E A
Sbjct: 158 THG--YWLRSAHPREQLLEVVRRFDL-VGSLRPFVRCPRCNGLLV---LVDREVARA--- 208
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
+P + + +FW+C CNQ YW GT
Sbjct: 209 --HVPPRSWQRAQEFWRCSGCNQFYWYGTH 236
>gi|118361377|ref|XP_001013917.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89295684|gb|EAR93672.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1490
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 94/159 (59%), Gaps = 10/159 (6%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
PKF+ D M+ L K+LR GID+ + K + + D ++KE+R++LTR++K + Q L
Sbjct: 1315 PKFIVDNMLYKLVKYLRNSGIDSTFLQDKNY--KLICDLSNKEERIILTRNSKFFK-QIL 1371
Query: 417 IKNQIYRVKSLLKNQ-QLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ ++ ++ + Q E++ F++++ + ++SRC KCNG ++ +S+E+A +
Sbjct: 1372 CQAPVFLIQETTNTENQFKEILNFFKIQVDDGMILSRCIKCNGDKLE-IISSEQAHKYVD 1430
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
+ P+ + QF+QC C Q+YWEG ++ + ++F
Sbjct: 1431 FYN--PNY---SDFQFFQCASCKQVYWEGEKFKRSKERF 1464
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 8/147 (5%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KFL D M+ L K+LR GIDAA K + + L D + +E+RV++TRD KL + I
Sbjct: 616 KFLIDNMLFKLVKYLRNSGIDAAYITEK--DYQLLQDLSLREERVVVTRDNKLFNMKKSI 673
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
I + ++L +Q E+I+ F++ ++ L+SRC KCN + +S E A++ K F
Sbjct: 674 PVYILQ-ENLDTEKQFQEIIKFFKINQNKLNLLSRCVKCNNDNL-VIISAEVAMQHLK-F 730
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEG 504
D F+K ++WQC C Q+YWEG
Sbjct: 731 THPQD--FNK-FEYWQCTQCKQVYWEG 754
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 35/219 (15%)
Query: 15 TSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPR--VSLLQLACQPGPRFNPESD 72
T + F + + + S +VG D+E+ Q + F + VS++QLA Q
Sbjct: 379 TKEQKQIFQEVEKTILNSKIVGFDSEFASQWNK---FEKGGVSIIQLAVQNK-------- 427
Query: 73 ESNASVVFLLDLSSIPL----PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
+++ D ++ + + K LF S I+K G DL + TF S+
Sbjct: 428 ------IYIFDALNLLVNKFSQEFFNFCKTLFESKQIIKAGHSISTDLNEMEKTFKSEK- 480
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
FD + ++DI + + T SL + ++LL++ +SK Q S+W R
Sbjct: 481 --KFD-LNNFVDIALLNRDIFS-------LANTASLKFMVQKLLNLQMSKFEQISNWDRR 530
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSIS 227
PL + Q +YAA+DA +I+++ V++ Q G + + ++
Sbjct: 531 PLRKSQIHYAAVDAFIVIKLYEKL-VQIQQAGGALNYVN 568
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 25/184 (13%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ +F L++S L+G D+E+ P R ++ ++ LQLA +N +
Sbjct: 1113 NQDFKIAVEILTKSKLIGFDSEFIP-RWNKFEKGGIATLQLA-------------TNNKI 1158
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+ + + + LF + +ILK+G QD+ + TF ++ +++ +
Sbjct: 1159 FIFDTIKLLENEQFLDFVTYLFENENILKIGHSIWQDINEMDKTFKAKKEM----KIKSF 1214
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
D+ IY + + SL +C ++L +SK Q SDWS RPL + Q +YA
Sbjct: 1215 QDVGIIYKEALN-------LENVSSLKQMCYQILKQKISKYEQISDWSKRPLRKCQIHYA 1267
Query: 199 AIDA 202
A+DA
Sbjct: 1268 ALDA 1271
>gi|414589142|tpg|DAA39713.1| TPA: hypothetical protein ZEAMMB73_184842 [Zea mays]
Length = 135
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 7/75 (9%)
Query: 293 LVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDI---GDWQGPPPWDL 349
L+ IV KY EKI+L E D P+TS++K + + + + KR D++ +WQGPPPWD
Sbjct: 37 LMSIVTKYSEKIILTESDAKPRTSRRKEKLK----IPANAKRKDNVDCSSEWQGPPPWDP 92
Query: 350 SLGGDGYPKFLCDVM 364
S+GGDGYPKFLCDVM
Sbjct: 93 SIGGDGYPKFLCDVM 107
>gi|414589143|tpg|DAA39714.1| TPA: hypothetical protein ZEAMMB73_184842, partial [Zea mays]
Length = 50
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/43 (69%), Positives = 39/43 (90%)
Query: 480 IPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
IP CLF++NL+FW+C DCNQLYWEGTQYHNAVQ+F+ VC +++
Sbjct: 8 IPTCLFNRNLEFWKCTDCNQLYWEGTQYHNAVQRFLSVCNISD 50
>gi|301100864|ref|XP_002899521.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103829|gb|EEY61881.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1101
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 92/202 (45%), Gaps = 39/202 (19%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+GLDAEW+P S + + S+LQ+AC VF+ D + + + E
Sbjct: 922 LGLDAEWRPD-SRATVPSKCSILQVACD--------------DYVFIFDFMEMAIGDLEE 966
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT-SIYNHLHHKQL 153
L + LF S I+K+GF D+ L +F C FD LD + + H
Sbjct: 967 LFEHLFTSDTIVKIGFAINGDIKRLRWSFPEVKC---FDTFVNVLDFSFDTFVATTHLAD 1023
Query: 154 GRKLPKET----------------KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
G +P ++ K L+ K+ L++ LSK Q SDW RPLT +Q Y
Sbjct: 1024 GTIIPTQSDDTSSLDKLQRRRRRQKGLSTYIKQALELPLSKLQQKSDWERRPLTTQQVGY 1083
Query: 198 AAIDAHCLIEIFNIFQVKVAQK 219
AA+DA+CL+ + Q VA K
Sbjct: 1084 AALDAYCLL----MLQDAVASK 1101
>gi|449015749|dbj|BAM79151.1| unknown ribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1224
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 88/190 (46%), Gaps = 34/190 (17%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW- 93
VGLD EW+P R+ PR +LLQ+A F + VFL+DL I +++
Sbjct: 588 VGLDVEWRPVRTSGLQ-PRCALLQIA------FPAD--------VFLVDLLRIDADALFA 632
Query: 94 ----ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH-- 147
E L+ LF SP ILK+GF F D + L ++ C FD + D+ I +
Sbjct: 633 MRLNEALRRLFRSPAILKVGFCFSSDFVRLRHSYLGLSC---FDAIVALRDLDRIGSEGT 689
Query: 148 ---------LHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
L + R+ + T LA + L + K +CSDW RPLT Q YA
Sbjct: 690 DAFCADLATLVGRTSVRRRGRLTVGLAQLVAVFLGRAFDKRPRCSDWEARPLTRAQIEYA 749
Query: 199 AIDAHCLIEI 208
A+DA L+ +
Sbjct: 750 ALDAWVLLAL 759
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATPRSKK---------PEPRELIDQTSKEKRVLLT 405
GY F+ D + GL + LR +G+D K ++ ++ + RV+LT
Sbjct: 1051 GY--FVVDSTMGGLVRRLRALGLDVLHTCGKDLALLFELVWTREEDVRSPSASKPRVILT 1108
Query: 406 RDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN-GRFIQKP 464
RDA +L Y V S Q EV+ F+L + + ++RC +CN RF Q+
Sbjct: 1109 RDADVLARATRYGVPCYYVSSTKTESQAREVLGKFRLSPAPENFLARCIQCNCARFEQR- 1167
Query: 465 LSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCK 519
+ E V+ +P + F++C C+QLYW+G + A ++ ++ +
Sbjct: 1168 --SREEVQTL-----LPQRTVNSFHIFYECARCHQLYWKGAHFTRATRQLEELVR 1215
>gi|347541324|ref|YP_004848750.1| hypothetical protein NH8B_3586 [Pseudogulbenkiania sp. NH8B]
gi|345644503|dbj|BAK78336.1| protein of unknown function [Pseudogulbenkiania sp. NH8B]
Length = 267
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 356 YPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQY 415
+P F+ DV + LA++LR +G+D R+ P+ EL E R+LLTRD LL+
Sbjct: 102 HPSFVLDVHLGRLARYLRLLGLDTLY-RNDWPD-EELAQVALAEHRILLTRDVGLLKRNA 159
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ R +++ +QLLEV+E F L + +L SRC +CNG EAV A
Sbjct: 160 VTHGAFLR--AIMPREQLLEVLERFDL-WRQLRLFSRCARCNGAI--------EAVTRAS 208
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
P ++ F++C C +LYWEG
Sbjct: 209 VAAETPPRVYAYQRHFYRCQSCRKLYWEGKH 239
>gi|224823783|ref|ZP_03696892.1| protein of unknown function DUF82 [Pseudogulbenkiania ferrooxidans
2002]
gi|224604238|gb|EEG10412.1| protein of unknown function DUF82 [Pseudogulbenkiania ferrooxidans
2002]
Length = 267
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 356 YPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQY 415
+P F+ DV + LA++LR +G+D R+ P+ EL E R+LLTRD LL+
Sbjct: 102 HPCFVLDVHLGRLARYLRLLGLDTLY-RNDWPD-EELAQVALAEHRILLTRDVGLLKRNA 159
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ R +++ +QLLEV+E F L + +L SRC +CNG EAV A
Sbjct: 160 VTHGAFLR--AIMPREQLLEVLERFDL-WRQLRLFSRCARCNGAI--------EAVTRAS 208
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
P +F F++C C +LYWEG
Sbjct: 209 VAAETPPRVFAYQRHFYRCQSCRKLYWEGKH 239
>gi|282164119|ref|YP_003356504.1| hypothetical protein MCP_1449 [Methanocella paludicola SANAE]
gi|282156433|dbj|BAI61521.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 172
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE---LIDQTSKEKRVLLTRDAKLLRHQY 415
FL D M+ L LR G D + +P P E LID E R+L++RD L+
Sbjct: 8 FLVDRMLGRLIAWLRIFGYDTKSALDMEPTPDEDTRLIDIAKAEGRILISRDRALIERAK 67
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
Q V S +QL +++E+++L I D M+RCT CN + +TEE +E K
Sbjct: 68 KAGVQTVLVSSDDVREQLEKLMESYRLDI--DPNMTRCTVCNATLRE---ATEEDIEKLK 122
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
+ +P+ L + W C C + YW+G+ + N ++
Sbjct: 123 NSEEVPEHLLNDKRTLWVCEKCGKAYWQGSHWRNILK 159
>gi|427779777|gb|JAA55340.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 626
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 45/241 (18%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
+H+V + + + +VG+DAEWKP + R+SL+QLA
Sbjct: 359 VHMVDTADG--LDTCIEVIKDYDVVGIDAEWKPTMGLTPS--RLSLVQLAVW-------- 406
Query: 71 SDESNASVVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF------ 123
N V+ +L LS I W +L ++ S +ILKLGF +DL L+ T
Sbjct: 407 ---DNVYVLDMLKLSEILSEEQWGQLYTDVLSSNEILKLGFGIAEDLKLLAETIKLPGGK 463
Query: 124 -----------------CSQGCDIGFDRVEPYLDITSIYNHLH---HKQLGRKLPKET-- 161
C + +V+ +D+ S L + +PKE
Sbjct: 464 VQNVVDLCSFAEKLRCDCPXTIKLPGGKVQNVVDLCSFAEKLRCDCPTLMKPVVPKERGH 523
Query: 162 KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF-NIFQVKVAQKG 220
K L+ + + LL + L+K+ QCSDW NRPL + Q YAA+DA CL++++ +++ AQ+
Sbjct: 524 KGLSELTRTLLGLPLNKDEQCSDWENRPLRQSQMKYAALDAFCLLQLYEELYKRADAQQI 583
Query: 221 N 221
N
Sbjct: 584 N 584
>gi|345806145|ref|XP_003435395.1| PREDICTED: probable exonuclease mut-7 homolog [Canis lupus
familiaris]
Length = 921
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 2 DCTYRKPLK---IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D Y+ P+ IH + S E H A L +VG+D EW+P P+ S++Q
Sbjct: 356 DGYYQPPISREDIHFLASWED-LARHEAELLQPGQVVGVDLEWRPSFG-TGGRPQASIMQ 413
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE-------LLKELFVSPDILKLGFK 111
+A VFLLDL + P+ + L+ +L P I KLG+
Sbjct: 414 VAV--------------GGRVFLLDLPLLSQPTGGQASQAFCRLVSQLLSDPSITKLGYG 459
Query: 112 FKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH---HKQLGRKLPKETKSLANIC 168
DL L ++ C + ++ LD+ ++ + LGR + + L+ +
Sbjct: 460 MAGDLRSLGAS-CPTLAHV-EKQLRGGLDLLQVHRQMRIADMPALGRGEARGLRGLSLLV 517
Query: 169 KELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L L K Q S+W RPL+EEQ YAA DA+CL+E++
Sbjct: 518 QQVLGRPLDKAQQLSNWDRRPLSEEQLVYAAADAYCLLEVYQTL 561
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G+D + + R + +E R++LT LR Q
Sbjct: 624 RVVCDNMLQGLARSLRCLGVDVLALGTDD-DHRRAAEVARQEGRIILTSGLPYHKLRAQV 682
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ SL QQ V++ F + ++ + SRC CN
Sbjct: 683 GAGRCLSVDCSLKARQQAKAVLKHFNVCVTHADIFSRCQACN 724
>gi|325186923|emb|CCA21467.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1069
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 20/175 (11%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+ +D+EW+P+ S +S + S++Q+AC+ D S F+ DL ++ + +
Sbjct: 905 IAIDSEWRPETSRKSMSSKCSIVQIACK---------DHS-----FIFDLMTLKMKDMET 950
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+ L S +I+KL + F+ DL L +F C F+ + +D+ L +
Sbjct: 951 MFAHLLQSTEIVKLVYNFQGDLKRLKYSFPEAAC---FEEIRNVVDLAKPDPILAAEN-- 1005
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L ++++ L+++ K L L K +Q SDW RPL+ Q YAA+DA+ L+ I+
Sbjct: 1006 -NLARKSRGLSDLAKSSLGFPLCKRMQRSDWEQRPLSSAQIEYAALDAYVLLMIY 1059
>gi|410926767|ref|XP_003976844.1| PREDICTED: probable exonuclease mut-7 homolog [Takifugu rubripes]
Length = 898
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 180/454 (39%), Gaps = 121/454 (26%)
Query: 31 QSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL- 89
+ +VG+D EW+P S+ +V+L+QLA +D+ VFLLD+ +
Sbjct: 366 EGGVVGVDMEWQPTFGCSSS-QQVALMQLAV---------TDQ-----VFLLDVCAEGFG 410
Query: 90 --PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF--------CSQGCDIGFDRVEPYL 139
P ++ LF S ++LKLG+ DL + ST+ +QG L
Sbjct: 411 QHPETVSFIRSLFSSKNVLKLGYSTSGDLRCVLSTWPQFSEEPLVTQG----------VL 460
Query: 140 DITSIYNHLHHKQLGRKL--PKET--------KSLANICKELLDISLSKELQCSDWSNRP 189
D+ +++ + ++ R KE K L+ + +++L L K Q S+W RP
Sbjct: 461 DLVNVHQKIQRSKVNRTQNGSKEVLVGEGSAEKGLSLLVQQVLGRPLDKREQMSNWKKRP 520
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGN 249
L Q YA DA+CL+E++ + L S+ GL PD
Sbjct: 521 LRASQIRYAVADAYCLLEVYTV-----------------LKSNPAHFGL------PD--- 554
Query: 250 KTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLREC 309
D+ +S S+ P ++ +I + G++ EC
Sbjct: 555 -----------DLQNISSRQSE----------KSKGKKPKEQQTEQIKQPQGKE----EC 589
Query: 310 DKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGLA 369
+A + S+ K ++ + D PP L + +CD M++GL
Sbjct: 590 QRAQRVSRPHSDKEKDLLCGEKPS-----ADSPPLPPQQL--------RVVCDNMLQGLG 636
Query: 370 KHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLL- 428
+ LRC+G+D + + R E RV+LT L +++Q+ + L
Sbjct: 637 RTLRCLGVDVVMLENSD-DHRVAAKLARAEGRVILTCGQPFLT----LRSQVGEGRCLSL 691
Query: 429 -----KNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
Q + V+ F ++++ + SRC CN
Sbjct: 692 DCSEKAKDQAVRVLRHFNVQLTPSDIFSRCQVCN 725
>gi|326435716|gb|EGD81286.1| hypothetical protein PTSG_11323 [Salpingoeca sp. ATCC 50818]
Length = 1526
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 346 PWDLSLGGDGYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLL 404
P LSL G P +F+ D + L + LRC G+D R LI + R++L
Sbjct: 1279 PKQLSLYEPGMPLRFIADKTLSRLVRWLRCAGVDIVMCREHGCG--NLIQAAHETGRIVL 1336
Query: 405 TRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKP 464
T K + + +++ + +S+ Q+ EV+ FQL + +SRCTKCN RF
Sbjct: 1337 TCSPKYAQRLHHVRHYLCSERSV--QAQMQEVVSHFQLVVDGSTFLSRCTKCNSRF---- 1390
Query: 465 LSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
E V + +P + K +W+C+ C Q+ W+G QY Q F
Sbjct: 1391 ----EHVAPEQVRDVVPAGVLKKVHDYWRCLGCRQVVWQGQQYAKVKQMF 1436
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 23/156 (14%)
Query: 53 RVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKF 112
RVS+LQ+A + +LD+ ++ + +LF P I+K+GF F
Sbjct: 654 RVSILQIA--------------RHDALVILDMLALEPAHFHAFVTDLFADPAIIKVGFAF 699
Query: 113 KQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELL 172
D+ L TF C F + LD+ S + L PK + L + + +
Sbjct: 700 DGDMKMLRKTFPDAEC---FSTLRSLLDLQSFRH-----ALTSAGPK-SGGLKELVRHFM 750
Query: 173 DISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
L K Q S+W+ RPLT Q +YAA+DAH + +
Sbjct: 751 HKPLDKTEQMSNWNRRPLTPSQLHYAALDAHVCVSL 786
>gi|303272145|ref|XP_003055434.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463408|gb|EEH60686.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 590
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 33/186 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLP--- 90
+VGLD EWKP S P VS+LQ+A + + F++DL + P
Sbjct: 124 VVGLDGEWKPG----SRTP-VSILQVATR--------------ADAFVVDLFATAPPDAP 164
Query: 91 ---SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS-QGCDIGFDRVEP--YLDITSI 144
++ L +L S I KLGF F DL + +++ + +G +P +D+ +
Sbjct: 165 ASDALDAFLADLLGSERIYKLGFSFGYDLSRMRASYPHLRSLRVGAGHPQPRAMIDVKQV 224
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
N ++ ++ LA + K L +LSK QCSDWS RPLT Q +YAA DA
Sbjct: 225 ANVASANRMNTRV-----GLATLTKFTLGATLSKAEQCSDWSRRPLTAAQLSYAAADAFY 279
Query: 205 LIEIFN 210
L IF+
Sbjct: 280 LCVIFD 285
>gi|428172826|gb|EKX41732.1| hypothetical protein GUITHDRAFT_112147 [Guillardia theta CCMP2712]
Length = 1559
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KFL D M+ K LRC+G+D A + + + +I ++E RVLLTRD KL+
Sbjct: 1361 KFLADTMLGRTVKWLRCIGVDTALYEGNR-DAQTIISLAAREGRVLLTRDRKLISKP--C 1417
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y V S E+I++F L S M+RC+KCN ++ TEE ++
Sbjct: 1418 GGLCYFVPSNDAKAGFHEIIDSFGLSFSPKTFMARCSKCNTSNYKR--LTEEEIKELFDE 1475
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
+IP K +++ CM C +++W+G NA + V ++NE
Sbjct: 1476 GQIPSSCKVKVSKYYMCMGCKKVFWKGP---NARVQIASVLQMNE 1517
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLA-------------CQPGPRFNPESDESNASVV 79
+LVGLD EWK R S+LQ+A C+ E + S
Sbjct: 760 TLVGLDVEWKAV-FKAGEVSRASILQVAFRRNILIFDLLWMCREKEATKEEDELSRGDGG 818
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L +L V+P+I+KLGF K DL L +++ C F V L
Sbjct: 819 LYGG----------GILHDLLVNPNIIKLGFDLKNDLEKLRNSYPLSSC---FLFVSSLL 865
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
D++ K LGR SL + L L K +Q SDW RPL+EEQ YAA
Sbjct: 866 DVSK----WSLKLLGRS----GNSLKKTVQACLGKDLDKRMQISDWEARPLSEEQVQYAA 917
Query: 200 IDAHCLIEIFN 210
+DAHCL+ +F+
Sbjct: 918 LDAHCLLSVFD 928
>gi|348513863|ref|XP_003444460.1| PREDICTED: probable exonuclease mut-7 homolog [Oreochromis
niloticus]
Length = 864
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 5 YRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLAC 61
Y+ PL K+H V + E+ E + L + +VG+D EW+P S +V+L+QLA
Sbjct: 340 YQVPLTKDKVHFVDTPEALERCQ-SIVLKEGVVVGVDMEWQPTFGCIST-QQVALIQLAV 397
Query: 62 QPGPRFNPESDESNASVVFLLDLSSIPL---PSIWELLKELFVSPDILKLGFKFKQDLIY 118
SD VFL+DL + P ++ LF +LKLG+ DL
Sbjct: 398 ---------SDR-----VFLVDLCARRFCEHPETIRFIRSLFSQQSVLKLGYGMAGDLKC 443
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKL--PKET--------KSLANIC 168
L +T+ D ++E LD+ SI+ + H L R PKE K L+ +
Sbjct: 444 LLATWPQLQEDPL--KMEGMLDLLSIHKKIQHSALSRTHNGPKEVLVGEDCAEKGLSLLV 501
Query: 169 KELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+++L L K Q S+W RPL Q YA DA+CL+E++++ A G
Sbjct: 502 QQVLGRPLDKTEQMSNWEKRPLRISQIRYAVADAYCLLEVYSVVSRNPASFG 553
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT--RDAKLLRHQY 415
+ +CD M++GL ++LRC+G+D + + R E RV+LT + + LR Q
Sbjct: 627 RVVCDNMLQGLGRYLRCLGVDVVMLENTD-DHRVAAKLAQAEGRVILTCGQPFQTLRSQV 685
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG-RFIQKPLSTEEAVEAA 474
+ S Q + V++ F ++ + + SRC CN +++ P +
Sbjct: 686 AEGRCLSLDCSEKARDQAVRVLKHFNVQPTPSDIFSRCQACNSDQYVAVPRDDMVGMLKK 745
Query: 475 KGFQRIPD 482
KG +PD
Sbjct: 746 KGL--LPD 751
>gi|170051623|ref|XP_001861848.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872804|gb|EDS36187.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 925
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
++HLV S E +F + LSQ SLV D+EWKP + V+++QLA +
Sbjct: 432 RVHLVDSRE--KFFAMTSDLSQQSLVAFDSEWKPTFGGAN---EVAVIQLATRDD----- 481
Query: 70 ESDESNASVVFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V+L+D L S S W L +F D+LKL F D +
Sbjct: 482 ---------VYLVDVLVSQLQGSDWSELASVFNRDDVLKLAFAPSTDFNMFQKALPAFNV 532
Query: 129 DIGFDRVEPYLDITSIY---NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
G LD+ ++ + + Q K ++L+N+ K L L K Q S+W
Sbjct: 533 SYGPQSGSTILDLQVLWRKVDAIKSFQFPFKEEITNQNLSNLSKLCLGKKLDKSNQFSNW 592
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIF--QVKVAQ 218
+ RPL EQ YAA+DA+ L++I+++ Q+K A+
Sbjct: 593 AQRPLRREQIQYAALDAYVLLQIYDVIAKQLKAAR 627
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAAT-PRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH-QY 415
+F+CD M+EGLAK LR GIDA T P ++ + I EKR +LTR +
Sbjct: 711 RFVCDKMLEGLAKMLRRFGIDAVTIPAGEQADRCVFI--AHNEKRYVLTRGNNYQKFADN 768
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN-GRFIQKPLSTEEAVEAA 474
L Y+V + + QLLEV+ +++ I ++ + SRC CN GRF+Q +T + V
Sbjct: 769 LPSGHCYKVSNDQVDDQLLEVLAYYKIVIRQENIFSRCQLCNCGRFLQ---ATPDQVYYM 825
Query: 475 KGFQRIPDCL 484
K ++P L
Sbjct: 826 KHRTQMPATL 835
>gi|294631113|ref|ZP_06709673.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292834446|gb|EFF92795.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 243
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA + +P L +++ EKRVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYESTDIGDP-ALAARSAAEKRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S + QL ++++ F+ E + +RCT CNG +++ E A +
Sbjct: 145 RELWAGAF--VYSTRPDDQLGDILDRFR---PELRPWTRCTACNG-LLRQATKDEVADQL 198
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
G QR D F QC DC + YW+G +H+ ++ ++
Sbjct: 199 EHGTQRTYDV-------FAQCRDCGRAYWKGA-HHDQLEAIVE 233
>gi|395214877|ref|ZP_10400752.1| hypothetical protein O71_09144 [Pontibacter sp. BAB1700]
gi|394456091|gb|EJF10453.1| hypothetical protein O71_09144 [Pontibacter sp. BAB1700]
Length = 244
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 351 LGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL 410
L G +F+ DV + LA+ LR +G D T + EL+ +E+R+LLTRD L
Sbjct: 85 LAGIAERRFVLDVHLGTLARSLRMLGFD--TVYEQHLHDAELVRLAYEEQRILLTRDVNL 142
Query: 411 LRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL--MSRCTKCNGRFIQKPLSTE 468
L+H+ + Y ++S +QL EVI ++L DQL +RC CNG +Q
Sbjct: 143 LKHKAIPAG--YWLRSQQTEEQLQEVISRYKLA---DQLRPFTRCMVCNGHIVQ------ 191
Query: 469 EAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
VE + +++P +F+QC C ++YW+G+ Y
Sbjct: 192 --VEKQEVLEQVPPKTRLYFEEFYQCQQCRRVYWKGSHY 228
>gi|441504168|ref|ZP_20986165.1| hypothetical protein C942_00892 [Photobacterium sp. AK15]
gi|441428341|gb|ELR65806.1| hypothetical protein C942_00892 [Photobacterium sp. AK15]
Length = 277
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 26/166 (15%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLR----- 412
KF+ DV + LA+ LR +G DA + E++D + KEKR++LTRD + +
Sbjct: 111 KFIVDVNLGRLAQKLRLLGFDALYRNDFLDD--EIVDISLKEKRIILTRDRGIFKFNNVT 168
Query: 413 HQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
H Y ++N R +QL EVI QL+ S +RC+ CN + +P+ EE +E
Sbjct: 169 HGYWVRNHNTR-------KQLTEVINRLQLENSF-HPFTRCSHCNQQL--QPIDKEELIE 218
Query: 473 AAKGFQRIP-DCL--FDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
Q +P D L FDK FW C C+++YW+G+ Y ++K+I
Sbjct: 219 RYP--QHVPRDTLKYFDK---FWVCSGCDKIYWQGSHYQR-IEKWI 258
>gi|350396853|ref|XP_003484688.1| PREDICTED: probable exonuclease mut-7 homolog [Bombus impatiens]
Length = 942
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 44/208 (21%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L S+VG+D EWKP + ++L+Q+A + V++LD+
Sbjct: 414 LDNGLRDVSIVGIDLEWKP--CFGTKQTELALIQIATKAN--------------VYILDV 457
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF--------CSQGCDIGFD 133
++I L +W +L K LF + +ILKLGF QD+ + ++ C QG
Sbjct: 458 TTIGNKLIELWIKLSKALFENRNILKLGFGIAQDITVIRNSLPAFSKIKICGQG------ 511
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKET------KSLANICKELLDISLSKELQCSDWSN 187
YLDI ++ L + P E+ K+L+ + + L L+K Q S+W
Sbjct: 512 ----YLDIVHLWKKLV-EDYKFVFPHESDEQFTKKNLSKLVELCLGQKLNKSDQFSNWEQ 566
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
RPL E Q YAA+DA+CL+EI+ +++
Sbjct: 567 RPLRESQIIYAALDAYCLLEIYATLEIQ 594
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH-QYL 416
+ +CD M+ GL LR G D + R + EKRVLLTR+ + LR QY+
Sbjct: 702 RVVCDSMLGGLTSKLRMCGCDCVHLAFDQRGERS-VQVALYEKRVLLTRNKEYLRFSQYI 760
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
Y V + + QL EV++ F++ ++ + SRC CN ++E V+A+K
Sbjct: 761 PPEDCYFVMAANPDAQLREVLKYFKIIVTHRDIFSRCQDCN---------SDEFVKASK 810
>gi|242000324|ref|XP_002434805.1| conserved hypothetical protein [Ixodes scapularis]
gi|215498135|gb|EEC07629.1| conserved hypothetical protein [Ixodes scapularis]
Length = 492
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 53 RVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFK 111
R+SL+QLA G V+ +L LS + S W +L E+ S DILKLG+
Sbjct: 293 RLSLVQLAVWDG-----------VYVLDILKLSEVLGESHWRQLYTEILSSDDILKLGYG 341
Query: 112 FKQDLIYLSSTF-CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLA 165
+DL LS C + ++D+ S L K P +E K L+
Sbjct: 342 IVEDLKLLSEVAKCPSA------KARNFIDLCSFSEKLRQKHPSLMKPVIPKDREHKGLS 395
Query: 166 NICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF-NIFQVKVAQKGNSCS 224
+ + LL + L+K+ QCSDW NRPL Q YAA+DA CL++++ +F+ + N
Sbjct: 396 ELTRTLLGLPLNKDEQCSDWENRPLRSSQMRYAALDAFCLLQVYEELFKRAEGEDMNLRE 455
Query: 225 SISELDSS 232
I E+ S
Sbjct: 456 LIQEVRDS 463
>gi|356576837|ref|XP_003556536.1| PREDICTED: uncharacterized protein LOC100797818 [Glycine max]
Length = 571
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 32/188 (17%)
Query: 26 ARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLS 85
R + ++GLD EWKP S +VS++Q+A + +VF+ DL
Sbjct: 370 TRHIKGFKVIGLDCEWKPNYVKGSKPNKVSIMQIASE--------------KMVFIFDLI 415
Query: 86 SI--PLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT 142
+ +P I + L + +SP ILKLG+ F+ D L+ ++ C F E LDI
Sbjct: 416 KLHKEVPDILDDCLSCILLSPRILKLGYNFQCDAKQLAYSYEELRC---FKNYEMLLDIQ 472
Query: 143 SIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+++ K P+ LA + +++L SL+K + S+W RPLT Q YAA+DA
Sbjct: 473 NVF----------KEPR--GGLAGLAEKILGASLNKTRRNSNWEQRPLTPNQLEYAALDA 520
Query: 203 HCLIEIFN 210
L+ IF+
Sbjct: 521 VVLVHIFH 528
>gi|345302743|ref|YP_004824645.1| hypothetical protein Rhom172_0876 [Rhodothermus marinus
SG0.5JP17-172]
gi|345111976|gb|AEN72808.1| protein of unknown function DUF82 [Rhodothermus marinus
SG0.5JP17-172]
Length = 254
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 12/160 (7%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL D + LA++LR +G DA P L + + RVLLTRD +LL + +
Sbjct: 95 PRFLLDTHLGRLARYLRMLGFDAEHLSDPDPGDAALARRAGDDGRVLLTRDRRLLARKDV 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
Y V++ +QL EV+ F+L D SRC CN PL E VEA
Sbjct: 155 RYG--YFVRATSPREQLAEVLNRFELHEFVDPF-SRCMCCN-----VPL---EPVEAETV 203
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
++P + +F++C C ++YWEG+ +H +Q+ ID
Sbjct: 204 AAQLPPGIRAHYSEFYRCPACGRVYWEGS-HHARMQRLID 242
>gi|434407318|ref|YP_007150203.1| hypothetical protein Cylst_5512 [Cylindrospermum stagnale PCC 7417]
gi|428261573|gb|AFZ27523.1| hypothetical protein Cylst_5512 [Cylindrospermum stagnale PCC 7417]
Length = 252
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 18/161 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D+ + LA LR +G D T E EL +S+E+R+LLTRD LL ++
Sbjct: 101 RFVLDIHLGKLATSLRLLGFD--TLYRNDYEDEELAQISSREERILLTRDKGLLMRSLVV 158
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQL--KISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
Y V++ +Q++EV+ F L K+S Q RC +CNG EAV
Sbjct: 159 HG--YYVRNTQPQEQIVEVLRRFDLFKKLSPFQ---RCLRCNGLL--------EAVAKES 205
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
++P+ + + +F +C DC Q+YW+G+ Y +Q+FI+
Sbjct: 206 VIDQLPETVQLQTHEFHRCQDCAQIYWKGSHYER-LQQFIE 245
>gi|297848138|ref|XP_002891950.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337792|gb|EFH68209.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 569
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 32/179 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
+VG+D EWKP S +VS++Q+ SD + +F+LDL + +
Sbjct: 381 VVGIDCEWKPNYIKGSKQNKVSIMQIG----------SD----TKIFILDLIKLYNDATE 426
Query: 94 EL---LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
L L ++ S LKLG+ F+ D+ L+ ++ C F+R + LDI +++
Sbjct: 427 MLDNCLSQILQSKSTLKLGYNFQCDVKQLALSYGDLKC---FERYDMLLDIQNVFK---- 479
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+ LA + K++L +SL+K + SDW RPLT+ Q YAA+DA LI IF
Sbjct: 480 --------EPFGGLAGLTKKILGVSLNKTRRNSDWEQRPLTQNQLEYAALDAAVLIHIF 530
>gi|299472524|emb|CBN77309.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 648
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 39/183 (21%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL-------SSI 87
VGLD E P + R +LLQ+A ++ VFL DL +S+
Sbjct: 449 VGLDVENSPTTN------RATLLQVA--------------TSTDVFLFDLIALLGRAASL 488
Query: 88 PLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
+ ++ +++L P I+KLGF F D L TF S GF R+ L++ + +
Sbjct: 489 EVSRQFDATVEDLLTDPHIVKLGFSFAHDATALRKTFPSA---RGFRRIAALLEVGELSS 545
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ LGR P SL+ C+ L L K S W RPLT +Q YAA+DAHCL+
Sbjct: 546 AV----LGRSTP----SLSKTCEAWLGKPLDKTECASKWDVRPLTADQVRYAALDAHCLV 597
Query: 207 EIF 209
IF
Sbjct: 598 GIF 600
>gi|242087595|ref|XP_002439630.1| hypothetical protein SORBIDRAFT_09g017250 [Sorghum bicolor]
gi|241944915|gb|EES18060.1| hypothetical protein SORBIDRAFT_09g017250 [Sorghum bicolor]
Length = 562
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 34/202 (16%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI----PL 89
++G+D EW+P + +VS++Q+A SD+ V F+ DL + P
Sbjct: 376 IIGMDCEWRPNFEKNTKPSKVSIIQIA----------SDK----VAFIFDLIKLYEDDP- 420
Query: 90 PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH 149
++ L+ + S ILKLG+ + DL L+ ++ C F E LD+ ++ +
Sbjct: 421 KTLDSCLRRIMCSSKILKLGYDIQCDLHQLTQSYGELDC---FQSYEMLLDMQKLFKGV- 476
Query: 150 HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
T L+ + KE+L L+K + S+W RPLT+ QK YAA+DA L+ IF
Sbjct: 477 -----------TGGLSGLSKEILGAGLNKSRRNSNWEQRPLTQNQKEYAALDAVVLVHIF 525
Query: 210 NIFQVKVAQKGNSCSSISELDS 231
+ + AQ G S S E S
Sbjct: 526 HEHMRRQAQFGVSEGSKVEWKS 547
>gi|289596018|ref|YP_003482714.1| protein of unknown function DUF82 [Aciduliprofundum boonei T469]
gi|289533805|gb|ADD08152.1| protein of unknown function DUF82 [Aciduliprofundum boonei T469]
Length = 158
Score = 77.8 bits (190), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 16/149 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KFL D M+ LAK+LR +G D P + + LI +E+R+++TRD +L R
Sbjct: 2 KFLVDHMLGKLAKYLRFMGYDTYYPDGQLSD-NTLIKIAREEERIIITRDKELAR----- 55
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
++ + VKS +QL EVIE F L + D L+SRC+ CN + P+ E+ +
Sbjct: 56 RSNGFLVKSDNYEKQLREVIENFNL--NTDNLLSRCSVCNEPLV--PVKKEDVKD----- 106
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
++P +++ N +F+ C C ++YW GT
Sbjct: 107 -KVPVYVYEHNNEFYMCPKCRRIYWYGTH 134
>gi|82523929|emb|CAI78651.1| hypothetical protein [uncultured delta proteobacterium]
Length = 158
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
PKFL D + LAK LR +G D + K R ++ +E R++LTR ++ Q+
Sbjct: 5 PKFLTDATLAKLAKWLRILGYDTSV--YPKEAGRAMLRLAQEEDRIVLTRRGDMIERQF- 61
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+++ +K QL E+IE + LK +++L C KCN E +EA K
Sbjct: 62 -SGRLHLLKQTDVAAQLQEIIEKYSLKPEKEKLFGICLKCN--------KILEPIEAEKV 112
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLN 521
+P +F +F QC C +YWEGT N++ +F+ K+N
Sbjct: 113 RDLVPLYVFQHCKRFNQCTICQNIYWEGTHQRNSL-RFLQKNKIN 156
>gi|239616419|ref|YP_002939741.1| hypothetical protein Kole_0008 [Kosmotoga olearia TBF 19.5.1]
gi|239505250|gb|ACR78737.1| protein of unknown function DUF82 [Kosmotoga olearia TBF 19.5.1]
Length = 158
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF D M+ LAK LR +G D T E + +++ +E+R+LLTRD L H +
Sbjct: 2 KFFADRMLGKLAKKLRLLGFD--TLYFNNIEEKSILELLHEEERILLTRDRSL--HSRAL 57
Query: 418 KNQI--YRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
K I Y +KS N QL VI+ F+L L RC++CN E +AA
Sbjct: 58 KAGIDSYLLKSNHWNSQLRSVIQRFRLTEDNFHLFYRCSECNAEL--------EEADAAS 109
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKL 520
+PD + N +F +C C ++YW+GT ++ V L
Sbjct: 110 VSGLVPDFVLYTNDKFMRCPGCGRIYWKGTHLEKIIKSLQSVINL 154
>gi|169830616|ref|YP_001716598.1| hypothetical protein Daud_0418 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637460|gb|ACA58966.1| protein of unknown function DUF82 [Candidatus Desulforudis
audaxviator MP104C]
Length = 262
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 86/173 (49%), Gaps = 18/173 (10%)
Query: 334 RLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELI 393
R D+G GP + G P+F+ D + LA +LR G D T S + E EL
Sbjct: 79 RTIDVGPLSGP-----NAGFPFPPRFVLDTHLGRLAAYLRLAGFD--TLYSNRFEDVELA 131
Query: 394 DQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRC 453
+ ++EKRV+LTRD LL+ + + Y V++ QL EV+ F L + SRC
Sbjct: 132 EIAAREKRVVLTRDRGLLKRNRVTRG--YLVRASDPASQLAEVLARFDLGGAMVPF-SRC 188
Query: 454 TKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
CNG + P EE +E R+P + + F++C DC ++YW+GT
Sbjct: 189 LPCNGVLERMP--REEVLE------RVPPRVREDLDVFYRCPDCGRVYWDGTH 233
>gi|340716154|ref|XP_003396566.1| PREDICTED: probable exonuclease mut-7 homolog [Bombus terrestris]
Length = 943
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 36/204 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L S+VG+D EWKP + ++L+Q+A + V++LD+
Sbjct: 415 LDNGLKDVSIVGIDLEWKPCFGTKQT--GLALIQIATKAN--------------VYILDV 458
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRV----EP 137
++I L +W +L K LF + +ILKLGF QD+ + ++ F ++ +
Sbjct: 459 TTIGNKLTELWIKLSKALFENRNILKLGFGIAQDVTVIRNSLS------AFSKIKISGQG 512
Query: 138 YLDITSIYNHLHHKQLGRKLPKET------KSLANICKELLDISLSKELQCSDWSNRPLT 191
YLDI ++ L + P E+ K+L+ + + L L+K Q S+W RPL
Sbjct: 513 YLDIVHLWKKLV-EDYKFVFPHESDEQFTKKNLSKLVELCLGQKLNKSDQFSNWEQRPLR 571
Query: 192 EEQKNYAAIDAHCLIEIFNIFQVK 215
E Q YAA+DA+CL+EI+ +++
Sbjct: 572 ESQIIYAALDAYCLLEIYATLEIQ 595
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH-QYL 416
+ +CD M+ GL LR G D + R + EKRVLLTR+ + LR QY+
Sbjct: 703 RVVCDSMLGGLTSKLRMCGCDCVHLAFDQRGERS-VQVALYEKRVLLTRNKEYLRFSQYI 761
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG 458
Y V + + QL EV++ F++ ++ + SRC CN
Sbjct: 762 PSEDCYFVMAANPDAQLREVLKYFKIIVTRRDIFSRCQDCNS 803
>gi|224123698|ref|XP_002330186.1| predicted protein [Populus trichocarpa]
gi|222871642|gb|EEF08773.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 32/183 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI--PLPS 91
+VGLD EWKP S +VS++Q+A SD++ VF+ DL + +P
Sbjct: 377 VVGLDCEWKPNYVKGSKPNKVSIMQIA----------SDKT----VFIFDLIKLFEDIPD 422
Query: 92 IWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
I + L + SP ILKLG+ F+ D+ L+ ++ C F+ E LDI +++
Sbjct: 423 ILDNCLSRILQSPRILKLGYNFQCDIKQLAHSYGELRC---FNNYEKLLDIQNVFK---- 475
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
L+ + +++L L+K + S+W RPL Q YAA+DA L+ IF+
Sbjct: 476 --------DARGGLSGLAEKILGTGLNKTRRNSNWELRPLGHNQLEYAALDAAVLVHIFH 527
Query: 211 IFQ 213
F
Sbjct: 528 HFH 530
>gi|46579495|ref|YP_010303.1| 3' exoribonuclease [Desulfovibrio vulgaris str. Hildenborough]
gi|120602955|ref|YP_967355.1| 3'-5' exonuclease [Desulfovibrio vulgaris DP4]
gi|46448909|gb|AAS95562.1| 3'- 5' exonuclease domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563184|gb|ABM28928.1| 3'-5' exonuclease [Desulfovibrio vulgaris DP4]
Length = 202
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFN 68
++ LV + E E L S++G D E +P R + N P SL+QLAC
Sbjct: 29 EVRLVRTEE--ELADALDVLRSDSVLGFDTETRPTFRKGKVNLP--SLVQLAC------- 77
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
A VV+L+ L+ +PL E+L +L P I+K G + D+ L + +
Sbjct: 78 -------ADVVYLIQLNWVPLG---EMLADLLSDPAIIKTGVAVRDDIRDLQKLYAFRDG 127
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ + ++ R L ET L N+ L I +SK QCS+WSNR
Sbjct: 128 GV-----------------VDLGEVARDLGLETHGLRNLAANFLGIRISKGAQCSNWSNR 170
Query: 189 PLTEEQKNYAAIDAHCLIEI 208
L +Q YAA DA EI
Sbjct: 171 ELGPQQVVYAATDAWVSREI 190
>gi|387152866|ref|YP_005701802.1| 3'-5' exonuclease [Desulfovibrio vulgaris RCH1]
gi|311233310|gb|ADP86164.1| 3'-5' exonuclease [Desulfovibrio vulgaris RCH1]
Length = 201
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFN 68
++ LV + E E L S++G D E +P R + N P SL+QLAC
Sbjct: 28 EVRLVRTEE--ELADALDVLRSDSVLGFDTETRPTFRKGKVNLP--SLVQLAC------- 76
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
A VV+L+ L+ +PL E+L +L P I+K G + D+ L + +
Sbjct: 77 -------ADVVYLIQLNWVPLG---EMLADLLSDPAIIKTGVAVRDDIRDLQKLYAFRDG 126
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ + ++ R L ET L N+ L I +SK QCS+WSNR
Sbjct: 127 GV-----------------VDLGEVARDLGLETHGLRNLAANFLGIRISKGAQCSNWSNR 169
Query: 189 PLTEEQKNYAAIDAHCLIEI 208
L +Q YAA DA EI
Sbjct: 170 ELGPQQVVYAATDAWVSREI 189
>gi|334183377|ref|NP_176027.2| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
gi|332195255|gb|AEE33376.1| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
Length = 589
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 32/179 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
+VG+D EWKP S +VS++Q+ SD + +F+LDL + +
Sbjct: 380 VVGIDCEWKPNYIKGSKQNKVSIMQIG----------SD----TKIFILDLIKLYNDASE 425
Query: 94 EL---LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
L L + S LKLG+ F+ D+ L+ ++ C F+R + LDI +++N
Sbjct: 426 ILDNCLSHILQSKSTLKLGYNFQCDIKQLALSYGDLKC---FERYDMLLDIQNVFN---- 478
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+ LA + K++L +SL+K + SDW RPL++ Q YAA+DA LI IF
Sbjct: 479 --------EPFGGLAGLTKKILGVSLNKTRRNSDWEQRPLSQNQLEYAALDAAVLIHIF 529
>gi|268317539|ref|YP_003291258.1| hypothetical protein Rmar_1988 [Rhodothermus marinus DSM 4252]
gi|262335073|gb|ACY48870.1| protein of unknown function DUF82 [Rhodothermus marinus DSM 4252]
Length = 254
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 12/160 (7%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL D + LA++LR +G DA P L + + RVLLTRD +LL + +
Sbjct: 95 PRFLLDTHLGRLARYLRMLGFDAEHLPDPDPGDAALARRAGDDGRVLLTRDRRLLARKAV 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
Y V++ +QL EV++ F+L + SRC CN PL E V+A
Sbjct: 155 RYG--YFVRATSPREQLAEVLDRFELHEFVNPF-SRCMCCN-----VPL---EPVDAEAV 203
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
++P + +F++C C ++YWEG+ +H +Q+ ID
Sbjct: 204 AAQLPPGIRTHYTEFYRCPACGRVYWEGS-HHARMQRLID 242
>gi|345496472|ref|XP_001601894.2| PREDICTED: probable exonuclease mut-7 homolog [Nasonia vitripennis]
Length = 978
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 36/209 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L AL ++VG+D+EWKP S + P ++L+Q+A E+N V++LD+
Sbjct: 406 LDHALRNVNVVGIDSEWKPSFSIRK--PELALIQIAT-----------ETN---VYILDV 449
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTFCS----QGCDIGFDRVEP 137
+++ + +W EL LF + ILKLGF D+ + + + + C G
Sbjct: 450 TTLGNKVQHLWSELGITLFNNRSILKLGFGIAHDIAVIRESLPALSNIRACGDG------ 503
Query: 138 YLDITSIYNHLHHKQLGRKLPKE------TKSLANICKELLDISLSKELQCSDWSNRPLT 191
YLD++ ++ L K+ P + ++L+ + + L L+K Q S+W RPL
Sbjct: 504 YLDLSHLWKKLL-KEDNFVFPFKGDECFTNENLSKLVELCLGQRLNKSDQFSNWERRPLR 562
Query: 192 EEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
E Q YA++DA+CL+E++N+ V+ + G
Sbjct: 563 ESQILYASLDAYCLLEVYNVLAVQCDRLG 591
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAA---TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
P+F+CD M+ GLA+ LR G+D R R +D E+R+LLTR+ R
Sbjct: 748 PRFVCDAMLAGLARQLRKCGVDCVFFEHDRGGDHSFRTALD----ERRILLTRNGNFERF 803
Query: 414 -QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGR---FIQKPLSTEE 469
QYL Y + + QL EVI F++ +SE+ ++SRC CN F+ K +
Sbjct: 804 KQYLPPGCCYNIMEYKQEDQLSEVINYFKISVSENDILSRCQLCNSNEFVFVSKDTMLQL 863
Query: 470 AVEAAKGFQRIP 481
+ + F P
Sbjct: 864 MQRSGRNFHSQP 875
>gi|329766253|ref|ZP_08257811.1| hypothetical protein Nlim_1601 [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137312|gb|EGG41590.1| hypothetical protein Nlim_1601 [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 165
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 20/164 (12%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH-QY 415
P F D M+ +AK LR VG D+ E +LID E R+++++D +L++ Q
Sbjct: 9 PIFFVDAMLGSIAKKLRLVGYDSKYFSDIDDE--KLIDIARNENRIIISKDEELIKKIQR 66
Query: 416 LIKNQIYRVKSLLKN---QQLLEVIEAFQLK-ISEDQLMSRCTKCNGRFIQKPLSTEEAV 471
L + I + KN +Q LE++ LK I + +RCTKCN S +++
Sbjct: 67 LGLSSI----CITKNDEIEQFLEIVTRVNLKRIQINGNTARCTKCN--------SLTKSI 114
Query: 472 EAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
+ ++IP +F+ N +FW+C CN+ YWEGT N +QKF+
Sbjct: 115 DKNCIKEKIPQRVFNLNEKFWKCGCCNKFYWEGTHIKN-LQKFV 157
>gi|449435970|ref|XP_004135767.1| PREDICTED: uncharacterized protein LOC101205010 [Cucumis sativus]
Length = 580
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 33/184 (17%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI- 87
+ + +VG+D EWKP +VS++Q+A + + F+ DL +
Sbjct: 375 IEECKVVGIDCEWKPNYIKGKKPNKVSIMQIASE--------------KMAFIFDLIKLY 420
Query: 88 -PLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIY 145
+P I + L + S ILKLG+ F D+ LS ++ S C F E LDI +I+
Sbjct: 421 DDVPDILDNCLTRILQSSSILKLGYNFLCDVKQLSHSYESLKC---FKHYEMLLDIQNIF 477
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
+H + L+ + +++L L+K + SDW RPLT Q YAA+DA L
Sbjct: 478 DH-------------SGGLSGLAQKVLGAGLNKTRRNSDWEQRPLTVNQLEYAALDAVVL 524
Query: 206 IEIF 209
+ IF
Sbjct: 525 VHIF 528
>gi|356535024|ref|XP_003536049.1| PREDICTED: uncharacterized protein LOC100788595 [Glycine max]
Length = 566
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 26 ARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLS 85
R + ++GLD EWKP S +VS++Q+A + F+ DL
Sbjct: 370 TRHIEGFKVIGLDCEWKPNYIKGSKPNKVSIMQIASEDSA--------------FIFDLI 415
Query: 86 SI--PLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT 142
+ +P I + L + +SP ILKLG+ F+ D L+ ++ C F E LDI
Sbjct: 416 KLHKEVPDILDNCLSRILLSPRILKLGYNFQCDAKQLAYSYEELRC---FKNYEMLLDIQ 472
Query: 143 SIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+++ K P+ LA + +++L SL+K + S+W RPLT Q YAA+DA
Sbjct: 473 NVF----------KEPR--GGLAGLTEKILGASLNKTRRNSNWEQRPLTPHQLEYAALDA 520
Query: 203 HCLIEIF 209
L+ IF
Sbjct: 521 VVLVHIF 527
>gi|348677647|gb|EGZ17464.1| hypothetical protein PHYSODRAFT_351203 [Phytophthora sojae]
Length = 406
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+F++ A L + L+GLD E +P +LLQ+A + D S+ VF
Sbjct: 35 DFSYCAERLRSAQLMGLDTETRPTWGKTRGPNPCALLQIAVR---------DASHTEEVF 85
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
+LDL +P L +F+S I+KLG F QDL L+ ++ C F + ++
Sbjct: 86 ILDLRRLPATVYNSTLTSVFLSKKIIKLGQSFLQDLKELAQSYPQASC---FTVCKGVVE 142
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ N L G P SL + L L+K Q S+W RPLT Q +YAA
Sbjct: 143 V----NDLSIALAGAHNPL---SLQKLVFFYLHRKLAKTQQMSNWERRPLTASQLHYAAA 195
Query: 201 DAHCLIEIFN--IFQVKVAQKGNSCSSISELDSSNL 234
DA LI +++ + ++ Q+G S ++ + NL
Sbjct: 196 DALVLIHLYDELLMRISKKQQGFELSEVTNVLDINL 231
>gi|449520229|ref|XP_004167136.1| PREDICTED: uncharacterized LOC101205010 [Cucumis sativus]
Length = 580
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 33/184 (17%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI- 87
+ + +VG+D EWKP +VS++Q+A + + F+ DL +
Sbjct: 375 IEECKVVGIDCEWKPNYIKGKKPNKVSIMQIASE--------------KMAFIFDLIKLY 420
Query: 88 -PLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIY 145
+P I + L + S ILKLG+ F D+ LS ++ S C F E LDI +I+
Sbjct: 421 DDVPDILDNCLTRILQSSSILKLGYNFLCDVKQLSHSYESLKC---FKHYEMLLDIQNIF 477
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
+H + L+ + +++L L+K + SDW RPLT Q YAA+DA L
Sbjct: 478 DH-------------SGGLSGLAQKVLGAGLNKTRRNSDWEQRPLTVNQLEYAALDAVVL 524
Query: 206 IEIF 209
+ IF
Sbjct: 525 VHIF 528
>gi|405371850|ref|ZP_11027196.1| hypothetical protein A176_3642 [Chondromyces apiculatus DSM 436]
gi|397088687|gb|EJJ19657.1| hypothetical protein A176_3642 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 252
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + L LR +G D+ E L + E RVLL+RD +L+ +
Sbjct: 98 PRFVLDVGLGRLVGFLRMLGFDSLWRNDYADE--TLARVSHDEDRVLLSRDIGVLKRGEV 155
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ Y +S +QL+EV+ + L S + SRC CN PL++ E E A
Sbjct: 156 ARG--YFPRSTDPAEQLVEVVRRYGL-TSRMRPFSRCVACNA-----PLTSAEPSEVAG- 206
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
RIP+ + +++ +F QC DC ++YW GT +H +Q +D
Sbjct: 207 --RIPERVAERHSRFQQCPDCQRVYWAGT-HHERMQALVD 243
>gi|357441845|ref|XP_003591200.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
gi|355480248|gb|AES61451.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
Length = 519
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
+ + ++GLD EWKP S +VS++Q+A E A ++ L+ L
Sbjct: 335 IEDAKVIGLDCEWKPNYVKGSKPNKVSIMQIA-----------SEKKAFILDLIKLHREV 383
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+ L + +SP ILKLG+ F+ D+ L+ ++ C F + + LDI ++
Sbjct: 384 PERLDSCLTRILLSPGILKLGYNFQCDIKQLAHSYEELEC---FKKYKRLLDIQKVF--- 437
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
K P+ LA + +++L L+K + SDW RPLT Q YAA+DA L+ I
Sbjct: 438 -------KDPR--GGLAKLAEKILGAGLNKTRRNSDWEQRPLTPNQLEYAALDAVVLVHI 488
Query: 209 F 209
F
Sbjct: 489 F 489
>gi|312140077|ref|YP_004007413.1| hypothetical protein REQ_27120 [Rhodococcus equi 103S]
gi|311889416|emb|CBH48733.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length = 248
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ 414
G P+F+ DV + LA++LR +G D+ + + EL+ + + RVLLTRD LL
Sbjct: 95 GEPRFVLDVHLGRLARYLRLLGFDSVYSNDRSDD--ELLAVSRGQDRVLLTRDVGLLERA 152
Query: 415 YLIKNQ-IYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
L+ ++ S L QL EV++ F+L S ++RC +CNG L
Sbjct: 153 ALVYGGFLHETDSRL---QLREVLDRFRLH-SRIAPLTRCARCNG------LIAPSTPAM 202
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
A+G R+P + + +F +C DC Q+YW G
Sbjct: 203 ARG--RVPGGVLREQRRFSRCGDCGQVYWPGGH 233
>gi|455649957|gb|EMF28747.1| hypothetical protein H114_12951 [Streptomyces gancidicus BKS 13-15]
Length = 244
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 16/163 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA + +P L +++ EKRV+L+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYESTDIGDP-ALAARSAAEKRVMLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S +QL +V++ F E + +RCT CNG ++ + A +
Sbjct: 145 RELWAGAF--VYSTRPEEQLADVLDRFD---PELRPWTRCTACNG-LLRAAGKEDVADQL 198
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
+G R D F QC DC + YW+G +H+ ++ ++
Sbjct: 199 KEGTHRTYDV-------FAQCADCGRAYWKGA-HHDQLEAIVE 233
>gi|308802033|ref|XP_003078330.1| 3'-5' exonuclease, putative (ISS) [Ostreococcus tauri]
gi|116056782|emb|CAL53071.1| 3'-5' exonuclease, putative (ISS) [Ostreococcus tauri]
Length = 1013
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 34/184 (18%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+GLDAEW+P N P V+LLQ+A + VFL+DL + S E
Sbjct: 407 IGLDAEWRPG----DNTP-VALLQIATR--------------GEVFLVDLLATAPRSAGE 447
Query: 95 --------LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
LL+ + S D+ KLGF F D+ + +++ + +R + +D+ +
Sbjct: 448 ALNDATDELLQAVLWSEDVYKLGFSFAYDIKRMKASYSH--LKVWSERSKNLVDVKQLAF 505
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
++ + LA + +++ +L K+ QCSDW RPLTE Q YAA D H L
Sbjct: 506 ASSPSKMSLRC-----GLAVLTRQVTGFTLDKKEQCSDWGKRPLTEGQIAYAAADGHSLC 560
Query: 207 EIFN 210
IF+
Sbjct: 561 LIFD 564
>gi|357441841|ref|XP_003591198.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
gi|355480246|gb|AES61449.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
Length = 553
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
+ + ++GLD EWKP S +VS++Q+A E A ++ L+ L
Sbjct: 369 IEDAKVIGLDCEWKPNYVKGSKPNKVSIMQIA-----------SEKKAFILDLIKLHREV 417
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+ L + +SP ILKLG+ F+ D+ L+ ++ C F + + LDI ++
Sbjct: 418 PERLDSCLTRILLSPGILKLGYNFQCDIKQLAHSYEELEC---FKKYKRLLDIQKVF--- 471
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
K P+ LA + +++L L+K + SDW RPLT Q YAA+DA L+ I
Sbjct: 472 -------KDPR--GGLAKLAEKILGAGLNKTRRNSDWEQRPLTPNQLEYAALDAVVLVHI 522
Query: 209 F 209
F
Sbjct: 523 F 523
>gi|183980967|ref|YP_001849258.1| hypothetical protein MMAR_0946 [Mycobacterium marinum M]
gi|183174293|gb|ACC39403.1| conserved hypothetical protein [Mycobacterium marinum M]
Length = 257
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 13/152 (8%)
Query: 356 YPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQY 415
+P+F+ DV + LA+ +R +G+D S + L+D + E+R+LLTRD LL+ +
Sbjct: 97 HPRFVVDVNLGRLARMMRLLGLDVWW--SSVADDPALVDISLAEQRILLTRDRGLLKRRA 154
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ V S +QLLEVI L+ L SRC +CNGR + P++ EE ++ +
Sbjct: 155 VTHGLF--VHSQQPQEQLLEVIRRLDLRQRLAPL-SRCVRCNGRLV--PVAKEEVIDHLE 209
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R F +C DC ++YW G+ +
Sbjct: 210 PLTR------QHYDDFSRCSDCGRIYWAGSHH 235
>gi|386384147|ref|ZP_10069557.1| hypothetical protein STSU_14268 [Streptomyces tsukubaensis
NRRL18488]
gi|385668426|gb|EIF91759.1| hypothetical protein STSU_14268 [Streptomyces tsukubaensis
NRRL18488]
Length = 245
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 18/164 (10%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P L +++E+RVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALAALSARERRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLST-EEAVE 472
+ + V S +Q+ +V+ F +++ +RCT CNGR ++ T E +E
Sbjct: 145 REIWAGAY--VYSDRPEEQVRDVLGRFAPELAP---WTRCTACNGRLVEADKETVREQLE 199
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
+G +R D F QC DC+++YW G +H + + +D
Sbjct: 200 --QGTRRTYDV-------FAQCADCSRVYWRGA-HHARLVRIVD 233
>gi|386842158|ref|YP_006247216.1| hypothetical protein SHJG_6076 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374102459|gb|AEY91343.1| hypothetical protein SHJG_6076 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451795452|gb|AGF65501.1| hypothetical protein SHJGH_5838 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 236
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+D A + +P L +++ EKRV+L+RD LLR
Sbjct: 83 GAPLRFLLDVHLGTLARRLRLLGVDTAYESTDIGDP-ALAARSAAEKRVMLSRDRGLLRR 141
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S + QL +V++ F ++S +RCT CNG +++ E A +
Sbjct: 142 RELWAGAF--VYSTRPDDQLHDVLDRFAPELSP---WTRCTACNG-LLRQATKDEVAAQL 195
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
G QR D F QC C + YW+G +H+ ++ +
Sbjct: 196 KHGTQRSYDV-------FAQCTACGRAYWKGA-HHDQLEAIV 229
>gi|222100774|ref|YP_002535342.1| hypothetical protein CTN_1800 [Thermotoga neapolitana DSM 4359]
gi|221573164|gb|ACM23976.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
Length = 245
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 344 PPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVL 403
P W ++ +G P+F+ D+ + LA+ LR +G A + E +L KE +L
Sbjct: 84 PSEWLVTPRYEGEPRFVLDIHLGKLARFLRMLGFYAFF---GEEEDEKLCRMAVKENAIL 140
Query: 404 LTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQK 463
L+RD LL+ + L+ Y V++ +QL+EV+E + LK + +RC +CN F +
Sbjct: 141 LSRDVGLLKRKELVFG--YYVRNTAPKKQLVEVVERYDLK-RWMKPFTRCIECNTEFEEV 197
Query: 464 PLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
P +E+V+ R+P ++ +F +C C ++YW+G+ Y + V+
Sbjct: 198 P---KESVK-----DRVPPKVYRIFNEFVRCPSCGRVYWKGSHYDHMVE 238
>gi|325674446|ref|ZP_08154134.1| protein of hypothetical function DUF82 [Rhodococcus equi ATCC
33707]
gi|325554706|gb|EGD24380.1| protein of hypothetical function DUF82 [Rhodococcus equi ATCC
33707]
Length = 248
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ 414
G P+F+ DV + LA++LR +G D+ + + EL+ + + RVLLTRD LL
Sbjct: 95 GEPRFVLDVHLGRLARYLRLLGFDSVYSNDRSDD--ELLAVSRGQDRVLLTRDVGLLERA 152
Query: 415 YLIKNQ-IYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
L+ ++ S L QL EV++ F+L S ++RC +CNG L
Sbjct: 153 ALVYGGFLHETDSRL---QLREVLDRFRLH-SRIAPLTRCARCNG------LIAPSTPAM 202
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
A+G R+P + + +F +C DC Q+YW G
Sbjct: 203 ARG--RVPGGVLREQRRFSRCGDCGQVYWPGGH 233
>gi|441623909|ref|XP_003279887.2| PREDICTED: probable exonuclease mut-7 homolog [Nomascus leucogenys]
Length = 788
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 43/230 (18%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T A AL Q +VG+D EW P PR SLL
Sbjct: 329 DQYYQLPIPRENVHLLASWE--DLTRHAGALLQRHQVVGVDLEWTPVFV-AGGRPRPSLL 385
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE-------LLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 386 QVAVE--------------GHVFLLDILALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 431
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL--------GRKLPKETK 162
DL L ++ + VE + + SI L H+Q+ G + +
Sbjct: 432 GMVGDLQKLGTSCPT------LAHVEKQI-LGSIDLLLVHRQMRVANMPAPGMDRARGLR 484
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
L+ + +++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 485 GLSLLVQQVLGTALDKTQQLSNWDRRPLCEEQLIYAAADAYCLLEVHQAL 534
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G+DA + R + +E R++LT LR Q
Sbjct: 595 RVVCDNMLQGLARSLRCLGVDARM-LGDGEDHRRAAEVARQEGRIILTSGQPFHKLRAQV 653
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ SL QQ V++ F ++++ + SRC CN
Sbjct: 654 GAGCCLSVDCSLKAQQQAKAVLKHFNVRVTHADIFSRCQACN 695
>gi|388502398|gb|AFK39265.1| unknown [Medicago truncatula]
Length = 553
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
+ + ++GLD EWKP S +VS++Q+A E A ++ L+ L
Sbjct: 369 IEDAKVIGLDCEWKPNYVKGSKPNKVSIMQIA-----------SEKKAFILDLIKLHREV 417
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+ L + +SP ILKLG+ F+ D+ L+ ++ C F + + LDI ++
Sbjct: 418 PERLDSCLTRILLSPGILKLGYNFQCDIKQLAHSYEELEC---FKKYKRLLDIQKVF--- 471
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
K P+ LA + +++L L+K + SDW RPLT Q YAA+DA L+ I
Sbjct: 472 -------KDPR--GGLAKLAEKILGAGLNKTRRNSDWEQRPLTPNQLEYAALDAVVLVHI 522
Query: 209 F 209
F
Sbjct: 523 F 523
>gi|348677929|gb|EGZ17746.1| hypothetical protein PHYSODRAFT_560259 [Phytophthora sojae]
Length = 1489
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 84/190 (44%), Gaps = 35/190 (18%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+GLDAEW+P S + + S+LQ+AC VF+ D + L + E
Sbjct: 900 LGLDAEWRPD-SRAAVPSKCSILQVACD--------------DYVFIFDFVEMALGDLEE 944
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
L + LF S I K+GF D+ L +F C FD LD + + L
Sbjct: 945 LFEHLFASERIAKIGFAIDGDIKRLRWSFPDVKC---FDTFVNVLDFS--FETL------ 993
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
E + K+ L LSK Q SDW RPLT +Q YAA+DA+CL+ + Q
Sbjct: 994 -----EATTHLTYIKQALGYPLSKLQQKSDWERRPLTPQQVAYAALDAYCLL----MLQD 1044
Query: 215 KVAQKGNSCS 224
VA K S
Sbjct: 1045 AVANKHPGTS 1054
>gi|418471570|ref|ZP_13041375.1| hypothetical protein SMCF_4348 [Streptomyces coelicoflavus ZG0656]
gi|371547811|gb|EHN76166.1| hypothetical protein SMCF_4348 [Streptomyces coelicoflavus ZG0656]
Length = 242
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 41/208 (19%)
Query: 324 SSVIVDSREKRLDDIGDWQGPPPWDLSLGGD--------------GYP-KFLCDVMVEGL 368
+++VD RE PP + GG+ G P +FL DV + L
Sbjct: 52 GALLVDGREV-----------PPGHIPAGGESVRVRPVRHPQRVPGAPLRFLLDVHLGTL 100
Query: 369 AKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLL 428
A+ LR +G+D A + +P L ++ EKRV+L+RD LLR + L V S
Sbjct: 101 ARRLRLLGVDTAYESTDLGDP-ALAALSAAEKRVMLSRDRGLLRRRELWTGAY--VYSTR 157
Query: 429 KNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKN 488
++QL EV++ F+ ++ +RCT CNG ++ E A + G +R D
Sbjct: 158 PDEQLQEVLDRFRPELLP---WTRCTACNG-LLRAATKEEVAAQLEGGTRRSYDV----- 208
Query: 489 LQFWQCMDCNQLYWEGTQYHNAVQKFID 516
F QC DC + YW G +H ++ ++
Sbjct: 209 --FAQCADCGRAYWRGA-HHEQLEAIVE 233
>gi|424859751|ref|ZP_18283733.1| hypothetical protein OPAG_07504 [Rhodococcus opacus PD630]
gi|356661195|gb|EHI41527.1| hypothetical protein OPAG_07504 [Rhodococcus opacus PD630]
Length = 258
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P F+ DV + LA++LR +G D R+ +P EL+D + E R++LTRD LL+ L
Sbjct: 100 PTFVLDVHLGRLARYLRLLGFDTRY-RNDFADP-ELVDISLSEHRIVLTRDTGLLKRSAL 157
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ +QL EV++ F L+ S +RC +CNG + P+ EA+ A
Sbjct: 158 THGAF--LHETDPRRQLREVLDRFDLR-SRISPFTRCARCNG--LLAPVPRAEALAEA-- 210
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
P + +F +C DC QLYW G+
Sbjct: 211 ----PPGVAGNEHEFSRCRDCAQLYWPGSH 236
>gi|432350150|ref|ZP_19593554.1| hypothetical protein Rwratislav_44916 [Rhodococcus wratislaviensis
IFP 2016]
gi|430770489|gb|ELB86440.1| hypothetical protein Rwratislav_44916 [Rhodococcus wratislaviensis
IFP 2016]
Length = 260
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P F+ DV + LA++LR +G D R+ +P EL+D + E R++LTRD LL+ L
Sbjct: 102 PTFVLDVHLGRLARYLRLLGFDTRY-RNDFADP-ELVDISLSEHRIVLTRDTGLLKRSAL 159
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ +QL EV++ F L+ S +RC +CNG + P+ EA+ A
Sbjct: 160 THGAF--LHETDPRRQLREVLDRFDLR-SRISPFTRCARCNG--LLAPVPRAEALAEA-- 212
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
P + +F +C DC QLYW G+
Sbjct: 213 ----PPGVAGNEHEFSRCQDCAQLYWPGSH 238
>gi|194226096|ref|XP_001492084.2| PREDICTED: probable exonuclease mut-7 homolog [Equus caballus]
Length = 870
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D Y+ P+ +H + S E + L Q LVG+D EW+P P+VSL+Q
Sbjct: 371 DDYYQLPVARENVHFLASWE--DLARHEEELLQVGLVGVDLEWRPSFG-TGGRPQVSLMQ 427
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLPS--IWELLKELFVSPDILKLGFKFKQDL 116
+A + VFLLDL + S +L+ L P I KLG+ DL
Sbjct: 428 VAVE--------------GHVFLLDLLVLSQTSQAFSQLVLRLLSDPSITKLGYGMAGDL 473
Query: 117 IYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLP-------KETKSLANICK 169
L ++ C VE L + +H + +P K + L+ + +
Sbjct: 474 RSLGAS-CP-----ALAHVEKQLRGSLDLQQVHRQMRVVDMPAPSVDGTKGPRGLSLLVQ 527
Query: 170 ELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
++L L K Q S+W RPL+E Q YAA DA+CL+E++ +
Sbjct: 528 QVLGKPLDKRQQLSNWDRRPLSEAQLVYAATDAYCLLEVYRVL 570
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G+D + + + R + +E RV+LT LR Q
Sbjct: 631 RVVCDSMLQGLARSLRCLGVDVLVLGTGE-DHRRAAEVARQEGRVILTSGLPYHKLRAQV 689
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN-GRFIQKPLSTEEAVEAA 474
+ SL QQ V+ F ++++ + SRC CN ++++ + +
Sbjct: 690 RAGRCLSVDCSLKARQQAKAVLRHFNVRVTHADIFSRCQACNCDQYLKVSKDMMKQLMGL 749
Query: 475 KGFQRIPDCLFDKNLQ 490
G Q P D++ Q
Sbjct: 750 SGHQESPSNTGDEDAQ 765
>gi|384107152|ref|ZP_10008054.1| hypothetical protein W59_37713 [Rhodococcus imtechensis RKJ300]
gi|383833087|gb|EID72556.1| hypothetical protein W59_37713 [Rhodococcus imtechensis RKJ300]
Length = 260
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P F+ DV + LA++LR +G D R+ +P EL+D + E R++LTRD LL+ L
Sbjct: 102 PTFVLDVHLGRLARYLRLLGFDTRY-RNDFADP-ELVDISLSEHRIVLTRDTGLLKRSAL 159
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ +QL EV++ F L+ S +RC +CNG + P+ EA+ A
Sbjct: 160 THGAF--LHETDPRRQLREVLDRFDLR-SRISPFTRCARCNG--LLAPVPRAEALAEA-- 212
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
P + +F +C DC QLYW G+
Sbjct: 213 ----PPGVAGNEHEFSRCRDCAQLYWPGSH 238
>gi|303284617|ref|XP_003061599.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456929|gb|EEH54229.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1174
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAA-TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
KF+ D + LA+ LRC+G+DA P E L+ + RV+LTRD +L +
Sbjct: 949 KFVADGALGRLARWLRCLGVDAEHVPSGVANEHGALLALARVDDRVILTRDRRLAARRDA 1008
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ + V + +QL V + F L +L+SRC KCNG ++ TEE V+AA
Sbjct: 1009 SAS--FLVDADDPRRQLAIVSDHFGLTFERSRLLSRCAKCNGEVSRR--CTEEEVDAAVA 1064
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
+P + + +W+C C ++YW G + H A+ +FI
Sbjct: 1065 SGEVPRGVREATEDYWRCGRCEKIYWVGPKSHLAM-RFI 1102
>gi|167536930|ref|XP_001750135.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771297|gb|EDQ84965.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 21/163 (12%)
Query: 350 SLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT---R 406
++GG G +FL D M L + LRC G+D T + + ++ Q R ++T +
Sbjct: 912 AVGGVGQLRFLTDAMCGRLTRWLRCAGVD--TDMCLSYDVKAVVAQARAAGRTVITCSHK 969
Query: 407 DAKLLRH--QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKP 464
AK LR +L+ R Q +EV + F+L + D +SRCTKCNG F + P
Sbjct: 970 YAKQLRGVPHFLLHGADIR-------SQFIEVAQHFELALDPDSFLSRCTKCNGTFRKVP 1022
Query: 465 LSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ + +G +P + + +FW+C C + W+G+Q+
Sbjct: 1023 -----SADQLEGI--MPPRVLARVSEFWRCDSCGCIVWKGSQF 1058
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++GLD+EWKP+ ++ P V++LQLA + + +LD ++P S
Sbjct: 466 ILGLDSEWKPRTLSHADEP-VAILQLATR--------------DALVILDTLALPSSSYD 510
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
L +L+ ++K GF FK D+ L + S C F+ + +++ L H
Sbjct: 511 PWLLQLWTDETVVKTGFAFKGDMTKLRHSAPSARC---FEALHAFVE-------LEHAAK 560
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
SL ++ + L+K + SDWS RPLT+ Q +YAA+DA +++
Sbjct: 561 A-YCADWGASLGSLTATVFGRHLNKVDRMSDWSQRPLTKRQLHYAALDAWICVKLL 615
>gi|443489439|ref|YP_007367586.1| hypothetical protein MULP_01065 [Mycobacterium liflandii 128FXT]
gi|442581936|gb|AGC61079.1| hypothetical protein MULP_01065 [Mycobacterium liflandii 128FXT]
Length = 256
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 13/152 (8%)
Query: 356 YPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQY 415
+P+F+ DV + LA+ +R +G+D S + L+D + E+R+LLTRD LL+ +
Sbjct: 96 HPRFVVDVNLGRLARLMRLLGLDVWW--SSVADDPALVDISLAEQRILLTRDRGLLKRRA 153
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ V S +QLLEVI L+ L SRC +CNGR + P++ EE ++ +
Sbjct: 154 VTHGLF--VHSQQPQEQLLEVIRRLDLRQRLAPL-SRCVRCNGRLV--PVAKEEVIDRLE 208
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R F +C DC ++YW G+ +
Sbjct: 209 PLTR------QHYDDFSRCSDCGRIYWAGSHH 234
>gi|397733655|ref|ZP_10500369.1| hypothetical protein JVH1_4839 [Rhodococcus sp. JVH1]
gi|396930453|gb|EJI97648.1| hypothetical protein JVH1_4839 [Rhodococcus sp. JVH1]
Length = 260
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P F+ DV + LA++LR +G D R+ +P EL+D + E R++LTRD LL+ L
Sbjct: 102 PTFVLDVHLGRLARYLRLLGFDTRY-RNDFADP-ELVDISLSEHRIVLTRDTGLLKRSAL 159
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ +QL EV++ F L+ S +RC +CNG + P+ EA+ A
Sbjct: 160 THGAF--LHETDPRRQLREVLDRFDLR-SRISPFTRCARCNG--LLAPVPRAEALAEA-- 212
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
P + +F +C DC QLYW G+
Sbjct: 213 ----PPGVAGNEHEFSRCRDCAQLYWPGSH 238
>gi|332030729|gb|EGI70405.1| Putative exonuclease mut-7-like protein [Acromyrmex echinatior]
Length = 955
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 56/211 (26%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L ++VG+D EWKP S + P ++L+Q+A + V++LD+
Sbjct: 355 LDNGLRDVNIVGIDLEWKP--SFGTKQPELALMQVATEDN--------------VYILDV 398
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLS------STFCSQGCDIGFDRV 135
++I L +W EL LF + DI+K+GF QD+ + S+ + G
Sbjct: 399 TTIGDKLLELWNELGLVLFGNKDIIKIGFGIAQDMTVIRNSLPALSSIKTHG-------- 450
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKE--------------TKSLANICKELLDISLSKELQ 181
+ YLD+ ++ RKL +E +SL+ + + L K Q
Sbjct: 451 QGYLDLMLLW---------RKLVEEYNFVFPYKGDPNFTNRSLSKLVELCFGQRLDKSDQ 501
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
S+W RPL E Q YAA+DA+CL+EI+N+
Sbjct: 502 FSNWELRPLRESQIIYAALDAYCLLEIYNVL 532
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTS--------KEKRVLLTRDAK 409
+ +CD M+ GL+ LR GID L DQ +E R+LLTR+
Sbjct: 718 RVVCDSMLGGLSSKLRMCGIDCI---------HVLFDQGGDDSARLAMRENRILLTRNKN 768
Query: 410 LLRH-QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN-GRFIQKP 464
+ QYL YR+ + + QL EV+ F + ++++ + SRC CN F++ P
Sbjct: 769 CEKFKQYLPLENYYRIMADTADNQLREVLNYFGIVVTQNDIFSRCQICNFDEFVKVP 825
>gi|440894519|gb|ELR46950.1| Putative exonuclease mut-7-like protein, partial [Bos grunniens
mutus]
Length = 855
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +VG+D EW+P PRVSL+Q+A + VFLLDL +
Sbjct: 384 LQPGQVVGVDLEWRPSFG-TGGRPRVSLMQVAVE--------------GRVFLLDLPRLS 428
Query: 89 LPS-------IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
P+ +L+ +L P I KLG+ DL L +++ + +++ LD+
Sbjct: 429 SPAGGQGPRAFSQLVSQLLSDPSITKLGYGMAGDLRSLGTSYPA--LAQAGQKLQGGLDL 486
Query: 142 TSIYNHLHHKQLGRKLPK-----ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + + R P + L+ + +++L L K Q S+W RPL E Q
Sbjct: 487 LQVHRQM--RVADRPAPAVDGAAGPRGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLV 544
Query: 197 YAAIDAHCLIEIF 209
YAA DA+CL+E++
Sbjct: 545 YAAADAYCLLEVY 557
>gi|307176637|gb|EFN66105.1| Probable exonuclease mut-7-like protein [Camponotus floridanus]
Length = 1053
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 52/209 (24%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L ++VG+D EWKP S + P ++L+Q+A + V++LD+
Sbjct: 393 LDNGLKNVTIVGIDLEWKP--SFGTKQPELALIQIATEDN--------------VYILDV 436
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
+++ LP +W EL LF + +I+K+GF D+ + ++ + +
Sbjct: 437 TTLGNELPELWVELGLTLFGNKNIVKIGFGIAHDITVIRNSIPA---------------L 481
Query: 142 TSIYNH----LHHKQLGRKLPKE--------------TKSLANICKELLDISLSKELQCS 183
+SI NH L L RKL ++ +KSL+ + + L K Q S
Sbjct: 482 SSIKNHGQGYLDLMILWRKLTEDYNFIFPYKGDPNFTSKSLSKLVELCFGQRLDKSDQFS 541
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+W RPL E Q YAA+DA+CL+EI+ +
Sbjct: 542 NWELRPLRESQIIYAALDAYCLLEIYKVL 570
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 21/119 (17%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTS--------KEKRVLLTRDAK 409
+ +CD M+ GL+ LR G+D L DQ +E R+LLTR+
Sbjct: 815 RVVCDSMLGGLSSKLRMCGVDCV---------HVLFDQGGDDSAKLAMRENRILLTRNKN 865
Query: 410 LLRH-QYL--IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN-GRFIQKP 464
R QYL + YRV + + QL EV+ F + ++++ + SRC CN F++ P
Sbjct: 866 YERFKQYLPLFEENCYRVMADTPDNQLREVLRYFGVIVTQNDIFSRCQICNCDEFVKVP 924
>gi|419967605|ref|ZP_14483493.1| hypothetical protein WSS_A35717 [Rhodococcus opacus M213]
gi|414567113|gb|EKT77918.1| hypothetical protein WSS_A35717 [Rhodococcus opacus M213]
Length = 260
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P F+ DV + LA++LR +G D R+ +P EL+D + E R++LTRD LL+ L
Sbjct: 102 PTFVLDVHLGRLARYLRLLGFDTRY-RNDFADP-ELVDISLSEHRIVLTRDTGLLKRSAL 159
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ +QL EV++ F L+ S +RC +CNG + P+ EA+ A
Sbjct: 160 THGAF--LHETDPRRQLREVLDRFDLR-SRISPFTRCARCNG--LLAPVPRAEALAEA-- 212
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
P + F +C DC QLYW G+
Sbjct: 213 ----PPGVAGNEHAFSRCRDCAQLYWPGSH 238
>gi|126659229|ref|ZP_01730366.1| hypothetical protein CY0110_30458 [Cyanothece sp. CCY0110]
gi|126619428|gb|EAZ90160.1| hypothetical protein CY0110_30458 [Cyanothece sp. CCY0110]
Length = 235
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ DV + LAK +R +G D + E L D + ++ R LLTRD LL+ +I
Sbjct: 98 RFVLDVHLGKLAKQMRLLGFDVLYENNYSDE--SLADISHQQNRYLLTRDIALLKRSKVI 155
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y V+ QL+EV+ FQL SE RC +CNG + P+ EE E +
Sbjct: 156 YG--YWVRGKNTESQLIEVLNRFQL-FSEIIPFKRCMRCNG--LITPVHKEEIKEQLEPL 210
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ + +F+QC C Q+YW G+ Y
Sbjct: 211 TK------EHYDEFYQCTKCEQIYWRGSHY 234
>gi|329935308|ref|ZP_08285274.1| hypothetical protein SGM_6791 [Streptomyces griseoaurantiacus M045]
gi|329305131|gb|EGG48990.1| hypothetical protein SGM_6791 [Streptomyces griseoaurantiacus M045]
Length = 246
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+D A +P L +++ E+RVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDTAYESLDIGDP-ALAARSAAERRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S +QL EV++ F E +RCT CNG ++ E A
Sbjct: 145 RELWAGAF--VYSTRPEEQLEEVLDRFA---PEPHPWTRCTACNG-LLRAAAKEEVAARL 198
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
G +R D F QC +C + YW+G +H+ ++ ++
Sbjct: 199 ESGTRRTYDA-------FAQCRECGRAYWKGA-HHDRLEAIVE 233
>gi|359070742|ref|XP_002691738.2| PREDICTED: probable exonuclease mut-7 homolog [Bos taurus]
Length = 1026
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +VG+D EW+P PRVSL+Q+A + VFLLDL +
Sbjct: 446 LQPGQVVGVDLEWRPSFG-TGGRPRVSLMQVAVE--------------GRVFLLDLPRLS 490
Query: 89 LPS-------IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
P+ +L+ +L P I KLG+ DL L +++ + +++ LD+
Sbjct: 491 SPAGGQGPRAFSQLVSQLLSDPSITKLGYGMAGDLRSLGTSYPA--LAQAGQKLQGGLDL 548
Query: 142 TSIYNHLHHKQLGRKLPK-----ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + + R P + L+ + +++L L K Q S+W RPL E Q
Sbjct: 549 LQVHRQM--RVADRPAPAVDGAAGPRGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLV 606
Query: 197 YAAIDAHCLIEIF 209
YAA DA+CL+E++
Sbjct: 607 YAAADAYCLLEVY 619
>gi|255542852|ref|XP_002512489.1| 3-5 exonuclease, putative [Ricinus communis]
gi|223548450|gb|EEF49941.1| 3-5 exonuclease, putative [Ricinus communis]
Length = 570
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 34/181 (18%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL----SSIPL 89
+VGLD EWKP S +VS++Q+A SD+ +VF+ DL +P
Sbjct: 373 VVGLDCEWKPNFEKGSKPNKVSIMQIA----------SDK----MVFIFDLIKLFEDVP- 417
Query: 90 PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH 149
++ L + SP ILKLG+ F+ D L+ ++ C F E LDI ++
Sbjct: 418 DTLDNCLTRILQSPRILKLGYNFQCDTKQLAQSYGELKC---FKHYEMLLDIQNVCRE-- 472
Query: 150 HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
P+ L+ + K+LL L+K + S+W RPL++ Q YAA+DA LI IF
Sbjct: 473 --------PR--GGLSGLAKKLLGAGLNKTRRNSNWEQRPLSQHQLEYAALDAVVLIHIF 522
Query: 210 N 210
+
Sbjct: 523 H 523
>gi|172039179|ref|YP_001805680.1| hypothetical protein cce_4266 [Cyanothece sp. ATCC 51142]
gi|171700633|gb|ACB53614.1| hypothetical protein cce_4266 [Cyanothece sp. ATCC 51142]
Length = 268
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ DV + LAK +R +G D + E L D + +++R LLTRD LL+ +I
Sbjct: 100 RFILDVHLGKLAKQMRLLGFDVIYENNYSDET--LADISHQQQRYLLTRDIALLKRSKVI 157
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y V+ QL+EV+ F+L SE RC +CNG + P+ E E +
Sbjct: 158 YG--YWVRGKKTESQLIEVLNRFEL-YSEITPFKRCMRCNG--LITPVHKENIKEQLEPL 212
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
+ + +F+QC +C Q+YW+G+ Y ++KFI
Sbjct: 213 TQ------EHYHEFYQCTECEQVYWKGSHY-PKLEKFI 243
>gi|354552545|ref|ZP_08971853.1| protein of unknown function DUF82 [Cyanothece sp. ATCC 51472]
gi|353555867|gb|EHC25255.1| protein of unknown function DUF82 [Cyanothece sp. ATCC 51472]
Length = 266
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ DV + LAK +R +G D + E L D + +++R LLTRD LL+ +I
Sbjct: 98 RFILDVHLGKLAKQMRLLGFDVIYENNYSDET--LADISHQQQRYLLTRDIALLKRSKVI 155
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y V+ QL+EV+ F+L SE RC +CNG + P+ E E +
Sbjct: 156 YG--YWVRGKKTESQLIEVLNRFEL-YSEITPFKRCMRCNG--LITPVHKENIKEQLEPL 210
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
+ + +F+QC +C Q+YW+G+ Y ++KFI
Sbjct: 211 TQ------EHYHEFYQCTECEQVYWKGSHY-PKLEKFI 241
>gi|21223349|ref|NP_629128.1| hypothetical protein SCO4976 [Streptomyces coelicolor A3(2)]
gi|289769444|ref|ZP_06528822.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|20520977|emb|CAD30961.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289699643|gb|EFD67072.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 242
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 41/208 (19%)
Query: 324 SSVIVDSREKRLDDIGDWQGPPPWDLSLGGD--------------GYP-KFLCDVMVEGL 368
+++VD RE PP + GG+ G P +FL DV + L
Sbjct: 52 GALLVDGREV-----------PPGHIPAGGESVRVRPVRHPQRVPGAPLRFLLDVHLGTL 100
Query: 369 AKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLL 428
A+ LR +G+D A + +P L ++ EKRVLL+RD LLR + L V S
Sbjct: 101 ARRLRLLGVDTAYESTDLGDP-ALAALSAAEKRVLLSRDRGLLRRRELWAGAY--VYSTR 157
Query: 429 KNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKN 488
+QL EV++ F+ +S +RCT CNG + + + EE E +G R +D
Sbjct: 158 PEEQLQEVLDRFRPALSP---WTRCTACNG--LLRTATKEEVAEQLEGGTRRS---YDV- 208
Query: 489 LQFWQCMDCNQLYWEGTQYHNAVQKFID 516
F QC C + YW G +H ++ ++
Sbjct: 209 --FAQCTACGRAYWRGA-HHEQLEAIVE 233
>gi|157110292|ref|XP_001651037.1| hypothetical protein AaeL_AAEL005527 [Aedes aegypti]
gi|122068562|sp|Q179T2.1|MUT7_AEDAE RecName: Full=Probable exonuclease mut-7 homolog; AltName:
Full=Exonuclease 3'-5' domain-containing protein 3
homolog
gi|108878761|gb|EAT42986.1| AAEL005527-PA [Aedes aegypti]
Length = 719
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
+HLV S + +F + L + S++ D+EWKP + VSL+QLA
Sbjct: 437 VHLVDSKD--KFYAMLSDLCRQSMIAFDSEWKPTFGGAN---EVSLIQLATWDD------ 485
Query: 71 SDESNASVVFLLDLSSIPL-PSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V+++D+ L P W L K +F D+LKL F D+ S
Sbjct: 486 --------VYMIDVMVSQLEPLDWAALAKNVFNRDDVLKLSFAPSTDISMFQKALPSFNV 537
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKE---TKSLANICKELLDISLSKELQCSDW 185
LD+ ++ H+ R E ++LAN+ + L L K Q S+W
Sbjct: 538 MYSSQSTSAILDLQLLWRHVERFDSFRFPYHEESVNQNLANLVRLCLGKKLDKSNQFSNW 597
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
+ RPL +EQ YAA+DA CL+EI++ + ++
Sbjct: 598 AQRPLRKEQLRYAALDAFCLLEIYDAIEKQLTH 630
>gi|307154972|ref|YP_003890356.1| hypothetical protein Cyan7822_5199 [Cyanothece sp. PCC 7822]
gi|306985200|gb|ADN17081.1| protein of unknown function DUF82 [Cyanothece sp. PCC 7822]
Length = 256
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 18/160 (11%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F+ DV + LA LR +G D T E E+ ++ ++R++LTRD +L + ++
Sbjct: 103 FVLDVHLGKLASLLRLLGFD--TLYRNDYEDAEIAQISAAQQRIVLTRDKGVLMRKPVVY 160
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
Y V+ +Q+LEV+ + L + + MSRC +CNG I KP VE A +
Sbjct: 161 G--YYVRETDPQKQILEVLGRYNL-FALSRPMSRCIRCNG--IIKP------VEKAAIIE 209
Query: 479 RIP--DCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
++P C +N F+QC CNQ+YW+GT Y +QK ++
Sbjct: 210 QLPRQTCQIYEN--FYQCNHCNQIYWQGTHYQK-MQKMVE 246
>gi|154249964|ref|YP_001410789.1| hypothetical protein Fnod_1285 [Fervidobacterium nodosum Rt17-B1]
gi|154153900|gb|ABS61132.1| protein of unknown function DUF82 [Fervidobacterium nodosum
Rt17-B1]
Length = 244
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ 414
G P+F+ D+ + L+K LR GI A + +++D+ K ++LTRD KLL +
Sbjct: 91 GEPRFVLDIHLGKLSKLLRMFGIYAEYGLV---DDFQIVDRAKKIGGIILTRDRKLLMRR 147
Query: 415 YLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
++ Y ++S +QL EV E ++L ++ + SRC +CNG + + +E+V
Sbjct: 148 DIVYG--YIIRSDFPEEQLKEVFEMYEL-MNWVKPFSRCLECNGELV---VVDKESVSG- 200
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
R+P +F+ + +F C +C ++YW GT Y +
Sbjct: 201 ----RVPPRVFEMHDEFAMCGNCGKIYWRGTHYEH 231
>gi|358422031|ref|XP_001788105.2| PREDICTED: probable exonuclease mut-7 homolog [Bos taurus]
Length = 952
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +VG+D EW+P PRVSL+Q+A + VFLLDL +
Sbjct: 446 LQPGQVVGVDLEWRPSFG-TGGRPRVSLMQVAVE--------------GRVFLLDLPRLS 490
Query: 89 LPS-------IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
P+ +L+ +L P I KLG+ DL L +++ + +++ LD+
Sbjct: 491 SPAGGQGPRAFSQLVSQLLSDPSITKLGYGMAGDLRSLGTSYPA--LAQAGQKLQGGLDL 548
Query: 142 TSIYNHLHHKQLGRKLPK-----ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + + R P + L+ + +++L L K Q S+W RPL E Q
Sbjct: 549 LQVHRQM--RVADRPAPAVDGAAGPRGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLV 606
Query: 197 YAAIDAHCLIEIF 209
YAA DA+CL+E++
Sbjct: 607 YAAADAYCLLEVY 619
>gi|195051841|ref|XP_001993181.1| GH13217 [Drosophila grimshawi]
gi|193900240|gb|EDV99106.1| GH13217 [Drosophila grimshawi]
Length = 632
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ +P F H+ + L + ++ +DAEW Q+ ++ LLQ+A
Sbjct: 416 LIIVDTAPIFEHMLQHLQREQIIYMDAEWMQNVCVQN---QLCLLQIATTHN-------- 464
Query: 73 ESNASVVFLLD-LSSIPL-PSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L++ L W L +F + +ILK+GF DL L + Q
Sbjct: 465 ------VYLIDCLANQALHEDHWRALGATVFNNVNILKVGFSMLNDLSVLQRSLPLQ--- 515
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 516 LRLHMPHHYLDLRTVWLELKKQRHGIELPFGNLNRAGDALTDLTMLCLGKKLNKANQCSN 575
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFN 210
W+NRPL EQ YAAIDA CL+ I++
Sbjct: 576 WANRPLRREQILYAAIDARCLLHIYD 601
>gi|440704103|ref|ZP_20884985.1| hypothetical protein STRTUCAR8_07463 [Streptomyces turgidiscabies
Car8]
gi|440274267|gb|ELP62865.1| hypothetical protein STRTUCAR8_07463 [Streptomyces turgidiscabies
Car8]
Length = 248
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P L ++ E+RVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALAALSAAERRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S ++QL +V+ F ++ SRCT CNGR Q T
Sbjct: 145 RELWAGAY--VYSDRPDEQLRDVLGRFAPVLAP---WSRCTACNGRLSQADKQTVG---- 195
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
R+ D F QC DC +LYW G +H ++ ++
Sbjct: 196 ----DRLEDGTRRTYDVFAQCADCERLYWRGA-HHARLEAIVE 233
>gi|189219629|ref|YP_001940270.1| PIN-domain and Zn ribbon [Methylacidiphilum infernorum V4]
gi|189186487|gb|ACD83672.1| PIN-domain and Zn ribbon [Methylacidiphilum infernorum V4]
Length = 289
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 17/152 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ DV + LA++LR +G DA E +L + + E+RVLLTRD LL+ + +
Sbjct: 138 QFVLDVHLGTLARYLRMLGFDALYSNDWTDE--KLAEMSFLEQRVLLTRDPGLLKRKKVT 195
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM--SRCTKCNGRFIQKPLSTEEAVEAAK 475
+ Y V++ Q +EVI FQLK +++M RC CNG + +P+ E K
Sbjct: 196 RG--YFVRATEPRFQAVEVIREFQLK---EKIMPFGRCISCNG--LIQPIPKE------K 242
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
IP ++ F+QC +C ++YW G+ Y
Sbjct: 243 MNTEIPPQFKQRHSAFFQCQNCGKIYWMGSHY 274
>gi|397492286|ref|XP_003817058.1| PREDICTED: probable exonuclease mut-7 homolog [Pan paniscus]
Length = 878
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 104/230 (45%), Gaps = 43/230 (18%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ IHL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 361 DRYYQLPIPRESIHLLASWE--DLTRHEGALLQCHQVVGVDLEWTPVFV-AGGRPRPSLL 417
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE-------LLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 418 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 463
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL--------GRKLPKETK 162
+DL L T C VE + + I L H+Q+ G +E +
Sbjct: 464 GMVEDLQKLG-TSCP-----ALAHVEKQI-LGGIDLLLVHRQMRVASVPAPGVDRARELR 516
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
L+ + +++L +L K Q S+W RPL +EQ YAA DA+CL+E+
Sbjct: 517 GLSLLVQQVLGTALDKTQQLSNWDRRPLCQEQVIYAAADAYCLLEVHQAL 566
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G+DA + R + +E R++LT LR Q
Sbjct: 633 RVVCDNMLQGLARSLRCLGVDACM-LGNGEDHRRAAEVARQEGRIILTSGQPFHKLRAQV 691
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ SL QQ V++ F ++++ + SRC CN
Sbjct: 692 GAGRCLSVDCSLKAQQQAKAVLKHFNVRVTHADIFSRCQACN 733
>gi|428212552|ref|YP_007085696.1| hypothetical protein Oscil6304_2112 [Oscillatoria acuminata PCC
6304]
gi|428000933|gb|AFY81776.1| hypothetical protein Oscil6304_2112 [Oscillatoria acuminata PCC
6304]
Length = 268
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ D+ + LA LR +G D R+ P+ EL +S E R+LLTRD LL+
Sbjct: 114 PRFVLDIHLGKLAGFLRMLGFDTLY-RNDYPD-EELARVSSTENRILLTRDIGLLKRG-- 169
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
I Y V+S +++L EV+ F+L SRC CNG EAV
Sbjct: 170 IVTHGYWVRSTNPHKRLEEVLRRFEL-FDTITPFSRCIHCNGLL--------EAVTKTSI 220
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
+R+ + +F +C C+++YW+G+ Y +Q+FID
Sbjct: 221 LERLEPKTREHYDEFRRCSSCDKIYWKGSHY-EKMQEFID 259
>gi|226362860|ref|YP_002780640.1| hypothetical protein ROP_34480 [Rhodococcus opacus B4]
gi|226241347|dbj|BAH51695.1| hypothetical protein [Rhodococcus opacus B4]
Length = 258
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P F+ DV + LA++LR +G D T EL+D + E R+LLTRD LL+ +
Sbjct: 100 PTFVLDVHLGRLARYLRLLGFD--TRYRNDFADTELVDISLAEHRILLTRDTGLLKRSAV 157
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAV-EAAK 475
+ +QL EV++ F L+ S +RC +CNG + P+ ++A+ EA
Sbjct: 158 THGAF--LHETDPRRQLREVLDRFDLR-SRITPFTRCARCNG--LLAPIPRDDALAEAPP 212
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
G R QF +C DC QLYW G+
Sbjct: 213 GVAR-------NEHQFSRCRDCAQLYWPGSH 236
>gi|115463391|ref|NP_001055295.1| Os05g0357100 [Oryza sativa Japonica Group]
gi|55168078|gb|AAV43946.1| unknown protein [Oryza sativa Japonica Group]
gi|113578846|dbj|BAF17209.1| Os05g0357100 [Oryza sativa Japonica Group]
gi|215716995|dbj|BAG95358.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196622|gb|EEC79049.1| hypothetical protein OsI_19612 [Oryza sativa Indica Group]
gi|222631262|gb|EEE63394.1| hypothetical protein OsJ_18206 [Oryza sativa Japonica Group]
Length = 580
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 26/177 (14%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++G+D EWKP S +VS++Q+A + A + L+ L +
Sbjct: 395 IIGVDCEWKPNFEKGSKPNKVSIIQIA-----------SDKKAFIFDLIKLYEDDPKVLD 443
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
+ + S +ILKLG+ + DL LS ++ C F E LDI ++
Sbjct: 444 SCFRRIMCSSNILKLGYNLQCDLHQLSQSYGELKC---FQSYEMLLDIQKLFK------- 493
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
T L+ + K++L L+K + S+W RPLT+ QK YAA+DA L+ IF+
Sbjct: 494 -----GTTGGLSGLSKKILGAGLNKTRRNSNWEQRPLTQNQKEYAALDAVVLVHIFH 545
>gi|326671072|ref|XP_003199355.1| PREDICTED: probable exonuclease mut-7 homolog [Danio rerio]
Length = 847
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 36/224 (16%)
Query: 5 YRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLAC 61
Y+ PL +H V + E + A L S+VG+D EW+ S+ RV+L+QLA
Sbjct: 431 YQLPLPRENVHFVETLEEVDKCREA-VLKSGSVVGMDMEWRAGFGTVSS-QRVALIQLAV 488
Query: 62 QPGPRFNPESDESNASVVFLLDLSSIPLP---SIWELLKELFVSPDILKLGFKFKQDLIY 118
Q VFLLDL + + + + ++ L ILKLG+ DL
Sbjct: 489 Q--------------DQVFLLDLCAHAISHHSTTVDFIRALLSDKKILKLGYGMSGDLRS 534
Query: 119 LSSTFCSQGCDIGFD--RVEPYLDITSIYNHLHHKQLGRKLPKET--------KSLANIC 168
L ST+ D+ + ++E LD+ I+ L LG K + K L+ +
Sbjct: 535 LVSTWP----DLREEPMKMEGVLDLLLIHQELQRCWLGNKGCRSVEVSEGPAEKGLSLLV 590
Query: 169 KELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L L+K Q S+W RPL Q YAA DA+CL++I+ I
Sbjct: 591 QQVLGKPLNKSEQLSNWERRPLRTSQLRYAAADAYCLLDIYLIL 634
>gi|449283146|gb|EMC89845.1| putative exonuclease mut-7 like protein [Columba livia]
Length = 730
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 91/199 (45%), Gaps = 36/199 (18%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
+ L +VG+D EWKP PRVSLLQLA DE VFLLDL
Sbjct: 354 KVLRPGQVVGIDMEWKPSFGMVGK-PRVSLLQLALH---------DE-----VFLLDLPR 398
Query: 87 IPLPSIWELLKE--------LFVSPDILKLGFKFKQDLIYLSSTFCS--------QGCDI 130
+ ++ E KE L+ I KLG+ DL L++T+ + QG +
Sbjct: 399 LLEQAVMEAEKEKLPHFIQRLYSDAAITKLGYGMSGDLSSLAATWSALKDTDKQAQGV-V 457
Query: 131 GFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
++ +D+ S R + K L+ + + +L L K Q S+W RPL
Sbjct: 458 DLLTIDKQVDVVSP----EQSDEDRGCRQPEKGLSLLVQHVLGKPLDKTEQLSNWEKRPL 513
Query: 191 TEEQKNYAAIDAHCLIEIF 209
EEQ YAA DA+CL+EI+
Sbjct: 514 REEQILYAASDAYCLLEIY 532
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 360 LCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDA--KLLRHQYLI 417
+CD M++GL ++LRC+G+D ++ + R+ + +E RV+LT + LR Q +
Sbjct: 601 VCDNMLQGLGRYLRCLGVDVQMLENED-DHRKAAEIARQEGRVILTSGLPYQTLRSQ-VA 658
Query: 418 KNQIYRVKSLLK-NQQLLEVIEAFQLKISEDQLMSRCTKCNG 458
+ + + V S K +Q ++V++ F +++S + SRC G
Sbjct: 659 EGRCFSVNSSEKAKEQAVQVLKHFNVQVSLSDIFSRCQVGRG 700
>gi|348172611|ref|ZP_08879505.1| putative zinc finger protein [Saccharopolyspora spinosa NRRL 18395]
Length = 242
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 17/151 (11%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +GID A + ELI Q +E+RVLLT+D +LR + L
Sbjct: 87 PRFVLDVHLGKLARRLRLLGIDTAYRNDATDD--ELIQQAERERRVLLTQDRGILRRRVL 144
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAV-EAAK 475
+ Y V+ +Q+++V+ F + + +RCT CNG + P+S E+ E
Sbjct: 145 -RAGAY-VRGADPARQMVDVVGRFAPPL---EPWTRCTACNG--VLHPVSKEDVEDEIEP 197
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
G +R D + +C DC Q+YW G
Sbjct: 198 GTRRHYD-------DYARCEDCAQVYWRGAH 221
>gi|111020617|ref|YP_703589.1| hypothetical protein RHA1_ro03628 [Rhodococcus jostii RHA1]
gi|110820147|gb|ABG95431.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 260
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P F+ DV + LA++LR +G D R+ +P EL++ + E R++LTRD LL+ L
Sbjct: 102 PTFVLDVHLGRLARYLRLLGFDTRY-RNDFADP-ELVNISLSEHRIVLTRDTGLLKRSAL 159
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ +QL EV++ F L+ S +RC +CNG + P+ EA+ A
Sbjct: 160 THGAF--LHETDPRRQLREVLDRFDLR-SRISPFTRCARCNG--LLAPVPRAEALAEA-- 212
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
P + +F +C DC QLYW G+
Sbjct: 213 ----PPGVAGNEHEFSRCRDCAQLYWPGSH 238
>gi|408529628|emb|CCK27802.1| hypothetical protein BN159_3423 [Streptomyces davawensis JCM 4913]
Length = 240
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P FL DV + LA+ LR +G+D A +P L +++ EKRV+L+RD LLR
Sbjct: 86 GAPLSFLLDVHLGTLARRLRLLGVDTAYESMDIGDP-ALAARSAAEKRVMLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S QL +V+E F+ E + +RCT CNG +++ E A +
Sbjct: 145 RELFAGAY--VYSTRPEDQLRDVLERFR---PELRPWTRCTACNG-LLREATKEEVADQL 198
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAV 511
G QR D F QC +C + YW+G + V
Sbjct: 199 HGGTQRSYDV-------FAQCQECGRAYWKGAHHEQLV 229
>gi|429201769|ref|ZP_19193216.1| hypothetical protein STRIP9103_06325 [Streptomyces ipomoeae 91-03]
gi|428662739|gb|EKX62148.1| hypothetical protein STRIP9103_06325 [Streptomyces ipomoeae 91-03]
Length = 239
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 16/162 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA + +P L +++ E+RV+L+RD LLR
Sbjct: 82 GAPLRFLLDVHLGTLARRLRLLGVDAAYESTDIGDP-ALAARSAAERRVMLSRDRGLLRR 140
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S +QL +V++ F E + SRCT CNG + K + EE +
Sbjct: 141 RELWAGAF--VYSTRPEEQLRDVLDRFA---PELRPWSRCTACNG--MLKAATKEEVAD- 192
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
R+ D F QC +C + YW+G +H ++ +
Sbjct: 193 -----RLEDGTHRSYDVFAQCEECGRAYWKGA-HHEQLEAIV 228
>gi|449477771|ref|XP_002190738.2| PREDICTED: probable exonuclease mut-7 homolog [Taeniopygia guttata]
Length = 837
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 97/207 (46%), Gaps = 43/207 (20%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
+ L +VG+D EWKP PRV+LLQLA + DE VFLLDL
Sbjct: 381 KVLQPGQVVGVDMEWKPSFGMVGK-PRVALLQLALK---------DE-----VFLLDLPQ 425
Query: 87 IPLPSIWELLKE--------LFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+ + E KE L+ I KLG+ DL L++T CS D +++
Sbjct: 426 LLEQAETEGEKEKLPHFIQMLYSDATITKLGYGMSGDLSSLAAT-CSTLKDTE-KQMQGV 483
Query: 139 LDITSIYNHLH----------------HKQLGRKLPKETKSLANICKELLDISLSKELQC 182
+D+ ++ L H+Q G + P+ K L+ + + +L L K Q
Sbjct: 484 VDLLAVDKQLQWGKDSRKVDGLSPEHSHEQRGVRQPE--KGLSLLVQHVLGKPLDKTEQL 541
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIF 209
S+W RPL EEQ YAA DA+CL+EI+
Sbjct: 542 SNWEKRPLREEQILYAASDAYCLLEIY 568
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 360 LCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRD--AKLLRHQYLI 417
+CD M++GL ++LRC+G+D + + E R+ + +E RV+LT + LR Q +
Sbjct: 618 VCDNMLQGLGRYLRCLGVDVRL-LNNEDEHRKAAEIARQEGRVILTSGLPYQTLRSQ-VG 675
Query: 418 KNQIYRVK-SLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ + + V S +Q L+V++ F +++S + SRC CN
Sbjct: 676 EGRCFSVNCSEKAKEQALQVLKHFNVQVSLGDIFSRCQVCN 716
>gi|384249267|gb|EIE22749.1| hypothetical protein COCSUDRAFT_47679 [Coccomyxa subellipsoidea
C-169]
Length = 400
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 37 LDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELL 96
LDAEW+P S P SL+Q A + + S + L+D ++P + LL
Sbjct: 46 LDAEWEPYTSK----PCASLVQAAVR--------TRGSAEQYLLLMDFEAVPKLDLRRLL 93
Query: 97 KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRK 156
+++F +LK+G+ DL +++ +G V+P++DI S++ L+ K
Sbjct: 94 QKIFRDRAMLKVGYGLLMDLRAIATGLGGEGTGC-VSVVDPFIDIGSLHRALYSKGTPGI 152
Query: 157 LPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
E K LA + + L L K LQCS WS RPL +Q
Sbjct: 153 AKVEGKGLAGLVEVQLGQRLDKRLQCSSWSQRPLQPDQ 190
>gi|326508692|dbj|BAJ95868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 562
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 28/178 (15%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++G+D EWKP S +V+++Q+A + A + L+ L ++
Sbjct: 377 IIGVDCEWKPNYEKGSRPNKVAIIQIA-----------SDKKAFIFDLIKLYEDDPKALD 425
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
+ + S +ILKLG+ + DL L+ ++ C F E LDI
Sbjct: 426 CCFRRIMCSSNILKLGYNLQCDLHQLTQSYGELLC---FQSYEMLLDI------------ 470
Query: 154 GRKLPKETKS-LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+KL KET L+ + K++L L+K + SDW RPL++ QK YAA+DA L+ IF+
Sbjct: 471 -QKLFKETTGGLSGLSKKILGAGLNKTRRNSDWEQRPLSQNQKEYAALDAAVLVHIFH 527
>gi|374857252|dbj|BAL60105.1| hypothetical conserved protein [uncultured candidate division OP1
bacterium]
Length = 252
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F+ DV + LA+ LR +G D T S + EL+ ++E R++LTRD LL+H +
Sbjct: 98 FVADVHLGKLARLLRLLGFD--TLHSNTYDDSELVAIAAREGRIVLTRDRGLLKHNAVTH 155
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
Y ++S +Q EV+ F L+ D RC CNG + P++ E +
Sbjct: 156 G--YWLRSTNPVEQAREVVRRFNLETLIDPF-RRCLVCNG--LLAPVTKAEIL------A 204
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
IP + ++ +F++C +C +LYW GT Y
Sbjct: 205 HIPPRVAVEHDEFFRCTNCEKLYWRGTHY 233
>gi|291437583|ref|ZP_06576973.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291340478|gb|EFE67434.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 243
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 16/163 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+D A + +P L +++ EKRV+L+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDTAYEATDIGDP-ALAARSAAEKRVMLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S ++QL V++ F+ E + +RCT CNG ++K E A +
Sbjct: 145 RELWAGAF--VYSTRPDEQLQYVLDRFR---PELRPWTRCTACNG-LLRKASKEEVADQL 198
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
G R D F QC +C + YW+G +H ++ ++
Sbjct: 199 KGGTHRTYDV-------FAQCTECERAYWKGA-HHEQLEAIVE 233
>gi|443624618|ref|ZP_21109086.1| hypothetical protein STVIR_2991 [Streptomyces viridochromogenes
Tue57]
gi|443341884|gb|ELS56058.1| hypothetical protein STVIR_2991 [Streptomyces viridochromogenes
Tue57]
Length = 243
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+D A + +P L +++ E+RV+L+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDTAYESTDIGDP-ALAARSAAEQRVMLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S ++QL +V++ F+ E + +RCT CNG +++ E A +
Sbjct: 145 RELWAGAF--VYSTRPDEQLRDVLDRFR---PELRPWTRCTACNG-LLKEASKEEVADQL 198
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAV 511
G QR D F +C +C + YW+G + V
Sbjct: 199 EGGTQRTYDV-------FARCTECGRAYWKGAHHEQLV 229
>gi|194759149|ref|XP_001961812.1| GF15154 [Drosophila ananassae]
gi|190615509|gb|EDV31033.1| GF15154 [Drosophila ananassae]
Length = 627
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ + +F + L + + LD+EW +S ++ LLQ+A
Sbjct: 412 LIIIDTAVKFDEMLNDLQRQQTIYLDSEWLQNICGES---QLCLLQIATD---------- 458
Query: 73 ESNASVVFLLDL---SSIPLPSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V+L+D SI P W LL ++F + +ILK+GF DL L + Q
Sbjct: 459 ----QFVYLIDCLARESIQ-PEQWRLLGSKVFNNVNILKVGFSMACDLSVLQRSLPLQ-- 511
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCS 183
+ YLD+ S++ L + G +LP + +L+++ L L+K QCS
Sbjct: 512 -LRLHTPHHYLDLRSLWLQLKKQHTGVELPFGNINRAGGALSDLSFLCLGKKLNKSNQCS 570
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
+W+NRPL EQ YAAIDA CL IF Q ++
Sbjct: 571 NWTNRPLRHEQIIYAAIDARCLFLIFKTLQARI 603
>gi|407464083|ref|YP_006774965.1| hypothetical protein NSED_01055 [Candidatus Nitrosopumilus sp. AR2]
gi|407047271|gb|AFS82023.1| hypothetical protein NSED_01055 [Candidatus Nitrosopumilus sp. AR2]
Length = 160
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 22/168 (13%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLL---RHQY 415
FL D M+ +A+ L+ G D+ + + ELI + E+R+++++D +L+ + Q
Sbjct: 5 FLVDAMLGNIARKLQIFGYDSEYKSN--IDDLELIKKAKNEQRIIISKDRELIIKAKKQG 62
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLK---ISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
+I I + + +Q LE++E L+ +S D+ +RCTKCN S ++
Sbjct: 63 IISVHITKENEI---EQFLEILEQISLELDAVSGDR--ARCTKCN--------SLTSQID 109
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKL 520
+ +IP + + N +FW+C +C+Q+YWEGT + +Q+F++ KL
Sbjct: 110 KSNISDKIPQKVSEFNDKFWKCNNCDQIYWEGT-HIKKMQEFLEKIKL 156
>gi|302558747|ref|ZP_07311089.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302476365|gb|EFL39458.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 243
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+D A + +P L +++ E+RV+L+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDTAYESTDIGDP-ALAARSAAEQRVMLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S +QL V++ FQ E + SRCT CNG ++K + A +
Sbjct: 145 RELWAGAF--VYSTRPEEQLTYVLDRFQ---PELRPWSRCTACNG-LLRKASKEDVADQL 198
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAV 511
G R D F QC +C + YW+G + V
Sbjct: 199 KGGTHRTYDV-------FAQCAECGRAYWKGAHHDQLV 229
>gi|332159019|ref|YP_004424298.1| hypothetical protein PNA2_1380 [Pyrococcus sp. NA2]
gi|331034482|gb|AEC52294.1| hypothetical protein PNA2_1380 [Pyrococcus sp. NA2]
Length = 155
Score = 72.8 bits (177), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 17/158 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D+M+ LA+ LR G D + + E+++ KE RV+L+RD +L+R +
Sbjct: 2 KFIADMMLGRLARWLRLYGYDTVYGIN---DDDEILNIARKENRVILSRDLELVRRARKL 58
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM---SRCTKCNGRFIQKPLSTEEAVEAA 474
+ +KS N +V + L +S D+L +RC KCNGR I+ E
Sbjct: 59 GIEAIFIKS---NSLEEQVSQLMHLGVSFDELFPENARCPKCNGRIIRVD------KEHV 109
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
KG ++P+ +++ +F+ C +C Q+YW G Q+ ++
Sbjct: 110 KG--KVPEAVYNAYEEFYVCTNCGQIYWPGRQWREMLK 145
>gi|116619358|ref|YP_821514.1| hypothetical protein Acid_0216 [Candidatus Solibacter usitatus
Ellin6076]
gi|116222520|gb|ABJ81229.1| protein of unknown function DUF82 [Candidatus Solibacter usitatus
Ellin6076]
Length = 226
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 15/164 (9%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEP-RELIDQTSKEKRVLLTRDAKLLRHQY 415
P+F+ D + LA +LR +G D P P + L +S+E RVLLTRD LL+ +
Sbjct: 72 PRFVLDQHLGRLAAYLRMLGFDVL---HTVPAPDQHLAAASSREDRVLLTRDVGLLKRKE 128
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ + Y V++ QLLEV++ F L + +RC CN PL E+V+ A
Sbjct: 129 VRRG--YFVRATDPRAQLLEVLKRFGL-VDAIAPFTRCFLCN-----TPL---ESVDKAV 177
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCK 519
+++P+ + D + F +C C ++YW+G+ Y + D+ K
Sbjct: 178 IARQLPERIADLHNHFMRCPSCGRVYWKGSHYDRMRELIEDIKK 221
>gi|29829833|ref|NP_824467.1| hypothetical protein SAV_3291 [Streptomyces avermitilis MA-4680]
gi|29606942|dbj|BAC71002.1| hypothetical protein SAV_3291 [Streptomyces avermitilis MA-4680]
Length = 241
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 16/163 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+D A + +P L ++ EKRVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDTAYESTDLGDP-ALAALSAAEKRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L + S + QL +V++ F ++ +RCT CNG ++K + A +
Sbjct: 145 RELWAGAY--IYSTRPDDQLRDVLDRFAPGLAP---WTRCTACNG-VLEKATKEQVADQL 198
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
G QR D F QC +C + YW+G +H+ ++ ++
Sbjct: 199 EGGTQRSYDV-------FAQCEECGRAYWKGA-HHDRLEAIVE 233
>gi|384244778|gb|EIE18276.1| hypothetical protein COCSUDRAFT_68365 [Coccomyxa subellipsoidea
C-169]
Length = 840
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 25/209 (11%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKP---QRSHQSNFPRVSLLQLACQPG 64
P +H V S A L +++++GLD EW+P R P VSLLQ+A +
Sbjct: 601 PDAVHFVDSAAG--LAQAASLLEEAAVLGLDCEWEPCTESRRGSDRHPPVSLLQIASR-- 656
Query: 65 PRFNPESDESNASVVFLLDLSSI-PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
V +LD++++ + + LL L S D++K G +D+ L+ +F
Sbjct: 657 ------------RHVVVLDMAALHQVAQLDALLTMLLCSNDVIKAGVGVVEDIGQLARSF 704
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKL--PKETKSLANICKELLDISLSKELQ 181
+ F L++ S ++ QLG + K L+ + + L L K +Q
Sbjct: 705 PAIQ---AFTNCRGLLELGSAFSQSEAAQLGMQAVQKKHGPGLSAMAEACLGRPLDKSMQ 761
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
S W+ RPL+E Q YAA+DA + I++
Sbjct: 762 MSRWNRRPLSERQLTYAALDALASVLIYD 790
>gi|268573488|ref|XP_002641721.1| C. briggsae CBR-MUT-7 protein [Caenorhabditis briggsae]
Length = 896
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 15/217 (6%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
E L+R +S VG D+EWKP +N +++++QL + +V
Sbjct: 416 EIESLSREPEKSVYVGFDSEWKPSNLITANSSKIAIIQLFFK-----------DKVLLVD 464
Query: 81 LLDLSSIPLPSI-WE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
++L +P + WE K LF +P + +GF + DL + +G + ++++
Sbjct: 465 CVELEKEKVPDLLWERFAKGLFETPKLKLIGFDMRNDLEAIIELPALKG-RLNLEQIKNA 523
Query: 139 LDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
D+ + ++ + +LPK+T LA++ + LL L K QCS+W RPL ++Q Y
Sbjct: 524 YDLKRLAENICDIDMDILELPKKTFKLADLTQYLLGQVLDKTEQCSNWQCRPLRKKQILY 583
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNL 234
AA+DA ++ F K ++ S + +SN+
Sbjct: 584 AALDAVVVVNTFKKILEKTQERNEDVDVPSVVKNSNV 620
>gi|195114732|ref|XP_002001921.1| GI14516 [Drosophila mojavensis]
gi|193912496|gb|EDW11363.1| GI14516 [Drosophila mojavensis]
Length = 625
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 30/206 (14%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ P F + + L + ++ LD+EW Q+ ++ LLQ+A
Sbjct: 409 LIIVDSFPIFNRMLKHLQREHIIYLDSEWMQNVCAQN---QLCLLQIA------------ 453
Query: 73 ESNASVVFLLD-LSSIPL--PSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V+L+D L+S P W L +F +P+ILK+GF DL L + Q
Sbjct: 454 --TTCNVYLIDCLASRPALEEQHWRALGATVFNNPNILKVGFSMLNDLSVLQRSLPLQ-- 509
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCS 183
+ YLD+ +++ L +Q G +LP + +L ++ L L+K QCS
Sbjct: 510 -LRLHMPHHYLDLRNVWLELKKRQ-GVELPFGNVNRAGDALTDLSMLCLGKKLNKTNQCS 567
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIF 209
+W+NRPL EQ YAAIDA CL+ I+
Sbjct: 568 NWANRPLRREQILYAAIDARCLLLIY 593
>gi|119608788|gb|EAW88382.1| hypothetical protein FLJ20433, isoform CRA_b [Homo sapiens]
Length = 390
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 33/221 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 41 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 97
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 98 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 143
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L ++ C + ++ +D+ ++ + + +E + L+ +
Sbjct: 144 GMVGDLQKLGTS-CPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLL 201
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 202 VQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEV 242
>gi|281345331|gb|EFB20915.1| hypothetical protein PANDA_015792 [Ailuropoda melanoleuca]
Length = 723
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IH + S E H L +VG+D EW+P P+ S++Q+A +
Sbjct: 342 IHFLASWEDLA-RHEDELLQPGQVVGVDLEWRPSFG-TGGRPQASIMQVAVE-------- 391
Query: 71 SDESNASVVFLLDLSSIPLPS-------IWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
VFLLD+ + P+ L+ +L P I KLG+ DL L ++
Sbjct: 392 ------GRVFLLDVRVLSRPAGGQVSQAFSRLVSQLLSDPSITKLGYGMAGDLRSLGAS- 444
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLH---HKQLGRKLPKETKSLANICKELLDISLSKEL 180
C + ++ LD+ ++ + LGR + + L+ + +++L L K
Sbjct: 445 CPALAHVE-KQLRGSLDLLQVHRQMRAVDKPALGRGEARGLRGLSLLVQQVLGKPLDKSQ 503
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
Q S+W RPL+E Q YAA DA+CL+ ++
Sbjct: 504 QLSNWDRRPLSEGQLVYAAADAYCLLGVYQAL 535
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G D + + + R + +E R++LT LR Q
Sbjct: 596 RVVCDNMLQGLARSLRCLGADVLVLGAGE-DHRRAAEVARQEGRIILTSGLPYHKLRAQV 654
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ SL QQ V++ F + ++ + SRC CN
Sbjct: 655 GAGRCLSVDCSLKAQQQAKAVLKHFNVHVTRADIFSRCQACN 696
>gi|301781518|ref|XP_002926188.1| PREDICTED: LOW QUALITY PROTEIN: probable exonuclease mut-7 homolog
[Ailuropoda melanoleuca]
Length = 849
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 28/212 (13%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IH + S E H L +VG+D EW+P P+ S++Q+A +
Sbjct: 381 IHFLASWEDLA-RHEDELLQPGQVVGVDLEWRPSFG-TGGRPQASIMQVAVE-------- 430
Query: 71 SDESNASVVFLLDLSSIPLPSIWE-------LLKELFVSPDILKLGFKFKQDLIYLSSTF 123
VFLLD+ + P+ + L+ +L P I KLG+ DL L ++
Sbjct: 431 ------GRVFLLDVRVLSRPAGGQVSQAFSRLVSQLLSDPSITKLGYGMAGDLRSLGAS- 483
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLH---HKQLGRKLPKETKSLANICKELLDISLSKEL 180
C + ++ LD+ ++ + LGR + + L+ + +++L L K
Sbjct: 484 CPALAHVE-KQLRGSLDLLQVHRQMRAVDKPALGRGEARGLRGLSLLVQQVLGKPLDKSQ 542
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
Q S+W RPL+E Q YAA DA+CL+ ++
Sbjct: 543 QLSNWDRRPLSEGQLVYAAADAYCLLGVYQAL 574
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 31/190 (16%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G D + + + R + +E R++LT LR Q
Sbjct: 639 RVVCDNMLQGLARSLRCLGADVLVLGAGE-DHRRAAEVARQEGRIILTSGLPYHKLRAQV 697
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN------------------ 457
+ SL QQ V++ F + ++ + SRC CN
Sbjct: 698 GAGRCLSVDCSLKAQQQAKAVLKHFNVHVTRADIFSRCQACNCDQYLKVSKDMMKQLVWL 757
Query: 458 GRFIQKPLSTEEAVEAAKG------FQRIPDCLFDKN----LQFWQCMDCNQLYWEGTQY 507
+ P ST + A G +P+ + + F+ C C +++WEG+
Sbjct: 758 NSHQEGPSSTGASAPATLGNGTRLQLAGVPEGVLRRGGWGLRHFFCCTGCGKVFWEGSHL 817
Query: 508 HNAVQKFIDV 517
F +V
Sbjct: 818 GRITTHFSEV 827
>gi|255086371|ref|XP_002509152.1| predicted protein [Micromonas sp. RCC299]
gi|226524430|gb|ACO70410.1| predicted protein [Micromonas sp. RCC299]
Length = 1227
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 27/175 (15%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE---------------LIDQTSKEKRV 402
+F+ D + LA+ LRC+G+DA P P + L+ ++ RV
Sbjct: 1014 RFVADGSLGRLARWLRCLGVDA----EHVPVPAQRLGNKGNNNNCQYGALLALAQRDDRV 1069
Query: 403 LLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQ 462
+LT+D +LL+ + + + V+ +QL V F L+ +L++RC +CNG ++
Sbjct: 1070 ILTKDRRLLQRKDAVA--AFLVEDDDPKRQLARVSAHFGLRYRRGKLLTRCARCNG-AVE 1126
Query: 463 KPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
+ + EE AA G IP + +FW C C ++YW G + H A+ FID
Sbjct: 1127 RRCTPEEV--AANGA--IPAKVKASTNEFWACGRCEKVYWVGPKSHLAMS-FIDA 1176
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L+++C+ LL L K +C DWS RPLTE Q Y A DA L+ I
Sbjct: 627 GLSSVCQALLGQPLDKRERCGDWSRRPLTESQVAYGAQDARVLLRIM 673
>gi|16549645|dbj|BAB70838.1| unnamed protein product [Homo sapiens]
Length = 599
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 84 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 140
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE-------LLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 141 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 186
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L T C + ++ +D+ ++ + + +E + L+ +
Sbjct: 187 GMVGDLQKLG-TSCPALAHV-EKQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLL 244
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 245 VQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 289
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G+DA + R + +E R++LT LR Q
Sbjct: 354 RVVCDNMLQGLARSLRCLGVDARM-LGNGEDHRRAAEVARQEGRIILTSGQPFHKLRAQV 412
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ SL QQ V++ F ++++ + SRC CN
Sbjct: 413 GAGRCLSVDCSLKAQQQAKAVLKHFNVRVTHADIFSRCQACN 454
>gi|269928612|ref|YP_003320933.1| hypothetical protein Sthe_2697 [Sphaerobacter thermophilus DSM
20745]
gi|269787969|gb|ACZ40111.1| protein of unknown function DUF82 [Sphaerobacter thermophilus DSM
20745]
Length = 266
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ D + LA +LR +G D T + L ++ E+R+LLT+D LL+ +
Sbjct: 96 PRFVLDTHLGKLAGYLRLLGFD--TLYRNNYDDATLARISADERRILLTQDRGLLKRSAV 153
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
Y V++ +Q+ EV+ F L Q SRC +CNGR V A
Sbjct: 154 THG--YYVRAASPVEQVREVVRRFDLA-GLIQPFSRCLRCNGRL--------RPVPKAAV 202
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+R+P + +FW C C+++YW+G+ Y
Sbjct: 203 LERLPPRTRQEYEEFWLCERCDRVYWQGSHY 233
>gi|260802943|ref|XP_002596351.1| hypothetical protein BRAFLDRAFT_215559 [Branchiostoma floridae]
gi|229281606|gb|EEN52363.1| hypothetical protein BRAFLDRAFT_215559 [Branchiostoma floridae]
Length = 503
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 31/233 (13%)
Query: 5 YRKPLKIHL--VTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQ 62
Y+ PL + V TE + R L ++VGLDAEW+P + RVS++QLA +
Sbjct: 5 YQMPLHMEFIDVIGTEKGLSSCAQRLLQPGTMVGLDAEWRPSFGNTLITQRVSIVQLAIK 64
Query: 63 PGPRFNPESDESNASVVFLLDLSSI----PLPSIWELLKELFVSPDILKLGFKFKQDLIY 118
V++LD+ ++ + + + L S D++ +G+ D
Sbjct: 65 --------------DKVYILDMIALVQNTEMGKLQDFFSSLLASQDVIIIGYGIDGDFQM 110
Query: 119 LSSTF-------CSQGCDIGFDRVE---PYLDITSIYNHLHHKQLGRKLPK-ETKSLANI 167
L ++ + I V P L G K + L+ +
Sbjct: 111 LGRSYPFLREALSKRKSVIDLSHVHKANPALLTFDAGETTDDDFTGEASAKSDAHGLSQL 170
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
++ L + L+K Q SDW RPL + Q YA++DA+CL+E++++ +V G
Sbjct: 171 VQQCLGLPLAKTEQLSDWERRPLRKAQILYASLDAYCLLEVYDVLTKRVKDAG 223
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 28/202 (13%)
Query: 327 IVDSREKRLDDIG---DWQGPPPWDLSLGGD-----------------GYPKFLCDVMVE 366
+ D KR+ D G D++ P S G+ G +CD M++
Sbjct: 211 VYDVLTKRVKDAGIAIDFEAPAAGKKSTSGNSRSASAPGKPSSPPIRPGELSVVCDTMLQ 270
Query: 367 GLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT--RDAKLLRHQYLIKNQIYRV 424
G+ + LRC G+D + R + EKR++LT + LR Q +
Sbjct: 271 GMGRQLRCCGVDVRILENTDDHDRA-AEIARSEKRIILTCGMPYQTLRSQVGEGRCLCLD 329
Query: 425 KSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCL 484
+ +Q+L+V++ F +K+++ + SRC G + +S + AA+ + +
Sbjct: 330 SGVGPREQVLQVLQHFNVKVTQRDIFSRCQVGLGSSLCLHVSIGTSTVAARVVVSMGSFV 389
Query: 485 FDKNLQFWQCMDCNQLYWEGTQ 506
C L+W+ Q
Sbjct: 390 VAARAHL-----CADLWWQARQ 406
>gi|225450638|ref|XP_002278277.1| PREDICTED: uncharacterized protein LOC100254615 [Vitis vinifera]
gi|296089752|emb|CBI39571.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 36/201 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++G+D EWKP S +VS+LQ+A E A + L+ L++ +P +
Sbjct: 377 VLGIDCEWKPNYEKGSKPNKVSILQVA-----------SEKRAFIFDLIKLAT-DVPDVL 424
Query: 94 E-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
+ L + S ILKLG+ F+ D+ L+ ++ C F E LDI +++
Sbjct: 425 DNCLISILHSSRILKLGYNFQCDVNQLTQSYGELKC---FKHFEMLLDIQNMF------- 474
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
K P+ L+ + K++L L+K + S+W RPL++ Q YAA+DA L+ IF+
Sbjct: 475 ---KEPR--GGLSGLAKKVLGAGLNKTRRNSNWEQRPLSQHQLEYAALDAAVLVHIFS-- 527
Query: 213 QVKVAQKGNSCSSISELDSSN 233
KG+ ++ E + N
Sbjct: 528 ------KGSPATTFPEGQAKN 542
>gi|195155440|ref|XP_002018612.1| GL25861 [Drosophila persimilis]
gi|194114765|gb|EDW36808.1| GL25861 [Drosophila persimilis]
Length = 625
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+T + +F + L + ++ +D+EW +S ++ LLQ+A
Sbjct: 408 LITVDTATQFDLMLGHLQREHIIYMDSEWVQNVCGES---QLCLLQIATV---------- 454
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
N ++ L SI L ++F + +ILK+GF DL L + Q +
Sbjct: 455 -RNVYLIDCLARQSITADHWRALGADVFNNMNILKVGFSMYSDLTVLQRSLPLQ---LRL 510
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSDWSN 187
YLD+ +++ L ++ +LP + +L+++ L L+K QCS+W+N
Sbjct: 511 QLSHHYLDLRTLWLELKKQRYAIRLPFGNVNRAGDALSDLSLVCLGKKLNKSNQCSNWAN 570
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
RPL EQ YAAIDA CL+ I+N +V
Sbjct: 571 RPLRREQILYAAIDARCLMLIYNTLLNRV 599
>gi|21753501|dbj|BAC04356.1| unnamed protein product [Homo sapiens]
Length = 758
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 361 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 417
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE-------LLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 418 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 463
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L T C + ++ +D+ ++ + + +E + L+ +
Sbjct: 464 GMVGDLQKLG-TSCPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLL 521
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 522 VQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 566
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G+DA + R + +E R++LT LR Q
Sbjct: 631 RVVCDNMLQGLARSLRCLGVDARM-LGNGEDHRRAAEVARQEGRIILTSGQPFHKLRAQV 689
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ SL QQ V++ F ++++ + SRC CN
Sbjct: 690 GAGRCLSVDCSLKAQQQAKAVLKHFNVRVTHADIFSRCQACN 731
>gi|385808810|ref|YP_005845206.1| hypothetical protein IALB_0226 [Ignavibacterium album JCM 16511]
gi|383800858|gb|AFH47938.1| Hypothetical protein IALB_0226 [Ignavibacterium album JCM 16511]
Length = 251
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 32/180 (17%)
Query: 337 DIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQT 396
DI D Q P L PKF+CDV + LA++LR +GID + E E++ +
Sbjct: 85 DISDVQHLRPKPLR-----KPKFVCDVHLGKLARNLRMLGIDVCYKNNLSDE--EIVRIS 137
Query: 397 SKEKRVLLTRDAKLLR-----HQYLIKNQI--YRVKSLLKNQQLLEVIEAFQLKISEDQL 449
EKR +LTRD LL+ H Y ++N + +L+ QL ++I++F L
Sbjct: 138 LSEKRTILTRDIGLLKRSEVTHGYFVRNDDPEKQTSEVLQRFQLHKIIKSFTL------- 190
Query: 450 MSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
C +C + ++ ++ ++ ++ +PD + + +F+ C++C ++YW G+ + N
Sbjct: 191 ---CLECGNKLVR--VAKKDIIDL------LPDNVKKQQNKFFYCVNCKKIYWAGSHFKN 239
>gi|424513358|emb|CCO65980.1| predicted protein [Bathycoccus prasinos]
Length = 568
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 53/203 (26%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL---- 89
++GLD EWKP N P VSL Q+A + V+LLD+ + +
Sbjct: 145 VLGLDCEWKPG----DNTP-VSLFQVATREN--------------VYLLDVFAFMMDTGG 185
Query: 90 --------PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDR------- 134
+ LK LF + ++KLGF F D+ L ++ + DR
Sbjct: 186 GGEEKGTAEAFDAFLKLLFENETLIKLGFGFDYDIKRLRMSYAPLEETLSMDRRKKGWID 245
Query: 135 ---VEPYLDITSIYN---HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ D S +N + H K++G LA + +++L +L K+ Q SDWS R
Sbjct: 246 VRELAYTADAVSSHNKRKYKHQKRVG---------LAALTRDILKCNLDKKCQVSDWSQR 296
Query: 189 PLTEEQKNYAAIDAHCLIEIFNI 211
PL++ Q+ YAA DA+ LI I ++
Sbjct: 297 PLSDPQQRYAATDAYSLISILDV 319
>gi|145279204|ref|NP_060290.3| probable exonuclease mut-7 homolog [Homo sapiens]
gi|308153580|sp|Q8N9H8.3|MUT7_HUMAN RecName: Full=Probable exonuclease mut-7 homolog; AltName:
Full=Exonuclease 3'-5' domain-containing protein 3
Length = 876
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 361 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 417
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE-------LLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 418 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 463
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L T C + ++ +D+ ++ + + +E + L+ +
Sbjct: 464 GMVGDLQKLG-TSCPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLL 521
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 522 VQQVLGTALDKTQQLSNWDRRPLCEEQVIYAAADAYCLLEVHQAL 566
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G+DA + R + +E R++LT LR Q
Sbjct: 631 RVVCDNMLQGLARSLRCLGVDARM-LGNGEDHRRAAEVARQEGRIILTSGQPFHKLRAQV 689
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ SL QQ V++ F ++++ + SRC CN
Sbjct: 690 GAGRCLSVDCSLKAQQQAKAVLKHFNVRVTHADIFSRCQACN 731
>gi|119608789|gb|EAW88383.1| hypothetical protein FLJ20433, isoform CRA_c [Homo sapiens]
Length = 876
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 361 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 417
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE-------LLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 418 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 463
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L T C + ++ +D+ ++ + + +E + L+ +
Sbjct: 464 GMVGDLQKLG-TSCPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLL 521
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 522 VQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 566
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G+DA + R + +E R++LT LR Q
Sbjct: 631 RVVCDNMLQGLARSLRCLGVDARM-LGNGEDHRRAAEVARQEGRIILTSGQPFHKLRAQV 689
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ SL QQ V++ F ++++ + SRC CN
Sbjct: 690 GAGRCLSVDCSLKAQQQAKAVLKHFNVRVTHADIFSRCQACN 731
>gi|194878428|ref|XP_001974061.1| GG21519 [Drosophila erecta]
gi|190657248|gb|EDV54461.1| GG21519 [Drosophila erecta]
Length = 625
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ +F + L Q ++ LD+EW ++ ++ +LQ+A
Sbjct: 410 LIIVDKAEQFDRMLYHLQQEYVIYLDSEWMQSVCGEN---QLCVLQIA------------ 454
Query: 73 ESNASVVFLLD-LSSIPLPS-IWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L S W LL +F + +I K+GF DL L + Q
Sbjct: 455 --TGHNVYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ--- 509
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ S++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 510 LRLQMPHHYLDLRSLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 569
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAA+DA CL+ I+N +V+
Sbjct: 570 WANRPLRREQILYAAMDARCLLLIYNTLIARVS 602
>gi|384916679|ref|ZP_10016833.1| PIN-domain and Zn ribbon [Methylacidiphilum fumariolicum SolV]
gi|384525921|emb|CCG92706.1| PIN-domain and Zn ribbon [Methylacidiphilum fumariolicum SolV]
Length = 265
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ DV + LA++LR +G D S E +L D E+R+LLTRD LL+ + +
Sbjct: 114 KFILDVHLGTLARYLRLLGFDTLYNNSYSDE--QLADIAYAEERILLTRDPGLLKRKKV- 170
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Q Y V+++ Q +E++ F LK + RC +CNG ++V +
Sbjct: 171 -KQGYFVRAIEPRLQAIEILREFHLK-EKLHPFGRCLRCNGLL--------QSVNKIEIK 220
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYH 508
+P + + F +C C ++YW G+ YH
Sbjct: 221 NVVPPKVSETQSSFLKCQRCGRIYWPGSHYH 251
>gi|145345029|ref|XP_001417026.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577252|gb|ABO95319.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 497
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 34/184 (18%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+GLDAEW+P N P V+LLQ+A + VFL+DL + S E
Sbjct: 102 LGLDAEWRPG----DNTP-VALLQIATR--------------EEVFLIDLLATAPRSAGE 142
Query: 95 --------LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
LLK + S + KLGF F D+ + +++ + ++ +D+
Sbjct: 143 SLNVATDELLKAVLWSEGVYKLGFSFAYDVKRMKASYSH--LSVWEEKSRNLVDV----K 196
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
L + + K P LA + ++++ L K+ QCSDW RPLTE Q YAA D + L
Sbjct: 197 QLAYAAMPNKTPLRC-GLAVLTRQVIGCLLDKKEQCSDWGKRPLTESQMAYAAADGYSLC 255
Query: 207 EIFN 210
IF+
Sbjct: 256 LIFD 259
>gi|22759879|dbj|BAC10986.1| HBE269 [Homo sapiens]
Length = 514
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 41 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 97
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE-------LLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 98 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 143
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L T C + ++ +D+ ++ + + +E + L +
Sbjct: 144 GMVGDLQKLG-TSCPALAHV-EKQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLTLL 201
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 202 VQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 246
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 77/205 (37%), Gaps = 54/205 (26%)
Query: 366 EGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQYLIKNQIYR 423
+GLA+ LRC+G+DA + R + +E R++LT LR Q +
Sbjct: 290 QGLARSLRCLGVDARM-LGNGEDHRRAAEVARQEGRIILTSGQPFHKLRAQVGAGRCLSV 348
Query: 424 VKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN-------GRFIQK-----------PL 465
SL QQ V++ F ++++ + SRC CN R + K P
Sbjct: 349 DCSLKAQQQAKAVLKHFNVRVTHADIFSRCQACNCDQYLKVSRDMMKQLMWLSSHQEGPR 408
Query: 466 STEEAVEAAK---GFQR-------------IPDCLFDKN-LQ----------------FW 492
S+ A +AA + R PD L D LQ F+
Sbjct: 409 SSGPAPDAAPEGCTYDRPCRWLQMADLRAETPDMLADGTRLQLAGVPVGVLRTPGLRCFY 468
Query: 493 QCMDCNQLYWEGTQYHNAVQKFIDV 517
C C +++W+G+ F D+
Sbjct: 469 CCTGCGKVFWDGSHLGRVATHFRDM 493
>gi|357134047|ref|XP_003568631.1| PREDICTED: probable exonuclease mut-7 homolog [Brachypodium
distachyon]
Length = 523
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 28/178 (15%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++G+D EWKP S +VS++Q+A + A + L+ L ++
Sbjct: 338 IIGVDCEWKPNFEKGSRPNKVSIIQIA-----------SDKKAFIFDLIKLYEDDPKALD 386
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
+ + S ++LKLG+ + DL LS ++ C F E LDI
Sbjct: 387 CCFRRIMCSSNLLKLGYNLQCDLHQLSQSYGELQC---FQSYEMLLDI------------ 431
Query: 154 GRKLPKETKS-LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+KL KET L+ + K++L L+K + S+W RPL++ QK YAA+DA L+ IF+
Sbjct: 432 -QKLFKETTGGLSGLSKKILGAGLNKTRRNSNWEKRPLSQNQKEYAALDAVVLVHIFH 488
>gi|254168147|ref|ZP_04874994.1| conserved hypothetical protein [Aciduliprofundum boonei T469]
gi|197622913|gb|EDY35481.1| conserved hypothetical protein [Aciduliprofundum boonei T469]
Length = 151
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 16/143 (11%)
Query: 364 MVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYR 423
M+ LAK+LR +G D P + + LI +E+R+++TRD +L R ++ +
Sbjct: 1 MLGKLAKYLRFMGYDTYYPDGQLSD-NALIKIAKEEERIIITRDKELAR-----RSNGFL 54
Query: 424 VKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDC 483
VKS +QL EVIE F L + D L+SRC+ CN + P+ E+ + ++P
Sbjct: 55 VKSDNYEKQLREVIENFNL--NADDLLSRCSVCNEPLV--PVKKEDVKD------KVPVY 104
Query: 484 LFDKNLQFWQCMDCNQLYWEGTQ 506
+++ N +F+ C C ++YW GT
Sbjct: 105 VYEHNNEFYICPKCRRIYWYGTH 127
>gi|20129683|ref|NP_610094.1| nibbler [Drosophila melanogaster]
gi|75027007|sp|Q9VIF1.1|MUT7_DROME RecName: Full=Probable exonuclease mut-7 homolog; AltName:
Full=Exonuclease 3'-5' domain-containing protein 3
homolog
gi|7298759|gb|AAF53970.1| nibbler [Drosophila melanogaster]
gi|356461056|gb|AET07634.1| RE72821p1 [Drosophila melanogaster]
Length = 625
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ EF + L Q ++ LD+EW + ++ +LQ+A
Sbjct: 410 LIIVNKADEFDRMLYHLQQECVIYLDSEWMQSVCGDN---QLCVLQIA------------ 454
Query: 73 ESNASVVFLLD-LSSIPLPS-IWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L S W LL +F + +I K+GF DL L + Q
Sbjct: 455 --TGHNVYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ--- 509
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 510 LRLQMPHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 569
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAAIDA CL+ I+N +V+
Sbjct: 570 WANRPLRREQILYAAIDARCLMLIYNTLIERVS 602
>gi|345315003|ref|XP_001510635.2| PREDICTED: probable exonuclease mut-7 homolog, partial
[Ornithorhynchus anatinus]
Length = 846
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 49/212 (23%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +VG+D EWKP PRVS+LQ+A + VFLLDL +
Sbjct: 464 LQAGQVVGIDMEWKPSFGAVRK-PRVSILQMAVE--------------GHVFLLDLLEVS 508
Query: 89 LP-----------SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS-QGCDIGFDRVE 136
P + ++EL++ P I KLG+ DL L+S+ + + D +V+
Sbjct: 509 KPEDRRGEEEENEAFAHFIQELYLDPSITKLGYGMLGDLRNLASSGPALRDLD---KQVQ 565
Query: 137 PYLDITSIYNHLHHKQLGRK-------------------LPKETKSLANICKELLDISLS 177
LD+ I L + RK + K L+ + + +L L
Sbjct: 566 GVLDLFQIDKQLQKRPGQRKKSSRPVDVLAQDPGPEARGAKRAEKGLSLLVQRVLGKPLD 625
Query: 178 KELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
K Q SDW RPL Q YAA DA+CL+E++
Sbjct: 626 KAEQLSDWERRPLRPAQILYAASDAYCLLEVY 657
>gi|254168000|ref|ZP_04874848.1| conserved hypothetical protein [Aciduliprofundum boonei T469]
gi|197623043|gb|EDY35610.1| conserved hypothetical protein [Aciduliprofundum boonei T469]
Length = 151
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 16/143 (11%)
Query: 364 MVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYR 423
M+ LAK+LR +G D P + + LI +E+R+++TRD +L R ++ +
Sbjct: 1 MLGKLAKYLRFMGYDTYYPDGQLSD-NTLIKIAREEERIIITRDKELAR-----RSNGFL 54
Query: 424 VKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDC 483
VKS +QL EVIE F L + D L+SRC+ CN + P+ E+ + ++P
Sbjct: 55 VKSDNYEKQLREVIENFNL--NTDNLLSRCSVCNEPLV--PVKKEDVKD------KVPVY 104
Query: 484 LFDKNLQFWQCMDCNQLYWEGTQ 506
+++ N +F+ C C ++YW GT
Sbjct: 105 VYEHNNEFYMCPKCRRIYWYGTH 127
>gi|294814366|ref|ZP_06773009.1| DUF82 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
gi|326442758|ref|ZP_08217492.1| hypothetical protein SclaA2_16923 [Streptomyces clavuligerus ATCC
27064]
gi|294326965|gb|EFG08608.1| DUF82 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
Length = 244
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 27/174 (15%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P L +++E+RVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYENEDIGDP-ALAALSARERRVLLSRDRGLLRR 144
Query: 414 QYLIKNQ-IYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPL--STEEA 470
+ L IY K ++QL +V+E F ++ +RCT CNG PL + ++A
Sbjct: 145 RELWAGAYIYSDK---PDEQLRDVLERFAPVLAP---WTRCTACNG-----PLRDADKDA 193
Query: 471 VEA--AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
V+ +G QR D F QC C ++YW G H+A + I ++E
Sbjct: 194 VQERLEQGTQRTYDV-------FAQCSGCERVYWRGA--HHARLEAIVSAAMDE 238
>gi|338531029|ref|YP_004664363.1| hypothetical protein LILAB_06840 [Myxococcus fulvus HW-1]
gi|337257125|gb|AEI63285.1| hypothetical protein LILAB_06840 [Myxococcus fulvus HW-1]
Length = 262
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + L LR +G DA E L + E RVLL+RD +L+ +
Sbjct: 98 PRFILDVGLGRLVGFLRMLGFDALW--RNDFEDDVLARISHDEDRVLLSRDLGVLKRGEV 155
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
++ Y +S +QL+EV+ + L S + SRC CN L+ E E A
Sbjct: 156 LRG--YFPRSTDPAEQLVEVVRRYGL-TSRMRPFSRCVACNA-----ALTAAELSEVAG- 206
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
RIP+ + +++ +F QC C+++YW GT +H +Q +D
Sbjct: 207 --RIPERVAERHSRFQQCPGCHRVYWAGT-HHQRMQALVD 243
>gi|21428342|gb|AAM49831.1| GM01690p [Drosophila melanogaster]
Length = 625
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ EF + L Q ++ LD+EW + ++ +LQ+A
Sbjct: 410 LIIVNKADEFDRMLYHLQQECVIYLDSEWMQSVCGDN---QLCVLQIA------------ 454
Query: 73 ESNASVVFLLD-LSSIPLPS-IWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L S W LL +F + +I K+GF DL L + Q
Sbjct: 455 --TGHNVYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ--- 509
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 510 LRLQMPHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 569
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAAIDA CL+ I+N +V+
Sbjct: 570 WANRPLRREQILYAAIDARCLMLIYNTLIERVS 602
>gi|442317401|ref|YP_007357422.1| hypothetical protein MYSTI_00380 [Myxococcus stipitatus DSM 14675]
gi|441485043|gb|AGC41738.1| hypothetical protein MYSTI_00380 [Myxococcus stipitatus DSM 14675]
Length = 237
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 354 DGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
+G P+F+ DV + L+ LR +G D + + EL +S E R+LLTRD +L+
Sbjct: 79 EGVPRFVLDVGLGRLSGFLRMLGFDTLWRNDYRDD--ELARVSSSEARILLTRDIGVLKR 136
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ R +QL+EV+ + L SRC CN PLS E
Sbjct: 137 GEVRLGYFPRATD--PAEQLVEVVRRYGLGARMSPF-SRCIACN-----APLSPAAPHEV 188
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
R+P+ + +++ +F QC DC +++W GT + +Q +D
Sbjct: 189 VG---RVPEGVAERHTRFQQCPDCRRVFWAGT-HQERMQALVD 227
>gi|398787789|ref|ZP_10550094.1| hypothetical protein SU9_27004 [Streptomyces auratus AGR0001]
gi|396992752|gb|EJJ03850.1| hypothetical protein SU9_27004 [Streptomyces auratus AGR0001]
Length = 246
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 18/164 (10%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA ++ P L ++KE+RVLL+RD LLR
Sbjct: 91 GAPLRFLLDVHLGTLARRLRLLGVDAAY-TNEDPGDAALAALSAKEQRVLLSRDRGLLRR 149
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPL-STEEAVE 472
+ + + S + QL +V++ F +++ +RCT CNG S E +E
Sbjct: 150 REIWAGAF--IYSDRPDDQLRDVLDRFAPELAP---WTRCTACNGPLTDADKDSVREHLE 204
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
G QR D F QC C ++YW G +H+ ++ ++
Sbjct: 205 --HGTQRTYDV-------FAQCTACGRVYWRGA-HHSRLEAIVE 238
>gi|383853373|ref|XP_003702197.1| PREDICTED: probable exonuclease mut-7 homolog [Megachile rotundata]
Length = 938
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 32/200 (16%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L +VG+D+EWKP + ++L+Q+A + V++LD+
Sbjct: 400 LDTGLKSVFIVGIDSEWKP--CFGTKQTEIALIQIATETN--------------VYILDV 443
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF--CSQGCDIGFDRVEPYL 139
+++ P +W EL LF + +ILKLGF QD+ + + S+ G + Y+
Sbjct: 444 TTMGNKSPELWTELALTLFENKNILKLGFGIAQDMSVMRESLPALSKIKTHG----QGYV 499
Query: 140 DITSIYNHLHHKQLGRKLPKET------KSLANICKELLDISLSKELQCSDWSNRPLTEE 193
DI ++ L + P E+ +SL+ + + L L+K Q S+W RPL
Sbjct: 500 DIVHLWQILVN-DYKFVFPHESNDHCTKQSLSKLVELCLGQKLNKSDQFSNWEQRPLRSG 558
Query: 194 QKNYAAIDAHCLIEIFNIFQ 213
Q YAA+DA+CL+EI+ + +
Sbjct: 559 QITYAALDAYCLLEIYGVLE 578
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH-QYL 416
+ +CD M+ GL LR G D A + R L E RVLLTR+ L+ +YL
Sbjct: 716 RVVCDSMLGGLTSKLRMCGCDCAHVGFDQNGERSL-KIAVNENRVLLTRNKNYLQFSKYL 774
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG-RFIQKPLSTEEAVEAAK 475
N+ Y V + + QL EV+E F++ +++ + SRC CN F + P S + + K
Sbjct: 775 KPNRYYLVIADRPDDQLREVLEYFRVLVTQRDVFSRCQICNSDEFAKVPKSVMDKL--VK 832
Query: 476 GFQRI 480
F +I
Sbjct: 833 NFVKI 837
>gi|383319791|ref|YP_005380632.1| hypothetical protein Mtc_1360 [Methanocella conradii HZ254]
gi|379321161|gb|AFD00114.1| hypothetical protein Mtc_1360 [Methanocella conradii HZ254]
Length = 282
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKP---EPRELIDQTSKEKRVLLTRDAKLLRHQY 415
F+ D M+ L LR +G D + KP E + L++ KE+R+L++RD L+
Sbjct: 120 FIVDRMLGRLVAWLRILGYDTKSALDFKPSNAEDKALVEAAKKERRILVSRDRALVDAAK 179
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
VKS QL E+++ + L + D M+RCT CN + S + +
Sbjct: 180 KAGVDAVLVKSDDVKGQLEELMKRYPLDV--DPNMTRCTACNSTLREASGSDIDKIR--- 234
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
+ P L D FW C C ++YW+G+ + N ++
Sbjct: 235 --KEAPSHLIDSRASFWICNGCGKVYWQGSHWRNILK 269
>gi|389846170|ref|YP_006348409.1| hypothetical protein HFX_0699 [Haloferax mediterranei ATCC 33500]
gi|448616210|ref|ZP_21664920.1| hypothetical protein C439_06965 [Haloferax mediterranei ATCC 33500]
gi|388243476|gb|AFK18422.1| hypothetical protein HFX_0699 [Haloferax mediterranei ATCC 33500]
gi|445750865|gb|EMA02302.1| hypothetical protein C439_06965 [Haloferax mediterranei ATCC 33500]
Length = 173
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 336 DDIG-DWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAA---TPRSKKPEPRE 391
DD+G D G + G L DVM+ LA +LR G DAA T P +
Sbjct: 3 DDVGSDHPGTVASGIDQPSPGVTALLLDVMLGKLATYLRMCGYDAAYALTDDGSDPGDEQ 62
Query: 392 LIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQL--LEVIEAFQLKISEDQL 449
L+++T E RVLLTRD L Q R L + + + L +E+ IS D+
Sbjct: 63 LLERTKDEGRVLLTRDVTL-------AAQAPRSVLLAEREPIDQLRELESVGFDISLDEE 115
Query: 450 MSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
+RC CNG + L E +V A PD W+C+DC Q++W G+ +++
Sbjct: 116 PARCGVCNGPV--EALGDEASVPAYA-----PD---PSETTLWRCLDCGQVFWRGSHWYD 165
>gi|301627207|ref|XP_002942768.1| PREDICTED: probable exonuclease mut-7 homolog [Xenopus (Silurana)
tropicalis]
Length = 654
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 51/243 (20%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
KIH + S R L +VG+D EW+P VSL+QLA +
Sbjct: 269 KIHFLRSAGDLSVCR-ERVLKDGQVVGVDMEWRPMFGGLGK-QTVSLVQLALR------- 319
Query: 70 ESDESNASVVFLLDLSSIPLPS------------IWELLKELFVSPDILKLGFKFKQDLI 117
VFLLDL + P + +K+LF+ I KL + D+
Sbjct: 320 -------EEVFLLDLLQLNAPGAGANGTQRTREELIRFIKDLFLCAAITKLSYSVLGDIQ 372
Query: 118 YLSSTFCSQGCDIGFDR-VEPYLDITSIYNHLH---HKQLGRK----------------L 157
L +T +G ++ LD+ +++ L H+ G++
Sbjct: 373 NLEATDPEF---LGLEKQTRGILDLYTVHKQLQRVPHRPRGKREPVDVLADGPPSEDGLA 429
Query: 158 PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
P+ K L+ + +++L L K Q S+W RPL E+Q YAA DA+CL+E++++ + A
Sbjct: 430 PQSEKGLSLLVRDILGKPLDKTEQLSNWDKRPLREQQILYAAADAYCLLEVYDVLRQDPA 489
Query: 218 QKG 220
+ G
Sbjct: 490 RFG 492
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 299 KYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGP---PPWDLSLGGDG 355
++G L++C K+ + + R R +R + L D G G PP S+
Sbjct: 490 RFGLNPNLQQCPKSDSKANPEKRPRPKN-PGARRQNLPDTGSDTGAQPIPPRQFSV---- 544
Query: 356 YPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT--RDAKLLRH 413
+CD M++GL ++LRC+G+D E R+ + ++ RV+LT + LR
Sbjct: 545 ----ICDNMLQGLGRYLRCLGVDVLM-LDNDDEHRKAAEIARRDGRVILTCGLPYETLRS 599
Query: 414 QYLIKNQIYRVK-SLLKNQQLLEVIEAFQLKISEDQLMSRC 453
Q + + + + V S +Q ++V+ F ++++ + SRC
Sbjct: 600 Q-VGEGKCFSVDCSEKAREQAIKVLTHFNIRVALTDVFSRC 639
>gi|108763951|ref|YP_628639.1| hypothetical protein MXAN_0365 [Myxococcus xanthus DK 1622]
gi|108467831|gb|ABF93016.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 254
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 21/181 (11%)
Query: 335 LDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELID 394
+++ G GPP D P+F+ DV + L LR +G DA + L
Sbjct: 85 VEEPGVRVGPPLQDT-------PRFVLDVGLGRLVGFLRMLGFDALWRNDFADD--TLAR 135
Query: 395 QTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCT 454
+ E R+LL+RD +L+ +++ Y +S +QL+EV+ + L S SRC
Sbjct: 136 LSHDEDRILLSRDIGVLKRGEVLRG--YFPRSTDPAEQLVEVVRRYGL-TSRMHPFSRCV 192
Query: 455 KCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
CN L++ E E A RIP+ + +++ +F QC DC ++YW GT +H +Q
Sbjct: 193 ACNA-----ALTSAEPSEVAG---RIPERVAERHSRFQQCPDCQRVYWAGT-HHQRMQAL 243
Query: 515 I 515
+
Sbjct: 244 V 244
>gi|195352042|ref|XP_002042524.1| GM23271 [Drosophila sechellia]
gi|194124393|gb|EDW46436.1| GM23271 [Drosophila sechellia]
Length = 625
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ +F + L Q ++ LD+EW + ++ +LQ+A
Sbjct: 410 LIIVDKADQFDRMLYHLQQECVIYLDSEWMQSVCGDN---QLCVLQIATDHN-------- 458
Query: 73 ESNASVVFLLD-LSSIPLPS-IWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L S W LL +F + +I K+GF DL L + Q
Sbjct: 459 ------VYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ--- 509
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 510 LRLQMPHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 569
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAAIDA CL+ I+N +V+
Sbjct: 570 WANRPLRREQILYAAIDARCLLLIYNTLIARVS 602
>gi|195580608|ref|XP_002080127.1| GD21649 [Drosophila simulans]
gi|194192136|gb|EDX05712.1| GD21649 [Drosophila simulans]
Length = 422
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ +F + L Q ++ LD+EW + ++ +LQ+A
Sbjct: 207 LIIVDKADQFDRMLYHLQQECVIYLDSEWMQSVCGDN---QLCVLQIA------------ 251
Query: 73 ESNASVVFLLD-LSSIPLPS-IWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L S W LL +F + +I K+GF DL L + Q
Sbjct: 252 --TGHNVYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ--- 306
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 307 LRLQMPHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 366
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAAIDA CL+ I+N +V+
Sbjct: 367 WANRPLRREQILYAAIDARCLLLIYNTLIARVS 399
>gi|395770642|ref|ZP_10451157.1| hypothetical protein Saci8_12743 [Streptomyces acidiscabies 84-104]
Length = 240
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 17/155 (10%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+D A + +P L +++ EKRVLL+RD LLR
Sbjct: 83 GAPLRFLLDVHLGTLARRLRLLGVDTAYESTDIGDP-ALASRSAAEKRVLLSRDRGLLRR 141
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V QL E + F +S +RCT CNG + +P + EE +
Sbjct: 142 RELWAGAY--VYDTSPGTQLRETLTRFAPTLSP---WTRCTSCNG--LLRPATKEEVADR 194
Query: 474 AK-GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ G Q D F QC +C + YW+G +
Sbjct: 195 LREGTQASYDV-------FAQCGECGKAYWKGAHH 222
>gi|391325253|ref|XP_003737153.1| PREDICTED: uncharacterized protein LOC100901281 [Metaseiulus
occidentalis]
Length = 452
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 44/210 (20%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
+H V + +S + L++ S++G D+EWKP + R++LLQ+A +
Sbjct: 237 VHFVDTVDS--YLDAVEYLNECSILGFDSEWKPNKGPI----RMALLQVASEDK------ 284
Query: 71 SDESNASVVFLLD---LSSIPLPSIWELLKELFVSPDILKLGFKFKQD--LI--YLSSTF 123
VFL D L I W LLK +F P+ LKLGF + D L+ ++
Sbjct: 285 --------VFLFDVMALHKILTFGDWTLLKSIFTDPNKLKLGFDTRDDSKLLEDFMGPLS 336
Query: 124 CSQGCDIG-----FDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISL-- 176
S D+G +++ P +++ G P + L+ +C LL L
Sbjct: 337 MSSVTDMGVVMRAMEKLRP---------ECMYQRDGYVFPV-VRGLSRLCNILLGRPLNK 386
Query: 177 SKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
SK+L ++W RPL YAA+DAHCL+
Sbjct: 387 SKKLSMTNWEKRPLARSSLEYAALDAHCLV 416
>gi|125987467|ref|XP_001357496.1| GA21642 [Drosophila pseudoobscura pseudoobscura]
gi|54645828|gb|EAL34566.1| GA21642 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+T + +F + L + ++ +D+EW +S ++ LLQ+A
Sbjct: 408 LITVDTATQFDLMLGHLQREHIIYMDSEWVQNVCGES---QLCLLQIATV---------- 454
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
N ++ L SI L ++F + +ILK+GF DL L + Q +
Sbjct: 455 -RNVYLIDCLARQSITADHWRALGADVFNNMNILKVGFSMYSDLTVLQRSLPLQ---LRL 510
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSDWSN 187
YLD+ +++ L ++ +LP + +L+++ L L+K QCS+W+N
Sbjct: 511 QLSHHYLDLRTLWLELKKQRYAIRLPFGNVNRAGDALSDLSLVCLGKKLNKSNQCSNWAN 570
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
RPL +Q YAAIDA CL+ I+N +V
Sbjct: 571 RPLRRDQILYAAIDARCLMLIYNTLLNRV 599
>gi|392966632|ref|ZP_10332051.1| hypothetical protein BN8_03241 [Fibrisoma limi BUZ 3]
gi|387845696|emb|CCH54097.1| hypothetical protein BN8_03241 [Fibrisoma limi BUZ 3]
Length = 278
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ DV + LA HLR +G D + EL + + +LLTRD LL +
Sbjct: 127 RFVLDVHLGTLATHLRLMGFDTLYRNDYADD--ELARISHNDHWILLTRDRGLLMRS--L 182
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y V+ +QL++V++ F+L + +RC CNG P+S + +
Sbjct: 183 VEYGYFVRHTQPARQLIDVLQRFKLT-EHIRPFTRCLACNGEL--TPVSKADVQD----- 234
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
++P + QFWQC CN++YWEG +H + +F+D
Sbjct: 235 -QLPPKVRAYRHQFWQCSHCNRVYWEG-MHHQRMLQFVD 271
>gi|302535082|ref|ZP_07287424.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302443977|gb|EFL15793.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 245
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 18/163 (11%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P L +++ E+RVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYENEDIGDP-ALATRSAAEQRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPL-STEEAVE 472
+ + V S + QL +V+ F +++ +RCT CNG + S + +E
Sbjct: 145 REIFAGAY--VYSDNPDDQLRDVLGRFAPELAP---WTRCTACNGPLREADKDSVGDRLE 199
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
G QR D F QC DC ++YW G +H+ +++ +
Sbjct: 200 --HGTQRSYDV-------FAQCTDCERVYWRGA-HHSRLERIV 232
>gi|254382493|ref|ZP_04997852.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194341397|gb|EDX22363.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 245
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 28/168 (16%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P L +++ E RVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYENEDIGDP-ALATRSAAEHRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPL------ST 467
+ L V S ++QL +V+ F ++ +RCT CNG PL S
Sbjct: 145 RELFAGAY--VYSDNPDEQLRDVLSRFAPALAP---WTRCTACNG-----PLRDADKDSV 194
Query: 468 EEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
+ +E G QR D F QC DC ++YW G +H +++ +
Sbjct: 195 GDRLE--HGTQRSYDV-------FAQCADCERVYWRGA-HHARLERIV 232
>gi|449675992|ref|XP_002154256.2| PREDICTED: probable exonuclease mut-7 homolog [Hydra
magnipapillata]
Length = 610
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 5 YRKPLKIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
++ PLK ++ T P+ + L + ++G D EWKP + +VS LQLA
Sbjct: 343 FKLPLKDVIIVDT-IPKLIEAEKILFKPKQVIGFDTEWKPSFTRAGEQDKVSTLQLAV-- 399
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLP-----SIWELLKELFVSPDILKLGFKFKQDLIY 118
VF++D+ + + ++ E + F S D++K+G+ DL
Sbjct: 400 ------------IDKVFIVDMLQLYVADSAENALREFFYKFFTSKDVVKIGYGIVGDLKI 447
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLAN------ICKELL 172
L F I +D+ I + + +S+ N + LL
Sbjct: 448 LIGMFAYMKEFIL--NASNLVDLNEISEKILKYPVTNAYLYPVQSVQNEKGLSLLIYRLL 505
Query: 173 DISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
SL K Q SDW RPL+ Q YAA+DA CL+E++ +
Sbjct: 506 GQSLDKTFQVSDWDKRPLSTNQIQYAALDAFCLLEVYKV 544
>gi|186680861|ref|YP_001864057.1| hypothetical protein Npun_R0331 [Nostoc punctiforme PCC 73102]
gi|186463313|gb|ACC79114.1| protein of unknown function DUF82 [Nostoc punctiforme PCC 73102]
Length = 250
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F+ D+ + LA LR +G D T E +L +S + R+LLTRD LL +
Sbjct: 98 FVVDIHLGKLATSLRLLGFD--TLYRNDYEDEKLAQISSSQGRILLTRDKGLLMRSLVTH 155
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
Y V++ +Q++EV++ F L RC +CNG E V+ +
Sbjct: 156 G--YYVRNTNPQEQIIEVLQRFDL-FKLITPFKRCLRCNGLL--------EWVDKQSIIE 204
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
++P+ + + QF +C DC+++YW+G+ Y +Q+FID
Sbjct: 205 QVPEKVRSQIDQFQRCQDCDRIYWKGSHYER-LQQFID 241
>gi|434397415|ref|YP_007131419.1| protein of unknown function DUF82 [Stanieria cyanosphaera PCC 7437]
gi|428268512|gb|AFZ34453.1| protein of unknown function DUF82 [Stanieria cyanosphaera PCC 7437]
Length = 258
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 31/160 (19%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
PKF+ DV + LA LR +G D T E E+ + +KE R++LTRD +L +
Sbjct: 96 PKFILDVHLGKLASSLRMLGFD--TLYRNDYEDAEIAEIGAKETRIILTRDRGVLMRSVV 153
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG-------RFI--QKPLST 467
Y V+S +QQ++E+++ F L ++ + RC +CNG + I Q PL T
Sbjct: 154 TYG--YYVRSTKPSQQIVEILQQFNL-LNLVKPFQRCIRCNGILKAVDKKLILDQLPLQT 210
Query: 468 EEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+E QF +C +C+Q+YW+G+ +
Sbjct: 211 RREIE-----------------QFHRCNNCSQIYWQGSHF 233
>gi|359783171|ref|ZP_09286387.1| hypothetical protein PPL19_18967 [Pseudomonas psychrotolerans L19]
gi|359368822|gb|EHK69397.1| hypothetical protein PPL19_18967 [Pseudomonas psychrotolerans L19]
Length = 241
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 353 GDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLR 412
G G P+F+ D + LA+ LR G D + +P L D +E+R+LLTRD +LL+
Sbjct: 90 GAGRPRFVADAHLGALARRLRMAGFDTLYDNAYA-DP-ALADLARREERILLTRDRELLK 147
Query: 413 HQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
+ ++ V +L QL E+ + L+ SRC CN S+ +AV
Sbjct: 148 RRQVLHGCY--VHALRPEAQLQELYQRLGLR-PWALPFSRCLACN--------SSLQAVS 196
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
A+ R+P + +++ F C C++L+WEG+ +
Sbjct: 197 LAEVADRLPPRVRERHRHFLHCPHCDKLFWEGSHW 231
>gi|391336495|ref|XP_003742615.1| PREDICTED: probable exonuclease mut-7 homolog [Metaseiulus
occidentalis]
Length = 629
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 84/184 (45%), Gaps = 24/184 (13%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD---LSSIPLP 90
++G+DAEWKP R+SL+Q+A + V+L D LS P
Sbjct: 378 VIGVDAEWKPAMGLLQK-TRLSLIQMATR--------------QKVYLFDVLKLSETISP 422
Query: 91 SIWELLKE-LFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH-- 147
W E +F +P LGF +D+ L + + F + D +++ H
Sbjct: 423 EDWASFYERVFDNPTGCILGFGIAEDIRKLEALSGTSLYMTYFKDLMIVRD--ALFTHRP 480
Query: 148 -LHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
L + +K+ K L+ + LL L K QCSDW NRPL Q +YAA+DAHCLI
Sbjct: 481 DLMESVVDQKILKNHNGLSRLTCRLLGYPLDKSEQCSDWENRPLRPSQVHYAALDAHCLI 540
Query: 207 EIFN 210
++
Sbjct: 541 RCWD 544
>gi|428308021|ref|YP_007144846.1| hypothetical protein Cri9333_4556 [Crinalium epipsammum PCC 9333]
gi|428249556|gb|AFZ15336.1| protein of unknown function DUF82 [Crinalium epipsammum PCC 9333]
Length = 252
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 25/166 (15%)
Query: 343 GPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRV 402
PPP + PKF+ D+ + LA LR +G D E EL +S E+R
Sbjct: 94 APPPLPI-------PKFVIDIHLGKLATSLRMLGFDTLYRNDYGDE--ELAYISSTEERT 144
Query: 403 LLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQ 462
LLTR+ LL I Y V+S QQ+LEV++ F+L + RC +CNG
Sbjct: 145 LLTRNRGLLMRS--IVTYGYYVRSTNPQQQILEVMKRFEL-FKTAKPFDRCIRCNGLL-- 199
Query: 463 KPLSTEEAVEAAKGFQRIPDCL--FDKNLQFWQCMDCNQLYWEGTQ 506
E+V +IP + DK F +C++C+Q+YW+G+
Sbjct: 200 ------ESVAKESILDQIPPQVQQIDK---FHRCIECSQIYWKGSH 236
>gi|410979605|ref|XP_003996172.1| PREDICTED: probable exonuclease mut-7 homolog [Felis catus]
Length = 973
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IH + S E H L +VG+D EW+P P+ S++QLA +
Sbjct: 482 IHFLASWED-LARHEEALLQPGQVVGVDVEWRPSFG-TGGRPQASVMQLAVE-------- 531
Query: 71 SDESNASVVFLLDLSSIPLPSIWE-------LLKELFVSPDILKLGFKFKQDLIYLSSTF 123
VFL+DL + P+ + L+ L P + KLG+ DL L ++
Sbjct: 532 ------GRVFLMDLPVLSRPAGGQVSKAFSRLVSRLLSDPSVTKLGYGLAGDLRSLGAS- 584
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANICKELLDISLSKEL 180
C + ++ LD+ ++ + + G + + L+ + +++L L K
Sbjct: 585 CPALAHV-EKQLRGGLDLLRVHRQMRVVNMPAGGTYEARGLRGLSLLVQQVLGKPLDKTQ 643
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
Q S+W RPL+E Q YAA DA+CL+E+
Sbjct: 644 QLSNWDRRPLSEGQLVYAAADAYCLLEVHQAL 675
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M++GLA+ LRC+G D + + + R + +E R++LT LR Q
Sbjct: 738 RVVCDNMLQGLARSLRCLGADVRVLGTNE-DHRRAAEVARQEGRIILTSGLPYHKLRAQV 796
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
++ SL QQ V+ F ++++ + SRC CN
Sbjct: 797 GAGRCLWVDCSLKARQQAKAVLRHFNVRVTHADIFSRCQACN 838
>gi|403252520|ref|ZP_10918829.1| hypothetical protein EMP_02044 [Thermotoga sp. EMP]
gi|402812010|gb|EJX26490.1| hypothetical protein EMP_02044 [Thermotoga sp. EMP]
Length = 247
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 344 PPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVL 403
P W ++ G P+F+ D+ + L + LR +G +A +L + K+K +L
Sbjct: 84 PEDWLVTPRYRGEPRFVLDIHLGKLVRLLRMLGFEAIFGEESD---EKLCEMAVKKKAIL 140
Query: 404 LTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQK 463
L+RD LL+ + L+ Y V++ +QL+EV+E + LK + +RC +C +
Sbjct: 141 LSRDTGLLKRKELVFG--YYVRNTDPKKQLVEVVERYDLK-KWMKPFTRCIECGVELEEV 197
Query: 464 PLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
P +EAV++ R+P +++ +F +C C ++YW+G+ Y + V+
Sbjct: 198 P---KEAVKS-----RVPPKVYELFNEFARCPMCGRIYWKGSHYDHMVE 238
>gi|383824018|ref|ZP_09979203.1| hypothetical protein MXEN_04303 [Mycobacterium xenopi RIVM700367]
gi|383337938|gb|EID16311.1| hypothetical protein MXEN_04303 [Mycobacterium xenopi RIVM700367]
Length = 248
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + GLA+ LR +G D S + L D + ++R+LLTRD LL+ + +
Sbjct: 97 PRFVVDVNLGGLARLLRVLGFDVWF--SGDADDDTLADISLAQQRILLTRDRALLKRRAI 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
R +Q LEV+ L+ L +RC +CNG P++ +E ++ +
Sbjct: 155 THGLFVRAHD--PEEQTLEVLRRLDLRERLAPL-TRCVRCNGAL--APVTKDEVIDQLEP 209
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R +D +F +C DC Q+YW G+ Y
Sbjct: 210 LTR---RYYD---EFSRCADCGQIYWAGSHY 234
>gi|330789845|ref|XP_003283009.1| hypothetical protein DICPUDRAFT_146576 [Dictyostelium purpureum]
gi|325087081|gb|EGC40462.1| hypothetical protein DICPUDRAFT_146576 [Dictyostelium purpureum]
Length = 662
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 42/183 (22%)
Query: 34 LVGLDAEWKPQRSHQS--NFP-RVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLP 90
++G DAEW Q +Q +P +V+L+QL S+ + V+L+ +S +P
Sbjct: 171 IIGFDAEWSNQNQYQECEGYPHKVALIQL--------------SSKTDVYLIQISQ--MP 214
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTF--CSQGCDIGFDRVEPYLDITSIYNHL 148
+I + L+++ V P ++K+G QD + S+F ++GC +D+ I
Sbjct: 215 TIPQSLEQILVDPRLIKVGVAISQDAATIFSSFSIVTKGC----------VDLVPI---- 260
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAHCLI 206
GR + LA++ +L+ ++ K ++CS W N+ LT EQ YAAIDA
Sbjct: 261 -----GRLTNYQGNGLASLALNVLNANIDKNNLIRCSHWENKNLTSEQVMYAAIDAWIGR 315
Query: 207 EIF 209
EIF
Sbjct: 316 EIF 318
>gi|326930167|ref|XP_003211223.1| PREDICTED: probable exonuclease mut-7 homolog [Meleagris gallopavo]
Length = 916
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 96/215 (44%), Gaps = 54/215 (25%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
+ L +VG+D EWKP PRVSLLQLA + DE VFLLDL
Sbjct: 381 KVLQPGQIVGIDMEWKPSFGMVGK-PRVSLLQLAVR---------DE-----VFLLDLPQ 425
Query: 87 I-----------PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS--QGCDIGFD 133
+ LP I ++L + I KLG+ DL L++T CS +G D
Sbjct: 426 LLEQAEVKGEKEKLPHIIQML---YSDATITKLGYGMSGDLSSLAAT-CSTLKGMD---K 478
Query: 134 RVEPYLDITSIYNHLHHKQLGRK-------------------LPKETKSLANICKELLDI 174
+ + +D+ +I L + K L + K L+ + + +L
Sbjct: 479 QSQSVVDLLTIDKLLQKSSIDWKKGSLKVDALSPEQSCEDEGLRQPEKGLSLLVQHVLGK 538
Query: 175 SLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L K Q S+W RPL EEQ YAA DA+CL+E++
Sbjct: 539 PLDKTEQMSNWEKRPLREEQILYAASDAYCLLEVY 573
>gi|218885986|ref|YP_002435307.1| 3'-5' exonuclease [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756940|gb|ACL07839.1| 3'-5' exonuclease [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 201
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 83/200 (41%), Gaps = 39/200 (19%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFN 68
+I ++ S E E L ++G D E +P R + N P SL+QLAC
Sbjct: 28 EIRIIRSEE--ELADAVDRLRDEDVLGFDTETRPTFRKGKVNLP--SLVQLAC------- 76
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
+ VV+L L+ +P E L + DI+K G + D+ L F
Sbjct: 77 -------SDVVYLFQLNWLPFG---EALATVLSDADIVKTGVAVRDDIRDLQKLFAFNDA 126
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ + ++ R L ET L N+ L++ +SK QCS+WSNR
Sbjct: 127 GV-----------------VDLGEVARDLGLETHGLRNLAANFLEVRISKGAQCSNWSNR 169
Query: 189 PLTEEQKNYAAIDAHCLIEI 208
L +Q YAA DA EI
Sbjct: 170 ELAPQQVLYAATDAWVSREI 189
>gi|299473129|emb|CBN78705.1| Similarity to ribonuclease D (RNase D) [Ectocarpus siliculosus]
Length = 1260
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 31 QSSLVGLDAEWKPQRSHQSNFPRVSLLQLA-------------CQPGPRFNPESDESNAS 77
Q + +D EW+P R + V LLQLA C+P +S A+
Sbjct: 667 QQPALAVDCEWRPARVAGTPANPVCLLQLAAGERTFVVDMLHVCRP---------KSAAA 717
Query: 78 VVFLLDLSSIPLPSIWELLKE----LFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
++ ++ L LL+E + SP ++K+G K D L ++ C F
Sbjct: 718 ATDAVEETASGLTKREALLEEALGAVLGSPGVVKVGLGPKADFQSLIRSYPHMPC---FR 774
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
RV +++ + ++ L K E SL+ +C +L L K QCSDW NRPL+
Sbjct: 775 RVCGVVNLCHVASNA--SSLRGKPADEKASLSRLCNVVLGKPLDKSEQCSDWGNRPLSGR 832
Query: 194 QKNYAAIDAHCLI 206
QK YAA+DA +
Sbjct: 833 QKRYAALDARATL 845
>gi|335281300|ref|XP_003122404.2| PREDICTED: probable exonuclease mut-7 homolog [Sus scrofa]
Length = 1150
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 27/196 (13%)
Query: 24 HLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD 83
H A L +V +D EW+P P+ SL+Q+A + VFLLD
Sbjct: 667 HEAELLQPGQVVSVDLEWRPSFG-VGGRPQASLMQVAVE--------------GRVFLLD 711
Query: 84 LSSIPLPS-------IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
L + P+ +L+ L P I KLG+ DL L ++ C ++
Sbjct: 712 LPQLLSPARGQEPQAFSQLVSRLLADPSITKLGYGMAGDLRSLGAS-CP-ALAQAQKQLR 769
Query: 137 PYLDITSIYNHLH---HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
LD+ ++ L G + L+ + +++L L K Q S+W RPL EE
Sbjct: 770 GSLDLLQVHKQLRVVDAPAPGVDGAAGPRGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEE 829
Query: 194 QKNYAAIDAHCLIEIF 209
Q YAA DA+CL+E++
Sbjct: 830 QLVYAAADAYCLLEVY 845
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 86/229 (37%), Gaps = 67/229 (29%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQY-L 416
+ +CD M++GLA+ L C+G+D + + + R + +E R++LT + Q L
Sbjct: 905 RVVCDSMLQGLARRLLCLGVDVLVLGTGE-DHRRAAEVARQEGRIVLTSGLPYHKLQAQL 963
Query: 417 IKNQIYRVK-SLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN------------------ 457
+ V SL QQ VI F +++++D + SRC CN
Sbjct: 964 GAGRCLAVDCSLKAQQQAKAVIRHFNVRVTQDDIFSRCQACNCDQYLKVSKDMMKQLVRL 1023
Query: 458 -------GRFIQKPLSTEEAVEAAKGFQRIPD-CLFD--------KNLQ----------- 490
GR ++ +E+ +E + P C +D +LQ
Sbjct: 1024 SGHREGPGRTGEEAAQSEDELETGSAPEEPPGPCTYDPPCRWLEEADLQTRVPATLGSGA 1083
Query: 491 -------------------FWQCMDCNQLYWEGTQYHNAVQKFIDVCKL 520
F+ C C +++WEG+ F D+ ++
Sbjct: 1084 QLQLSGVPAGVLRRPGLRHFYCCTGCGKVFWEGSHLRRVAANFRDILQM 1132
>gi|269128155|ref|YP_003301525.1| hypothetical protein Tcur_3958 [Thermomonospora curvata DSM 43183]
gi|268313113|gb|ACY99487.1| protein of unknown function DUF82 [Thermomonospora curvata DSM
43183]
Length = 243
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL DV + LA+ +R +G+D A + +P L++Q ++E+RVLLT+D LLR + L
Sbjct: 88 PRFLLDVHLGTLARRMRLLGLDTAY-HNDMDDP-ALVEQANRERRVLLTQDRGLLRRRKL 145
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V+ + QL +V+E F + +RCT CNG + EA E G
Sbjct: 146 WLGAY--VRGSRPDDQLRDVLERFAPPLRP---WTRCTACNGELAPVDKADVEA-ELEDG 199
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
+R D + +C C ++YW G
Sbjct: 200 TRRTYDV-------YGRCAGCGRIYWRGAH 222
>gi|354568323|ref|ZP_08987488.1| protein of unknown function DUF82 [Fischerella sp. JSC-11]
gi|353540686|gb|EHC10159.1| protein of unknown function DUF82 [Fischerella sp. JSC-11]
Length = 248
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D+ + LA LR +G D T + EL +S + R+LLTRD LL +
Sbjct: 97 RFVLDIHLGKLASSLRLLGFD--TLYQNDYDDPELAAISSSQNRILLTRDKGLLMRGAVT 154
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y V++ +Q++EV+ F L RC +CNG ++V+
Sbjct: 155 YG--YYVRNTDPQKQIVEVLRRFNL-FELASPFKRCLRCNGVL--------QSVDKQAVI 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
++PD + +F +C +C Q+YW+G+ Y +Q+FID
Sbjct: 204 DQLPDTVVLYTDEFHRCQNCAQIYWKGSHYER-LQRFID 241
>gi|453077616|ref|ZP_21980354.1| hypothetical protein G419_19905 [Rhodococcus triatomae BKS 15-14]
gi|452758198|gb|EME16590.1| hypothetical protein G419_19905 [Rhodococcus triatomae BKS 15-14]
Length = 257
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA LR +G D E L+ + E R+LLTRD LLR +
Sbjct: 108 PRFVADVHLGRLASLLRLLGFDCRYENDGADE--ALVAVSVTETRILLTRDVGLLRRSAV 165
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V + QL E+++ F L+ +RC +CNG + P+
Sbjct: 166 THGAF--VHATDPRLQLREILDRFDLR-GRIAPFTRCARCNGVLV--PVDRAAVT----- 215
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
+PD + +++ +F +C C Q+YW GT
Sbjct: 216 ---VPDSVAERHTRFTRCDGCGQVYWPGTH 242
>gi|448589969|ref|ZP_21650028.1| hypothetical protein C453_05849 [Haloferax elongans ATCC BAA-1513]
gi|445735084|gb|ELZ86637.1| hypothetical protein C453_05849 [Haloferax elongans ATCC BAA-1513]
Length = 183
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 18/160 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAA---TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ 414
+FL DVM+ LA +LR G D A P L+D+ ++E RVLLTRD L
Sbjct: 36 RFLLDVMLGKLATYLRMCGYDTAYALDEHDTDPGDSTLLDRAAEESRVLLTRDVSLAER- 94
Query: 415 YLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
++ V S QL E +E+ I+ D+ +RC CNG EE + A
Sbjct: 95 ---ASRSVLVASKRPLHQLRE-LESVGFDIALDEEPTRCGVCNG-------PVEELGDDA 143
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
+ P D + W+C DC Q++W G+ + + +
Sbjct: 144 PIPEYAPS---DGETRLWRCRDCGQVFWRGSHWRDVESRL 180
>gi|448579985|ref|ZP_21644814.1| hypothetical protein C455_17741 [Haloferax larsenii JCM 13917]
gi|445722658|gb|ELZ74315.1| hypothetical protein C455_17741 [Haloferax larsenii JCM 13917]
Length = 201
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAA---TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ 414
+FL DVM+ LA +LR G D A P L+D+ ++E RVLLTRD L +
Sbjct: 54 RFLLDVMLGKLATYLRMCGYDTAYALDEHDTDPGDSTLLDRAAEESRVLLTRDVSLA--E 111
Query: 415 YLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
+ + K L QL E +++ IS D+ +RC CNG K L +E +
Sbjct: 112 RAPSSVLLATKRPL--DQLRE-LDSVGFDISLDKKPARCGVCNGTV--KELGNDEPIP-- 164
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
+ P D+ W+C DC Q++W G+ + +
Sbjct: 165 ---EYAP---SDRGTTLWRCRDCGQVFWRGSHWRD 193
>gi|432328611|ref|YP_007246755.1| hypothetical protein AciM339_0709 [Aciduliprofundum sp. MAR08-339]
gi|432135320|gb|AGB04589.1| hypothetical protein AciM339_0709 [Aciduliprofundum sp. MAR08-339]
Length = 143
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 364 MVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYR 423
M+ LAK+LR +G D P + + E+I+ + E R++LTRD +L R ++ +
Sbjct: 1 MLGKLAKYLRFLGYDTYYPSGRMSDD-EIIEISKIENRIILTRDKELAR-----RSGGFY 54
Query: 424 VKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDC 483
++S +QL VI F L S+D ++SRC+ CN I P++ E + ++P
Sbjct: 55 IESENYEEQLKIVIRKFNL--SKDNMLSRCSICNEPLI--PVNKESVRD------KVPKY 104
Query: 484 LFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
++D +F+ C C ++YW GT +K + + E
Sbjct: 105 VYDHRDEFYICPKCGRVYWWGTHTEKIERKIRKIMEARE 143
>gi|347731627|ref|ZP_08864719.1| 3'-5' exonuclease family protein [Desulfovibrio sp. A2]
gi|347519577|gb|EGY26730.1| 3'-5' exonuclease family protein [Desulfovibrio sp. A2]
Length = 201
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 37/181 (20%)
Query: 29 LSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
L ++G D E +P R + N P SL+QLAC + VV+L L+ +
Sbjct: 45 LRDEDVLGFDTETRPTFRKGKVNLP--SLVQLAC--------------SDVVYLFQLNWL 88
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
P + L + PDI+K G + D+ L + +
Sbjct: 89 PFG---DALASVLSDPDIVKTGVAVRDDIRDLQKLYAFNDAGV----------------- 128
Query: 148 LHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIE 207
+ ++ R L ET L N+ L++ +SK QCS+WSNR L +Q YAA DA E
Sbjct: 129 VDLGEVARDLGLETHGLRNLAANFLEVRISKGAQCSNWSNRELAPQQVLYAATDAWVSRE 188
Query: 208 I 208
I
Sbjct: 189 I 189
>gi|242022456|ref|XP_002431656.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516964|gb|EEB18918.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 734
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 11 IHLVTSTESPEFTHLARALSQS-SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
I+L+ ST S F+ ++ +VGLDAEWKP + + ++L Q+A +
Sbjct: 356 IYLIDSTCS--FSKFLIDITDGVKVVGLDAEWKPCFGLKKS--ELALFQIATR------- 404
Query: 70 ESDESNASVVFLLD---LSSIPLPSIWELLKE-LFVSPDILKLGFKFKQDLIYLSSTFCS 125
VV+LLD LSS+ ++W E LF +P+ILKLGF + D +
Sbjct: 405 -------HVVYLLDIIALSSVVPENLWIRFSEILFGNPNILKLGFGLQGDFTIIQEKLLG 457
Query: 126 -QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKEL-LDISLSKELQCS 183
G I + LD+ ++ L + S N E L L K Q S
Sbjct: 458 LHGIIIPETSL---LDLEILWRVLQNNNFTFPHAASVSSTLNSFIEFCLGEKLDKSNQFS 514
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
DW RPL Q YAA+DA+CL+E +++
Sbjct: 515 DWEKRPLRHSQIVYAALDAYCLLEAYDV 542
>gi|383649971|ref|ZP_09960377.1| hypothetical protein SchaN1_31693 [Streptomyces chartreusis NRRL
12338]
Length = 241
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FL DV + LA+ LR +G+D A + +P L +++ E+RV+L+RD LLR + L
Sbjct: 91 FLLDVHLGTLARRLRLLGVDTAYESTDIGDP-ALAARSAAERRVMLSRDRGLLRRRELWA 149
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
V S +QL +V++ FQ E + +RCT CNG +++ E A + G
Sbjct: 150 GAF--VYSTRPEEQLRDVLDRFQ---PELRPWTRCTACNG-LLRQASKDEVADQLKHGTH 203
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
D F QC C + YW+G +H ++ ++
Sbjct: 204 ATYDV-------FAQCTACGRAYWKGA-HHEQLEAIVE 233
>gi|255089332|ref|XP_002506588.1| predicted protein [Micromonas sp. RCC299]
gi|226521860|gb|ACO67846.1| predicted protein [Micromonas sp. RCC299]
Length = 1038
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 59/216 (27%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI------ 87
+VGLDAEW+P + V+LLQ+A + FL+D++S+
Sbjct: 591 VVGLDAEWRPHKHSP-----VALLQVATR--------------REAFLVDVASLMRRDEG 631
Query: 88 -------------PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDR 134
+ L++L +PD+++LGF F+ DL L + + + R
Sbjct: 632 GDRYDRYDDRYDANAEAFDAFLRDLLDAPDVVRLGFGFEYDLSRLRRGYAGRLSSLERRR 691
Query: 135 VEPYLDIT-----SIYNHLHHKQLGRKL-----------PKETK----SLANICKELLDI 174
+ T + + H LG ++ P + K LA + +L
Sbjct: 692 ENANDEDTDERRVNEFGETGH-ALGTRIVDVKALALCAFPDKQKLTRVGLATLVASVLGA 750
Query: 175 SLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+ K QCSDW RPLT +Q +YAA DAH L +F+
Sbjct: 751 YVDKTEQCSDWERRPLTTDQVDYAAADAHVLTVLFD 786
>gi|441166394|ref|ZP_20968716.1| hypothetical protein SRIM_32196, partial [Streptomyces rimosus
subsp. rimosus ATCC 10970]
gi|440615907|gb|ELQ79071.1| hypothetical protein SRIM_32196, partial [Streptomyces rimosus
subsp. rimosus ATCC 10970]
Length = 224
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA + +P L +++ E+RVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYESTDIGDP-ALAARSAAERRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLST-EEAVE 472
+ V S ++QL +V+ F +++ +RCT CNG + T EE +E
Sbjct: 145 RENWAGAF--VYSDRPDEQLRDVLGRFAPELAP---WTRCTACNGLLKEAEKGTVEERLE 199
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
G +R D F QC C ++YW+G
Sbjct: 200 G--GTRRTYDV-------FAQCTACGRVYWQGAH 224
>gi|149196457|ref|ZP_01873512.1| hypothetical protein LNTAR_14907 [Lentisphaera araneosa HTCC2155]
gi|149140718|gb|EDM29116.1| hypothetical protein LNTAR_14907 [Lentisphaera araneosa HTCC2155]
Length = 372
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 88/196 (44%), Gaps = 36/196 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L+RALS+ + LD E+ ++ P LLQ+ +A + L+DL
Sbjct: 14 LSRALSEKD-IALDTEFVWTKTFH---PIPGLLQI--------------KSAGEIHLIDL 55
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
P E+LKEL S D+ K+ QDL L FC FD Y +
Sbjct: 56 LIENFPK--EILKELLESRDVCKILHSPDQDL-KLFKLFCDAEAKNIFDTQLAYAFTGA- 111
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
PK+ SLA +C E++DI +SK Q SDW+ RPL + Q NYAA D
Sbjct: 112 -------------PKQV-SLAKLCLEMMDIEISKTQQVSDWTKRPLKDSQLNYAAEDVRY 157
Query: 205 LIEIFNIFQVKVAQKG 220
LIEI + K+ + G
Sbjct: 158 LIEITETLREKLKENG 173
>gi|290957882|ref|YP_003489064.1| hypothetical protein SCAB_34161 [Streptomyces scabiei 87.22]
gi|260647408|emb|CBG70513.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 216
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+D A + +P L +++ E+RVLL+RD LLR
Sbjct: 59 GAPLRFLLDVHLGTLARRLRLLGVDTAYESTDIGDP-ALATRSATEQRVLLSRDRGLLRR 117
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S +QL EV+ F + +RCT CNG + KP + ++ +
Sbjct: 118 RELWAGAY--VYSTHPEEQLAEVLARFAPDLHP---WTRCTACNG--LLKPATKDQVADR 170
Query: 474 AK-GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ G Q+ D F QC C + YW+G +
Sbjct: 171 LEGGTQKSYDV-------FAQCDTCGRAYWKGAHH 198
>gi|167044815|gb|ABZ09483.1| putative protein of unknown function DUF82 [uncultured marine
crenarchaeote HF4000_APKG8D6]
Length = 156
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 16/155 (10%)
Query: 364 MVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRD---AKLLRHQYLIKNQ 420
M+ LAK LR +G D T S K E+I T +++R+LLT+D AKL + +
Sbjct: 1 MLGKLAKKLRLLGYD--TFYSSKVFDDEIIIMTKEQERILLTKDSLLAKLAQRNNIKTVN 58
Query: 421 IYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRI 480
I L + +Q+ E + + I + +SRC+ CNG+ + + + ++
Sbjct: 59 ISEDDELGQFRQINEKVSFSRFSI--EGKISRCSICNGKL--------SHIYSDRVIGKV 108
Query: 481 PDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
PD + + +FW+C +C ++YWEGT N +QKF+
Sbjct: 109 PDGVINNFKEFWECNECKKIYWEGTHTKN-LQKFV 142
>gi|78357431|ref|YP_388880.1| 3'-5' exonuclease [Desulfovibrio alaskensis G20]
gi|78219836|gb|ABB39185.1| 3'-5' exonuclease [Desulfovibrio alaskensis G20]
Length = 201
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 37/183 (20%)
Query: 27 RALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLS 85
RAL L+G D E +P R + N P SL+Q A + +V+L+ L
Sbjct: 43 RALHSEELIGFDTETRPTFRKGKMNLP--SLIQFAAR--------------DMVYLIHLG 86
Query: 86 SIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIY 145
+ E ++++ SP I+K G + D+ L C + + +D+
Sbjct: 87 WVAFS---EGIQDVLSSPHIVKTGVAVRDDIKDLKKLACFEDAAV--------VDL---- 131
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
++ R+L ET L N+ LL+ +SK QCS+WSN L+ +Q +YAA DA
Sbjct: 132 -----GEVARELGMETHGLRNLAANLLEFRISKAAQCSNWSNLELSRQQISYAATDAWVS 186
Query: 206 IEI 208
EI
Sbjct: 187 REI 189
>gi|315231028|ref|YP_004071464.1| hypothetical protein TERMP_01265 [Thermococcus barophilus MP]
gi|315184056|gb|ADT84241.1| hypothetical protein TERMP_01265 [Thermococcus barophilus MP]
Length = 152
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 19/158 (12%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
PK + D+M+ LA+ LR G D + E+I+ KE R++LTRD +L +
Sbjct: 3 PKLIADMMLGRLARWLRLYGYDTVYGVK---DDDEIIEIAKKEGRIILTRDEELAKRA-- 57
Query: 417 IKNQIYRVKSLLKNQ--QLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
KN I + + Q QL+E+ F E+ +RC KCNG + P +E ++
Sbjct: 58 -KNAILISSNKFEEQIKQLMELGFTFNELFPEN---ARCPKCNGLIKEIP---KEKIK-- 108
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
++P +++K +F+ C +C Q+YW G Q+ V+
Sbjct: 109 ---DKVPPGVYEKYNEFYICTECGQIYWPGRQWQEMVK 143
>gi|308801591|ref|XP_003078109.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
gi|116056560|emb|CAL52849.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
Length = 1313
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 41/202 (20%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFP-----RVSLLQLACQPGPRFNPESDESNASVVFL 81
R L ++G+D EW ++ V++LQ+A Q G V +
Sbjct: 373 RYLWNQGMIGIDTEWGADVGEDADNADRSGDEVAILQIASQLG--------------VVI 418
Query: 82 LD----LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
LD L S P ++ + ++F ++LKLGF ++DL LS C F V+
Sbjct: 419 LDVPKLLYSCP-DTLETTIGKMFEDEEVLKLGFAVQEDLRRLSK------CHKAFKTVQG 471
Query: 138 YLDITSIYNHLHHKQLGRKL--PKETKS---------LANICKELLDISLSKELQCSDWS 186
+D+ ++ L K R + P T++ L+ + +L L K ++ SDWS
Sbjct: 472 VVDLQKLWKLLVSKARTRSVSAPWSTEAELLRYQPVGLSALVAAVLGKPLDKMMRMSDWS 531
Query: 187 NRPLTEEQKNYAAIDAHCLIEI 208
RPLT+ Q YAA+DA L+E+
Sbjct: 532 RRPLTQSQMEYAALDAWTLVEV 553
>gi|254410271|ref|ZP_05024051.1| conserved hypothetical protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196183307|gb|EDX78291.1| conserved hypothetical protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 248
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 18/161 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D+ + LA LR +G D R+ +P EL ++ E+R+LLTRD +LL +
Sbjct: 97 RFVLDIHLGKLANALRLLGFDTLY-RNDYADP-ELAQVSADEQRILLTRDTRLLMRSMVS 154
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM--SRCTKCNGRFIQKPLSTEEAVEAAK 475
Y V+S ++Q++EV+ F L D ++ RC +CNG E VE
Sbjct: 155 YG--YYVRSKNPDEQIVEVLRRFNLF---DAILPFHRCIRCNGVL--------EPVEKDA 201
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
++P+ +F +C C Q+YW+G+ + +Q+FI+
Sbjct: 202 IADQLPEKTRQSIDEFHRCQTCQQIYWQGSHFER-MQQFIE 241
>gi|383459597|ref|YP_005373586.1| hypothetical protein COCOR_07635 [Corallococcus coralloides DSM
2259]
gi|380731648|gb|AFE07650.1| hypothetical protein COCOR_07635 [Corallococcus coralloides DSM
2259]
Length = 252
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + L+ LR +G D + +L + E+RVLLTRD +L+ +
Sbjct: 97 PRFILDVGLGRLSGFLRMLGFDTLWRNDSADD--QLARLSHDEERVLLTRDLGVLKRSEV 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ Y + QL+EV+ + L S + SRC CN PLST E +G
Sbjct: 155 VLG--YFPRETDPAHQLVEVVRRYGL-TSRMRPFSRCIACNA-----PLSTATP-EEVQG 205
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCK 519
R+P+ + ++ +F QC C +++W GT +H +Q ++ +
Sbjct: 206 --RVPEGVTQRHSRFQQCPGCQRVFWPGT-HHERMQNLVETLR 245
>gi|218247809|ref|YP_002373180.1| hypothetical protein PCC8801_3040 [Cyanothece sp. PCC 8801]
gi|218168287|gb|ACK67024.1| protein of unknown function DUF82 [Cyanothece sp. PCC 8801]
Length = 261
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D+ + LA +R +G D + E EL + + ++KR LLTRD LL+ +I
Sbjct: 98 RFVLDIHLGKLATQMRLLGFDVLYENNYDDE--ELAEISHQQKRYLLTRDIALLKRSRVI 155
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRF--IQKPLSTEEAVEAAK 475
Y ++ QL+EV+ F L S+ RC +CNG ++K L E+ K
Sbjct: 156 YG--YWIRGKNTEAQLIEVLNRFDL-FSDISPFKRCLRCNGLITSVEKQLIQEQLEPLTK 212
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ +F+QC C Q+YW+G+ Y
Sbjct: 213 ----------EHYHEFYQCTKCAQIYWKGSHY 234
>gi|448481723|ref|ZP_21605053.1| hypothetical protein C462_06670 [Halorubrum arcis JCM 13916]
gi|445821670|gb|EMA71457.1| hypothetical protein C462_06670 [Halorubrum arcis JCM 13916]
Length = 184
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQY 415
P+ L DVM LA +LR G DAA + E + L+ + E+RVLLTRD +L
Sbjct: 21 PRILLDVMCGKLATYLRLCGYDAAYALDRGVEADDRLLSLAAAERRVLLTRDRELAERAS 80
Query: 416 LIKNQIYRVKSLLKNQQ----LLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAV 471
+ R ++L ++ L ++A L + +RC CNG P+ A
Sbjct: 81 TTADADPRPAAVLLTERDVIDQLRELDAAGLPVELADEPTRCGSCNG-----PVERVGAP 135
Query: 472 EAAKGFQRIPDCLFD---KNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
EA PD + D + W+C +C Q +W+G + + + D+
Sbjct: 136 EANAAPTDRPDYVPDDVGSDRPGWRCTECGQWFWKGGHWDDVAARLDDL 184
>gi|448604354|ref|ZP_21657606.1| hypothetical protein C441_06414 [Haloferax sulfurifontis ATCC
BAA-897]
gi|445744514|gb|ELZ95990.1| hypothetical protein C441_06414 [Haloferax sulfurifontis ATCC
BAA-897]
Length = 188
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 84/201 (41%), Gaps = 42/201 (20%)
Query: 336 DDIG-DWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAA-------------- 380
DD+G D G + G G L DVM+ LA +LR G DA
Sbjct: 3 DDVGPDHPGTVASGVDRGAPGDTALLLDVMLGKLATYLRMCGYDAEYALDGRDETEDGAD 62
Query: 381 TPRSKKPEPRE--LIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQ----LL 434
R + +P + L+ + E RVLLTRD +L +S+L +++ L
Sbjct: 63 GARDARTDPGDDGLLARADAEGRVLLTRDVRLAERA---------PRSVLLSEREPIAQL 113
Query: 435 EVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFD-KNLQFWQ 493
+E+ +S D+ SRC CNGR VEA + +PD D W+
Sbjct: 114 RELESVGFAVSLDEEPSRCGVCNGR-----------VEAVSRGESVPDYAPDPAETALWR 162
Query: 494 CMDCNQLYWEGTQYHNAVQKF 514
C DC Q++W G+ + + +
Sbjct: 163 CRDCGQVFWRGSHWRDVAARL 183
>gi|408678875|ref|YP_006878702.1| DUF82 domain-containing protein [Streptomyces venezuelae ATCC
10712]
gi|328883204|emb|CCA56443.1| DUF82 domain-containing protein [Streptomyces venezuelae ATCC
10712]
Length = 284
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 22/168 (13%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P L +++E+RV+L+RD LLR
Sbjct: 125 GAPLRFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALAALSARERRVMLSRDRGLLRR 183
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L + S QL +V+E F ++ +RCT CNG LS +
Sbjct: 184 RELWAGAY--IYSDRPEDQLRDVLERFAPPLAP---WTRCTACNGE-----LSGADKDAV 233
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYH-------NAVQKF 514
+ +R + +D F +C++C ++YW G + +AV++F
Sbjct: 234 RERLERGTEKTYD---VFAECVECGRVYWRGAHHARLEAIVTDAVREF 278
>gi|15643542|ref|NP_228588.1| hypothetical protein TM0779 [Thermotoga maritima MSB8]
gi|148269294|ref|YP_001243754.1| hypothetical protein Tpet_0149 [Thermotoga petrophila RKU-1]
gi|170287953|ref|YP_001738191.1| hypothetical protein TRQ2_0147 [Thermotoga sp. RQ2]
gi|281411590|ref|YP_003345669.1| hypothetical protein Tnap_0150 [Thermotoga naphthophila RKU-10]
gi|418045050|ref|ZP_12683146.1| protein of unknown function DUF82 [Thermotoga maritima MSB8]
gi|4981308|gb|AAD35861.1|AE001747_4 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|147734838|gb|ABQ46178.1| protein of unknown function DUF82 [Thermotoga petrophila RKU-1]
gi|170175456|gb|ACB08508.1| protein of unknown function DUF82 [Thermotoga sp. RQ2]
gi|281372693|gb|ADA66255.1| protein of unknown function DUF82 [Thermotoga naphthophila RKU-10]
gi|351678132|gb|EHA61279.1| protein of unknown function DUF82 [Thermotoga maritima MSB8]
Length = 247
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 344 PPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVL 403
P W ++ G P+F+ D+ + LA+ LR +G +A +L K+K +L
Sbjct: 84 PEDWLVTPRYIGEPRFVLDIHLGKLARLLRMLGFEAVFGEESD---EKLCWMAVKKKAIL 140
Query: 404 LTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQK 463
L+RD LL+ + L+ Y V++ +QL+EV+E + LK + +RC +C +
Sbjct: 141 LSRDTGLLKRKELVFG--YYVRNTDPKEQLVEVVERYDLK-KWMKPFTRCIECGVELEEV 197
Query: 464 PLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
P +EAV+ R+P ++ +F +C C ++YW+G+ Y + V+
Sbjct: 198 P---KEAVK-----NRVPPKVYGFFNEFARCPVCGRIYWKGSHYDHMVE 238
>gi|448613422|ref|ZP_21663302.1| hypothetical protein C440_15974 [Haloferax mucosum ATCC BAA-1512]
gi|445740319|gb|ELZ91825.1| hypothetical protein C440_15974 [Haloferax mucosum ATCC BAA-1512]
Length = 173
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 81/187 (43%), Gaps = 23/187 (12%)
Query: 336 DDIG-DWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGID---AATPRSKKPEPRE 391
DDIG D G + G L DVM+ LA +LR G D A P E
Sbjct: 3 DDIGADHPGTVASGIDQPEPGETTLLLDVMLGTLATNLRMCGYDTVYALDDDGSDPGDEE 62
Query: 392 LIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQL--LEVIEAFQLKISEDQL 449
L+++ +++ RVLLTRD L +Q R L + L +E+ +S D+
Sbjct: 63 LLERAARDGRVLLTRDVAL-------ASQAPRSVLLAARTPIDQLRELESVGFDVSLDET 115
Query: 450 MSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
+RC CNG P+ T +A + + PD W+C DC Q++W G+ + +
Sbjct: 116 PTRCGVCNG-----PVETVDADASVPDYAPRPD-----ETALWRCQDCGQVFWRGSHWRD 165
Query: 510 AVQKFID 516
+ D
Sbjct: 166 VESRVND 172
>gi|448582196|ref|ZP_21645700.1| hypothetical protein C454_03917 [Haloferax gibbonsii ATCC 33959]
gi|445731844|gb|ELZ83427.1| hypothetical protein C454_03917 [Haloferax gibbonsii ATCC 33959]
Length = 187
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 83/199 (41%), Gaps = 39/199 (19%)
Query: 336 DDIG-DWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAA-------------- 380
DD+G D G + G L DVM+ LA +LR G DA
Sbjct: 3 DDVGADHPGTVASGVDRAAPGDTALLLDVMLGKLATYLRMCGYDAEYALDSEDEAGDSEG 62
Query: 381 --TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQL--LEV 436
PR+ P L+ + E+RVLLTRD +L + R L + + + L
Sbjct: 63 NRDPRTD-PGDDSLLARADAERRVLLTRDVRL-------AERASRSVLLAEREPIAQLRE 114
Query: 437 IEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFD-KNLQFWQCM 495
+E+ +S D+ SRC CNGR VEA + +PD D K W+C
Sbjct: 115 LESVGFAVSLDEEPSRCGACNGR-----------VEAVGRDEPVPDYAPDPKETALWRCR 163
Query: 496 DCNQLYWEGTQYHNAVQKF 514
DC Q++W G+ + + +
Sbjct: 164 DCGQVFWRGSHWRDVEARL 182
>gi|390458575|ref|XP_002743563.2| PREDICTED: probable exonuclease mut-7 homolog [Callithrix jacchus]
Length = 846
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D Y+ P+ I+L+TS E H L +VG+D EW PR SLLQ
Sbjct: 380 DHYYQLPIPRENIYLLTSQED-LARHKDALLQPQQVVGVDLEWT-LVFIAGGRPRPSLLQ 437
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGFK 111
+A + VFLLD+ + P + +L+ +L P I KLG+
Sbjct: 438 VATE--------------GCVFLLDILAFTQPPAGQGAQAFSQLVAQLLSDPSITKLGYG 483
Query: 112 FKQDLIYLSSTFCSQGCDIGFDRVEPYL--DITSIYNHLHHKQLGRKLPKETKS-----L 164
DL L + C I VE + + + H + G P ++ L
Sbjct: 484 MAGDLQKLGMS-----CPI-LAHVEKQVLGGVDLLLVHRQMRMAGMPTPGMARAGGLRGL 537
Query: 165 ANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+ + +++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 538 SLLVQQVLGTTLDKTQQLSNWDRRPLFEEQLIYAAADAYCLLEVHQAL 585
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT--RDAKLLRHQY 415
+ +CD M++GLA+ LRC+G+D + + + R + E R++LT + LR Q
Sbjct: 646 RVVCDNMLQGLARSLRCLGVDVHVLDNSE-DHRRAAEVARLEGRIILTSGQPYHTLRAQV 704
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ SL QQ V+ F ++++ + SRC CN
Sbjct: 705 GAGRCLMVDGSLKAQQQAKAVLRHFNVRVTHADIFSRCQACN 746
>gi|363740369|ref|XP_415556.3| PREDICTED: probable exonuclease mut-7 homolog [Gallus gallus]
Length = 999
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 97/212 (45%), Gaps = 48/212 (22%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
+ L +VG+D EW+P PRVSLLQLA + DE VFLLDL
Sbjct: 381 KVLKPGQIVGIDMEWRPSFGMVGK-PRVSLLQLAVR---------DE-----VFLLDLPR 425
Query: 87 I-----------PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS--QGCDIGFD 133
+ LP ++ L+ I KLG+ DL L++T CS +G D
Sbjct: 426 LLEQAEVKGEKEKLP---HFIQRLYSDATITKLGYGMSGDLSSLAAT-CSTLKGMDKQSQ 481
Query: 134 RVEPYLDITSIY--NHLHHKQLGRKL----PKET----------KSLANICKELLDISLS 177
V L I + + K+ G K+ P+++ K L+ + + +L L
Sbjct: 482 SVVDLLTIDKLLQKSSTDWKKGGLKVDVLSPEQSCEDGGLRQPEKGLSLLVQHVLGKPLD 541
Query: 178 KELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
K Q S+W RPL EEQ YAA DA+CL+E++
Sbjct: 542 KTEQMSNWEKRPLREEQILYAASDAYCLLEVY 573
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 360 LCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRD--AKLLRHQYLI 417
+CD M++GL ++LRC+G+D ++ + R+ + +E RV+LT + LR ++
Sbjct: 642 VCDNMLQGLGRYLRCLGVDVRMLENED-DHRKAAEIARQEGRVILTSGLPYQTLR-SHVG 699
Query: 418 KNQIYRVKSLLK-NQQLLEVIEAFQLKISEDQLMSRC 453
+ + + V K +Q L+V++ F + ++ + SRC
Sbjct: 700 EGRCFSVNCSEKAKEQALQVLKHFNVHVTLADIFSRC 736
>gi|242277603|ref|YP_002989732.1| 3'-5' exonuclease [Desulfovibrio salexigens DSM 2638]
gi|242120497|gb|ACS78193.1| 3'-5' exonuclease [Desulfovibrio salexigens DSM 2638]
Length = 198
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 84/188 (44%), Gaps = 41/188 (21%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
LS+ L+G D E +P ++P SL+QLA + VFLL L+ I
Sbjct: 44 LSRCELLGFDTETRPVFRKGVSYPP-SLIQLATE--------------DCVFLLHLNHI- 87
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQG-CDIGFDRVEPYLDITSIY 145
S+ + +KE+ S DI+K G D+ L S F +G D+G
Sbjct: 88 --SLSDHIKEVLSSADIIKTGVAVINDVKELRDVSPFEGKGFVDLG-------------- 131
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
L R L +T L N+ LL +SK +QCS+W + LT +Q YAA DA
Sbjct: 132 ------DLARSLEMQTNGLRNLAANLLGFRISKGVQCSNWGRKELTPQQITYAATDAWVS 185
Query: 206 IEIFNIFQ 213
EI+ FQ
Sbjct: 186 REIYLKFQ 193
>gi|257060870|ref|YP_003138758.1| hypothetical protein Cyan8802_3080 [Cyanothece sp. PCC 8802]
gi|256591036|gb|ACV01923.1| protein of unknown function DUF82 [Cyanothece sp. PCC 8802]
Length = 261
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ DV + LA +R +G D + E E+ + + ++KR LLTRD LL+ +I
Sbjct: 98 RFVLDVHLGKLATQMRLLGFDVLYENNYDDE--EIAEISHQQKRYLLTRDIALLKRSRVI 155
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRF--IQKPLSTEEAVEAAK 475
Y ++ QL+EV+ F L S+ RC +CNG ++K L E+ K
Sbjct: 156 YG--YWIRGKNTEAQLIEVLNRFDL-FSDISPFKRCLRCNGLITSVEKQLIQEQLEPLTK 212
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ +F+QC C Q+YW+G+ Y
Sbjct: 213 ----------EHYHEFYQCTKCAQIYWKGSHY 234
>gi|321455674|gb|EFX66801.1| hypothetical protein DAPPUDRAFT_331718 [Daphnia pulex]
Length = 224
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 54/238 (22%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
+ AL +S++VG+D EW P + ++LQ+A +FLLD+
Sbjct: 7 IGSALGKSTVVGVDIEWPPF----GTLAKATVLQIATH--------------DKIFLLDI 48
Query: 85 SSI------PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
S+ + + +L+ +LF + ILKLG+ K+DL LS + G D+ + +
Sbjct: 49 FSLREDKSCSVINSQQLIGDLFGNRHILKLGYGLKEDLHVLSRSLPGIG-DVS-KSIVNW 106
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKE------------LLDISLSKELQCSDWS 186
+DI ++++++ K LP + + C + LL + L K+ Q SDW
Sbjct: 107 IDIKNLWSNIETK-YPSFLPPAVLNDGDTCSQETHKGLSGLVKLLLGLPLDKKEQFSDWQ 165
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEK 244
RPL Q YAA+DA CL+E+++ Q + S L++ +G+LEK
Sbjct: 166 KRPLRTSQFIYAALDAFCLLEVYDYLQKR---------------SQFLEIDWRGVLEK 208
>gi|345850485|ref|ZP_08803481.1| hypothetical protein SZN_12138 [Streptomyces zinciresistens K42]
gi|345638082|gb|EGX59593.1| hypothetical protein SZN_12138 [Streptomyces zinciresistens K42]
Length = 241
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL DV + LA+ LR +G+D A + +P L ++ E+RV+L+RD LLR + L
Sbjct: 90 RFLLDVHLGTLARRLRLLGVDTAYESTDLGDP-ALASLSAAERRVMLSRDRGLLRRRELW 148
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
V S QL +V+ F+ E + +RCT CNG + + + EE + +G
Sbjct: 149 AGAY--VYSTRPEDQLHDVLGRFR---PELRPWTRCTACNG--LLRAATKEEVADRLEGG 201
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAV 511
R +D F QC C + YW+G + V
Sbjct: 202 TRRS---YDV---FAQCASCGRAYWKGAHHEQLV 229
>gi|220918448|ref|YP_002493752.1| hypothetical protein A2cp1_3352 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219956302|gb|ACL66686.1| protein of unknown function DUF82 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 252
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + LA+HLR +G DA E EL ++ E RVLLTRD LL+ + +
Sbjct: 97 RFVLDGHLGRLARHLRMLGFDARWWPDAGDE--ELAAVSAGEGRVLLTRDQGLLKRRVVT 154
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y V++ +QL EV+ L + RC +CN +P++ E +
Sbjct: 155 HG--YWVRATDPRRQLTEVVRRLDLARAVAPF-RRCLRCNAPL--EPVAPEAVAD----- 204
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
R+P + ++ F +C C ++YW G+ + Q
Sbjct: 205 -RVPPAVRARHRAFRRCPPCGRVYWAGSHHRRMAQ 238
>gi|334312267|ref|XP_001374708.2| PREDICTED: probable exonuclease mut-7 homolog [Monodelphis
domestica]
Length = 1091
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 89/213 (41%), Gaps = 49/213 (23%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +VG+D EW+P PRVS+LQ+A + V+LLDL
Sbjct: 411 LQPGQVVGIDMEWRPSFGLVGR-PRVSVLQIATK--------------EHVYLLDLLQFS 455
Query: 89 LPS-----------IWELLKELFVSPDILKLGFKFKQDLIYLSSTFC--------SQGCD 129
IW L E P I KLG+ DL LS+T+ +QG
Sbjct: 456 KLDKEEKEKELCHFIWSLFSE----PSITKLGYGMSGDLCSLSTTYPALREMEKQAQGI- 510
Query: 130 IGFDRVEPYLDITSIYNHLHHKQL----------GRKLPKETKSLANICKELLDISLSKE 179
+ +V+ L S HH + ++ K L+ + + LL L K
Sbjct: 511 LDLLQVDKQLQKNSGLWKKHHIPVDSLCQEPSSKTKRTRHAEKGLSLLVQNLLGKPLDKR 570
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
Q S+W RPL EEQ YAA DA+CL+E++ +
Sbjct: 571 EQLSNWEKRPLREEQILYAASDAYCLLEVYEVL 603
>gi|116747523|ref|YP_844210.1| hypothetical protein Sfum_0072 [Syntrophobacter fumaroxidans MPOB]
gi|116696587|gb|ABK15775.1| protein of unknown function DUF82 [Syntrophobacter fumaroxidans
MPOB]
Length = 158
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D+M+ +AK LR +G DA R + + + + +E R+++TR R Q+
Sbjct: 10 RFVVDIMLGKVAKWLRILGFDA---RCLRVDSSAQVTRFREEGRIIVTR-----RRQWCG 61
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
++ + S ++QL E+I A +++ E + + RC CN E + + F
Sbjct: 62 STGVFCLTSNDPSEQLKELIAAVPIRLEELRPLRRCILCNLDL--------EVLPRDRVF 113
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQK 513
R+PD +F+ N F C C ++YW GT V++
Sbjct: 114 GRVPDFVFETNECFHHCPGCGRIYWPGTHLVRMVER 149
>gi|206889899|ref|YP_002249154.1| hypothetical protein THEYE_A1345 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741837|gb|ACI20894.1| conserved Archaeal protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 158
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DVM+ L++ LR G D T RELI + +E R++LTRD L + L
Sbjct: 5 PRFVADVMLGSLSRWLRLFGFD--TLYRNDFTDRELIKISLQEDRIVLTRDNALAMSRLL 62
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
++ ++S +Q+ EV+ + L RC CNG E++ K
Sbjct: 63 --KKVLLIQSETIKEQIKEVLSTIPISFDLLSLRPRCPVCNGE--------TESIMKEKL 112
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
IPD + N +F C C ++YW GT
Sbjct: 113 KGEIPDYVAFSNQEFMICKACGKIYWHGTH 142
>gi|448424650|ref|ZP_21582506.1| hypothetical protein C473_05817 [Halorubrum terrestre JCM 10247]
gi|445681860|gb|ELZ34285.1| hypothetical protein C473_05817 [Halorubrum terrestre JCM 10247]
Length = 184
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQY 415
P+ L DVM LA +LR G DAA + E + L+ + E+RVLLTRD +L
Sbjct: 21 PRILLDVMCGKLATYLRLCGYDAAYALDRGVEADDRLLSLAAAERRVLLTRDRELAERAS 80
Query: 416 LIKNQIYRVKSLLKNQQ----LLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAV 471
+ R ++L ++ L ++A L + +RC CNG P+ A
Sbjct: 81 ATADADPRPAAVLLTERDVIDQLRELDAAGLPVELVDEPTRCGSCNG-----PVERVGAP 135
Query: 472 EAAKGFQRIPDCLFD---KNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
EA PD + D + W+C +C Q +W+G + + + D+
Sbjct: 136 EANAAPTDRPDYVPDDVGSDRPGWRCTECGQWFWKGGHWDDVAARLDDL 184
>gi|12321757|gb|AAG50917.1|AC069159_18 3'-5' exonuclease, putative [Arabidopsis thaliana]
Length = 582
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 46/193 (23%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
+VG+D EWKP S +VS++Q+ SD + +F+LDL + +
Sbjct: 380 VVGIDCEWKPNYIKGSKQNKVSIMQIG----------SD----TKIFILDLIKLYNDASE 425
Query: 94 EL---LKELFVSPDILKL--------------GFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
L L + S LKL G+ F+ D+ L+ ++ C F+R +
Sbjct: 426 ILDNCLSHILQSKSTLKLVSLTEDYPDHKLSSGYNFQCDIKQLALSYGDLKC---FERYD 482
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
LDI +++N + LA + K++L +SL+K + SDW RPL++ Q
Sbjct: 483 MLLDIQNVFN------------EPFGGLAGLTKKILGVSLNKTRRNSDWEQRPLSQNQLE 530
Query: 197 YAAIDAHCLIEIF 209
YAA+DA LI IF
Sbjct: 531 YAALDAAVLIHIF 543
>gi|411006797|ref|ZP_11383126.1| hypothetical protein SgloC_28695 [Streptomyces globisporus C-1027]
Length = 244
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL DV + LA+ LR +G+DAA +P L +++E+RVLL+RD LLR + +
Sbjct: 90 RFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALATLSARERRVLLSRDRGLLRRREIW 148
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA--AK 475
V S +QL +V+ F + SRCT CNG + + +++V
Sbjct: 149 AGAY--VYSDRPKEQLRDVLGRFAPALDP---WSRCTACNGILVG---AAKDSVSGLLEH 200
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
G Q D F QC +C+++YW G +H ++ +
Sbjct: 201 GTQEAYDV-------FAQCTECSRVYWRGA-HHGHLETIV 232
>gi|359145693|ref|ZP_09179392.1| hypothetical protein StrS4_07989 [Streptomyces sp. S4]
gi|421744677|ref|ZP_16182636.1| hypothetical protein SM8_06348 [Streptomyces sp. SM8]
gi|406686907|gb|EKC90969.1| hypothetical protein SM8_06348 [Streptomyces sp. SM8]
Length = 246
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 16/163 (9%)
Query: 354 DGYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLR 412
+G P +FL DV + LA+ +R +GID A +P L +++ E+RVLL+RD LLR
Sbjct: 85 EGAPLRFLLDVHLGTLARRMRLLGIDTAYESHDLGDP-ALAARSAAEQRVLLSRDRGLLR 143
Query: 413 HQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
+ L V S ++QL +V+ F ++ +RCT CNGR L + E
Sbjct: 144 RRELWAGGY--VYSDKPDEQLRDVLGRFAPALTP---WTRCTACNGR-----LRDADKDE 193
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
A+ + +D F +C C ++YW G +H+ ++ +
Sbjct: 194 VARDLEGGTKATYD---VFARCDACGRVYWRGA-HHDRLETIV 232
>gi|408828292|ref|ZP_11213182.1| hypothetical protein SsomD4_13983 [Streptomyces somaliensis DSM
40738]
Length = 244
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA S+ L Q+++E+RV+L+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAY-ESEDIGDAALAAQSARERRVMLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S ++QL +V+E F ++ +RCT CNG L+ + E
Sbjct: 145 RELWAGAY--VYSHRPDEQLRDVLERFAPRLVP---WTRCTACNG-----VLTGADKDEV 194
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ + +D F +C C+++YW G +
Sbjct: 195 RERLEHGTRHTYD---VFARCTACDRVYWRGAHH 225
>gi|195401270|ref|XP_002059237.1| GJ16284 [Drosophila virilis]
gi|194156111|gb|EDW71295.1| GJ16284 [Drosophila virilis]
Length = 621
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ + F + + L + ++ +D+EW Q+ ++ LLQ+A
Sbjct: 405 LLIVDTAATFERMLQHLQREQIIYMDSEWMQNVCAQN---QLCLLQIATT---------- 451
Query: 73 ESNASVVFLLDLSSIPLPSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIG 131
N ++ L W L +F +P+ILK+GF DL L + Q +
Sbjct: 452 -HNVYLIDCLASRQALHEEHWRALGANVFNNPNILKVGFSMLNDLSVLQRSLPLQ---LR 507
Query: 132 FDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSDWS 186
YLD+ +++ L K+ G +LP + +L ++ L L+K QCS+W+
Sbjct: 508 LHMPHHYLDLRNVWLELK-KRHGVELPYGNVNRAGDALTDLSMLCLGKKLNKANQCSNWA 566
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
NRPL EQ YAAIDA CL+ I++ VA
Sbjct: 567 NRPLRREQILYAAIDARCLLLIYDCLMSCVA 597
>gi|198438094|ref|XP_002131917.1| PREDICTED: similar to MUTator family member (mut-7) [Ciona
intestinalis]
Length = 921
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 40/208 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL---- 84
L+ +S VG+D+EW SN V++LQLA Q S V+LLD+
Sbjct: 379 LNNNSCVGIDSEWA---FSTSNTDGVAILQLAVQ--------------SNVYLLDVFNFT 421
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+ + ++ L +L S + LKLG+ +D+ L+ C I + + +
Sbjct: 422 NQMNTCTLGLFLAKLIKSKNHLKLGYGLNEDMQKLA-------CSIPLLKEALQASVRVL 474
Query: 145 YNHLHHKQLGRKLPK------------ETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
H+ K R PK + L+ + + L +L K Q SDW RPL
Sbjct: 475 DFHIVLKHACRLYPKLLAMENDADELCKHSGLSKLALQTLGQALDKSEQISDWERRPLRV 534
Query: 193 EQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
Q YAA+DA CL+EI+++ +++ + G
Sbjct: 535 TQVTYAALDAFCLLEIYDVLSIRLQELG 562
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 292 SLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSL 351
+L KI+ + K+ R K P T + G+ + V + ++K PP +
Sbjct: 566 TLEKIINQPVPKVKRRGRGKGPATDMQAGQNSNEVSILPQDK-----------PPVNEVS 614
Query: 352 GGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDA--K 409
D K +CD M++GLA+ LRC GIDA S + +E R++LT + +
Sbjct: 615 ARDF--KVVCDNMLQGLARQLRCCGIDAKM-LSNFEDHDVCAKIAQQENRIILTSGSPFR 671
Query: 410 LLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEE 469
L Q + + L +Q+ V+E F + +++ + SRC CN K LS+ E
Sbjct: 672 FLSSQVAVGHCFNVPNGLKAKEQVAVVLEKFNVNVTQLDVFSRCQICNCDQYLK-LSSGE 730
Query: 470 AVEAAK 475
+EA +
Sbjct: 731 MLEAIR 736
>gi|448561172|ref|ZP_21634524.1| hypothetical protein C457_03896 [Haloferax prahovense DSM 18310]
gi|445721404|gb|ELZ73072.1| hypothetical protein C457_03896 [Haloferax prahovense DSM 18310]
Length = 187
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 83/199 (41%), Gaps = 39/199 (19%)
Query: 336 DDIG-DWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAA-------------- 380
DDIG D G + G L DVM+ LA +LR G DA
Sbjct: 3 DDIGSDHPGTVASGVDRAAPGDTALLLDVMLGKLATYLRMCGYDAEYALDSEDEAGDSEG 62
Query: 381 --TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQL--LEV 436
PR+ P L+ + E+RVLLTRD +L + R L + + + L
Sbjct: 63 NRDPRTD-PGDDSLLARADAERRVLLTRDVRL-------AERASRSVLLAEREPIAQLRE 114
Query: 437 IEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFD-KNLQFWQCM 495
+E+ +S D+ SRC CNGR VEA + +PD D K W+C
Sbjct: 115 LESVGFAVSLDEEPSRCGACNGR-----------VEAVGRDEPVPDYAPDPKETALWRCR 163
Query: 496 DCNQLYWEGTQYHNAVQKF 514
DC Q++W G+ + + +
Sbjct: 164 DCGQVFWCGSHWRDVEARL 182
>gi|333026827|ref|ZP_08454891.1| hypothetical protein STTU_4331 [Streptomyces sp. Tu6071]
gi|332746679|gb|EGJ77120.1| hypothetical protein STTU_4331 [Streptomyces sp. Tu6071]
Length = 249
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL DV + LA+ LR +G+D A R +P L +++ E RVLL+RD LL + L
Sbjct: 90 RFLLDVHLGTLARRLRLLGVDTAYQREDPGDP-ALAARSAAEHRVLLSRDRGLLHRRELW 148
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
V S +QL +V++ F+ ++ +RCT CN PL + A
Sbjct: 149 AGAY--VYSHRPEEQLPDVLDRFRPRLHP---WTRCTACN-----APLRPATPADVA--- 195
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
RI D + +C C ++YW G +H+ + + +
Sbjct: 196 DRIAAGTRDTYDVYAECPACERVYWRGA-HHDGLARIV 232
>gi|326778630|ref|ZP_08237895.1| protein of unknown function DUF82 [Streptomyces griseus XylebKG-1]
gi|326658963|gb|EGE43809.1| protein of unknown function DUF82 [Streptomyces griseus XylebKG-1]
Length = 244
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL DV + LA+ LR +G+DAA +P L +++E+RVLL+RD LLR + +
Sbjct: 90 RFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALAALSARERRVLLSRDRGLLRRREIW 148
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLST-EEAVEAAKG 476
V S +QL +V+ F ++ +RCT CNG T E +E G
Sbjct: 149 AGAY--VYSDRPAEQLRDVLGRFTPALAP---WTRCTACNGMLAGASKDTVSELLE--HG 201
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
Q D F QC +C+++YW G +H ++ +
Sbjct: 202 TQEAYDV-------FAQCTECSRVYWRGA-HHGHLETIV 232
>gi|182437980|ref|YP_001825699.1| hypothetical protein SGR_4187 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178466496|dbj|BAG21016.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 244
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL DV + LA+ LR +G+DAA +P L +++E+RVLL+RD LLR + +
Sbjct: 90 RFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALAALSARERRVLLSRDRGLLRRREIW 148
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLST-EEAVEAAKG 476
V S +QL +V+ F ++ +RCT CNG T E +E G
Sbjct: 149 AGAY--VYSDRPAEQLRDVLGRFTPALAP---WTRCTACNGMLAGASKDTVSELLE--HG 201
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
Q D F QC +C+++YW G +H ++ +
Sbjct: 202 TQEAYDV-------FAQCTECSRVYWRGA-HHGHLETIV 232
>gi|448450366|ref|ZP_21592265.1| hypothetical protein C470_05966 [Halorubrum litoreum JCM 13561]
gi|445812218|gb|EMA62214.1| hypothetical protein C470_05966 [Halorubrum litoreum JCM 13561]
Length = 184
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQY 415
P+ L DVM LA +LR G DAA + E + ++ + E+RVLLTRD L
Sbjct: 21 PRVLLDVMCGKLATYLRLCGYDAAYALDRGVEADDRVLSLAAAERRVLLTRDRDLAERAS 80
Query: 416 LIKNQIYRVKSLLKNQQ----LLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAV 471
+ R ++L ++ L ++A L + +RC CNG P+ A
Sbjct: 81 TTADADPRPAAVLLTERDVIDQLRELDAAGLPVELADEPTRCGSCNG-----PVERVGAP 135
Query: 472 EAAKGFQRIPDCLFD---KNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
EA PD + D + W+C +C Q +W+G + + + D+
Sbjct: 136 EANAAPTDPPDYVPDDVGSDRPGWRCTECGQWFWKGGHWDDVAARLDDL 184
>gi|388456491|ref|ZP_10138786.1| hypothetical protein FdumT_07942 [Fluoribacter dumoffii Tex-KL]
Length = 277
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA++LR +G D + E ++I + KE R++LTRD +L+++ +
Sbjct: 127 PRFILDVHLGKLARYLRLLGFDVIYENNLTDE--KIIQLSIKEHRIVLTRDVGILKNKNI 184
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ + +Q+ EV+ FQLK + +RC CNG + VE +
Sbjct: 185 THG--HWMHHTDPEEQIREVVRQFQLK-KQCHPFTRCLSCNGLL--------KKVEKGEI 233
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ IP F QC C +++WEG+ +
Sbjct: 234 IKDIPTLAQKYYDTFMQCQSCKKVFWEGSHF 264
>gi|195475951|ref|XP_002090246.1| GE12998 [Drosophila yakuba]
gi|194176347|gb|EDW89958.1| GE12998 [Drosophila yakuba]
Length = 625
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ +F + L Q ++ LD+EW + ++ +LQ+A
Sbjct: 410 LIIVDKAEQFDRMLYHLQQECVIYLDSEWMQSVCGDN---QLCVLQIA------------ 454
Query: 73 ESNASVVFLLD-LSSIPL-PSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L W LL +F + +I K+GF DL L S
Sbjct: 455 --TGHNVYLIDCLARESLCEEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQR---SLPLH 509
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 510 LRLQMPHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 569
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAA+DA CL+ I+N +V+
Sbjct: 570 WANRPLRREQILYAAMDARCLLLIYNTLIARVS 602
>gi|291224294|ref|XP_002732140.1| PREDICTED: Probable exonuclease mut-7 homolog [Saccoglossus
kowalevskii]
Length = 1166
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 38/209 (18%)
Query: 32 SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
+++G+D+EW+P +VSLLQLA + VF+LD+ ++
Sbjct: 466 GAIIGIDSEWRPAFGPICEPVKVSLLQLA--------------SIDAVFILDMMTLSQCV 511
Query: 92 IWELLKE----LFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
++LK+ LF + DILKLG+ D+ L ++ R+ +D++ + +
Sbjct: 512 DVDILKDFMLKLFTTHDILKLGYGIDGDIKMLFKSYPLMRNAADLQRI---VDLSVLTRN 568
Query: 148 LHHKQLGRKLPKETKS----------------LANICKELLDISLSKELQCSDWSNRPLT 191
+ K+ L + + L+ + + L L+K + SDW RPL
Sbjct: 569 IQ-KESPELLQNSSTTEDASGEGSGKKGKEKGLSELVQRCLGKPLNKMERLSDWERRPLR 627
Query: 192 EEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ Q YAA+DA+CL+E+++ + KV + G
Sbjct: 628 QAQLIYAALDAYCLLEVYDHIRNKVKESG 656
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDA--KLLRHQYL 416
+CD M++GL + LRC G+D + + E + + +E RV+LT + LR Q +
Sbjct: 721 VVCDTMLQGLGRQLRCCGVDVRILDNTE-EHDKAAEIARREGRVILTSGMPYQTLRSQ-V 778
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG-RFIQKPLSTEEAVEAAK 475
+ + V + Q+ EV+ F + ++ + SRC CNG ++I P+ T + A K
Sbjct: 779 GEGMCFCVSNRKAKHQVKEVLRHFNVYVAARDIFSRCQVCNGNQYITIPVDTMKQAIAQK 838
>gi|162455013|ref|YP_001617380.1| hypothetical protein sce6731 [Sorangium cellulosum So ce56]
gi|161165595|emb|CAN96900.1| hypothetical protein sce6731 [Sorangium cellulosum So ce56]
Length = 216
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P FLCD M+ GL++ LR G DA + +L+ + RVLL+ DA + + L
Sbjct: 46 PSFLCDAMLGGLSRWLRGAGYDAMFEHGI--DDGDLVRLAQQTGRVLLSSDAGVFERRSL 103
Query: 417 IKNQI---YRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ Y + L +Q V+ L + + RC C G P +++V
Sbjct: 104 RTAAVRGLYVPRGLRPTEQAGFVLRELGLPVRD----PRCMACGGALTAAP---KDSVRD 156
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
A +P + D++ +FW+C C ++ W+G+ +
Sbjct: 157 A-----VPAVVADRHDEFWRCDRCGKVLWKGSHWDG 187
>gi|397690274|ref|YP_006527528.1| hypothetical protein MROS_1278 [Melioribacter roseus P3M]
gi|395811766|gb|AFN74515.1| hypothetical protein MROS_1278 [Melioribacter roseus P3M]
Length = 248
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ D + LA++LR G D+ E E+ID + EKR +LTRD +L++ +
Sbjct: 96 PRFILDAHLGRLARYLRMCGFDSLYRNDFSDE--EIIDVSVDEKRCILTRDVGILKNNKV 153
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
++ Y +++ +QL EV+ F L + + S C +CN + I+ + ++ +E
Sbjct: 154 VRG--YWIRNQAPVKQLEEVVARFDL-VDSMKPFSLCIECNVKLIK---TEKDKIEYL-- 205
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+P + + +F +C +C +++W+GT Y
Sbjct: 206 ---LPPKVKKMDTEFCRCPNCKKIFWKGTHY 233
>gi|239988591|ref|ZP_04709255.1| hypothetical protein SrosN1_14879 [Streptomyces roseosporus NRRL
11379]
gi|291445575|ref|ZP_06584965.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291348522|gb|EFE75426.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 244
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL DV + LA+ LR +G+DAA +P L +++E+RVLL+RD LLR + +
Sbjct: 90 RFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALAALSARERRVLLSRDRGLLRRREIW 148
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA--AK 475
V S +QL +V+ F + SRCT CNG + +++V
Sbjct: 149 AGAY--VYSDRPKEQLRDVLGRFAPALDP---WSRCTACNGTLAG---AAKDSVSGLLEH 200
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
G Q D F QC +C+++YW G +H ++ +
Sbjct: 201 GTQEAYDV-------FAQCTECSRVYWRGA-HHGHLETIV 232
>gi|433436681|ref|ZP_20408231.1| hypothetical protein D320_19837 [Haloferax sp. BAB2207]
gi|448572784|ref|ZP_21640545.1| hypothetical protein C456_14588 [Haloferax lucentense DSM 14919]
gi|448597006|ref|ZP_21654144.1| hypothetical protein C452_07228 [Haloferax alexandrinus JCM 10717]
gi|432191285|gb|ELK48252.1| hypothetical protein D320_19837 [Haloferax sp. BAB2207]
gi|445719556|gb|ELZ71235.1| hypothetical protein C456_14588 [Haloferax lucentense DSM 14919]
gi|445740887|gb|ELZ92392.1| hypothetical protein C452_07228 [Haloferax alexandrinus JCM 10717]
Length = 188
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAA-----------------TPRSKKPEPRELIDQTS 397
G L DVM+ LA +LR G DA PR+ P L+ +
Sbjct: 23 GDTALLLDVMLGKLATYLRMCGYDAEYALDGGDETEDGADGARDPRTD-PGDDNLLARAD 81
Query: 398 KEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
E RVLLTRD +L + +N + + L QL E +EA +S D+ SRC CN
Sbjct: 82 AEGRVLLTRDVRLA--ERAPRNVLLAEREPLA--QLRE-LEAVGFAVSLDEEPSRCGVCN 136
Query: 458 GRFIQKPLSTEEAVEAAKGFQRIPDCLFDKN-LQFWQCMDCNQLYWEGTQYHNAVQKF 514
GR VEA + +PD D W+C DC Q++W G+ + + +
Sbjct: 137 GR-----------VEAVGRDEPVPDYAPDPGETALWRCRDCGQVFWRGSHWRDVETRL 183
>gi|291451581|ref|ZP_06590971.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291354530|gb|EFE81432.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 246
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 16/163 (9%)
Query: 354 DGYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLR 412
+G P +FL DV + LA+ +R +GID A +P L +++ E+RVLL+RD LLR
Sbjct: 85 EGAPLRFLLDVHLGTLARRMRLLGIDTAYESHDLGDP-ALAARSAAEQRVLLSRDRGLLR 143
Query: 413 HQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
+ L V S ++QL +V+ F ++ +RCT CNGR L + E
Sbjct: 144 RRELWAGGY--VYSDKPDEQLRDVLGRFAPVLTP---WTRCTACNGR-----LRDADKDE 193
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
A+ + +D F +C C ++YW G +H+ ++ +
Sbjct: 194 VARDLEGGTKATYD---VFARCDACGRVYWRGA-HHDRLETIV 232
>gi|108805413|ref|YP_645350.1| hypothetical protein Rxyl_2621 [Rubrobacter xylanophilus DSM 9941]
gi|108766656|gb|ABG05538.1| protein of unknown function DUF82 [Rubrobacter xylanophilus DSM
9941]
Length = 152
Score = 66.2 bits (160), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPR-ELIDQTSKEKRVLLTRDAKLLRHQYL 416
+FLCD M+ GLAK LR G DA+ R EP E++ + +E RV+LT D+ + +
Sbjct: 2 RFLCDAMLGGLAKWLRAAGHDASCARG---EPDGEIVRRAIEEGRVILTCDSGFMERAPV 58
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQL---KISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
RV LL Q+ L V E +L + +L SRC +CNG + P E A E
Sbjct: 59 RDG---RVGVLLLPQE-LSVEEQLRLVAGRFGLRRLPSRCMECNGELAETP-PEEVAGE- 112
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+P + + F++C C +++W G+ +
Sbjct: 113 ------VPAGVAGRQRLFFRCRGCGRVFWYGSHW 140
>gi|357419224|ref|YP_004932216.1| hypothetical protein Tlie_0384 [Thermovirga lienii DSM 17291]
gi|355396690|gb|AER66119.1| protein of unknown function DUF82 [Thermovirga lienii DSM 17291]
Length = 248
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 85/156 (54%), Gaps = 13/156 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F+ DV V LAK LR +G D S + +EL + SK ++LLT+D +LL + +
Sbjct: 99 FVADVNVGRLAKLLRLLGFDTLYDPSW--QDKELANLASKYNKILLTKDRELLMRKSINW 156
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
++ ++S+ QL EVI + L + +L +RCT CN + +P+S EE ++ +
Sbjct: 157 GKL--IRSISPWDQLAEVILFYGLS-DQIKLFTRCTNCNQ--VLEPVSKEEVLDRLEPLT 211
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
R+ +++ QF QC C +++W G+ + + +K
Sbjct: 212 RL---MYN---QFTQCPACGKVFWRGSHHKHIEEKL 241
>gi|297202045|ref|ZP_06919442.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|297148023|gb|EDY58353.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 249
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 16/162 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+D A + +P L +++ EKRV+L+RD LL
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDTAYESTDIGDP-ALATRSATEKRVMLSRDRGLLHR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S QL ++++ F+ ++ + +RCT CNG +++ + A
Sbjct: 145 RELWAGAF--VYSTRPEDQLRDILDRFRPEL---RPWTRCTACNG-LLREATKEQVADRL 198
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
G +R D F QC +C + YW+G +H +++ +
Sbjct: 199 EHGTERSYDV-------FAQCDECGRPYWKGA-HHEQLEQIV 232
>gi|365867765|ref|ZP_09407332.1| hypothetical protein SPW_7636 [Streptomyces sp. W007]
gi|364002713|gb|EHM23886.1| hypothetical protein SPW_7636 [Streptomyces sp. W007]
Length = 244
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL DV + LA+ LR +G+DAA +P L +++E+RVLL+RD LLR + +
Sbjct: 90 RFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALATLSAQERRVLLSRDRGLLRRREIW 148
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA--AK 475
V S +QL +V+ F ++ +RCT CNG + +++V
Sbjct: 149 AGAY--VYSDRPKEQLRDVLGRFAPALAP---WTRCTACNGTLAG---AAKDSVSGLLEH 200
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
G Q D F QC +C+++YW G +H ++ +
Sbjct: 201 GTQEAYDV-------FAQCTECSRVYWRGA-HHGHLETIV 232
>gi|357403075|ref|YP_004915000.1| hypothetical protein SCAT_5509 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386359157|ref|YP_006057403.1| hypothetical protein SCATT_55100 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337769484|emb|CCB78197.1| conserved protein of unknown function [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|365809665|gb|AEW97881.1| protein of unknown function DUF82 [Streptomyces cattleya NRRL 8057
= DSM 46488]
Length = 279
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL DV + LA+ LR VG+D A + + L+ Q + E+RVLLT+D LLR + L
Sbjct: 99 RFLLDVHLGALARRLRLVGVDTAYHNDRADD--ALVAQANAERRVLLTQDRGLLRRRALW 156
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK-G 476
V+ ++QL +V+ F ++ +RCT CNG P++ E + G
Sbjct: 157 CGAY--VRGARADEQLTDVLTRFAPPLAP---WTRCTACNGEL--APVAKAEVDHLLRPG 209
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+R F +C C ++YW G +
Sbjct: 210 TRRTYQA-------FTRCRRCGRVYWPGAHH 233
>gi|344943364|ref|ZP_08782651.1| protein of unknown function DUF82 [Methylobacter tundripaludum
SV96]
gi|344260651|gb|EGW20923.1| protein of unknown function DUF82 [Methylobacter tundripaludum
SV96]
Length = 259
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 21/165 (12%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV V LAK +R +G D+ + +++ E+R++LTRD +LL + +
Sbjct: 99 PRFILDVNVGKLAKRMRLLGFDSLYRNDYRDA--DIVKSAVNERRIVLTRDRRLLYIKQI 156
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ Y V+++ Q+ EV+ F L S + RC CNG + P++ +
Sbjct: 157 --DHGYWVRAVDVEVQVDEVLRRFDLYDSIHPFV-RCLICNG--VLTPVAKAD------- 204
Query: 477 FQRIPDCLFDKNL----QFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
I DCL K F+QC DC ++YW+G+ N +Q+ D+
Sbjct: 205 ---IWDCLEAKTRLYYEDFYQCADCQRIYWQGSHMKNMLQRLTDL 246
>gi|456389194|gb|EMF54634.1| hypothetical protein SBD_4302 [Streptomyces bottropensis ATCC
25435]
Length = 241
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 17/155 (10%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+D A + +P L +++ E+RVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDTAYESTDIGDP-ALATRSAAEQRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L + S QL +V+ F + +RCT CNG + KP + E+ +
Sbjct: 145 RELWAGAY--IYSTHPEDQLQDVLARFAPDLHP---WTRCTACNG--LLKPATKEQVADR 197
Query: 474 AK-GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ G Q+ D F QC C + YW+G +
Sbjct: 198 LEGGTQKSYDV-------FAQCDACGRAYWKGAHH 225
>gi|433645657|ref|YP_007290659.1| hypothetical protein Mycsm_00820 [Mycobacterium smegmatis JS623]
gi|433295434|gb|AGB21254.1| hypothetical protein Mycsm_00820 [Mycobacterium smegmatis JS623]
Length = 248
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +G D S + + L D + ++R+LLTRD LL+ + +
Sbjct: 97 PRFVIDVNLGRLARLLRVLGFDVWW--SSDADDQTLADVSLGQQRILLTRDRGLLKRRAI 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V+S +Q LEVI L +RC +CNGR ++ +E ++ +
Sbjct: 155 THGLF--VRSDQPKEQTLEVIRRLDLA-QRLAPFTRCVRCNGRL--AAVTKDEVIDHLEP 209
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
R+ +D F +C DC ++YW G+
Sbjct: 210 LTRL---YYD---DFSRCTDCRRIYWRGSH 233
>gi|14521513|ref|NP_126989.1| hypothetical protein PAB1509 [Pyrococcus abyssi GE5]
gi|5458732|emb|CAB50219.1| Hypothetical protein PAB1509 [Pyrococcus abyssi GE5]
gi|380742121|tpe|CCE70755.1| TPA: hypothetical protein PAB1509 [Pyrococcus abyssi GE5]
Length = 155
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 86/159 (54%), Gaps = 19/159 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLL-RHQYL 416
KF+ D+M+ LA+ LR G D + + E+I+ KE R++L+RD +L+ R + L
Sbjct: 2 KFIADMMLGRLARWLRLYGYDT---KYGIKDDDEIIETAKKEGRIILSRDLELVERAKKL 58
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM---SRCTKCNGRFIQKPLSTEEAVEA 473
I+ + ++ Q + + +L I ++L +RC KCNG ++ +S EE
Sbjct: 59 GIKAIFIESNSIEGQ----IAQLMRLGIEFNELFPEGARCPKCNGIIVR--VSKEEV--- 109
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
KG ++P+ +++ +F+ C +C Q+YW G Q+ V+
Sbjct: 110 -KG--KVPEKVYESYDEFYVCTNCGQIYWPGRQWEEMVK 145
>gi|448507724|ref|ZP_21615112.1| hypothetical protein C465_06176 [Halorubrum distributum JCM 9100]
gi|448521474|ref|ZP_21618226.1| hypothetical protein C466_06067 [Halorubrum distributum JCM 10118]
gi|445698060|gb|ELZ50112.1| hypothetical protein C465_06176 [Halorubrum distributum JCM 9100]
gi|445702516|gb|ELZ54463.1| hypothetical protein C466_06067 [Halorubrum distributum JCM 10118]
Length = 181
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQY 415
P+ L DVM LA +LR G DAA + E + L+ + E+RVLLTRD +L
Sbjct: 21 PRILLDVMCGKLATYLRLCGYDAAYALDRGVEADDRLLSLAAAERRVLLTRDRELADRAP 80
Query: 416 LIKNQIYRVKSLLKNQQL---LEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
+ V LL + + L ++A L + +RC CNG P+ A E
Sbjct: 81 SADPPVDAV--LLTERDVIDQLRELDAAGLPVELADEPTRCGSCNG-----PVERVGAPE 133
Query: 473 AAKGFQRIPDCLFD---KNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
A PD + D + W+C +C Q +W+G + + + D+
Sbjct: 134 ANAALTDRPDYVPDDVGSDRPGWRCTECGQWFWKGGHWDDVAARLDDL 181
>gi|403301404|ref|XP_003941380.1| PREDICTED: probable exonuclease mut-7 homolog [Saimiri boliviensis
boliviensis]
Length = 874
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D Y+ P+ ++L+ S E H L +V +D EW P PR SLLQ
Sbjct: 361 DRHYQLPIPRENVYLLASRED-LARHEGALLQPQQVVAVDLEWTPVFV-AGGRPRPSLLQ 418
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGFK 111
+A + VFLLD+ ++ P + +L+ +L P I KLG+
Sbjct: 419 VAME--------------GHVFLLDIQALTQPPAGQGARAFSQLVTQLLSDPSITKLGYG 464
Query: 112 FKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANIC 168
DL L T C + +V +D+ ++ + + G + L+ +
Sbjct: 465 MAGDLQKLG-TSCPALAHV-EKQVLGGVDLLLVHRQMRVAGMPTPGVDGAGGLRGLSLLV 522
Query: 169 KELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EE+ YAA DA+CL+E+
Sbjct: 523 QQVLGTTLDKTQQLSNWDRRPLCEEKLIYAAADAYCLLEVHQAL 566
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT--RDAKLLRHQY 415
+ +CD M++GLA+ LRC+G+DA RS + + R + E R++LT + LR Q
Sbjct: 629 RVVCDNMLQGLARSLRCLGVDAQVLRSSE-DHRRAAEIARLEGRIILTSGQPYHTLRAQV 687
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG-RFIQKPLSTEEAVEAA 474
+ SL QQ V+ F ++++ + SRC CNG ++++ + +
Sbjct: 688 GAGRCLLVDGSLKAQQQAKAVLRHFNVRVTHADIFSRCQACNGDQYLKVSTDMMKQLMRL 747
Query: 475 KGFQRIPDCLFDKNLQ 490
G Q P DK Q
Sbjct: 748 SGHQEGPRTSGDKATQ 763
>gi|428310668|ref|YP_007121645.1| hypothetical protein Mic7113_2437 [Microcoleus sp. PCC 7113]
gi|428252280|gb|AFZ18239.1| hypothetical protein Mic7113_2437 [Microcoleus sp. PCC 7113]
Length = 250
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F+ DV + LA LR +G D E EL + ++ ++RVL TRD LL +
Sbjct: 98 FVLDVHLGKLASSLRLLGFDTLYRNDYDDE--ELAEISASQQRVLFTRDKGLLMRSRVTY 155
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
Y V++ QQ++EV+ F L + RC +CNG + +P+S E +
Sbjct: 156 G--YYVRATNPEQQIIEVLRRFDL-FGKILPFQRCIRCNG--LLEPVSKESILNQLPHQT 210
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
R+ + +F +C +C+Q+YW G+ Y +Q+FI+
Sbjct: 211 RL------EIDEFHRCGECSQIYWRGSHYER-MQQFIE 241
>gi|428170043|gb|EKX38971.1| hypothetical protein GUITHDRAFT_143786 [Guillardia theta CCMP2712]
Length = 694
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 41/190 (21%)
Query: 35 VGLDAEWKP-QRSHQSNFPRVSLLQLA-----CQPGPRFNPESDESNASVVFLLDLSSIP 88
+G+DAEWKP +R+++ N RVSL+QL+ C+ G P+ +F
Sbjct: 513 IGIDAEWKPIRRTNERN--RVSLMQLSTTTNECRRGSWKKPKGQ------LFC------- 557
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD-------I 141
+ LK + + I+KLGF+ + D+ + G D+ ++ P ++ +
Sbjct: 558 -----QSLKNVVENSKIVKLGFELRDDIRKIRQV----GADM--TQLGPLVEADAQDRQV 606
Query: 142 TSIYNHLHHKQLGR-KLPKETKSLANICKELLD-ISLSKELQCSDWSNRPLTEEQKNYAA 199
+++ H + R + K SLA + +E+LD L+KE SDWS RPL+ Q YAA
Sbjct: 607 NGVFDLSHWAKSSRPRTKKYQSSLAGLSREVLDGAELNKEQAMSDWSQRPLSAPQLRYAA 666
Query: 200 IDAHCLIEIF 209
+DA L+ +F
Sbjct: 667 LDALVLLPLF 676
>gi|383787263|ref|YP_005471832.1| hypothetical protein [Fervidobacterium pennivorans DSM 9078]
gi|383110110|gb|AFG35713.1| hypothetical protein Ferpe_1655 [Fervidobacterium pennivorans DSM
9078]
Length = 247
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 344 PPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVL 403
P + L+ +G PKF+ D+ + LA+ LR +GI A + E++ + E ++
Sbjct: 79 PKEYILTPKYEGVPKFILDIHLGKLARLLRMLGISAEYGVV---DDNEIVSKALSENLII 135
Query: 404 LTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQK 463
LTRD +L+ + I R QL EV + L+ + +RC +CNG+ I
Sbjct: 136 LTRDRGILKRNEVTYGYILRSDD--PKTQLREVTLRYSLQ-NWFAPFTRCMECNGKLISV 192
Query: 464 PLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNA---VQKFI 515
P + + +P+ + + +F +C C ++YW GT Y N ++KF+
Sbjct: 193 PKRDVQ--------EHVPEKVRETFDEFAKCERCGKIYWGGTHYENMSVFIEKFL 239
>gi|373456700|ref|ZP_09548467.1| protein of unknown function DUF82 [Caldithrix abyssi DSM 13497]
gi|371718364|gb|EHO40135.1| protein of unknown function DUF82 [Caldithrix abyssi DSM 13497]
Length = 240
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D + LA+ LR +G D + + E E++ KE+R++LTRD LL+++ +
Sbjct: 100 KFILDCNLGKLARKLRMLGFDCLYQNNYQDE--EIVQIALKERRIILTRDVGLLKNRAVT 157
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y V+S Q+ EV++ F L Q SRC +CNG + +P+ + +A
Sbjct: 158 HG--YWVRSTRPPAQVKEVLQKFDL-FRRIQPFSRCLECNG--VIEPVDKGDVEDA---- 208
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAV 511
+P + F++C C ++YW+G+ + V
Sbjct: 209 --LPQRVRQTFNTFYRCKRCKKIYWQGSHHEPPV 240
>gi|324504376|gb|ADY41890.1| Exonuclease mut-7, partial [Ascaris suum]
Length = 953
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 39/220 (17%)
Query: 24 HLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD 83
L SS++G+D EWKP S +V+LLQ+ S S + +V ++
Sbjct: 430 QLIEVFKTSSIIGIDTEWKPM--FLSTVEQVALLQV-----------SIPSCSYLVDVVK 476
Query: 84 LSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF--------------CSQGC 128
L W E K LF + +KLGF F D+ L +TF C
Sbjct: 477 LEDEVSEEEWIEFFKALFCTESSIKLGFDFANDMRVLRATFPFLESMQPDMKNVICIMKL 536
Query: 129 DIGF-DRVEPYLDITSIYNHLHHKQLGRKLPKETKS--------LANICKELLDISLSKE 179
LD+ + H E+ S L ++C +L L K
Sbjct: 537 ATSLMSENSASLDLPT--GEAHGSDSNENTTDESPSDEQQLHFKLTDLCYRILGEPLDKR 594
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
Q +W+ RPL EQ YAA+DA+CLI+I++ + + ++
Sbjct: 595 EQIGNWAMRPLRPEQMKYAAMDAYCLIKIYDRMKARATEE 634
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEK-RVLLTRDA---KLLRH 413
K + D M+ GL KHLR GID ++ L++ KE+ R +LT +LLR+
Sbjct: 696 KVIVDSMMFGLGKHLRRCGIDTILAETRDS----LVECAKKERERYILTSGKAYDELLRN 751
Query: 414 QYLI-KNQIY---RVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGR-FIQKPLSTE 468
+ L N+I ++++ +Q+ V++ F +K++++ + SRC CN + F+ P
Sbjct: 752 RALCGSNRILCVPAIQTMNAIEQIEYVLKRFHIKLNKEDIFSRCMLCNAQSFVIGPAPVL 811
Query: 469 EAVEAAKGFQRIP 481
EA+ A +P
Sbjct: 812 EAMYQANVVALLP 824
>gi|307719801|ref|YP_003875333.1| hypothetical protein STHERM_c21280 [Spirochaeta thermophila DSM
6192]
gi|306533525|gb|ADN03059.1| hypothetical protein STHERM_c21280 [Spirochaeta thermophila DSM
6192]
Length = 323
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR G D+ R E +++ + +E+R++LTRD LL + +
Sbjct: 169 PRFVLDVHLGKLARLLRICGFDSLYERDA--EDLDIVRRAHEERRIILTRDRALLMRKEV 226
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
Y V+S + QL EVI F L+ Q SRC CN PLS EA
Sbjct: 227 THG--YCVRSDIPRTQLEEVIRRFHLE-RNVQPFSRCPLCN-----TPLSPVHPAEAP-- 276
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
C C + YW+G+ Y N
Sbjct: 277 ---------------VTCPSCGKTYWKGSHYRN 294
>gi|292654903|ref|YP_003534800.1| hypothetical protein HVO_0740 [Haloferax volcanii DS2]
gi|448292879|ref|ZP_21483200.1| hypothetical protein C498_15033 [Haloferax volcanii DS2]
gi|291370599|gb|ADE02826.1| hypothetical protein HVO_0740 [Haloferax volcanii DS2]
gi|445571854|gb|ELY26397.1| hypothetical protein C498_15033 [Haloferax volcanii DS2]
Length = 188
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAA-----------------TPRSKKPEPRELIDQTS 397
G L DVM+ LA +LR G DA PR+ P L+ +
Sbjct: 23 GDTALLLDVMLGKLATYLRMCGYDAEYALDGGDETEDGADGARDPRTD-PGDDSLLARAD 81
Query: 398 KEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
E RVLLTRD +L + +N + + L QL E +E+ +S D+ SRC CN
Sbjct: 82 AEGRVLLTRDVRLA--ERAPRNVLLAEREPLA--QLRE-LESVGFAVSLDEEPSRCGVCN 136
Query: 458 GRFIQKPLSTEEAVEAAKGFQRIPDCLFDKN-LQFWQCMDCNQLYWEGTQYHNAVQKF 514
GR VEA + +PD D W+C DC Q++W G+ + + +
Sbjct: 137 GR-----------VEAVGRDEPVPDYAPDPGETALWRCRDCGQVFWRGSHWRDVETRL 183
>gi|346467133|gb|AEO33411.1| hypothetical protein [Amblyomma maculatum]
Length = 210
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 79 VFLLDLSSIPLP---SIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDR 134
VF+LD+ + S W EL E+ S ILKLG+ +DL L+ T + +R
Sbjct: 22 VFILDVPKLVAELQGSDWDELFSEVLSSHSILKLGYGIAEDLRLLADTVMRPSAKV--NR 79
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
V + T + + PK K LA + +L + L+K +CSDW RPL
Sbjct: 80 VVDLCNFTQKLQRDYPSVIKPVYPKLNCKGLAELTHLMLGLPLNKNERCSDWEKRPLRPS 139
Query: 194 QKNYAAIDAHCLIEIF 209
Q YAA+DA+CL++I+
Sbjct: 140 QTVYAALDAYCLLQIY 155
>gi|57340046|gb|AAW50010.1| hypothetical protein FTT0776 [synthetic construct]
Length = 399
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA + +
Sbjct: 32 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATE--------------NE 74
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 75 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 120
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 121 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 172
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 173 NYAIKDVEYLIQLKEYLQQQLAK 195
>gi|56707887|ref|YP_169783.1| ribonuclease D [Francisella tularensis subsp. tularensis SCHU S4]
gi|110670358|ref|YP_666915.1| ribonuclease D [Francisella tularensis subsp. tularensis FSC198]
gi|254370381|ref|ZP_04986386.1| hypothetical protein FTBG_00144 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874700|ref|ZP_05247410.1| ribonuclease D [Francisella tularensis subsp. tularensis MA00-2987]
gi|379717133|ref|YP_005305469.1| Ribonuclease D [Francisella tularensis subsp. tularensis TIGB03]
gi|379725737|ref|YP_005317923.1| ribonuclease D [Francisella tularensis subsp. tularensis TI0902]
gi|385794536|ref|YP_005830942.1| Ribonuclease D [Francisella tularensis subsp. tularensis NE061598]
gi|421755410|ref|ZP_16192356.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700075]
gi|56604379|emb|CAG45409.1| Ribonuclease D [Francisella tularensis subsp. tularensis SCHU S4]
gi|110320691|emb|CAL08792.1| Ribonuclease D [Francisella tularensis subsp. tularensis FSC198]
gi|151568624|gb|EDN34278.1| hypothetical protein FTBG_00144 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840699|gb|EET19135.1| ribonuclease D [Francisella tularensis subsp. tularensis MA00-2987]
gi|282159071|gb|ADA78462.1| Ribonuclease D [Francisella tularensis subsp. tularensis NE061598]
gi|377827186|gb|AFB80434.1| Ribonuclease D [Francisella tularensis subsp. tularensis TI0902]
gi|377828810|gb|AFB78889.1| Ribonuclease D [Francisella tularensis subsp. tularensis TIGB03]
gi|409088212|gb|EKM88289.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700075]
Length = 364
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|72161921|ref|YP_289578.1| hypothetical protein Tfu_1519 [Thermobifida fusca YX]
gi|71915653|gb|AAZ55555.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 241
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLL-RHQYL 416
+F+ DV + LA+ LR +G+D + + +P L+ Q ++E+R+LLTRD +L R
Sbjct: 90 RFILDVHLGTLARRLRLLGVDTVY-YTHRDDP-ALVQQANEEQRILLTRDRGILYRKNLR 147
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
IY ++QL EV++ + ++ +RC CNG PL+ + A
Sbjct: 148 AGGHIYASN---PDEQLFEVLDRYAPPLAP---WTRCLTCNG-----PLAQVDKDNIADQ 196
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCK 519
+D F QC +C Q+YW G +H + + I+ +
Sbjct: 197 LPAGTRATYDT---FVQCTECRQIYWPGA-HHARLTQIIEAAQ 235
>gi|310825342|ref|YP_003957700.1| hypothetical protein STAUR_8118 [Stigmatella aurantiaca DW4/3-1]
gi|309398414|gb|ADO75873.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 249
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ DV + LA LR +G D T E L + ++ R+LLTRD LL+ ++
Sbjct: 98 RFVLDVGLGRLAGFLRMLGFD--TLWRNDFEDSALARLSQEDARILLTRDLGLLKRAEVL 155
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y ++ + QL+EV+ FQL Q +RC CN E
Sbjct: 156 HG--YFPRNTNPSHQLVEVVLRFQLA-PWMQPFTRCMACNALL--------AVAERNDVL 204
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCK 519
R+P + ++ F QC C ++YW GT +H +Q ++D +
Sbjct: 205 GRVPAGVAAMHIHFQQCPSCQRVYWPGT-HHQRMQAWVDTLR 245
>gi|404450237|ref|ZP_11015222.1| ribonuclease D [Indibacter alkaliphilus LW1]
gi|403764197|gb|EJZ25111.1| ribonuclease D [Indibacter alkaliphilus LW1]
Length = 200
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 35/198 (17%)
Query: 17 TESPEFTH-LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESN 75
E+ E H A+ L++ +L+G D E +P + +VSLLQL S
Sbjct: 26 VETEEQIHEAAQELNRHTLIGFDTETRPSFRKGVQY-QVSLLQL--------------ST 70
Query: 76 ASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRV 135
A V FL L I LPS +K + +P I+K+G DL L IGF +
Sbjct: 71 AEVAFLFRLHQIGLPSS---IKAILENPKIVKIGAAVLDDLRGLKK------ISIGF-QP 120
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
+ + D+ + + +G + N+ +LDI +SK Q S+W LT++QK
Sbjct: 121 KSFFDLNAELKKVGFHNVGVR---------NLSAMVLDIRISKSEQVSNWEAPELTDKQK 171
Query: 196 NYAAIDAHCLIEIFNIFQ 213
YAA DA +E++ Q
Sbjct: 172 VYAATDAWVCLEVYKKLQ 189
>gi|134302344|ref|YP_001122313.1| putative ribonuclease D [Francisella tularensis subsp. tularensis
WY96-3418]
gi|421752196|ref|ZP_16189228.1| ribonuclease D [Francisella tularensis subsp. tularensis AS_713]
gi|421754061|ref|ZP_16191044.1| ribonuclease D [Francisella tularensis subsp. tularensis 831]
gi|421757785|ref|ZP_16194655.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700103]
gi|421759628|ref|ZP_16196457.1| ribonuclease D [Francisella tularensis subsp. tularensis 70102010]
gi|424674949|ref|ZP_18111861.1| ribonuclease D [Francisella tularensis subsp. tularensis 70001275]
gi|134050121|gb|ABO47192.1| putative ribonuclease D [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409085560|gb|EKM85698.1| ribonuclease D [Francisella tularensis subsp. tularensis 831]
gi|409085718|gb|EKM85850.1| ribonuclease D [Francisella tularensis subsp. tularensis AS_713]
gi|409090457|gb|EKM90474.1| ribonuclease D [Francisella tularensis subsp. tularensis 70102010]
gi|409091730|gb|EKM91720.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700103]
gi|417434204|gb|EKT89163.1| ribonuclease D [Francisella tularensis subsp. tularensis 70001275]
Length = 364
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|346466963|gb|AEO33326.1| hypothetical protein [Amblyomma maculatum]
Length = 190
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 79 VFLLDLSSIP---LPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDR 134
VF+LD+ + S W+ L E+ S ILKLG+ +DL ++ T +
Sbjct: 22 VFILDMLRLVGELQASDWDKLFSEILSSHKILKLGYGIAEDLRLVAETVMQPNA-----K 76
Query: 135 VEPYLDITSIYNHLHHKQLGRKLP----KETKSLANICKELLDISLSKELQCSDWSNRPL 190
V LD+ + L H G P ++ K LA + L + L+K +CS+W RPL
Sbjct: 77 VSRVLDLCNFAQKLRHDYPGVIKPVDPRRKCKGLAELTYSTLGLPLNKSERCSNWEKRPL 136
Query: 191 TEEQKNYAAIDAHCLIEIFN 210
Q YAA+DA+CL++I+
Sbjct: 137 RPSQTVYAALDAYCLLQIYE 156
>gi|443469777|ref|ZP_21059920.1| Hypothetical protein ppKF707_1279 [Pseudomonas pseudoalcaligenes
KF707]
gi|442899261|gb|ELS25749.1| Hypothetical protein ppKF707_1279 [Pseudomonas pseudoalcaligenes
KF707]
Length = 252
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E ++ ++E R++LTRD +LL+ + +I
Sbjct: 97 RFIADAHLGGLASLLRMSGFD--TLYDNGFEDGQIAGIAAREGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y + +L QL E+ E L S + SRC CNG PL E A E A+
Sbjct: 154 THGCY-IHALKPALQLRELFERLDLARSANPF-SRCLHCNG-----PLK-EVAPEQAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
++P + +++ +F+ C C +LYWEG+ + +
Sbjct: 204 PQVPPRVRERHSRFFGCDACQRLYWEGSHWRS 235
>gi|410028432|ref|ZP_11278268.1| ribonuclease D [Marinilabilia sp. AK2]
Length = 200
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 36/204 (17%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+I LV S + + +A L++ SL+G D E +P + + VSLLQLA +
Sbjct: 22 EIVLVNSKD--QIKEVAAELNRHSLLGFDTETRPSFRKGTQY-YVSLLQLATE------- 71
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
FL+ L+ I +P++ ++E+ P I+K+G DL L +
Sbjct: 72 -------ETAFLIRLNEIGMPAV---IQEILEDPQIIKIGAAVLDDLRAL------RKVA 115
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
+GF E + D+ + + +G + N+ +L++ +SK Q S+W
Sbjct: 116 VGF-HPESFFDLNDELKKVGFQNIGVR---------NLAAMVLNMRISKSEQVSNWEAAE 165
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE+Q+ YAA DA +EI+ Q
Sbjct: 166 LTEKQQLYAATDAWVCLEIYKKLQ 189
>gi|187931952|ref|YP_001891937.1| ribonuclease D [Francisella tularensis subsp. mediasiatica FSC147]
gi|187712861|gb|ACD31158.1| ribonuclease D [Francisella tularensis subsp. mediasiatica FSC147]
Length = 364
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|89256742|ref|YP_514104.1| ribonuclease D [Francisella tularensis subsp. holarctica LVS]
gi|115315142|ref|YP_763865.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
gi|254368041|ref|ZP_04984061.1| ribonuclease D [Francisella tularensis subsp. holarctica 257]
gi|422939063|ref|YP_007012210.1| ribonuclease D [Francisella tularensis subsp. holarctica FSC200]
gi|89144573|emb|CAJ79888.1| Ribonuclease D [Francisella tularensis subsp. holarctica LVS]
gi|115130041|gb|ABI83228.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
gi|134253851|gb|EBA52945.1| ribonuclease D [Francisella tularensis subsp. holarctica 257]
gi|407294214|gb|AFT93120.1| ribonuclease D [Francisella tularensis subsp. holarctica FSC200]
Length = 364
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|302553821|ref|ZP_07306163.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
gi|302471439|gb|EFL34532.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
Length = 245
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G D A + +P L +++ E+RV+L+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGADTAYESTDIGDP-ALAARSAAEQRVMLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM--SRCTKCNGRFIQKPLSTEEAV 471
+ L V S +QL +V+ F E +L+ +RCT CNG +++ E A
Sbjct: 145 RELWAGAF--VYSTRPEEQLWDVLGRF-----EPELLPWTRCTACNG-VLREATKDEVAD 196
Query: 472 EAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
+ G D F QC C + YW G +H ++ ++
Sbjct: 197 QLKHGTHATYDV-------FAQCSACGRAYWRGA-HHEQLEAIVE 233
>gi|156502902|ref|YP_001428967.1| ribonuclease D [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|290953633|ref|ZP_06558254.1| ribonuclease D [Francisella tularensis subsp. holarctica URFT1]
gi|423051113|ref|YP_007009547.1| ribonuclease D [Francisella tularensis subsp. holarctica F92]
gi|156253505|gb|ABU62011.1| ribonuclease D [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|421951835|gb|AFX71084.1| ribonuclease D [Francisella tularensis subsp. holarctica F92]
Length = 363
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|115373512|ref|ZP_01460809.1| hypothetical protein STIAU_3289 [Stigmatella aurantiaca DW4/3-1]
gi|115369518|gb|EAU68456.1| hypothetical protein STIAU_3289 [Stigmatella aurantiaca DW4/3-1]
Length = 250
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ DV + LA LR +G D T E L + ++ R+LLTRD LL+ ++
Sbjct: 99 RFVLDVGLGRLAGFLRMLGFD--TLWRNDFEDSALARLSQEDARILLTRDLGLLKRAEVL 156
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y ++ + QL+EV+ FQL Q +RC CN E
Sbjct: 157 HG--YFPRNTNPSHQLVEVVLRFQLA-PWMQPFTRCMACNALL--------AVAERNDVL 205
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCK 519
R+P + ++ F QC C ++YW GT +H +Q ++D +
Sbjct: 206 GRVPAGVAAMHIHFQQCPSCQRVYWPGT-HHQRMQAWVDTLR 246
>gi|124028012|ref|YP_001013332.1| hypothetical protein Hbut_1150 [Hyperthermus butylicus DSM 5456]
gi|123978706|gb|ABM80987.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 178
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ D M+ LA+ LR +G D T +K ++++ + R+++TRD L R + L
Sbjct: 10 PRFIVDSMLGSLARWLRMIGYD--TVYAKGWHDSRILEEAATTGRIVVTRDRGLYR-RAL 66
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ + S L + F +++S D SRC CN +P S EE +G
Sbjct: 67 RRGLTAVLVSEDLAYSLALLSLKFGVELSIDPNQSRCPLCNAPL--RPASKEEV----RG 120
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
R+P +++ +FW C C+Q+YW G +
Sbjct: 121 --RVPPRVYEAYDEFWVCTGCSQVYWRGGHWRG 151
>gi|436840612|ref|YP_007324990.1| 3'-5' exonuclease [Desulfovibrio hydrothermalis AM13 = DSM 14728]
gi|432169518|emb|CCO22886.1| 3'-5' exonuclease [Desulfovibrio hydrothermalis AM13 = DSM 14728]
Length = 198
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 83/188 (44%), Gaps = 41/188 (21%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
LS+ L+G D E +P ++P SL+QLA V+LL LS I
Sbjct: 44 LSKCKLLGFDTETRPVFRKGLSYPP-SLIQLATD--------------DCVYLLHLSHI- 87
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQG-CDIGFDRVEPYLDITSIY 145
S+ + +K+L S DI+K G D+ L S F +G D+G
Sbjct: 88 --SLSDYIKKLLSSADIIKTGVAVINDVKELRQVSPFDGKGFVDLG-------------- 131
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
L R L +T L N+ LL +SK +QCS+W + LT +Q YAA DA
Sbjct: 132 ------DLARSLEMQTNGLRNLAANLLGFRISKGVQCSNWGRKELTPQQLTYAATDAWVS 185
Query: 206 IEIFNIFQ 213
EI+ F+
Sbjct: 186 REIYLKFK 193
>gi|453052700|gb|EMF00178.1| hypothetical protein H340_12872 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 255
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P L +++ E+RV+L+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALAARSAAERRVMLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPL-STEEAVE 472
+ L V S + QL +V+ F ++ +RCT CNG S + +E
Sbjct: 145 RELWAGAY--VYSDRPDDQLRDVLGRFAPPLAP---WTRCTACNGELRDADKDSVGDLLE 199
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+G R D F QC C ++YW G +
Sbjct: 200 --RGTSRTYDV-------FAQCAACERVYWRGAHH 225
>gi|386876210|ref|ZP_10118339.1| hypothetical protein BD31_I0714 [Candidatus Nitrosopumilus salaria
BD31]
gi|386805991|gb|EIJ65481.1| hypothetical protein BD31_I0714 [Candidatus Nitrosopumilus salaria
BD31]
Length = 156
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FL D M+ +AK L +G D T ELI++ E R+++++D +L+ H
Sbjct: 3 FLVDGMLGNVAKKLLLLGYD--TDYFSGMSDLELIEKAKNEDRIIISKDLQLIAHAKKST 60
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISED-QLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Q + + +Q LE++ L++++ +RCTKCN S ++ K
Sbjct: 61 VQTIPITKEDEIEQFLEILGFVHLELNKICGETARCTKCN--------SLTYEIDKLKIS 112
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
++P + + N +FW+C C+++YWEGT
Sbjct: 113 NKVPPKVLEFNEKFWKCDKCHKIYWEGTH 141
>gi|118497275|ref|YP_898325.1| ribonuclease D [Francisella novicida U112]
gi|194323578|ref|ZP_03057355.1| ribonuclease D [Francisella novicida FTE]
gi|208779068|ref|ZP_03246414.1| ribonuclease D [Francisella novicida FTG]
gi|118423181|gb|ABK89571.1| ribonuclease D [Francisella novicida U112]
gi|194322433|gb|EDX19914.1| ribonuclease D [Francisella tularensis subsp. novicida FTE]
gi|208744868|gb|EDZ91166.1| ribonuclease D [Francisella novicida FTG]
Length = 364
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DI+K+ D+ + F C++
Sbjct: 49 IFLIDTLEDLEFKK----LKEIFEDKDIIKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|134101705|ref|YP_001107366.1| zinc finger protein [Saccharopolyspora erythraea NRRL 2338]
gi|291003124|ref|ZP_06561097.1| putative zinc finger protein [Saccharopolyspora erythraea NRRL
2338]
gi|133914328|emb|CAM04441.1| putative zinc finger protein [Saccharopolyspora erythraea NRRL
2338]
Length = 242
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL DV + LA+ LR +G+D A + ELI++ ++E RVLLT+D LLR + L
Sbjct: 88 PRFLLDVHLGKLARRLRLLGVDTAY--RNDADDDELIERAAREHRVLLTQDRGLLRRRAL 145
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V+ QL +V++ F ++ +RCT CNG P E E G
Sbjct: 146 RAGAY--VRGTDPAGQLTDVLDRFAPPLAP---WTRCTSCNGELAAVP-KQEVLPEIQPG 199
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
+R D + +C DC ++YW G
Sbjct: 200 TRRYYD-------DYARCRDCGRVYWRGAH 222
>gi|385792618|ref|YP_005825594.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676764|gb|AEB27634.1| Ribonuclease D [Francisella cf. novicida Fx1]
Length = 364
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 42/193 (21%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEI 208
NYA D LI++
Sbjct: 147 NYAIKDVEYLIQL 159
>gi|254372648|ref|ZP_04988137.1| ribonuclease III [Francisella tularensis subsp. novicida GA99-3549]
gi|151570375|gb|EDN36029.1| ribonuclease III [Francisella novicida GA99-3549]
Length = 364
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DI+K+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDIIKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|302539957|ref|ZP_07292299.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302457575|gb|EFL20668.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length = 244
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P L +++ ++RVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALAARSAAQRRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S ++QL +V+ F ++ +RCT CNG PL +
Sbjct: 145 RELWAGAY--VYSDRPDEQLRDVLGRFTPSLAP---WTRCTACNG-----PLEDADKDTV 194
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ + +D F +C C ++YW G +
Sbjct: 195 HERLEHGTRSTYD---VFARCAACERVYWRGAHH 225
>gi|126466198|ref|YP_001041307.1| hypothetical protein Smar_1308 [Staphylothermus marinus F1]
gi|126015021|gb|ABN70399.1| protein of unknown function DUF82 [Staphylothermus marinus F1]
Length = 178
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 16/154 (10%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
PKF+ D M+ +A+ LR +G D T +K E +++D KE R+++TRD + L H+ L
Sbjct: 11 PKFIVDTMLGNVARWLRMLGYD--TLYDRKYEDWKILDIARKEGRIIITRD-RGLHHRAL 67
Query: 417 ---IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
IK+ + + + + + +L I D+ SRC CNG + + ++ VE
Sbjct: 68 NNGIKSIYLDMDEVSERLAYIAYVAGIRLHIDMDK--SRCPLCNGELRK---AKKKEVEG 122
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P ++ + FW C C ++YW G+ +
Sbjct: 123 -----KVPRKVYLLHDDFWICTRCGKIYWIGSHW 151
>gi|254374109|ref|ZP_04989591.1| ribonuclease D [Francisella novicida GA99-3548]
gi|151571829|gb|EDN37483.1| ribonuclease D [Francisella novicida GA99-3548]
Length = 364
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DI+K+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDIIKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|257093662|ref|YP_003167303.1| hypothetical protein CAP2UW1_2078 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046186|gb|ACV35374.1| protein of unknown function DUF82 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 262
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ DV + GLA+ LR G D S E I +E R++LTRD LL+ + I
Sbjct: 96 RFVADVHLGGLARLLRMAGFDTWYDNSLDDAGIERI--AGREGRIVLTRDRDLLKRRA-I 152
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL EV+ L Q +SRC KCN PL AVE A
Sbjct: 153 THGCY-VHALKPDGQLSEVLARLDL-FGSMQPLSRCLKCNA-----PLM---AVEKALIL 202
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
+P + + F C C +++WEG+ + + + +
Sbjct: 203 DALPPRVREHQQHFSTCAVCRRVFWEGSHWRHMLDRL 239
>gi|147669048|ref|YP_001213866.1| hypothetical protein DehaBAV1_0403 [Dehalococcoides sp. BAV1]
gi|289432317|ref|YP_003462190.1| hypothetical protein DehalGT_0367 [Dehalococcoides sp. GT]
gi|146269996|gb|ABQ16988.1| protein of unknown function DUF82 [Dehalococcoides sp. BAV1]
gi|288946037|gb|ADC73734.1| protein of unknown function DUF82 [Dehalococcoides sp. GT]
Length = 167
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 40/175 (22%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL D V LA +LR +G DA R R+L+ + E RV+LTRD LLR + L
Sbjct: 8 PRFLVDQNVGKLAVYLRMLGFDAR--RFGNGSDRQLLSEALAEGRVILTRD-HLLRERRL 64
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL---------------MSRCTKCNGRFI 461
+K K LK + F+++++EDQL SRC +CN +
Sbjct: 65 VK------KGNLK-------VMLFEIEVAEDQLRQLLSDMALHSFILPFSRCIECN--YP 109
Query: 462 QKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
P+ E E ++P ++ +F +C C +++W+G+ + A+Q+ ++
Sbjct: 110 LYPVMKETLSE------KVPPYVYQNQTEFKECHHCGRVFWKGSHWQ-AMQEVLN 157
>gi|393911852|gb|EFO26611.2| hypothetical protein LOAG_01867 [Loa loa]
Length = 925
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 34/231 (14%)
Query: 12 HLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
H + +PE L + ++ L+G+D EWKP S RV+L Q+ +
Sbjct: 406 HPIKVIATPEDLEKLYPVIEEADLIGIDTEWKPLFMCTSE--RVALFQICVRRC------ 457
Query: 71 SDESNASVVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF------ 123
+ +V ++ L + W + K LF +KLGF F DL L ++F
Sbjct: 458 -----SYLVDVITLEDVLTKEQWTQFFKALFSDSPAIKLGFDFLNDLRVLHASFPYLQPL 512
Query: 124 -------CSQGCDIGFDRVEP-YLDITSIYN---HLHHKQLGRKLPKETKS--LANICKE 170
C P +LD N ++ L + ET L ++C+
Sbjct: 513 EEMKNVICVLKLVKNLLTSNPAFLDFGHSANLSLSSRNENLLDAVSDETVHFRLTDLCQM 572
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
+L +L K Q +W+ RPL EQ YAA+D +CL+++++ +++ ++ N
Sbjct: 573 VLGEALDKTEQIGNWAMRPLRREQMKYAAMDGYCLLDLYDKLKIRAEREYN 623
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 29/185 (15%)
Query: 307 RECDKAPKTSK--KKGRKRSSVIVDSR-----EKRLDDIGDWQGP-PPWDLSLGGDGYPK 358
+ECD SK +K RK+ + + D E+ + D Q P DL K
Sbjct: 631 KECDVTQIKSKEERKARKKGTKLDDKEFELMIERVNCGLNDSQMKRKPEDL--------K 682
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKE-KRVLLTRDA---KLLRHQ 414
+ D M+ GL KHLR GID ++ LI+ ++ R ++T +L RH+
Sbjct: 683 IIVDSMMLGLGKHLRRCGIDTILAETRSY----LIECAERDPNRYIITCGKAIDELRRHR 738
Query: 415 YLIKN----QIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGR-FIQKPLSTEE 469
L I +++ QQ+ V+ F + +S+D + SRC KCN F+ P E
Sbjct: 739 SLRGTLRILSIPNAQNMNIIQQIEFVLRQFNVHLSKDDVFSRCMKCNSNSFVIAPSPVLE 798
Query: 470 AVEAA 474
A+ A
Sbjct: 799 AMHQA 803
>gi|157363249|ref|YP_001470016.1| hypothetical protein Tlet_0385 [Thermotoga lettingae TMO]
gi|157313853|gb|ABV32952.1| protein of unknown function DUF82 [Thermotoga lettingae TMO]
Length = 151
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEP-RELIDQTSKEKRVLLTRDAKLLRHQYLI 417
F D M+ LAK LR +G D + K E +L QT R+L+TRD L H+ I
Sbjct: 2 FFVDRMLGKLAKKLRLLGFDTMYINNIKEEAILQLCQQTG---RILITRDKTL--HRKAI 56
Query: 418 KNQI--YRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
K + + + S + QL+E+ + F L+ +D++M RC+ CN + +S+ E +
Sbjct: 57 KKGLKSFLINSEMWRDQLVELSKVFDLR-KKDKIMMRCSLCN---VDLVISSNEQIR--- 109
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
+++P + + F+ C C ++YWEGT + ++F
Sbjct: 110 --KKVPLYVQETQDVFYTCPICGRVYWEGTHVQHIFEEF 146
>gi|318056414|ref|ZP_07975137.1| hypothetical protein SSA3_00622 [Streptomyces sp. SA3_actG]
gi|318077536|ref|ZP_07984868.1| hypothetical protein SSA3_12662 [Streptomyces sp. SA3_actF]
Length = 249
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL DV + LA+ LR +G+D A R +P L +++ E RVLL+RD LL + L
Sbjct: 90 RFLLDVHLGTLARRLRLLGVDTAYQREDPGDP-ALAARSAAEHRVLLSRDRGLLHRRELW 148
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
V S +QL +V+ F+ ++ +RCT CN PL + A
Sbjct: 149 AGAY--VYSHRPEEQLPDVLNRFRPRLHP---WTRCTACN-----APLRPATPADVADRI 198
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
+D + +C C ++YW G +H+ + + +
Sbjct: 199 AAGTRATYDV---YAECPACGRVYWRGA-HHDRLARIV 232
>gi|240103213|ref|YP_002959522.1| hypothetical protein TGAM_1156 [Thermococcus gammatolerans EJ3]
gi|239910767|gb|ACS33658.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3]
Length = 154
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D+M+ LA+ LR G D E +I+ KE RV+LT+D L R +
Sbjct: 2 KFIADMMLGRLARWLRLYGHDTLYGIENDDE---IIEVARKEGRVILTKDVALARKAEKL 58
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQ-LKISEDQLM---SRCTKCNGRFIQKPLSTEEAVEA 473
+++ LL++ L E +E + L + +L +RC KCNG P E
Sbjct: 59 GVKVF----LLRSNSLEEQVEELKRLGVEFKELFPANARCPKCNGPIRAVP------KEV 108
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
KG ++P +++ +F+ C +C Q+YW G Q+ ++
Sbjct: 109 VKG--KVPSKVYENYNEFYVCENCGQIYWPGKQWREMLK 145
>gi|269925402|ref|YP_003322025.1| hypothetical protein Tter_0281 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789062|gb|ACZ41203.1| protein of unknown function DUF82 [Thermobaculum terrenum ATCC
BAA-798]
Length = 267
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 354 DGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
D PKF+ D + LA +LR +G D T +L + + R+LLTRD LL+
Sbjct: 103 DPNPKFVLDAHLGKLAGYLRMLGFD--TIYDPDSSDLDLAFASKADGRILLTRDIGLLKR 160
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ + + Y V+ +Q++EVI+ F+L + + RC CN I P E +
Sbjct: 161 KIVFRG--YYVRETEPKRQIIEVIKQFKL-LDKINPFGRCAHCNDLLIDVP--KREIIHL 215
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
+P + + +F +C C ++YW+G+ +H A+ + I+
Sbjct: 216 L-----LPKTILYYD-EFRRCRGCGKIYWKGS-HHEAILRLIE 251
>gi|312068949|ref|XP_003137453.1| hypothetical protein LOAG_01867 [Loa loa]
Length = 911
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 34/231 (14%)
Query: 12 HLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
H + +PE L + ++ L+G+D EWKP S RV+L Q+ +
Sbjct: 392 HPIKVIATPEDLEKLYPVIEEADLIGIDTEWKPLFMCTSE--RVALFQICVRRC------ 443
Query: 71 SDESNASVVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF------ 123
+ +V ++ L + W + K LF +KLGF F DL L ++F
Sbjct: 444 -----SYLVDVITLEDVLTKEQWTQFFKALFSDSPAIKLGFDFLNDLRVLHASFPYLQPL 498
Query: 124 -------CSQGCDIGFDRVEP-YLDITSIYN---HLHHKQLGRKLPKETKS--LANICKE 170
C P +LD N ++ L + ET L ++C+
Sbjct: 499 EEMKNVICVLKLVKNLLTSNPAFLDFGHSANLSLSSRNENLLDAVSDETVHFRLTDLCQM 558
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
+L +L K Q +W+ RPL EQ YAA+D +CL+++++ +++ ++ N
Sbjct: 559 VLGEALDKTEQIGNWAMRPLRREQMKYAAMDGYCLLDLYDKLKIRAEREYN 609
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 29/185 (15%)
Query: 307 RECDKAPKTSK--KKGRKRSSVIVDSR-----EKRLDDIGDWQGP-PPWDLSLGGDGYPK 358
+ECD SK +K RK+ + + D E+ + D Q P DL K
Sbjct: 617 KECDVTQIKSKEERKARKKGTKLDDKEFELMIERVNCGLNDSQMKRKPEDL--------K 668
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKE-KRVLLTRDA---KLLRHQ 414
+ D M+ GL KHLR GID ++ LI+ ++ R ++T +L RH+
Sbjct: 669 IIVDSMMLGLGKHLRRCGIDTILAETRS----YLIECAERDPNRYIITCGKAIDELRRHR 724
Query: 415 YLIKN----QIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGR-FIQKPLSTEE 469
L I +++ QQ+ V+ F + +S+D + SRC KCN F+ P E
Sbjct: 725 SLRGTLRILSIPNAQNMNIIQQIEFVLRQFNVHLSKDDVFSRCMKCNSNSFVIAPSPVLE 784
Query: 470 AVEAA 474
A+ A
Sbjct: 785 AMHQA 789
>gi|223477060|ref|YP_002581645.1| hypothetical protein [Thermococcus sp. AM4]
gi|214032286|gb|EEB73116.1| conserved hypothetical protein [Thermococcus sp. AM4]
Length = 154
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 17/158 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D+M+ LA+ LR G D + E+I+ +E RV+LT+D L R +
Sbjct: 2 KFIADMMLGRLARWLRLYGHDTLYGIE---DDEEIIETAKRENRVILTKDVALARRAERL 58
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM---SRCTKCNGRFIQKPLSTEEAVEAA 474
++ ++S N +V E +L + +L +RC KCNG P +EAV
Sbjct: 59 GVNVFLLRS---NSLEDQVAELKRLGVEFGELFPANARCPKCNGPIKAVP---KEAVR-- 110
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
+R+ ++++ +F+ C +C Q+YW G Q+ ++
Sbjct: 111 ---ERVSPKVYERYDEFYVCQNCGQIYWPGRQWEEMLK 145
>gi|328770378|gb|EGF80420.1| hypothetical protein BATDEDRAFT_88588 [Batrachochytrium
dendrobatidis JAM81]
Length = 715
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 25/178 (14%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+G+DAEW Q S R+S+ Q+A N S V++LDL ++ L
Sbjct: 553 IGIDAEWYNQGSD-----RMSIFQIAV----LLNDTSRR-----VYILDLFNLDLTETCN 598
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY--LDITSIYNHLHHKQ 152
+L LF S I LGF QDL L++ + PY +D+ + L +
Sbjct: 599 VLTALFSSKRITTLGFDGVQDLKKLNALMPNLPL--------PYNLVDLNKLSMELFADK 650
Query: 153 LGRK-LPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L R + K+ L+++ +LD +L K ++ +DW+ RPL + Q YAA D+ LI+I+
Sbjct: 651 LKRHDIKKQQLGLSDLVLVVLDKTLDKRVRLTDWNRRPLRQCQLTYAASDSDVLIDIY 708
>gi|338731417|ref|YP_004660809.1| hypothetical protein Theth_1666 [Thermotoga thermarum DSM 5069]
gi|335365768|gb|AEH51713.1| protein of unknown function DUF82 [Thermotoga thermarum DSM 5069]
Length = 151
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 20/160 (12%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F D M+ LAK LR +G D T + E E++ + R+L+TR+ +L H +K
Sbjct: 3 FFADRMLGKLAKKLRLLGFD--TLYLSQIEEDEILKLCFETGRILITRNREL--HMKALK 58
Query: 419 NQIYRVKSLLKN----QQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
I + LLK+ QQL+E+ + LK ++ M+RC+ CN I L+ E V+
Sbjct: 59 QGIRSL--LLKSDSWRQQLVELSKVLDLKNADR--MTRCSLCNAELI---LANPEKVK-- 109
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
Q++P + +F++C C +LYWEGT +A+++F
Sbjct: 110 ---QKVPLYVQQIRNEFYECPVCGRLYWEGTHVEHALEEF 146
>gi|386347898|ref|YP_006046147.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|339412865|gb|AEJ62430.1| protein of unknown function DUF82 [Spirochaeta thermophila DSM
6578]
Length = 253
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR G D+ R E +++ + +E+R++LTRD LL + +
Sbjct: 99 PRFVLDVHLGKLARLLRICGFDSIYERDA--EDLDIVRRAQEERRIILTRDRALLMRKEV 156
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
Y V+S + QL EVI F L+ S + SRC CN PL EA
Sbjct: 157 THG--YCVRSDIPRTQLEEVIRRFHLERSV-RPFSRCPLCN-----TPLPPAHPAEAP-- 206
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
C C + YW+G+ Y N
Sbjct: 207 ---------------VTCPSCGKTYWKGSHYRN 224
>gi|345000318|ref|YP_004803172.1| hypothetical protein SACTE_2749 [Streptomyces sp. SirexAA-E]
gi|344315944|gb|AEN10632.1| protein of unknown function DUF82 [Streptomyces sp. SirexAA-E]
Length = 249
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 22/168 (13%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P L +++E+RVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALAALSARERRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ + V S +QL +V+ F ++ +RCT CNG + + +++V A
Sbjct: 145 REIWAGAY--VYSDRPAEQLRDVLGRFAPVLAP---WTRCTACNGELAE---ADKDSVRA 196
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY-------HNAVQKF 514
++ +D F +C C ++YW G + +AV++F
Sbjct: 197 --DLEQGTRATYD---VFARCTACGRVYWRGAHHARLEAVVADAVREF 239
>gi|296269524|ref|YP_003652156.1| hypothetical protein Tbis_1548 [Thermobispora bispora DSM 43833]
gi|296092311|gb|ADG88263.1| protein of unknown function DUF82 [Thermobispora bispora DSM 43833]
Length = 258
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL DV + LA+ LR +G+D A + LI + ++RVLLTRD LLR + L
Sbjct: 101 PRFLLDVHLGTLARRLRLLGVDTAY--GNDLDDDTLIVLANDQRRVLLTRDRGLLRRRSL 158
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEE-AVEAAK 475
R + QL +V+ F ++ +RC CN R + P+ + A +
Sbjct: 159 WLGAYVRGSD--PDDQLEDVLTRFAPPLAP---WTRCVACNDRLV--PVEKHDIAPQLQP 211
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
G +R D F +C C + YW G Y +
Sbjct: 212 GTRRTYDT-------FARCAACGRAYWRGAHYDH 238
>gi|254369642|ref|ZP_04985652.1| hypothetical protein FTAG_00956 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122601|gb|EDO66730.1| hypothetical protein FTAG_00956 [Francisella tularensis subsp.
holarctica FSC022]
Length = 364
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NY+ D LI++ Q ++A+
Sbjct: 147 NYSIKDVEYLIQLKEYLQQQLAK 169
>gi|302348763|ref|YP_003816401.1| hypothetical protein ASAC_0965 [Acidilobus saccharovorans 345-15]
gi|302329175|gb|ADL19370.1| hypothetical protein ASAC_0965 [Acidilobus saccharovorans 345-15]
Length = 174
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D M+ LAK LR +G D T SK +++ ++ R+++T D L R +
Sbjct: 6 KFIVDAMLGTLAKWLRMMGYD--TLYSKSYNDAQILSIAARTGRIIITSDKGLHRRAEKL 63
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
K + + + + L + +++ D +SRC CNG PL +G
Sbjct: 64 KLKAVLLPEVDVARNLARLASEGLIELRADPSISRCPICNG-----PLREVTDKNIIRG- 117
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKL 520
R+P + +F+ C+ C +YWEG ++N ++K ++ ++
Sbjct: 118 -RVPPGALARYGKFYVCVKCGHVYWEGGHWNN-IRKIVNDARM 158
>gi|345011425|ref|YP_004813779.1| hypothetical protein [Streptomyces violaceusniger Tu 4113]
gi|344037774|gb|AEM83499.1| protein of unknown function DUF82 [Streptomyces violaceusniger Tu
4113]
Length = 271
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P EL +++ ++RVLL+RD LLR
Sbjct: 110 GAPLRFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ELAARSAAQRRVLLSRDRGLLRR 168
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ L V S ++QL +V+ F ++ +RCT CNG + +E+V
Sbjct: 169 RELWAGAY--VYSDRPDEQLRDVLGRFTPSLAP---WTRCTACNGTLED---ADKESVRE 220
Query: 474 --AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
G +R + F +C C ++YW G H+A + I ++E
Sbjct: 221 LLQHGTRRTYEV-------FARCTVCERVYWRGA--HHARLEAIVAGAMDE 262
>gi|347522960|ref|YP_004780530.1| hypothetical protein Pyrfu_0407 [Pyrolobus fumarii 1A]
gi|343459842|gb|AEM38278.1| protein of unknown function DUF82 [Pyrolobus fumarii 1A]
Length = 200
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ D M+ LA+ LR +G D R+ P+PR L+ ++ R+++TRD L L
Sbjct: 6 PRFIVDSMLGDLARWLRLLGYDTLYYRNA-PDPR-LVTVALEQGRIIVTRDKGL---SIL 60
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLK----ISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
+ + RV +L+ + + E++ L+ + D SRC CN P +
Sbjct: 61 ARKKGARV-IMLRGENIEEMLAELHLRAGVALYADPGRSRCPLCNSPLRHVPKHEVK--- 116
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P ++ + FW C C Q+YW+G+ +
Sbjct: 117 -----DRVPPEVYVRYEDFWLCPKCGQVYWQGSHW 146
>gi|348687566|gb|EGZ27380.1| hypothetical protein PHYSODRAFT_321189 [Phytophthora sojae]
Length = 337
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 43/211 (20%)
Query: 26 ARALSQSSLVGLDAEWKPQRS-HQSNFPRV--SLLQLACQPGPRFNPESDESNASVVFLL 82
A+ L + +VG DAEWK R + N P +L+QLA + A VV ++
Sbjct: 126 AQYLMKQPVVGFDAEWKAIRVCAEPNNPTAPCALIQLASR-----------DKAFVVDMV 174
Query: 83 DLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT 142
+LS +L LF S +LKLGF D + + ++G F + +D+
Sbjct: 175 ELSGHD-----HILAPLFQSDQVLKLGFNPTGD-VKVFRPLLAEGGTTKFS-ITALVDLQ 227
Query: 143 SIYNHLHHK--------------------QLGRKLPKETKSLANICKELLDISLSKELQC 182
++ +L G + KE L+ + + L + L K ++
Sbjct: 228 AVARNLRGSGSSVNSNNPYAGCGDDNNCSTTGNEAFKE--GLSAVAETYLGLPLDKRVRM 285
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
SDW RPLT Q +YAA+DAH L++I++ Q
Sbjct: 286 SDWEGRPLTRAQLHYAALDAHVLLQIYDKMQ 316
>gi|148654504|ref|YP_001274709.1| hypothetical protein RoseRS_0327 [Roseiflexus sp. RS-1]
gi|148566614|gb|ABQ88759.1| protein of unknown function DUF82 [Roseiflexus sp. RS-1]
Length = 255
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ D + LA +LR +G D+ EL +E+R+LLTRD +LL+ +
Sbjct: 101 PRFVLDTHLGRLAAYLRMLGYDSLY--WNDAHDAELARLAGEERRILLTRDRELLKRSIV 158
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA-- 474
+ V+ ++ +Q++EV+ F L + + RC +CN S AVE A
Sbjct: 159 VYGSF--VREVIPARQIVEVMRRFNLTPT-STVFQRCMRCN--------SLTTAVEKADI 207
Query: 475 -KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ FD F +C+ C ++YW+G+ Y
Sbjct: 208 EHLLEPRTRLYFDT---FRRCIACGKIYWQGSHY 238
>gi|297527117|ref|YP_003669141.1| hypothetical protein Shell_1141 [Staphylothermus hellenicus DSM
12710]
gi|297256033|gb|ADI32242.1| protein of unknown function DUF82 [Staphylothermus hellenicus DSM
12710]
Length = 178
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 16/154 (10%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
PKF+ D M+ +A+ LR +G D T +K E +++D +E R+++TRD + L H+ L
Sbjct: 11 PKFIVDTMLGNVARWLRMLGYD--TLYDRKYEDWKILDIARREGRIIITRD-RGLHHRAL 67
Query: 417 ---IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
IK+ + + + + + +L I D+ SRC CNG + + ++ VE
Sbjct: 68 NNGIKSIYLDMDEMSERLAYIAYVAGIRLHIDMDK--SRCPICNGELRK---AKKKEVEG 122
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P ++ + FW C C ++YW G+ +
Sbjct: 123 -----KVPRKVYLLHDDFWICTRCGKIYWIGSHW 151
>gi|223940076|ref|ZP_03631940.1| protein of unknown function DUF82 [bacterium Ellin514]
gi|223891261|gb|EEF57758.1| protein of unknown function DUF82 [bacterium Ellin514]
Length = 231
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 352 GGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLL 411
G P+FLCD + GLA+ LR G +A + + +L+ + + K +LT D+ L+
Sbjct: 77 GQPAIPRFLCDAGLGGLARWLRASGYEAVWIQDINDD--DLLIEGQRLKATILTTDSMLM 134
Query: 412 RHQYL---IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTE 468
+ L I ++ +L +QL + + L++ SRC C G ++
Sbjct: 135 ERRVLRDRIIPAVWVPPTLTMLEQLALIFQELDLQMRG----SRCMACGGELLE------ 184
Query: 469 EAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
V+ RIP QF+QC C +L+W GT + +Q+
Sbjct: 185 --VDKESVSDRIPPRTLKWLDQFYQCSQCGKLFWHGTHWRKIIQRL 228
>gi|428200534|ref|YP_007079123.1| hypothetical protein Ple7327_0079 [Pleurocapsa sp. PCC 7327]
gi|427977966|gb|AFY75566.1| hypothetical protein Ple7327_0079 [Pleurocapsa sp. PCC 7327]
Length = 250
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ DV + LA LR +G D T E EL ++ E R+LLTRD +L +
Sbjct: 97 RFVLDVHLGKLASLLRMLGFD--TLYRNDYEDAELAQISALEDRILLTRDKGVLMRSLVT 154
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y V+ +Q++EV+ F L + RC +CNG KP+ V+
Sbjct: 155 YG--YYVRETNPEKQVVEVLRHFNL-FDAIKPFQRCMRCNGNI--KPIDKASIVDL---- 205
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYH---NAVQKFIDVCKLN 521
+P + + +F C C+Q+YW+G+ + A+++ I L+
Sbjct: 206 --VPSRISREIEEFHCCTGCSQIYWQGSHFQRMERAIERLISSASLS 250
>gi|345862969|ref|ZP_08815182.1| hypothetical protein TevJSym_ab00710 [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345876626|ref|ZP_08828392.1| hypothetical protein Rifp1Sym_ad00220 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226338|gb|EGV52675.1| hypothetical protein Rifp1Sym_ad00220 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|345125852|gb|EGW55719.1| hypothetical protein TevJSym_ab00710 [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 249
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FL D + LA+HLR +G D T REL + +++R+LL+RD LL +
Sbjct: 98 FLADAHLGKLARHLRMLGFD--TLFFNDLGDRELAELAGRQRRILLSRDRALLMRGTISH 155
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
+ ++S +QL +V++ F L SRC +CN + L T + K
Sbjct: 156 GSL--IRSTDPREQLRQVVQRFDLGHCLKPF-SRCMECN-----ELLRTTDKTMVLK--- 204
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
++P + ++ F QC C +++W+G+ Y +++FID
Sbjct: 205 QLPPGVAERYDAFLQCSGCGKVFWKGSHYRE-MRRFID 241
>gi|295838671|ref|ZP_06825604.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295827130|gb|EDY46041.2| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 256
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLL-RHQYL 416
+FL DV + LA+ LR +G+D+A + + P L +++ E RVLL+RD LL R Y+
Sbjct: 88 RFLLDVHLGTLARRLRLLGVDSAY-QPEDPGDPALAARSAAEHRVLLSRDRGLLHRRAYV 146
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
++ +QL +V+E F+ + + +RCT CN PL + + A
Sbjct: 147 YSHR--------PEEQLTDVLERFRPHL---RPWTRCTACN-----TPLRSATPADVADR 190
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
+D + C C Q+YW G +H+ + + +
Sbjct: 191 VAAGTRATYDV---YADCPACGQVYWRGA-HHDRLARVV 225
>gi|405964657|gb|EKC30115.1| Putative exonuclease mut-7-like protein [Crassostrea gigas]
Length = 737
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 50/240 (20%)
Query: 1 MDCTYRK----PLKIHLVTSTESPEFTHLARALSQSSL-VGLDAEWKPQRSHQSNFPRVS 55
MD Y K P I LV + E ++ LS+ L +G+D+EWKP S + R++
Sbjct: 247 MDAYYYKLNLDPSSIQLVDTKE--KYHECISRLSRPGLTIGVDSEWKP--SFGNTTQRIA 302
Query: 56 LLQLACQPGPRFNPESDESNASVVFLLD---LSSIPLPSIWELLKE-LFVSPDILKLGFK 111
L+Q A SD+ +FLLD L S+ S W LL LF + +++KLG+
Sbjct: 303 LMQFAT---------SDQ-----IFLLDMITLHSLLHKSDWFLLANALFCNEEMIKLGYG 348
Query: 112 FKQDLIYLSSTF-------------------CSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
F DL + T+ ++ D + + P S L K
Sbjct: 349 FDSDLKMVVKTYPFLKEPLTHLKRTVDLEKLAAKVIDKAINLM-PDTVGDSDDEGLEDKD 407
Query: 153 LGRKL---PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
G + E + L+ + ++ L+K Q SDW RPL Q YAA+DA L+E++
Sbjct: 408 SGVNVKFQAVEQRGLSELVRQCFGKPLNKGEQMSDWERRPLRNTQIQYAALDAFVLLEVY 467
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 86/211 (40%), Gaps = 49/211 (23%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ 414
G + + D M++GL + LR G+D + + ++ + +E R++L+ +Q
Sbjct: 531 GQFRVVVDSMLQGLGRQLRNCGVDVQILNYDE-DHQKAVQAAMQENRIVLSSGTP---YQ 586
Query: 415 YLIK----NQIYRVKSLL-KNQQLLEVIEAFQLKISEDQLMSRCTKCNG-RFIQKP---- 464
+ + Y V + L +Q++ V++ F++K+ ++ ++SRC CN F+Q P
Sbjct: 587 TICSKIGAERCYNVDNTLPAKEQIVGVLQHFKVKVKKEDILSRCQVCNSDNFLQIPSKDV 646
Query: 465 LSTEEAVEAAK-----------------------------------GFQRIPDCLFDKNL 489
L E E K IP +F
Sbjct: 647 LRMSEKAENMKRSHGAPPRDSWDEHMLTTYQINSRNTSFVKTGVDIRIDTIPQKIFSIVD 706
Query: 490 QFWQCMDCNQLYWEGTQYHNAVQKFIDVCKL 520
F+ C+ C +++WEG +A ++F V L
Sbjct: 707 SFYICVKCGKIFWEGPHMASACEQFAHVLNL 737
>gi|375082191|ref|ZP_09729259.1| hypothetical protein OCC_08155 [Thermococcus litoralis DSM 5473]
gi|374743079|gb|EHR79449.1| hypothetical protein OCC_08155 [Thermococcus litoralis DSM 5473]
Length = 158
Score = 62.8 bits (151), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 25/161 (15%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRD---AKLLRH 413
PKF+ D+M+ LA+ LR G D E++ +E RV+LTRD AK +
Sbjct: 6 PKFIADMMLGRLARWLRLYGYDTLYGIEND---EEILKVAKEEGRVILTRDEDLAKRCEN 62
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG--RFIQKPLSTEEAV 471
LIK+ + + +QL+E+ F+ E+ +RC KCNG R ++K
Sbjct: 63 AILIKSNKFEEQV----KQLMELGFEFKELFPEN---ARCPKCNGLIRRVKK-------- 107
Query: 472 EAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
E KG ++P+ +++ +F+ C C Q+YW G Q+ V+
Sbjct: 108 EEIKG--KVPEGVYEDYDEFYICTQCGQIYWPGRQWKEMVK 146
>gi|118387584|ref|XP_001026896.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89308663|gb|EAS06651.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 567
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 37/206 (17%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSH-QSNFPRVSLLQLACQPGPRFN 68
K+ + + +S +F + L + +GLD E++P + +N ++LLQLA Q
Sbjct: 380 KVFFINNVKSQDFEFAKKELESAKQIGLDGEFRPAVTKLDNNSQSLALLQLATQ------ 433
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKE-LFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
+ FL D ++ +ELL++ +F +P+ILK+G D+ ++S Q
Sbjct: 434 --------NYCFLFDPMALKNEKEYELLQQNIFQNPNILKIGHTISGDISMVASQLNGQ- 484
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKS-LANICKELLDISLSKELQCSDWS 186
+ F + LD+ + HK K P++ +S L+ I K L + Q S+WS
Sbjct: 485 --LNF---KGSLDLAKL-----HK---VKNPEQKQSSLSFIAK----FQLGE--QTSNWS 525
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIF 212
RPL E Q +Y A+DA+ I ++N +
Sbjct: 526 QRPLREAQIHYGALDAYISIALYNKY 551
>gi|341583053|ref|YP_004763545.1| hypothetical protein GQS_09875 [Thermococcus sp. 4557]
gi|340810711|gb|AEK73868.1| hypothetical protein GQS_09875 [Thermococcus sp. 4557]
Length = 154
Score = 62.8 bits (151), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLL-RHQYL 416
+F+ D+M+ LA+ LR G D + E+I +E RV+LTRD+ L R +
Sbjct: 2 RFIADMMLGRLARWLRLYGYDTLYGVE---DDDEIIRAALREGRVILTRDSGLAGRAEKR 58
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISE-DQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
I + L+ Q +E + F L+ E +RC KCNG + +P+S EE +
Sbjct: 59 GVGVILLSSNSLEGQ--VEELMRFGLEFRELFPANARCPKCNG--LIRPVSKEEVKD--- 111
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P+ ++++ +F+ C +C Q+YW G Q+
Sbjct: 112 ---RVPESVYERYDEFYVCENCGQIYWPGRQW 140
>gi|357412780|ref|YP_004924516.1| hypothetical protein Sfla_3579 [Streptomyces flavogriseus ATCC
33331]
gi|320010149|gb|ADW04999.1| protein of unknown function DUF82 [Streptomyces flavogriseus ATCC
33331]
Length = 249
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 26/170 (15%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P L +++++RV+L+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALAALSAEQRRVMLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ + V S ++QL +V+ F ++ +RCT CNG + + +++V +
Sbjct: 145 REIWAGAY--VYSDKPDEQLRDVLGRFAPALAP---WTRCTACNGDLTE---ADKDSVSS 196
Query: 474 --AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY-------HNAVQKF 514
+G Q D F QC C ++YW G + +AV++F
Sbjct: 197 RLEQGTQASYDV-------FAQCTACGRVYWRGAHHARLETIVEDAVREF 239
>gi|384494557|gb|EIE85048.1| hypothetical protein RO3G_09758 [Rhizopus delemar RA 99-880]
Length = 1413
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 29/180 (16%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
LSQS++ G+D EW P + N + +L+Q+A G +FLLDL ++
Sbjct: 1023 LSQSNVCGIDTEWVPAFATLGNPVKTALMQIASDIG------------GYIFLLDLKTL- 1069
Query: 89 LPS--------IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L S + ++L+ LF +ILK+ F F D L + S V LD
Sbjct: 1070 LSSENKMLYKLVEKILQFLFEDEEILKIAFDFTGDFQLLYQSIPSSKSW----NVAKLLD 1125
Query: 141 ITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ S+ + + + G+ + T LA + L +L+K Q S+W RPLTEEQ YA
Sbjct: 1126 LKSLTSPPKPNAENGQPI---TGGLAGVVSTYLGCTLNKRQQISNWEKRPLTEEQAIYAG 1182
>gi|452204711|ref|YP_007484840.1| hypothetical protein btf_392 [Dehalococcoides mccartyi BTF08]
gi|452111767|gb|AGG07498.1| hypothetical protein btf_392 [Dehalococcoides mccartyi BTF08]
Length = 167
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 40/175 (22%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL D V LA +LR +G DA R R+L+ + E RV+LTRD LLR + L
Sbjct: 8 PRFLVDQNVGKLAVYLRMLGFDAR--RFGNGSDRQLLSEALAEGRVILTRD-HLLRERRL 64
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL---------------MSRCTKCNGRFI 461
+K K LK + F+ +++EDQL SRC +CN +
Sbjct: 65 VK------KGNLK-------VMLFETEVAEDQLRQLLSDMALHSFILPFSRCIECN--YP 109
Query: 462 QKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
P+ E E ++P ++ +F +C C +++W+G+ + A+Q+ ++
Sbjct: 110 LYPVMKETLSE------KVPPYVYQNQTEFKECHHCGRVFWKGSHWQ-AMQEVLN 157
>gi|73748268|ref|YP_307507.1| hypothetical protein cbdb_A378 [Dehalococcoides sp. CBDB1]
gi|452203275|ref|YP_007483408.1| hypothetical protein dcmb_438 [Dehalococcoides mccartyi DCMB5]
gi|73659984|emb|CAI82591.1| hypothetical protein cbdbA378 [Dehalococcoides sp. CBDB1]
gi|452110334|gb|AGG06066.1| hypothetical protein dcmb_438 [Dehalococcoides mccartyi DCMB5]
Length = 167
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 40/175 (22%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL D V LA +LR +G DA R R+L+ + E RV+LTRD LLR + L
Sbjct: 8 PRFLVDQNVGKLAVYLRMLGFDAR--RFGNGSDRQLLSEALAEGRVILTRD-HLLRERRL 64
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL---------------MSRCTKCNGRFI 461
+K K LK + F+ +++EDQL SRC +CN +
Sbjct: 65 VK------KGNLK-------VMLFETEVAEDQLRQLLSDMVLHSFILPFSRCIECN--YP 109
Query: 462 QKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
P+ E E ++P ++ +F +C C +++W+G+ + A+Q+ ++
Sbjct: 110 LYPVMKETLSE------KVPPYVYQNQTEFKECHHCGRVFWKGSHWQ-AMQEVLN 157
>gi|408419947|ref|YP_006761361.1| hypothetical protein TOL2_C24960 [Desulfobacula toluolica Tol2]
gi|405107160|emb|CCK80657.1| conserved uncharacterized protein, DUF82 [Desulfobacula toluolica
Tol2]
Length = 248
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 345 PPWDLSLGGDGYP------KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSK 398
PP+++ L P +F+ DV V L + L +G D E E+ D K
Sbjct: 77 PPFNVGLPSFLRPQPLKRIRFVADVNVIKLGRLLILLGFDVIYSSFYSDE--EIADIAEK 134
Query: 399 EKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG 458
E R++LTRD LL+ +I + R+++ L Q+ E I F L+ + SRCT CN
Sbjct: 135 ENRIVLTRDTDLLKRSKIIFAR--RIRANLPYDQMAETIRFFGLE-NRISFFSRCTACNI 191
Query: 459 RFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ L T E + + F+ F+QC C ++W G+ Y
Sbjct: 192 K-----LVTIEKKDVMHLLEPKTKQYFN---TFFQCPHCKTVFWRGSHY 232
>gi|327400685|ref|YP_004341524.1| hypothetical protein Arcve_0793 [Archaeoglobus veneficus SNP6]
gi|327316193|gb|AEA46809.1| protein of unknown function DUF82 [Archaeoglobus veneficus SNP6]
Length = 169
Score = 62.4 bits (150), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 8/161 (4%)
Query: 353 GDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEK-RVLLTRDAKLL 411
G G KF+CD M+ LA LR G D S + + E K R+LLT+D +L
Sbjct: 7 GKGELKFICDRMLGKLATWLRIAGYDTLYVGSIEVDGNEDTYMVHNHKDRILLTKDRELY 66
Query: 412 RHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAV 471
R + +KS Q+ EV+ L + + +M+RC+ CN ++KP T+E
Sbjct: 67 RRAISAGRRALLIKSNSVAGQMKEVM---ALGVKFEPVMNRCSVCNA-LLRKP--TKEEA 120
Query: 472 EAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
+++ D + ++ + W C C +LYW G+ + N ++
Sbjct: 121 REVVEREKLGDDILER-YELWYCEKCRKLYWMGSHWRNMLR 160
>gi|386391074|ref|ZP_10075855.1| hypothetical protein DesU5LDRAFT_0444 [Desulfovibrio sp. U5L]
gi|385731952|gb|EIG52150.1| hypothetical protein DesU5LDRAFT_0444 [Desulfovibrio sp. U5L]
Length = 250
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F D LA LR +G DAA R+ E +L +Q ++E RV+L+RD L+ ++
Sbjct: 99 FAVDANAGRLALFLRTLGFDAAYDRNI--EDADLAEQAAREGRVVLSRDRDCLKRSAIVH 156
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
++ R +QL +V+ A+ L SRCT+CN + P+ +
Sbjct: 157 GRVIRANE--PREQLQDVLAAYGLA-PPYAAFSRCTRCNTPLV--PVDKAAVLP------ 205
Query: 479 RIPDCLFDKNL----QFWQCMDCNQLYWEGTQYHN 509
L K +F QC DC ++YW G+ + +
Sbjct: 206 ----LLLPKTRRYFEEFHQCPDCGRVYWPGSHHEH 236
>gi|433633606|ref|YP_007267233.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070017]
gi|432165199|emb|CCK62666.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070017]
Length = 252
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +G DA S + L D + E+R+LLTRD LL+ + +
Sbjct: 97 PRFVVDVNLGQLARLLRLLGFDAWW--SSAADDPTLADISLGEQRILLTRDRGLLKRKAI 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ L +Q LEV+ L +SRC +CNG P++ +E +
Sbjct: 155 THGLFVHSQHL--EEQALEVLRRLDLN-GRLAPLSRCMRCNGEL--APVAKDEVIGQ--- 206
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
+ + ++ F +C C ++YW G+ +H + +F++
Sbjct: 207 LEPLTSRYYES---FSRCSGCGRIYWPGS-HHARLVRFVE 242
>gi|195443106|ref|XP_002069280.1| GK21051 [Drosophila willistoni]
gi|194165365|gb|EDW80266.1| GK21051 [Drosophila willistoni]
Length = 587
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 106 LKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KE 160
L +GF DL L + Q + YLD+ +++ L ++ G +LP K
Sbjct: 442 LAIGFSITCDLAMLQRSLPLQ---LRLQTAHHYLDLRTVWLELKKQKYGVELPFGNVNKV 498
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
++L ++ L L+K QCS+W+NRPL EQ YAAIDA CL+ ++NI +V
Sbjct: 499 GEALTDLTLLCLGKKLNKSNQCSNWANRPLRREQILYAAIDARCLMLVYNILIDRV 554
>gi|154275864|ref|XP_001538777.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413850|gb|EDN09215.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 808
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S Q + VS++QLA
Sbjct: 574 KEITVHYCTSLQTME--RVAKLFLSETIVGLDVEWKAQASAQDSLVDNVSVIQLA----- 626
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSS 121
S E A +F L L + P S+ L LK + SPDI+K+G + D
Sbjct: 627 -----SKERIA--IFHLALFN-PANSLQHLLSPTLKRILESPDIVKVGVAIRAD------ 672
Query: 122 TFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--E 179
C++ R + +++ ++ + H + + K +LA +E L + L K E
Sbjct: 673 --CTRLYKYLGIRTDNICEVSRLHKVVKHHLNPKLIDKRLVNLAQQVEEHLGLPLDKDPE 730
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
++C WS + L Q Y A D + +++F++ + K Q
Sbjct: 731 IRCGGWSKK-LNYRQVQYVATDPYAALQLFHVLEAKRLQ 768
>gi|448543293|ref|ZP_21624862.1| hypothetical protein C460_09010 [Haloferax sp. ATCC BAA-646]
gi|448550179|ref|ZP_21628702.1| hypothetical protein C459_10392 [Haloferax sp. ATCC BAA-645]
gi|448559549|ref|ZP_21633623.1| hypothetical protein C458_17315 [Haloferax sp. ATCC BAA-644]
gi|445706837|gb|ELZ58710.1| hypothetical protein C460_09010 [Haloferax sp. ATCC BAA-646]
gi|445710939|gb|ELZ62734.1| hypothetical protein C458_17315 [Haloferax sp. ATCC BAA-644]
gi|445711954|gb|ELZ63740.1| hypothetical protein C459_10392 [Haloferax sp. ATCC BAA-645]
Length = 186
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 35/177 (19%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDA------------ATPRSKKPEPRE--LIDQTSKEK 400
G L DVM+ LA +LR G DA R + +P + L+ + E
Sbjct: 23 GDTALLLDVMLGKLATYLRMCGYDAEYALDGGGAGESDGGRDPRTDPADDGLLARADAEG 82
Query: 401 RVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEV--IEAFQLKISEDQLMSRCTKCNG 458
RVLLTRD +L + R L + + ++ +EA ++S D SRC CNG
Sbjct: 83 RVLLTRDVRL-------AERAPRSVLLAGREPVAQLRELEAVGFEVSLDDEPSRCGVCNG 135
Query: 459 RFIQKPLSTEEAVEAAKGFQRIPDCLFD-KNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
VEA + +PD D W+C DC Q++W G+ + + +
Sbjct: 136 -----------PVEAVGRDEPVPDYAPDPAETALWRCRDCGQVFWRGSHWRDVETRL 181
>gi|57640227|ref|YP_182705.1| hypothetical protein TK0292 [Thermococcus kodakarensis KOD1]
gi|57158551|dbj|BAD84481.1| hypothetical protein, conserved, DUF82 family [Thermococcus
kodakarensis KOD1]
Length = 154
Score = 62.0 bits (149), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 17/158 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D+M+ LA+ LR G D E +I + ++ R++LTRD+ L
Sbjct: 2 KFIADMMLGRLARWLRLYGYDTLY---GIVEDEVIIRKALEDDRIILTRDSGLAERARTA 58
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM---SRCTKCNGRFIQKPLSTEEAVEAA 474
+++ + S N +V E +L + +L +RC KCNG ++ P E
Sbjct: 59 GARVFLLSS---NSLEGQVEELKKLGVEFRELFPANARCPKCNGLIVRIP------KEEV 109
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
KG ++P+ ++++ +F+ C +C Q+YW G Q+ ++
Sbjct: 110 KG--KVPESVYERYEEFYVCKNCGQIYWPGRQWREMLR 145
>gi|448503447|ref|ZP_21613078.1| hypothetical protein C464_13390 [Halorubrum coriense DSM 10284]
gi|445692315|gb|ELZ44493.1| hypothetical protein C464_13390 [Halorubrum coriense DSM 10284]
Length = 178
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQY 415
P L DVM LA +LR G DAA + E + L + + E RVLLTRD L
Sbjct: 18 PPVLLDVMCGKLATYLRICGYDAAYALDRGIEADDRLRELAAAEDRVLLTRDRDLADRAP 77
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMS---RCTKCNGRFIQKPLSTEEAVE 472
+ V LL + +++ + F +L + RC CNG P+ ++ E
Sbjct: 78 RGDPAVDAV--LLTERDVIDQLREFAAAGFPVELAAEPTRCGSCNG-----PVERADSPE 130
Query: 473 AAKGFQRIPDCLFD---KNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
G PD + D W+C DC Q +W+G + + + +V
Sbjct: 131 VGGGPADRPDYVPDDVGAERPGWRCADCGQWFWKGGHWDDVAARIDEV 178
>gi|308501869|ref|XP_003113119.1| CRE-MUT-7 protein [Caenorhabditis remanei]
gi|308265420|gb|EFP09373.1| CRE-MUT-7 protein [Caenorhabditis remanei]
Length = 943
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 29/185 (15%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
VG D+EWKP N +++++QL + D+ L+ +P E
Sbjct: 447 VGFDSEWKPSNLTSINSSKIAIIQLYFK---------DKVYLVDCVQLEEKRLPDERWQE 497
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
++LF S ++ +GF + DL + I + L I SI N K+L
Sbjct: 498 FARQLFGSKNLKIIGFDMRNDLDAI----------IALPALRETLAIDSIQNCFDLKRLA 547
Query: 155 RK----------LPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
L ++T LA++ + LL +L K QCS+W +RPL + Q YAA+DA
Sbjct: 548 ENICEIDMEILDLKRKTFKLADLTQSLLGQTLDKTEQCSNWQSRPLRKNQLLYAALDAVV 607
Query: 205 LIEIF 209
++ F
Sbjct: 608 VVLTF 612
>gi|301095852|ref|XP_002897025.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108454|gb|EEY66506.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRS-HQSNFPRVSLLQLACQPGPRFNP 69
I+ V S + ++ + + L + ++G D E +P S HQ P +LLQ+A +
Sbjct: 24 IYFVASEK--DWYYCSTRLLNAQVMGFDTETRPIWSKHQRRNP-CALLQIAVR------- 73
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
D + VF+LDL + L +F+S ++KLG F QDL L+ ++ C
Sbjct: 74 --DANQKEEVFILDLLHLSAKVYNTTLTNVFLSKTVVKLGQSFYQDLQELAESYPQASC- 130
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
F + +++ N L G P SL + L L+K Q S+W+ RP
Sbjct: 131 --FTVCKGVVEV----NDLSISLAGAHNPL---SLQKLVFFYLHHKLTKTQQMSNWARRP 181
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LT Q +YAA DA LI +++ +++ ++ +
Sbjct: 182 LTPSQLHYAAADALVLIHLYDELLMRIQKQRTT 214
>gi|17554336|ref|NP_499105.1| Protein MUT-7 [Caenorhabditis elegans]
gi|466063|sp|P34607.1|MUT7_CAEEL RecName: Full=Probable exonuclease mut-7; AltName: Full=Exonuclease
3'-5' domain-containing protein 3 homolog
gi|3881488|emb|CAA80137.1| Protein MUT-7 [Caenorhabditis elegans]
Length = 910
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 39/272 (14%)
Query: 10 KIHLVTSTESPEFTHLARALSQSS------LVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
+IH+V TES E +L + S VG D+EWKP + +++++QL +
Sbjct: 403 QIHMV-KTES-EMNYLCSEIKSLSDEPAPVYVGFDSEWKPSNLTAVHDSKIAIIQLFFK- 459
Query: 64 GPRFNPESDESNASVVFLLD---LSSIPLPSIW--ELLKELFVSPDILKLGFKFKQDLIY 118
+ V+L+D L + W + LF + +GF + DL
Sbjct: 460 -------------NCVWLVDCVELEKANMADDWWQKFASRLFGDSPVKVVGFDMRNDLDA 506
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLS 177
++ T + + + + D+ + ++ + +LPK+T LA++ LL + L
Sbjct: 507 MA-TIPALKSSMKIEDTKNAFDLKRLAENVCDIDMEILELPKKTFKLADLTHYLLGLELD 565
Query: 178 KELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLG 237
K QCS+W RPL ++Q YAA+DA ++E F V +K + SN+
Sbjct: 566 KTEQCSNWQCRPLRKKQIVYAALDAVVVVETFKKILSIVEEKNKDADIEKIVRESNV--- 622
Query: 238 LKGILEKPDIGNKTVR----FKLCEALDIIRA 265
+ K D G+K+ R E DI+R+
Sbjct: 623 ---MAPKKDKGHKSYRKLKTIPWLELYDILRS 651
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATP--------------RSKKPEPRELIDQTSKEKRVL 403
K + D M+ G K+LR VGID P R R +I SK L
Sbjct: 666 KVIVDTMLIGFGKNLRRVGIDVILPKDVSDFRKYLKEIERVGGEHLRHIITVPSKSYEAL 725
Query: 404 LTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRF 460
K+ Y I I + ++ QL+E + F + I + + RCT+CN R
Sbjct: 726 -----KMDYDNYTI--AIPELNNMSPVDQLIEFFDLFNVDIRPEDVYPRCTECNSRL 775
>gi|225556093|gb|EEH04383.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 963
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 31/219 (14%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S Q + VS++QLA +
Sbjct: 729 KEITVHYCTSLQTME--RVAKLFLSETIVGLDVEWKAQASAQDSLVDNVSVIQLASK--- 783
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSS 121
+F L L + P S+ L LK + SPDI+K+G + D
Sbjct: 784 ---------ERIAIFHLALFN-PANSLQHLLSPTLKRILESPDIVKVGVAIRAD------ 827
Query: 122 TFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--E 179
C++ R +++ ++ + H + + K +LA +E L + L K E
Sbjct: 828 --CTRLYKFLGIRTNNICEVSRLHKVVKHHLNPKLIDKRLVNLAQQVEEHLGLPLDKDPE 885
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
++C WS + L Q Y A D + +++F++ + K Q
Sbjct: 886 IRCGGWSKK-LNYRQVQYVATDPYAALQLFHVLEAKRLQ 923
>gi|389843431|ref|YP_006345511.1| hypothetical protein Theba_0545 [Mesotoga prima MesG1.Ag.4.2]
gi|387858177|gb|AFK06268.1| hypothetical protein Theba_0545 [Mesotoga prima MesG1.Ag.4.2]
Length = 158
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL + + LA+ LR +G D R I ++ + + V LT+ K +
Sbjct: 2 RFLVEEPLTKLARKLRLMGFDTEIC------SRNEIGKSFENRDVFLTKSKKAMEIAIKF 55
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y +KS QL VI+ FQ+ + + +SRC+KCNG EEA + K
Sbjct: 56 GIRSYLIKSENWRSQLKSVIQRFQIGLDDVHFLSRCSKCNGLL-------EEA--SLKDV 106
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
+PD + + ++C C QLYW G+
Sbjct: 107 AMVPDYVVLTAERLYKCTRCGQLYWNGSH 135
>gi|379706505|ref|YP_005261710.1| hypothetical protein NOCYR_0245 [Nocardia cyriacigeorgica GUH-2]
gi|374844004|emb|CCF61066.1| conserved protein of unknown function [Nocardia cyriacigeorgica
GUH-2]
Length = 260
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL DV + GLA+ +R +G+D + EL ++ E R+LLTRD LL + +
Sbjct: 97 PRFLVDVNLGGLARLMRLMGLDIRC--EFAADDAELARISAAEHRILLTRDRGLLARR-I 153
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL--MSRCTKCNGRFIQKPLSTEEAVEAA 474
+ + ++ V++ Q++EVI L D+L ++RC +C G L+ + E A
Sbjct: 154 VTHGVF-VRADRPEDQIVEVITRLDLA---DRLAPLTRCVRCGG-----LLAEVDKSEVA 204
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
Q + +D F QC C ++YW G
Sbjct: 205 DRLQPLTLRYYDT---FRQCRGCGRVYWAGAH 233
>gi|88811143|ref|ZP_01126399.1| hypothetical protein NB231_10083 [Nitrococcus mobilis Nb-231]
gi|88791682|gb|EAR22793.1| hypothetical protein NB231_10083 [Nitrococcus mobilis Nb-231]
Length = 187
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 28/165 (16%)
Query: 343 GPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRV 402
GPP D S G P+FLCD M+ L + LR G D + + + R L+ E+R
Sbjct: 18 GPPTSDSSEG----PRFLCDRMLIRLCRWLRAAGYDTSLAGERTSDHR-LLTTAVVEQRY 72
Query: 403 LLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL---MSRCTKCNGR 459
LLTRD KLL H+ ++ R++++ Q E+ + ++S D L SRC CN
Sbjct: 73 LLTRDRKLLEHRG-AAGRVIRLQAVRPAGQAAELAQ----RLSLDWLHAPFSRCLLCNA- 126
Query: 460 FIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEG 504
PL + A G + F +C C + YW+G
Sbjct: 127 ----PLHVDSGHGAPPG----------SHGPFRRCPSCARRYWDG 157
>gi|171317387|ref|ZP_02906581.1| protein of unknown function DUF82 [Burkholderia ambifaria MEX-5]
gi|171097467|gb|EDT42307.1| protein of unknown function DUF82 [Burkholderia ambifaria MEX-5]
Length = 258
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA+ LR G D + + EL+ ++E R++LTRD +LL+ + ++
Sbjct: 93 RFIADAHLGGLAQLLRLAGFDTCYDNHYRDD--ELVALAAREGRIVLTRDRELLKRRAVV 150
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ + + QL E+ L + C +CN PL +A EAA
Sbjct: 151 RGCYLHAQQ--PDAQLHELFARLDLA-PHMRPFRLCLRCNA-----PLHALDAAEAAP-- 200
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + ++ +F C C +++WEG+ +
Sbjct: 201 -RVPAGVRQRHRRFAACDVCRRVFWEGSHW 229
>gi|289752618|ref|ZP_06511996.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis EAS054]
gi|289693205|gb|EFD60634.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis EAS054]
Length = 197
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +G D T S + L D + E+R+LLTRD LL+ + +
Sbjct: 42 PRFVVDVNLGQLARLLRLLGFD--TRWSSAADDPTLADISLGEQRILLTRDRGLLKRRAI 99
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V S +Q LEV+ L +SRC +CNG +S +E + +
Sbjct: 100 THGLF--VHSQHPEEQALEVLRRLDLN-GRLAPLSRCLRCNGELAA--VSKDEVIGQLEP 154
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
R F +C C ++YW G+ + V+
Sbjct: 155 LTR------RYYESFSRCFGCGRIYWPGSHHARLVR 184
>gi|188590987|ref|YP_001795587.1| hypothetical protein RALTA_A0192 [Cupriavidus taiwanensis LMG
19424]
gi|170937881|emb|CAP62865.1| conserved hypothetical protein, DUF82 [Cupriavidus taiwanensis LMG
19424]
Length = 252
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ E R++LTRD +LL+ + I
Sbjct: 97 RFVADAHLGGLAHLLRMTGFD--TLYDNHFEDSEIERIAVDEGRIVLTRDRELLKRRG-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L QQ+ E+ L S + S C CN PL A++ A
Sbjct: 154 THGCY-VRALKSRQQVREIFARLDLAGSA-RPFSLCLDCNA-----PL---RALDPAGAA 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+PD + ++ F C C +++WEG+ +
Sbjct: 204 GRVPDGVLARHRSFVTCDRCRRVFWEGSHW 233
>gi|297568154|ref|YP_003689498.1| protein of unknown function DUF82 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924069|gb|ADH84879.1| protein of unknown function DUF82 [Desulfurivibrio alkaliphilus
AHT2]
Length = 243
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 345 PPWDLSLGGDGYP------KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSK 398
PP D+++ P +F+ DV V LA+ LR +G DA P + + +
Sbjct: 74 PPVDITIPTCLRPEPFTAVRFIIDVNVAKLARRLRMLGFDALLPADHDDAN---LARLAA 130
Query: 399 EKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG 458
R+LLTRD +LL+ + ++ ++ R +QLLEV+ + L+ SRC CN
Sbjct: 131 AGRILLTRDRRLLKRRQVLFGRLIRATD--PQKQLLEVLNHYGLQ-QRALPFSRCLNCNE 187
Query: 459 RFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
I +P++ E+ + R+ +F C C+Q+YW G+
Sbjct: 188 --ILQPVAKEKII------HRLEPLTKKYYTRFKYCPACDQIYWAGSH 227
>gi|147919032|ref|YP_687241.1| hypothetical protein RRC155 [Methanocella arvoryzae MRE50]
gi|110622637|emb|CAJ37915.1| conserved hypothetical protein [Methanocella arvoryzae MRE50]
Length = 155
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 385 KKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKI 444
++ E R L+D ++ RVLLTRD L+ + QL E+I+ + I
Sbjct: 25 EEDEDRRLVDIALQDGRVLLTRDRGLVERAKKAGAIAILISPDKVTDQLCELIK--HVPI 82
Query: 445 SEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEG 504
+ +M RCT CN + +T E + K + +P+ L ++ +FW C C ++YW G
Sbjct: 83 NTQPVMERCTVCNAGLRR---ATAEDIRRTKHY--VPEHLVEEGKEFWICERCGKIYWMG 137
Query: 505 TQYHNAVQKF--IDVCK 519
+ + N ++ IDVC+
Sbjct: 138 SHWRNIMKTSSEIDVCR 154
>gi|408405778|ref|YP_006863761.1| hypothetical protein Ngar_c31880 [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408366374|gb|AFU60104.1| hypothetical protein Ngar_c31880 [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 171
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P FL D M+ +A+ LR G D T E++ ++ RV+LT D +L +
Sbjct: 6 PSFLADAMLGSVARKLRIFGFD--TLYIAHAHDDEILKMGIEQGRVILTADKELFKRVVK 63
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQL-KISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ V + L+ ++ + + D + SRC+ CNG L E+ E K
Sbjct: 64 AGARGVLVSGASDLEDLVHILSKNGITSVDLDGIGSRCSVCNG------LLEEKKPEQVK 117
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYH--NAVQKFID 516
+PD + + +F+QC CN++YWEG A+ K +D
Sbjct: 118 --NGLPDKVAKMHREFYQCTVCNKVYWEGGHLRRIRALAKSVD 158
>gi|424946353|ref|ZP_18362049.1| hypothetical protein NCGM2209_0963 [Mycobacterium tuberculosis
NCGM2209]
gi|358230868|dbj|GAA44360.1| hypothetical protein NCGM2209_0963 [Mycobacterium tuberculosis
NCGM2209]
Length = 252
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +G D T S + L D + E+R+LLTRD LL+ + +
Sbjct: 97 PRFVVDVNLGQLARLLRLLGFD--TRWSSAADDPTLADISLGEQRILLTRDRGLLKRRAI 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V S +Q LEV+ L +SRC +CNG +S +E + +
Sbjct: 155 THGLF--VHSQHPEEQALEVLRRLDLN-GRLAPLSRCLRCNGEL--AAVSKDEVIGQLEP 209
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
R F +C C ++YW G+ + V+
Sbjct: 210 LTR------RYYESFSRCFGCGRIYWPGSHHARLVR 239
>gi|15839981|ref|NP_335018.1| hypothetical protein MT0608.1 [Mycobacterium tuberculosis CDC1551]
gi|308231593|ref|ZP_07413020.2| hypothetical protein TMAG_02460 [Mycobacterium tuberculosis
SUMu001]
gi|13880123|gb|AAK44832.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|308216583|gb|EFO75982.1| hypothetical protein TMAG_02460 [Mycobacterium tuberculosis
SUMu001]
Length = 236
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +G D T S + L D + E+R+LLTRD LL+ + +
Sbjct: 81 PRFVVDVNLGQLARLLRLLGFD--TRWSSAADDPTLADISLGEQRILLTRDRGLLKRRAI 138
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V S +Q LEV+ L +SRC +CNG +S +E + +
Sbjct: 139 THGLF--VHSQHPEEQALEVLRRLDLN-GRLAPLSRCLRCNGEL--AAVSKDEVIGQLEP 193
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
R F +C C ++YW G+ + V+
Sbjct: 194 LTR------RYYESFSRCFGCGRIYWPGSHHARLVR 223
>gi|340625609|ref|YP_004744061.1| hypothetical protein MCAN_05851 [Mycobacterium canettii CIPT
140010059]
gi|340003799|emb|CCC42925.1| conserved hypothetical protein [Mycobacterium canettii CIPT
140010059]
Length = 252
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +G DA S + L D + E+R+LLTRD LL+ + +
Sbjct: 97 PRFVVDVNLGQLARLLRLLGFDAWW--SSAADDPTLADISLGEQRILLTRDRGLLKRKAI 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V S +Q LEV+ L +SRC +CNG ++ +E + K
Sbjct: 155 THGLF--VHSQHPEEQALEVLRRLDLN-GRLAPLSRCLRCNGEL--AAVAKDEVIGQLKP 209
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
R F +C C ++YW G+ + V+
Sbjct: 210 LTR------RYYESFSRCSGCGRIYWPGSHHARLVR 239
>gi|15607719|ref|NP_215093.1| Conserved hypothetical protein [Mycobacterium tuberculosis H37Rv]
gi|31791761|ref|NP_854254.1| hypothetical protein Mb0594 [Mycobacterium bovis AF2122/97]
gi|121636497|ref|YP_976720.1| hypothetical protein BCG_0624 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660348|ref|YP_001281871.1| hypothetical protein MRA_0586 [Mycobacterium tuberculosis H37Ra]
gi|148821781|ref|YP_001286535.1| hypothetical protein TBFG_10590 [Mycobacterium tuberculosis F11]
gi|224988969|ref|YP_002643656.1| hypothetical protein JTY_0594 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253797513|ref|YP_003030514.1| hypothetical protein TBMG_00586 [Mycobacterium tuberculosis KZN
1435]
gi|254230919|ref|ZP_04924246.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254363537|ref|ZP_04979583.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|254549534|ref|ZP_05139981.1| hypothetical protein Mtube_03575 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289441968|ref|ZP_06431712.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289446132|ref|ZP_06435876.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289568512|ref|ZP_06448739.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289744293|ref|ZP_06503671.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289749076|ref|ZP_06508454.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289756657|ref|ZP_06516035.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289760698|ref|ZP_06520076.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|294996091|ref|ZP_06801782.1| hypothetical protein Mtub2_16725 [Mycobacterium tuberculosis 210]
gi|297633073|ref|ZP_06950853.1| hypothetical protein MtubK4_03065 [Mycobacterium tuberculosis KZN
4207]
gi|297730051|ref|ZP_06959169.1| hypothetical protein MtubKR_03110 [Mycobacterium tuberculosis KZN
R506]
gi|298524066|ref|ZP_07011475.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306781588|ref|ZP_07419925.1| hypothetical protein TMBG_03506 [Mycobacterium tuberculosis
SUMu002]
gi|306787593|ref|ZP_07425915.1| hypothetical protein TMDG_02301 [Mycobacterium tuberculosis
SUMu004]
gi|306794357|ref|ZP_07432659.1| hypothetical protein TMEG_01950 [Mycobacterium tuberculosis
SUMu005]
gi|306796327|ref|ZP_07434629.1| hypothetical protein TMFG_03246 [Mycobacterium tuberculosis
SUMu006]
gi|306802187|ref|ZP_07438855.1| hypothetical protein TMHG_03602 [Mycobacterium tuberculosis
SUMu008]
gi|306806394|ref|ZP_07443062.1| hypothetical protein TMGG_03595 [Mycobacterium tuberculosis
SUMu007]
gi|306966594|ref|ZP_07479255.1| hypothetical protein TMIG_01481 [Mycobacterium tuberculosis
SUMu009]
gi|306970787|ref|ZP_07483448.1| hypothetical protein TMJG_02323 [Mycobacterium tuberculosis
SUMu010]
gi|307083074|ref|ZP_07492187.1| hypothetical protein TMLG_03324 [Mycobacterium tuberculosis
SUMu012]
gi|313657378|ref|ZP_07814258.1| hypothetical protein MtubKV_03100 [Mycobacterium tuberculosis KZN
V2475]
gi|339630648|ref|YP_004722290.1| hypothetical protein MAF_05860 [Mycobacterium africanum GM041182]
gi|375294791|ref|YP_005099058.1| hypothetical protein TBSG_00590 [Mycobacterium tuberculosis KZN
4207]
gi|378770331|ref|YP_005170064.1| hypothetical protein BCGMEX_0595 [Mycobacterium bovis BCG str.
Mexico]
gi|385990071|ref|YP_005908369.1| hypothetical protein [Mycobacterium tuberculosis CCDC5180]
gi|385993669|ref|YP_005911967.1| hypothetical protein [Mycobacterium tuberculosis CCDC5079]
gi|385997354|ref|YP_005915652.1| hypothetical protein MTCTRI2_0588 [Mycobacterium tuberculosis
CTRI-2]
gi|386003611|ref|YP_005921890.1| hypothetical protein MRGA423_03630 [Mycobacterium tuberculosis
RGTB423]
gi|392385296|ref|YP_005306925.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|392431002|ref|YP_006472046.1| hypothetical protein TBXG_000582 [Mycobacterium tuberculosis KZN
605]
gi|397672378|ref|YP_006513913.1| hypothetical protein RVBD_0579 [Mycobacterium tuberculosis H37Rv]
gi|422811515|ref|ZP_16859916.1| hypothetical protein TMMG_03282 [Mycobacterium tuberculosis
CDC1551A]
gi|424803135|ref|ZP_18228566.1| hypothetical protein TBPG_00255 [Mycobacterium tuberculosis W-148]
gi|433625674|ref|YP_007259303.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140060008]
gi|449062590|ref|YP_007429673.1| hypothetical protein K60_006150 [Mycobacterium bovis BCG str. Korea
1168P]
gi|31617348|emb|CAD93456.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121492144|emb|CAL70609.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124599978|gb|EAY58988.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|134149051|gb|EBA41096.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|148504500|gb|ABQ72309.1| hypothetical protein MRA_0586 [Mycobacterium tuberculosis H37Ra]
gi|148720308|gb|ABR04933.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224772082|dbj|BAH24888.1| hypothetical protein JTY_0594 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253319016|gb|ACT23619.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289414887|gb|EFD12127.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289419090|gb|EFD16291.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289542266|gb|EFD45914.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289684821|gb|EFD52309.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289689663|gb|EFD57092.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289708204|gb|EFD72220.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|289712221|gb|EFD76233.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298493860|gb|EFI29154.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308325680|gb|EFP14531.1| hypothetical protein TMBG_03506 [Mycobacterium tuberculosis
SUMu002]
gi|308335677|gb|EFP24528.1| hypothetical protein TMDG_02301 [Mycobacterium tuberculosis
SUMu004]
gi|308337255|gb|EFP26106.1| hypothetical protein TMEG_01950 [Mycobacterium tuberculosis
SUMu005]
gi|308343181|gb|EFP32032.1| hypothetical protein TMFG_03246 [Mycobacterium tuberculosis
SUMu006]
gi|308347047|gb|EFP35898.1| hypothetical protein TMGG_03595 [Mycobacterium tuberculosis
SUMu007]
gi|308350990|gb|EFP39841.1| hypothetical protein TMHG_03602 [Mycobacterium tuberculosis
SUMu008]
gi|308355624|gb|EFP44475.1| hypothetical protein TMIG_01481 [Mycobacterium tuberculosis
SUMu009]
gi|308359579|gb|EFP48430.1| hypothetical protein TMJG_02323 [Mycobacterium tuberculosis
SUMu010]
gi|308367189|gb|EFP56040.1| hypothetical protein TMLG_03324 [Mycobacterium tuberculosis
SUMu012]
gi|323720931|gb|EGB29996.1| hypothetical protein TMMG_03282 [Mycobacterium tuberculosis
CDC1551A]
gi|326902411|gb|EGE49344.1| hypothetical protein TBPG_00255 [Mycobacterium tuberculosis W-148]
gi|328457296|gb|AEB02719.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
gi|339293623|gb|AEJ45734.1| hypothetical protein CCDC5079_0544 [Mycobacterium tuberculosis
CCDC5079]
gi|339297264|gb|AEJ49374.1| hypothetical protein CCDC5180_0537 [Mycobacterium tuberculosis
CCDC5180]
gi|339330004|emb|CCC25658.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
gi|341600513|emb|CCC63183.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau
RDJ]
gi|344218400|gb|AEM99030.1| hypothetical protein MTCTRI2_0588 [Mycobacterium tuberculosis
CTRI-2]
gi|356592652|gb|AET17881.1| Hypothetical protein BCGMEX_0595 [Mycobacterium bovis BCG str.
Mexico]
gi|378543847|emb|CCE36118.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|379026718|dbj|BAL64451.1| hypothetical protein ERDMAN_0636 [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|380724099|gb|AFE11894.1| hypothetical protein MRGA423_03630 [Mycobacterium tuberculosis
RGTB423]
gi|392052411|gb|AFM47969.1| hypothetical protein TBXG_000582 [Mycobacterium tuberculosis KZN
605]
gi|395137283|gb|AFN48442.1| hypothetical protein RVBD_0579 [Mycobacterium tuberculosis H37Rv]
gi|432153280|emb|CCK50500.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140060008]
gi|440580038|emb|CCG10441.1| hypothetical protein MT7199_0592 [Mycobacterium tuberculosis
7199-99]
gi|444894063|emb|CCP43317.1| Conserved hypothetical protein [Mycobacterium tuberculosis H37Rv]
gi|449031098|gb|AGE66525.1| hypothetical protein K60_006150 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 252
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +G D T S + L D + E+R+LLTRD LL+ + +
Sbjct: 97 PRFVVDVNLGQLARLLRLLGFD--TRWSSAADDPTLADISLGEQRILLTRDRGLLKRRAI 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V S +Q LEV+ L +SRC +CNG +S +E + +
Sbjct: 155 THGLF--VHSQHPEEQALEVLRRLDLN-GRLAPLSRCLRCNGEL--AAVSKDEVIGQLEP 209
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
R F +C C ++YW G+ + V+
Sbjct: 210 LTR------RYYESFSRCFGCGRIYWPGSHHARLVR 239
>gi|433640706|ref|YP_007286465.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070008]
gi|432157254|emb|CCK54528.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070008]
Length = 252
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +G DA S + L D + E+R+LLTRD LL+ + +
Sbjct: 97 PRFVVDVNLGQLARLLRLLGFDAWW--SSAADDPTLADISLGEQRILLTRDRGLLKRKAI 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V S +Q LEV+ L +SRC +CNG ++ +E + K
Sbjct: 155 THGLF--VHSQHPEEQALEVLRRLDLN-GRLAPLSRCLRCNGEL--AAVAKDEVIGQLKP 209
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
R F +C C ++YW G+ + V+
Sbjct: 210 LTR------RYYESFSRCSGCGRIYWPGSHHARLVR 239
>gi|410685030|ref|YP_006061037.1| conserved hypothethical protein, DUF82 [Ralstonia solanacearum
CMR15]
gi|299069519|emb|CBJ40788.1| conserved hypothethical protein, DUF82 [Ralstonia solanacearum
CMR15]
Length = 255
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FLCD + A+ LR G D A + E + T E ++L+RD +LL+ + + +
Sbjct: 87 FLCDAHLGATARLLRMAGFDTAYDNNYADATIEALADT--EDWIVLSRDRELLKRRGIRR 144
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
R + Q+ E++ F+L + + SRC +CN +PLS EEA +
Sbjct: 145 GAFIRARE--PQAQMREIVARFRLAEAA-RPFSRCLECNAPL--RPLSAEEAAAS----- 194
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+P + ++ F C C ++YW G+ +
Sbjct: 195 -VPPRVRERQHLFSTCDVCRRVYWPGSHW 222
>gi|307103312|gb|EFN51573.1| hypothetical protein CHLNCDRAFT_140064 [Chlorella variabilis]
Length = 969
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 32/186 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++GLD EW+P S+ P SLLQ+ S + V+L+DL ++
Sbjct: 427 VLGLDLEWQPD-GENSSPP--SLLQI--------------STDAEVWLVDLLALTGREAG 469
Query: 94 ELLKELFV----SPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH 149
+ L V S + KLG D L+ + F LD+++++ H
Sbjct: 470 DALAAAIVPVLSSDRVYKLGCGIASDFRKLARHHPA-----AFSLARGCLDLSTLWRSCH 524
Query: 150 HKQLGRKLPKETK------SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
+Q G++ K SL+ + + +L L K Q SDW RPL+ +Q YAA+DAH
Sbjct: 525 IEQTGKRSTAGYKKRVGEVSLSVLAQSVLGKPLDKSQQVSDWGRRPLSSQQLEYAALDAH 584
Query: 204 CLIEIF 209
+ IF
Sbjct: 585 AAVLIF 590
>gi|433629673|ref|YP_007263301.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070010]
gi|432161266|emb|CCK58603.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070010]
Length = 252
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +G DA S + L D + E+R+LLTRD LL+ + +
Sbjct: 97 PRFVVDVNLGQLARLLRLLGFDAWW--SSAADDPTLADISLGEQRILLTRDRGLLKRKAI 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V S +Q LEV+ L +SRC +CNG ++ +E + K
Sbjct: 155 THGLF--VHSQHPEEQALEVLRRLDLN-GRLAPLSRCLRCNGEL--AAVAKDEVIGQLKP 209
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
R F +C C ++YW G+ + V+
Sbjct: 210 LTR------RYYESFSRCSGCGRIYWPGSHHARLVR 239
>gi|288931210|ref|YP_003435270.1| hypothetical protein Ferp_0827 [Ferroglobus placidus DSM 10642]
gi|288893458|gb|ADC64995.1| protein of unknown function DUF82 [Ferroglobus placidus DSM 10642]
Length = 170
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 352 GGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLL 411
GG+ KF+ D M+ LA LR G D E + RVLLTRD +L
Sbjct: 4 GGEKLNKFIVDRMLGKLATWLRISGYDTLYVGDFNVEDEDKFLLEEHRDRVLLTRDKQLY 63
Query: 412 RHQYLIKNQIYRVKSLLKNQQLLEVIE-AFQLKISEDQLMSRCTKCNGRFIQKPLSTEEA 470
+ + S +QL ++ + ++KI +M RC+ CN ++KP S EEA
Sbjct: 64 EASVKSGRKAILITSDSVEEQLKQMKKLGVEIKI----VMDRCSVCNS-LLRKP-SDEEA 117
Query: 471 VEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
+ K D K + W C C++LYW G+ + N V+
Sbjct: 118 LRVMKREGISED--LRKKYELWYCEKCDKLYWMGSHWRNMVK 157
>gi|170696071|ref|ZP_02887208.1| protein of unknown function DUF82 [Burkholderia graminis C4D1M]
gi|170139063|gb|EDT07254.1| protein of unknown function DUF82 [Burkholderia graminis C4D1M]
Length = 271
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D + P+ R + + E R++LTRD +LL+ + I
Sbjct: 97 RFIADAHLGGLAPLLRLAGFDTLYD-NNFPDAR-IEALAAAEDRIVLTRDRELLKRR-TI 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L +QL EV E L S Q C CN PL E
Sbjct: 154 THGCY-VRTLRPREQLREVFERLDLAGSA-QPFRLCLMCNA-----PLRRIPRDEVG--- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYH 508
R PD + +++ QF C C +++WEGT +
Sbjct: 204 DRAPDGVLERHNQFVTCDVCRRVFWEGTHWQ 234
>gi|406661714|ref|ZP_11069828.1| ribonuclease D [Cecembia lonarensis LW9]
gi|405554465|gb|EKB49550.1| ribonuclease D [Cecembia lonarensis LW9]
Length = 200
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 36/203 (17%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
I LV S + + +A L + SL+G D E +P + + VSLLQLA +
Sbjct: 23 IVLVNSKD--QIKEVALELDRHSLLGFDTETRPSFRKGTQY-YVSLLQLATE-------- 71
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDI 130
V FL+ L+ I +P ++E+ P+++K+G DL L I
Sbjct: 72 ------DVAFLIRLNEIGMPGP---IQEILEDPEVIKIGAAVLDDLRGLRK------VSI 116
Query: 131 GFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
GF+ + + D+ + + +G + N+ +L + +SK Q S+W L
Sbjct: 117 GFEP-QSFFDLNDELKKVGFQNIGVR---------NLAAMVLQMRISKSEQVSNWEAVEL 166
Query: 191 TEEQKNYAAIDAHCLIEIFNIFQ 213
T+ Q+ YAA DA +EI+ Q
Sbjct: 167 TDRQQLYAATDAWVCLEIYKKLQ 189
>gi|118379200|ref|XP_001022767.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89304534|gb|EAS02522.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 722
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 23/135 (17%)
Query: 80 FLLDLSSI-PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+L+D+ I I E L ++F+ DI+K+ + +QD+++L F
Sbjct: 75 YLIDVLGINSKQGINECLSKVFLCKDIIKIFYAGQQDILWLKRDF--------------- 119
Query: 139 LDITSIYNHLHHKQLGRKLPK-ETKSLANI----CKELLDISLSKELQCSDWSNRPLTEE 193
D+ S+ N+ K+ L K + SL + C LD KELQ S+WSNRPL++E
Sbjct: 120 -DL-SVVNYFDVKECASFLKKSDDNSLIQLIDRYCNYKLDKQKKKELQVSEWSNRPLSKE 177
Query: 194 QKNYAAIDAHCLIEI 208
Q +YAA+D+H LI+I
Sbjct: 178 QLDYAALDSHYLIKI 192
>gi|387824213|ref|YP_005823684.1| Ribonuclease D [Francisella cf. novicida 3523]
gi|328675812|gb|AEB28487.1| Ribonuclease D [Francisella cf. novicida 3523]
Length = 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 42/193 (21%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + + +S +S + +D E+ R++ +P + L+Q+A + +
Sbjct: 6 NKQLNDVIEIISNTSQIAVDTEFYWMRTY---YPELCLVQIATE--------------NE 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LK++F + DI K+ D+ + F C++
Sbjct: 49 IFLIDTLKDLDFSK----LKDIFENKDIQKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT++Q
Sbjct: 95 --------NNIFDTQLAAAFLGFQTQSSLKTLLKEILDIEMEKESQFSDWRNRPLTQKQL 146
Query: 196 NYAAIDAHCLIEI 208
NYA D LI++
Sbjct: 147 NYAIKDVEYLIQL 159
>gi|296221953|ref|XP_002756974.1| PREDICTED: Werner syndrome ATP-dependent helicase [Callithrix
jacchus]
Length = 1433
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGEMVGFDMEWPPVY-NKGKLGKVALIQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F D+ ++E ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAIKKAGVGIEGDQWKLLRDF-----DV---KLENFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL KET SL + K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCKETWSLNGLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFVIYRKLEI 229
>gi|357610676|gb|EHJ67090.1| hypothetical protein KGM_03049 [Danaus plexippus]
Length = 839
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 5 YRKPLKIHLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
YR P+ + ++ E F L LS ++ D EWKP S + R++L+Q+
Sbjct: 371 YRLPISEENILIIDTAEKFDELISKLSNCPIISFDCEWKP--SFGAAKSRMALIQIG--- 425
Query: 64 GPRFNPESDESNASVVFLLD---LSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYL 119
V+L+D L++ W K + + +I+KLGF +QDL +
Sbjct: 426 -----------TFDQVYLIDTLILNNKQYMGSWCRFNKYVLDNAEIIKLGFGVEQDLNEM 474
Query: 120 SSTFCSQGCDIGFD--RVEPYLDITSIYNHLHHKQLGRKLPKET----KSLANICKELLD 173
S IG + +V+ + + + G LP + SL+++ +
Sbjct: 475 KSLI------IGLNNIKVKGEGLLDLGLLWKNLVKCGLSLPSNSDNGGNSLSSLVQTCFG 528
Query: 174 ISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+ L K QCS+W RPL Q +YAA+DA L+EI+ Q
Sbjct: 529 LPLEKSEQCSNWELRPLRNTQIHYAALDAFVLLEIYKYLQ 568
>gi|126442026|ref|YP_001060797.1| hypothetical protein BURPS668_3802 [Burkholderia pseudomallei 668]
gi|126221519|gb|ABN85025.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
Length = 251
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQ-TSKEKRVLLTRDAKLLRHQYL 416
+F+ D + GLA+ LR G D P ELI+ ++E R++LTRD +LL+ +
Sbjct: 97 RFIADAHLGGLAQLLRLAGFDTL---YDNHYPDELIETIAAREARIVLTRDRELLKRR-T 152
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
I + Y V++L QL E+ + L S + C CN PL + EAA
Sbjct: 153 ITHGCY-VRALKPQAQLQELFDRLDLAGSA-RPFRLCLSCNA-----PLRRIDPAEAAG- 204
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R P + ++ +F C C +++WEG+ +
Sbjct: 205 --RAPQGVLQRHTRFVTCDVCRRVFWEGSHW 233
>gi|432099984|gb|ELK28878.1| Werner syndrome ATP-dependent helicase [Myotis davidii]
Length = 1398
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 33/192 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P S + RV+L+QL ES + + +
Sbjct: 80 ISMSLSDGDVVGFDMEWPPVYS-KGKLSRVALIQLCV----------SESKCYLFHISSM 128
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K+G + D L F DI +++ ++++T +
Sbjct: 129 SVFP-----QGLKMLLENEAIKKVGVGIEGDQWKLLRDF-----DI---KLKSFVELTDV 175
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDA 202
N + ET SL + K L L K ++CS+W N PLTE QK YAA DA
Sbjct: 176 ANE-------KLSSSETWSLNGLVKHLFGKQLLKDKSIRCSNWKNYPLTEVQKLYAATDA 228
Query: 203 HCLIEIFNIFQV 214
+ I+ Q+
Sbjct: 229 YAGFIIYQKLQI 240
>gi|53720862|ref|YP_109848.1| hypothetical protein BPSL3254 [Burkholderia pseudomallei K96243]
gi|76811351|ref|YP_331449.1| hypothetical protein BURPS1710b_0031 [Burkholderia pseudomallei
1710b]
gi|126453915|ref|YP_001068084.1| hypothetical protein BURPS1106A_3863 [Burkholderia pseudomallei
1106a]
gi|167721626|ref|ZP_02404862.1| hypothetical protein BpseD_21635 [Burkholderia pseudomallei DM98]
gi|167740596|ref|ZP_02413370.1| hypothetical protein Bpse14_21210 [Burkholderia pseudomallei 14]
gi|167817802|ref|ZP_02449482.1| hypothetical protein Bpse9_21878 [Burkholderia pseudomallei 91]
gi|167826196|ref|ZP_02457667.1| hypothetical protein Bpseu9_21166 [Burkholderia pseudomallei 9]
gi|167847712|ref|ZP_02473220.1| hypothetical protein BpseB_20739 [Burkholderia pseudomallei B7210]
gi|167896275|ref|ZP_02483677.1| hypothetical protein Bpse7_21203 [Burkholderia pseudomallei 7894]
gi|167904661|ref|ZP_02491866.1| hypothetical protein BpseN_20595 [Burkholderia pseudomallei NCTC
13177]
gi|167912930|ref|ZP_02500021.1| hypothetical protein Bpse112_20746 [Burkholderia pseudomallei 112]
gi|167920895|ref|ZP_02507986.1| hypothetical protein BpseBC_20276 [Burkholderia pseudomallei
BCC215]
gi|217424085|ref|ZP_03455585.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|237814196|ref|YP_002898647.1| hypothetical protein GBP346_A3990 [Burkholderia pseudomallei
MSHR346]
gi|242317220|ref|ZP_04816236.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254186317|ref|ZP_04892834.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|254261486|ref|ZP_04952540.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|254298838|ref|ZP_04966289.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|386863517|ref|YP_006276466.1| hypothetical protein BP1026B_I3498 [Burkholderia pseudomallei
1026b]
gi|403520515|ref|YP_006654649.1| hypothetical protein BPC006_I3913 [Burkholderia pseudomallei
BPC006]
gi|418394559|ref|ZP_12968680.1| hypothetical protein BP354A_3104 [Burkholderia pseudomallei 354a]
gi|418534643|ref|ZP_13100481.1| hypothetical protein BP1026A_1573 [Burkholderia pseudomallei 1026a]
gi|418542215|ref|ZP_13107661.1| hypothetical protein BP1258A_2601 [Burkholderia pseudomallei 1258a]
gi|418548738|ref|ZP_13113839.1| hypothetical protein BP1258B_2968 [Burkholderia pseudomallei 1258b]
gi|418554682|ref|ZP_13119453.1| hypothetical protein BP354E_2523 [Burkholderia pseudomallei 354e]
gi|52211276|emb|CAH37265.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|76580804|gb|ABA50279.1| Protein of unknown function family [Burkholderia pseudomallei
1710b]
gi|126227557|gb|ABN91097.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|157808612|gb|EDO85782.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|157934002|gb|EDO89672.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|217393148|gb|EEC33170.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|237506581|gb|ACQ98899.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
gi|242140459|gb|EES26861.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|254220175|gb|EET09559.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|385356095|gb|EIF62234.1| hypothetical protein BP1258A_2601 [Burkholderia pseudomallei 1258a]
gi|385357216|gb|EIF63285.1| hypothetical protein BP1258B_2968 [Burkholderia pseudomallei 1258b]
gi|385358764|gb|EIF64747.1| hypothetical protein BP1026A_1573 [Burkholderia pseudomallei 1026a]
gi|385369865|gb|EIF75156.1| hypothetical protein BP354E_2523 [Burkholderia pseudomallei 354e]
gi|385374873|gb|EIF79687.1| hypothetical protein BP354A_3104 [Burkholderia pseudomallei 354a]
gi|385660645|gb|AFI68068.1| hypothetical protein BP1026B_I3498 [Burkholderia pseudomallei
1026b]
gi|403076157|gb|AFR17737.1| hypothetical protein BPC006_I3913 [Burkholderia pseudomallei
BPC006]
Length = 251
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQ-TSKEKRVLLTRDAKLLRHQYL 416
+F+ D + GLA+ LR G D P ELI+ ++E R++LTRD +LL+ +
Sbjct: 97 RFIADAHLGGLAQLLRLAGFDTL---YDNHYPDELIETIAAREARIVLTRDRELLKRR-T 152
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
I + Y V++L QL E+ + L S + C CN PL + EAA
Sbjct: 153 ITHGCY-VRALKPQAQLQELFDRLDLAGSA-RPFRLCLSCNA-----PLRRIDPAEAAG- 204
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R P + ++ +F C C +++WEG+ +
Sbjct: 205 --RAPQGVLQRHTRFVTCDVCRRVFWEGSHW 233
>gi|392408544|ref|YP_006445151.1| hypothetical protein Desti_0141 [Desulfomonile tiedjei DSM 6799]
gi|390621680|gb|AFM22887.1| hypothetical protein Desti_0141 [Desulfomonile tiedjei DSM 6799]
Length = 165
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 25/148 (16%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F D M+ LAK LR +G DA P K + R + K L
Sbjct: 26 FDLDGMLGSLAKWLRILGFDARFPCKKVAQDRYFVTTNRK-----------------LKN 68
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
Q+ +V++ +QL ++++ + + + +SRC CN P+ E A KG
Sbjct: 69 PQVIKVRNASPIEQLKQILDQTGIVPNSNLFLSRCLSCN-----VPVR-EIAKHRIKG-- 120
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
R+PD +F +N F +C C +LYWEGT
Sbjct: 121 RVPDSVFSRNSIFHECPSCGKLYWEGTH 148
>gi|134281465|ref|ZP_01768173.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|226193109|ref|ZP_03788719.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|254194680|ref|ZP_04901111.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|134247132|gb|EBA47218.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|169651430|gb|EDS84123.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|225934709|gb|EEH30686.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
Length = 248
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQ-TSKEKRVLLTRDAKLLRHQYL 416
+F+ D + GLA+ LR G D P ELI+ ++E R++LTRD +LL+ +
Sbjct: 94 RFIADAHLGGLAQLLRLAGFDTLY---DNHYPDELIETIAAREARIVLTRDRELLKRR-T 149
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
I + Y V++L QL E+ + L S + C CN PL + EAA
Sbjct: 150 ITHGCY-VRALKPQAQLQELFDRLDLAGSA-RPFRLCLSCNA-----PLRRIDPAEAAG- 201
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R P + ++ +F C C +++WEG+ +
Sbjct: 202 --RAPQGVLQRHTRFVTCDVCRRVFWEGSHW 230
>gi|291386094|ref|XP_002709593.1| PREDICTED: Werner syndrome protein [Oryctolagus cuniculus]
Length = 1416
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + + RV+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPVYT-KGKSSRVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAIKKAGIGIEGDQWKLLRDF-----DI---KLKSFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K LL L K ++CS+WSN PLTE+QK YAA D
Sbjct: 165 ANE--------KLKCAETWSLNGLVKHLLGKQLLKDKSIRCSNWSNFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ + I+ ++
Sbjct: 217 AYAGLIIYRKLEI 229
>gi|374854637|dbj|BAL57514.1| hypothetical conserved protein [uncultured Chloroflexi bacterium]
Length = 243
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 14/162 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + L HLR +G+DA + +EL+ + E R+LL+RD +LL H+ L
Sbjct: 89 RFILDNHLGRLTAHLRMLGLDALY--HNDFQDKELLARALSENRILLSRDRRLLMHKTLQ 146
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ + + S +QL +V++ + L + + RC +CN +P++ E ++
Sbjct: 147 QGCL--LYSTDPQEQLRQVVQRYHL-LHWIRPFQRCMRCNHPL--EPIAKEAILDRLLPL 201
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCK 519
R+ +F C C+Q+YW+G+ Y +++FI +
Sbjct: 202 TRL------YYNEFAHCPACDQIYWKGSHY-ERMEEFIRALR 236
>gi|448488712|ref|ZP_21607386.1| hypothetical protein C463_02056 [Halorubrum californiensis DSM
19288]
gi|445695660|gb|ELZ47761.1| hypothetical protein C463_02056 [Halorubrum californiensis DSM
19288]
Length = 178
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQY 415
P L DVM LA +LR G DAA + E + L + + E RVLLTRD +L
Sbjct: 18 PPVLLDVMCGKLATYLRICGYDAAYALDRGIEADDRLREVAAAEGRVLLTRDRELADSAP 77
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQ-----LKISEDQLMSRCTKCNGRFIQKPLSTEEA 470
I V LL + +++ + F ++I+++ +RC CNG +++ S E
Sbjct: 78 RCDPAIDAV--LLTERDVIDQLREFAGAGYTVEIADEP--TRCGSCNG-PVERSDSPEVG 132
Query: 471 VEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
A + +PD + + W+C +C Q +W+G + + +
Sbjct: 133 ASPADRPEYVPDDVGAER-PGWRCTECGQWFWKGGHWDDVAARL 175
>gi|118431768|ref|NP_148439.2| hypothetical protein APE_2177.1 [Aeropyrum pernix K1]
gi|116063090|dbj|BAA81188.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 171
Score = 60.1 bits (144), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ 414
G +F+ D M+ LAK LR +G D T S+ +++ R+++TRD L
Sbjct: 10 GEARFIVDSMLGSLAKWLRLMGYD--TLYSRTYSDWQILRIAKSSGRIIVTRDRWLHSKA 67
Query: 415 YLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
+ + ++SL ++L E+ L + + SRC CNG + +P+ +EAV
Sbjct: 68 RKMGLKSIYIESLSTEERLAELSAKAGLDLRLEPERSRCPICNG--VLEPVD-KEAVR-- 122
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLN 521
R+P+ + +F+ C C ++YWEG + N + + KL+
Sbjct: 123 ---DRVPEATYRVVDKFYVCTRCGKVYWEGAHWRNMRKTLEEAIKLS 166
>gi|406952885|gb|EKD82341.1| hypothetical protein ACD_39C01351G0002 [uncultured bacterium]
Length = 248
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + LA +R +G+D ELI ++VLL+RD +L+ + +
Sbjct: 97 QFIADCHLGKLAGKMRLLGLDVEF--RNNISDAELIAAVVNNRKVLLSRDRRLMMRKVID 154
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL--MSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ Y V+S +Q+ EVI F L QL +RC +CNG E V+ A
Sbjct: 155 RG--YLVRSQNPEEQVAEVIRRFDLA---SQLCPFTRCARCNG--------ILERVDKAS 201
Query: 476 GFQRI---PDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
+ FD F+QC C Q+YW G+ + +A++ FI
Sbjct: 202 VLHLLEPKTKLYFD---DFFQCQACQQVYWRGSHF-SAIENFI 240
>gi|381150262|ref|ZP_09862131.1| hypothetical protein Metal_0248 [Methylomicrobium album BG8]
gi|380882234|gb|EIC28111.1| hypothetical protein Metal_0248 [Methylomicrobium album BG8]
Length = 257
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F+ DV + L + LR G D T + + E++ + + +R++LTRD ++L + +
Sbjct: 110 FIVDVNLGKLTRLLRLFGFD--TLFADALDDGEIVAASVERQRIILTRDRRMLYAKAVTH 167
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
Y V+++ QL EV++ F L ++ + SRCT CNG + +P+ ++ +
Sbjct: 168 G--YWVRAVKPLDQLAEVVKRFDLA-NQLKPFSRCTACNG--LIEPVEKRAVMDLLEPKT 222
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
R +F++C C ++YWEG+ + Q+F +
Sbjct: 223 R------RYYERFYRCPACRKVYWEGSHIDHIRQRFAE 254
>gi|320165604|gb|EFW42503.1| hypothetical protein CAOG_07346 [Capsaspora owczarzaki ATCC 30864]
Length = 1153
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 46/213 (21%)
Query: 32 SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
++VG+D EW+P + +LLQLA + L+D +
Sbjct: 692 GTVVGMDTEWRPTVMNSKGSSATALLQLATR--------------DRTILIDTCVLRGAV 737
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYL----------SSTFCSQGCDIG---------- 131
+ + + LF + K+G+ D+ L SS + G
Sbjct: 738 LGQFVDRLFSDAAVTKIGYAMTGDMSALQMSCTPDPPPSSATGTAGASGSLPAKIRSARK 797
Query: 132 -------FDRVEPYLDITSIYNHLHH-KQLGRKLPKETKSLANICKELLDISLSKELQCS 183
F + +D+ + +H Q G P LA + + +L +L K Q S
Sbjct: 798 KEPRGHHFPAIRSLIDLAQLTSHAGVVAQFGVIAP----GLAGLVRAVLKKTLDKRQQMS 853
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
DW RPL Q +YAA+DA CL+++ ++ +
Sbjct: 854 DWERRPLRPAQVHYAALDAFCLLKLHDLMDAAM 886
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL D + L + LR VGID + E + + ++ R+LL H +
Sbjct: 960 RFLADSSLARLCRRLRGVGIDCEVYVDRDSE--GFLRASRQQGRILLG-------HGQMF 1010
Query: 418 KN--------QIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG-----RFIQKP 464
+N + +V + QL++V+ F++ + ++ ++SRC CN R +
Sbjct: 1011 RNAAKKCQPGRALQVTTDKPRVQLMQVLRHFRVDVRKEDVLSRCQLCNSVGWIPRTLDAL 1070
Query: 465 LSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
L + KG + D +F +C C+++YWEG + +++
Sbjct: 1071 LVSGFTFPGKKGDKLT--AARDALTEFRECGGCHKIYWEGQGFFRVLRRM 1118
>gi|390574902|ref|ZP_10255012.1| hypothetical protein WQE_40694 [Burkholderia terrae BS001]
gi|389933143|gb|EIM95161.1| hypothetical protein WQE_40694 [Burkholderia terrae BS001]
Length = 251
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA+ LR G D E I S E R++LTRD +LL+ + +I
Sbjct: 97 RFVADAHLGGLAQLLRLAGFDTLYDNHYADSHIESI--ASDENRIVLTRDRELLKRR-MI 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L QL E+ + L S + C CN + ++ +EA+
Sbjct: 154 THGCY-VRTLKPEAQLREIFDRLDLAGSA-RPFRLCLTCNAPL--RRIAKDEAI------ 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R P+ + +++ QF C C +++WEGT +
Sbjct: 204 GRAPEGVLERHAQFVTCDVCRRVFWEGTHW 233
>gi|156740864|ref|YP_001430993.1| hypothetical protein Rcas_0859 [Roseiflexus castenholzii DSM 13941]
gi|156232192|gb|ABU56975.1| protein of unknown function DUF82 [Roseiflexus castenholzii DSM
13941]
Length = 267
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + LA +LR +G D EL +E+R+LLTRD LL+ +I
Sbjct: 102 RFVLDTHLGRLAAYLRMLGYDCLY--RNDAHDAELARLAHEERRILLTRDLGLLKRSIVI 159
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
V+ ++ +Q++EV+ F L + + RC +CN + P+S E +
Sbjct: 160 HGAF--VREVIPLRQIVEVMRRFNLTPAP-TVFQRCMRCNS--LTTPVSKAEIDHLLEPK 214
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R FD F +C C ++YW+G+ Y
Sbjct: 215 TR---QYFDT---FRRCTACGKIYWQGSHY 238
>gi|429216810|ref|YP_007174800.1| hypothetical protein Calag_0594 [Caldisphaera lagunensis DSM 15908]
gi|429133339|gb|AFZ70351.1| hypothetical protein Calag_0594 [Caldisphaera lagunensis DSM 15908]
Length = 168
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
K++ D M+ L + LR +G D R ++I+ K KR+++TRD L +
Sbjct: 3 KYIADAMLGTLTRWLRILGYDIIYSRDYSDG--QIINIALKTKRMIITRDRGLYHKAKKL 60
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y ++S + L E+ +++ D SRC +CN + I+ ++ + +
Sbjct: 61 NIDSYLIESTDIVKILSELYSKKIIELELDPAKSRCPQCNEKLIK--VTDKNLIR----- 113
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLN 521
R+P F+ C C Q+YWEG + N +++ I+ K+N
Sbjct: 114 NRVPPGALKTYNTFYLCKKCGQVYWEGGHWKN-IRRIINEAKIN 156
>gi|339482122|ref|YP_004693908.1| hypothetical protein Nit79A3_0630 [Nitrosomonas sp. Is79A3]
gi|338804267|gb|AEJ00509.1| protein of unknown function DUF82 [Nitrosomonas sp. Is79A3]
Length = 248
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P F+ D + LA++LR +G D I S+++R +LTRD LL Q
Sbjct: 96 PVFVVDANLGKLARYLRLLGFDCLYRNDFGDAAVATI--ASEQQRTVLTRDRSLL--QRS 151
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
I Y V++ + Q EV++ F L + ++RCT CNG+ A G
Sbjct: 152 IITHGYFVRADIPKIQTREVLKRFNL-YPLIKPLTRCTHCNGKL------------AETG 198
Query: 477 FQRIPDCLFDKNLQFWQ----CMDCNQLYWEGTQY 507
Q+I CL ++++ C +C Q+YW+G Y
Sbjct: 199 KQQIEHCLKPLTRKYYEEFLICPECGQIYWQGGHY 233
>gi|145344201|ref|XP_001416625.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576851|gb|ABO94918.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 614
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 46/204 (22%)
Query: 27 RALSQSSLVGLDAEWKP---QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD 83
R L+ +G+D EW + + + + +V+ LQLA + G V +LD
Sbjct: 407 RYLANKKDIGIDTEWGAAVGEDADKEDTSQVATLQLASEDG--------------VAILD 452
Query: 84 L----SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
L S P ++ + +F +LKLGF ++DL L+ C F V
Sbjct: 453 LPVLVQSCP-EALEATIGRMFQDDKVLKLGFAVQEDLRRLAK--CHPA---SFGNVRNVA 506
Query: 140 DITSIYNHLHHKQLGRKLPKETK----------------SLANICKELLDISLSKELQCS 183
D+ S++ K ++ KET+ L+ + +L L K ++ S
Sbjct: 507 DLQSLWKLAVSKA---RMTKETRDFPWATDEELSRYQPVGLSTMVAAVLGKPLDKTMRMS 563
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIE 207
DWS RPLT +Q+ YAA+DA L+E
Sbjct: 564 DWSKRPLTAQQRVYAALDAWTLVE 587
>gi|317051081|ref|YP_004112197.1| 3'-5' exonuclease [Desulfurispirillum indicum S5]
gi|316946165|gb|ADU65641.1| 3'-5' exonuclease [Desulfurispirillum indicum S5]
Length = 213
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 77/176 (43%), Gaps = 37/176 (21%)
Query: 28 ALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
AL Q ++G D E +P R Q P SL+QLA + V+L +S
Sbjct: 46 ALQQCPVLGFDTETRPTFRKGQFFLP--SLIQLATH--------------NHVYLFQISR 89
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
LP+ L E+F S I+K+G D+ L FD + ++DI +
Sbjct: 90 FNLPAG---LLEIFSSQHIVKVGAGLNYDVKQLQQI-------AAFDE-QSFVDIAHLAT 138
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
L KQ G L +C L LSK+ +CSDWS + L+ EQ YAA DA
Sbjct: 139 RLGIKQTG---------LRTLCALLFGKRLSKKARCSDWSRKHLSAEQIKYAAADA 185
>gi|448531077|ref|ZP_21620911.1| hypothetical protein C467_03816 [Halorubrum hochstenium ATCC
700873]
gi|445707517|gb|ELZ59371.1| hypothetical protein C467_03816 [Halorubrum hochstenium ATCC
700873]
Length = 189
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQY 415
P L DVM LA +LR G DAA + E + L+ + E RVL+TRD L
Sbjct: 20 PPVLLDVMCGKLATYLRLCGYDAAYALDRGTEADDRLLALAAAEDRVLITRDRDLADRAP 79
Query: 416 LIKNQIYRVKSLLKNQQLLEVI---EAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
+ +LL + +L+ + +A +I SRC CNG +++ STE +
Sbjct: 80 DADPAVD--AALLTERDVLDQLRELDAAGFRIELAAEPSRCGSCNGP-VERVASTEAGAD 136
Query: 473 AAKGFQRI-----PDCLFDK---NLQFWQCMDCNQLYWEGTQYHNAVQKF 514
PD + D + W+C+DC Q +W+G + + +
Sbjct: 137 VDDTVDAAADADRPDYVPDDVGMDRPGWRCVDCGQWFWKGGHWDDVAARI 186
>gi|226943801|ref|YP_002798874.1| hypothetical protein Avin_16850 [Azotobacter vinelandii DJ]
gi|226718728|gb|ACO77899.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 254
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E R++ ++++R++L+RD +LL+ + ++
Sbjct: 97 RFIADAHLGGLASLLRMCGFD--TLYDNHYEDRQIAALAAEQRRIVLSRDRELLKRR-IV 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y + +L QL E+ E L S + SRC CN PL E VE A+
Sbjct: 154 THGCY-LHALKPALQLRELFERLDLAGSA-RPFSRCLHCN-----LPLH-EVTVEQAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
R+P + +F+ C C +LYWEG+ + +
Sbjct: 204 PRLPPRIAALYSRFFGCDACQRLYWEGSHWRS 235
>gi|13541293|ref|NP_110981.1| hypothetical protein TVN0462 [Thermoplasma volcanium GSS1]
gi|14324676|dbj|BAB59603.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 157
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 354 DGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
DG K D M+ LA+ +R +G D P + E+I+ + E R+L+T+D +L
Sbjct: 9 DGKIKLTVDQMLGKLARWIRLMGYDVYYP-AGNVSDNEIIEVSKNEGRILITKDYELYSR 67
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
L IY + S + + QL + + F+ + E+ RC CNG+ ++ S
Sbjct: 68 YPL---SIYELYSNI-DDQLYDFVFHFRKRTEEE--FKRCPVCNGKLVKVYAS------- 114
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
P L ++L ++C C +LYW+GT Y +K
Sbjct: 115 -------PHVLNHRDL--YRCEFCGKLYWKGTHYKKIYRKL 146
>gi|305663630|ref|YP_003859918.1| hypothetical protein [Ignisphaera aggregans DSM 17230]
gi|304378199|gb|ADM28038.1| protein of unknown function DUF82 [Ignisphaera aggregans DSM 17230]
Length = 180
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ D M+ +A+ LR +G D R+ + +L+ E R++LTRD L R
Sbjct: 5 PRFIVDSMLGHVARWLRMLGYDTVYYRN--IDDWKLLRIAKNEDRIILTRDLGLFRRAR- 61
Query: 417 IKNQIYRV----KSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
KN + + S+ K LL + +L+ E+ +RC +CNG T VE
Sbjct: 62 -KNGLRALFIEDPSIEKILALLSIRYGIRLEFDEND--TRCPECNGIL----RCTSSIVE 114
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ ++ + K +FW C C ++YW+GT +
Sbjct: 115 VS---SKVSKDIVLKYKKFWICQSCGKVYWQGTHW 146
>gi|346466965|gb|AEO33327.1| hypothetical protein [Amblyomma maculatum]
Length = 182
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 79 VFLLDLSSIPL---PSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDR 134
VF+LD+ + S W+ L E+ S ILKLG+ +DL ++ T +
Sbjct: 22 VFILDMLRLVAELQSSDWDKLFSEILSSHKILKLGYGIAEDLRLVAETVKQPNA-----K 76
Query: 135 VEPYLDITSIYNHLHHKQLGRKLP----KETKSLANICKELLDISLSKELQCSDWSNRPL 190
V +D+ + L P ++ K LA + L + L+K +CS+W NRPL
Sbjct: 77 VSRVVDLCNFAQKLRQDYPRVIKPVDPRRKCKGLAELTYSTLGLPLNKSERCSNWENRPL 136
Query: 191 TEEQKNYAAIDAHCLIEIF 209
Q YAA+DA+CL++I+
Sbjct: 137 RPSQTVYAALDAYCLLQIY 155
>gi|307170679|gb|EFN62847.1| Exonuclease 3'-5' domain-like-containing protein 2 [Camponotus
floridanus]
Length = 622
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 94/216 (43%), Gaps = 45/216 (20%)
Query: 10 KIHLVTSTESPEFT-HLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
KI L S E ++ R ++G D EW + VSLLQLA G
Sbjct: 85 KIILADSPEKCDYAVQRIRCNLSDGVLGFDCEWVKEGP-------VSLLQLATYNG---- 133
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
VV L L I + LKEL + ILK+G +D + + GC
Sbjct: 134 ---------VVALFRLGKIGY--VPPKLKELLATKHILKVGVASFEDGQKIVKDY---GC 179
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWS 186
RV LD+ S+ +LH LP KSLA + E L+I + K E++C DW
Sbjct: 180 -----RVSGTLDLRSLAENLH-------LPSR-KSLAAMSLEYLNIEMDKIIEVRCGDWD 226
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
L++EQ YAA DA + I++ K+ QK N+
Sbjct: 227 ASTLSDEQVAYAACDALASVIIYH----KIMQKENA 258
>gi|167969001|ref|ZP_02551278.1| hypothetical protein MtubH3_13622 [Mycobacterium tuberculosis
H37Ra]
Length = 252
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +G D T S + L D + E+R+LLTR+ LL+ + +
Sbjct: 97 PRFVVDVNLGQLARLLRLLGFD--TRWSSAADDPTLADISLGEQRILLTRERGLLKRRAI 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V S +Q LEV+ L +SRC +CNG +S +E + +
Sbjct: 155 THGLF--VHSQHPEEQALEVLRRLDLN-GRLAPLSRCLRCNGEL--AAVSKDEVIGQLEP 209
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
R F +C C ++YW G+ + V+
Sbjct: 210 LTR------RYYESFSRCFGCGRIYWPGSHHARLVR 239
>gi|187925658|ref|YP_001897300.1| hypothetical protein Bphyt_3686 [Burkholderia phytofirmans PsJN]
gi|187716852|gb|ACD18076.1| protein of unknown function DUF82 [Burkholderia phytofirmans PsJN]
Length = 253
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D E + + E+R++LTRD +LL+ + I
Sbjct: 97 RFIADAHLGGLAPLLRLAGFDTLYDNHYPDADIEAL--AAAEQRIVLTRDRELLKRRS-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y +++L +QL EV E L S Q C CN PL E
Sbjct: 154 THGCY-IRTLRPREQLREVFERLDLAGSA-QPFRLCLMCN-----VPLRRIAKEEVGT-- 204
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R PD + +++ QF C C +++WEGT +
Sbjct: 205 -RAPDGVLERHAQFVTCDVCRRVFWEGTHW 233
>gi|409095209|ref|ZP_11215233.1| hypothetical protein TzilA_01030 [Thermococcus zilligii AN1]
Length = 154
Score = 58.9 bits (141), Expect = 6e-06, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D+M+ LA+ LR G D + E++ +E R+LLTRD+ L
Sbjct: 2 RFIADMMLGRLARWLRLYGYDTLYGIE---DDDEIVRIALREGRILLTRDSGLAGRA--- 55
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM---SRCTKCNGRFIQKPLSTEEAVEAA 474
+ RV L N +V E L I +L +RC KCNG + P EE E
Sbjct: 56 EKSGARVFLLSSNSLEEQVRELKSLGIEFKELFPPDARCPKCNGPIRRAP--KEEVRE-- 111
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
++P ++ + +F+ C DC Q+YW G Q+ ++
Sbjct: 112 ----KVPPTVYGRYEEFYICEDCGQIYWPGRQWEEMLK 145
>gi|217970226|ref|YP_002355460.1| hypothetical protein Tmz1t_1812 [Thauera sp. MZ1T]
gi|217507553|gb|ACK54564.1| protein of unknown function DUF82 [Thauera sp. MZ1T]
Length = 261
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 392 LIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMS 451
L+ +E+RV+LTRD +LL+ + + + V +L +Q +E++ L + S
Sbjct: 133 LVATAVRERRVVLTRDRELLKRRDVAEGCF--VHALEPARQAVEILRRLGLA-GHARPFS 189
Query: 452 RCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
RC +CN + V A QR+P + ++ F C C ++YWEG+ +
Sbjct: 190 RCLECNAALHE--------VSPAAVVQRLPPAVRARHTHFSACAGCGRVYWEGSHW 237
>gi|255693419|ref|ZP_05417094.1| 3'-5' exonuclease domain protein [Bacteroides finegoldii DSM 17565]
gi|423302015|ref|ZP_17280038.1| hypothetical protein HMPREF1057_03179 [Bacteroides finegoldii
CL09T03C10]
gi|260620806|gb|EEX43677.1| 3'-5' exonuclease [Bacteroides finegoldii DSM 17565]
gi|408471106|gb|EKJ89638.1| hypothetical protein HMPREF1057_03179 [Bacteroides finegoldii
CL09T03C10]
Length = 214
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +I+++ S E L S++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSETETE--KAVAYLQSRSVIGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +PD++K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTRP-----LVDLLENPDVIKVGLSLKDDFMMLHKRAPFNQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QNC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ Q GN
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGN 196
>gi|350593451|ref|XP_003133429.3| PREDICTED: Werner syndrome ATP-dependent helicase [Sus scrofa]
Length = 1443
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ R++L+QL ES + + +
Sbjct: 69 ISLSLSSGDVVGFDMEWPPVY-NKGKLGRIALIQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G K D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENEAIKKAGVGIKGDQSKLLRDF-----DI---KLKSFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K ++CS+WSN PLTE+QK YAA D
Sbjct: 165 ANE--------KLKCAETWSLNGLVKHLFSKQLLKDKSIRCSNWSNFPLTEDQKLYAATD 216
Query: 202 AHCLIEIF 209
A+ I+
Sbjct: 217 AYAGFIIY 224
>gi|323527643|ref|YP_004229796.1| hypothetical protein BC1001_3322 [Burkholderia sp. CCGE1001]
gi|323384645|gb|ADX56736.1| protein of unknown function DUF82 [Burkholderia sp. CCGE1001]
Length = 265
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D E + + E+R++LTRD +LL+ + I
Sbjct: 97 RFIADAHLGGLAPLLRLAGFDTLYDNHFPDAHIEAL--AAAEERIVLTRDRELLKRRA-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L +QL EV E L S Q C CN PL E
Sbjct: 154 THGCY-VRALRPREQLREVFERLDLAGSA-QPFRLCLMCNA-----PLRRIARDEVG--- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R PD + ++ QF C C +++WEGT +
Sbjct: 204 DRAPDGVLQRHKQFVTCDVCRRVFWEGTHW 233
>gi|345567854|gb|EGX50756.1| hypothetical protein AOL_s00054g842 [Arthrobotrys oligospora ATCC
24927]
Length = 911
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 43/221 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEW------KPQRSHQSNFPRVSLLQLAC 61
P KIH VT + E +++ +G D EW KP + + S++Q+A
Sbjct: 316 PPKIHYVTDVD--EMETVSKLFENDKAIGFDMEWVPNSILKPTVNDRDIRNCASVIQVA- 372
Query: 62 QPGPRFNPESDESNASVVFLLDLSSIPLPS---IWELLKELFVSPDILKLGFKFKQDLIY 118
N V + L+ P + + LK++ P ILK+G K D+
Sbjct: 373 -------------NQERVAIFHLAKFPATTKKFLAPTLKKILEDPSILKMGVSIKGDMTR 419
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ-----LGRKLPKETKSLANICKELLD 173
LS+ + L+++ ++ + + G+ LP SL N+CKE L
Sbjct: 420 LSTLINVNPAGV--------LELSHFHSLVFAAEGNVPAPGKSLP---ASLTNLCKEHLK 468
Query: 174 ISLSK-ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+ L+K +++ S+WS R L ++QK YAA DA+ ++ +
Sbjct: 469 LPLNKGDVRTSNWS-RELNDDQKFYAANDAYASYRVYEAIE 508
>gi|340345858|ref|ZP_08668990.1| DUF82 domain containing protein [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520999|gb|EGP94722.1| DUF82 domain containing protein [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 150
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 14/160 (8%)
Query: 364 MVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYR 423
M+ +A+ LR +G D T + ++LID KEK +++++D +L+ QI
Sbjct: 1 MLGNIARKLRLLGYD--TKYFPDIDDKKLIDTAIKEKIIIISKDKELILRAQKYNLQIIH 58
Query: 424 VKSLLKNQQLLEVIEAFQLK-ISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPD 482
+ + +Q E+I LK + ++RCTKCN S E ++ + ++IP
Sbjct: 59 ITKQKQIEQFFEIINKIHLKNFKINGNVARCTKCN--------SLTEPIDKSNYKEKIPL 110
Query: 483 CLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
+F+ N +W+C C ++YWEGT N +Q F V K+NE
Sbjct: 111 GVFNFNENYWRCKSCEKIYWEGTHIKN-LQVF--VGKINE 147
>gi|193290152|ref|NP_001123262.1| exonuclease 3'-5' domain-like 2 [Nasonia vitripennis]
Length = 605
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 10 KIHLVTSTESPEF-THLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
K+ LV S E ++ R ++G D EW N VSLLQLA G
Sbjct: 61 KVILVDSPEKCDYAVQRIRCNLSDGVLGFDCEW-------VNEEPVSLLQLATHNG---- 109
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V L LS I I LKEL S D+LK+G D ++ + Q
Sbjct: 110 ---------VCALFRLSKIG--HIPPKLKELLSSRDLLKVGVASFDDGRKIAKDYNCQ-- 156
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWS 186
V +D+ + H H LP KSLA +C + LD + K E++CS+W+
Sbjct: 157 ------VVGTVDL-RMLAHRH------SLP-SPKSLAALCVQYLDTEMDKILEVRCSNWN 202
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
LT EQ +YAA DA+ + I++ K+ QK
Sbjct: 203 ADSLTNEQISYAAHDAYAAVLIYHQILQKIVQK 235
>gi|397651107|ref|YP_006491688.1| hypothetical protein PFC_02145 [Pyrococcus furiosus COM1]
gi|393188698|gb|AFN03396.1| hypothetical protein PFC_02145 [Pyrococcus furiosus COM1]
Length = 155
Score = 58.5 bits (140), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 21/160 (13%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D+M+ LA+ LR G D + E++ +E R++LTRD +L R
Sbjct: 2 KFIADMMLGRLARWLRLYGYDTLYGIE---DDNEILRIAEEEGRIILTRDVELYR----- 53
Query: 418 KNQIYRVKSLLKNQQLLE--VIEAFQLKISEDQLM---SRCTKCNGRFIQKPLSTEEAVE 472
+ Q+ ++++L E V + ++ +L +RC KCNG + + EE
Sbjct: 54 QAQVRNLRAILITSNSFEEQVKQLMMERVEFSELFPENARCPKCNG--VIRSAKKEEV-- 109
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
KG ++P+ +++ +F+ C C Q+YW G Q+ ++
Sbjct: 110 --KG--KVPENVYNSYNEFYICTSCGQIYWPGRQWREMLK 145
>gi|341877604|gb|EGT33539.1| CBN-MUT-7 protein [Caenorhabditis brenneri]
Length = 862
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 49/241 (20%)
Query: 28 ALSQS---SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
ALS+S + VG D+EWKP +N L A +V +++L
Sbjct: 426 ALSKSPDQAYVGFDSEWKP-----TNVTSNKQLFFA-------------DKVWLVDVVEL 467
Query: 85 SSIPLPSIW--ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT 142
+ + W + +LF+ +GF + DL + + ++ +L I
Sbjct: 468 GNANVSDDWWQKFAVKLFIDNKFRIIGFDMRNDLDAM----------LTIPALKNFLKIE 517
Query: 143 SIYNHLHHKQLGR----------KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
I N K+L +LPK+T LA++ L+++L K QCS+W RPL +
Sbjct: 518 KINNCFDLKRLAENICDVDMEILELPKKTFKLADLTLHFLNVTLDKTEQCSNWQCRPLRK 577
Query: 193 EQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTV 252
Q YAA+DA +++ F ++ +S + +++SN+ + K + +KTV
Sbjct: 578 NQIIYAALDAVVVVDTFRKIMEITLERDSSIDMANIVNNSNV------LAPKKEKSSKTV 631
Query: 253 R 253
R
Sbjct: 632 R 632
>gi|389852171|ref|YP_006354405.1| hypothetical protein Py04_0729 [Pyrococcus sp. ST04]
gi|388249477|gb|AFK22330.1| hypothetical protein Py04_0729 [Pyrococcus sp. ST04]
Length = 155
Score = 58.5 bits (140), Expect = 8e-06, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLL-RHQYL 416
KF+ D+M+ LA+ LR G D E E++ K+ R++LTRD+ L+ R + L
Sbjct: 2 KFIADMMLGRLARWLRLYGYDTLY---GIKEDEEIVKIARKDGRIILTRDSGLVERAKKL 58
Query: 417 IKNQIYRVKSLLKNQ--QLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
I + + L+ Q QL++ F E+ +RC KCNG ++ V+
Sbjct: 59 GVKAILIMSNSLEEQIRQLMDEGVEFGELFPEN---ARCPKCNGVIVR--------VKKE 107
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P +++ +F+ C +C Q+YW G Q+
Sbjct: 108 DVAGKVPPKVYEAYDEFYMCTNCGQIYWPGRQW 140
>gi|186477626|ref|YP_001859096.1| hypothetical protein Bphy_2878 [Burkholderia phymatum STM815]
gi|184194085|gb|ACC72050.1| protein of unknown function DUF82 [Burkholderia phymatum STM815]
Length = 251
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA+ LR G D E I S E R++LTRD +LL+ + I
Sbjct: 97 RFVADAHLGGLAQLLRLAGFDTLYDNHYADSHIESI--ASDEDRIVLTRDRELLKRRS-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L QL E+ + L S Q C CN + ++ +EA+
Sbjct: 154 THGCY-VRALKPEAQLREMFDRLDLARSA-QPFRLCLTCNAPL--RRIAKDEAI------ 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R PD + +++ QF C C +++WEG+ +
Sbjct: 204 GRAPDGVLERHSQFVTCDVCRRVFWEGSHW 233
>gi|407715026|ref|YP_006835591.1| hypothetical protein BUPH_03677 [Burkholderia phenoliruptrix
BR3459a]
gi|407237210|gb|AFT87409.1| hypothetical protein BUPH_03677 [Burkholderia phenoliruptrix
BR3459a]
Length = 265
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D E + + E+R++LTRD +LL+ + I
Sbjct: 97 RFIADAHLGGLAPLLRLAGFDTLYDNHFPDAHIEAL--AAAEERIVLTRDRELLKRRA-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L +QL EV E L S Q C CN PL E
Sbjct: 154 THGCY-VRALRPREQLREVFERLDLAGSA-QPFRLCLMCNA-----PLRRIGRDEVG--- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R PD + ++ QF C C +++WEGT +
Sbjct: 204 DRAPDGVLQRHKQFVTCDVCRRVFWEGTHW 233
>gi|427428510|ref|ZP_18918551.1| hypothetical protein C882_4262 [Caenispirillum salinarum AK4]
gi|425882243|gb|EKV30925.1| hypothetical protein C882_4262 [Caenispirillum salinarum AK4]
Length = 163
Score = 58.5 bits (140), Expect = 8e-06, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 18/152 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+ LCD M+ GLA+ LR G DA TP +P+ R LI + + + R+ +TRD +L+H+
Sbjct: 13 RLLCDEMLVGLARWLRAAGHDATTPVRGEPDQR-LIARAAVQDRLFVTRDRPILKHR-AA 70
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL---MSRCTKCNGRFIQKPLSTEEAVEAA 474
+ ++S ++Q E+ E +L D L SRC CN + +EA
Sbjct: 71 AGLVVVLESDDLDRQAAELRERLRL----DWLAAPFSRCLVCN-------VPVDEAGPED 119
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
G RIP+ F C +C+++YW G+
Sbjct: 120 VG--RIPEQARALPGPFRVCPECDRVYWPGSH 149
>gi|448624082|ref|ZP_21670155.1| hypothetical protein C438_14056 [Haloferax denitrificans ATCC
35960]
gi|445750049|gb|EMA01488.1| hypothetical protein C438_14056 [Haloferax denitrificans ATCC
35960]
Length = 188
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 37/175 (21%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAA--------------TPRSKKPEPRE--LIDQTSKEKRV 402
L DVM+ LA +LR G DA R + +P + L+ + + E RV
Sbjct: 27 LLLDVMLGKLATYLRMCGYDAEYALDGGDETEDGADGARDARADPGDDGLLARANAEGRV 86
Query: 403 LLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEV--IEAFQLKISEDQLMSRCTKCNGRF 460
LLTRD +L + R L + + + ++ +E+ +S D+ SRC CNGR
Sbjct: 87 LLTRDVRL-------AERAPRSVLLAEREPIAQLRELESVGFAVSLDEEPSRCGVCNGR- 138
Query: 461 IQKPLSTEEAVEAAKGFQRIPDCLFD-KNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
VEA + +PD D +C DC Q++W G+ + + +
Sbjct: 139 ----------VEAVSRGESVPDYAPDPAETALCRCRDCGQVFWRGSHWRDVEARL 183
>gi|430805152|ref|ZP_19432267.1| hypothetical protein D769_02723 [Cupriavidus sp. HMR-1]
gi|429502675|gb|ELA00983.1| hypothetical protein D769_02723 [Cupriavidus sp. HMR-1]
Length = 263
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ S EKR++LTRD +LL+ + I
Sbjct: 97 RFVADAHLGGLAHLLRMTGFD--TLYDNHFEDSEIARIASDEKRIVLTRDRELLKRRG-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V+++ + Q+ E+ L S + S C CN PL +
Sbjct: 154 THGCY-VRAIRSSLQVREIFSRLDLARSA-RPFSLCLDCN-----VPLRRIGKTDVDG-- 204
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P+ +F+++ F C C +++WEG+ +
Sbjct: 205 -RVPEGVFERHEHFVTCPHCQRVFWEGSHW 233
>gi|270307794|ref|YP_003329852.1| hypothetical protein DhcVS_368 [Dehalococcoides sp. VS]
gi|270153686|gb|ACZ61524.1| hypothetical protein DhcVS_368 [Dehalococcoides sp. VS]
Length = 167
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 40/174 (22%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL D V LA +LR +G DA R ++L+ + E R++LTRD LL + L
Sbjct: 8 PRFLVDQNVGKLAVYLRMLGFDAR--RFGSGPDKQLVSEALNEGRIILTRD-HLLAERRL 64
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL---------------MSRCTKCNGRFI 461
+K K LK + F+ +++EDQL SRC +CN +
Sbjct: 65 VK------KGSLK-------VTLFKTEVAEDQLRQLLSDIVFSSFICPFSRCIECN--YP 109
Query: 462 QKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
P+ + E R+P ++ +F +C C +++W+G+ + A+Q+ +
Sbjct: 110 LYPVMKDTLSE------RVPPYVYQNQTEFKECHHCGRIFWKGSHWQ-AMQELL 156
>gi|254183837|ref|ZP_04890428.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|184214369|gb|EDU11412.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
Length = 251
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQ-TSKEKRVLLTRDAKLLRHQYL 416
+F+ D + GLA+ LR G D P +LI+ ++E R++LTRD +LL+ +
Sbjct: 97 RFIADAHLGGLAQLLRLAGFDTL---YDNHYPDKLIETIAAREARIVLTRDRELLKRR-T 152
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
I + Y V++L QL E+ + L S + C CN PL + EAA
Sbjct: 153 ITHGCY-VRALKPQAQLQELFDRLDLAGSA-RPFRLCLSCNA-----PLRRIDPAEAAG- 204
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R P + ++ +F C C +++WEG+ +
Sbjct: 205 --RAPQGVLQRHTRFVTCDVCRRVFWEGSHW 233
>gi|420256032|ref|ZP_14758896.1| hypothetical protein PMI06_09363 [Burkholderia sp. BT03]
gi|398043931|gb|EJL36792.1| hypothetical protein PMI06_09363 [Burkholderia sp. BT03]
Length = 251
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA+ LR G D E I S E R++LTRD +LL+ + I
Sbjct: 97 RFVADAHLGGLAQLLRLAGFDTLYDNHYADSHIESI--ASDENRIVLTRDRELLKRR-TI 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L QL E+ + L S + C CN + ++ +EA+
Sbjct: 154 THGCY-VRTLKPEAQLREIFDRLDLAGSA-RPFRLCLTCNAPL--RRIAKDEAI------ 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R P+ + +++ QF C C +++WEGT +
Sbjct: 204 GRAPEGVLERHAQFVTCDVCRRVFWEGTHW 233
>gi|339324394|ref|YP_004684087.1| hypothetical protein CNE_1c02370 [Cupriavidus necator N-1]
gi|338164551|gb|AEI75606.1| hypothetical protein CNE_1c02370 [Cupriavidus necator N-1]
Length = 252
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + RV+LTRD +LL+ + I
Sbjct: 97 RFVADAHLGGLAHLLRMTGFD--TLYDNHFEDSEIERIAVDQGRVVLTRDRELLKRRG-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V+++ Q+ E+ L S + S C CN PL A++AA
Sbjct: 154 THGCY-VRAIKSQLQVREIFARLDLARSA-RPFSLCLDCNA-----PL---RALDAAGAA 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P+ + +++ F C C +++WEG+ +
Sbjct: 204 GRVPEGVLERHRSFVTCDQCRRVFWEGSHW 233
>gi|313145540|ref|ZP_07807733.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423279805|ref|ZP_17258718.1| hypothetical protein HMPREF1203_02935 [Bacteroides fragilis HMW
610]
gi|424662129|ref|ZP_18099166.1| hypothetical protein HMPREF1205_02515 [Bacteroides fragilis HMW
616]
gi|313134307|gb|EFR51667.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404577918|gb|EKA82654.1| hypothetical protein HMPREF1205_02515 [Bacteroides fragilis HMW
616]
gi|404584793|gb|EKA89437.1| hypothetical protein HMPREF1203_02935 [Bacteroides fragilis HMW
610]
Length = 215
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ TES +A SQ+ ++G+D+E +P + + + +V+LLQ++
Sbjct: 21 PGRIHVI-QTESEAEKAVAYLQSQA-ILGIDSETRPSFT-KGHSHKVALLQIS------- 70
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
SDE +F L+++ + P I EL +P+++K+G K D + L + F
Sbjct: 71 ---SDE--CCFLFRLNMTGLTQPII-----ELLENPEVIKVGLSLKDDFMMLHKRAPFNQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + ++ R + KSL I L +SK + S+W
Sbjct: 121 QAC-------------------IELQEYVRPFGIQDKSLQKIYGILFREKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LT+ QK YAA DA + I+++ Q
Sbjct: 162 EADVLTDAQKQYAATDAWACLNIYHLLQ 189
>gi|91785509|ref|YP_560715.1| hypothetical protein Bxe_A0270 [Burkholderia xenovorans LB400]
gi|91689463|gb|ABE32663.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 251
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D E + + ++R++LTRD +LL+ + I
Sbjct: 97 RFIADAHLGGLAPLLRLAGFDTLYDNHYPDADIEAL--AAAQQRIVLTRDRELLKRRN-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L +QL EV E L S Q C CN PL E
Sbjct: 154 THGCY-VRTLRPREQLREVFERLDLAGSA-QPFRLCLMCN-----VPLRRIPKEEVGT-- 204
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R PD + +++ QF C C +++WEGT +
Sbjct: 205 -RAPDGVLERHAQFVTCDVCRRVFWEGTHW 233
>gi|448409189|ref|ZP_21574571.1| hypothetical protein C475_09579 [Halosimplex carlsbadense 2-9-1]
gi|445673137|gb|ELZ25699.1| hypothetical protein C475_09579 [Halosimplex carlsbadense 2-9-1]
Length = 196
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 28/170 (16%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRD----AK 409
G L D M+ LA +LR G DAA + E + ++ T E RVL+TRD A+
Sbjct: 48 GETALLLDTMLGKLATYLRMCGYDAAYAGERGIEADDDVLALTHTEGRVLVTRDRELAAR 107
Query: 410 LLRHQYLIKNQIYRVKSLLKNQQLLEVIE-AFQLKISEDQLMSRCTKCNGRFIQKPLSTE 468
R Q L ++ +QLLE+ F L+++++ +RC+ CNG PL
Sbjct: 108 AERSQLLSTREV--------TEQLLELRRSGFDLELADEP--ARCSACNG-----PLERV 152
Query: 469 EAVEAAKGFQRIPDCLFDKNLQ-FWQCMDCNQLYWEGTQYHNAVQKFIDV 517
+ E PD + + + W+C +C Q +W+G+ + + D+
Sbjct: 153 DRTEP------TPDYAPETHEETVWRCHNCGQHFWKGSHWADVAGTLDDL 196
>gi|386813938|ref|ZP_10101162.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403435|dbj|GAB64043.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 162
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D M+ LAK LR +G D S + LI + ++ R++L+ D KL+ +
Sbjct: 7 KFIADAMLGRLAKWLRILGYDVVYEPSISDDA--LIARALRDDRIILSMDKKLI-ERISA 63
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
KN +Y +K +QL +VI + + + + +RC CN + L T + K
Sbjct: 64 KNSLY-IKDSNYKEQLKQVITYYNIDYKTN-IFTRCLVCN-----RSLDT---IHKEKIQ 113
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCK 519
++ ++ +F C CN++YW GT N V+K ++ K
Sbjct: 114 DKVFPYVYSIQDKFHICQQCNRIYWAGTHRINIVEKLNEILK 155
>gi|395847404|ref|XP_003796366.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Otolemur garnettii]
Length = 1432
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
+ + LS +VG D EW P + RV+L+QL ES + + +
Sbjct: 68 IGKTLSDGDVVGFDLEWPPV-FRKGKHGRVALIQLCV----------SESKCYLFHISAM 116
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F D+ +++ ++++T +
Sbjct: 117 SVFP-----QGLKMLLENETVKKAGVGIQGDEWKLLRDF-----DV---KLKSFVELTDV 163
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL + K L L K ++CSDWSN PLTE+QK YAA D
Sbjct: 164 AN--------KKLKCIETWSLNGLVKHLFGKQLLKDKSVRCSDWSNYPLTEDQKLYAATD 215
Query: 202 AHCLIEIF 209
A+ + I+
Sbjct: 216 AYAGLIIY 223
>gi|74318176|ref|YP_315916.1| hypothetical protein Tbd_2158 [Thiobacillus denitrificans ATCC
25259]
gi|74057671|gb|AAZ98111.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 264
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR +G D T ++ + R++LTRD +LL+ + +
Sbjct: 109 RFVADAHLGGLAHMLRMLGFD--TLYDNHFHDDAIVAICEHDGRIVLTRDRELLKRRS-V 165
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y + +L QL EV+ L S + +RC CN PL T V+ A
Sbjct: 166 THGCY-IHALKSEAQLREVVARLDLARSA-RPFTRCLHCN-----VPLRT---VDKASVL 215
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
R+P + + F C C ++YW G+ + N + DV
Sbjct: 216 DRLPPKVREHYAHFPTCDSCGRIYWAGSHWRNMRRLLDDV 255
>gi|242399038|ref|YP_002994462.1| hypothetical protein TSIB_1057 [Thermococcus sibiricus MM 739]
gi|242265431|gb|ACS90113.1| hypothetical protein TSIB_1057 [Thermococcus sibiricus MM 739]
Length = 157
Score = 58.2 bits (139), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 21/158 (13%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRD---AKLLRHQ 414
KF+ D+M+ LA+ LR G D + E++ + +E R+LLTRD AK L
Sbjct: 7 KFIADMMLGRLARWLRLYGYDTVYGIE---DDDEILRISREENRILLTRDETLAKRLEDS 63
Query: 415 YLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
LIK+ + + +QL+E+ F E+ +RC KCNG L E
Sbjct: 64 ILIKSNKFEEQV----KQLMELGFEFDELFPEN---ARCPKCNG------LIRRAEKEEI 110
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
+G ++ + +++ +F+ C C Q+YW G Q+ V+
Sbjct: 111 RG--KVLEGVYEDYDEFYICTQCGQIYWPGRQWREMVK 146
>gi|386284291|ref|ZP_10061513.1| hypothetical protein SULAR_03552 [Sulfurovum sp. AR]
gi|385344576|gb|EIF51290.1| hypothetical protein SULAR_03552 [Sulfurovum sp. AR]
Length = 162
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D + LAK+LR +GID T E EL+ + E R +LT+D L + +
Sbjct: 14 KFIADCHLGKLAKYLRLLGID--TLYFPHIEDDELLRIANDEDRTILTKDRSLSQRK--- 68
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
K ++ ++ QL VI+ ++LK+ SRC CN PL + +E K
Sbjct: 69 KAPVFFLEEKETQAQLKTVIDHYKLKVQPSPF-SRCIVCNT-----PL---QIIEKEKVL 119
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
R+P+ + F C C+++YW G Y +
Sbjct: 120 DRLPEKVKKYFDYFEYCPSCDRIYWRGDHYRH 151
>gi|403357653|gb|EJY78455.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 678
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 14 VTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDE 73
+ STE E L L Q +G+D+EW+PQ + N SL Q+
Sbjct: 341 MISTE--EDIDLLDNLFQDKYIGVDSEWRPQLTKFHN-TAPSLFQI-------------- 383
Query: 74 SNASVVFLLDLSSIPLPSIWEL-LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
S A +L+D S+ + + L +LF + +GF F D+ F + ++ F
Sbjct: 384 SGAKSAYLIDFVSLKHSAYLDKKLSDLFSHEAVCIVGFSFNSDV----EQFARKFPNLKF 439
Query: 133 DR-VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLT 191
R ++ ++D ++ + L LA + +++ + K Q S+W RPL
Sbjct: 440 YRFIKNFIDAQYYFSVV-------TLSPPMTGLAKVSEKVFGKPICKREQMSNWERRPLR 492
Query: 192 EEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
Q++Y A+DA L+++ N K+A+ G+ +SI +
Sbjct: 493 LSQQHYGALDAFILVDLIN----KLAEDGHPKNSIDK 525
>gi|326432840|gb|EGD78410.1| hypothetical protein PTSG_09106 [Salpingoeca sp. ATCC 50818]
Length = 1063
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 46/190 (24%)
Query: 34 LVGLDAEWKPQRSHQSNFPRV--SLLQLACQPGPRFNPESDESNASVVFLLDL-----SS 86
LVG+D EW+ PRV +++Q+A V+++D +
Sbjct: 905 LVGIDTEWRQ--------PRVACTVMQIAV--------------CDSVWIVDTLIHTKTK 942
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQD---LIYLSSTFCSQGCDIGFDRVEPYLDITS 143
+ LL+ LF + LGF FK D +I L S+ P + T
Sbjct: 943 QYAQHVAALLEFLFACEHVHVLGFSFKDDVRHIIPLCPVLASK----------PLVSFTD 992
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
+ L +QL +K SL+ C+ + L+K QCS+W RPL +Q YAAIDA
Sbjct: 993 V-QQLVRRQLKKK---GQPSLSLACERVFGRPLNKMEQCSNWERRPLRRDQLEYAAIDAW 1048
Query: 204 CLIEIFNIFQ 213
CLI I++ +
Sbjct: 1049 CLIGIYSHYN 1058
>gi|374991809|ref|YP_004967304.1| hypothetical protein SBI_09055 [Streptomyces bingchenggensis BCW-1]
gi|297162461|gb|ADI12173.1| hypothetical protein SBI_09055 [Streptomyces bingchenggensis BCW-1]
Length = 253
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 23/158 (14%)
Query: 355 GYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
G P +FL DV + LA+ LR +G+DAA +P L ++ ++RVLL+RD LLR
Sbjct: 86 GAPLRFLLDVHLGTLARRLRLLGVDAAYESEDIGDP-ALAALSAAQQRVLLSRDRGLLRR 144
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPL--STEEAV 471
+ L V S + QL +V+ F +++ +RCT CNG PL + ++AV
Sbjct: 145 RELWAGAF--VYSDRPDDQLRDVLGRFTPQLAP---WTRCTACNG-----PLEDADKDAV 194
Query: 472 EA--AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
G +R D F QC C ++YW G +
Sbjct: 195 RERLEHGTRRTYDV-------FAQCTVCERVYWRGAHH 225
>gi|297307109|ref|NP_001137329.2| Werner syndrome ATP-dependent helicase [Bos taurus]
Length = 1404
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + + RV+L+QL ES + + +
Sbjct: 67 ISMSLSDGDVVGFDIEWPPFK--KGTLSRVALIQLCVA----------ESKCYLFHISSM 114
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G +QD L F DI + +++T +
Sbjct: 115 SGFP-----QGLKMLLENEAIKKAGVGIEQDQWKLLRDF-----DINLKSI---VELTDV 161
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CSDWS PLTE+QK YAA D
Sbjct: 162 ANE--------KLKCIETWSLNGLVKYLFGKQLLKDRSIRCSDWSRFPLTEDQKVYAATD 213
Query: 202 AHCLIEIF 209
A+ I+
Sbjct: 214 AYAGFIIY 221
>gi|448435678|ref|ZP_21586814.1| hypothetical protein C472_11159 [Halorubrum tebenquichense DSM
14210]
gi|445683403|gb|ELZ35799.1| hypothetical protein C472_11159 [Halorubrum tebenquichense DSM
14210]
Length = 189
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 17/178 (9%)
Query: 350 SLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDA 408
++ GD P L DVM LA +LR G DAA ++ E + L+ + E R L+TRD
Sbjct: 13 AVDGDDPPPVLLDVMCGKLATYLRLCGYDAAYALDREAEADDRLLALAAAEDRTLITRDR 72
Query: 409 KLLRHQYLIKNQIYRVKSLLKNQQLLE---VIEAFQLKISEDQLMSRCTKCNGRFIQKPL 465
L + V LL + +L+ ++A +I SRC CNG +++
Sbjct: 73 DLAERAPDADLAVDAV--LLTERDVLDQLRELDAAGFRIELAAEPSRCGSCNGP-VERVA 129
Query: 466 STEEAVEAAKGFQR---------IPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
S E A + +PD + + W+C+DC Q +W+G + + +
Sbjct: 130 SAEPASDPGDAADAADPADRPDYVPDDVG-TDRSGWRCVDCGQWFWKGGHWDDVSARI 186
>gi|167838254|ref|ZP_02465113.1| hypothetical protein Bpse38_17231 [Burkholderia thailandensis
MSMB43]
gi|424901397|ref|ZP_18324913.1| hypothetical protein A33K_12751 [Burkholderia thailandensis MSMB43]
gi|390931772|gb|EIP89172.1| hypothetical protein A33K_12751 [Burkholderia thailandensis MSMB43]
Length = 251
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQ-TSKEKRVLLTRDAKLLRHQYL 416
+F+ D + GLA+ LR G D P +LI+ ++E R++LTRD +LL+ +
Sbjct: 97 RFIADAHLGGLAQLLRLAGFDTLY---DNHYPDDLIEAIAAREARIVLTRDRELLKRR-T 152
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
I + Y V++L QL E+ + L Q C CN PL ++ A+
Sbjct: 153 ITHGCY-VRALKPQAQLRELFDRLDLA-GAAQPFRLCLSCNA-----PLRR---IDPAEA 202
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
R P + ++ +F C C +++WEG+ + ++ ID
Sbjct: 203 EGRAPQGVLQRHTRFVTCDVCRRVFWEGSHWRR-MRALID 241
>gi|15644110|ref|NP_229159.1| hypothetical protein TM1358 [Thermotoga maritima MSB8]
gi|170289260|ref|YP_001739498.1| hypothetical protein TRQ2_1471 [Thermotoga sp. RQ2]
gi|281412862|ref|YP_003346941.1| hypothetical protein Tnap_1445 [Thermotoga naphthophila RKU-10]
gi|418045415|ref|ZP_12683510.1| protein of unknown function DUF82 [Thermotoga maritima MSB8]
gi|4981928|gb|AAD36438.1|AE001790_10 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|170176763|gb|ACB09815.1| protein of unknown function DUF82 [Thermotoga sp. RQ2]
gi|281373965|gb|ADA67527.1| protein of unknown function DUF82 [Thermotoga naphthophila RKU-10]
gi|351676300|gb|EHA59453.1| protein of unknown function DUF82 [Thermotoga maritima MSB8]
Length = 164
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F D + LAK LR +G+D S+ EP +++ KE R+LLT+ L++
Sbjct: 5 RFAVDASLVPLAKKLRILGVDVKVCYSE--EPGKVLLICRKEGRILLTKKCSLIKFFEKY 62
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+++ +K + L VIE F+LK +RC CN + P EE +E
Sbjct: 63 GQKVFYIKD---EKDLKRVIEHFKLKPER----ARCPYCNRELL--PTPREEVIE----- 108
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
++P +F +F +C C +++W G+
Sbjct: 109 -KVPLYVFLNAEKFSRCPSCGRIFWRGSH 136
>gi|385207519|ref|ZP_10034387.1| hypothetical protein BCh11DRAFT_04571 [Burkholderia sp. Ch1-1]
gi|385179857|gb|EIF29133.1| hypothetical protein BCh11DRAFT_04571 [Burkholderia sp. Ch1-1]
Length = 251
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D E + + ++R++LTRD +LL+ + I
Sbjct: 97 RFIADAHLGGLAPLLRLAGFDTLYDNHFPDADIEAL--AAAQQRIVLTRDRELLKRRN-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L +QL EV E L S Q C CN PL E
Sbjct: 154 THGCY-VRTLRPREQLREVFERLDLAGSA-QPFRLCLMCN-----VPLRRIPKEEVGT-- 204
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R PD + +++ QF C C +++WEGT +
Sbjct: 205 -RAPDGVLERHAQFVTCDVCRRVFWEGTHW 233
>gi|219852556|ref|YP_002466988.1| hypothetical protein Mpal_1962 [Methanosphaerula palustris E1-9c]
gi|219546815|gb|ACL17265.1| protein of unknown function DUF82 [Methanosphaerula palustris
E1-9c]
Length = 155
Score = 57.8 bits (138), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 364 MVEGLAKHLRCVGIDAATPRS-KKPEPRE---LIDQTSKEKRVLLTRDAKLLRHQYLIKN 419
M+ L ++LRC+G D + S +P+E L+ +E RVLLTRD +L R KN
Sbjct: 1 MLGTLTRYLRCMGYDTLSANSFPVGDPKEDTFLLSLAGEEGRVLLTRDHELARRG---KN 57
Query: 420 QIYRVKSLLKNQQLLEVIEAFQLKISEDQLM-SRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
+ ++S + L +V + L + Q++ SRC CNG + P + E+ AA
Sbjct: 58 RAVLIRS---DDVLDQVRQLTALGLVTPQVVTSRCPLCNG--LLSPATVEQVASAAT--- 109
Query: 479 RIPDCLFDK-NLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKL 520
P D+ + F+ C C +LYW+G+ + Q+ +C +
Sbjct: 110 YAPA---DQVGILFFWCHHCGRLYWQGSHGDDLQQRLSTICSV 149
>gi|94309119|ref|YP_582329.1| hypothetical protein Rmet_0174 [Cupriavidus metallidurans CH34]
gi|93352971|gb|ABF07060.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 266
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ S EKR++LTRD +LL+ + I
Sbjct: 97 RFVADAHLGGLAHLLRMTGFD--TLYDNHFEDCEIARIASDEKRIVLTRDRELLKRRG-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V+++ + Q+ E+ L S + S C CN PL +
Sbjct: 154 THGCY-VRAIRSSLQVREIFSRLDLARSA-RPFSLCLDCN-----VPLRRIGKTDVDG-- 204
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P+ +F+++ F C C++++WEG+ +
Sbjct: 205 -RVPEGVFERHEHFVTCPHCHRVFWEGSHW 233
>gi|82701281|ref|YP_410847.1| hypothetical protein Nmul_A0146 [Nitrosospira multiformis ATCC
25196]
gi|82409346|gb|ABB73455.1| Protein of unknown function DUF82 [Nitrosospira multiformis ATCC
25196]
Length = 251
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D + EL+ ++EKR++LTRD +LL+ + I
Sbjct: 97 RFIADAHLGGLAHLLRMTGFDTLYDNNYHDRQIELL--AAQEKRIVLTRDRELLKRRS-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L +QL E+ + L S + + C CN PL VE +
Sbjct: 154 THGCY-VRTLKPPEQLCEIFDRLDLAHS-IKPFTLCLNCNA-----PL---RPVEKSVVL 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+R+P + ++ F C C++++WEG+ +
Sbjct: 204 ERLPPSVRERFDHFSTCDICHRVFWEGSHW 233
>gi|353243741|emb|CCA75245.1| related to nucleolar 100K polymyositis-scleroderma protein
[Piriformospora indica DSM 11827]
Length = 847
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L QS + +D E+ S++S + V L+Q+ SN +++D
Sbjct: 254 LKQSEEIAIDLEY---HSYRSYYGFVCLMQV--------------SNRQQDWVVDCLVPE 296
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+ + E+L E+F P+I+K+ + D+++L F +L I ++++
Sbjct: 297 IRANLEILNEVFTDPNIVKVLHGAESDIVWLQENF--------------HLYIVNLFDTF 342
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
H + +LP+ SLA + D + K Q +DW RPL E +YA D H L+ I
Sbjct: 343 HASR-ALELPRH--SLAFLLSAYCDFTADKRYQLADWRIRPLPAEMLHYARSDTHFLLFI 399
Query: 209 FNIFQVKVAQKGNSCSSISELDSSNL 234
++ + + +KG + S+ D+ L
Sbjct: 400 YDQLREALLEKGKNPSTPPAEDAPPL 425
>gi|338720942|ref|XP_001915839.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase-like [Equus caballus]
Length = 1405
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ RV+L+QL ES + + +
Sbjct: 69 ISLSLSDGDVVGFDMEWPPIY-NKRKLDRVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K+G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLXNKAIKKVGVGIEGDQWXLLRDF-----DI---KLKSFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N KL E SL + K L L K ++CSDW+N PLTE+QK YAA D
Sbjct: 165 ANE--------KLKCAEIWSLNGLVKHLFGKQLLKDKSVRCSDWNNFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRKLEI 229
>gi|289573178|ref|ZP_06453405.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289537609|gb|EFD42187.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length = 252
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA+ LR +G D T S + L D + E+R+LLTRD LL+ + +
Sbjct: 97 PRFVVDVNLGQLARLLRLLGFD--TRWSSAADDPTLADISLGEQRILLTRDRGLLKRRAI 154
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V S +Q LEV+ L +S C +CNG +S +E + +
Sbjct: 155 THGLF--VHSQHPEEQALEVLRRLDLN-GRLAPLSWCLRCNGEL--AAVSKDEVIGQLEP 209
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
R F +C C ++YW G+ + V+
Sbjct: 210 LTR------RYYESFSRCFGCGRIYWPGSHHARLVR 239
>gi|320162311|ref|YP_004175536.1| hypothetical protein ANT_29100 [Anaerolinea thermophila UNI-1]
gi|319996165|dbj|BAJ64936.1| hypothetical protein ANT_29100 [Anaerolinea thermophila UNI-1]
Length = 235
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ D + LA +LR +G D+ E EL +++R+LLTRD +LL + +
Sbjct: 85 PRFVLDNHLGRLAAYLRMLGYDSLYRNDFADE--ELAQIAVQQERILLTRDRRLLMRKGI 142
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ V+S +Q+ EV+ F L + RC +CN + +S E +E +
Sbjct: 143 QYG--HWVRSQNPREQVAEVVRRFCLNHRQGAF-QRCLRCNTPL--EAVSKESVLEQLEP 197
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+ +D +F +C C Q+YW+G+ Y
Sbjct: 198 LTRL---YYD---EFHRCPSCGQVYWKGSHY 222
>gi|109504268|ref|XP_001059940.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform 1
[Rattus norvegicus]
gi|392354016|ref|XP_002728460.2| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Rattus
norvegicus]
Length = 1400
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ LS +VG D EW P Q RV+++QL ES + + +
Sbjct: 63 ISMHLSDGDVVGFDMEWPPIYK-QGKRSRVAVIQLCV----------SESKCYLFHISSM 111
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F D+ ++E ++++T +
Sbjct: 112 SVFP-----QGLKMLLENKSIRKAGVGIEGDQWKLLRDF-----DV---KLESFVELTDV 158
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N RKL ET SL + K +L L K ++CS+WS+ PL+E+QK YAA D
Sbjct: 159 AN--------RKLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSDFPLSEDQKLYAATD 210
Query: 202 AHCLIEIF 209
A+ + I+
Sbjct: 211 AYAGLIIY 218
>gi|383764946|ref|YP_005443928.1| hypothetical protein CLDAP_39910 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381385214|dbj|BAM02031.1| hypothetical protein CLDAP_39910 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 247
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + LA +LR G D T EL +++E R+LLTRD LL+ + ++
Sbjct: 97 RFIVDAHLGQLAAYLRMFGFD--TLYRNDFNDCELAQISAQEHRILLTRDRGLLKRRIVV 154
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y V+ + +QL+ V++ ++L + RCT CNG + +P+ ++ +
Sbjct: 155 FG--YCVRDVEPRRQLVSVLQRYRLG-GCVRPWQRCTHCNG--LLRPVEKRAVLDRLEPK 209
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++ +D +F QC C Q+YW+G+ +
Sbjct: 210 TKL---YYD---EFQQCETCGQVYWQGSHF 233
>gi|307731295|ref|YP_003908519.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307585830|gb|ADN59228.1| protein of unknown function DUF82 [Burkholderia sp. CCGE1003]
Length = 289
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D E + T + R++LTRD +LL+ + I
Sbjct: 97 RFIADAHLGGLAPLLRLAGFDTLYDNHFPDAHIEALAAT--QDRIVLTRDRELLKRR-AI 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L +QL EV E L S Q C CN PL E
Sbjct: 154 THGCY-VRALRPREQLREVFERLDLAGSA-QPFRLCLMCNA-----PLRRIGRDEVG--- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
R PD + ++ QF C C +++WEGT + ++ ID
Sbjct: 204 DRAPDGVLQRHKQFVTCDVCRRVFWEGTHWQR-MRALID 241
>gi|296472380|tpg|DAA14495.1| TPA: Werner syndrome [Bos taurus]
Length = 707
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + + RV+L+QL ES + + +
Sbjct: 67 ISMSLSDGDVVGFDIEWPPFK--KGTLSRVALIQLCVA----------ESKCYLFHISSM 114
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G +QD L F DI + +++T +
Sbjct: 115 SGFP-----QGLKMLLENEAIKKAGVGIEQDQWKLLRDF-----DINLKSI---VELTDV 161
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CSDWS PLTE+QK YAA D
Sbjct: 162 AN--------EKLKCIETWSLNGLVKYLFGKQLLKDRSIRCSDWSRFPLTEDQKVYAATD 213
Query: 202 AHCLIEIF 209
A+ I+
Sbjct: 214 AYAGFIIY 221
>gi|149186862|ref|ZP_01865172.1| ribonuclease D [Erythrobacter sp. SD-21]
gi|148829529|gb|EDL47970.1| ribonuclease D [Erythrobacter sp. SD-21]
Length = 411
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 57/298 (19%)
Query: 9 LKIH-LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
+KIH L+T T++ + L++S V +D E+ + ++ +P + L+Q+A
Sbjct: 2 MKIHDLITDTDT--LAAMCERLAKSDFVTVDTEFMRENTY---WPELCLVQIA------- 49
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
++E A++ L D I L +W+LL + + ++LK+ QD + + F +
Sbjct: 50 ---NEEEAAAIDPLAD--GIDLQPLWDLLCD---NEEVLKVFHAGGQD-VEIVYNFTGKT 100
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
FD + I+ ++Q+G AN+ + + I++ K + +DW
Sbjct: 101 PHPIFDTQIAMMAIS------QNEQIG---------YANLVESWMGITVDKGARFTDWGR 145
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD--------SSNLDLGLK 239
RPLT+ Q YA D L +IF + K+ + G +E+D ++N DL K
Sbjct: 146 RPLTDRQIEYAIGDVTHLSKIFPMILKKLIKTGRGVWLDAEMDKLADPANYANNADLAWK 205
Query: 240 GILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIV 297
I + N TV +L +AL R + + +P G + R DE+L I
Sbjct: 206 RI--RSPGRNPTVLGRL-KALAAWRESEAQHKDIPRGRIMR---------DETLADIA 251
>gi|296472378|tpg|DAA14493.1| TPA: Werner syndrome [Bos taurus]
Length = 744
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + + RV+L+QL ES + + +
Sbjct: 67 ISMSLSDGDVVGFDIEWPPFK--KGTLSRVALIQLCVA----------ESKCYLFHISSM 114
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G +QD L F DI + +++T +
Sbjct: 115 SGFP-----QGLKMLLENEAIKKAGVGIEQDQWKLLRDF-----DINLKSI---VELTDV 161
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CSDWS PLTE+QK YAA D
Sbjct: 162 ANE--------KLKCIETWSLNGLVKYLFGKQLLKDRSIRCSDWSRFPLTEDQKVYAATD 213
Query: 202 AHCLIEIF 209
A+ I+
Sbjct: 214 AYAGFIIY 221
>gi|406894045|gb|EKD38950.1| hypothetical protein ACD_75C00553G0006 [uncultured bacterium]
Length = 378
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
K++ + TE+ E L R Q+ V LD E+ +R++ +P++ L+Q+A
Sbjct: 3 KLNTLIQTEA-ELDILVRRAKQTDAVALDTEFVWERTY---YPQLGLIQIAL-------- 50
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
SDE +L+D ++ + L +L ++K+ QDL L + +
Sbjct: 51 -SDED----CYLIDPVAV---KNLQALGQLLSDRGVVKILHDAPQDLAILQRATGATPQN 102
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
I R+ LP T SL N+ KELLDI LSKE ++W RP
Sbjct: 103 IFDTRLAAGFS---------------NLPA-TLSLGNLVKELLDIELSKEETRTNWLQRP 146
Query: 190 LTEEQKNYAAIDAHCL 205
LTEEQ YA D L
Sbjct: 147 LTEEQVRYALDDVRYL 162
>gi|344175616|emb|CCA86729.1| conserved hypothethical protein, DUF82 [Ralstonia syzygii R24]
Length = 255
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 23/190 (12%)
Query: 324 SSVIVDSREKRLDDIGDWQGPPPWDLSLGG------DGYPKFLCDVMVEGLAKHLRCVGI 377
+V VD R +L+++ +G +++ G D FLCD + A+ LR G
Sbjct: 50 GAVQVDGRAAQLEEVLPARG----AVAVTGARAALPDAPLHFLCDAHLGATARLLRMAGF 105
Query: 378 DAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVI 437
D A + E + T E ++L+RD +LL+ + + + R + Q+ E++
Sbjct: 106 DTAYDNNYADATIEALAHT--EDWIVLSRDRELLKRRGIRRGAFIRARE--PQAQMREIV 161
Query: 438 EAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDC 497
F+L + + SRC +CN PL A EAA +P + ++ F C C
Sbjct: 162 ARFKLAEAA-RPFSRCLECNA-----PLRLLSADEAAAS---VPPRVRERQHLFSTCDVC 212
Query: 498 NQLYWEGTQY 507
++YW G+ +
Sbjct: 213 RRVYWPGSHW 222
>gi|320583859|gb|EFW98072.1| hypothetical protein HPODL_0702 [Ogataea parapolymorpha DL-1]
Length = 729
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L +F P+I+K+ D+I+L D+G L + S+++ H R
Sbjct: 286 LNVIFTDPNIVKVFHGAFMDIIWLQR-------DLG-------LYVVSLFDTYH---ASR 328
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
+L SLA++ + + SK+ Q +DW RPL E KNYA D H LIE+F +
Sbjct: 329 ELGLGRHSLAHLLETYVKFKTSKKWQLADWRMRPLNSEMKNYAKADTHFLIEVFYKMHSE 388
Query: 216 VAQKGNSCSSI 226
+ Q + +
Sbjct: 389 LVQNPDKLKKV 399
>gi|16082121|ref|NP_394558.1| hypothetical protein Ta1099 [Thermoplasma acidophilum DSM 1728]
gi|10640412|emb|CAC12226.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 157
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 354 DGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
DG K D M+ LA+ +R +G D P P+ E+I ++ E R+++TRD + +
Sbjct: 10 DGEIKLTVDQMLGKLARWIRLMGYDVYYPSGTVPDD-EIITKSRSEGRIIITRDYGMYQK 68
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ + Y N QL + I F ++ +D+ M RC CNGR +
Sbjct: 69 YPMSIFEPYDDI----NDQLRDFIAHFSSRM-KDRFM-RCPVCNGRLV------------ 110
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQK 513
K +IP+ L + + C C+++YW+G+ Y +K
Sbjct: 111 -KLRSKIPEYLRNHR-DVYICTGCHKMYWKGSHYRRIYRK 148
>gi|149057893|gb|EDM09136.1| rCG43045, isoform CRA_b [Rattus norvegicus]
Length = 1335
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ LS +VG D EW P Q RV+++QL ES + + +
Sbjct: 63 ISMHLSDGDVVGFDMEWPPIYK-QGKRSRVAVIQLCV----------SESKCYLFHISSM 111
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F D+ ++E ++++T +
Sbjct: 112 SVFP-----QGLKMLLENKSIRKAGVGIEGDQWKLLRDF-----DV---KLESFVELTDV 158
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N RKL ET SL + K +L L K ++CS+WS+ PL+E+QK YAA D
Sbjct: 159 AN--------RKLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSDFPLSEDQKLYAATD 210
Query: 202 AHCLIEIF 209
A+ + I+
Sbjct: 211 AYAGLIIY 218
>gi|357021245|ref|ZP_09083476.1| hypothetical protein KEK_14563 [Mycobacterium thermoresistibile
ATCC 19527]
gi|356478993|gb|EHI12130.1| hypothetical protein KEK_14563 [Mycobacterium thermoresistibile
ATCC 19527]
Length = 253
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 390 RELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL 449
REL + ++ ++R+LLTRD LL+ + + V+S QQ++EV+ L +
Sbjct: 128 RELAEISAAQQRILLTRDRGLLKRRAVTHGLF--VRSDQPEQQVIEVVTRLDLG-ARLAP 184
Query: 450 MSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
+RC +CNG + AV + R+ +F QC DC+++YW GT +H
Sbjct: 185 FTRCMRCNGMLV--------AVGKDEVHDRLEPLTRRYYDEFAQCTDCDRIYWPGT-HHA 235
Query: 510 AVQKFID 516
+ K ++
Sbjct: 236 RMLKLVE 242
>gi|401413034|ref|XP_003885964.1| Ribonuclease D, related [Neospora caninum Liverpool]
gi|325120384|emb|CBZ55938.1| Ribonuclease D, related [Neospora caninum Liverpool]
Length = 1387
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 7 KPLK-IHLVTSTESPEFTHLARALSQSS--LVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
KPLK LV +E E HL LS + LV +D E S S LLQL+ +
Sbjct: 451 KPLKDTPLVRISEKEELQHLVDELSTGAHPLVAIDLE---HHSFHSYRGFTCLLQLSTR- 506
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
E D +L+D PL +L + +P ILK+ D+I+L F
Sbjct: 507 ------EKD-------YLID--PFPLFEHLHVLNAITANPKILKIFHGADSDIIWLQRDF 551
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCS 183
++ FD T + G SLAN+ + +K+ Q +
Sbjct: 552 SVYVVNM-FD--------TCVAARALAVPGG-------ASLANLLHTYCGVEANKQYQLA 595
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILE 243
DW RPLT E + YA D H L IF++ + ++ K ++S + L+ G LE
Sbjct: 596 DWRRRPLTPEMEAYARSDTHYLPFIFDVMKNQLLSKPELGGALSPPAVTGLEEG----LE 651
Query: 244 KPDIGNKTVRFKLCEALDI 262
+ G + ++F L + D+
Sbjct: 652 VTEAGQQAMQFTLDRSRDV 670
>gi|14590613|ref|NP_142681.1| hypothetical protein PH0738 [Pyrococcus horikoshii OT3]
gi|3257146|dbj|BAA29829.1| 155aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 155
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D+M+ LA+ LR G D R + E+I KE R++LTRD +L++ +
Sbjct: 2 KFIADMMLGRLARWLRLYGYDT---RYGVEDDDEIISIAKKEGRIILTRDFELVKKARKL 58
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM---SRCTKCNGRFIQKPLSTEEAVEAA 474
V+S +Q+ ++++A I +L +RC KCNG ++ +
Sbjct: 59 GIDAIYVESNSIEEQMAQLMKA---GIKFGELFPEGARCPKCNGIIVKVKKEEVKGKVPE 115
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
K ++ ++D +F+ C +C Q+YW G Q+ ++
Sbjct: 116 KIYR-----MYD---EFYVCTNCGQIYWPGRQWEEMLK 145
>gi|170590466|ref|XP_001899993.1| 3'-5' exonuclease family protein [Brugia malayi]
gi|158592625|gb|EDP31223.1| 3'-5' exonuclease family protein [Brugia malayi]
Length = 331
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 48/238 (20%)
Query: 21 EFTHLARALSQSSLVGLDAEWKP-----------------QRSHQSNFPRVSLLQLACQP 63
+ L + ++ L+G+D EWKP + S + +V+L Q+ Q
Sbjct: 27 DLEELYPVIEEADLIGIDTEWKPLFICTNERLKTFLEIARKVSVGLSLLQVALFQICVQH 86
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSST 122
+ +V ++ L ++ W K LF +KLGF F DL L ++
Sbjct: 87 C-----------SYLVDVITLENVLTEEQWTRFFKALFCDSTAIKLGFDFLNDLKVLRAS 135
Query: 123 F-------------CSQGCDIGFDRVEP-YLDITSIYN---HLHHKQLGRKLPKETKS-- 163
+ C P +LD + N + L + ET
Sbjct: 136 YPYLQPLEEMKNVVCILKLVKSLLASNPAFLDFSDSINLPLSSETENLLDIVSDETVHFR 195
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L ++C+++L +L K Q +W+ RPL EQ YAA+D +CL+ ++N +++ + N
Sbjct: 196 LTDLCRKVLGQALDKTEQIGNWAMRPLRREQMKYAAMDGYCLLNLYNKLKIRAERDYN 253
>gi|377821932|ref|YP_004978303.1| hypothetical protein BYI23_A024880 [Burkholderia sp. YI23]
gi|357936767|gb|AET90326.1| hypothetical protein BYI23_A024880 [Burkholderia sp. YI23]
Length = 256
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSK-EKRVLLTRDAKLLRH 413
G +F+ D + GLA+ LR G D R P E I+Q ++ E R++LTRD +LL+
Sbjct: 97 GGLRFIADAHLGGLAQLLRLAGFDT---RYDNNFPDEEIEQLAQDEARIVLTRDRELLKR 153
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ +++ V++L ++Q EV F L + C CN PL +
Sbjct: 154 RSVLRGCY--VRALQPDEQFREVSARFDLA-PHVRAFRLCLMCNA-----PLRPAGPGDI 205
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P+ + +++ +F C C +++WEG+ +
Sbjct: 206 DG---RVPEGVRERHSRFVTCDVCRRVFWEGSHW 236
>gi|302673415|ref|XP_003026394.1| hypothetical protein SCHCODRAFT_114457 [Schizophyllum commune H4-8]
gi|300100076|gb|EFI91491.1| hypothetical protein SCHCODRAFT_114457, partial [Schizophyllum
commune H4-8]
Length = 357
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 39/196 (19%)
Query: 30 SQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDE------SNASVVFLLD 83
S ++V D E+K ++ S ++L P P + S + VV D
Sbjct: 48 SNFAIVAFDVEYKGRKHSDSE------MRLLPVPLPLSHRRSHFLRLLTIARDGVVIAFD 101
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
L + L +I L E+F P I+K+G + K D I + F +
Sbjct: 102 L--VALGAIPGRLIEIFADPTIIKVGIELKSDCILILRHFA-----------------VA 142
Query: 144 IYNHLHHKQLGRKLPKETK--------SLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
+YN QL + + + SL ++ + + + + KE+Q SDW LTEEQ
Sbjct: 143 VYNGWELSQLWKSMHPSIEAGPLTSHISLDDMARITVGVRIMKEMQRSDWGTSVLTEEQI 202
Query: 196 NYAAIDAHCLIEIFNI 211
+YA IDA+ LI + ++
Sbjct: 203 DYALIDAYMLIPMIHV 218
>gi|322801849|gb|EFZ22421.1| hypothetical protein SINV_07950 [Solenopsis invicta]
Length = 612
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 40/189 (21%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
++G D EW + VSLLQLA +N VV L + I I
Sbjct: 99 GILGFDCEWVKEGP-------VSLLQLA-------------TNNGVVALFRIGKIGY--I 136
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
LKEL + ILK+G +D L + GC RV LD+ ++ + L+
Sbjct: 137 PFKLKELLATKHILKVGVSSFEDGQKLVKDY---GC-----RVNGTLDLRTLADSLN--- 185
Query: 153 LGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
LP KSLA +C++ L+I + K E++C DW L+++Q YAA DA + I++
Sbjct: 186 ----LPSR-KSLAAMCEQYLNIEMDKLIEVRCGDWDASTLSDDQVAYAACDALASVIIYH 240
Query: 211 IFQVKVAQK 219
K +K
Sbjct: 241 KIMEKNKEK 249
>gi|385304629|gb|EIF48639.1| putative nuclear exosome component rrp6p [Dekkera bruxellensis
AWRI1499]
Length = 607
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 33/202 (16%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L + ++G+D E R++ SL+Q++ G + ++D
Sbjct: 207 LLSELEKCKVIGVDLEHHDYRTYHG---LTSLMQISTDTGKDY-------------IVDP 250
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S L LL +F +PDI+K+ D+++L D+G L + S+
Sbjct: 251 LSAQLRPHLSLLNIVFTNPDIIKVFHGAFMDMMWLQR-------DLG-------LYVVSL 296
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
++ ++L SLA + ++ + SK+ Q +DW RPL E +NYA D H
Sbjct: 297 FDTY---WAAKELTLGKYSLAFLLEKYIHFRTSKKWQLADWRIRPLGPEMRNYAKADTHF 353
Query: 205 LIEIFNIFQVKVAQKGNSCSSI 226
LIE+F Q ++ K + +
Sbjct: 354 LIELFGKIQXELIXKPGAMKRV 375
>gi|410100003|ref|ZP_11294968.1| hypothetical protein HMPREF1076_04146 [Parabacteroides goldsteinii
CL02T12C30]
gi|409216558|gb|EKN09542.1| hypothetical protein HMPREF1076_04146 [Parabacteroides goldsteinii
CL02T12C30]
Length = 194
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 35/182 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L+Q VG D E +P + + ++SL+Q++ +DE+ FL L+ I
Sbjct: 42 LTQFEAVGFDTETRPSFKKGTRY-KISLMQIS----------TDEA----CFLFRLNRIG 86
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+P + L++ V+ ILK+G + D F + DI N L
Sbjct: 87 IP---QSLEDFLVNDKILKIGLSLRDD----------------FGAMRKRTDIKPA-NFL 126
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ + E SL I L D +SK + S+W LTE+QK YAA+DA ++I
Sbjct: 127 DLQNYVGQFGIEDASLQKIYAILFDKKISKGQRLSNWEADVLTEQQKKYAALDAWACLKI 186
Query: 209 FN 210
+N
Sbjct: 187 YN 188
>gi|405977154|gb|EKC41618.1| Exonuclease 3'-5' domain-containing protein 2 [Crassostrea gigas]
Length = 860
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 6 RKPLKIHLVTSTES-PEFTHLARALSQS-SLVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
R+ K+H++ S E EF H R L Q+ ++GLD EW SH VSLLQ+A
Sbjct: 283 REKKKVHVIESPEIWEEFCH--RILKQNIKVIGLDCEWV---SHGKRALPVSLLQVATPK 337
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
G + +V L +S +P E L ++ ILK+G D L +
Sbjct: 338 G----------DCGLVRLSKMSEVP-----ESLHQIMQDRSILKVGVAVVDDGKKLGRDY 382
Query: 124 --CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKE-- 179
QGC D + I+N +T+SL I KE+LD+ + K+
Sbjct: 383 GITVQGC---VDLRYVLARVRGIFN------------VKTESLREITKEVLDVVIEKDAA 427
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
++ +W TE Q +YAA DA ++IF
Sbjct: 428 VRRGNWEAETYTEAQIDYAAKDALVGVDIFT 458
>gi|327352334|gb|EGE81191.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis ATCC 18188]
Length = 1064
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S + VS++QLA +
Sbjct: 817 KDITVHYCTSLQTSE--RVAQHFLSETVVGLDLEWKAQASTRDALVDNVSMIQLASK--- 871
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
+ + L + ++ P + LK L SP+++K+G + D L
Sbjct: 872 ------ERIAVFHLALFNPANSPQHLVSPTLKRLLESPELVKVGVAIRADCTRLYKFLGL 925
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCS 183
Q ++ +++ ++ + H + + K +LA +E L + L K E++C
Sbjct: 926 QTTNL--------CEVSRLHKVVKHHLNPKLINKRLVNLAEQVEEHLGLPLDKDPEIRCG 977
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
WS + L Q Y A D + +++F++ + K
Sbjct: 978 GWSKK-LNYRQVQYVATDPYAALQLFHVLEAK 1008
>gi|424841170|ref|ZP_18265795.1| ribonuclease D [Saprospira grandis DSM 2844]
gi|395319368|gb|EJF52289.1| ribonuclease D [Saprospira grandis DSM 2844]
Length = 194
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 41/189 (21%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLL-DLSS 86
AL+Q ++G D E KP +P VSL+QLA P+ VFL+ +L S
Sbjct: 39 ALNQCKILGFDTESKPSFRKGEYYP-VSLIQLAM-------PDK-------VFLIRNLKS 83
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSST--FCSQGCDIGFDRVEPYLDITSI 144
+ LK LF +P I+K G + D+ L F ++G + DI I
Sbjct: 84 ----GFSDGLKALFENPKIVKAGPALRDDIRDLQRLRPFTAKG----------FKDIADI 129
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+Q+G + N+ L +SK Q S+W PL++ Q YAA DA+
Sbjct: 130 AKANGIQQMGAR---------NLTAIFLGKRISKSQQTSNWEREPLSQAQNFYAATDAYL 180
Query: 205 LIEIFNIFQ 213
++I+ +F+
Sbjct: 181 GLKIYTLFE 189
>gi|385802596|ref|YP_005838996.1| hypothetical protein Hqrw_1247 [Haloquadratum walsbyi C23]
gi|339728088|emb|CCC39210.1| DUF82 family protein [Haloquadratum walsbyi C23]
Length = 183
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 39/176 (22%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAA-----TPRSKKPEPR-------------------ELI 393
+FL D M+ L+ +LR G DAA TP + E R E++
Sbjct: 10 RFLLDAMLGSLSTYLRMCGHDAAYVLDITPNREVEEDRDTINMDTTPSPSSRGLTDDEIL 69
Query: 394 DQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRC 453
S EKR +LTRD +L + + + + + QL E + ++ +SRC
Sbjct: 70 AHASSEKRTILTRDTELAQR----ADDVVLLTARDVEDQLHE-LATIGYDLTLRPRLSRC 124
Query: 454 TKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
CNGR + LS++ V DC WQC+ C Q++W+G+ + +
Sbjct: 125 GACNGRI--ESLSSDVVVPEYAPDPSEKDC--------WQCLRCEQIFWKGSHWDD 170
>gi|434408338|ref|YP_007151402.1| DNA-directed DNA polymerase [Stanieria cyanosphaera PCC 7437]
gi|428272091|gb|AFZ38031.1| DNA-directed DNA polymerase [Stanieria cyanosphaera PCC 7437]
Length = 641
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 10 KIHLVTSTESPEFTHLARALSQS-SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
K HLVT+ E + L L + G+D E H S +V L+Q+A P
Sbjct: 56 KYHLVTNVE--QLRKLLDPLIDTIEKFGIDTETTGLDPHTS---KVRLVQIAVLKHP--- 107
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V ++DL++I + L K+L S + LK+G K DL+ L ST
Sbjct: 108 ----------VLVIDLAAIDQTGLTPL-KQLLAS-NCLKIGHNLKFDLMMLKST------ 149
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
GF+ PY D +L +K L L K + +L + ++LL + L+K Q SD+S R
Sbjct: 150 --GFNLEPPYFD-----TYLEYKVLTAGL-KRSNTLETLVQKLLRVKLNKSAQTSDFS-R 200
Query: 189 PLTEEQKNYAAIDAHCLI 206
L +EQ YAA DA L+
Sbjct: 201 SLGKEQLQYAANDAAVLL 218
>gi|426225953|ref|XP_004007122.1| PREDICTED: probable exonuclease mut-7 homolog [Ovis aries]
Length = 764
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 87/218 (39%), Gaps = 63/218 (28%)
Query: 2 DCTYRKPLK---IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
DC YR P+ IH + S E H L +VG+D EW+P PRVSL+Q
Sbjct: 321 DC-YRLPIAREDIHFLASWEE-LARHEDTLLQVCQVVGVDLEWRPSFG-AGGRPRVSLMQ 377
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLPS-------IWELLKELFVSPDILKLGFK 111
+A + VFLLDL + P+ +L+ L P I KLG+
Sbjct: 378 VAVE--------------GRVFLLDLPQLSNPAGGQAPRAFSQLVSRLLSDPSITKLGYG 423
Query: 112 FKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKEL 171
DL L +++ P L Q G++L +
Sbjct: 424 MAGDLRSLGASY-------------PAL-----------AQAGQQL-----------QGG 448
Query: 172 LDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
LD+ L Q RPL E Q YAA DA+CL+E+F
Sbjct: 449 LDL-LQVHRQXXXXXXRPLGEGQLVYAAADAYCLLEVF 485
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 49/208 (23%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQY 415
+ +CD M+ GL + LRC+G+D S + + R+ + +E RV+LT LR Q
Sbjct: 546 RVVCDNMLGGLGRTLRCLGVDVRVLHSGE-DHRQAAEVARQEGRVILTSGLPYHKLRAQV 604
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN-------GRFIQKPL--- 465
+ SL QQ ++ F ++++ + SRC CN + + K L
Sbjct: 605 GAGRCLAVDCSLKAQQQAKAILRHFNVRVTPADIFSRCQACNCDQYLKVSKDVMKQLVRL 664
Query: 466 ---------STEEAVEAAKGFQRIPDC--LFDKNLQ------------------------ 490
++ EA G P C L D +LQ
Sbjct: 665 SVHPGGPGGASSAPEEAPGGCSYDPPCRWLEDADLQTXXXXXXXXLAGVPAGVLRRPGLR 724
Query: 491 -FWQCMDCNQLYWEGTQYHNAVQKFIDV 517
F+ C C +++WEG+ F +V
Sbjct: 725 HFYCCTGCGKVFWEGSHLARVTSNFREV 752
>gi|261190752|ref|XP_002621785.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis SLH14081]
gi|239591208|gb|EEQ73789.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis SLH14081]
Length = 1112
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S + VS++QLA +
Sbjct: 817 KDITVHYCTSLQTSE--RVAQHFLSETVVGLDLEWKAQASTRDALVDNVSMIQLASK--- 871
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
+ + L + ++ P + LK L SP+++K+G + D L
Sbjct: 872 ------ERIAVFHLALFNPANSPQHLVSPTLKRLLESPELVKVGVAIRADCTRLYKFLGL 925
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCS 183
Q ++ +++ ++ + H + + K +LA +E L + L K E++C
Sbjct: 926 QTTNL--------CEVSRLHKVVKHHLNPKLINKRLVNLAEQVEEHLGLPLDKDPEIRCG 977
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
WS + L Q Y A D + +++F++ + K
Sbjct: 978 GWSKK-LNYRQVQYVATDPYAALQLFHVLEAK 1008
>gi|239614893|gb|EEQ91880.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis ER-3]
Length = 1112
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S + VS++QLA +
Sbjct: 817 KDITVHYCTSLQTSE--RVAQHFLSETVVGLDLEWKAQASTRDALVDNVSMIQLASK--- 871
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
+ + L + ++ P + LK L SP+++K+G + D L
Sbjct: 872 ------ERIAVFHLALFNPANSPQHLVSPTLKRLLESPELVKVGVAIRADCTRLYKFLGL 925
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCS 183
Q ++ +++ ++ + H + + K +LA +E L + L K E++C
Sbjct: 926 QTTNL--------CEVSRLHKVVKHHLNPKLINKRLVNLAEQVEEHLGLPLDKDPEIRCG 977
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
WS + L Q Y A D + +++F++ + K
Sbjct: 978 GWSKK-LNYRQVQYVATDPYAALQLFHVLEAK 1008
>gi|354474937|ref|XP_003499686.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Cricetulus griseus]
gi|344242328|gb|EGV98431.1| Werner syndrome ATP-dependent helicase-like [Cricetulus griseus]
Length = 1405
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 43/217 (19%)
Query: 13 LVTSTESPEFTHLARALSQ----SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
+V S E+ + + L+ +S +++G D EW P H RV+++QL
Sbjct: 53 IVYSYEASDCSFLSEDISMRLPDGAVIGFDMEWPPIYKHGKR-NRVAVIQLCMS------ 105
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
ES + + +S P + LK L + I K G + D L F
Sbjct: 106 ----ESKCYLFHISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF----- 151
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDW 185
+I ++E ++++T I N KL ET SL + K +L L K ++CS+W
Sbjct: 152 EI---KLESFVELTDIAN--------EKLKCAETWSLNGLVKHILGKQLLKDKSIRCSNW 200
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
SN PLT++QK YAA DA+ + I+ K+A G++
Sbjct: 201 SNFPLTDDQKLYAATDAYAGLAIYE----KLANLGDT 233
>gi|109086093|ref|XP_001085031.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Macaca
mulatta]
Length = 1432
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 35/190 (18%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
+LS +VG D EW P ++ +V+L+QL ES + + +S
Sbjct: 72 SLSDGDVVGFDMEWPPLY-NKGKLGKVALIQLCV----------SESKCYLFHISSMSVF 120
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
P + LK L + I K G + D L F DI +++ ++++T + N
Sbjct: 121 P-----QGLKMLLENKAIKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDVAN- 166
Query: 148 LHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+KL ET SL+ + K LL L K ++CS+WS PLTE+QK YAA DA+
Sbjct: 167 -------KKLKCTETWSLSGLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYA 219
Query: 205 LIEIFNIFQV 214
I+ ++
Sbjct: 220 GFIIYRNLEI 229
>gi|355697852|gb|EHH28400.1| Werner syndrome ATP-dependent helicase [Macaca mulatta]
Length = 1431
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 35/190 (18%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
+LS +VG D EW P ++ +V+L+QL ES + + +S
Sbjct: 72 SLSDGDVVGFDMEWPPLY-NKGKLGKVALIQLCVS----------ESKCYLFHISSMSVF 120
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
P + LK L + I K G + D L F DI +++ ++++T + N
Sbjct: 121 P-----QGLKMLLENKAIKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDVAN- 166
Query: 148 LHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+KL ET SL+ + K LL L K ++CS+WS PLTE+QK YAA DA+
Sbjct: 167 -------KKLKCTETWSLSGLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYA 219
Query: 205 LIEIFNIFQV 214
I+ ++
Sbjct: 220 GFIIYRNLEI 229
>gi|374628500|ref|ZP_09700885.1| protein of unknown function DUF82 [Methanoplanus limicola DSM 2279]
gi|373906613|gb|EHQ34717.1| protein of unknown function DUF82 [Methanoplanus limicola DSM 2279]
Length = 189
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKP----EPRELIDQTSKEKRVLLTRDAKLLRH 413
KFL D M+ L K+LR G D + P E L++ +E R+LLTRD +L
Sbjct: 27 KFLTDRMLGTLTKYLRFTGYDTKSADVLIPGNNREDSILLEIAKEEGRILLTRDRELAER 86
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
I +KS QL ++I + M RCT CN + +P S EE
Sbjct: 87 GKGI--SAVHIKSDDIFSQLSQIIGEGLISGDLKVQMKRCTLCN--TLLRPASPEEI--- 139
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
+G P ++L F C C +LYW GT N +K D
Sbjct: 140 -EGADYAPS--GRRDLSFCWCPFCRKLYWSGTHLSNLEKKIKD 179
>gi|37526051|ref|NP_929395.1| ribonuclease D [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36785481|emb|CAE14428.1| Ribonuclease D (RNase D) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 375
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 38/213 (17%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
T + + + S V LD E+ R++ +P++ L+QL D
Sbjct: 7 TTDAQLQQVCEGAKKYSKVALDTEFVRTRTY---YPQLGLIQL-----------YDGEQL 52
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDL-IYLSSTFCSQGCDIGFDRV 135
S++ L++++ W+ +EL P ILKL +DL ++L++ C
Sbjct: 53 SLIDPLNITN------WQPFRELITHPQILKLLHAGSEDLEVFLNAFQCLP--------- 97
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
EP +D + + H + A + E + + L K +DW RPL+E+Q
Sbjct: 98 EPMIDTQVLAAFIGHPL--------SCGFAALVAEYIHVELDKSESRTDWLARPLSEKQC 149
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
YAA D + L+ + +I AQ G ++ E
Sbjct: 150 EYAAADVYYLLPLADILMTATAQAGYMEAATGE 182
>gi|257094660|ref|YP_003168301.1| hypothetical protein CAP2UW1_3099 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047184|gb|ACV36372.1| protein of unknown function DUF82 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 151
Score = 56.6 bits (135), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 66/150 (44%), Gaps = 24/150 (16%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
K LCD M++GLA+ LR G D A + R LI++ E+R+LLTRD LL +
Sbjct: 2 KLLCDEMLKGLARWLRTAGHDVAMEPDGTAD-RRLIERAMAEERLLLTRDRSLLEIR--- 57
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISED---QLMSRCTKCNGRFIQKPLSTEEAVEAA 474
+V LL + L + ++ D Q SRC+ CN + AVE
Sbjct: 58 --GAQKVVLLLASNDLESSVRELTGRLGIDWLHQPFSRCSLCNTPLV--------AVER- 106
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEG 504
P L ++ W C C + YW G
Sbjct: 107 ------PADLPSDIVRAWFCTTCGKYYWRG 130
>gi|240254568|ref|NP_850189.5| RRP6-like protein 3 [Arabidopsis thaliana]
gi|330253588|gb|AEC08682.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 891
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TES + LA L++ + +D E Q S +S +L+Q++ E D
Sbjct: 124 TES-QLKELAEILAKEQVFAVDTE---QHSLRSFLGFTALIQISTH-------EED---- 168
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
FL+D +I L + +L+ +F P+I K+ D+I+L F
Sbjct: 169 ---FLVD--TIALHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDF------------- 210
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + ++++ ++ L K +SLA + + + ++ +K LQ DW RPL+EE
Sbjct: 211 -HIYVVNMFDTAKACEV---LSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVR 266
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSS 225
YA DAH L+ I + ++ Q SS
Sbjct: 267 YARTDAHYLLYIADSLTTELKQLATDSSS 295
>gi|402565026|ref|YP_006614371.1| hypothetical protein GEM_0218 [Burkholderia cepacia GG4]
gi|402246223|gb|AFQ46677.1| protein of unknown function DUF82 [Burkholderia cepacia GG4]
Length = 255
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F+ D + GLA+ LR G D + + EL+ ++E R +LTRD +LL+ + +++
Sbjct: 94 FVADAHLGGLAQLLRLAGFDTCYDNHYRDD--ELVALAAREGRTVLTRDRELLKRRAVVR 151
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
+ +QL E+ L + C +CN PL +A +AA
Sbjct: 152 GCYLHAQQ--PAEQLRELFARLDLA-PHMRPFRLCLRCNA-----PLHPLDAADAAP--- 200
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + ++ +F C C +++WEG+ +
Sbjct: 201 RVPAGVSQRHRRFAACDVCRRVFWEGSHW 229
>gi|153807650|ref|ZP_01960318.1| hypothetical protein BACCAC_01932 [Bacteroides caccae ATCC 43185]
gi|423217361|ref|ZP_17203857.1| hypothetical protein HMPREF1061_00630 [Bacteroides caccae
CL03T12C61]
gi|149130012|gb|EDM21224.1| 3'-5' exonuclease [Bacteroides caccae ATCC 43185]
gi|392628520|gb|EIY22546.1| hypothetical protein HMPREF1061_00630 [Bacteroides caccae
CL03T12C61]
Length = 214
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ S ES +A LSQ ++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIHVIQS-ESETEKAVAYLLSQP-ILGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +P I+K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTQP-----LVDLLENPGIIKVGLSLKDDFMMLHKRAPFNQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C D V R+ + KSL I L +SK + S+W
Sbjct: 121 QSCIELQDYV-------------------RQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ + GN
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKRTGN 196
>gi|444912820|ref|ZP_21232979.1| hypothetical protein D187_04915 [Cystobacter fuscus DSM 2262]
gi|444716513|gb|ELW57359.1| hypothetical protein D187_04915 [Cystobacter fuscus DSM 2262]
Length = 246
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL DV + LA LR +G D + L ++ E+R+LLTRD +L+ +
Sbjct: 96 PRFLLDVGLGRLASLLRMLGFDTVWRNDFADD--VLARRSRDEQRILLTRDLGVLKRSEV 153
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ Y + ++QL EV + L + + +RC CN + + E +G
Sbjct: 154 VHG--YFPRETDPSRQLPEVARRYGL-VPRMRPFTRCLACNTPLVGA------SPEEVRG 204
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
R+P+ + F C C +++W G+ +H ++ ID
Sbjct: 205 --RVPERVLATFSSFQHCPGCQRVFWAGS-HHERMRALID 241
>gi|404422522|ref|ZP_11004207.1| hypothetical protein MFORT_18797 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403656614|gb|EJZ11416.1| hypothetical protein MFORT_18797 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 248
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 356 YPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQY 415
+P+F+ DV + LA+ LR +G D S + + L D + ++R+LLTRD LL+ +
Sbjct: 96 HPRFVVDVNLGRLARLLRVLGFDVWW--SSAADDQTLADISLDQQRILLTRDRGLLKRRT 153
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ V S +Q LEV+ + +RC +CNG+ ++ E ++ +
Sbjct: 154 ITHGLF--VHSQHPEEQTLEVLRR-LDLRRRIKPFTRCVRCNGQL--AAVAKERVIDQLE 208
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R +D +F +C +C ++YW G+ +
Sbjct: 209 PLTR---RYYD---EFSRCPECGRIYWAGSHF 234
>gi|403371484|gb|EJY85623.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 1077
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 24/140 (17%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI--TSIYNHLH 149
+ + ++E+FV P I+K+ GCD + LDI ++++
Sbjct: 896 VAQYIQEIFVDPSIVKIF----------------HGCDSDIQILASDLDIFVVNLFDTAR 939
Query: 150 HKQLGRKLPK------ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
Q KLP+ + SL ++C + L I L K Q SDW RPL + +YA D+H
Sbjct: 940 AYQAIFKLPENAPKHVDLTSLESLCDKFLGIQLDKFFQVSDWRIRPLPQGMMDYARSDSH 999
Query: 204 CLIEIFNIFQVKVAQKGNSC 223
LI ++ IFQ + + NS
Sbjct: 1000 FLIPLYTIFQQILTGQINSV 1019
>gi|334184634|ref|NP_001189656.1| RRP6-like protein 3 [Arabidopsis thaliana]
gi|330253589|gb|AEC08683.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 872
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TES + LA L++ + +D E Q S +S +L+Q++ E D
Sbjct: 124 TES-QLKELAEILAKEQVFAVDTE---QHSLRSFLGFTALIQISTH-------EED---- 168
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
FL+D +I L + +L+ +F P+I K+ D+I+L F
Sbjct: 169 ---FLVD--TIALHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDF------------- 210
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + ++++ ++ L K +SLA + + + ++ +K LQ DW RPL+EE
Sbjct: 211 -HIYVVNMFDTAKACEV---LSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVR 266
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSS 225
YA DAH L+ I + ++ Q SS
Sbjct: 267 YARTDAHYLLYIADSLTTELKQLATDSSS 295
>gi|224538568|ref|ZP_03679107.1| hypothetical protein BACCELL_03462 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221874|ref|ZP_17208344.1| hypothetical protein HMPREF1062_00530 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224519812|gb|EEF88917.1| hypothetical protein BACCELL_03462 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645292|gb|EIY39021.1| hypothetical protein HMPREF1062_00530 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 215
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IHLV + E L + SL+G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIHLVQTPWEAE--KAVTYLKKYSLLGIDSETRPSFTKGQSH-KVALLQVSSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L SP + K+G + D + L + F
Sbjct: 73 -------EDCFLFRLNLTGLTLPII-----SLLESPSVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
C ++ Y+ + I + KSL I L +SK + S+W
Sbjct: 121 HSCI----ELQEYVRMFGI---------------QDKSLQKIYGILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAEHLTEPQKQYAATDAWACLNIYNRLQ 189
>gi|300697762|ref|YP_003748423.1| conserved protein of unknown function, DUF82 [Ralstonia
solanacearum CFBP2957]
gi|299074486|emb|CBJ54037.1| conserved protein of unknown function, DUF82 [Ralstonia
solanacearum CFBP2957]
Length = 255
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FLCD + A+ LR G D A + E + T E ++L+RD +LL+ + + +
Sbjct: 87 FLCDAHLGATARLLRMAGFDTAYDNNYADATIETLAHT--EDWIVLSRDRELLKRRGIRR 144
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
R + Q+ E++ F+L + SRC +CN PL A EAA
Sbjct: 145 GAFVRARE--PQAQMREIVARFRLA-EAARPFSRCLECNA-----PLRLLSAEEAAAS-- 194
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+P + ++ F C C ++YW G+ +
Sbjct: 195 -VPPRVRERQHLFSTCDVCRRVYWPGSHW 222
>gi|402220892|gb|EJU00962.1| ribonuclease H-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 338
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 34/186 (18%)
Query: 32 SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
SS +G D EW+P SL+QL DE N ++ + + P
Sbjct: 85 SSPLGFDTEWRPNYVKGGRENWTSLIQLG-----------DEHNILLIQISAMQYFP--- 130
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
E L+EL +P I+K+G + D L E L+ +S+ +
Sbjct: 131 --ESLRELLSNPAIVKVGVGIRGDAFKLHR--------------EQQLEFSSLLDLADFA 174
Query: 152 QL---GRKLPKETKSLANICKELLDISLSK-ELQCSDWSNRPLTEEQKNYAAIDAHCLIE 207
+L + P LA +C+ L+ +L K ++ S+W P+T+ ++YAA DAH +
Sbjct: 175 KLVDPDKWAPNRNPGLAALCETYLERTLKKGKITKSNWEMNPMTKAMQDYAANDAHVSFK 234
Query: 208 IFNIFQ 213
IF +
Sbjct: 235 IFRFLE 240
>gi|284161458|ref|YP_003400081.1| hypothetical protein Arcpr_0338 [Archaeoglobus profundus DSM 5631]
gi|284011455|gb|ADB57408.1| protein of unknown function DUF82 [Archaeoglobus profundus DSM
5631]
Length = 158
Score = 56.6 bits (135), Expect = 3e-05, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 26/168 (15%)
Query: 358 KFLCDVMVEGLAKHLRCVGID---AATPRSKKPEPRELIDQTSKEKRVLLTRD------A 408
KF+CD M++ LA LR G D A + E LI++ R+LLTRD A
Sbjct: 3 KFICDRMLKRLAIWLRLFGYDTLYAGDIEVEGDEDSFLINEF--RDRILLTRDRELYNRA 60
Query: 409 KLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTE 468
K +R +LI++ R++ LK ++L + ++L+ M RC+ CN ++KP S +
Sbjct: 61 KGIRPVFLIRSN--RLEEQLKELKVLGL--RYELR------MDRCSICNTP-LRKP-SDK 108
Query: 469 EAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
EA+E K + I + L +K + W C C +LYW G + N ++KF++
Sbjct: 109 EALEVMKR-EGIREDLREK-FELWYCERCKKLYWMGGHWRN-MKKFLE 153
>gi|402877950|ref|XP_003902671.1| PREDICTED: Werner syndrome ATP-dependent helicase [Papio anubis]
Length = 1373
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 35/190 (18%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
+LS +VG D EW P ++ +V+L+QL ES + + +S
Sbjct: 72 SLSDGDVVGFDMEWPPLY-NKGKLGKVALIQLCV----------SESKCYLFHISSMSVF 120
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
P + LK L + I K G + D L F DI +++ ++++T + N
Sbjct: 121 P-----QGLKMLLENKAIKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDVAN- 166
Query: 148 LHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+KL ET SL+ + K LL L K ++CS+WS PLTE+QK YAA DA+
Sbjct: 167 -------KKLKCTETWSLSGLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYA 219
Query: 205 LIEIFNIFQV 214
I+ ++
Sbjct: 220 GFIIYRNLEI 229
>gi|271968682|ref|YP_003342878.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270511857|gb|ACZ90135.1| protein of unknown function DUF82 [Streptosporangium roseum DSM
43021]
Length = 262
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 21/153 (13%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL DV + LA+ LR +G+DAA + +P L+ Q + E+RVLLTRD LLR + L
Sbjct: 109 PRFLLDVHLGTLARRLRLLGLDAAY-HNDMDDP-SLVVQANAERRVLLTRDRGLLRRRAL 166
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEA---VEA 473
R S + QL +++E F + + +RCT CNG P+ E +EA
Sbjct: 167 WLGAYVRGSS--PHDQLRDLLERFAPPL---RPWTRCTACNGEL--APVGKHEVERLLEA 219
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
G +R D + +C +C Q+YW G
Sbjct: 220 --GTRRTYDA-------YGRCPECGQIYWRGAH 243
>gi|402080291|gb|EJT75436.1| exosome complex exonuclease Rrp [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 834
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 20/138 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L ++F P ILK+ D+I+L D+G L + +++ H +
Sbjct: 295 EVLNQVFADPKILKVFHGAFMDIIWLQR-------DLG-------LYVVGLFDTFHAAEA 340
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L +KSLA + K+ D K Q +DW RPL++E YA D H L+ ++++ +
Sbjct: 341 ---LLYPSKSLAYLLKKFADFEADKRFQMADWRIRPLSKEMLYYARSDTHYLLYVYDMMR 397
Query: 214 ---VKVAQKGNSCSSISE 228
VK +++G+ + E
Sbjct: 398 NELVKQSRRGDPDGDLVE 415
>gi|113866279|ref|YP_724768.1| hypothetical protein H16_A0248 [Ralstonia eutropha H16]
gi|113525055|emb|CAJ91400.1| uncharacterized conserved protein [Ralstonia eutropha H16]
Length = 252
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + RV+LTRD +LL+ + I
Sbjct: 97 RFVADAHLGGLAHLLRMTGFD--TLYDNHFEDSEIERIAVDQGRVVLTRDRELLKRRG-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V+++ Q+ E+ L S + S C CN PL + +A AA
Sbjct: 154 THGCY-VRAIKSQLQVREIFARLDLARSA-RPFSLCLDCNA-----PLRSLDAAGAAG-- 204
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + +++ F C C +++WEG+ +
Sbjct: 205 -RVPQGVLERHRSFVTCDQCRRVFWEGSHW 233
>gi|76801078|ref|YP_326086.1| hypothetical protein NP0852A [Natronomonas pharaonis DSM 2160]
gi|76556943|emb|CAI48517.1| DUF82 family protein [Natronomonas pharaonis DSM 2160]
Length = 159
Score = 56.2 bits (134), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQYL 416
+ L DVM+ LA +LRC G D + E + L + + E RVL+TRD +L +
Sbjct: 13 RLLLDVMLGKLAVYLRCCGYDTVYAGDRDIEADDRLRELAATEGRVLITRDTELAAR--V 70
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ + + + QL E+ E ++++ D+ +RC +CNG +P+ +E
Sbjct: 71 DRGLLLGTRDV--EAQLSELHE-MGVELTVDERPTRCGRCNGHL--EPVGADEPTPEYAP 125
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
DC W+C C Q++W+G+ + + +V
Sbjct: 126 DSAGTDC--------WRCHACEQVFWKGSHWERMQETIANV 158
>gi|406862035|gb|EKD15087.1| putative exosome complex exonuclease Rrp6 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 804
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 35/194 (18%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L ++S + +D E QRS+ VSL+Q++ + E D +++D + P
Sbjct: 259 LKEASEIAIDLEHHDQRSYVG---LVSLMQISTR-------EKD-------WIVD-TLKP 300
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
++L E+F P I+K+ D+++L D+G L + +++
Sbjct: 301 WRQNLQVLNEVFADPKIIKVFHGAFMDIVWLQR-------DLG-------LYVVGLFD-T 345
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
HH R L SLA + K+ +D K+ Q +DW RPL E YA D H L+ I
Sbjct: 346 HHA--SRALGYSGASLAFLLKKFIDFDADKQYQMADWRIRPLPAEMFFYARADTHFLLYI 403
Query: 209 FNIFQVKVAQKGNS 222
F++ + ++ + NS
Sbjct: 404 FDMVRNELIDRSNS 417
>gi|209517355|ref|ZP_03266198.1| protein of unknown function DUF82 [Burkholderia sp. H160]
gi|209502238|gb|EEA02251.1| protein of unknown function DUF82 [Burkholderia sp. H160]
Length = 269
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D E + + ++R++LTRD +LL+ + I
Sbjct: 114 RFIADAHLGGLAPLLRLAGFDTLYDNHFPDADIEAL--AAAQQRIVLTRDRELLKRRN-I 170
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L +QL EV E L S Q C CN PL EA
Sbjct: 171 THGCY-VRALRPREQLREVFERLDLARSA-QPFRLCLVCNA-----PLRRIAREEAGP-- 221
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + ++ +F C C +++WEGT +
Sbjct: 222 -RVPHGVLQRHSRFVTCDVCGRVFWEGTHW 250
>gi|53712323|ref|YP_098315.1| hypothetical protein BF1031 [Bacteroides fragilis YCH46]
gi|60680496|ref|YP_210640.1| 3'-5' exonuclease [Bacteroides fragilis NCTC 9343]
gi|336408541|ref|ZP_08589032.1| hypothetical protein HMPREF1018_01047 [Bacteroides sp. 2_1_56FAA]
gi|375357352|ref|YP_005110124.1| putative 3'-5' exonuclease [Bacteroides fragilis 638R]
gi|383117263|ref|ZP_09938009.1| hypothetical protein BSHG_0617 [Bacteroides sp. 3_2_5]
gi|423248984|ref|ZP_17230000.1| hypothetical protein HMPREF1066_01010 [Bacteroides fragilis
CL03T00C08]
gi|423256706|ref|ZP_17237634.1| hypothetical protein HMPREF1067_04278 [Bacteroides fragilis
CL03T12C07]
gi|423258685|ref|ZP_17239608.1| hypothetical protein HMPREF1055_01885 [Bacteroides fragilis
CL07T00C01]
gi|423264343|ref|ZP_17243346.1| hypothetical protein HMPREF1056_01033 [Bacteroides fragilis
CL07T12C05]
gi|423269089|ref|ZP_17248061.1| hypothetical protein HMPREF1079_01143 [Bacteroides fragilis
CL05T00C42]
gi|423273350|ref|ZP_17252297.1| hypothetical protein HMPREF1080_00950 [Bacteroides fragilis
CL05T12C13]
gi|423281785|ref|ZP_17260670.1| hypothetical protein HMPREF1204_00208 [Bacteroides fragilis HMW
615]
gi|52215188|dbj|BAD47781.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|60491930|emb|CAH06690.1| putative 3'-5' exonuclease [Bacteroides fragilis NCTC 9343]
gi|251947416|gb|EES87698.1| hypothetical protein BSHG_0617 [Bacteroides sp. 3_2_5]
gi|301162033|emb|CBW21577.1| putative 3'-5' exonuclease [Bacteroides fragilis 638R]
gi|335935762|gb|EGM97710.1| hypothetical protein HMPREF1018_01047 [Bacteroides sp. 2_1_56FAA]
gi|387776265|gb|EIK38365.1| hypothetical protein HMPREF1055_01885 [Bacteroides fragilis
CL07T00C01]
gi|392648705|gb|EIY42393.1| hypothetical protein HMPREF1067_04278 [Bacteroides fragilis
CL03T12C07]
gi|392656531|gb|EIY50169.1| hypothetical protein HMPREF1066_01010 [Bacteroides fragilis
CL03T00C08]
gi|392702398|gb|EIY95544.1| hypothetical protein HMPREF1079_01143 [Bacteroides fragilis
CL05T00C42]
gi|392706609|gb|EIY99732.1| hypothetical protein HMPREF1056_01033 [Bacteroides fragilis
CL07T12C05]
gi|392707951|gb|EIZ01064.1| hypothetical protein HMPREF1080_00950 [Bacteroides fragilis
CL05T12C13]
gi|404582826|gb|EKA87517.1| hypothetical protein HMPREF1204_00208 [Bacteroides fragilis HMW
615]
Length = 216
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ TES +A SQ+ ++G+D+E +P + + + +V+LLQ++
Sbjct: 21 PGRIHVI-QTESEAQKAVAYLQSQA-ILGIDSETRPSFT-KGHSHKVALLQIS------- 70
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
SDE +F L+++ + P I EL P ++K+G K D + L + F
Sbjct: 71 ---SDE--CCFLFRLNMTGLTQPII-----ELLEDPKVIKVGLSLKDDFMMLHKRAPFNQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + ++ R + KSL I L +SK + S+W
Sbjct: 121 QAC-------------------IELQEYVRPFGIQDKSLQKIYGILFSEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
LT+ QK YAA DA + I+++ + ++ + GN
Sbjct: 162 EADVLTDAQKQYAATDAWACLNIYHLLE-ELKRTGN 196
>gi|322369246|ref|ZP_08043811.1| hypothetical protein ZOD2009_07154 [Haladaptatus paucihalophilus
DX253]
gi|320550978|gb|EFW92627.1| hypothetical protein ZOD2009_07154 [Haladaptatus paucihalophilus
DX253]
Length = 144
Score = 56.2 bits (134), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 23/154 (14%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQYL 416
+F DVM+ L+ +LR G DAA + E + +++ E R L+TRD +L
Sbjct: 4 RFFLDVMLGSLSTYLRMCGYDAAYALDRGVEADDAILELAGTEDRTLVTRDVQLAER--- 60
Query: 417 IKNQIYRVKSLLKNQQLLEVI-EAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ + ++SL QL E+ + L +SE +RC+ CNG+ ++ + K
Sbjct: 61 -ADDAFLIESLDVRDQLRELRNDGVNLSLSEP---ARCSSCNGKLVRDDGPAPDHAPDGK 116
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
W+C DC + +W+G+ + +
Sbjct: 117 --------------PVWRCRDCGKRFWKGSHWES 136
>gi|337283997|ref|YP_004623471.1| hypothetical protein PYCH_05090 [Pyrococcus yayanosii CH1]
gi|334899931|gb|AEH24199.1| hypothetical protein PYCH_05090 [Pyrococcus yayanosii CH1]
Length = 154
Score = 56.2 bits (134), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 17/158 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D+M+ LA+ LR G D + +++ E+R++LTRD+ L +
Sbjct: 3 KFIADMMLGRLARWLRLYGYDTLYGVE---DDDDILRIARAEQRIILTRDSGLAERASRL 59
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM---SRCTKCNGRFIQKPLSTEEAVEAA 474
+ +++ +Q+ ++ E + ++L +RC KCNG KP EE
Sbjct: 60 GIPVILIRANSLEEQVAQLREE---GVEFEELFPAGARCPKCNGPI--KPTRKEEV---- 110
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
+G ++P +++ +F+ C C Q+YW G Q+ V+
Sbjct: 111 RG--KVPPSVYEAYDEFYVCESCGQIYWPGRQWREIVK 146
>gi|17549330|ref|NP_522670.1| hypothetical protein RS02617 [Ralstonia solanacearum GMI1000]
gi|17431582|emb|CAD18260.1| hypothetical protein of unknown function duf82 [Ralstonia
solanacearum GMI1000]
Length = 257
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FLCD + A+ LR G D A + E + T E ++L+RD +LL+ + + +
Sbjct: 87 FLCDAHLGATARLLRMAGFDTAYDNNYADATIEALADT--EDWIVLSRDRELLKRRGIRR 144
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
R + Q+ E++ F+L + + SRC +CN PL A EAA
Sbjct: 145 GAFIRARE--PQAQMREIVARFRLAEAA-RPFSRCLECNA-----PLRLLSAEEAAAS-- 194
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+P + ++ F C C ++YW G+ +
Sbjct: 195 -VPPRVRERQHLFSTCDVCRRVYWPGSHW 222
>gi|300694132|ref|YP_003750105.1| hypothetical protein RPSI07_mp1150 [Ralstonia solanacearum PSI07]
gi|299076169|emb|CBJ35482.1| conserved hypothethical protein, DUF82 [Ralstonia solanacearum
PSI07]
gi|344167601|emb|CCA79840.1| conserved hypothethical protein, DUF82 [blood disease bacterium
R229]
Length = 255
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FLCD + A+ LR G D A + E + T E ++L+RD +LL+ + + +
Sbjct: 87 FLCDAHLGATARLLRMAGFDTAYDNNYADATIEALAHT--EDWIVLSRDRELLKRRGIRR 144
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
R + Q+ E++ F+L + SRC +CN PL A EAA
Sbjct: 145 GAFIRARE--PQAQMREIVARFKLA-EAARPFSRCLECNA-----PLRLLSADEAAAS-- 194
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+P + ++ F C C ++YW G+ +
Sbjct: 195 -VPPRVRERQHLFSTCDVCRRVYWPGSHW 222
>gi|110667191|ref|YP_657002.1| hypothetical protein HQ1221A [Haloquadratum walsbyi DSM 16790]
gi|109624938|emb|CAJ51350.1| DUF82 family protein [Haloquadratum walsbyi DSM 16790]
Length = 183
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 39/176 (22%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAA------------------------TPRSKKPEPRELI 393
+FL D M+ L+ +LR G DAA +P S+ E++
Sbjct: 10 RFLLDAMLGSLSTYLRMCGHDAACVLDITPDREVEEDRDTINIDTTPSPSSRGLTDDEIL 69
Query: 394 DQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRC 453
S EKR +LTRD +L + + + + + QL E + ++ +SRC
Sbjct: 70 AHASSEKRAILTRDTELAQR----ADDVVLLTARDVEDQLHE-LATIGYDLTLRPRLSRC 124
Query: 454 TKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
CNGR + LS++ V DC WQC+ C Q++W+G+ + +
Sbjct: 125 GACNGRV--ESLSSDVVVPEYAPDPSEKDC--------WQCLRCEQIFWKGSHWDD 170
>gi|114619614|ref|XP_528104.2| PREDICTED: Werner syndrome ATP-dependent helicase [Pan troglodytes]
Length = 1432
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|86158027|ref|YP_464812.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774538|gb|ABC81375.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-C]
Length = 294
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R+L + L+ + + + LSK Q SDW RPLT +Q YAA+D H L+ +F++
Sbjct: 115 ARRLGRPGLGLSALVESHFGVRLSKAFQRSDWGRRPLTPDQLAYAALDTHFLLPLFDLLT 174
Query: 214 VKVAQKG 220
++A +G
Sbjct: 175 GELAARG 181
>gi|306921707|dbj|BAJ17933.1| Werner syndrome, RecQ helicase-like [synthetic construct]
Length = 1432
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|296171911|ref|ZP_06852975.1| ribonuclease D [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295893910|gb|EFG73681.1| ribonuclease D [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 430
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL EE NYAA+D LIE+
Sbjct: 140 GRLAGFERVNLATMVERLLGSGLAKGHGAADWSKRPLPEEWLNYAALDVELLIELRGAIA 199
Query: 214 VKVAQKGNSCSSISELD 230
+AQ+G + + E D
Sbjct: 200 DVLAQQGKTGWAAEEFD 216
>gi|160892403|gb|ABX52081.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 892
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 44/235 (18%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TES + LA L++ + +D E Q S +S +L+Q++ E D
Sbjct: 124 TES-QLKELAEILAKEQVFAVDTE---QHSLRSFLGFTALIQISTH-------EED---- 168
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
FL+D +I L + +L+ +F P+I K+ D+I+L F
Sbjct: 169 ---FLVD--TIALHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDF------------- 210
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + ++++ ++ L K +SLA + + + ++ +K LQ DW RPL+EE
Sbjct: 211 -HIYVVNMFDTAKACEV---LSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVR 266
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKT 251
YA DAH L+ I + ++ Q ++ DSS+ D +LE N T
Sbjct: 267 YARTDAHYLLYIADSLTTELKQ-------LATEDSSSPDDRFHFLLEASRRSNMT 314
>gi|407276826|ref|ZP_11105296.1| hypothetical protein RhP14_10004 [Rhodococcus sp. P14]
Length = 248
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 391 ELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM 450
EL S +R+LLTRD LL + + L +Q++EV+ L +
Sbjct: 129 ELARIGSAHQRILLTRDRGLLERREITHGLFVHADRPL--EQIVEVVRRLDLG-ARFAPF 185
Query: 451 SRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNA 510
+RC +CNGR + +S EE ++ + R +D +F +C DC ++YW G+ + N
Sbjct: 186 TRCLRCNGRLVA--VSKEEVLDQLEPLTR---RFYD---EFSRCTDCGRIYWAGSHHRNL 237
Query: 511 V 511
V
Sbjct: 238 V 238
>gi|421898828|ref|ZP_16329194.1| protein of unknown function duf82 [Ralstonia solanacearum MolK2]
gi|206590034|emb|CAQ36995.1| protein of unknown function duf82 [Ralstonia solanacearum MolK2]
Length = 255
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FLCD + A+ LR G D A + E + T E ++L+RD +LL+ + + +
Sbjct: 87 FLCDAHLGATARLLRMAGFDTAYDNNYADATIEALADT--EDWIVLSRDRELLKRRGIRR 144
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
R + Q+ E++ F+L + + SRC +CN + LS EEA +
Sbjct: 145 GAFVRARE--PQAQMREIVARFKLAEAA-RPFSRCLECNAPL--RLLSAEEAASS----- 194
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+P + ++ F C C ++YW G+ +
Sbjct: 195 -VPPRVRERQHLFSTCDVCRRVYWPGSHW 222
>gi|440907539|gb|ELR57678.1| Werner syndrome ATP-dependent helicase [Bos grunniens mutus]
Length = 1430
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + RV+L+QL ES + + +
Sbjct: 67 ISMSLSDGDVVGFDIEWPPAYK-KGTLSRVALIQLCVA----------ESKCYLFHISSM 115
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G +QD L F DI + +++T +
Sbjct: 116 SGFP-----QGLKMLLENEAIKKAGVGIEQDQWKLLRDF-----DINLKSI---VELTDV 162
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CS+WS PLTE+QK YAA D
Sbjct: 163 ANE--------KLKCIETWSLNGLVKYLFGKQLLKDRSIRCSNWSRFPLTEDQKVYAATD 214
Query: 202 AHCLIEIF 209
A+ I+
Sbjct: 215 AYAGFIIY 222
>gi|332240842|ref|XP_003269596.1| PREDICTED: Werner syndrome ATP-dependent helicase [Nomascus
leucogenys]
Length = 1433
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLY-NKGKLGKVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|393786954|ref|ZP_10375086.1| hypothetical protein HMPREF1068_01366 [Bacteroides nordii
CL02T12C05]
gi|392658189|gb|EIY51819.1| hypothetical protein HMPREF1068_01366 [Bacteroides nordii
CL02T12C05]
Length = 215
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IH++ S + E L S++G+D+E +P + + +V+LLQ++
Sbjct: 24 IHVIQSEK--EADKAVAYLQAQSVLGIDSETRPSFTKGQSH-KVALLQISS--------- 71
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQGC 128
+ +F L+++ + PS+ LL+ +P+++K+G + D + L + F QGC
Sbjct: 72 ---NECCFLFRLNMTGLT-PSLIGLLE----NPEVIKVGLSLRDDFMMLHKRAPFTQQGC 123
Query: 129 DIGFDRVEPY--LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWS 186
D V P+ LD KSL I L +SK + S+W
Sbjct: 124 VELQDYVRPFGILD---------------------KSLQKIYGILFKEKISKSQRLSNWE 162
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
LT+ QK YAA DA + I+N+ + ++ GN
Sbjct: 163 ADVLTDAQKQYAATDAWACLHIYNLLE-ELKHTGN 196
>gi|397521446|ref|XP_003830806.1| PREDICTED: Werner syndrome ATP-dependent helicase [Pan paniscus]
Length = 1405
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|189467792|ref|ZP_03016577.1| hypothetical protein BACINT_04184 [Bacteroides intestinalis DSM
17393]
gi|189436056|gb|EDV05041.1| 3'-5' exonuclease [Bacteroides intestinalis DSM 17393]
Length = 210
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L Q L+G+D+E +P + + +V+LLQ++
Sbjct: 21 PGQIHMVQTPWEAE--KAVTYLKQYPLLGIDSETRPSFTKGQSH-KVALLQVSS------ 71
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
E D +F L+L+ + LP I L SP + K+G + D + L + F
Sbjct: 72 --EKD----CFLFRLNLTGLTLPII-----SLLESPSVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ C + ++ R + KSL I L +SK + S+W
Sbjct: 121 RAC-------------------IELQEYVRMFGIQDKSLQKIYGILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAEHLTEPQKQYAATDAWACLNIYNRLQ 189
>gi|83745680|ref|ZP_00942738.1| Zinc finger protein [Ralstonia solanacearum UW551]
gi|83727757|gb|EAP74877.1| Zinc finger protein [Ralstonia solanacearum UW551]
Length = 277
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FLCD + A+ LR G D A + E + T E ++L+RD +LL+ + + +
Sbjct: 109 FLCDAHLGATARLLRMAGFDTAYDNNYADATIEALADT--EDWIVLSRDRELLKRRGIRR 166
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
R + Q+ E++ F+L + SRC +CN + LS EEA +
Sbjct: 167 GAFVRARE--PQAQMREIVARFKLA-EAARPFSRCLECNAPL--RLLSAEEAASS----- 216
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+P + ++ F C C ++YW G+ +
Sbjct: 217 -VPPRVRERQHLFSTCDVCRRVYWPGSHW 244
>gi|119583830|gb|EAW63426.1| Werner syndrome, isoform CRA_c [Homo sapiens]
Length = 1406
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|119583828|gb|EAW63424.1| Werner syndrome, isoform CRA_a [Homo sapiens]
Length = 1405
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|390368374|ref|XP_003731440.1| PREDICTED: exosome component 10-like, partial [Strongylocentrotus
purpuratus]
Length = 776
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L+R+L QS + +D E S++S L+Q+ S A +++D
Sbjct: 130 LSRSLKQSKEIAVDLE---HHSYRSYLGFTCLMQI--------------STAEHDYVVD- 171
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
++ L S ++L + F P I+K+ G ++ FD ++ L + +
Sbjct: 172 -TLELRSELQMLNDAFTDPKIVKV----------------FHGANMDFDWLQRDLGLY-V 213
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
N Q R L SLA++ + K+ Q +DW RPL EE +YA D H
Sbjct: 214 VNMFDTHQASRSLGFPHHSLASLLSRYCQVEADKQYQLADWRIRPLPEEMLHYAREDTHY 273
Query: 205 LIEIFNIFQVKVAQKGN 221
L+ I++ + ++ ++GN
Sbjct: 274 LLYIYHTMKNELIKRGN 290
>gi|110735439|ref|NP_000544.2| Werner syndrome ATP-dependent helicase [Homo sapiens]
gi|322510082|sp|Q14191.2|WRN_HUMAN RecName: Full=Werner syndrome ATP-dependent helicase; AltName:
Full=DNA helicase, RecQ-like type 3; Short=RecQ3;
AltName: Full=Exonuclease WRN; AltName: Full=RecQ
protein-like 2
gi|37953299|gb|AAR05448.1| Werner syndrome [Homo sapiens]
Length = 1432
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|207739479|ref|YP_002257872.1| protein of unknown function duf82 [Ralstonia solanacearum IPO1609]
gi|206592856|emb|CAQ59762.1| protein of unknown function duf82 [Ralstonia solanacearum IPO1609]
Length = 255
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FLCD + A+ LR G D A + E + T E ++L+RD +LL+ + + +
Sbjct: 87 FLCDAHLGATARLLRMAGFDTAYDNNYADATIEALADT--EDWIVLSRDRELLKRRGIRR 144
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
R + Q+ E++ F+L + + SRC +CN + LS EEA +
Sbjct: 145 GAFVRARE--PQAQMREIVARFKLAEAA-RPFSRCLECNAPL--RLLSAEEAASS----- 194
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+P + ++ F C C ++YW G+ +
Sbjct: 195 -VPPRVRERQHLFSTCDVCRRVYWPGSHW 222
>gi|339252698|ref|XP_003371572.1| exosome component 10 [Trichinella spiralis]
gi|316968157|gb|EFV52483.1| exosome component 10 [Trichinella spiralis]
Length = 827
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
Query: 88 PLPSIWE---LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
P P IW +L E FV P+I+K+ QD+ +L F + + ++
Sbjct: 307 PFP-IWHEMYILNEPFVDPNIVKVMHGSSQDIQWLQRDFG--------------IYVVNL 351
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
++ H ++ L +SL + KEL+ ++L K Q +DW RPL + YA D+H
Sbjct: 352 FDTYHAMEV---LEMPQRSLKFLVKELVGVNLDKSYQTADWRIRPLGSKMLAYARSDSHY 408
Query: 205 LIEIFNIFQVKVAQKGNSCSSI 226
L+ +++ + ++ +GN + +
Sbjct: 409 LLYCWDVLRNQLLNRGNEYNDL 430
>gi|436735997|ref|YP_007318125.1| DNA-directed DNA polymerase [Gloeocapsa sp. PCC 7428]
gi|428267598|gb|AFZ33542.1| DNA-directed DNA polymerase [Gloeocapsa sp. PCC 7428]
Length = 598
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 53/236 (22%)
Query: 27 RALSQSSLVGLDAE---WKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD 83
+A+ ++L G+D E P+R R+ L+Q+A P R V L+D
Sbjct: 31 KAIQSTALFGIDCETTGLDPKRD------RLRLVQIAV-PHAR------------VLLID 71
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
L +I P + L++L SP LK+G K + +L+ G P+ D T
Sbjct: 72 LFAIA-PKHLKPLRQLLNSPA-LKIGHNLKFEWQFLTQA--------GLGLAHPFFD-TQ 120
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
+ + + KL SL ++ +LL + L+K LQ S+++ LT +Q YAAIDA
Sbjct: 121 LAYRIWSAGIKTKL-----SLKSVASKLLGVKLNKSLQHSNFAQAELTSQQLRYAAIDAA 175
Query: 204 CLIEIFNIFQ--------VKVAQKGNSCSSIS---ELDSSNLDL----GLKGILEK 244
L++++ I ++VA+ SC ++ EL+ LDL G LEK
Sbjct: 176 ILLDLYPILHGRLKQSQLLEVARLEFSCIPVTAQMELNGMLLDLSRWQGYGASLEK 231
>gi|1280208|gb|AAC41981.1| unnamed protein product [Homo sapiens]
gi|3719421|gb|AAC63361.1| WRN [Homo sapiens]
gi|6272686|gb|AAF06162.1| WRN [Homo sapiens]
gi|60461921|gb|AAX21098.1| Werner syndrome helicase [Homo sapiens]
Length = 1432
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|386335887|ref|YP_006032057.1| Zinc finger protein [Ralstonia solanacearum Po82]
gi|334198337|gb|AEG71521.1| Zinc finger protein [Ralstonia solanacearum Po82]
Length = 287
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FLCD + A+ LR G D A + E + T E ++L+RD +LL+ + + +
Sbjct: 119 FLCDAHLGATARLLRMAGFDTAYDNNYPDATIEALADT--EDWIVLSRDRELLKRRGIRR 176
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
R + Q+ E++ F+L + SRC +CN PL A EAA
Sbjct: 177 GAFVRARE--PQAQMREIVARFRLA-EAARPFSRCLECNA-----PLRLLSAEEAAAS-- 226
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+P + ++ F C C ++YW G+ +
Sbjct: 227 -VPPRVRERQHLFSTCDVCRRVYWPGSHW 254
>gi|167589564|ref|ZP_02381952.1| hypothetical protein BuboB_29798 [Burkholderia ubonensis Bu]
Length = 247
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 343 GPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRV 402
PP W +F+ D + GLA+ LR G D T E+ +++ R+
Sbjct: 89 APPDW----------RFVADAHLGGLAQLLRLAGFD--TCYDNHFSDDEIAVLAARDGRI 136
Query: 403 LLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQ 462
+LTRD +LL+ + + + + +L QL E+ L + C +CN
Sbjct: 137 VLTRDRELLKRRAVARGCY--LHALQPAAQLRELFARLDLA-PHMRPFRLCLRCNAPL-- 191
Query: 463 KPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
PLS E+A R+PD + + +F C C +++WEG+ +
Sbjct: 192 HPLSAEDAA------LRVPDGVRQHHRRFAACDVCQRVFWEGSHW 230
>gi|412985318|emb|CCO20343.1| predicted protein [Bathycoccus prasinos]
Length = 422
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 37/213 (17%)
Query: 2 DCTYRKPLKIHLVTSTESPEFTHLARALSQS------------SLVGLDAEWKPQRSHQS 49
+ T+ P KI LV+ S HL+ L + +++G D E +P S +
Sbjct: 8 NSTFVSPSKI-LVSYDPSTANEHLSELLKEKDITRSVESRHRYAVIGFDTETRPTFSKVA 66
Query: 50 NFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLG 109
+V+L+Q A + +V L+ L+S+ + E++ ++ + + LG
Sbjct: 67 KKNKVALVQFASK--------------NVACLIHLASMN-GKVPEMMTKILREKEYVLLG 111
Query: 110 FKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICK 169
F K DL L + D V ++D+ +I H++ G K +AN
Sbjct: 112 FGIKTDLKELKTEHYGNEDKESVD-VNAFIDLATISEVFKHERPG------MKGMANHFG 164
Query: 170 ELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
LD+ K +Q S+W N PL E Q YAA DA
Sbjct: 165 --LDVEKPKAVQISNWENSPLREGQVKYAAEDA 195
>gi|325297843|ref|YP_004257760.1| 3'-5' exonuclease [Bacteroides salanitronis DSM 18170]
gi|324317396|gb|ADY35287.1| 3'-5' exonuclease [Bacteroides salanitronis DSM 18170]
Length = 210
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 35/219 (15%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
V TES E R L+ S+VG+D E +P + +V+LLQ+A
Sbjct: 26 FVIYTES-EARKAVRYLNTHSVVGVDTETRPS-FKRGTVHKVALLQIATH---------- 73
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
FL L+ + LP + L+E F+ ++LK+G + D L D +
Sbjct: 74 ----DTCFLFRLNHLGLP---DFLEE-FLQNNVLKVGLSLRDDFAMLRKRNQGDPRDGNW 125
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
++ Y+ I E KSL I L +SK + S+W LTE
Sbjct: 126 IELQDYVPRFGI---------------EEKSLQKIYALLFGKKISKTQRLSNWEADVLTE 170
Query: 193 EQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDS 231
Q+ YAA DA +EI+ + + + E D+
Sbjct: 171 AQQLYAATDAWACVEIYTYLEELRSHGNYQVEKVEEADA 209
>gi|357116782|ref|XP_003560156.1| PREDICTED: uncharacterized protein LOC100837522 [Brachypodium
distachyon]
Length = 909
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ HLA+ LS + +D E Q S +S +L+Q++ Q + D +
Sbjct: 152 QLEHLAKLLSDEEVFAVDTE---QHSLRSFLGYTALVQISTQ-------KED-------Y 194
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L +L+ +F SP I K+ D+++L F ++
Sbjct: 195 LID--TIALHDAMGILRPVFSSPSICKIFHGADNDVLWLQRDF--------------HIY 238
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ +I++ ++ L K KSLA + + ++ K +Q DW RPLT E YA
Sbjct: 239 VVNIFDTAKACEV---LSKPQKSLAYLLEIYCGVTTDKTMQREDWRVRPLTPEMVEYARS 295
Query: 201 DAHCLIEIFNIFQVKVAQKG 220
DAH L++I N ++ K
Sbjct: 296 DAHYLLKIANCLASELHAKA 315
>gi|197122666|ref|YP_002134617.1| 3'-5' exonuclease [Anaeromyxobacter sp. K]
gi|196172515|gb|ACG73488.1| 3'-5' exonuclease [Anaeromyxobacter sp. K]
Length = 288
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R+L + L+ + + + LSK Q SDW RPLT +Q YAA+D H L+ +F++
Sbjct: 111 ARRLGRPGLGLSALVEAHFGVRLSKAFQRSDWGRRPLTPDQLAYAALDTHFLLPLFDLLT 170
Query: 214 VKVAQKG 220
++A +G
Sbjct: 171 GELATRG 177
>gi|119583829|gb|EAW63425.1| Werner syndrome, isoform CRA_b [Homo sapiens]
Length = 1436
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|332025467|gb|EGI65632.1| Exonuclease 3'-5' domain-containing protein 2 [Acromyrmex
echinatior]
Length = 606
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 84/189 (44%), Gaps = 44/189 (23%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
++G D EW + VSLLQLA G ++ L + I I
Sbjct: 95 GVLGFDCEWVKEGP-------VSLLQLATYNG-------------LIALFRIGKIGY--I 132
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
LKEL S ILK+G +D + + GC RV LD+ ++ + +
Sbjct: 133 PPKLKELLASKHILKVGISSFEDGHKIVKDY---GC-----RVNGTLDLRTLAENFN--- 181
Query: 153 LGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
LP KSLA +C E L+I + K E++C DW LT+EQ YAA DA + +++
Sbjct: 182 ----LPSR-KSLAAMCLEYLNIEMDKIIEVRCGDWDASTLTDEQVAYAACDALASVIVYH 236
Query: 211 IFQVKVAQK 219
K+ QK
Sbjct: 237 ----KIMQK 241
>gi|74196546|dbj|BAE34397.1| unnamed protein product [Mus musculus]
Length = 265
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 48/250 (19%)
Query: 13 LVTSTESPEFTHLAR----ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
+V S E+ + + L+ LS +VG D EW P RV+++QL
Sbjct: 47 IVYSYEASDCSFLSEDISMRLSDGDVVGFDMEWPPIYKPGKR-SRVAVIQLCVS------ 99
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
E+ + + +S P + LK L + I K G + D L F
Sbjct: 100 ----ENKCYLFHISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF----- 145
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDW 185
D+ ++E ++++T + N KL ET SL + K +L L K ++CS+W
Sbjct: 146 DV---KLESFVELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNW 194
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGIL--- 242
SN PLTE+QK YAA DA+ + I+ K+ G++ + NL L +K L
Sbjct: 195 SNFPLTEDQKLYAATDAYAGLIIYQ----KLGNLGDTVQVFALNKEENLPLEMKKQLNLI 250
Query: 243 --EKPDIGNK 250
E D+ N+
Sbjct: 251 SEEMRDLANR 260
>gi|440475179|gb|ELQ43880.1| exosome complex exonuclease RRP6 [Magnaporthe oryzae Y34]
gi|440487108|gb|ELQ66914.1| exosome complex exonuclease RRP6 [Magnaporthe oryzae P131]
Length = 854
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F P I+K+ D+++L D+G L + +++ H +
Sbjct: 320 EILNEVFADPSIVKVFHGAFMDIVWLQR-------DLG-------LYVVGLFDTFHAAE- 364
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L +KSLA + K+ +D K Q +DW RPL EE YA D H L+ ++++ +
Sbjct: 365 --ALMYPSKSLAYLLKKFVDFEADKRYQTADWRIRPLPEEMLYYARSDTHYLLYVYDMMR 422
>gi|74142907|dbj|BAE42489.1| unnamed protein product [Mus musculus]
Length = 862
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL ES +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCVS----------ESKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVAN--------EKLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|303286635|ref|XP_003062607.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456124|gb|EEH53426.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 720
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R+ ++ L+++ + +L L K + SDWS RPLTE Q++YAA+DA L+E+ + +
Sbjct: 649 RRRARDAVGLSHVARVVLGKPLDKSTRMSDWSARPLTERQRHYAALDAWVLVEVMRVLR 707
>gi|29349740|ref|NP_813243.1| hypothetical protein BT_4332 [Bacteroides thetaiotaomicron
VPI-5482]
gi|298384013|ref|ZP_06993574.1| 3'-5' exonuclease domain protein [Bacteroides sp. 1_1_14]
gi|383120679|ref|ZP_09941404.1| hypothetical protein BSIG_2318 [Bacteroides sp. 1_1_6]
gi|29341650|gb|AAO79437.1| 3'-5' exonuclease-like protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840275|gb|EES68357.1| hypothetical protein BSIG_2318 [Bacteroides sp. 1_1_6]
gi|298263617|gb|EFI06480.1| 3'-5' exonuclease domain protein [Bacteroides sp. 1_1_14]
Length = 216
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 44/217 (20%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSS-LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPR 66
P +IH++ S T A A QS ++G+D+E +P + + +V+LLQ++
Sbjct: 21 PGRIHVIQSEAE---TEKAVAYLQSQPILGIDSETRPSFTKGQSH-KVALLQIS------ 70
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFC 124
SDE +F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 71 ----SDE--CCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFT 119
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
Q C + + R+ + KSL I L +SK + S+
Sbjct: 120 QQSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSN 160
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
W L++ QK YAA DA + I+N+ Q ++ + GN
Sbjct: 161 WEADVLSDGQKQYAATDAWACLNIYNLLQ-ELKRTGN 196
>gi|403253698|ref|ZP_10919999.1| hypothetical protein EMP_08002 [Thermotoga sp. EMP]
gi|402811232|gb|EJX25720.1| hypothetical protein EMP_08002 [Thermotoga sp. EMP]
Length = 164
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F D + LAK LR +G+D S+ EP +++ KE R+LLT+ L+
Sbjct: 5 RFAVDASLVPLAKKLRTLGLDVMVCYSE--EPGKVLLICRKEGRILLTKRPSLIEFFEKY 62
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+++ +K + L V+E F+LK +RC CN + P EE +E
Sbjct: 63 GQEVFYIKD---EKDLKMVVEHFKLKPER----ARCPYCNRELL--PTPREEVIE----- 108
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
++P +F +F +C C +++W G+
Sbjct: 109 -KVPLYVFLNAEKFSRCPSCGRIFWRGSH 136
>gi|380694086|ref|ZP_09858945.1| hypothetical protein BfaeM_08908 [Bacteroides faecis MAJ27]
Length = 216
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 46/233 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ S E L ++G+D+E +P + + +V+LLQ++
Sbjct: 21 PGRIHVIQSEAETE--KAVAYLKSQPILGIDSETRPSFTKGQSH-KVALLQIS------- 70
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
SDE +F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 71 ---SDE--CCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN----SCSSISELDSSNL 234
L++ QK YAA DA + I+N+ Q ++ + GN S + E+++S+L
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKRTGNYEVESLPAEEEVNASSL 213
>gi|126030364|pdb|2E6L|A Chain A, Structure Of Mouse Wrn Exonuclease Domain
gi|126030365|pdb|2E6M|A Chain A, Structure Of Mouse Werner Exonuclease Domain
Length = 208
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 39/204 (19%)
Query: 13 LVTSTESPEFTHLAR----ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
+V S E+ + + L+ LS +VG D EW P RV+++QL
Sbjct: 17 IVYSYEASDCSFLSEDISMRLSDGDVVGFDMEWPPIYKPGKR-SRVAVIQLCVS------ 69
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
ES + + +S P + LK L + I K G + D L F
Sbjct: 70 ----ESKCYLFHISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF----- 115
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDW 185
D+ ++E ++++T + N KL ET SL + K +L L K ++CS+W
Sbjct: 116 DV---KLESFVELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNW 164
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIF 209
SN PLTE+QK YAA DA+ + I+
Sbjct: 165 SNFPLTEDQKLYAATDAYAGLIIY 188
>gi|148270554|ref|YP_001245014.1| hypothetical protein Tpet_1425 [Thermotoga petrophila RKU-1]
gi|147736098|gb|ABQ47438.1| protein of unknown function DUF82 [Thermotoga petrophila RKU-1]
Length = 164
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 17/149 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F D + LAK LR +G+D S+ EP +++ KE R+LLT+ + L++
Sbjct: 5 RFAVDTTLVPLAKKLRTLGLDVKVCCSE--EPGKVLLICRKEGRILLTKRSSLIKFFEKY 62
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+++ +++ + L V+E F+LK +RC CN + P EE +E
Sbjct: 63 GQKVFYIEN---EKDLKTVVEHFKLKPEH----ARCPYCNRELL--PTPREEVIE----- 108
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
++P +F +F +C C +++W G+
Sbjct: 109 -KVPLYVFLNAEKFSRCPSCGRIFWRGSH 136
>gi|313127205|ref|YP_004037475.1| hypothetical protein Hbor_24740 [Halogeometricum borinquense DSM
11551]
gi|448288323|ref|ZP_21479523.1| hypothetical protein C499_16077 [Halogeometricum borinquense DSM
11551]
gi|312293570|gb|ADQ68030.1| uncharacterized conserved protein [Halogeometricum borinquense DSM
11551]
gi|445569842|gb|ELY24412.1| hypothetical protein C499_16077 [Halogeometricum borinquense DSM
11551]
Length = 177
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 23/169 (13%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATP--RSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQY 415
+ L D M+ L +LR G DAA P L+++ +E R L+TRD +L R
Sbjct: 13 RLLLDAMLGKLTTYLRMCGYDAAYALDDGPDPGDDALLERAREENRTLVTRDERLARR-- 70
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEA-FQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
+ + V + QL E A + +++ + RC+ CNG+ VE
Sbjct: 71 -APDGVL-VTTRAITDQLREFSSAGYAVELRGGPV--RCSTCNGQ-----------VERV 115
Query: 475 KGFQRIPDCLFDKNLQ-FWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
+ +P+ D Q W+C+DC Q+YW+G+ + + V K ID K NE
Sbjct: 116 GTDEPVPEYAPDPGEQPLWRCLDCGQVYWKGSHWDD-VAKRIDA-KENE 162
>gi|389640871|ref|XP_003718068.1| exosome complex exonuclease Rrp [Magnaporthe oryzae 70-15]
gi|351640621|gb|EHA48484.1| exosome complex exonuclease Rrp [Magnaporthe oryzae 70-15]
Length = 828
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F P I+K+ D+++L D+G L + +++ H +
Sbjct: 294 EILNEVFADPSIVKVFHGAFMDIVWLQR-------DLG-------LYVVGLFDTFHAAE- 338
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L +KSLA + K+ +D K Q +DW RPL EE YA D H L+ ++++ +
Sbjct: 339 --ALMYPSKSLAYLLKKFVDFEADKRYQTADWRIRPLPEEMLYYARSDTHYLLYVYDMMR 396
>gi|170763502|ref|NP_035851.3| Werner syndrome ATP-dependent helicase homolog [Mus musculus]
gi|170763504|ref|NP_001116294.1| Werner syndrome ATP-dependent helicase homolog [Mus musculus]
gi|342187359|sp|O09053.3|WRN_MOUSE RecName: Full=Werner syndrome ATP-dependent helicase homolog;
AltName: Full=Exonuclease WRN
gi|3885838|gb|AAC78077.1| Wrn protein [Mus musculus]
gi|29748014|gb|AAH50921.1| Wrn protein [Mus musculus]
gi|38173728|gb|AAH60700.1| Wrn protein [Mus musculus]
Length = 1401
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL ES +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SESKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|379731252|ref|YP_005323448.1| 3'-5' exonuclease [Saprospira grandis str. Lewin]
gi|378576863|gb|AFC25864.1| 3'-5' exonuclease [Saprospira grandis str. Lewin]
Length = 194
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 84/189 (44%), Gaps = 41/189 (21%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLL-DLSS 86
AL+Q ++G D E KP P VSL+QLA P+ VFL+ +L S
Sbjct: 39 ALNQCKILGFDTESKPSFRKGEYHP-VSLIQLAM-------PDK-------VFLIRNLKS 83
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSST--FCSQGCDIGFDRVEPYLDITSI 144
+ LK LF +P I+K G + D+ L F ++G + DI I
Sbjct: 84 ----GFSDGLKALFENPKIVKAGPALRDDIRDLQRLRPFKAKG----------FKDIADI 129
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+Q+G + N+ L +SK Q S+W PL++ Q YAA DA+
Sbjct: 130 AKANGIQQMGAR---------NLTAIFLGKRISKSQQTSNWEREPLSQAQNFYAATDAYL 180
Query: 205 LIEIFNIFQ 213
++I+ +FQ
Sbjct: 181 GLKIYTLFQ 189
>gi|265762514|ref|ZP_06091082.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263255122|gb|EEZ26468.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 216
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ TES E L +++G+D+E +P + + + +V+LLQ++
Sbjct: 21 PGRIHVI-QTES-EAQKAVVYLQSQTILGIDSETRPSFT-KGHSHKVALLQIS------- 70
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
SDE +F L+++ + P I EL P ++K+G K D + L + F
Sbjct: 71 ---SDE--CCFLFRLNMTGLTQPII-----ELLEDPKVIKVGLSLKDDFMMLHKRAPFNQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + ++ R + KSL I L +SK + S+W
Sbjct: 121 QAC-------------------IELQEYVRPFGIQDKSLQKIYGILFSEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
LT+ QK YAA DA + I+++ + ++ + GN
Sbjct: 162 EADVLTDAQKQYAATDAWACLNIYHLLE-ELKRTGN 196
>gi|212532415|ref|XP_002146364.1| 3'-5' exonuclease/helicase (Wrn), putative [Talaromyces marneffei
ATCC 18224]
gi|210071728|gb|EEA25817.1| 3'-5' exonuclease/helicase (Wrn), putative [Talaromyces marneffei
ATCC 18224]
Length = 973
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 96/225 (42%), Gaps = 49/225 (21%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
+ + IH + E E A S S L+G D EWKPQ S VSL+Q+A
Sbjct: 712 RKIGIHYCKNLEHAE--RAAALFSDSKLLGFDIEWKPQAQTTSGIKSNVSLIQIA----- 764
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSS 121
N + L ++ I +L LK L S D +K+G K D
Sbjct: 765 ---------NEERIALFHIALFKGNEIHDLVPPSLKLLLESTDTVKVGVSIKAD------ 809
Query: 122 TFCSQGCDIGFDRVEPYLDITSI----YNHLHH-KQLGRKLPKETK----SLANICKELL 172
CS R+ +LDI + +HL+ + G PK +LA +ELL
Sbjct: 810 --CS--------RIRRHLDIDTRGQFELSHLYKLVKYGSTQPKSVNRRAVNLAQQVEELL 859
Query: 173 DISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
+ L K +++ SDW+ +PL Q YAA DA+ I ++N + K
Sbjct: 860 GLPLRKDSDVRKSDWT-KPLDYAQVQYAASDAYACICLYNTLEAK 903
>gi|348578015|ref|XP_003474779.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Cavia
porcellus]
Length = 1486
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 33/187 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ LS ++G D EW P S + RV+L+QL ES + + +
Sbjct: 69 ISMRLSPGDVIGFDMEWPPTYS-KGKLSRVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENEAIKKAGVGIEGDQWKLLRDF-----DI---KLKSFVELTDV 164
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDA 202
N + E SL + K L L K ++CS+WSN PL+E+QK YAA DA
Sbjct: 165 ANQ-------KLKSTEIWSLNGLVKHLFGKQLLKDKSVRCSNWSNFPLSEDQKLYAATDA 217
Query: 203 HCLIEIF 209
+ + I+
Sbjct: 218 YAGLIIY 224
>gi|294101561|ref|YP_003553419.1| hypothetical protein [Aminobacterium colombiense DSM 12261]
gi|293616541|gb|ADE56695.1| protein of unknown function DUF82 [Aminobacterium colombiense DSM
12261]
Length = 262
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P F+ D+ V L LR +G+D + + +++ + E R+++TRD LL+ + +
Sbjct: 96 PSFVVDINVARLGSLLRLMGLDTVYNHAWR--DKDIAAISKDEGRIVITRDRSLLKRKII 153
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
++ R + QL EVI+ + LK S SRC+ CN +P+ E+ ++ +
Sbjct: 154 TYGRLIREER--PWAQLFEVIKFYNLK-SWLFPFSRCSFCNETL--RPVQKEDVLDRLEP 208
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
R LF +F +C C ++YW G+
Sbjct: 209 LTR----LFYN--EFTECPKCGKVYWSGSH 232
>gi|229442293|gb|AAI72837.1| Werner syndrome protein [synthetic construct]
Length = 281
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|99032230|pdb|2FBT|A Chain A, Wrn Exonuclease
gi|99032231|pdb|2FBV|A Chain A, Wrn Exonuclease, Mn Complex
gi|99032232|pdb|2FBX|A Chain A, Wrn Exonuclease, Mg Complex
gi|99032233|pdb|2FBY|A Chain A, Wrn Exonuclease, Eu Complex
gi|99032234|pdb|2FC0|A Chain A, Wrn Exonuclease, Mn Dgmp Complex
Length = 205
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 38 ISMSLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHVSSM 86
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 87 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 133
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 134 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 185
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 186 AYAGFIIYRNLEI 198
>gi|374287715|ref|YP_005034800.1| putative 3'-5' exonuclease [Bacteriovorax marinus SJ]
gi|301166256|emb|CBW25831.1| putative 3'-5' exonuclease [Bacteriovorax marinus SJ]
Length = 193
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IHL+T + E +A+ LS ++G D E +P N+ V+LLQL
Sbjct: 24 IHLIT--DDAEAIKIAKKLSSEEILGFDTETRPSFKKGENYD-VALLQL----------- 69
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDI 130
S E++A +L L+ + LP+ EL+ +L +I+K G + D+ L +
Sbjct: 70 STENDA---YLFRLNKMKLPN--ELV-DLLADENIVKAGVAVRDDIKSLQK--------L 115
Query: 131 GFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
+ E + ++ + L K G L +C L+ LSK + ++W L
Sbjct: 116 NPFKEESFCELQDVAKELGVKNFG---------LRALCAIFLNYRLSKRAKITNWEQPKL 166
Query: 191 TEEQKNYAAIDAHCLIEIFNIFQV 214
T+ Q +YAA DA ++I+ Q+
Sbjct: 167 TQAQIHYAACDAWVGLQIYKKMQL 190
>gi|399155667|ref|ZP_10755734.1| putative 3'-5' exonuclease [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 252
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 37/204 (18%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
KIHL+T ES + + + L Q S++G D E +P + VSLLQL
Sbjct: 52 KIHLIT--ESKDVSEAIKILRQESVLGFDTETRPTFKKGDQYS-VSLLQL---------- 98
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
S FL L+ + LP E L L PDILK+G D+ L
Sbjct: 99 ----STREEAFLFRLNYLGLP---EELASLLADPDILKVGVAILDDIRALQKLR------ 145
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
FD E ++++++I G L T L N+ + +SK+ Q ++W
Sbjct: 146 -KFD-AEGFVELSNI---------GSDLGIVTCGLRNLAAIFFGVRISKKEQLTNWERPD 194
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQ 213
L Q YAA DA +++ + +
Sbjct: 195 LNSSQCLYAATDAWICLKMLSFLE 218
>gi|448330909|ref|ZP_21520185.1| hypothetical protein C489_17214 [Natrinema versiforme JCM 10478]
gi|445610745|gb|ELY64514.1| hypothetical protein C489_17214 [Natrinema versiforme JCM 10478]
Length = 147
Score = 55.1 bits (131), Expect = 9e-05, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQYL 416
+ L DVM GL +LR D A + E + L+ E R ++TRD +L H
Sbjct: 2 RLLLDVMCGGLTSYLRMCNYDTAYAGDRGLEADDDLLAVARDEGRTVVTRDVELAAH--- 58
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
++ ++S + QL EV +A L +S + C +CNG + +T A
Sbjct: 59 -ADEAILLESREVDAQLAEV-DAAGLDLSPAAEPAFCGRCNGPLVDVDPATSTPAYA--- 113
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
PD ++ W C DC Q +W G+ + V ++
Sbjct: 114 ----PD---PSGVETWVCRDCGQYFWRGSHWDRVVATLSEI 147
>gi|452205923|ref|YP_007486045.1| DUF82 family protein [Natronomonas moolapensis 8.8.11]
gi|452082023|emb|CCQ35274.1| DUF82 family protein [Natronomonas moolapensis 8.8.11]
Length = 164
Score = 55.1 bits (131), Expect = 9e-05, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTS-KEKRVLLTRDAKLLRHQYL 416
+ L DVM+ LA +LR G DAA + E + I + E R LLTRD +L
Sbjct: 20 RLLLDVMLGSLAVYLRVCGYDAAYALDRGLEADDRIAALAGAEGRRLLTRDVELADS--- 76
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
++ + + L+ Q L + A +++ D+ S C +CNG +P+ E +
Sbjct: 77 VEGAVLLAERDLEAQ--LGELRAAGVELVPDEEPSYCGRCNGSL--EPVPAEADTPSYAP 132
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
DC W+C C QL+W G+ Y
Sbjct: 133 DPGGTDC--------WRCRSCEQLFWRGSHY 155
>gi|407261615|ref|XP_003946318.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Mus
musculus]
Length = 1434
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 130 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SENKCYLF 173
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 174 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 220
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 221 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 272
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 273 YAATDAYAGLIIY 285
>gi|67848464|gb|AAY82265.1| hypothetical protein At2g32420 [Arabidopsis thaliana]
Length = 327
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 37/209 (17%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TES + LA L++ + +D E Q S +S +L+Q++ E D
Sbjct: 124 TES-QLKELAEILAKEQVFAVDTE---QHSLRSFLGFTALIQISTH-------EED---- 168
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
FL+D +I L + +L+ +F P+I K+ D+I+L F
Sbjct: 169 ---FLVD--TIALHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDFH------------ 211
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ N + L K +SLA + + + ++ +K LQ DW RPL+EE
Sbjct: 212 -----IYVVNMFDTAKACEVLSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVR 266
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSS 225
YA DAH L+ I + ++ Q SS
Sbjct: 267 YARXDAHYLLYIADSLTTELKQLATDSSS 295
>gi|403294330|ref|XP_003938145.1| PREDICTED: Werner syndrome ATP-dependent helicase [Saimiri
boliviensis boliviensis]
Length = 1430
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPVY-NKGKLGKVALIQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F D+ +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAIKKAGVGIEGDQWKLLRDF-----DV---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL + K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCIETWSLNGLIKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRKLEI 229
>gi|295677971|ref|YP_003606495.1| hypothetical protein BC1002_2936 [Burkholderia sp. CCGE1002]
gi|295437814|gb|ADG16984.1| protein of unknown function DUF82 [Burkholderia sp. CCGE1002]
Length = 269
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D E + + ++R++LTRD +LL+ + I
Sbjct: 114 RFIADAHLGGLAPLLRLAGFDTLYDNHFPDADIEAL--AAAQQRIVLTRDRELLKRRN-I 170
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V++L +QL EV E L S Q C CN PL EA
Sbjct: 171 THGCY-VRALRPREQLREVFERLDLARSA-QPFRLCLVCNA-----PLRRIGREEAGP-- 221
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + ++ +F C C +++WEGT +
Sbjct: 222 -RVPHGVLLRHSRFVTCDVCGRVFWEGTHW 250
>gi|257051955|ref|YP_003129788.1| hypothetical protein Huta_0872 [Halorhabdus utahensis DSM 12940]
gi|256690718|gb|ACV11055.1| protein of unknown function DUF82 [Halorhabdus utahensis DSM 12940]
Length = 149
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 28/162 (17%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQYL 416
+ L D M+ LA +LR G DAA + E + L+ E R LLTRD +L
Sbjct: 4 RLLLDAMLGKLATYLRMCGYDAAYALDRGIEADDRLLAIADAEDRTLLTRDRQLATRA-- 61
Query: 417 IKNQIYRVKSLL-----KNQQLLEVIEA-FQLKISEDQLMSRCTKCNGRFIQKPLSTEEA 470
SLL N+QL E+ +A ++L ++ + RC CNG L A
Sbjct: 62 -------ADSLLLASHDVNEQLRELQDAGYELTLATPPV--RCGTCNGH-----LDAVGA 107
Query: 471 VEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
E PD WQC DC Q +W+G+ + + Q
Sbjct: 108 DEPTPASVPSPDAE-----SVWQCRDCGQYFWQGSHWDDVAQ 144
>gi|403512793|ref|YP_006644431.1| 3'-5' exonuclease family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402802886|gb|AFR10296.1| 3'-5' exonuclease family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 444
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 39/214 (18%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L + L + + LLDI L+KE DWS RPL E+ YAA+D LIE+ + +
Sbjct: 160 GRLLGYQRVGLGFMVERLLDIRLAKEHSAVDWSQRPLPEDWLRYAALDVEILIELRDRLE 219
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATS------ 267
++ + G + E IL P +T ++ + +R
Sbjct: 220 AELEEAGKLEWAREE---------FAAILAAPPKEPRTDPWRRTSGIHKVRKQRSLAAVR 270
Query: 268 --YY-------------SQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRECDKA 312
+Y + LP+ + V TMP D + + +R++G K+ R
Sbjct: 271 ELWYERDRIARERDTSPGRVLPDAAI--VEAATTMPRDANELNRIRQFGIKLARRY---- 324
Query: 313 PKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPP 346
+ K R+ + S R + GD GPPP
Sbjct: 325 -PATWLKAIDRARDMAQSELPRPNAPGD--GPPP 355
>gi|390345989|ref|XP_001198503.2| PREDICTED: exosome component 10 [Strongylocentrotus purpuratus]
Length = 752
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 36/197 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L+R+L QS + +D E S++S L+Q+ S A +++D
Sbjct: 276 LSRSLKQSKEIAVDLE---HHSYRSYLGFTCLMQI--------------STAEHDYVVD- 317
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
++ L S ++L + F P I+K+ D+ +L D+G +
Sbjct: 318 -TLELRSELQMLNDAFTDPKIVKVFHGANMDIDWLQR-------DLGL----------YV 359
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
N Q R L SLA++ + K+ Q +DW RPL EE +YA D H
Sbjct: 360 VNMFDTHQASRSLGFPHHSLASLLSRYCQVEADKQYQLADWRIRPLPEEMLHYAREDTHY 419
Query: 205 LIEIFNIFQVKVAQKGN 221
L+ I++ + ++ ++GN
Sbjct: 420 LLYIYHTMKNELIKRGN 436
>gi|229820453|ref|YP_002881979.1| 3'-5' exonuclease [Beutenbergia cavernae DSM 12333]
gi|229566366|gb|ACQ80217.1| 3'-5' exonuclease [Beutenbergia cavernae DSM 12333]
Length = 416
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 140 DITSIYNHLHHKQL-GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
++ + H+ +L GR L +E LA I ++ L ++L+KE DWS RPL E+ YA
Sbjct: 103 EVGLVPRHVFDTELAGRLLGRERVGLAAIVEQELGLTLAKEHSAVDWSTRPLREDWLRYA 162
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNS 222
A+D L+E+ + + + + G +
Sbjct: 163 ALDVEVLVELRDALERDLVRAGKA 186
>gi|357059998|ref|ZP_09120772.1| hypothetical protein HMPREF9332_00329 [Alloprevotella rava F0323]
gi|355376888|gb|EHG24128.1| hypothetical protein HMPREF9332_00329 [Alloprevotella rava F0323]
Length = 210
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 37/184 (20%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
AL +S ++G+D E +P + F +V+LLQ+A N + FL L+S
Sbjct: 40 ALEKSKILGIDTETRPS-FRKGVFHQVALLQIA--------------NEDICFLFRLNSF 84
Query: 88 P-LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
+PS L++L + +ILK+G K D+ L+ + +LD+
Sbjct: 85 GFIPS----LRKLLANKEILKIGLSLKDDIHMLAQRHAFVP--------DHFLDLQD--- 129
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ K++G + SL + + + +SK Q S+W L+ QK YAA DA+ I
Sbjct: 130 --YVKEMG----IQDMSLQKLFANVFHLRISKNAQLSNWEADVLSPAQKTYAATDAYSCI 183
Query: 207 EIFN 210
++N
Sbjct: 184 MLYN 187
>gi|345781559|ref|XP_539984.3| PREDICTED: Werner syndrome ATP-dependent helicase [Canis lupus
familiaris]
Length = 1412
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ LS +VG D EW P + + RV+L+QL E+ + + +
Sbjct: 69 ISMNLSTGGVVGFDMEWPPVYTKRKP-SRVALIQLCV----------SENKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G K D L CD D ++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENEAIKKAGVGIKGDQRKLL-------CDFDID-LKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CS+W + PLTE+QK YAA D
Sbjct: 165 ANE--------KLKCTETWSLNGLVKHLFGKQLLKDRSIRCSNWGDFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ + I+ ++
Sbjct: 217 AYAGLIIYQKLEI 229
>gi|303246814|ref|ZP_07333091.1| protein of unknown function DUF82 [Desulfovibrio fructosovorans JJ]
gi|302491831|gb|EFL51711.1| protein of unknown function DUF82 [Desulfovibrio fructosovorans JJ]
Length = 255
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D V LA LR +G DA R E EL ++E R+ L+RD L+ ++
Sbjct: 100 RFVADANVGRLATLLRLLGYDAVYDRDM--EDGELARIAAEEGRIALSRDVSCLKRSKIM 157
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
++ R +QL +++ AF L +RC +CN P+ ++
Sbjct: 158 YGRLIRAND--PQEQLRDILRAFGLTPPYGAF-TRCLRCNREL--APVDKKD-------- 204
Query: 478 QRIPDCLFDKNLQFWQ----CMDCNQLYWEGTQYHN 509
I D L K ++++ C +C ++YW G+ Y +
Sbjct: 205 --ILDRLLPKTKRYYEKFSMCPECGRIYWAGSHYEH 238
>gi|242050364|ref|XP_002462926.1| hypothetical protein SORBIDRAFT_02g034580 [Sorghum bicolor]
gi|241926303|gb|EER99447.1| hypothetical protein SORBIDRAFT_02g034580 [Sorghum bicolor]
Length = 760
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 36/205 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ HLAR L + +D E Q S +S +L+Q++ Q +D+ +
Sbjct: 21 QLEHLARLLGEERAFAVDTE---QHSIRSFLGYTALMQISTQ--------NDD------Y 63
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L + +L+ +F + I K+ D+++L F
Sbjct: 64 LID--TIALHDVMGILRPVFANSSICKIFHGADNDVLWLQRDFH---------------- 105
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ N + L K KSLA + + +++ K +Q DW RPLT E YA
Sbjct: 106 -IYVVNMFDTAKACETLSKPQKSLAYLLEVYCEVTTDKTMQREDWRLRPLTPEMIEYART 164
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCSS 225
DAH L+ I N ++ K SS
Sbjct: 165 DAHYLLYIANCLASELHAKACDTSS 189
>gi|262408617|ref|ZP_06085163.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646256|ref|ZP_06723909.1| 3'-5' exonuclease [Bacteroides ovatus SD CC 2a]
gi|294805802|ref|ZP_06764678.1| 3'-5' exonuclease [Bacteroides xylanisolvens SD CC 1b]
gi|336406968|ref|ZP_08587610.1| hypothetical protein HMPREF0127_04923 [Bacteroides sp. 1_1_30]
gi|345511326|ref|ZP_08790870.1| hypothetical protein BSAG_01819 [Bacteroides sp. D1]
gi|229444317|gb|EEO50108.1| hypothetical protein BSAG_01819 [Bacteroides sp. D1]
gi|262353482|gb|EEZ02576.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638389|gb|EFF56754.1| 3'-5' exonuclease [Bacteroides ovatus SD CC 2a]
gi|294446978|gb|EFG15569.1| 3'-5' exonuclease [Bacteroides xylanisolvens SD CC 1b]
gi|335948443|gb|EGN10151.1| hypothetical protein HMPREF0127_04923 [Bacteroides sp. 1_1_30]
Length = 222
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +I+++ S E L S++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAETE--RAVAYLQSRSVIGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|390961716|ref|YP_006425550.1| hypothetical protein CL1_1559 [Thermococcus sp. CL1]
gi|390520024|gb|AFL95756.1| hypothetical protein CL1_1559 [Thermococcus sp. CL1]
Length = 146
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 363 VMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIY 422
+M+ LA+ LR G D + E+I +E R++LTRD+ L + +++
Sbjct: 1 MMLGRLARWLRLYGHDTLYGVE---DDDEIIRVALREGRIILTRDSGLAERAKKLGAEVF 57
Query: 423 RVKSLLKNQQLLEVIEAFQLKISE-DQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIP 481
+ S Q+ E++ A ++ SE +RC KCNG K +S EE E ++P
Sbjct: 58 LLSSNSLEGQVKELM-ASGVEFSELFPASARCPKCNGPI--KRVSKEEIRE------KVP 108
Query: 482 DCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
+ ++ K +F+ C C Q+YW G Q+ V+
Sbjct: 109 EAVYWKYDEFYVCTKCGQIYWPGRQWREMVK 139
>gi|423212341|ref|ZP_17198870.1| hypothetical protein HMPREF1074_00402 [Bacteroides xylanisolvens
CL03T12C04]
gi|392694787|gb|EIY88013.1| hypothetical protein HMPREF1074_00402 [Bacteroides xylanisolvens
CL03T12C04]
Length = 222
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +I+++ S E L S++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAETE--RAVAYLQSRSVIGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|212224274|ref|YP_002307510.1| hypothetical protein TON_1125 [Thermococcus onnurineus NA1]
gi|212009231|gb|ACJ16613.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
Length = 153
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D+M+ LA+ LR G D + E++ +E R++LTRD+ L R +
Sbjct: 2 KFIADMMLGRLARWLRLYGYDTLYGIE---DDNEILRIALEEGRIILTRDSGLARVAKRL 58
Query: 418 KNQIYRVKSLLKNQQLLEVIE---AFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
++ + S +Q+ E+ E F+ + +RC KCNG + +P+ E +
Sbjct: 59 GAEVILIHSNSLEEQVKELKEHGLEFKDLFPTN---ARCPKCNG--LIRPIRKGEIRD-- 111
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
++P ++ +F+ C C Q+YW G Q+ ++
Sbjct: 112 ----KVPSSVYANYDEFYICESCGQIYWPGRQWREMLK 145
>gi|426359284|ref|XP_004046910.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Gorilla gorilla gorilla]
Length = 1429
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMRLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|298481453|ref|ZP_06999645.1| 3'-5' exonuclease domain protein [Bacteroides sp. D22]
gi|295086916|emb|CBK68439.1| Ribonuclease D [Bacteroides xylanisolvens XB1A]
gi|298272317|gb|EFI13886.1| 3'-5' exonuclease domain protein [Bacteroides sp. D22]
Length = 222
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +I+++ S E L S++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAETE--RAVAYLQSRSVIGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|395506589|ref|XP_003757614.1| PREDICTED: probable exonuclease mut-7 homolog, partial [Sarcophilus
harrisii]
Length = 752
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 81/192 (42%), Gaps = 33/192 (17%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
L +VG+D EW+P PRVS+LQ+A + V+LLDL
Sbjct: 276 VLQPGQVVGIDMEWRPSFGLVGR-PRVSVLQIATK--------------EHVYLLDLLQF 320
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
E KEL + DL LS+T+ + + LD+ +
Sbjct: 321 SKLDQEEKEKELC---------YGMSGDLCSLSTTY--PALREMEKQAQGILDLLQVDKQ 369
Query: 148 LHHK------QLGRKLPKET-KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ K P++ K L+ + + LL L K Q S+W RPL EEQ YAA
Sbjct: 370 VRMGVSSSLPSFITKSPRQAEKGLSLLVQNLLGKPLDKTEQLSNWEKRPLREEQILYAAS 429
Query: 201 DAHCLIEIFNIF 212
DA+CL+E++ +
Sbjct: 430 DAYCLLEVYEML 441
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 15/130 (11%)
Query: 342 QGPPPWDLSLGGD-----GYPKF-------LCDVMVEGLAKHLRCVGIDAATPRSKKPEP 389
Q PP L+ G+ +P+ +CD M++GLA++LRC+G+D + +
Sbjct: 478 QSPPKQVLASAGETLSASAFPEISAKDFNVVCDTMLQGLARYLRCLGVDVRVLENTD-DH 536
Query: 390 RELIDQTSKEKRVLLTRDAKLLRHQYLI-KNQIYRVK-SLLKNQQLLEVIEAFQLKISED 447
R+ + KE R++LT + + Q + + + + V S QQ L V++ F ++++
Sbjct: 537 RQAAEIARKEGRIILTSGSPYQKLQAQVGEGRCFSVNCSEKAKQQALSVLKHFNVRVAFT 596
Query: 448 QLMSRCTKCN 457
+ SRC CN
Sbjct: 597 DVFSRCQVCN 606
>gi|66816197|ref|XP_642108.1| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
gi|60470232|gb|EAL68212.1| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
Length = 718
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPES---DESNASVVFLLDLSSIPLP 90
++G DAEW SNF + ++N + S+ + FL+ +S +
Sbjct: 194 IIGFDAEW-------SNFNSIDDSTTTTTTTSKYNHKVALIQLSSKNETFLIQVSQ--ME 244
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTF--CSQGCDIGFDRVEPYLDITSIYNHL 148
I L+++ P ++K+G QD + TF ++GC +D+ I
Sbjct: 245 KIPTSLEQILTDPRLIKVGVAVSQDAATIFQTFSVVTKGC----------VDLVPI---- 290
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAHCLI 206
R E LA++ +++++L K ++CS W N+ LT +Q +YAA DA
Sbjct: 291 -----ARLTNYEGNGLASLALNVMNVTLDKSNLIRCSHWENKDLTNDQIHYAAADAWVGR 345
Query: 207 EIFNIF 212
EIF I
Sbjct: 346 EIFEIM 351
>gi|225447009|ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261955 [Vitis vinifera]
Length = 936
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 75/322 (23%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ LA LS+ + +D E Q S +S +L+Q++ Q N + +
Sbjct: 121 QLKELADVLSKQRVFAVDTE---QHSLRSFLGFTALIQISTQ-----NED---------Y 163
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L ++L+ +F +P I K+ D+++L F ++
Sbjct: 164 LVD--TIALHDTLDVLQPVFANPSICKVFHGADNDVLWLQRDF--------------HIY 207
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ ++++ ++ L K KSLA + + ++ +K LQ DW RPL+ E YA
Sbjct: 208 VVNLFDTAKACEV---LSKPQKSLAYLLETYCGVATNKLLQREDWRQRPLSVEMLEYAQT 264
Query: 201 DAHCLIEIFN--IFQVKVAQKGNSCSS----------------------ISELDSSNLDL 236
DAH L+ I N I +++ NSC I E++ S +
Sbjct: 265 DAHYLLYIANCLIAELRQHDSENSCCPDDKLRFVLEASRRSNTVCLQLYIKEIEISPGES 324
Query: 237 GLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKI 296
I+ + G + K C+ D++R C +++RV DESL +
Sbjct: 325 AASSIISRHLNGQGGISSKACDLQDLVRRL-----CTWRDLMARVH-------DESLRYV 372
Query: 297 VRKYGEKILLRECDKAPKTSKK 318
+ ++ ++ DK P T K+
Sbjct: 373 L---SDQAIIALADKVPTTQKE 391
>gi|312375236|gb|EFR22650.1| hypothetical protein AND_14417 [Anopheles darlingi]
Length = 782
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 6 RKPLK---IHLVTSTESPEF--THLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
R PL+ +H++ + + + L R + ++G D EW S+Q V+LLQLA
Sbjct: 44 RDPLRGQQVHIINTADECRLIVSKLHRHCQEYKVLGFDCEWV---SNQGQRRPVALLQLA 100
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
G +++ L ++ +P + L +L +I+K+G +D L
Sbjct: 101 SHRGL----------CALIRLCMINKLP-----QELYDLLNDDNIIKVGVSPYEDARLLR 145
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK-- 178
+ +VE LD+ + + + E +A + E+L ++L K
Sbjct: 146 EDYKL--------KVESTLDL---------RFMAERAGLEPFGIARLANEVLGLTLDKHW 188
Query: 179 ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
+++CSDW L++ Q YAA DAH +E+F F K+
Sbjct: 189 KIRCSDWEAPDLSDRQIKYAASDAHVAVELFKKFAYKL 226
>gi|427403981|ref|ZP_18894863.1| hypothetical protein HMPREF9710_04459 [Massilia timonae CCUG 45783]
gi|425717220|gb|EKU80185.1| hypothetical protein HMPREF9710_04459 [Massilia timonae CCUG 45783]
Length = 272
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F+ D + GLA+ LR G D T ++ D + R++LTRD +LL+ + ++
Sbjct: 103 FVADAHLGGLARLLRMAGYD--TLYDNHYHDDDVADLAENDDRIVLTRDRELLKRRSIVH 160
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
+ +L QQL E+ L + S C CN PL AV+ A
Sbjct: 161 GCY--IHALDPPQQLRELFGRLDLAGGA-RPFSLCLHCN-----LPL---RAVDKASVLD 209
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + + F C +C ++YW+G+ Y
Sbjct: 210 RLPASVRALHDSFTTCDNCLRVYWKGSHY 238
>gi|260950129|ref|XP_002619361.1| hypothetical protein CLUG_00520 [Clavispora lusitaniae ATCC 42720]
gi|238846933|gb|EEQ36397.1| hypothetical protein CLUG_00520 [Clavispora lusitaniae ATCC 42720]
Length = 738
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH-HKQLG 154
L E+F +P ILK+ D+I+L D+G L I S+++ H K+LG
Sbjct: 283 LNEIFANPAILKVLHGANMDIIWLQR-------DLG-------LYIVSLFDTYHASKKLG 328
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
PK SLA + + SK+ Q +DW RPLT+ YA D H L+ I++ +
Sbjct: 329 --FPK--FSLAYLLENFAHFKTSKKYQLADWRIRPLTDAMMQYARADTHFLLNIYDQLRN 384
Query: 215 KVAQKG 220
K+ G
Sbjct: 385 KLLNAG 390
>gi|116203503|ref|XP_001227562.1| hypothetical protein CHGG_09635 [Chaetomium globosum CBS 148.51]
gi|88175763|gb|EAQ83231.1| hypothetical protein CHGG_09635 [Chaetomium globosum CBS 148.51]
Length = 827
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 17/125 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F P I+K+ D+I+L D+G L + +++ +
Sbjct: 290 EVLNEVFADPKIVKVLHGAFMDIIWLQR-------DLG-------LYVVGLFDTFY---A 332
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L KSLA + K+ +D K+ Q +DW RPL EE YA D H L+ I+++ +
Sbjct: 333 STALQYAGKSLAFLLKKFVDFDADKKYQLADWRLRPLPEEMFYYARSDTHFLLYIYDMLR 392
Query: 214 VKVAQ 218
++AQ
Sbjct: 393 NELAQ 397
>gi|220917449|ref|YP_002492753.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955303|gb|ACL65687.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-1]
Length = 288
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R+L + L+ + + + LSK Q SDW RPLT +Q YA++D H L+ +F++
Sbjct: 111 ARRLGRPGLGLSALVEAHFGVRLSKAFQRSDWGRRPLTPDQLAYASLDTHFLLPLFDLLT 170
Query: 214 VKVAQKG 220
++A +G
Sbjct: 171 GELATRG 177
>gi|156361913|ref|XP_001625528.1| predicted protein [Nematostella vectensis]
gi|156212365|gb|EDO33428.1| predicted protein [Nematostella vectensis]
Length = 552
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
FL+D ++ L + LL E F +P+ILK+ D+ +L F
Sbjct: 300 FLVD--TLELRNDLHLLNESFTNPNILKVFHGADMDVGWLQRDFG--------------- 342
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L E SLA + K+ ++ K+ Q +DW RPL EE YA
Sbjct: 343 --IYVVNMFDTGQASRVLALERFSLAFLLKKFCGVTADKQYQLADWRIRPLPEEMIRYAR 400
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSSI 226
D H L+ I + + ++ + GN +++
Sbjct: 401 EDTHYLLYIHDRLRNELIRTGNENNNL 427
>gi|452958770|gb|EME64114.1| hypothetical protein G352_13180 [Rhodococcus ruber BKS 20-38]
Length = 343
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 391 ELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM 450
EL S +R+LLTRD LL + + L +Q++EV+ L +
Sbjct: 224 ELARIGSAHQRILLTRDRGLLERREITHGLFVHADRPL--EQIVEVVRRLDLG-ARFAPF 280
Query: 451 SRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNA 510
+RC +CNGR + P EE +E + R +D F +C +C ++YW G+ +
Sbjct: 281 TRCLRCNGRLVAVP--KEEVLEQLEPLTR---RFYD---DFSRCTECGRIYWAGSHHRKL 332
Query: 511 V 511
V
Sbjct: 333 V 333
>gi|425766974|gb|EKV05562.1| hypothetical protein PDIP_82420 [Penicillium digitatum Pd1]
gi|425780125|gb|EKV18143.1| hypothetical protein PDIG_10910 [Penicillium digitatum PHI26]
Length = 630
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 32 SSLVGLDAEWKPQRSH----QSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
S ++G D EWK Q S QSN VS++Q+A N + L ++
Sbjct: 425 SKVIGFDMEWKAQASGWDSIQSN---VSVIQIA--------------NEERIALFQIALF 467
Query: 88 -PLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT 142
P S+ +L LK L SPDI+K+G K D L +G D + +++
Sbjct: 468 KPARSLEDLVSPSLKRLVESPDIMKVGVSIKADCTRLRKY-------LGID-AKATFELS 519
Query: 143 SIYNHLHHKQLGRKL-PKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAA 199
+Y + + + KL K +L+ KE + L K +++C DW+ R L+ Q YAA
Sbjct: 520 HLYKLIKYGKDNPKLVNKRGVNLSEQIKEHFGLPLEKSDDVRCGDWT-RALSYRQVQYAA 578
Query: 200 IDAHCLIEIFNIFQVK 215
D + + +F+ + K
Sbjct: 579 TDPYACVRLFHTMEAK 594
>gi|170048985|ref|XP_001853674.1| 3'-5' exonuclease [Culex quinquefasciatus]
gi|167870951|gb|EDS34334.1| 3'-5' exonuclease [Culex quinquefasciatus]
Length = 755
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 5 YRKPL---KIHLVTSTESPE--FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQL 59
+R PL I +VT+ E + L ++G D EW ++ + V+LLQL
Sbjct: 38 FRGPLYDQTIRVVTNAEECQQVVGTLRNHCRDYRILGFDCEWVTEKGKRHP---VALLQL 94
Query: 60 ACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYL 119
A G +++ L + IP P + ELL + P ILK+G +D L
Sbjct: 95 ASHQGL----------CALIRLCQMKRIP-PELGELLND----PGILKVGIGAIEDAQLL 139
Query: 120 SSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKE 179
S + +VE LD+ HL + ++P +A + ++ L + L K
Sbjct: 140 RSDYNL--------KVESALDL----RHLAERC---RVPGPY-GMARLAEKSLGLQLDKH 183
Query: 180 --LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
++ SDW L+E Q YAA DAH +E+F ++ +V + G
Sbjct: 184 WRVRASDWEALELSERQLKYAANDAHVAVELFRLYADRVLRCG 226
>gi|412985693|emb|CCO19139.1| predicted protein [Bathycoccus prasinos]
Length = 686
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 101/268 (37%), Gaps = 66/268 (24%)
Query: 5 YRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-------RSHQSNFPRVSLL 57
Y+ P +++ + + R LS S+ +G+D EW + ++ +
Sbjct: 419 YKLPENVNVSFVDDENSLKEMFRVLSASNAIGIDTEWAAKLGGSDSENENEEDEEESKED 478
Query: 58 QLACQPGPRFNPESDESNASVV----------FLLDLSSI----PLPSIWELLKELFVSP 103
P P S + +V FLLDL + P + + L LF +
Sbjct: 479 DAKAAPPPSKRARSSALSETVALLQISSKSDCFLLDLPKLIDDAPSTVLRDTLGALFSND 538
Query: 104 DILKLGFKFKQDLIYLS--STFCSQGCDI------GFDRVEPYLDITSIYNH-------- 147
ILKL F K+D LS +++ Q ++ RVE D S
Sbjct: 539 SILKLVFAGKEDFKRLSQCASYLGQPRNVLDLQHYWRTRVE---DARSARQKKKMMKKNG 595
Query: 148 -----------------------LHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
L K+L R P L+N+C LL L K ++ SD
Sbjct: 596 EEEEEEEEEEENGEGTDRRRKPWLLEKELNRHQPI---GLSNLCSVLLSKPLDKSVRMSD 652
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
WS+RPL+E Q YAA+DA L++ I
Sbjct: 653 WSSRPLSESQTAYAALDAQVLVDCHQIL 680
>gi|410081706|ref|XP_003958432.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
gi|372465020|emb|CCF59297.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
Length = 735
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 22 FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFL 81
H+ + + + + +D E R++ + V L+Q++ + E+D +L
Sbjct: 222 LNHMLNDIKKYTEIAIDLEHHDYRTY---YGIVCLMQISTR-------ETD-------YL 264
Query: 82 LDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
+D +I L + ++L E+F P ++K+ D+I+L D+G L I
Sbjct: 265 VD--TIALRNDLKVLNEVFTDPSVVKVLHGAFMDIIWLQR-------DLG-------LYI 308
Query: 142 TSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAID 201
S+++ H R L SLA + +E + SK+ Q +DW RPL++ YA D
Sbjct: 309 VSLFDTFH---ASRALGFPRHSLAYLLEEFANFKTSKKYQLADWRVRPLSKAMTAYARAD 365
Query: 202 AHCLIEIFNIFQVKVAQKGNSCSSISE 228
H L+ I++ + ++ + ++E
Sbjct: 366 THFLLNIYDQLRNRLVETNKLVGVLNE 392
>gi|288920377|ref|ZP_06414688.1| protein of unknown function DUF82 [Frankia sp. EUN1f]
gi|288348254|gb|EFC82520.1| protein of unknown function DUF82 [Frankia sp. EUN1f]
Length = 246
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 391 ELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM 450
EL+ Q +E+RVLLTRD LL + L + V+ + Q +V++ F ++ +
Sbjct: 121 ELLAQAIRERRVLLTRDRGLLFRRSLPRGAY--VRGDRPDDQAHDVLDRFAPPLAP---L 175
Query: 451 SRCTKCNGRFIQKPLSTEEAV-EAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
+RC C +P+ EE + E G +R F +C+ C+Q+YW G
Sbjct: 176 TRCVSCGAEL--RPVPREEVLAEVEPGTRRT-------ATHFTRCIACSQIYWRGAH 223
>gi|397643395|gb|EJK75835.1| hypothetical protein THAOC_02433 [Thalassiosira oceanica]
Length = 240
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 5 YRKPLKIHLVT-STESPEFTHLARALSQSSLVGLDAEWKPQRS---HQSNFPRVSLLQLA 60
+RK LK+ +V + E+ E + L +GLDAEW+ R Q +V+ +Q+A
Sbjct: 23 FRK-LKVKVVRHANETNEAVNAMMELMVGKRIGLDAEWEIIRGTAGRQVGRSKVNTIQIA 81
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
+ ++N V ++ + + + S+ LK L V I G K DLI +
Sbjct: 82 YR----------DTNHDVTVII-VRTERMTSLPNRLKSLLVGSSIKIAGNKVSADLIKIG 130
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYN-HLHHKQLGRKLPKETKSLANICKELLDISLSKE 179
F D+ + +++N + K G SL + K LL I L K+
Sbjct: 131 VDF-----DVAEIKSVDQKSRVNVFNLGMVAKHRGLVTNAAHVSLMYLAKVLLHIRLDKD 185
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
LQ S +S LT++Q Y A+D +E F
Sbjct: 186 LQTSGFSGESLTQDQLRYIAVDGAVSLEAF 215
>gi|312797485|ref|YP_004030407.1| zinc finger protein [Burkholderia rhizoxinica HKI 454]
gi|312169260|emb|CBW76263.1| Zinc finger protein [Burkholderia rhizoxinica HKI 454]
Length = 252
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FL D + LA+ LR G D T + + R++ ++E+R++LTRD +LL+ + I+
Sbjct: 94 FLADAHLGRLARLLRMAGFD--TLYDNRIDDRDVERIAAQEQRIVLTRDRELLKRRG-IE 150
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
+ Y V++L +QL EV L + + C CN PL ++ A
Sbjct: 151 HGCY-VRALDPLEQLREVAARLSLH-ARARPWRLCLHCNA-----PLRR---IDKADVLA 200
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + ++ +F C C ++YWEG+ +
Sbjct: 201 RVPPSVRERCDRFATCDVCGRIYWEGSHW 229
>gi|380485396|emb|CCF39387.1| 3'-5' exonuclease [Colletotrichum higginsianum]
Length = 732
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 20/138 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F P I+K+ D+++L D+G V D LH+ Q
Sbjct: 135 EVLNEVFADPSIVKVFHGAFMDMVWLQR-------DLGL-YVNGLFDTGMACEVLHYPQ- 185
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
KSLA + K+ ++ K+ Q +DW RPL+EE YA D H L+ I++ +
Sbjct: 186 --------KSLAFLLKKFVNFDADKKYQLADWRVRPLSEEMLYYARSDTHYLLYIYDKMR 237
Query: 214 ---VKVAQKGNSCSSISE 228
V + +GN S E
Sbjct: 238 NELVMKSDRGNPGSDYIE 255
>gi|3851581|gb|AAC72359.1| Wrn protein [Mus musculus]
Length = 988
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCVS----------ENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVAN--------EKLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|167620778|ref|ZP_02389409.1| hypothetical protein BthaB_31024 [Burkholderia thailandensis Bt4]
Length = 251
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQ-TSKEKRVLLTRDAKLLRHQYL 416
+F+ D + GLA+ LR G D P +LI+ +++ R++LTRD +LL+ +
Sbjct: 97 RFIADAHLGGLAQLLRLAGFDTL---YDNHYPDDLIEAIAARDARIVLTRDRELLKRR-T 152
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
I + Y V++L QL E+ + L S + C CN PL ++ A+
Sbjct: 153 ITHGCY-VRALKPQAQLCELFDRLDLAGSA-RPFRLCLSCNA-----PLRR---IDPAEV 202
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
R P + ++ +F C C +++WEG+ + ++ ID
Sbjct: 203 EGRAPQGVLQRHTRFVTCDVCRRVFWEGSHWQR-MRALID 241
>gi|73539923|ref|YP_294443.1| hypothetical protein Reut_A0217 [Ralstonia eutropha JMP134]
gi|72117336|gb|AAZ59599.1| Protein of unknown function DUF82 [Ralstonia eutropha JMP134]
Length = 247
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR +G D T E E+ +E R++LTRD +LL+ + I
Sbjct: 97 RFVADAHLGGLAHLLRMMGFD--TLYDNHFEDSEIERIAEREGRIVLTRDRELLKRRG-I 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V+++ Q+ E+ + L S + S C CN +P++ + +
Sbjct: 154 THGCY-VRAIKSTPQVREIFQRLDLARSA-RPFSLCLDCNVPL--QPVARDVVAD----- 204
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + +++ +F C C +++WEG+ +
Sbjct: 205 -RVPPAVLERHDRFVTCDGCRRVFWEGSHW 233
>gi|148703462|gb|EDL35409.1| Werner syndrome homolog (human) [Mus musculus]
Length = 1385
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVAN--------EKLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|317152629|ref|YP_004120677.1| 3'-5' exonuclease [Desulfovibrio aespoeensis Aspo-2]
gi|316942880|gb|ADU61931.1| 3'-5' exonuclease [Desulfovibrio aespoeensis Aspo-2]
Length = 203
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 38/207 (18%)
Query: 3 CTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQ 62
C Y P+ V TE + T R + +L+G D E +P SL+QLA
Sbjct: 26 CHYEGPVA---VVRTEK-QRTQALREMEGETLLGFDTETRPVFKKGKRPGPPSLIQLA-- 79
Query: 63 PGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSST 122
AS V++ ++ +PL L +L +++K G + D++ L
Sbjct: 80 ------------TASCVYVFQINLLPL---CNGLCDLLADKEVIKTGVAVRDDILGLQKM 124
Query: 123 FCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQC 182
GF + ++D++ I +T L N+ LL +SK QC
Sbjct: 125 -------AGFTP-QQFIDLSDITAAARM---------QTHGLRNMAANLLGFRISKSAQC 167
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIF 209
S+W+ LT +Q YAA DA E++
Sbjct: 168 SNWAKEHLTPQQITYAATDAWISRELY 194
>gi|374853136|dbj|BAL56052.1| hypothetical conserved protein [uncultured prokaryote]
Length = 145
Score = 54.3 bits (129), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 364 MVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYR 423
M+ LA+ LR +G DAA R + L+ + E RVLLTRD +L Q + Q
Sbjct: 1 MLGRLARWLRLLGYDAAYDR--QASDHALVRRARAESRVLLTRDRRLAARQGI---QALL 55
Query: 424 VKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDC 483
+ S +Q+ +V +A L D +SRC CN + + EAV R+P
Sbjct: 56 IISENLEEQVHQVRQA--LGQPPDPPLSRCPACNTPLLP---TAREAVR-----DRVPPY 105
Query: 484 LFDKNLQFWQCMDCNQLYWEGTQ 506
++ + +F C C+++YW GT
Sbjct: 106 VWRRQREFRLCPGCHRVYWPGTH 128
>gi|347966136|ref|XP_321572.5| AGAP001549-PA [Anopheles gambiae str. PEST]
gi|333470194|gb|EAA01810.5| AGAP001549-PA [Anopheles gambiae str. PEST]
Length = 824
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 6 RKPLK---IHLVTSTESPEFT--HLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
R PL+ +H++ + + L R + +++G D EW S+Q V+LLQLA
Sbjct: 43 RDPLRGQQVHIINTADDCRMIVEKLQRHCQEYNVLGFDCEWV---SNQGKRRPVALLQLA 99
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
G +++ L ++ IP + L +L +I+K+G +D L
Sbjct: 100 SHRGL----------CALIRLCMINRIP-----QELYDLLNDDNIIKVGVSPYEDARVLR 144
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK-- 178
+ +VE LD+ + + + E +A + E+L ++L K
Sbjct: 145 EDYRL--------KVESTLDL---------RYMAERAGLEPLGIARLANEVLGLTLDKHW 187
Query: 179 ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
+++CSDW + L++ Q YAA DAH +E+F K+
Sbjct: 188 KVRCSDWESPELSDRQIKYAASDAHVAVEMFKKLSYKL 225
>gi|83719003|ref|YP_443618.1| hypothetical protein BTH_I3123 [Burkholderia thailandensis E264]
gi|167582664|ref|ZP_02375538.1| hypothetical protein BthaT_31264 [Burkholderia thailandensis TXDOH]
gi|83652828|gb|ABC36891.1| Protein of unknown function family [Burkholderia thailandensis
E264]
Length = 251
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQ-TSKEKRVLLTRDAKLLRHQYL 416
+F+ D + GLA+ LR G D P +LI+ +++ R++LTRD +LL+ +
Sbjct: 97 RFIADAHLGGLAQLLRLAGFDTL---YDNHYPDDLIEAIAARDARIVLTRDRELLKRR-T 152
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
I + Y V++L QL E+ + L S + C CN PL ++ A+
Sbjct: 153 ITHGCY-VRALKPQAQLRELFDRLDLAGSA-RPFRLCLSCNA-----PLRR---IDPAEV 202
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
R P + ++ +F C C +++WEG+ + ++ ID
Sbjct: 203 EGRAPQGVLQRHTRFVTCDVCRRVFWEGSHWQR-MRALID 241
>gi|2130973|dbj|BAA20269.1| WRN typeI [Mus musculus]
gi|2130975|dbj|BAA20270.1| WRN typeII [Mus musculus]
Length = 1401
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|390941796|ref|YP_006405557.1| ribonuclease D [Belliella baltica DSM 15883]
gi|390415224|gb|AFL82802.1| ribonuclease D [Belliella baltica DSM 15883]
Length = 200
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFN 68
+I LV S + + + LS L+G D E KP R N+ VSLLQL
Sbjct: 22 EIVLVNSMDQVQ--EVVDELSMHDLIGFDTETKPAFRKGVYNY--VSLLQL--------- 68
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYL---SSTFCS 125
S + V FL+ L+ I LP + ++++ P +LK+G DL L + F
Sbjct: 69 -----STSDVAFLIRLNEIGLP---KEIQKIMEDPSVLKIGAAVLDDLRALRKHAEDFTP 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ D+ + + +G + N+ +L+I +SK Q S+W
Sbjct: 121 AS----------FFDLNDQLKKVGFQNIGVR---------NLAAMVLEIRISKSEQVSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE+Q YAA DA +EI+ Q
Sbjct: 162 EAPTLTEKQMLYAATDAWVCLEIYKKLQ 189
>gi|440301398|gb|ELP93784.1| hypothetical protein EIN_175710 [Entamoeba invadens IP1]
Length = 190
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 35/181 (19%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPE------PRELIDQTSKEKRVLLTRDAKLL 411
KFL D M L LR +G DA + + + + LI + +E RVLLT D ++
Sbjct: 10 KFLVDEMHNKLCVWLRLLGYDAKGSKDYEVKYGPSVADKNLIVEALEEGRVLLTGDKQMF 69
Query: 412 RHQYLIKNQIYRVKSLL--KNQQLLEVIEAFQLKISEDQLMSR----------------C 453
+I ++ R L KN + ++ Q + E+QL++ C
Sbjct: 70 E---IITDKAQRQNKQLTYKNTNIPHAVKIRQ-DVPENQLIALHKVIPLEYNLNFDAMCC 125
Query: 454 TKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQK 513
T C G+ ++ E E +G ++ D +F+ QFW+C C +++W G+Q N V
Sbjct: 126 TDCGGKNVKV-----ENKEDVRG--KVVDGVFNDVDQFWKCSKCGKVFWVGSQTKNIVAS 178
Query: 514 F 514
F
Sbjct: 179 F 179
>gi|2645409|gb|AAB87366.1| homolog of human Werners syndrome protein [Mus musculus]
Length = 643
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ I+
Sbjct: 206 YAATDAYAGFIIY 218
>gi|7595900|gb|AAF64490.1|AF241636_1 WRN protein [Mus musculus]
Length = 1401
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|253989912|ref|YP_003041268.1| ribonuclease d (rnase d) [Photorhabdus asymbiotica]
gi|211638250|emb|CAR66874.1| ribonuclease d (rnase d) [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781362|emb|CAQ84524.1| ribonuclease d (rnase d) [Photorhabdus asymbiotica]
Length = 375
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 38/195 (19%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+ LD E+ R++ +P++ L+QL D S++ L++++ W+
Sbjct: 25 IALDTEFVRTRTY---YPQLGLIQL-----------YDGEQLSLIDPLNITN------WQ 64
Query: 95 LLKELFVSPDILKLGFKFKQDL-IYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
+EL +P ILK +DL ++L++ C EP +D + + H
Sbjct: 65 PFRELITNPQILKFLHAGSEDLEVFLNAFQCLP---------EPMIDTQVLAAFIGHPL- 114
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+ A + E + + L K +DW RPL+E+Q YAA D + L+ + +I
Sbjct: 115 -------SCGFAALVAEYIHVELDKSESRTDWLARPLSEKQCEYAAADVYYLLPLADILI 167
Query: 214 VKVAQKGNSCSSISE 228
Q G ++I E
Sbjct: 168 TATTQAGYMEAAIGE 182
>gi|145546781|ref|XP_001459073.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426896|emb|CAK91676.1| unnamed protein product [Paramecium tetraurelia]
Length = 403
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 31/183 (16%)
Query: 35 VGLDAEW---KPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
G+D E PQ S +V LLQ+A P+ +F+L+ +++
Sbjct: 247 TGIDTESFQEIPQTKFTSRMNKVCLLQIAL-------PQK-------IFILNSANLTSSC 292
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
++ + + + LK+G +QD + L + G + ++++ ++
Sbjct: 293 KYQQFLVKYATSNALKIGQNLRQDFLSLLGQIRASGVQLN-----QIIELSELF------ 341
Query: 152 QLGRKLPKETKS-LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+K P+E K+ L+ C +LL L K Q S+W RPL Q +YAA+DA+ + ++N
Sbjct: 342 --QQKFPQEKKTNLSFQCSKLLGKELDKVEQISNWQRRPLRNAQIHYAALDAYICLHLYN 399
Query: 211 IFQ 213
+++
Sbjct: 400 LYK 402
>gi|320167779|gb|EFW44678.1| exosome component 10 protein [Capsaspora owczarzaki ATCC 30864]
Length = 945
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
E AR LS S +D E RS Q V L+Q++ + VV
Sbjct: 301 ELIDFARRLSSVSEFAIDLEHHSYRSLQGF---VCLMQVSTR------------TEDVV- 344
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
+ ++ + S L+E+F +P+ILK+ D+++L F
Sbjct: 345 ---IDTLAVRSSMHHLREVFANPNILKVFHGADMDVVWLQHDFG---------------- 385
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
I +I N Q R L + SLA++ + +++ K+ Q +DW RP+ E YA
Sbjct: 386 IYTI-NMFDTGQAARVLELGSYSLAHLLRYFCNVTADKKYQLADWRIRPIPAEMLQYARE 444
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCSSI 226
D H L+ I++ + ++ + N S++
Sbjct: 445 DTHYLLYIYDRLRNELVSRSNESSNL 470
>gi|152990031|ref|YP_001355753.1| hypothetical protein NIS_0282 [Nitratiruptor sp. SB155-2]
gi|151421892|dbj|BAF69396.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 151
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
F+ DV + LAK+LR +G D T E EL+ ++KR++L++D +L
Sbjct: 6 FVADVHLAKLAKYLRLLGFD--TLYFNHIEDNELLHIAKEQKRLILSKDKRLCERD---- 59
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTE---EAVEAAK 475
+ + LL ++ LE Q+K +++ RC+ + + L E +E K
Sbjct: 60 ----KKRCLLITEKDLEA----QIK----EVLQRCSNLKCKPFSRCLVDNIPLEPIEKGK 107
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID-VC 518
R+P + QFW C C ++YW G+ Y +++FI+ VC
Sbjct: 108 ILDRLPPKVKRYYTQFWICPTCGRIYWHGSHY-EKMKRFIEQVC 150
>gi|268532256|ref|XP_002631256.1| C. briggsae CBR-CRN-3 protein [Caenorhabditis briggsae]
Length = 868
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 25/145 (17%)
Query: 80 FLLDLSSIPLPSIWE---LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
F++D P P +W+ +L E F +P+ILK+ D+++L F ++ FD
Sbjct: 321 FIID----PFP-MWDRIGILNEPFTNPNILKVFHGSDNDVLWLQRDFGVHVVNL-FD--- 371
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ K+L K PK SLA + D+ L K+ Q +DW RPL N
Sbjct: 372 ---------TYVAMKKL--KYPK--FSLAYLAFRFADVVLDKQYQLADWRARPLRNAMIN 418
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGN 221
YA D H L+ +++ + ++ Q+G+
Sbjct: 419 YAREDTHYLLYSYDMLREQLLQQGH 443
>gi|386003040|ref|YP_005921339.1| hypothetical protein Mhar_2366 [Methanosaeta harundinacea 6Ac]
gi|357211096|gb|AET65716.1| hypothetical protein Mhar_2366 [Methanosaeta harundinacea 6Ac]
Length = 150
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 23/161 (14%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE---LIDQTSKEKRVLLTRDAKLLRHQ 414
++L D+M+ LA+ LR G D + P PE + L++ KE R LLTRD L R
Sbjct: 4 RYLADLMLLRLARWLRMAGHDVSNP----PEGSDDSGLLEVALKEGRTLLTRDRLLARRC 59
Query: 415 YLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
++S ++QL E++ A ++ + RCT CNG VEA+
Sbjct: 60 GKAGASCILIRSSDLDEQLRELLAA---GVTLEMNPERCTLCNGIL--------RKVEAS 108
Query: 475 KGFQRI-PDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
+ P+ D + W+C C ++YW GT + ++
Sbjct: 109 GAYGSPGPE---DAD-SLWRCEVCGKIYWRGTHWQGIRERL 145
>gi|50286743|ref|XP_445801.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525107|emb|CAG58720.1| unnamed protein product [Candida glabrata]
Length = 737
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
+ + L +SS + +D E RS+ + V L+Q++ + +++D
Sbjct: 225 MMQELKKSSEIAVDLEHHDFRSY---YGLVCLMQISTRTQD--------------YIVD- 266
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L ++L E+F +P I K+ D+I+L D+G L I S+
Sbjct: 267 -TIALRDDLKMLNEVFTNPLITKVFHGAFMDIIWLQR-------DLG-------LYIVSL 311
Query: 145 YNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
++ H K LG LPK SLA + ++ + SK+ Q +DW RPL++ YA D H
Sbjct: 312 FDTFHASKALG--LPKH--SLAYLLEKYANFKTSKKYQLADWRRRPLSKAMMAYARADTH 367
Query: 204 CLIEIFN 210
L+ IF+
Sbjct: 368 FLLNIFD 374
>gi|365985620|ref|XP_003669642.1| hypothetical protein NDAI_0D00850 [Naumovozyma dairenensis CBS 421]
gi|343768411|emb|CCD24399.1| hypothetical protein NDAI_0D00850 [Naumovozyma dairenensis CBS 421]
Length = 790
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
+ ++ L S + L E F +P I K+ D+I+L D+G L I S
Sbjct: 286 VDTLKLRSHLQPLNEPFTNPQITKVLHGAFMDIIWLQR-------DLG-------LYIVS 331
Query: 144 IYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+++ H + LG PK SLA + ++ + SK+ Q +DW RPL++ +YA D
Sbjct: 332 LFDTFHASRALG--FPK--NSLAYLLEKFSNFKTSKKYQMADWRIRPLSKAMNSYARSDT 387
Query: 203 HCLIEIFNIFQVKVAQKGNSCSSISE 228
H L+ IF+ + K+ Q G + E
Sbjct: 388 HFLLNIFDQMRNKLVQDGKLAGVLKE 413
>gi|298530281|ref|ZP_07017683.1| protein of unknown function DUF82 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509655|gb|EFI33559.1| protein of unknown function DUF82 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 240
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ DV V LA LR +G D S R++ ++E+R++L+RD LL+ + ++
Sbjct: 94 RFIADVNVGKLAMLLRMLGQDTLWDNSYSD--RQVAVLAARERRIVLSRDRGLLKRKEIM 151
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
++ +++ + QL EV + L ++ SRC +CN + +P+ E ++ K
Sbjct: 152 HGRL--IRACNPDDQLREVARIYGLDLTCS--FSRCLRCNQ--VLEPVPKSEIIQRLKPR 205
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
R FD F C C ++YW G+ + + D
Sbjct: 206 TRK---YFD---YFEICPGCERIYWRGSHWEKMCSRIQDA 239
>gi|74227079|dbj|BAE38334.1| unnamed protein product [Mus musculus]
Length = 789
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCVS----------ENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|452837795|gb|EME39736.1| hypothetical protein DOTSEDRAFT_138360 [Dothistroma septosporum
NZE10]
Length = 784
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+FV P I+K+ D+++L D+G L I +++ H+ R
Sbjct: 286 LNEVFVDPSIVKVLHGAYMDIVWLQR-------DLG-------LYIVGLFD-THYA--AR 328
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L SLA + K+ +D K+ Q +DW RPL +E +YA D H L+ IF+ + +
Sbjct: 329 ALGYTGGSLAFLLKKFIDFDAQKQYQMADWRIRPLPQELFDYARSDTHFLLYIFDNMRNE 388
Query: 216 VAQKGN 221
+ Q+ +
Sbjct: 389 LVQRSD 394
>gi|348510943|ref|XP_003443004.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Oreochromis niloticus]
Length = 640
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 82/190 (43%), Gaps = 30/190 (15%)
Query: 25 LARALSQSSLVGLDAEW--KPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLL 82
+ + LS ++G D EW S + VSLLQ+A G +V LL
Sbjct: 113 MQKELSVFPVLGFDCEWVKTSAVSAKGKAAVVSLLQMASYSG----------LCILVRLL 162
Query: 83 DLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF-CSQGCDIGFDRVEPYLDI 141
S P L+ E+ +P ILK+G +D L+ + S C + +
Sbjct: 163 PFRSSQQPFPHSLM-EVLRNPHILKVGVGCYEDGKRLTRDYGLSLTCTVDLRHLALRQKQ 221
Query: 142 TSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAA 199
TS+ N L SL ++ ++L ISL K E++CSDW LT+EQ YAA
Sbjct: 222 TSVSNGL--------------SLKSLAADVLKISLDKSPEVRCSDWEADQLTQEQMTYAA 267
Query: 200 IDAHCLIEIF 209
DA I +F
Sbjct: 268 RDAQVSIALF 277
>gi|409425711|ref|ZP_11260292.1| hypothetical protein PsHYS_14027 [Pseudomonas sp. HYS]
Length = 246
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + +++ R++LTRD +LL+ + +I
Sbjct: 97 RFIADAHLGGLASLLRMSGFD--TLYDNGFEDAEIAEIAAQQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL E+ E L S + S C CN +PL E + E A+
Sbjct: 154 SHGCY-VHALKPSLQLRELYERLDLARSA-RPFSLCLHCN-----QPLH-EISPELAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
++P + QF +C C ++YWEG+ +
Sbjct: 204 PQVPPRIGALYSQFLRCDACQRVYWEGSHWRG 235
>gi|354566787|ref|ZP_08985958.1| 3'-5' exonuclease [Fischerella sp. JSC-11]
gi|353544446|gb|EHC13900.1| 3'-5' exonuclease [Fischerella sp. JSC-11]
Length = 313
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
+Q S++ +D E ++S PR+SL+Q+ P + + +++LD+ +P
Sbjct: 24 FTQRSILWIDTEVA---DYKSKNPRLSLIQVLDDPT--------DMSGDRIYILDVLDLP 72
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNH 147
+ + + ++ ++P I K+ D+ +L + C + + PY I + N+
Sbjct: 73 -DIVADFIAQIMINPAIEKVFHNASYDVKFLGNKKAKNVTCTLDMAKKIPYY-ILPLPNY 130
Query: 148 LHHKQLGRKLPKETKSLAN-ICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ K+LAN +CK L + K+ Q SDW RPLTEEQ YA +D L
Sbjct: 131 ------------KLKTLANKLCKFL---HVDKQEQTSDWGQRPLTEEQIEYAYLDCIYLA 175
Query: 207 EIFNIFQVKVAQKGNSCSSISEL 229
++ + +++ QK N I +L
Sbjct: 176 QVHSRL-IELNQKNNPDPEIEDL 197
>gi|401623674|gb|EJS41765.1| rrp6p [Saccharomyces arboricola H-6]
Length = 733
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 42/238 (17%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L+D +I L +L E+F P I+K+ D+I+L D+G L
Sbjct: 263 YLVD--TIELRENLHILNEVFTDPSIIKVFHGAFMDIIWLQR-------DLG-------L 306
Query: 140 DITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
I S+++ H K +G LP+ SLA + + + SK+ Q +DW RPL++ YA
Sbjct: 307 YIVSLFDTYHASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYA 362
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGIL-EKPDIGNKTVRFKLC 257
D H L+ I++ + K+ + L G+L E ++ + RF+
Sbjct: 363 RADTHFLLNIYDQLRNKLIESN----------------KLAGVLYESRNVAKR--RFEYS 404
Query: 258 EALDIIRATSYYSQCLPEGVVSRVSY-LNTMPMDESLVKIVRKYGEKILLRECDKAPK 314
+ + ++ YS E + Y N P E LVK + ++ + ++ R D++P+
Sbjct: 405 KYRPLTPSSKVYSPIEKENPWRVLMYQYNIAPEREVLVKNLYQWRD-VIARRDDESPR 461
>gi|329956986|ref|ZP_08297554.1| 3'-5' exonuclease [Bacteroides clarus YIT 12056]
gi|328523743|gb|EGF50835.1| 3'-5' exonuclease [Bacteroides clarus YIT 12056]
Length = 210
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ + + E L Q S++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVIQTPQEAE--RAVAYLKQCSILGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPIIM-----LLENPGVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ C + ++ R + KSL I L +SK + S+W
Sbjct: 121 RAC-------------------IELQEYVRTFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LT Q+ YAA DA + I+N Q
Sbjct: 162 EAEVLTPSQQQYAATDAWACLNIYNRLQ 189
>gi|157133260|ref|XP_001656205.1| 3-5 exonuclease [Aedes aegypti]
gi|108870910|gb|EAT35135.1| AAEL012690-PA [Aedes aegypti]
Length = 771
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 43/206 (20%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++G D EW + Q V+LLQLA G +++ L ++ IP P +
Sbjct: 71 VLGFDCEWV---NEQGKRHPVALLQLATHRGL----------CALIRLCEMKRIP-PELG 116
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
ELL + P I+K+G +D L + +VE LD+ + + +
Sbjct: 117 ELLND----PAIVKVGVGPLEDAKLLRHDYNL--------KVESTLDLRHLAD-----RC 159
Query: 154 GRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
G P +A + ++ L + L K ++ S+W N LTE Q YAA DAH +E+F
Sbjct: 160 GVPGPY---GMAKLAEKTLGVKLDKHWRIRASNWENAQLTERQIQYAASDAHVAVELFRT 216
Query: 212 FQVKV-------AQKGNSCSSISELD 230
F K +QK +I+EL+
Sbjct: 217 FAKKAVPRSLFSSQKSWLTKTINELE 242
>gi|346227088|ref|ZP_08848230.1| 3'-5' exonuclease [Anaerophaga thermohalophila DSM 12881]
gi|346227138|ref|ZP_08848280.1| 3'-5' exonuclease [Anaerophaga thermohalophila DSM 12881]
Length = 192
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 40/200 (20%)
Query: 14 VTSTESP-EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
V E P + TH+ L ++G D E KP + V+LLQL+ +
Sbjct: 22 VNVIEDPKQITHVVEKLRNERIIGFDTETKPSFKKGVSHD-VALLQLSTE---------- 70
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQGCDI 130
+ +F L+++ L +L +P I K+G + DL L + F +G
Sbjct: 71 --EEAFLFRLNMTGFN-----GALTQLLSNPGIKKVGVGIRDDLRGLQHLNNFTPEG--- 120
Query: 131 GFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
++DI ++L K E SL ++ LL I +SK + S+W L
Sbjct: 121 -------FIDI---------QELAPKYGIEVLSLKDLAGLLLGIRISKRQRLSNWEADSL 164
Query: 191 TEEQKNYAAIDAHCLIEIFN 210
+E Q YAA DA ++I+N
Sbjct: 165 SEGQILYAATDAWVALKIYN 184
>gi|379733650|ref|YP_005327155.1| hypothetical protein BLASA_0107 [Blastococcus saxobsidens DD2]
gi|378781456|emb|CCG01106.1| conserved protein of unknown function [Blastococcus saxobsidens
DD2]
Length = 239
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 391 ELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM 450
+L+ + E RVLLT+D LL L+ + V+ + QL +V++ F ++ +
Sbjct: 121 DLVVRADAEDRVLLTQDRGLLMRSALVHGAL--VRGAAPDAQLADVLDRFAPALAP---L 175
Query: 451 SRCTKCNGRFIQKPLS-TEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
+RCT CNG + +P++ + A G +R D +F +C C ++YW G
Sbjct: 176 TRCTACNG--VLRPVAKVQVAALLEPGTRRSYD-------EFSRCAACGRVYWRGAH 223
>gi|427383689|ref|ZP_18880409.1| hypothetical protein HMPREF9447_01442 [Bacteroides oleiciplenus YIT
12058]
gi|425728394|gb|EKU91252.1| hypothetical protein HMPREF9447_01442 [Bacteroides oleiciplenus YIT
12058]
Length = 215
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L Q L+G+D+E +P + + +V+LLQ++
Sbjct: 21 PGRIHVVQTPWEAE--KAVTYLKQYPLLGIDSETRPSFTKGQSH-KVALLQVSS------ 71
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
E D +F L+ + + LP I L SP + K+G + D + L + F
Sbjct: 72 --EED----CFLFRLNQTGLTLPII-----SLLESPSVTKIGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ C + ++ R + KSL I L +SK + S+W
Sbjct: 121 RAC-------------------IELQEYVRMFGIQDKSLQKIYGILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAEHLTEPQKQYAATDAWACLNIYNRLQ 189
>gi|237721388|ref|ZP_04551869.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229449184|gb|EEO54975.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 219
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +I+++ S E L +++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAETE--KAVAYLQSRAVIGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|88602344|ref|YP_502522.1| hypothetical protein Mhun_1053 [Methanospirillum hungatei JF-1]
gi|88187806|gb|ABD40803.1| protein of unknown function DUF82 [Methanospirillum hungatei JF-1]
Length = 145
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 21/150 (14%)
Query: 364 MVEGLAKHLRCVGIDAATPRSKKP-EPRE---LIDQTSKEKRVLLTRDAKLLRHQYLIKN 419
M L K+LR +G D + P PRE ++ +EKR++LT+DA+L R N
Sbjct: 1 MAGSLCKYLRFMGYDCRSANDLPPGNPREDTDILKIAGEEKRIILTQDAELARRGE--GN 58
Query: 420 QIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQR 479
I V S L Q+ ++++A I + ++RC++CN +Q+ S E+
Sbjct: 59 AIRLVSSDLA-AQIRQLVQAGL--IHPEIRLTRCSRCNA-LLQEGTSPEK---------- 104
Query: 480 IPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
P+ +++ C CN+ YWEGT N
Sbjct: 105 -PNTPIPEDIPLVYCPVCNRQYWEGTHTKN 133
>gi|414886886|tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 960
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 36/204 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ HLAR L + +D E Q S +S +L+Q++ Q + +
Sbjct: 146 QLEHLARLLGEERAFAVDTE---QHSIRSFLGYTALMQISTQ--------------NEDY 188
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L + +L+ +F + I K+ D+++L F ++
Sbjct: 189 LID--TIALHDVMGILRPVFANSSICKIFHGADNDILWLQRDF--------------HIY 232
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ ++++ ++ L K KSLA + + +++ K +Q DW RPLT E YA
Sbjct: 233 VVNMFDTAKACEI---LLKPQKSLAYLLEVYCEVTTDKTMQREDWRLRPLTPEMIEYART 289
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCS 224
DAH L+ I N ++ K + S
Sbjct: 290 DAHYLLYIANCLASELHAKAYTSS 313
>gi|167765134|ref|ZP_02437247.1| hypothetical protein BACSTE_03520 [Bacteroides stercoris ATCC
43183]
gi|167696762|gb|EDS13341.1| 3'-5' exonuclease [Bacteroides stercoris ATCC 43183]
Length = 210
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + + E L + S++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPQEAE--RAVAYLKKCSILGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPVI-----TLLETPAVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+GC + ++ R + +SL I L +SK + S+W
Sbjct: 121 RGC-------------------IELQEYVRTFGIQDRSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LT Q+ YAA DA + I+N Q
Sbjct: 162 EADVLTPSQQQYAATDAWACLNIYNRLQ 189
>gi|222478876|ref|YP_002565113.1| hypothetical protein Hlac_0441 [Halorubrum lacusprofundi ATCC
49239]
gi|222451778|gb|ACM56043.1| protein of unknown function DUF82 [Halorubrum lacusprofundi ATCC
49239]
Length = 179
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 25/185 (13%)
Query: 345 PPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVL 403
P D + D P+ L D M LA +LR G DAA + E + ++ + E R L
Sbjct: 2 PTDDRAAADDEPPRVLLDAMCGKLATYLRMCGYDAAYALDRGVEADDQVLALAAAEARTL 61
Query: 404 LTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM---SRCTKCNGRF 460
+TRD +L + + LL + +L+ + S L+ +RC CNGR
Sbjct: 62 ITRDRELAAR---TGDAV-----LLTERDVLDQLREVAAAGSPVALVDEPTRCGACNGRV 113
Query: 461 IQ-----------KPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
+ +P + V A + PD W+C DC + +W+G+ + +
Sbjct: 114 DRVSASDSADPDDRPEYVPDDVGTAGAPESEPDTA--DTRPAWRCRDCGRWFWKGSHWES 171
Query: 510 AVQKF 514
++
Sbjct: 172 IAERL 176
>gi|197123674|ref|YP_002135625.1| hypothetical protein AnaeK_3276 [Anaeromyxobacter sp. K]
gi|196173523|gb|ACG74496.1| protein of unknown function DUF82 [Anaeromyxobacter sp. K]
Length = 252
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+ + D + LA+HLR +G D EL + E R+LLTRD LL+ + +
Sbjct: 97 RLVLDGHLGRLARHLRMLGFDVRW--WSDAADAELAAVAAAEGRILLTRDQGLLKRRVVT 154
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
Y V++ +QL EV+ L + RC +CN +P+ A EA G
Sbjct: 155 HG--YWVRATDPRRQLTEVVRRLDLARAVAPF-RRCLRCNTSL--EPV----APEAVAG- 204
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
R+P + ++ F +C C+++YW G+ +H +++ +
Sbjct: 205 -RVPPAVRARHHAFRRCPSCDRIYWAGS-HHRRMERLV 240
>gi|330926290|ref|XP_003301407.1| hypothetical protein PTT_12892 [Pyrenophora teres f. teres 0-1]
gi|311323973|gb|EFQ90519.1| hypothetical protein PTT_12892 [Pyrenophora teres f. teres 0-1]
Length = 796
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F P ILK+ D+I+L D+G L I +++ H
Sbjct: 278 ECLNEVFADPSILKVLHGAFMDIIWLQR-------DLG-------LYIVGLFDTFH---A 320
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L + SLA + + ++ K+ Q +DW RPL++E YA D H L+ IF+ +
Sbjct: 321 ARALGYQAASLAYLLELHVNFKAQKQYQLADWRQRPLSKELFEYARADTHFLLYIFDNMR 380
Query: 214 VKVAQKGN 221
++ K +
Sbjct: 381 NELVNKSD 388
>gi|293334477|ref|NP_001168997.1| uncharacterized protein LOC100382828 [Zea mays]
gi|223974363|gb|ACN31369.1| unknown [Zea mays]
Length = 98
Score = 53.5 bits (127), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
T L+ + KE+L L+K + S+W RPLT+ QK YAA+DA L+ IF+ + AQ G
Sbjct: 13 TGGLSGLSKEILGAGLNKTRRNSNWEQRPLTQNQKEYAALDAVVLVHIFHEHMRRQAQFG 72
Query: 221 NSCSSISELDS 231
S S E S
Sbjct: 73 VSEGSRVEWRS 83
>gi|383860961|ref|XP_003705955.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Megachile rotundata]
Length = 589
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 46/222 (20%)
Query: 6 RKPLKIHL--VTSTESPEFTHLA----RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQL 59
+K LKI L + ++PE A R + ++G D EW N V+LLQL
Sbjct: 43 KKELKITLDKIILADTPEKCDYAIQCIRCNLSNGVLGFDCEW-------VNEGPVTLLQL 95
Query: 60 ACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYL 119
A G + + + IP LKEL S ILK+G +D +
Sbjct: 96 ATFNGV----------CGLFRIGKIGYIPYK-----LKELLASKHILKVGVASYEDAQKI 140
Query: 120 SSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK- 178
+ + GC +V LD+ ++ H++ LP KSLA + E L++ + K
Sbjct: 141 IADY---GC-----KVSGTLDLRTLAEHVN-------LP-SPKSLAAMSLEYLNLEMDKL 184
Query: 179 -ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E++CS+W LT+EQ YAA DA + I++ ++ +K
Sbjct: 185 IEVRCSNWDAGTLTDEQVAYAACDAIASVLIYDQIVQRIKEK 226
>gi|255566405|ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 977
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 43/227 (18%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TES + L LS S+ +D E Q S +S +L+Q++ Q
Sbjct: 128 TES-QLKELTDELSNQSVFAVDTE---QHSLRSFLGFTALVQISTQKED----------- 172
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
+LLD +I L +L +F +P I K+ D+++L F
Sbjct: 173 ---YLLD--TIALHDAMGILGAVFANPKICKVFHGGDNDILWLQRDF------------- 214
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + ++++ ++ L K KSLA + + +S +K LQ DW RPL E
Sbjct: 215 -HIYVVNLFDTAKACEV---LSKPQKSLAYLLETYCGVSTNKLLQREDWRQRPLPAEMLQ 270
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILE 243
YA DAH L+ I + ++ QK N S S D+ LK ILE
Sbjct: 271 YALTDAHYLLYIASCLIAELKQKDNDNS------YSYPDVKLKFILE 311
>gi|367031894|ref|XP_003665230.1| hypothetical protein MYCTH_2308740 [Myceliophthora thermophila ATCC
42464]
gi|347012501|gb|AEO59985.1| hypothetical protein MYCTH_2308740 [Myceliophthora thermophila ATCC
42464]
Length = 860
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
+P E+L E+F P I+K+ D+I+L D+G L I +++
Sbjct: 283 VPWRHKLEVLNEVFADPKIVKVLHGAFMDVIWLQR-------DLG-------LYIVGLFD 328
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ L KSLA + K+ D K+ Q +DW RPL EE YA D H L+
Sbjct: 329 TFYASDT---LGYAGKSLAFLLKKFADFDADKKYQLADWRIRPLPEEMFYYARSDTHFLL 385
Query: 207 EIFNIFQVKVAQ 218
I+++ + ++A+
Sbjct: 386 YIYDMLRNELAE 397
>gi|307104422|gb|EFN52676.1| hypothetical protein CHLNCDRAFT_54323 [Chlorella variabilis]
Length = 529
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 38/205 (18%)
Query: 31 QSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL- 89
Q S V +D EWKP+ RV+L+QLA +A+V L+ + +
Sbjct: 153 QDSCVAIDLEWKPEGWAGGGPTRVALMQLA--------------SATVAVLVRVCRLGFR 198
Query: 90 --PSIWELLKELFVSPDILKLGFKF-KQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
PS L+ PD+ +GF + D + + TF +G F R +LD+ +
Sbjct: 199 MPPS----LRAFLSDPDLTFIGFSWDSSDEVKMRQTF-GEGRRELFPR---FLDLQQVGA 250
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHC 204
L + G LA + K +L +L K ++ S+W R L+ Q Y A+DA
Sbjct: 251 SLGYHGFG---------LAALTKRVLGFALPKCRKVTMSNWEARQLSARQVQYGALDAVV 301
Query: 205 LIEIFNIFQVKVAQKGNSCSSISEL 229
IF ++ A ++C++ ++
Sbjct: 302 TGHIFRGLRLWHASP-SACTACRQM 325
>gi|294790936|ref|ZP_06756094.1| putative ribonuclease D [Scardovia inopinata F0304]
gi|294458833|gb|EFG27186.1| putative ribonuclease D [Scardovia inopinata F0304]
Length = 433
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
LA + ++ L ++L+KE +DWS RPL + +NYAA+D LIE+ N ++ + G
Sbjct: 128 GLAAVTEKYLGLTLAKEHSAADWSYRPLNRDMRNYAALDVEVLIELRNTLSAELRRSG 185
>gi|324501716|gb|ADY40761.1| Exosome component 10 [Ascaris suum]
Length = 892
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 88 PLPSIW---ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
P P IW ++L E F +P+ILK+ + D+ +L F G + + +
Sbjct: 325 PFP-IWNDMQILNEPFTNPNILKVFHGSEYDVQWLQRDF---GIYV--------VGMFDT 372
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+ +H + SLA++ + + +++L KELQ +DW RPLT YA D H
Sbjct: 373 FCAMHVLNFAKY------SLAHLVQSICNVTLDKELQKADWRVRPLTTAHIEYARSDTHY 426
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKP 245
L+ ++ + ++ +GN +++ + L + + +KP
Sbjct: 427 LLYCYDTLRQRLINEGNESNNLLRSTYNESALICRTVYKKP 467
>gi|448317486|ref|ZP_21507039.1| hypothetical protein C492_13581 [Natronococcus jeotgali DSM 18795]
gi|445603387|gb|ELY57350.1| hypothetical protein C492_13581 [Natronococcus jeotgali DSM 18795]
Length = 154
Score = 53.1 bits (126), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSK-EKRVLLTRDAKLLRHQYL 416
+ L DVM GL +LR G D A + E + + +SK E R L+TRD +L
Sbjct: 2 EILLDVMCGGLVAYLRMCGHDTAYAGDRDLEADDALLASSKAEDRTLVTRDVQLATR--- 58
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ ++S QL E+ A + +S + SRC +CNG PL + +
Sbjct: 59 -ADASILLESREVETQLAELASA-GVDLSLEGDPSRCGRCNG-----PLEAVDPAASTPE 111
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+ PD W+C C Q +W G+ +
Sbjct: 112 YAPDPD-----EFAVWRCRGCGQHFWRGSHW 137
>gi|319957043|ref|YP_004168306.1| hypothetical protein Nitsa_1306 [Nitratifractor salsuginis DSM
16511]
gi|319419447|gb|ADV46557.1| protein of unknown function DUF82 [Nitratifractor salsuginis DSM
16511]
Length = 174
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P F+ D + LA+HLR G D T EL++ ++R+LLTRD R +L
Sbjct: 21 PAFIADAHLGKLARHLRFGGWD--TLYFPSIADGELLNLARIQERILLTRD----RGIHL 74
Query: 417 IKN-QIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
K +++R+++ L+E+ E F L + D +RC CN + +EA
Sbjct: 75 GKGVRLHRLEAEELLPALIELAETFDLADTYDPF-TRCMVCNTEL--------QPIEADA 125
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
++P + F C C ++YW G Y ++++ ++
Sbjct: 126 VRGKVPPLVSRHFHTFKTCPHCQRIYWPGDHYQRMLEEWKEI 167
>gi|320352196|ref|YP_004193535.1| 3'-5' exonuclease [Desulfobulbus propionicus DSM 2032]
gi|320120698|gb|ADW16244.1| 3'-5' exonuclease [Desulfobulbus propionicus DSM 2032]
Length = 210
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 45/208 (21%)
Query: 5 YRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQP 63
+R P +HLV ++E + A LS+++L+G D E +P R Q P SLLQLA
Sbjct: 27 WRGP--VHLVRTSE--DMALAAAHLSRAALLGFDTETRPAFRKGQKFSP--SLLQLATD- 79
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
SVV+L L I L + L+ + P I+K G DL L
Sbjct: 80 -------------SVVYLFQLQQIGLA---QPLRAILSDPTIIKAGVAPDFDLRSLGE-- 121
Query: 124 CSQGCDIGFDRVEP--YLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQ 181
+ EP ++D+ ++ R+ L + + + +SK +
Sbjct: 122 --------LEPFEPDGFVDLA---------RMARRRGVHNHGLRGLAALVCGVRISKSAR 164
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
++W+N LT +Q YAA DA EI+
Sbjct: 165 TTNWANAELTPQQIRYAATDAWIGREIY 192
>gi|417747935|ref|ZP_12396391.1| hypothetical protein MAPs_39640 [Mycobacterium avium subsp.
paratuberculosis S397]
gi|336460608|gb|EGO39501.1| hypothetical protein MAPs_39640 [Mycobacterium avium subsp.
paratuberculosis S397]
Length = 251
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA LR G D S + + L ++++ R+LLTRD LL+ + +
Sbjct: 100 PRFVVDVNLGRLAWLLRLFGFDVWW--SNDADDQTLAAISAEQHRILLTRDRGLLKRRAV 157
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
R +Q L VI L +SRC +CNG T AV +
Sbjct: 158 THGLFVRPDD--PEEQALGVIRRLDLT-GRLAPLSRCVRCNG--------TLTAVAKDEV 206
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P F +C C ++YW G+ +
Sbjct: 207 SDQLPPLTRRYYDDFSRCTRCGRIYWPGSHH 237
>gi|357601922|gb|EHJ63190.1| 3-5 exonuclease [Danaus plexippus]
Length = 382
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 84/207 (40%), Gaps = 39/207 (18%)
Query: 7 KPLKIHLVTSTESPE--FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPG 64
K L I++VT+ + + R + +G D EW + N ++LLQL+ G
Sbjct: 38 KNLDINIVTTKAQCDEVVNEMRRRSTLHQAIGFDCEWVTE---NGNRQPIALLQLSTFDG 94
Query: 65 PRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFC 124
++ L L +P+ LKEL +I K+G D YL +
Sbjct: 95 F----------CGLLRLNLLKEVPMS-----LKELLEDKNIYKVGVAPIDDAKYLIQDYS 139
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKE--LQC 182
V+ LD+ I H G LA + L I L K ++C
Sbjct: 140 IY--------VKSTLDLRHIVELTGHTAGG---------LAALANTYLGIVLDKNWRIRC 182
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIF 209
SDW+ LTE Q +YAA DA+ I+IF
Sbjct: 183 SDWAAEELTERQIHYAATDAYVAIKIF 209
>gi|254776995|ref|ZP_05218511.1| hypothetical protein MaviaA2_20321 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 253
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA LR G D S + + L ++++ R+LLTRD LL+ + +
Sbjct: 102 PRFVIDVNLGRLAWLLRLFGFDVWW--SNDADDQTLAAISAEQHRILLTRDRGLLKRRAV 159
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
R +Q L VI L +SRC +CNG T AV +
Sbjct: 160 THGLFVRPDD--PEEQALGVIRRLDLT-GRLAPLSRCVRCNG--------TLTAVAKDEV 208
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P F +C C ++YW G+ +
Sbjct: 209 SDQLPPLTRRYYDDFSRCTRCGRIYWPGSHH 239
>gi|3831454|gb|AAC69936.1| hypothetical protein [Arabidopsis thaliana]
Length = 237
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 36/194 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
LA L++ + +D E Q S +S +L+Q++ E D FL+D
Sbjct: 67 LAEILAKEQVFAVDTE---QHSLRSFLGFTALIQISTH-------EED-------FLVD- 108
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L + +L+ +F P+I K+ D+I+L F +
Sbjct: 109 -TIALHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDFH-----------------IYV 150
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
N + L K +SLA + + + ++ +K LQ DW RPL+EE YA DAH
Sbjct: 151 VNMFDTAKACEVLSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYARTDAHY 210
Query: 205 LIEIFNIFQVKVAQ 218
L+ I + ++ Q
Sbjct: 211 LLYIADSLTTELKQ 224
>gi|414886885|tpg|DAA62899.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 951
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 36/204 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ HLAR L + +D E Q S +S +L+Q++ Q + +
Sbjct: 146 QLEHLARLLGEERAFAVDTE---QHSIRSFLGYTALMQISTQ--------------NEDY 188
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L + +L+ +F + I K+ D+++L F ++
Sbjct: 189 LID--TIALHDVMGILRPVFANSSICKIFHGADNDILWLQRDF--------------HIY 232
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ ++++ ++ L K KSLA + + +++ K +Q DW RPLT E YA
Sbjct: 233 VVNMFDTAKACEI---LLKPQKSLAYLLEVYCEVTTDKTMQREDWRLRPLTPEMIEYART 289
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCS 224
DAH L+ I N ++ K + S
Sbjct: 290 DAHYLLYIANCLASELHAKAYTSS 313
>gi|345478840|ref|XP_001599044.2| PREDICTED: exosome component 10 [Nasonia vitripennis]
Length = 1163
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 19/147 (12%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L+D ++ L S +L E+F P ILK+ D+++L D+G
Sbjct: 686 YLID--TLTLRSELHVLNEIFTKPSILKVFHGADSDILWLQR-------DLGL------- 729
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
I N Q ++L SL+ + K +IS +K Q +DW RPL EE YA
Sbjct: 730 ---YIVNMFDTYQAAKQLGLPFLSLSYLLKTHCEISANKHFQLADWRIRPLPEELMKYAR 786
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSSI 226
D H L+ I +I + N S+I
Sbjct: 787 EDTHYLLYIKDILSNALIDSANGQSNI 813
>gi|291612860|ref|YP_003523017.1| hypothetical protein Slit_0389 [Sideroxydans lithotrophicus ES-1]
gi|291582972|gb|ADE10630.1| protein of unknown function DUF82 [Sideroxydans lithotrophicus
ES-1]
Length = 158
Score = 53.1 bits (126), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 12/158 (7%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FLCD M+ L ++LR G DA R + +L+ Q +E R LT+D + H+
Sbjct: 5 PRFLCDEMLGQLCRYLRAAGYDALLARDGASDA-QLLRQCREEGRHFLTQDTLIREHK-- 61
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ V L + L +I D L T+C + + A +AA
Sbjct: 62 ---AAHGVALALPHADLDRLIALLDEHYPLDWLSHAFTRC---LLDNTILV--AADAAAS 113
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
+R+P +QC C ++YW G+ Y +K
Sbjct: 114 -RRVPADALRPGEPLYQCPACGRIYWRGSHYKRMREKL 150
>gi|221506253|gb|EEE31888.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii VEG]
Length = 1353
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+L + +P ILK+ D+I+L F + N
Sbjct: 526 VLNTITANPKILKIFHGADSDIIWLQRDFS-----------------VYVVNMFDTCVAA 568
Query: 155 RKLP-KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLAN+ + + +K+ Q +DW RPLT E + YA D H L IF++ +
Sbjct: 569 RALAVPGGASLANLLQTYCHVEANKQYQLADWRRRPLTPEMETYARSDTHYLPFIFDVMK 628
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDI 262
++ K +++S ++ D G LE + G + + F + + D+
Sbjct: 629 NQLLSKPELGAALSPSAVTDFD----GTLEVTEAGKQIMMFTMERSRDV 673
>gi|121711303|ref|XP_001273267.1| 3'-5' exonuclease/helicase (Wrn), putative [Aspergillus clavatus
NRRL 1]
gi|119401418|gb|EAW11841.1| 3'-5' exonuclease/helicase (Wrn), putative [Aspergillus clavatus
NRRL 1]
Length = 391
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H S E E +A+ ++G D EWKPQ + + VSL+Q+A
Sbjct: 121 KDIIVHYCKSLEKSE--EVAKYFLNDKVIGFDMEWKPQATKSAGIRSNVSLIQIA----- 173
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
S+ + L + + L+++ SP+I+K+G K D L
Sbjct: 174 ----NSERIALFQIALFKPAKKAEDFVAASLRKILESPEIMKVGVTIKADCTRLRKY--- 226
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKL-PKETKSLANICKELLDISLSKE--LQC 182
+G D L+++ +Y + + + KL K SL++ +E + L K+ ++C
Sbjct: 227 ----LGID-TRGTLELSHLYKLVKYSESNPKLINKRPVSLSDQVEEHFGMPLEKDGNVRC 281
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
S+W+ L Q YAA D + +F+ K
Sbjct: 282 SNWAT-ALNYRQVQYAATDPYACFRLFDTMNTK 313
>gi|118464928|ref|YP_883693.1| hypothetical protein MAV_4563 [Mycobacterium avium 104]
gi|118166215|gb|ABK67112.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 251
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+F+ DV + LA LR G D S + + L ++++ R+LLTRD LL+ + +
Sbjct: 100 PRFVIDVNLGRLAWLLRLFGFDVWW--SNDADDQTLAAISAEQHRILLTRDRGLLKRRAV 157
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
R +Q L VI L +SRC +CNG T AV +
Sbjct: 158 THGLFVRPDD--PEEQALGVIRRLDLT-GRLAPLSRCVRCNG--------TLTAVAKDEV 206
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P F +C C ++YW G+ +
Sbjct: 207 SDQLPPLTRRYYDDFSRCTRCGRIYWPGSHH 237
>gi|221485391|gb|EEE23672.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii GT1]
Length = 1353
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+L + +P ILK+ D+I+L F + N
Sbjct: 526 VLNTITANPKILKIFHGADSDIIWLQRDFS-----------------VYVVNMFDTCVAA 568
Query: 155 RKLP-KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLAN+ + + +K+ Q +DW RPLT E + YA D H L IF++ +
Sbjct: 569 RALAVPGGASLANLLQTYCHVEANKQYQLADWRRRPLTPEMETYARSDTHYLPFIFDVMK 628
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDI 262
++ K +++S ++ D G LE + G + + F + + D+
Sbjct: 629 NQLLSKPELGAALSPSAVTDFD----GTLEVTEAGKQIMMFTMERSRDV 673
>gi|237835553|ref|XP_002367074.1| exosome component 10, putative [Toxoplasma gondii ME49]
gi|211964738|gb|EEA99933.1| exosome component 10, putative [Toxoplasma gondii ME49]
Length = 1353
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 26/171 (15%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIY--NHLHHKQ 152
+L + +P ILK+ D+I+L F S+Y N
Sbjct: 526 VLNTITANPKILKIFHGADSDIIWLQRDF-------------------SVYVVNMFDTCV 566
Query: 153 LGRKLP-KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
R L SLAN+ + + +K+ Q +DW RPLT E + YA D H L IF++
Sbjct: 567 AARALAVPGGASLANLLQTYCHVEANKQYQLADWRRRPLTPEMETYARSDTHYLPFIFDV 626
Query: 212 FQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDI 262
+ ++ K +++S ++ D G LE + G + + F + + D+
Sbjct: 627 MKNQLLSKPELGAALSPSAVTDFD----GTLEVTEAGKQIMMFTMERSRDV 673
>gi|206558599|ref|YP_002229359.1| hypothetical protein BCAL0193a [Burkholderia cenocepacia J2315]
gi|444373920|ref|ZP_21173231.1| hypothetical protein BURCENK562V_2434 [Burkholderia cenocepacia
K56-2Valvano]
gi|198034636|emb|CAR50503.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|443590943|gb|ELT59880.1| hypothetical protein BURCENK562V_2434 [Burkholderia cenocepacia
K56-2Valvano]
Length = 256
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 343 GPPP--WDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEK 400
GPPP W +F+ D + GLA+ LR G D + + EL +E
Sbjct: 87 GPPPAAW----------RFVADAHLGGLAQLLRLAGFDTCYDNHYRDD--ELAALAEREN 134
Query: 401 RVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRF 460
R++LTRD +LL+ + +++ + QL E+ E L + C +CN
Sbjct: 135 RIVLTRDRELLKRRAVVRGCYLHAQR--PADQLHELFERLDLA-PHMRPFRLCLRCNA-- 189
Query: 461 IQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
PL ++AA R+P + ++ +F C C +++WEG+ +
Sbjct: 190 ---PLHP---LDAAAAAPRVPAGVRLRHRRFAACDVCRRVFWEGSHW 230
>gi|363750290|ref|XP_003645362.1| hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888996|gb|AET38545.1| Hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
Length = 747
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 19/128 (14%)
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
+ +I L ++L E+F P ILK+ D+I+L D+G L + S
Sbjct: 267 VDTIALRQDLQVLNEIFTDPSILKVFHGAFMDIIWLQR-------DLG-------LYVVS 312
Query: 144 IYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+++ H + LG PK SLA + + + SK+ Q +DW RPL++ K YA D
Sbjct: 313 LFDTYHASRALG--FPKH--SLAYLLETFANFKTSKKYQLADWRIRPLSKPMKTYARADT 368
Query: 203 HCLIEIFN 210
H L+ I++
Sbjct: 369 HFLLNIYD 376
>gi|300723126|ref|YP_003712424.1| ribonuclease D [Xenorhabdus nematophila ATCC 19061]
gi|297629641|emb|CBJ90244.1| RNase D, processes tRNA precursor [Xenorhabdus nematophila ATCC
19061]
Length = 379
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 36/196 (18%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+ LD E+ R++ +P++ L+QL D S++ L++S W+
Sbjct: 28 IALDTEFVRTRTY---YPQLGLIQL-----------FDGEQLSLIDPLEISQ------WQ 67
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
LK L V PD+LKL +DL ++F P +D + + H
Sbjct: 68 PLKALLVDPDVLKLIHAGSEDLEVFGNSFQCLPT--------PMIDTQVLAAFIGHPI-- 117
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
+ A + E L + L K +DW RPL+ +Q YAA D + L+ + +I
Sbjct: 118 ------SCGFATLVAEYLHVELDKSESRTDWLARPLSRKQCEYAAADVYYLLPLADILLK 171
Query: 215 KVAQKGNSCSSISELD 230
K Q G ++ E D
Sbjct: 172 KTEQAGYFDAAKDESD 187
>gi|115450833|ref|NP_001049017.1| Os03g0157800 [Oryza sativa Japonica Group]
gi|108706273|gb|ABF94068.1| 3'-5' exonuclease family protein, expressed [Oryza sativa Japonica
Group]
gi|113547488|dbj|BAF10931.1| Os03g0157800 [Oryza sativa Japonica Group]
gi|215695202|dbj|BAG90393.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624215|gb|EEE58347.1| hypothetical protein OsJ_09469 [Oryza sativa Japonica Group]
Length = 600
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
LKE F P K+ +D+++L F C++ FD Q R
Sbjct: 210 LKEHFKDPTKRKVMHGADRDIMWLQRDFHIYVCNL-FDT----------------GQASR 252
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ + ++ +KE Q +DW +RPL++E YA D H L+ ++++ +++
Sbjct: 253 VLQMERNSLEHLLRHFCGVTANKEYQNADWRSRPLSDEMIKYAREDTHYLLYMYDLMRLR 312
Query: 216 VAQKGNSCSSI 226
+ ++ S + +
Sbjct: 313 LQKESTSDNDL 323
>gi|424852269|ref|ZP_18276666.1| ribonuclease III [Rhodococcus opacus PD630]
gi|356666934|gb|EHI47005.1| ribonuclease III [Rhodococcus opacus PD630]
Length = 429
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+ N+
Sbjct: 136 GRLAGFERVGLAAIVERTLGLELRKGHGAADWSKRPLPDSWLNYAALDVEVLVELRNVMA 195
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++ ++G S + E + L
Sbjct: 196 AELDEQGKSGWAAQEFEHIRL 216
>gi|308501811|ref|XP_003113090.1| hypothetical protein CRE_25297 [Caenorhabditis remanei]
gi|308265391|gb|EFP09344.1| hypothetical protein CRE_25297 [Caenorhabditis remanei]
Length = 793
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 26/196 (13%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD---L 84
+ + + +G D+E+KP S+ R++ +QL FN + VFL+D L
Sbjct: 443 TVEEGTYIGYDSEFKPGHLTDSSISRMATIQLF------FNEK--------VFLVDCVIL 488
Query: 85 SSIPLP-SIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL--- 139
I + +W+ + LF S + +GF K D+ L + + D + V+ ++
Sbjct: 489 EKIDISEGMWKKFFESLFHSKKLTVIGFDMKNDMEALFTVRPIRD-DFRQEDVKNFICVK 547
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
I N L L K++ L + +ELL++++ K Q +W RPL + Q YA+
Sbjct: 548 RFVEILNEYDASILS--LTKKSCRLITLVEELLNLTMDKTEQTGNWQCRPLRKNQIVYAS 605
Query: 200 IDAHCLIEIF-NIFQV 214
+DA ++++F IF++
Sbjct: 606 LDAVIVLDLFRKIFEI 621
>gi|212715679|ref|ZP_03323807.1| hypothetical protein BIFCAT_00579 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661046|gb|EEB21621.1| hypothetical protein BIFCAT_00579 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 431
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ I + ++ ++G
Sbjct: 132 GLAAVTEHYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETIMRAELRRQGKI 191
Query: 223 CSSISELD 230
+ E D
Sbjct: 192 EWAEEEFD 199
>gi|156101427|ref|XP_001616407.1| 3'-5' exonuclease domain containing protein [Plasmodium vivax
Sal-1]
gi|148805281|gb|EDL46680.1| 3'-5' exonuclease domain containing protein [Plasmodium vivax]
Length = 752
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 162 KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
KSL+++C++ L +L+K+LQ S+WS RPL E Q +YAA DA+ LI
Sbjct: 670 KSLSHLCQKFLGKNLNKQLQLSNWSRRPLMESQIHYAATDAYVLI 714
>gi|398869197|ref|ZP_10624579.1| hypothetical protein PMI35_06544 [Pseudomonas sp. GM78]
gi|398231182|gb|EJN17177.1| hypothetical protein PMI35_06544 [Pseudomonas sp. GM78]
Length = 246
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + + + R++LTRD +LL+ + +I
Sbjct: 97 RFVADAHLGGLASLLRMSGFD--TLYDNTFEDGEIAEIAATQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL E+ E L S + S C CN PL E + E A+
Sbjct: 154 SHGCY-VHALKPSLQLREIYERLDLARSA-RPFSLCLHCN-----LPLH-EISAELAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P + F +C C ++YWEG+ +
Sbjct: 204 LQVPPRVGALYSHFLRCDGCQRIYWEGSHW 233
>gi|333029171|ref|ZP_08457232.1| 3'-5' exonuclease [Bacteroides coprosuis DSM 18011]
gi|332739768|gb|EGJ70250.1| 3'-5' exonuclease [Bacteroides coprosuis DSM 18011]
Length = 211
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 42/196 (21%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L+ +++G+D+E +P ++ +V+LLQ+ S ++ FL L+ +
Sbjct: 40 LNAQTILGIDSETRPAFVKGKSY-KVALLQI--------------STDNICFLFRLNKLG 84
Query: 89 L-PSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQGCDIGFDRVEPYLDITSIY 145
L P + ELL+ +P+I K+G + D + L ++F + C +D+
Sbjct: 85 LVPELIELLE----NPNIKKIGLSLRDDFMMLRKRASFKQENC----------IDLQEYV 130
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
H K KSL I L +SK + S+W LT+ Q+ YAA DA
Sbjct: 131 KHFGIKD---------KSLQKIYAILFKEKISKAQRLSNWEAVELTDAQQRYAATDAWSC 181
Query: 206 IEIFNIFQVKVAQKGN 221
+ I+N + ++ Q G+
Sbjct: 182 LRIYNFLE-ELKQSGD 196
>gi|218192123|gb|EEC74550.1| hypothetical protein OsI_10088 [Oryza sativa Indica Group]
Length = 599
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
LKE F P K+ +D+++L F C++ FD Q R
Sbjct: 209 LKEHFKDPTKRKVMHGADRDIMWLQRDFHIYVCNL-FDT----------------GQASR 251
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ + ++ +KE Q +DW +RPL++E YA D H L+ ++++ +++
Sbjct: 252 VLQMERNSLEHLLRHFCGVTANKEYQNADWRSRPLSDEMIKYAREDTHYLLYMYDLMRLR 311
Query: 216 VAQKGNSCSSI 226
+ ++ S + +
Sbjct: 312 LQKESTSDNDL 322
>gi|167571605|ref|ZP_02364479.1| hypothetical protein BoklC_17308 [Burkholderia oklahomensis C6786]
Length = 251
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQ-TSKEKRVLLTRDAKLLRHQYL 416
+F+ D + LA+ LR G D P +LI+ ++E R++LTRD +LL+ +
Sbjct: 97 RFIADAHLGRLAQLLRLAGFDTL---YDNHYPDDLIEAIAAREARIVLTRDRELLKRR-T 152
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
I + Y V++L QL E+ + L + C CN PL ++ A+
Sbjct: 153 ITHGCY-VRALKPQAQLRELFDRLDLA-GNARPFRLCLSCNA-----PLRR---IDPAEA 202
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
R P + ++ +F C C +++WEG+ + ++ ID
Sbjct: 203 EGRAPQGVLQRHTRFVTCDVCRRVFWEGSHWRR-MRALID 241
>gi|435847861|ref|YP_007310111.1| hypothetical protein Natoc_2557 [Natronococcus occultus SP4]
gi|433674129|gb|AGB38321.1| hypothetical protein Natoc_2557 [Natronococcus occultus SP4]
Length = 154
Score = 52.8 bits (125), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 16/151 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQYL 416
K L DVM GL +LR G D + E + L+ E R LLTRD +L
Sbjct: 2 KLLLDVMCGGLVAYLRMCGHDTVYAGDRDIEADDALLAVAEDEARTLLTRDVQLATR--- 58
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ ++S QL+E + + +K+ + + S C +CNG L T A
Sbjct: 59 -ADDAILLESREVEAQLVE-LASVGVKLVLEDVPSYCGRCNGPLEDVELETSTPEYAPDP 116
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+R W+C DC Q +W G+ +
Sbjct: 117 AER----------AVWRCRDCGQYFWRGSHW 137
>gi|72162300|ref|YP_289957.1| HRDC:3'-5' exonuclease [Thermobifida fusca YX]
gi|71916032|gb|AAZ55934.1| HRDC:3'-5' exonuclease [Thermobifida fusca YX]
Length = 420
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 147 HLHHKQL------GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
HL ++L GR L + L + + +L + L+KE DWS RPL E+ YAA+
Sbjct: 124 HLRPRRLFDTELAGRLLGYQRVGLGAMVERVLGVRLAKEHAAVDWSTRPLPEDWLRYAAL 183
Query: 201 DAHCLIEIFNIFQVKVAQKGN 221
D LIE+ + + ++A+ G
Sbjct: 184 DVEVLIELRDALEAELAETGK 204
>gi|448116900|ref|XP_004203126.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
gi|359383994|emb|CCE78698.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
Length = 757
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 37/211 (17%)
Query: 7 KPLKIHLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGP 65
KP K T +S E + L S+ + +D E RS+ + V L+Q+
Sbjct: 220 KPWKETSATWVDSKEGLLSMVNELKNSTEIAVDLEHHDYRSY---YGLVCLMQI------ 270
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
SN +L+D ++ L E++ E+F +P ILK+ D+I+L
Sbjct: 271 --------SNRQNDWLVD--TLALRDDLEVMNEIFTNPQILKVFHGAFMDIIWLQR---- 316
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
D+G L I S+++ H +KL SLA + + SK+ Q +DW
Sbjct: 317 ---DLG-------LYIVSLFDTYH---AAKKLGLSKFSLAYLLETFAKFKTSKKYQLADW 363
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
RPL+ K YA D H L+ I++ + K+
Sbjct: 364 RLRPLSPAMKAYARSDTHFLLYIYDQMRNKL 394
>gi|320159696|ref|YP_004172920.1| putative ribonuclease D [Anaerolinea thermophila UNI-1]
gi|319993549|dbj|BAJ62320.1| putative ribonuclease D [Anaerolinea thermophila UNI-1]
Length = 380
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 21/136 (15%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG- 154
L E+F +P I K+ + D++ L D GF + HL +
Sbjct: 72 LNEIFSNPGIEKVFHAAEYDILCLKR-------DFGF-----------TFTHLFDTMIAA 113
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L + LA + +E ++L K Q ++W+ RPL NYA +D H LI++ N
Sbjct: 114 RILGRSEVGLAALLEEHFGVTLDKRYQRANWARRPLPPAMLNYARLDTHYLIDLRNHLAK 173
Query: 215 KVAQKGNSCSSISELD 230
++A++G ++++E D
Sbjct: 174 ELAERG--LTALAEED 187
>gi|189194651|ref|XP_001933664.1| exosome complex exonuclease Rrp [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979228|gb|EDU45854.1| exosome complex exonuclease Rrp [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 786
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F P ILK+ D+++L D+G L I +++ H
Sbjct: 268 ECLNEVFADPSILKVLHGAFMDIVWLQR-------DLG-------LYIVGLFDTFH---A 310
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L + SLA + + ++ K+ Q +DW RPL++E YA D H L+ IF+ +
Sbjct: 311 ARALGYQAASLAYLLELHVNFKAQKQYQLADWRQRPLSKELFEYARADTHFLLYIFDNMR 370
Query: 214 VKVAQKGN 221
++ K +
Sbjct: 371 NELVNKSD 378
>gi|167564456|ref|ZP_02357372.1| hypothetical protein BoklE_18006 [Burkholderia oklahomensis EO147]
Length = 251
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQ-TSKEKRVLLTRDAKLLRHQYL 416
+F+ D + LA+ LR G D P +LI+ ++E R++LTRD +LL+ +
Sbjct: 97 RFIADAHLGRLAQLLRLAGFDTL---YDNHYPDDLIEALAAREARIVLTRDRELLKRR-T 152
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
I + Y V++L QL E+ + L + C CN PL ++ A+
Sbjct: 153 ITHGCY-VRALKPQAQLRELFDRLDLA-GNARPFRLCLSCNA-----PLRR---IDPAEA 202
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
R P + ++ +F C C +++WEG+ + ++ ID
Sbjct: 203 EGRAPQGVLQRHTRFVTCDVCRRVFWEGSHWRR-MRALID 241
>gi|218199707|gb|EEC82134.1| hypothetical protein OsI_26176 [Oryza sativa Indica Group]
Length = 949
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 43/239 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
LAR L +D E Q S +S +L+Q++ Q +L+D
Sbjct: 157 LARLLDDEKAFAVDTE---QHSLRSFLGYTALMQISTQ--------------KADYLID- 198
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L + +L+ +F +P I K+ D+++L F ++ + ++
Sbjct: 199 -TIALHDVMSILRPVFANPSICKIFHGADNDVLWLQRDF--------------HIYVVNM 243
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
++ ++ L K KSLA + + ++ K +Q DW RPLT E YA DAH
Sbjct: 244 FDTAKACEV---LSKPQKSLAYLLELYCGVTTDKTMQREDWRLRPLTPEMIQYARCDAHY 300
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDII 263
L+ I N ++ K S DS N + E N + +K+C D++
Sbjct: 301 LLYIANCLASELHAKTYDAS-----DSPNDKINF--FFEASHRSNMDLVWKICAWRDLM 352
>gi|107024344|ref|YP_622671.1| hypothetical protein Bcen_2800 [Burkholderia cenocepacia AU 1054]
gi|116688330|ref|YP_833953.1| hypothetical protein Bcen2424_0306 [Burkholderia cenocepacia
HI2424]
gi|105894533|gb|ABF77698.1| protein of unknown function DUF82 [Burkholderia cenocepacia AU
1054]
gi|116646419|gb|ABK07060.1| protein of unknown function DUF82 [Burkholderia cenocepacia HI2424]
Length = 259
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 25/167 (14%)
Query: 343 GPPP--WDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEK 400
GPPP W +F+ D + GLA+ LR G D + + EL +E+
Sbjct: 87 GPPPAAW----------RFVADAHLGGLAQLLRLAGFDTCYDNHYRDD--ELAALAEREQ 134
Query: 401 RVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRF 460
R++LTRD +LL+ + +++ + +L QL E+ E L + C +CN
Sbjct: 135 RIVLTRDRELLKRRAVVRGCY--LHALQPADQLRELFERLDLA-PHMRPFRLCLRCNAPL 191
Query: 461 IQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
PL A + R+ ++ +F C C +++WEG+ +
Sbjct: 192 --HPLDAAAAAPSVPAGVRL------RHRRFAACDVCRRVFWEGSHW 230
>gi|94987515|ref|YP_595448.1| ribonuclease D [Lawsonia intracellularis PHE/MN1-00]
gi|442556368|ref|YP_007366193.1| 3'-5' exonuclease domain protein [Lawsonia intracellularis N343]
gi|94731764|emb|CAJ55127.1| Ribonuclease D [Lawsonia intracellularis PHE/MN1-00]
gi|441493815|gb|AGC50509.1| 3'-5' exonuclease domain protein [Lawsonia intracellularis N343]
Length = 198
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 39/206 (18%)
Query: 4 TYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
TY+ +K V TE+ E L +++G D E +P ++P +L+QLA
Sbjct: 24 TYKGNIK---VVQTEN-ELRDALDLLKDETVLGFDTEARPSFKKGKSYP-TALVQLA--- 75
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
++ V L+ LS +PL ELL + I+K G +D+ L
Sbjct: 76 -----------SSQHVILIRLSKVPLG---ELLVNILSCAKIIKAGVAIHEDIRLLQKLH 121
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCS 183
+ E +DI ++ R+L + + L + +L +SK +QCS
Sbjct: 122 PFEA--------EGIIDIA---------EMARRLQLKAQGLRTLAANILGCRVSKAVQCS 164
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIF 209
+W + L+ +Q YAA DA E++
Sbjct: 165 NWEKKELSPQQVLYAATDAWVGRELY 190
>gi|367017047|ref|XP_003683022.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
gi|359750685|emb|CCE93811.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
Length = 735
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 21/150 (14%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L+D +I L ++L E+F +P ILK+ D+I+L D+G L
Sbjct: 261 YLID--TIALRDDLQILNEVFANPKILKVFHGAFMDIIWLQR-------DLG-------L 304
Query: 140 DITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
+ S+++ H + +G LP+ SLA + ++ + SK+ Q +DW RPL++ YA
Sbjct: 305 YVVSLFDTFHASRAIG--LPRH--SLAYLLEKFANFKTSKKYQLADWRLRPLSKAMNAYA 360
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
D H L+ I++ + + ++ ++E
Sbjct: 361 RADTHFLLNIYDQLRNTLIEQNKLAGVLAE 390
>gi|340380967|ref|XP_003388993.1| PREDICTED: exosome component 10-like [Amphimedon queenslandica]
Length = 724
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
LL E+F +P+I+K+ D+ +L F I N Q
Sbjct: 294 LLNEVFTNPNIIKVMHGADWDIPWLQRDFG-----------------VYIVNLFDTGQAC 336
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L SLA + ++ +K+ Q +DW RPL E+ YA D H L+ +++ +
Sbjct: 337 RTLGLPRYSLAFLLSYCCGVTANKQYQLADWRIRPLPEDMIKYAREDTHYLLYVYDRLRN 396
Query: 215 KVAQKGNSCSS-ISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALD 261
++ ++ NS S+ I+ + ++ ++ LK + +KP I +++ KLC+ +
Sbjct: 397 ELIRRSNSQSNLINAVLKNSKEISLK-VYKKPAINDESY-LKLCKKFN 442
>gi|342319925|gb|EGU11870.1| Hypothetical Protein RTG_02115 [Rhodotorula glutinis ATCC 204091]
Length = 966
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E F +P+ +K+ K D+++L F L I +++ H +
Sbjct: 342 ESLNEFFTNPEWIKVLHGAKSDIVWLQRDFG--------------LYIVGLFDTYHATHV 387
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L SLA++ D K Q +DW RPL +E YA D H L+ I++ +
Sbjct: 388 ---LGYAQHSLASLLDMYTDFEPDKRYQLADWRIRPLPKEMLQYARSDTHYLLSIYDHLR 444
Query: 214 VKVAQKGNSC 223
+ + KG +
Sbjct: 445 LALHAKGAAS 454
>gi|196007028|ref|XP_002113380.1| hypothetical protein TRIADDRAFT_27020 [Trichoplax adhaerens]
gi|190583784|gb|EDV23854.1| hypothetical protein TRIADDRAFT_27020, partial [Trichoplax
adhaerens]
Length = 535
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 96/238 (40%), Gaps = 43/238 (18%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TE E L L + +D E RS+Q V L+Q++ +
Sbjct: 243 TEKDELKDLLETLKSVTEFAVDLEHHSYRSYQG---FVCLMQISTRDA-----------D 288
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
+V L L S +W L E+F P I+K+ D+I+L F
Sbjct: 289 YIVDTLALRS----ELWTL-NEVFSDPKIIKILHGADSDIIWLQRDFA------------ 331
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ N Q R L SL+ + + +++ +K LQ +DW RPL +E
Sbjct: 332 -----IYVVNMFDTGQAARLLQFPRFSLSYLLLKYCNVTANKGLQLADWRIRPLPQEMVQ 386
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGIL---EKPDIGNKT 251
YA D H L+ IF++ ++ N+ +S+ +L SN D K L EKP K+
Sbjct: 387 YAREDTHYLLYIFDVLTNELM---NASTSV-DLLKSNFDRSKKICLRTYEKPVFNKKS 440
>gi|423348957|ref|ZP_17326613.1| hypothetical protein HMPREF9156_00151 [Scardovia wiggsiae F0424]
gi|393703186|gb|EJD65387.1| hypothetical protein HMPREF9156_00151 [Scardovia wiggsiae F0424]
Length = 432
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
Y ++ R L + LA + + L ++L+KE +DWS RPL + +NYAA+D
Sbjct: 117 YRLFDTERAARLLGQAHFGLAAVTERYLGVTLAKEHSAADWSYRPLGRDMRNYAALDVEV 176
Query: 205 LIEIFNIFQVKVAQKGNS 222
LIE+ + + + G S
Sbjct: 177 LIELKKLMAADLRKAGKS 194
>gi|301091688|ref|XP_002896023.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095658|gb|EEY53710.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 575
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 88/227 (38%), Gaps = 67/227 (29%)
Query: 35 VGLDAEWKPQR---SHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
+G D+EWK S + + +LLQLA + VV L++ +I LP
Sbjct: 347 IGFDSEWKAVHEVASSEGTAAKCALLQLASREKAFV--------VDVVALIEHGNILLP- 397
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
LF S ++KLGF + D+ L S G + + +D+ ++ L
Sbjct: 398 -------LFQSESVIKLGFDTRGDVKALRSFLT--GNYTAENVMSMLVDLQAVTRKLP-T 447
Query: 152 QLGRKLP------------------------------KETKS---------------LAN 166
Q G K+ K T+S LA
Sbjct: 448 QKGTKVEVKGGDGSSSNANTLVANSEATGTETRSRKWKHTRSKASENDASANSSRLGLAA 507
Query: 167 ICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
I L + L K + S+W RPLT+ Q +YAA+DAH L++I+ Q
Sbjct: 508 IAATYLGLPLDKRARMSNWERRPLTQAQLHYAALDAHVLVQIYYKMQ 554
>gi|297560960|ref|YP_003679934.1| hypothetical protein Ndas_2002 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296845408|gb|ADH67428.1| protein of unknown function DUF82 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 241
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P+FL DV + LA+ LR +G+D A + +P L Q + E RVLLTRD LL L
Sbjct: 85 PRFLLDVHLGTLARRLRLLGLDTAYDNDRD-DP-SLFRQANAEDRVLLTRDRGLLSRSGL 142
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
V+ L QL EV+E F + + +RC CNG + + EE E +
Sbjct: 143 RAGGY--VREQLPAGQLREVLERFAPPL---RPWTRCPACNGALVHA--AKEEVREDLEA 195
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKL 520
R +D F +C C ++YW G + Q + KL
Sbjct: 196 GTR---ATYDV---FARCSGCERVYWPGAHHSRLAQIVREAQKL 233
>gi|222637126|gb|EEE67258.1| hypothetical protein OsJ_24424 [Oryza sativa Japonica Group]
Length = 949
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 43/239 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
LAR L +D E Q S +S +L+Q++ Q +L+D
Sbjct: 157 LARLLDDEKAFAVDTE---QHSLRSFLGYTALMQISTQ--------------KADYLID- 198
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L + +L+ +F +P I K+ D+++L F ++ + ++
Sbjct: 199 -TIALHDVMSILRPVFANPSICKIFHGADNDVLWLQRDF--------------HIYVVNM 243
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
++ ++ L K KSLA + + ++ K +Q DW RPLT E YA DAH
Sbjct: 244 FDTAKACEV---LSKPQKSLAYLLELYCGVTTDKTMQREDWRLRPLTPEMIQYARCDAHY 300
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDII 263
L+ I N ++ K S DS N + E N + +K+C D++
Sbjct: 301 LLYIANCLASELHAKTYDAS-----DSPNDKINF--FFEASHRSNMDLVWKICAWRDLM 352
>gi|111226700|ref|XP_642107.2| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970724|gb|EAL68469.2| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
Length = 686
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 56/197 (28%)
Query: 34 LVGLDAEW-------------KPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
++G DAEW K ++H ++ +V+L+QL S+ + F
Sbjct: 163 IIGFDAEWGNPNSIFDDKIDDKTTKTHYNH--KVALIQL--------------SSKNETF 206
Query: 81 LLDLSS---IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
L+ +S IP+ L+++ P ++K+G QD + TF +
Sbjct: 207 LIQVSQMEKIPIS-----LEQILTDPRLIKVGVAVSQDAATIFQTFSV--------VTKG 253
Query: 138 YLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQK 195
Y+D+ I R E LA++ +++++L+K +++C W N+ L+ +Q
Sbjct: 254 YVDLVPI---------ARLTNYEGNGLASLALNVMNVTLNKSNKIRCGHWENKKLSNDQI 304
Query: 196 NYAAIDAHCLIEIFNIF 212
+YAA DA EIF I
Sbjct: 305 HYAAADAWVGREIFEIM 321
>gi|421868608|ref|ZP_16300254.1| hypothetical protein I35_5023 [Burkholderia cenocepacia H111]
gi|358071391|emb|CCE51132.1| hypothetical protein I35_5023 [Burkholderia cenocepacia H111]
Length = 256
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 343 GPPP--WDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEK 400
GPPP W +F+ D + GLA+ LR G D + + EL +E
Sbjct: 87 GPPPAAW----------RFVADAHLGGLAQLLRLAGFDTCYDNHYRDD--ELAALAEREN 134
Query: 401 RVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRF 460
R++LTRD +LL+ + +++ + QL E+ E L + C +CN
Sbjct: 135 RIVLTRDRELLKRRAVVRGCYLHAQR--PADQLHELFERLDLA-PHMRPFRLCLRCNA-- 189
Query: 461 IQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
PL ++AA R+P + ++ +F C C +++WEG+ +
Sbjct: 190 ---PLHP---LDAAAAALRVPAGVRLRHRRFAACDVCRRVFWEGSHW 230
>gi|319901369|ref|YP_004161097.1| 3'-5' exonuclease [Bacteroides helcogenes P 36-108]
gi|319416400|gb|ADV43511.1| 3'-5' exonuclease [Bacteroides helcogenes P 36-108]
Length = 220
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 43/209 (20%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQS-SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPR 66
P +IH+V ++P A A +S +L+G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVV---QTPWEAEKAVAYLKSCTLLGIDSETRPSFTKGQSH-KVALLQVSSE---- 72
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFC 124
+F L+L+ + LP I L +P++ K+G + D + L + F
Sbjct: 73 --------EHCFLFRLNLTGLTLPVI-----TLLENPNVTKVGLSLRDDFMMLHKRAPFE 119
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
C + ++ R + KSL I L +SK + S+
Sbjct: 120 QHAC-------------------IELQEYVRAFGIQDKSLQKIYGILFGEKISKSQRLSN 160
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
W L+E QK YAA DA + I+N Q
Sbjct: 161 WEADMLSESQKQYAATDAWACLNIYNRLQ 189
>gi|317480691|ref|ZP_07939778.1| 3'-5' exonuclease [Bacteroides sp. 4_1_36]
gi|316903198|gb|EFV25065.1| 3'-5' exonuclease [Bacteroides sp. 4_1_36]
Length = 207
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L L+G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPWEAE--KAVAYLKSCPLLGIDSETRPSFT-KGQIHKVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPVI-----TLLENPSVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
C + ++ R + KSL I L +SK + S+W
Sbjct: 121 HAC-------------------IELQEYVRAFGIQDKSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAETLTEPQKLYAATDAWACLNIYNRLQ 189
>gi|160889123|ref|ZP_02070126.1| hypothetical protein BACUNI_01544 [Bacteroides uniformis ATCC 8492]
gi|270296116|ref|ZP_06202316.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|156861130|gb|EDO54561.1| 3'-5' exonuclease [Bacteroides uniformis ATCC 8492]
gi|270273520|gb|EFA19382.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 207
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L L+G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPWEAE--KAVAYLKSCPLLGIDSETRPSFT-KGQIHKVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPVI-----TLLENPSVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
C + ++ R + KSL I L +SK + S+W
Sbjct: 121 HAC-------------------IELQEYVRAFGIQDKSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAETLTEPQKLYAATDAWACLNIYNKLQ 189
>gi|398870068|ref|ZP_10625421.1| hypothetical protein PMI34_00590 [Pseudomonas sp. GM74]
gi|398209817|gb|EJM96483.1| hypothetical protein PMI34_00590 [Pseudomonas sp. GM74]
Length = 246
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + +++ R++LTRD +LL+ + +I
Sbjct: 97 RFVADAHLGGLASLLRMSGFD--TLYDNGFEDGEIAEIAAQQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL E+ E L S + S C CN PL E ++E A+
Sbjct: 154 SHGCY-VHALKPSLQLRELYERLDLARSA-RPFSLCLHCN-----LPLH-EISLELAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P + F +C C ++YWEG+ +
Sbjct: 204 TQVPPRIGALYSHFLRCDACQRVYWEGSHW 233
>gi|297739148|emb|CBI28799.3| unnamed protein product [Vitis vinifera]
Length = 935
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 38/205 (18%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ LA LS+ + +D E Q S +S +L+Q++ Q N + +
Sbjct: 121 QLKELADVLSKQRVFAVDTE---QHSLRSFLGFTALIQISTQ-----NED---------Y 163
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L ++L+ +F +P I K+ D+++L F ++
Sbjct: 164 LVD--TIALHDTLDVLQPVFANPSICKVFHGADNDVLWLQRDF--------------HIY 207
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ ++++ ++ L K KSLA + + ++ +K LQ DW RPL+ E YA
Sbjct: 208 VVNLFDTAKACEV---LSKPQKSLAYLLETYCGVATNKLLQREDWRQRPLSVEMLEYAQT 264
Query: 201 DAHCLIEIFN--IFQVKVAQKGNSC 223
DAH L+ I N I +++ NSC
Sbjct: 265 DAHYLLYIANCLIAELRQHDSENSC 289
>gi|297826687|ref|XP_002881226.1| hypothetical protein ARALYDRAFT_320982 [Arabidopsis lyrata subsp.
lyrata]
gi|297327065|gb|EFH57485.1| hypothetical protein ARALYDRAFT_320982 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 43/227 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
LA L++ + +D E Q S +S +L+Q++ E D FL+D
Sbjct: 130 LAEILAKEKVFAVDTE---QHSLRSFLGFTALIQISTH-------EKD-------FLVD- 171
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L +L+ +F P+I K+ D+++L F ++ + ++
Sbjct: 172 -TIVLHDAMSILRPVFSEPNICKVFHGADNDVLWLQRDF--------------HIYVVNM 216
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
++ ++ L K +SLA + + + ++ +K LQ DW RPL+EE YA DAH
Sbjct: 217 FDTAKACEV---LSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYARTDAHY 273
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKT 251
L+ I + ++ Q ++ DSS+ D +LE N T
Sbjct: 274 LLYIADSLTAELKQ-------LATEDSSSPDDRFHFLLEASRRSNMT 313
>gi|389584428|dbj|GAB67160.1| 3'-5' exonuclease domain containing protein [Plasmodium cynomolgi
strain B]
Length = 734
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 162 KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
KSL+++C++ L +L+K+LQ S+WS RPL E Q +YAA DA+ LI
Sbjct: 652 KSLSHLCQKFLGKNLNKKLQLSNWSRRPLMESQIHYAATDAYVLI 696
>gi|423303634|ref|ZP_17281633.1| hypothetical protein HMPREF1072_00573 [Bacteroides uniformis
CL03T00C23]
gi|423307643|ref|ZP_17285633.1| hypothetical protein HMPREF1073_00383 [Bacteroides uniformis
CL03T12C37]
gi|392687998|gb|EIY81289.1| hypothetical protein HMPREF1072_00573 [Bacteroides uniformis
CL03T00C23]
gi|392689512|gb|EIY82789.1| hypothetical protein HMPREF1073_00383 [Bacteroides uniformis
CL03T12C37]
Length = 207
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L L+G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPWEAE--KAVAYLKSCPLLGIDSETRPSFT-KGQIHKVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPVI-----TLLENPSVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
C + ++ R + KSL I L +SK + S+W
Sbjct: 121 HAC-------------------IELQEYVRAFGIQDKSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAETLTEPQKLYAATDAWACLNIYNKLQ 189
>gi|310792006|gb|EFQ27533.1| 3'-5' exonuclease [Glomerella graminicola M1.001]
Length = 882
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 20/138 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+++L D+G V D LH+ Q
Sbjct: 284 QVLNEVFADPSIIKVFHGAFMDMVWLQR-------DLGL-YVNGLFDTGMACEVLHYPQ- 334
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
KSLA + K+ ++ K+ Q +DW RPL+EE YA D H L+ I++ +
Sbjct: 335 --------KSLAFLLKKFVNFDADKKYQLADWRVRPLSEEMLYYARSDTHYLLYIYDKMR 386
Query: 214 ---VKVAQKGNSCSSISE 228
V + +GN + E
Sbjct: 387 NELVMKSDRGNPSTDYIE 404
>gi|383114532|ref|ZP_09935294.1| hypothetical protein BSGG_1297 [Bacteroides sp. D2]
gi|313693762|gb|EFS30597.1| hypothetical protein BSGG_1297 [Bacteroides sp. D2]
Length = 219
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 44/217 (20%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSS-LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPR 66
P +I+++ S T A A QS ++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAE---TEKAVAYLQSRPVIGIDSETRPSFTKGQSH-KVALLQISSE---- 72
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFC 124
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 --------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFT 119
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
Q C + + R+ + KSL I L +SK + S+
Sbjct: 120 QQSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSN 160
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
W L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 161 WEADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|15920410|ref|NP_376079.1| hypothetical protein ST0230 [Sulfolobus tokodaii str. 7]
gi|15621192|dbj|BAB65188.1| hypothetical protein STK_02300 [Sulfolobus tokodaii str. 7]
Length = 154
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 31/161 (19%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL---LRHQ 414
KF+ D M+ LA+ LR +G D T S E +++ + KRV++TRD L R +
Sbjct: 5 KFIVDAMLGKLARWLRILGYD--TLYSNNYEDWKILKIAEETKRVIITRDRGLCIRARKK 62
Query: 415 YLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
L +Y + L+ L ++ + +++ ++ D SRCT+CNG
Sbjct: 63 NLECFLVYSSEDLI--DILAKLSKKYKIDLNADPNFSRCTECNG---------------- 104
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
++I D W+C C + YW+G+ + I
Sbjct: 105 -VLEKIDD-------NKWKCTKCGKEYWKGSHWRTIENTLI 137
>gi|448119348|ref|XP_004203709.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
gi|359384577|emb|CCE78112.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
Length = 756
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F +P ILK+ D+I+L D+G L I S+++ H
Sbjct: 289 EVLNEIFTNPQILKVFHGAFMDIIWLQR-------DLG-------LYIVSLFDTYH---A 331
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+KL SLA + + SK+ Q +DW RPL+ K YA D H L+ I++ +
Sbjct: 332 AKKLGLSKFSLAYLLESFAKFKTSKKYQLADWRLRPLSPAMKAYARSDTHFLLYIYDQMR 391
Query: 214 VKV 216
K+
Sbjct: 392 NKL 394
>gi|268325424|emb|CBH39012.1| conserved hypothetical protein, DUF82 family [uncultured archaeon]
Length = 179
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKK----PEPRELIDQTSKEKRVLLTRDAKLLRH 413
+F+ D M+ L+ LR +G D K E L E R+LLTRD L
Sbjct: 19 RFITDRMLGKLSTWLRILGYDTIYASEVKGDCVEEDESLAALAEHEARILLTRDKILAAS 78
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
Q +K+ + QL E++ + ++ + + RC+ CNGR + + EE +
Sbjct: 79 ATRKGAQCVHMKTGVVMGQLKELLRHYP-NLNLEPFLIRCSLCNGRL--RKVREEEEEDM 135
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
+ +P + + FW C C Q+YW+G+ + + ++
Sbjct: 136 LREKSYVPTSMIGE-CDFWICNCCGQIYWKGSHWRDMRERL 175
>gi|341877730|gb|EGT33665.1| hypothetical protein CAEBREN_26343 [Caenorhabditis brenneri]
Length = 790
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 37/196 (18%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL--- 84
+ + +G D+E+KP + R++++QL FN + FL+D
Sbjct: 442 TVEEGVFIGYDSEFKPFHLVDTLKSRMAIMQLF------FNKRA--------FLIDWVEL 487
Query: 85 --SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI- 141
+S+ + + + LF+S + +GF K D+ + F + D +P DI
Sbjct: 488 ENNSVDDKLVKKFFESLFMSKKLKVIGFDIKNDM---EALFTVRAIK---DDYKPE-DIK 540
Query: 142 --------TSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
I N L+ K L + K T +A + + L+ + K QC +W RPL +
Sbjct: 541 NAICVKRFADILNDLNPKILN--MEKRTSKMAVLVENLIGWKMDKSEQCGNWQARPLRKN 598
Query: 194 QKNYAAIDAHCLIEIF 209
Q YAA+DA ++E+F
Sbjct: 599 QIVYAALDAVAVVELF 614
>gi|396458114|ref|XP_003833670.1| hypothetical protein LEMA_P064310.1 [Leptosphaeria maculans JN3]
gi|312210218|emb|CBX90305.1| hypothetical protein LEMA_P064310.1 [Leptosphaeria maculans JN3]
Length = 799
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 99/239 (41%), Gaps = 50/239 (20%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
LKIH S + E +A+ ++G D EWKP S VSL+QLAC+
Sbjct: 227 LKIHYCKSKDVAE--RVAKRFLDQKVLGFDIEWKPFGIPSSIKQNVSLIQLACE------ 278
Query: 69 PESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSSTFC 124
+ L +S ++ EL LK + SPDI K+G K D L+
Sbjct: 279 --------DRIALFHISLFEGTAVEELMPPSLKAVLESPDIYKVGVAIKGDFSRLARYLG 330
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHH-----KQLGRKLPKETKSLANICKELLDISL--- 176
Q + +++ ++N + + KQ+ +L LA + L + L
Sbjct: 331 IQARGV--------FELSRLHNLVQYYEADPKQVNNRL----VGLAAQVHQHLQLPLYKG 378
Query: 177 ---------SKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSI 226
S ++ SDWS PL Q +YAA DA+ +++ + K AQ + S+I
Sbjct: 379 EPLDDDPETSSSVRESDWS-LPLGFSQIHYAAADAYAGFRLYDALERKRAQLKPTPSAI 436
>gi|160887119|ref|ZP_02068122.1| hypothetical protein BACOVA_05135 [Bacteroides ovatus ATCC 8483]
gi|293370879|ref|ZP_06617424.1| 3'-5' exonuclease [Bacteroides ovatus SD CMC 3f]
gi|299148614|ref|ZP_07041676.1| 3'-5' exonuclease domain protein [Bacteroides sp. 3_1_23]
gi|336414892|ref|ZP_08595235.1| hypothetical protein HMPREF1017_02343 [Bacteroides ovatus
3_8_47FAA]
gi|423288786|ref|ZP_17267637.1| hypothetical protein HMPREF1069_02680 [Bacteroides ovatus
CL02T12C04]
gi|423295051|ref|ZP_17273178.1| hypothetical protein HMPREF1070_01843 [Bacteroides ovatus
CL03T12C18]
gi|156107530|gb|EDO09275.1| 3'-5' exonuclease [Bacteroides ovatus ATCC 8483]
gi|292634095|gb|EFF52639.1| 3'-5' exonuclease [Bacteroides ovatus SD CMC 3f]
gi|298513375|gb|EFI37262.1| 3'-5' exonuclease domain protein [Bacteroides sp. 3_1_23]
gi|335941753|gb|EGN03604.1| hypothetical protein HMPREF1017_02343 [Bacteroides ovatus
3_8_47FAA]
gi|392669984|gb|EIY63470.1| hypothetical protein HMPREF1069_02680 [Bacteroides ovatus
CL02T12C04]
gi|392674074|gb|EIY67524.1| hypothetical protein HMPREF1070_01843 [Bacteroides ovatus
CL03T12C18]
Length = 219
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 44/217 (20%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSS-LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPR 66
P +I+++ S T A A QS ++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAE---TEKAVAYLQSRPVIGIDSETRPSFTKGQSH-KVALLQISSE---- 72
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFC 124
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 --------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFT 119
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
Q C + + R+ + KSL I L +SK + S+
Sbjct: 120 QQSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSN 160
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
W L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 161 WEADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|118348280|ref|XP_001007615.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89289382|gb|EAR87370.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 964
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
K++ + +S E L + ++S+ G+D E+ + + N V +Q+
Sbjct: 750 KLYFINQIDSDESRILKEEIEKNSIFGIDLEYYSENKDK-NLGFVCTIQI---------- 798
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
S ++ F++D ++ L K LF++ +K+ + D+ +L + F D
Sbjct: 799 ----STVNMDFMIDAMALRNQINQLLNKSLFLNKTKIKILHGCENDIKWLKNDF-----D 849
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
I DI ++++ + + + + +++ SL N+ ++ L + L K Q SDW RP
Sbjct: 850 I---------DIVNLFDTMFAEMIIKN-KQQSYSLKNLSQDYLGVELDKSYQISDWRIRP 899
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
L NYA +D+ L+ +F I + + K
Sbjct: 900 LPTPMMNYARVDSFILLRLFPIMKQMLTSKN 930
>gi|298252714|ref|ZP_06976508.1| ribonuclease D [Gardnerella vaginalis 5-1]
gi|297533078|gb|EFH71962.1| ribonuclease D [Gardnerella vaginalis 5-1]
Length = 476
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ +V++ ++G
Sbjct: 180 VMRVELKKQG 189
>gi|336320604|ref|YP_004600572.1| 3'-5' exonuclease [[Cellvibrio] gilvus ATCC 13127]
gi|336104185|gb|AEI12004.1| 3'-5' exonuclease [[Cellvibrio] gilvus ATCC 13127]
Length = 443
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L E LA + + L + L+KE DWS RPL E YAA+D L+E+ +
Sbjct: 158 ARLLGMERVGLAAVVADTLGLGLAKEHSAVDWSTRPLPAEWLRYAALDVEVLVEVRQVLA 217
Query: 214 VKVAQKGNSCSSISELDS 231
++A G + + E ++
Sbjct: 218 ERLAVAGKAQWAAQEFEA 235
>gi|426256366|ref|XP_004021811.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Ovis aries]
Length = 1446
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + RV+L+QL + S +L +
Sbjct: 67 ISMSLSDGDVVGFDIEWPPVYK-KGTLGRVALIQLCV-------------SESKCYLFHI 112
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
SS+ + + LK L + I K G +QD L F D+ +++ +++T +
Sbjct: 113 SSMLV--FPQGLKMLLENEAIKKAGVGIEQDQWKLLRDF-----DV---KLKSIVELTDV 162
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CS+WS PLTE+QK YAA D
Sbjct: 163 ANE--------KLKCIETWSLNGLVKYLFGKQLLKDRSVRCSNWSKFPLTEDQKVYAATD 214
Query: 202 AHCLIEIF 209
A+ I+
Sbjct: 215 AYAGFIIY 222
>gi|302916517|ref|XP_003052069.1| hypothetical protein NECHADRAFT_92603 [Nectria haematococca mpVI
77-13-4]
gi|256733008|gb|EEU46356.1| hypothetical protein NECHADRAFT_92603 [Nectria haematococca mpVI
77-13-4]
Length = 833
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F +P I+K+ D+++L D+G V D + LH+
Sbjct: 286 EVLNEVFTNPKIIKVFHGAYMDMVWLQR-------DLGL-YVNGLFDTFFACDQLHYP-- 335
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
KSLA + + +D K+ Q +DW RP+ EE YA D H L+ I++
Sbjct: 336 -------AKSLAFLLSKFVDFDADKQYQLADWRIRPIPEEMMYYARSDTHYLLYIYD 385
>gi|283783345|ref|YP_003374099.1| 3'-5' exonuclease [Gardnerella vaginalis 409-05]
gi|283441638|gb|ADB14104.1| 3'-5' exonuclease [Gardnerella vaginalis 409-05]
Length = 476
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ +V++ ++G
Sbjct: 180 VMRVELKKQG 189
>gi|426195548|gb|EKV45477.1| hypothetical protein AGABI2DRAFT_186278 [Agaricus bisporus var.
bisporus H97]
Length = 870
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D+ I L E+L E+F P I+K+ + D+++L F L
Sbjct: 312 FVVDV--IALRDEMEVLNEVFTDPKIVKVFHGAESDIVWLQQDFN--------------L 355
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ ++++ H +L + P+ LAN+ + D K Q +DW RPL +E YA
Sbjct: 356 YVVNLFDTYHASKL-LEFPRH--GLANLLEMYCDYIPDKRYQLADWRIRPLPKEMLEYAR 412
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEK 244
D H L+ I++ + + +G S + L + +L +
Sbjct: 413 SDTHFLLFIYDNLRNALLDRGGPASRSPHASKNPLHASINHVLTR 457
>gi|218439906|ref|YP_002378235.1| 3'-5' exonuclease [Cyanothece sp. PCC 7424]
gi|218172634|gb|ACK71367.1| 3'-5' exonuclease [Cyanothece sp. PCC 7424]
Length = 308
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
T+S + L L++ ++ LD E S +S R+SL+Q+ P +++N
Sbjct: 5 TQSEDIQALIDDLTEVKILWLDTESTDLNSKKS---RLSLIQVLAYP--------EDTNG 53
Query: 77 SVVFLLDLSSIPLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDR 134
S ++ D+ + P I + ++++ V+ I K+ + DL +L C + +
Sbjct: 54 SRTYIFDV--LDNPDIVDYFIEKIMVNDQINKIFHNAQHDLQFLGGKKAKNVTCTLKLSK 111
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDI-SLSKELQCSDWSNRPLTEE 193
PY H+ LP +L + + L D ++SKE Q SDWS RPL+++
Sbjct: 112 TIPY--------HI--------LPVPNHTLKTLTEYLTDFKNVSKEEQTSDWSQRPLSQK 155
Query: 194 QKNYAAIDAHCLIEI 208
Q +YA +D L I
Sbjct: 156 QLDYAKMDPVYLAHI 170
>gi|240278412|gb|EER41918.1| 3'-5' exonuclease/helicase [Ajellomyces capsulatus H143]
Length = 947
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 35/219 (15%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S Q + VS++QLA
Sbjct: 702 KEITVHYCTSLQTME--RVAKLFLSETIVGLDVEWKAQASAQDSLVDNVSVIQLA----- 754
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSS 121
S E A +F L L + P S+ L LK + SPDI+K+G + D
Sbjct: 755 -----SKERIA--IFHLALFN-PANSLQHLLSPTLKRILESPDIVKVGVAIRAD------ 800
Query: 122 TFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--E 179
C++ R +++ ++ + H + + K +LA +E L + L K E
Sbjct: 801 --CTRLYKFLGIRTNNICEVSRLHKVVKHHLNPKLIDKRLVNLAQQVEEHLGLPLDKDPE 858
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
++C WS + L Q Y + +++F++ + K Q
Sbjct: 859 IRCGGWSKK-LNYRQVQY----PYAALQLFHVLEAKRLQ 892
>gi|419967866|ref|ZP_14483740.1| ribonuclease D [Rhodococcus opacus M213]
gi|414566760|gb|EKT77579.1| ribonuclease D [Rhodococcus opacus M213]
Length = 429
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+ N+
Sbjct: 136 GRLAGFERVGLAAIVERTLGLELRKGHGAADWSKRPLPDSWLNYAALDVEVLVELRNVMA 195
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++ ++G S + E + L
Sbjct: 196 AELDEQGKSEWAAQEFEHIRL 216
>gi|356515280|ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max]
Length = 873
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 36/201 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L LS+ +D E Q S +S +L+Q++ + E D +L+D
Sbjct: 131 LVDVLSEERFFAVDTE---QHSLRSFLGFTALVQISTR-------EKD-------YLVD- 172
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L +L+ +F +P I K+ D+++L F ++ + ++
Sbjct: 173 -TIALHDFMGILRPIFANPSICKVFHGADNDIVWLQRDF--------------HIYVVNL 217
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
++ + L K KSLA + + ++ +K LQ DW RPL+ E +YA DAH
Sbjct: 218 FDT---SKACEVLSKPQKSLAYLLETYCGVTTNKLLQREDWRQRPLSAEMVHYARTDAHY 274
Query: 205 LIEIFNIFQVKVAQKGNSCSS 225
L+ I N ++ Q N SS
Sbjct: 275 LLYIANCLINELKQLDNENSS 295
>gi|384100730|ref|ZP_10001787.1| ribonuclease D [Rhodococcus imtechensis RKJ300]
gi|383841636|gb|EID80913.1| ribonuclease D [Rhodococcus imtechensis RKJ300]
Length = 429
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+ N+
Sbjct: 136 GRLAGFERVGLAAIVERTLGLELRKGHGAADWSKRPLPDSWLNYAALDVEVLVELRNVMA 195
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++ ++G S + E + L
Sbjct: 196 AELDEQGKSEWAAQEFEHIRL 216
>gi|396483292|ref|XP_003841672.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
gi|312218247|emb|CBX98193.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
Length = 783
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F +PDI+K+ D+++L D+G L + +++ H
Sbjct: 278 ECLNEVFANPDIIKVLHGAYMDIMWLQR-------DLG-------LYVVGLFDTYH---A 320
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLA + + K+ Q +DW RPL +E YA D H L+ IF+ +
Sbjct: 321 ARSLGYPGASLAYLLDRFIGFKAQKQYQIADWRIRPLGKELFEYARADTHFLLYIFDNMR 380
Query: 214 VKVAQKGN 221
++ +K +
Sbjct: 381 NELVEKSD 388
>gi|339479014|gb|ABE95475.1| Ribonuclease D [Bifidobacterium breve UCC2003]
Length = 433
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ N+ + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELENLMRRDLRAAG 193
>gi|291456557|ref|ZP_06595947.1| ribonuclease D [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291381834|gb|EFE89352.1| ribonuclease D [Bifidobacterium breve DSM 20213 = JCM 1192]
Length = 433
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ N+ + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELENLMRRDLRAAG 193
>gi|383823537|ref|ZP_09978727.1| 3'-5' exonuclease [Mycobacterium xenopi RIVM700367]
gi|383338816|gb|EID17175.1| 3'-5' exonuclease [Mycobacterium xenopi RIVM700367]
Length = 417
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL +SL+K +DWS RPL NYAA+D LIE+
Sbjct: 134 GRLAGFERVNLAAMVQRLLGLSLAKGHGAADWSKRPLPAAWLNYAALDVEVLIELREAIA 193
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E +
Sbjct: 194 AVLAEQGKTHWAAEEFE 210
>gi|417943263|ref|ZP_12586515.1| Ribonuclease D [Bifidobacterium breve CECT 7263]
gi|376165800|gb|EHS84740.1| Ribonuclease D [Bifidobacterium breve CECT 7263]
Length = 433
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ N+ + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELENLMRRDLRAAG 193
>gi|255569470|ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223535002|gb|EEF36685.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 857
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 21/145 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+I+L F C++ FD Q R
Sbjct: 294 LREVFKDPTKRKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------GQASR 336
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ + I+ +KE Q +DW RPLT+E Y D H L+ I+++ ++
Sbjct: 337 VLKLERNSLEHLLRHFCGITANKEYQNADWRLRPLTDEMLRYGREDTHYLLYIYDLMRIM 396
Query: 216 V----AQKGNSCSSISELDSSNLDL 236
+ + NS S ++E+ + D+
Sbjct: 397 LLSMPNETENSNSPLAEVYKRSYDV 421
>gi|238063529|ref|ZP_04608238.1| 3'-5' exonuclease [Micromonospora sp. ATCC 39149]
gi|237885340|gb|EEP74168.1| 3'-5' exonuclease [Micromonospora sp. ATCC 39149]
Length = 442
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + ++LL SL K +DWS+RPL E YAA+D L ++ + ++A++
Sbjct: 162 ERVGLAALTEQLLGFSLEKHHSAADWSSRPLPESWLTYAALDVELLTDLRDALDAELARQ 221
Query: 220 GNSCSSISEL 229
G S + E
Sbjct: 222 GKSAWAAEEF 231
>gi|41408900|ref|NP_961736.1| hypothetical protein MAP2802 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41397259|gb|AAS05119.1| hypothetical protein MAP_2802 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 428
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 135 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 194
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E D
Sbjct: 195 DVLAEQGKTDWAAQEFD 211
>gi|152996550|ref|YP_001341385.1| ribonuclease D [Marinomonas sp. MWYL1]
gi|150837474|gb|ABR71450.1| ribonuclease D [Marinomonas sp. MWYL1]
Length = 384
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 21/138 (15%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
WE L+ L V P ++K+ CS+ D+ FDR+ + + + Q
Sbjct: 75 WEPLRNLMVDPSVMKVFHA------------CSEDLDV-FDRL-----LGVLPTPFYDTQ 116
Query: 153 LGRKLPKETKSLANI--CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+G SL+ + E L I ++K+ SDW RPLT+ QK YAA+D L +++
Sbjct: 117 IGEAYASAQWSLSYVKLIHEYLQIEVAKDETRSDWVQRPLTDAQKRYAALDVVYLAKVYP 176
Query: 211 IFQVKVAQKGNSCSSISE 228
+ Q+ + N + E
Sbjct: 177 M-QIARLEAKNMLGWVME 193
>gi|440778250|ref|ZP_20957016.1| ribonuclease D [Mycobacterium avium subsp. paratuberculosis S5]
gi|436721353|gb|ELP45488.1| ribonuclease D [Mycobacterium avium subsp. paratuberculosis S5]
Length = 416
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 123 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 182
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E D
Sbjct: 183 DVLAEQGKTDWAAQEFD 199
>gi|384197155|ref|YP_005582899.1| 3'-5' exonuclease [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333110648|gb|AEF27664.1| 3'-5' exonuclease [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 415
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ N+ + + G
Sbjct: 118 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELENLMRRDLRAAG 175
>gi|184201057|ref|YP_001855264.1| putative ribonuclease D [Kocuria rhizophila DC2201]
gi|183581287|dbj|BAG29758.1| putative ribonuclease D [Kocuria rhizophila DC2201]
Length = 420
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L LA++ +ELL +LSKE DWS RPL + NYAA+D L+++ +
Sbjct: 127 GRLLGLRKVGLASMTEELLGFTLSKEHSAVDWSQRPLPVDWLNYAALDVEVLVQLRWATE 186
Query: 214 VKVAQKGNSCSSISELD 230
++A+ G ++ E +
Sbjct: 187 ERLARAGKLDWALEEFE 203
>gi|111023812|ref|YP_706784.1| ribonuclease III [Rhodococcus jostii RHA1]
gi|397737347|ref|ZP_10504019.1| 3'-5' exonuclease family protein [Rhodococcus sp. JVH1]
gi|110823342|gb|ABG98626.1| probable ribonuclease III [Rhodococcus jostii RHA1]
gi|396926786|gb|EJI94023.1| 3'-5' exonuclease family protein [Rhodococcus sp. JVH1]
Length = 429
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+ N+
Sbjct: 136 GRLAGFERVGLAAIVERTLGLELRKGHGAADWSKRPLPDSWLNYAALDVEVLVELRNVMA 195
Query: 214 VKVAQKGNSCSSISELD 230
++ ++G S + E +
Sbjct: 196 AELDEQGKSEWAAQEFE 212
>gi|448445250|ref|ZP_21590305.1| hypothetical protein C471_12431 [Halorubrum saccharovorum DSM 1137]
gi|445685556|gb|ELZ37910.1| hypothetical protein C471_12431 [Halorubrum saccharovorum DSM 1137]
Length = 171
Score = 52.0 bits (123), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQY 415
P+ L DVM LA +LR G DAA + E + L+ + E+R L+TRD +L
Sbjct: 19 PRVLLDVMCGKLATYLRMCGYDAAYALDRGIEDDDRLLSLAADEERTLITRDRELAARA- 77
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEA-FQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
+ + +L QL E+ A + + ++++ +RC CNGR + +
Sbjct: 78 -ADAVLLTERDVL--DQLRELAAAGYPVALADEP--TRCGACNGRVER----VDSEGGDD 128
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
P+ + + W+C DC + +W+G + + ++ +V
Sbjct: 129 GDDADPPEYVPNDRRPAWRCRDCGRWFWKGGHWESVAERLAEV 171
>gi|398888573|ref|ZP_10642840.1| hypothetical protein PMI31_00632 [Pseudomonas sp. GM55]
gi|398190560|gb|EJM77781.1| hypothetical protein PMI31_00632 [Pseudomonas sp. GM55]
Length = 246
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + +++ R++LTRD +LL+ + +I
Sbjct: 97 RFVADAHLGGLASLLRMSGFD--TLYDNGFEDGEIAEIAAQQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL E+ E L S + S C CN PL E ++E A+
Sbjct: 154 SHGCY-VHALKPSLQLRELYERLDLARSA-RPFSLCLHCN-----LPLH-EISLELAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
++P + F +C C ++YWEG+ +
Sbjct: 204 TQVPPRIGVLYSHFLRCDACQRVYWEGSHWRG 235
>gi|56475864|ref|YP_157453.1| hypothetical protein ebA822 [Aromatoleum aromaticum EbN1]
gi|56311907|emb|CAI06552.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 265
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D E+I ++ R++LTRD +LL+ + L
Sbjct: 97 RFVADAHLGGLAHLLRMTGFDTLYDNHFDDGEIEII--AGRDARIVLTRDRELLKRRTLT 154
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
V++L QQ+ E+ + L S + + C CN PL + A+
Sbjct: 155 HGCY--VRALKPAQQVREIFDRLDLAGSA-KPFTLCLDCNA-----PL---RPIGKAQVE 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + + +F C C +++WEG+ +
Sbjct: 204 DRLPPGVRASHTRFSTCDVCRRVFWEGSHW 233
>gi|118463563|ref|YP_882753.1| ribonuclease D [Mycobacterium avium 104]
gi|118164850|gb|ABK65747.1| ribonuclease D [Mycobacterium avium 104]
Length = 428
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 135 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 194
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E D
Sbjct: 195 DVLAEQGKTDWAAQEFD 211
>gi|312143504|ref|YP_003994950.1| hypothetical protein Halsa_1165 [Halanaerobium hydrogeniformans]
gi|311904155|gb|ADQ14596.1| protein of unknown function DUF82 [Halanaerobium hydrogeniformans]
Length = 248
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ 414
G P F+ DV + LA++LR D T S K + +E++D++ +EKR++++RD LL +
Sbjct: 102 GKPAFILDVHLGKLARYLRRFNFD--TVYSNKYDDQEIVDRSLQEKRIIISRDLGLLMRK 159
Query: 415 YLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ + +KS +Q E++E F L + SRC CN
Sbjct: 160 RVKWAKF--IKSDDPKKQFKEILERFDLAAYYNGKESRCPDCN 200
>gi|224023974|ref|ZP_03642340.1| hypothetical protein BACCOPRO_00691 [Bacteroides coprophilus DSM
18228]
gi|224017196|gb|EEF75208.1| hypothetical protein BACCOPRO_00691 [Bacteroides coprophilus DSM
18228]
Length = 204
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 82/187 (43%), Gaps = 38/187 (20%)
Query: 29 LSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
L+ +LVG+D E +P R N +V+LLQ+A A FL L+ I
Sbjct: 41 LNSHALVGVDTETRPSFRKGMVN--QVALLQVAT--------------ADACFLFRLNHI 84
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL-DITSIYN 146
LP + L+E F+ D+LK+G K D LS +R +P + + +
Sbjct: 85 GLP---DFLEE-FLQNDVLKVGLSLKDDFRMLSRR----------NRQDPRTGNWVELQD 130
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
++ H + E SL I L +SK + S+W LTE Q+ YAA DA +
Sbjct: 131 YVPHFGI------EEMSLQKIYALLFGEKISKTQRLSNWEAETLTEAQQLYAATDAWACV 184
Query: 207 EIFNIFQ 213
I+ +
Sbjct: 185 RIYEYLE 191
>gi|414871321|tpg|DAA49878.1| TPA: hypothetical protein ZEAMMB73_153639 [Zea mays]
Length = 532
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ + L+E F P K+ +D+I+L F C++ FD
Sbjct: 324 LGDYLREFFRDPTKKKVMHGAGRDIIWLQRDFSIYVCNL-FDT----------------G 366
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q + L + SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 367 QASKVLQMDRNSLEHLLHHFCGVAANKEYQAADWRLRPLPDEMIKYAREDTHYLLYIYDL 426
Query: 212 FQVKVAQKGNSCSS 225
++++ G+SC +
Sbjct: 427 MRLRLVN-GSSCEN 439
>gi|421475570|ref|ZP_15923511.1| hypothetical protein BURMUCF2_3605 [Burkholderia multivorans CF2]
gi|400229906|gb|EJO59733.1| hypothetical protein BURMUCF2_3605 [Burkholderia multivorans CF2]
Length = 274
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 33/199 (16%)
Query: 332 EKRLDD-----------IGDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAA 380
E+R+DD G PPP G +F+ D + GLA+ LR G D
Sbjct: 90 ERRVDDGDRIDVYPERARGAASAPPP--------GAWRFVADAHLGGLAQLLRLAGFDTR 141
Query: 381 TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAF 440
+ + E+ +E R++LTRD +LL+ + +++ Y V + +QL E+
Sbjct: 142 YDNHFRDD--EIAALAEREGRIVLTRDRELLKRRAIVRG-CY-VHAQQPAEQLRELFARL 197
Query: 441 QLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQL 500
L Q C +CN + A++AA R+P + ++ +F C C ++
Sbjct: 198 DL-APHMQPFRLCLRCN--------APLHALDAAAAAPRVPPGVRQRHRRFAACDVCRRV 248
Query: 501 YWEGTQYHNAVQKFIDVCK 519
+WEG+ + +Q ++ +
Sbjct: 249 FWEGSHWRR-MQALVEAMR 266
>gi|242001434|ref|XP_002435360.1| 3-5 exonuclease, putative [Ixodes scapularis]
gi|215498690|gb|EEC08184.1| 3-5 exonuclease, putative [Ixodes scapularis]
Length = 587
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 89/191 (46%), Gaps = 37/191 (19%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV-----FL 81
R ++ ++GLD+EW + H+ RV+LLQLA +N SV+ F
Sbjct: 52 RLCREAGVLGLDSEWTTVQGHRH---RVALLQLA-----------PNANFSVLLRLCQFT 97
Query: 82 LDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
+ S++ LP E L+++ I+K+G D L D G D V LD+
Sbjct: 98 EEASTVTLP---ESLRDILKDVKIIKVGVGVIDDAHKLFQ-------DYGID-VWGCLDL 146
Query: 142 TSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAA 199
L +LG PK L ++ + LL +S K L+CS+W LTE+Q YAA
Sbjct: 147 RHALGCL--PELGH-FPK--VGLRSLSESLLGVSPDKSWRLRCSNWEADVLTEKQIRYAA 201
Query: 200 IDAHCLIEIFN 210
DA ++IF+
Sbjct: 202 DDALLAVQIFD 212
>gi|421750550|ref|ZP_16187735.1| hypothetical protein B551_27110 [Cupriavidus necator HPC(L)]
gi|409770355|gb|EKN53056.1| hypothetical protein B551_27110 [Cupriavidus necator HPC(L)]
Length = 259
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 390 RELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL 449
RE+ ++E R++LTRD +LL+ I + Y V++L QL E+ L+ + +
Sbjct: 127 REIEAIAAREGRIVLTRDRELLKRSS-ITHGCY-VRALKPQAQLREIFGRLDLR-RQARP 183
Query: 450 MSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
S C CN PL + E A R+P + +++ +F C C +++WEG+ +
Sbjct: 184 FSLCLSCN-----VPLRAASSDEVAG---RVPPAVLERHERFSTCEACRRVFWEGSHWRR 235
Query: 510 AVQKFIDVCKLNE 522
++ +D L E
Sbjct: 236 -MRALVDSLMLPE 247
>gi|392566464|gb|EIW59640.1| hypothetical protein TRAVEDRAFT_147720 [Trametes versicolor
FP-101664 SS1]
Length = 850
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 36/194 (18%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
+ S EF + + + + +D E+ R+ + F V L+Q++ + E+D
Sbjct: 248 STSAEFAVMLEQMRGAREIAVDLEYHSYRTF-AGF--VCLMQISTR-------EAD---- 293
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
F++D +I L E L E+F PD++K+ + D+++L F
Sbjct: 294 ---FVVD--TIALRDEMEELNEVFTDPDVVKVFHGAESDIVWLQQDFN------------ 336
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
L + ++++ H ++ P+ LA + + D + K Q +DW RPL EE
Sbjct: 337 --LYVVNLFDTYHASKV-LDFPRH--GLATLLEMYCDFTADKRYQLADWRIRPLPEEMLQ 391
Query: 197 YAAIDAHCLIEIFN 210
YA D H L+ I++
Sbjct: 392 YARSDTHFLLFIYD 405
>gi|417749597|ref|ZP_12397989.1| ribonuclease D [Mycobacterium avium subsp. paratuberculosis S397]
gi|336458819|gb|EGO37776.1| ribonuclease D [Mycobacterium avium subsp. paratuberculosis S397]
Length = 428
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 135 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 194
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E D
Sbjct: 195 DVLAEQGKTDWAAQEFD 211
>gi|357471299|ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
gi|355506989|gb|AES88131.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
Length = 974
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 43/207 (20%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L LS+ G+D E Q S +S L+Q++ Q + D +L+D
Sbjct: 165 LVNVLSKEKFFGVDTE---QHSLRSFLGFTGLVQISTQ-------QED-------YLID- 206
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L E+L+ +F P I K+ D+++L F ++ + ++
Sbjct: 207 -TIALHDSMEILRPVFADPSICKVFHGADNDVLWLQRDF--------------HIYVVNL 251
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQC-----SDWSNRPLTEEQKNYAA 199
++ + L K KSLA + + ++ +K LQ DW RPL+ E +YA
Sbjct: 252 FDT---SKACEVLSKPQKSLAYLLETYCGVNTNKLLQVWPNYREDWRQRPLSAEMVHYAR 308
Query: 200 IDAHCLIEIFN--IFQVKVAQKGNSCS 224
DAH L+ I N I ++K NSCS
Sbjct: 309 TDAHYLLYIANCLIDELKQLDNENSCS 335
>gi|337755515|ref|YP_004648026.1| ribonuclease D [Francisella sp. TX077308]
gi|336447120|gb|AEI36426.1| Ribonuclease D [Francisella sp. TX077308]
Length = 364
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 42/187 (22%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD- 83
+ +AL + + +D E+ R++ +P + L+Q+A + +FL+D
Sbjct: 12 VVKALKNAKEIAVDTEFYWMRTY---YPELCLVQIATENE--------------IFLIDT 54
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
L + LK++F +I K+ D+ + F C++
Sbjct: 55 LEDLDFSK----LKDIFEDTNIQKIIHSATNDIPIIKRFF---DCEV------------- 94
Query: 144 IYNHLHHKQLGRKL--PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAID 201
N++ QL + SL + K++LDI + KE Q SDW RPL+++Q +YA D
Sbjct: 95 --NNIFDTQLAASFLGTQSQISLKALLKDILDIEMEKESQFSDWRKRPLSQKQFDYALKD 152
Query: 202 AHCLIEI 208
LIEI
Sbjct: 153 VEHLIEI 159
>gi|374632984|ref|ZP_09705351.1| hypothetical protein MetMK1DRAFT_00020950 [Metallosphaera
yellowstonensis MK1]
gi|373524468|gb|EHP69345.1| hypothetical protein MetMK1DRAFT_00020950 [Metallosphaera
yellowstonensis MK1]
Length = 175
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D M+ LA+ LR +G D T K E ++ + ++KR+++TRD L
Sbjct: 4 KFIVDAMLGKLARWLRILGYD--TLYYKDAEDWRIVKRAEEDKRIVVTRDRGLCNRARKR 61
Query: 418 KNQIYRVKSLLKNQQLL-EVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ + V + ++ L E+ + L + + SRCT+CNG ++
Sbjct: 62 GVECFLVVPDTEVERTLAELAVKYGLYLDVNPEASRCTECNGILEKR------------- 108
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKLNE 522
DKNL W+C C + YW+G + + I L E
Sbjct: 109 ---------DKNL--WRCTRCGKEYWKGRHWDTITEVLIKAQALME 143
>gi|448358655|ref|ZP_21547332.1| hypothetical protein C482_12012 [Natrialba chahannaoensis JCM
10990]
gi|445645237|gb|ELY98243.1| hypothetical protein C482_12012 [Natrialba chahannaoensis JCM
10990]
Length = 164
Score = 51.6 bits (122), Expect = 9e-04, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKP---EPRELIDQTSKEKRVLLTRDAKLLRHQ 414
+FL D M GL +LR D ++P +L+ + E R L+TRD +L
Sbjct: 2 RFLLDTMCGGLVAYLRMCDYDTVYAGDREPVLESDDDLLAVAAAEDRTLVTRDTELAAR- 60
Query: 415 YLIKNQIYRVKSLLKNQQLLEVIEA---FQLKISEDQLMSRCTKCNGRFIQKPLSTEEAV 471
+ + + +L +QL E+ EA F+L S C +CNG + S E
Sbjct: 61 ---ADDVILLTALEVEEQLGELSEAGVAFELAAEP----SYCGRCNGVLERVDPSAETPE 113
Query: 472 EAAKGFQRIPDCLFDKN-----LQFWQCMDCNQLYWEGTQY 507
A + D DK+ + W+C C Q +W G+ +
Sbjct: 114 YAPDPAEDSVDDTGDKDADTEVMAVWRCQSCGQYFWRGSHW 154
>gi|118379202|ref|XP_001022768.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89304535|gb|EAS02523.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 645
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
T L C L+ K+LQ S+WS+RPL+EEQ NYAA+D+H LI+I
Sbjct: 88 TYLLQKYCDYTLEKKEKKQLQLSEWSDRPLSEEQLNYAALDSHFLIKI 135
>gi|340966615|gb|EGS22122.1| exosome complex exonuclease rrp6-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 859
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
+P E+L E+F P I+K+ D+I+L D+G L I +++
Sbjct: 285 VPWRHKLEILNEVFADPKIVKVLHGAFMDIIWLQR-------DLG-------LYIVGLFD 330
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ + L KSLA + K D K+ Q +DW RPL EE YA D H L+
Sbjct: 331 TYYASDV---LGYPGKSLAYLLKRFADFDADKKYQLADWRIRPLPEEMFYYARSDTHFLL 387
Query: 207 EIFNIFQVKVAQ 218
I++ + ++A+
Sbjct: 388 YIYDHLRNELAE 399
>gi|322799595|gb|EFZ20873.1| hypothetical protein SINV_12011 [Solenopsis invicta]
Length = 813
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
S + +L+D ++ L S L E+F P ILK+ D+++L
Sbjct: 306 STITTDYLID--TLTLRSELHRLNEIFTKPSILKVFHGADMDILWLQRDLS--------- 354
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
+ N Q R+L SLA++ K+ DI L+K+ Q +DW RPL E
Sbjct: 355 --------LYVVNMFDTHQAARQLNLPYLSLAHLIKKYCDIDLNKQFQLADWRIRPLPLE 406
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSI 226
YA D L+ I ++ ++ N S+I
Sbjct: 407 LTRYAREDTRYLLYIKDMLNNELIDAANGKSNI 439
>gi|327291874|ref|XP_003230645.1| PREDICTED: exosome component 10-like, partial [Anolis carolinensis]
Length = 329
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 19/146 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F+LD ++ L +L E F P I+K+ D+ +L F ++ FD
Sbjct: 122 FILD--ALELRGDLYVLNETFTDPAIIKVLHGADSDVEWLQRDFGLYLVNV-FDT----- 173
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
Q R+L SL ++ K ++ +K+ Q +DW RPL EE NYA
Sbjct: 174 -----------HQAARQLSLGRHSLDHLLKLYCNVDANKQYQLADWRIRPLPEEMLNYAR 222
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSS 225
D H L+ I++ + ++ ++GN +
Sbjct: 223 DDTHYLLYIYDRVRTELWERGNELPA 248
>gi|443695610|gb|ELT96477.1| hypothetical protein CAPTEDRAFT_99256, partial [Capitella teleta]
Length = 627
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 23/156 (14%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
FL+D ++ L LL +F P I+K+ +QD+ +L D+G +
Sbjct: 282 FLVD--ALALREHLHLLNNVFTDPGIVKVFHGAEQDIHWLQR-------DLG-------V 325
Query: 140 DITSIYNHLHH-KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
+ ++++ H K LG LP+ SLA++ + K+ Q +DW RPL E+ +YA
Sbjct: 326 YVVNMFDTFHAAKALG--LPR--LSLAHLLTTYCSVKPDKKFQMADWRIRPLPEQLVHYA 381
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNSCSSI--SELDSS 232
D H L+ + ++ + ++ GN +++ S LDSS
Sbjct: 382 REDTHYLLYVHDLLKNQLLDAGNEAANLLCSVLDSS 417
>gi|335438029|ref|ZP_08560784.1| hypothetical protein HLRTI_12875 [Halorhabdus tiamatea SARL4B]
gi|334893203|gb|EGM31420.1| hypothetical protein HLRTI_12875 [Halorhabdus tiamatea SARL4B]
Length = 149
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRH--- 413
+ L D M+ LA +LR G DAA + E + L+ E RVLLTRD +L
Sbjct: 4 RLLLDAMLGKLATYLRMCGYDAAYALDRGVEADDRLLAIADGEDRVLLTRDRQLAAQATA 63
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEA-FQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVE 472
L++++ R QL E+ A + L ++ + + RC +CNGR +
Sbjct: 64 SLLLESRDVR-------DQLRELQTAGYDLTLAREPV--RCGQCNGR-----------LN 103
Query: 473 AAKGFQRIPDCLFDKNLQ-FWQCMDCNQLYWEGTQYHN 509
A P + D + + W+C DC Q +W G+ + +
Sbjct: 104 AVDPDDPTPPSVPDPDAESVWKCRDCGQYFWRGSHWDD 141
>gi|448419746|ref|ZP_21580590.1| hypothetical protein C474_17664 [Halosarcina pallida JCM 14848]
gi|445674660|gb|ELZ27197.1| hypothetical protein C474_17664 [Halosarcina pallida JCM 14848]
Length = 174
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 19/160 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAA--TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQY 415
L D M+ LA +LR G DAA P ++D +E R L+TRD +L
Sbjct: 27 SLLLDSMLGKLATYLRMCGYDAAYVLDDGPDPGDDAVLDWAREEGRTLVTRDRRLAAR-- 84
Query: 416 LIKNQIYRVKSLLKNQQLLEVIEA-FQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAA 474
++ + S QL E A + +++ + +RC CN P++ +A E+
Sbjct: 85 --ADRSVLLSSKAVTDQLAEFAAAGYPVELGDRP--TRCGSCNA-----PVAPVDAGESV 135
Query: 475 KGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
+ P W+C DC Q++W G+ + + ++
Sbjct: 136 PDYAPDP-----AERPLWRCRDCEQVFWRGSHWTDVAERL 170
>gi|270007326|gb|EFA03774.1| hypothetical protein TcasGA2_TC013885 [Tribolium castaneum]
Length = 890
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
+ N Q + L SLA + K+ +++ +K+ Q +DW RPL +E K+YA D H
Sbjct: 351 VVNMFDTHQAAKALQYPALSLAFLMKKFCNVTPNKQFQLADWRIRPLPDELKSYAREDTH 410
Query: 204 CLIEIFNIFQVKVAQKGNSCSSI 226
LI I+ + + ++ K N C +
Sbjct: 411 YLIYIYKMMKRELLHKTNKCDKL 433
>gi|346326755|gb|EGX96351.1| exosome complex exonuclease Rrp [Cordyceps militaris CM01]
Length = 852
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 21/138 (15%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN-HLHHKQ 152
E+L E+F P I+K+ D+I+L D+G L + +++ + +Q
Sbjct: 285 EVLNEVFADPSIVKVFHGAYMDMIWLQR-------DLG-------LYVNGLFDTYFACQQ 330
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG +SLA + + D K+ Q +DW RP+ EE YA D H L+ I++
Sbjct: 331 LGYS----GRSLAFLLSKFADFDADKQYQLADWRIRPIPEEMLYYARSDTHYLLHIYD-- 384
Query: 213 QVKVAQKGNSCSSISELD 230
QV+ +S S+ E D
Sbjct: 385 QVRNDLVSSSNRSVPEQD 402
>gi|150951537|ref|XP_001387875.2| exosome component 3'-5' exonuclease [Scheffersomyces stipitis CBS
6054]
gi|149388676|gb|EAZ63852.2| ribosomal RNA processing 3'-5' exonuclease [Scheffersomyces
stipitis CBS 6054]
Length = 792
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 38/202 (18%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
E + L +SS + +D E RS+ + V L+Q+ SN +
Sbjct: 241 ELQKMVEELKKSSEIAVDLEHHDYRSY---YGIVCLMQI--------------SNRDQDW 283
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
++D ++ L E L +F +P I+K+ D+I+L D+G L
Sbjct: 284 IID--TLALRDDLECLNTVFTNPHIVKVFHGAFMDIIWLQR-------DLG-------LY 327
Query: 141 ITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
I S+++ H K LG PK SLA + + SK+ Q +DW RPL+ YA
Sbjct: 328 IVSLFDTYHASKSLG--FPK--FSLAYLLETFAHFKTSKKYQLADWRIRPLSPPMMAYAR 383
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ IF+ + K+ GN
Sbjct: 384 SDTHFLLSIFDQLKNKLIDAGN 405
>gi|338722160|ref|XP_003364495.1| PREDICTED: exosome component 10 isoform 2 [Equus caballus]
Length = 861
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F
Sbjct: 338 FIVD--TLELRSDMYILNESFTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKRYCSVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|398886337|ref|ZP_10641222.1| hypothetical protein PMI32_04981 [Pseudomonas sp. GM60]
gi|398190212|gb|EJM77450.1| hypothetical protein PMI32_04981 [Pseudomonas sp. GM60]
Length = 246
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T + E E+ + +++ R++LTRD +LL+ + +I
Sbjct: 97 RFVADAHLGGLANLLRMSGFD--TLYNNGFEDGEIAEIAAQQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL E+ E L S + S C CN PL E + E A+
Sbjct: 154 SHGCY-VHALKPSLQLRELYERLDLARSA-RPFSLCLHCN-----LPLH-EISPELAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
++P + F +C C ++YWEG+ + +
Sbjct: 204 PQVPPRVATLYSHFLRCDACQRVYWEGSHWRS 235
>gi|296129572|ref|YP_003636822.1| 3'-5' exonuclease [Cellulomonas flavigena DSM 20109]
gi|296021387|gb|ADG74623.1| 3'-5' exonuclease [Cellulomonas flavigena DSM 20109]
Length = 417
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L E LA + + L + L+KE DWS RPL E YAA+D L+E+ +
Sbjct: 136 RLLGMERVGLAAVVADTLGLGLAKEHSAVDWSTRPLPTEWLRYAALDVEVLVEVRQVLAE 195
Query: 215 KVAQKGNSCSSISELDS 231
++A G + + E ++
Sbjct: 196 RLAVSGKAEWARQEFEA 212
>gi|268573492|ref|XP_002641723.1| Hypothetical protein CBG10060 [Caenorhabditis briggsae]
Length = 729
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 6 RKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGP 65
+ P+KI + T +E + + + VG D+E++P +N +V+ +QL
Sbjct: 363 KYPIKI-VKTESELEDLCVEMDEVENGTFVGYDSEFRPGHLTDTNTIKVATIQLCFH--- 418
Query: 66 RFNPESDESNASVVFLLDLSSIPLPS-IW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
++ ++L + LP +W L + +F S + +GF K D+ L S
Sbjct: 419 --------DTTYLIDCVELENEKLPDKMWIRLYQSIFESKKLTVVGFDLKHDIEALFSIH 470
Query: 124 -CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQC 182
Q I + +E ++ + L + ++ L N+ +ELLDI++ K Q
Sbjct: 471 PIRQQFKI--EDIENFVCVRRFSEILMEIDINILNLSKSCRLVNLSEELLDITIDKSEQN 528
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+W +RPL + Q YA +D+ ++++F
Sbjct: 529 GNWMSRPLRKSQIVYATMDSVVVLKVF 555
>gi|320100381|ref|YP_004175973.1| hypothetical protein [Desulfurococcus mucosus DSM 2162]
gi|319752733|gb|ADV64491.1| protein of unknown function DUF82 [Desulfurococcus mucosus DSM
2162]
Length = 183
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ 414
G KF+ D M+ LA+ LR +G D T + E ++ + E R++LTRD L H
Sbjct: 4 GEAKFIVDAMLGSLARWLRILGYD--TVYGSRMEDWLILRRAELEGRIILTRDRGL--HH 59
Query: 415 YLIKNQIYRVKSLLKNQQLLEVIEAFQ----LKISEDQLMSRCTKCNGRFIQKPLSTEEA 470
+K + + LL++ L ++ +++ D +RC + N PL +
Sbjct: 60 KALKRGLKSI--LLQDDDLASMLAKVSGLTGVRLYVDYERTRCPEDN-----TPLRKVDK 112
Query: 471 VEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
E ++P ++ + FW C C ++YW G +
Sbjct: 113 EEVK---DKVPPRVYSMHEDFWVCPRCGKVYWVGNHW 146
>gi|167043006|gb|ABZ07718.1| putative protein of unknown function DUF82 [uncultured marine
microorganism HF4000_ANIW141A21]
Length = 163
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 19/164 (11%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
+ D M+ LA+ LR G D T K E ++ E R L+T D +L H+ ++
Sbjct: 7 LIVDAMLGSLARKLRIYGFD--TVYDKDSEDSSMLVAAKTESRTLVTCDKEL--HKLAVQ 62
Query: 419 NQIYRV--KSLLKNQQLLEVIEAFQLK---ISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ + L+ ++++EVI LK I ++ SRC CNG I V
Sbjct: 63 RNLQSILLNKGLEVEKMVEVIRGLDLKPLRICPEE--SRCPLCNGDLI--------GVSN 112
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
IP + + +F+ C C + YWEG+ + DV
Sbjct: 113 LIAPSSIPQSIRQHHQRFYICRLCGKSYWEGSHWEKISSFSADV 156
>gi|309778788|ref|ZP_07673561.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|404396004|ref|ZP_10987801.1| hypothetical protein HMPREF0989_04062 [Ralstonia sp. 5_2_56FAA]
gi|308922496|gb|EFP68120.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|348612065|gb|EGY61690.1| hypothetical protein HMPREF0989_04062 [Ralstonia sp. 5_2_56FAA]
Length = 258
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FLCD + A+ LR G D A + E + +E ++L+RD +LL+ + + +
Sbjct: 87 FLCDAHLGATARLLRMAGFDTAYDNNYADAAIEALAH--EEDWIVLSRDRELLKRRGIRR 144
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
R + Q+ E++ +L + SRC +CN + + LS EEA +
Sbjct: 145 GAFIRARE--PQAQMREIVTRLRLA-DVAKPFSRCLECN--VLLRMLSPEEASAS----- 194
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQYH--NAV 511
+P + ++ F C C ++YW G+ + NAV
Sbjct: 195 -VPPRVRERQRLFSTCDVCRRVYWPGSHWARMNAV 228
>gi|326496869|dbj|BAJ98461.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 524
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I LKE+F P K+ +D+++L F C++ FD
Sbjct: 26 IGSYLKEIFKDPTKRKVMHGADRDIMWLQRDFRVYVCNL-FDT----------------G 68
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L E SL ++ ++ +K Q +DW +RPL++E YA D H L+ I+++
Sbjct: 69 QASRVLQMERNSLEHLLHHFCGVTANKIYQNADWRSRPLSDEMIKYAREDTHYLLYIYDL 128
Query: 212 FQVKVAQKGNS 222
++++ ++ S
Sbjct: 129 MRLRLQRESTS 139
>gi|406573982|ref|ZP_11049722.1| putative ribonuclease D [Janibacter hoylei PVAS-1]
gi|404556583|gb|EKA62045.1| putative ribonuclease D [Janibacter hoylei PVAS-1]
Length = 555
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ISL+KE DWS RPL E YAA+D L E+ N+ + +A + S
Sbjct: 144 GLAAVIEHYLGISLAKEHSAVDWSTRPLPEPWLRYAALDVEVLTEVRNLMGIDLAAQDKS 203
Query: 223 CSSISELDS 231
+ E ++
Sbjct: 204 EWARQEFEA 212
>gi|383819190|ref|ZP_09974466.1| 3'-5' exonuclease [Mycobacterium phlei RIVM601174]
gi|383337161|gb|EID15542.1| 3'-5' exonuclease [Mycobacterium phlei RIVM601174]
Length = 420
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL + L K +DWS RPL +E NYAA+D LI++ +
Sbjct: 138 GRLAGYEKVNLAAMVQRLLGLQLMKGHGAADWSKRPLPDEWLNYAALDVEVLIDLRHAVA 197
Query: 214 VKVAQKGNSCSSISELD 230
+ ++G S + E +
Sbjct: 198 AVLEEQGKSAWAAEEFE 214
>gi|372271279|ref|ZP_09507327.1| ribonuclease D [Marinobacterium stanieri S30]
Length = 393
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ L + LD+ L KE SDW RPLT EQ+ YAA+D L + + + ++ QKG
Sbjct: 132 SMGLRRLVAHALDVELDKEETTSDWLQRPLTPEQERYAALDVAYLPTLALMQRHELEQKG 191
Query: 221 ------NSCS----SISELDSSNLDLGLKGILEK---PDIGNKTV------RFKLCEALD 261
+C+ +++ELD ++ + + + D+ + R + C D
Sbjct: 192 RLSWAEEACAEVGQNVAELDEADPETYFQRFSQAWHFDDVRRAALRDLSAWRERTCRKRD 251
Query: 262 IIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRECDKAPKTSKKK 319
+ R +Q L E +N + +++R+YGE+IL AP+++ ++
Sbjct: 252 LSRNRLLRNQVLLEVAERLPQTINQLDKIVQRGRVIREYGEEILAL-VKAAPESASQR 308
>gi|414871320|tpg|DAA49877.1| TPA: hypothetical protein ZEAMMB73_153639 [Zea mays]
Length = 901
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 18/132 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ + L+E F P K+ +D+I+L F C++ FD
Sbjct: 324 LGDYLREFFRDPTKKKVMHGAGRDIIWLQRDFSIYVCNL-FDT----------------G 366
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q + L + SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 367 QASKVLQMDRNSLEHLLHHFCGVAANKEYQAADWRLRPLPDEMIKYAREDTHYLLYIYDL 426
Query: 212 FQVKVAQKGNSC 223
++++ G+SC
Sbjct: 427 MRLRLVN-GSSC 437
>gi|345306474|ref|XP_001508312.2| PREDICTED: Werner syndrome ATP-dependent helicase-like
[Ornithorhynchus anatinus]
Length = 1751
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 35/185 (18%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
+L+ S++G D EW P S + RV+L+QL SD+ +L +SS
Sbjct: 323 SLNDGSVIGFDIEWPPTYS-KGKLGRVALIQLCV---------SDQK----CYLFHISS- 367
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
+ + LK L + I K G + D L S F +I +++ ++++ + N
Sbjct: 368 -MSGFPKGLKMLLENEAIRKAGVGIEGDQWKLLSDF-----EI---KLKSFVELADVANE 418
Query: 148 LHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDAHC 204
KL KE SL ++ K L + L K ++CS W PLTE+QK YAA DA+
Sbjct: 419 --------KLKCKEKWSLNSLVKHLFNKQLLKDKAIRCSSWDEFPLTEDQKLYAATDAYA 470
Query: 205 LIEIF 209
I+
Sbjct: 471 GFIIY 475
>gi|326502996|dbj|BAJ99123.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I LKE+F P K+ +D+++L F C++ FD
Sbjct: 94 IGSYLKEIFKDPTKRKVMHGADRDIMWLQRDFRVYVCNL-FDT----------------G 136
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L E SL ++ ++ +K Q +DW +RPL++E YA D H L+ I+++
Sbjct: 137 QASRVLQMERNSLEHLLHHFCGVTANKIYQNADWRSRPLSDEMIKYAREDTHYLLYIYDL 196
Query: 212 FQVKVAQKGNS 222
++++ ++ S
Sbjct: 197 MRLRLQRESTS 207
>gi|189237006|ref|XP_966807.2| PREDICTED: similar to Rrp6 CG7292-PB [Tribolium castaneum]
Length = 947
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
+ N Q + L SLA + K+ +++ +K+ Q +DW RPL +E K+YA D H
Sbjct: 351 VVNMFDTHQAAKALQYPALSLAFLMKKFCNVTPNKQFQLADWRIRPLPDELKSYAREDTH 410
Query: 204 CLIEIFNIFQVKVAQKGNSCSSI 226
LI I+ + + ++ K N C +
Sbjct: 411 YLIYIYKMMKRELLHKTNKCDKL 433
>gi|70606586|ref|YP_255456.1| hypothetical protein Saci_0793 [Sulfolobus acidocaldarius DSM 639]
gi|449066807|ref|YP_007433889.1| hypothetical protein SacN8_03845 [Sulfolobus acidocaldarius N8]
gi|449069080|ref|YP_007436161.1| hypothetical protein SacRon12I_03830 [Sulfolobus acidocaldarius
Ron12/I]
gi|68567234|gb|AAY80163.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
gi|449035315|gb|AGE70741.1| hypothetical protein SacN8_03845 [Sulfolobus acidocaldarius N8]
gi|449037588|gb|AGE73013.1| hypothetical protein SacRon12I_03830 [Sulfolobus acidocaldarius
Ron12/I]
Length = 155
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 28/159 (17%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
KF+ D M+ L++ LR +G D T SK E ++I + R++LT D L
Sbjct: 5 KFIADAMLGKLSRWLRILGYD--TLYSKDFEDWQIIKIAKNDSRIILTMDRGLCYRAKKN 62
Query: 418 KNQIYRVKSLLKNQQLLEVIE-AFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
+ + V + L +++L ++ +++ ++ D SRCTKCNG I K +
Sbjct: 63 DLECFYVNTELNIEEILAMLAIKYKIDLTADPNYSRCTKCNG--ILKKV----------- 109
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
D+N W+C C + YW+G + ++Q I
Sbjct: 110 ---------DENR--WKCTRCKKEYWKGMHWK-SIQNII 136
>gi|225352286|ref|ZP_03743309.1| hypothetical protein BIFPSEUDO_03902 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157533|gb|EEG70872.1| hypothetical protein BIFPSEUDO_03902 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 243
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ + ++ ++G
Sbjct: 132 GLAAVTEHYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETTMRAELQKQGKI 191
Query: 223 CSSISELD 230
+ E D
Sbjct: 192 EWAEEEFD 199
>gi|149695529|ref|XP_001492550.1| PREDICTED: exosome component 10 isoform 1 [Equus caballus]
Length = 886
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F
Sbjct: 338 FIVD--TLELRSDMYILNESFTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKRYCSVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|210147550|ref|NP_957383.2| exosome component 10 [Danio rerio]
Length = 899
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 26/164 (15%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F L
Sbjct: 336 FIID--TLELRSEMYILNETFTDPAIVKVFHGADSDIEWLQKDFG--------------L 379
Query: 140 DITSIYNHLHHKQ---LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ ++++ H + LGR SL ++ K D+S K Q +DW RPL +E
Sbjct: 380 YVVNMFDTHHAARCLNLGRN------SLDHLLKVYCDVSSDKRYQLADWRIRPLPDEMLK 433
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSS-ISELDSSNLDLGLK 239
YA D H L+ +++ + + GN ++ I ++ + + DL LK
Sbjct: 434 YAQADTHYLLYVYDRVRADLFDGGNGQATLIQQVWTKSRDLSLK 477
>gi|189096244|pdb|3CYM|A Chain A, Crystal Structure Of Protein Bad_0989 From Bifidobacterium
Adolescentis
Length = 440
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ + ++ ++G
Sbjct: 134 GLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETKMRAELKRQGKM 193
Query: 223 CSSISELD 230
+ E D
Sbjct: 194 EWAQEEFD 201
>gi|154488712|ref|ZP_02029561.1| hypothetical protein BIFADO_02019 [Bifidobacterium adolescentis
L2-32]
gi|154082849|gb|EDN81894.1| 3'-5' exonuclease [Bifidobacterium adolescentis L2-32]
Length = 431
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ + ++ ++G
Sbjct: 132 GLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETKMRAELKRQGKM 191
Query: 223 CSSISELD 230
+ E D
Sbjct: 192 EWAQEEFD 199
>gi|299473101|emb|CBN77494.1| 3\'-5\' exonuclease family protein [Ectocarpus siliculosus]
Length = 192
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
S+ E L F SP+++KLG DL +S F ++V L++ ++ L
Sbjct: 52 SLSEALSGPFGSPNVVKLGVGLANDLDEMSFAFEETPF---LEQVPGVLNLNALNTKLTG 108
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+ L + L SLSK Q S W+ RPL Q NYAA DA + +F+
Sbjct: 109 GACNDQGIPRDLGLRKLASMYLGRSLSKRQQMSRWARRPLQSAQVNYAACDALVALRVFD 168
Query: 211 IFQVKVA 217
+ +
Sbjct: 169 ALLLALG 175
>gi|313140484|ref|ZP_07802677.1| ribonuclease D [Bifidobacterium bifidum NCIMB 41171]
gi|421735613|ref|ZP_16174522.1| ribonuclease D [Bifidobacterium bifidum IPLA 20015]
gi|313132994|gb|EFR50611.1| ribonuclease D [Bifidobacterium bifidum NCIMB 41171]
gi|407297096|gb|EKF16569.1| ribonuclease D [Bifidobacterium bifidum IPLA 20015]
Length = 428
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ Q ++ +G
Sbjct: 132 GLAAVTEHYLGVTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELRRKMQRELKSQGKD 191
Query: 223 CSSISELDSSNLDLGLKGILEKP 245
+ E + L G+ E P
Sbjct: 192 GWADEEFRYA-LQTGMGPRREHP 213
>gi|119026007|ref|YP_909852.1| hypothetical protein BAD_0989 [Bifidobacterium adolescentis ATCC
15703]
gi|118765591|dbj|BAF39770.1| hypothetical protein BAD_0989 [Bifidobacterium adolescentis ATCC
15703]
Length = 431
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ + ++ ++G
Sbjct: 132 GLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETKMRAELKRQGKM 191
Query: 223 CSSISELDSSNLDLGL----KGILEKPDIGNKTVRFKLCEALDIIRA 265
+ E D + L GL + ++ + + T + +AL I+RA
Sbjct: 192 EWAQEEFDYA-LKEGLGPRKEHLIPWMHVSHITEVMRDRQALAIVRA 237
>gi|453363937|dbj|GAC80252.1| ribonuclease D [Gordonia malaquae NBRC 108250]
Length = 404
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + L + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 127 GRLLNVPKVNLAAMVAGFLHLGLAKGHGAADWSQRPLPDDWLNYAALDVEVLVELRDAVS 186
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYS 270
+ + G + E +L +P K R++ L+ ++ T Y+
Sbjct: 187 AALREAGRETWAAQE---------FAAVLARPAPEPKPDRWRRTSNLNTLKTTREYA 234
>gi|358458928|ref|ZP_09169132.1| protein of unknown function DUF82 [Frankia sp. CN3]
gi|357077737|gb|EHI87192.1| protein of unknown function DUF82 [Frankia sp. CN3]
Length = 249
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 391 ELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLM 450
EL+ Q +E+RVLLTRD LL + L V+ + Q +V++ F ++ +
Sbjct: 121 ELLAQAIRERRVLLTRDRGLLFRRSLPHGAY--VRGDRPDDQAHDVLDRFAPPLAP---L 175
Query: 451 SRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
+RC C +P+ EE ++ + R F +C+ C Q+YW G
Sbjct: 176 TRCVSCGAEL--RPVPREEVLDKVEPGTR------RTATHFTRCIACGQIYWRGAH 223
>gi|307721158|ref|YP_003892298.1| hypothetical protein Saut_1238 [Sulfurimonas autotrophica DSM
16294]
gi|306979251|gb|ADN09286.1| protein of unknown function DUF82 [Sulfurimonas autotrophica DSM
16294]
Length = 152
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P F+ D + LAK+LR +G D T + +LI E R +LTRD L +
Sbjct: 7 PTFIADCHLGKLAKYLRIMGFD--TLYFSSIDDNDLIALARAESRTILTRDRALHERK-- 62
Query: 417 IKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKG 476
++ + ++ + QL + F LK + QL SRC CN T + +E A+
Sbjct: 63 -ESPSFYLQPISNLAQLQALQNHFHLK--KYQLTSRCLICN--------ITLKKIEKAEI 111
Query: 477 FQRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P + +F C C+++YW G Y
Sbjct: 112 EDKLPPKVKYYFSEFETCPKCHRIYWHGDHY 142
>gi|218781841|ref|YP_002433159.1| hypothetical protein Dalk_4005 [Desulfatibacillum alkenivorans
AK-01]
gi|218763225|gb|ACL05691.1| protein of unknown function DUF82 [Desulfatibacillum alkenivorans
AK-01]
Length = 151
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 19/153 (12%)
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYL 416
P D + LAK LR +G D T RE + +++ R+L+TR L
Sbjct: 3 PLLAVDRSMGRLAKWLRLLGYD--TVFDPGMGDREFL-SLAEQGRILITRTRALFG---- 55
Query: 417 IKNQIYRVKSLLKNQ---QLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
K R+ ++ QL E ++ L+I + RC +CN P+ E +E
Sbjct: 56 -KAGEARMVEIVDGDPKVQLAETVKRLGLRIDRSKAFGRCIRCN-----VPV---EPIER 106
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
+ R+PD +F+ + F C C ++YW G+
Sbjct: 107 ERAANRVPDYVFETHQDFAHCPRCKRIYWRGSH 139
>gi|311064600|ref|YP_003971325.1| ribonuclease D [Bifidobacterium bifidum PRL2010]
gi|310866919|gb|ADP36288.1| Ribonuclease D [Bifidobacterium bifidum PRL2010]
Length = 428
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ Q ++ +G
Sbjct: 132 GLAAVTEHYLGVTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELRRKMQRELKAQGKD 191
Query: 223 CSSISELDSSNLDLGLKGILEKP 245
+ E + L G+ E P
Sbjct: 192 GWADEEFRYA-LQTGMGPRREHP 213
>gi|163782924|ref|ZP_02177919.1| DNA polymerase I (PolI) [Hydrogenivirga sp. 128-5-R1-1]
gi|159881604|gb|EDP75113.1| DNA polymerase I (PolI) [Hydrogenivirga sp. 128-5-R1-1]
Length = 576
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+F++DL LP ++LKEL ++ KF +Y +G + PY
Sbjct: 47 IFVIDL--FDLPEAVDVLKELIAKKGVVGHNLKFDLKFMY----------PLG---IVPY 91
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
++ L E SL+++ + LL ++ K LQ SDWS LT++Q YA
Sbjct: 92 ATFDTMIGSF-------LLGYERHSLSHVAERLLGYTMDKSLQLSDWSRTALTKQQIEYA 144
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNS 222
A D + E+F + K+ G +
Sbjct: 145 ATDVLVVRELFYKMREKLNALGET 168
>gi|302415657|ref|XP_003005660.1| 3'-5' exonuclease domain-containing protein [Verticillium
albo-atrum VaMs.102]
gi|261355076|gb|EEY17504.1| 3'-5' exonuclease domain-containing protein [Verticillium
albo-atrum VaMs.102]
Length = 894
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F +P I+K+ D+ +L D+G L I +++ ++
Sbjct: 331 EVLNEVFTNPKIVKVFHGAHMDMQWLQR-------DLG-------LYINGLFDTFFAAEI 376
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
L +SLA + K +D K+ Q +DW RPL EE YA D H L+ IF+
Sbjct: 377 ---LGYPQRSLAYLLKRFVDFDADKKYQMADWRIRPLPEEMFYYARSDTHYLLYIFD 430
>gi|421734277|ref|ZP_16173355.1| ribonuclease D [Bifidobacterium bifidum LMG 13195]
gi|407077784|gb|EKE50612.1| ribonuclease D [Bifidobacterium bifidum LMG 13195]
Length = 428
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ Q ++ +G
Sbjct: 132 GLAAVTEHYLGVTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELRRKMQRELKAQGKD 191
Query: 223 CSSISELDSSNLDLGLKGILEKP 245
+ E + L G+ E P
Sbjct: 192 GWADEEFRYA-LQTGMGPRREHP 213
>gi|167535101|ref|XP_001749225.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772378|gb|EDQ86031.1| predicted protein [Monosiga brevicollis MX1]
Length = 411
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
SLA++ + L+ +SL+K Q +DW RPL E +YAA+DA+ L+++ +I KV G
Sbjct: 342 SLADLVQGLVGVSLAKHEQLADWERRPLRPESLHYAALDAYVLLQVLDILS-KVQATGQ 399
>gi|389860337|ref|YP_006362576.1| hypothetical protein TCELL_0013 [Thermogladius cellulolyticus 1633]
gi|388525240|gb|AFK50438.1| hypothetical protein TCELL_0013 [Thermogladius cellulolyticus 1633]
Length = 162
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 364 MVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYR 423
M+ +A+ LR +G D R + E +++ E RV++TRD L H +KN +
Sbjct: 1 MLGSIARWLRILGYDVVYDR--RYEDWQILKIARDEDRVVVTRDRAL--HHKALKNGLKS 56
Query: 424 V-----KSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
V + K+ ++ ++ +L + ++ +RC CNG ++ E KG
Sbjct: 57 VYVENPGDIPKSLAVIALLTNIRLAVDFER--TRCPLCNGELVKV------NKERVKG-- 106
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++PD ++ FW C C +YW G+ +
Sbjct: 107 KVPDRVYSLYNDFWVCTRCGNVYWVGSHW 135
>gi|393781320|ref|ZP_10369520.1| hypothetical protein HMPREF1071_00388 [Bacteroides salyersiae
CL02T12C01]
gi|392676904|gb|EIY70325.1| hypothetical protein HMPREF1071_00388 [Bacteroides salyersiae
CL02T12C01]
Length = 213
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 40/195 (20%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L ++G+D+E +P + + +V+LLQ++ SDE FL L+
Sbjct: 40 LQAQQILGIDSETRPSFTKGQSH-KVALLQIS----------SDE----CCFLFRLN--- 81
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQGCDIGFDRVEPYLDITSIYN 146
+ + + L L +P+I+K+G + D + L + F QGC D V P+
Sbjct: 82 MTGLTQSLIGLLENPEIIKVGLSLRDDFMMLHKRAPFNQQGCIELQDFVRPF-------- 133
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ KSL I L +SK + S+W LT+ QK YAA DA +
Sbjct: 134 -----------GIQDKSLQKIYGILFKEKISKSQRLSNWEADVLTDAQKQYAATDAWACL 182
Query: 207 EIFNIFQVKVAQKGN 221
I+N Q ++ + GN
Sbjct: 183 NIYNRLQ-ELKRTGN 196
>gi|302866117|ref|YP_003834754.1| 3'-5' exonuclease [Micromonospora aurantiaca ATCC 27029]
gi|315502675|ref|YP_004081562.1| 3'-5' exonuclease [Micromonospora sp. L5]
gi|302568976|gb|ADL45178.1| 3'-5' exonuclease [Micromonospora aurantiaca ATCC 27029]
gi|315409294|gb|ADU07411.1| 3'-5' exonuclease [Micromonospora sp. L5]
Length = 439
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + ++LL SL K +DWS+RPL E YAA+D L+++ + ++ ++
Sbjct: 162 ERVGLAALTEQLLGFSLEKHHSAADWSSRPLPESWLTYAALDVELLVDLRDSLDEELQRQ 221
Query: 220 GNSCSSISELDS 231
G S + E D+
Sbjct: 222 GKSGWAAEEFDA 233
>gi|116747862|ref|YP_844549.1| 3'-5' exonuclease [Syntrophobacter fumaroxidans MPOB]
gi|116696926|gb|ABK16114.1| 3'-5' exonuclease [Syntrophobacter fumaroxidans MPOB]
Length = 295
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 14 VTSTESP-EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
V E P E L R LS + + +D E S + F RV L+Q++ +PE D
Sbjct: 4 VVVIEKPSELDALVRQLSTARHLAVDTE---SNSFYAYFDRVCLIQIS-------SPERD 53
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
+++D S+ S+ L LF +P I K+ D++ L F
Sbjct: 54 -------YIIDPLSLKDLSV---LGRLFENPRIEKVLHAASNDVLGLRRDFQF------- 96
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
R D L +KQLG L+ I + +SL+K Q DW RPL
Sbjct: 97 -RFNGLFDTAIACKLLGYKQLG---------LSKILETHFGVSLNKRWQRYDWGKRPLVP 146
Query: 193 EQKNYAAIDAHCLIEI 208
+Q +YA +D H LI +
Sbjct: 147 DQLDYARLDTHYLIAL 162
>gi|402586210|gb|EJW80148.1| hypothetical protein WUBG_08943, partial [Wuchereria bancrofti]
Length = 483
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 78 VVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF------------- 123
+V ++ L ++ W K LF +KLGF F DL L ++F
Sbjct: 14 LVDVITLENVLTEEQWTRFFKALFSYSTAIKLGFDFLNDLKVLRASFPYLQPLEEMKNVI 73
Query: 124 CSQGCDIGFDRVEP-YLDITSIYN---HLHHKQLGRKLPKETKS--LANICKELLDISLS 177
C P +LD + N + L + ET L ++C+++L +L
Sbjct: 74 CILKLVKSLLASNPAFLDFSHSTNLPLSTETENLLDIVSDETVHFRLTDLCQKVLGQALD 133
Query: 178 KELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
K Q +W+ RPL EQ YAA+D +CL+ ++N +++ + N
Sbjct: 134 KTEQIGNWAMRPLRREQMKYAAMDGYCLLNLYNKLKIRAERDYN 177
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 21/175 (12%)
Query: 310 DKAPKTSKKKGRKRSSVIVDSREKRLDD-IGDWQGP-PPWDLSLGGDGYPKFLCDVMVEG 367
+K K +KKKG K + +R++ + + Q P DL K + D M+ G
Sbjct: 197 NKVEKRTKKKGAKFDEKEFEQMIERVNSGLNNSQVKRKPKDL--------KVIVDSMILG 248
Query: 368 LAKHLRCVGIDAATPRSK-------KPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQ 420
L KHLR GID ++ + +P I K L R +LLR + + +
Sbjct: 249 LGKHLRRCGIDTILAETRSYLIECAERDPNRYIITCGKAVDEL--RRHRLLRGTHRVLS- 305
Query: 421 IYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGR-FIQKPLSTEEAVEAA 474
I +++ QQ+ ++ F + +S D + SRC KCN F+ P EA+ A
Sbjct: 306 IPTAQNISIIQQIEFILRQFNIYLSNDDIFSRCMKCNSNSFVVAPSPVLEAMYQA 360
>gi|371775971|ref|ZP_09482293.1| 3'-5' exonuclease [Anaerophaga sp. HS1]
Length = 195
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 42/202 (20%)
Query: 13 LVTSTESP-EFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFNPE 70
++ E+P + +A L + ++G D E KP + SN +SLLQL+ +
Sbjct: 22 VINVIENPLQADAIAEKLQKEKIIGFDTETKPSFKKGVSN--NISLLQLSTE-------- 71
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQGC 128
+ +F L+++ L L +P I K+G + DL L F +G
Sbjct: 72 ----EEAFLFRLNITGFNGE-----LTRLLSNPKIKKIGVGIRDDLRGLQRLKKFTPKG- 121
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
++DI ++L K E SL ++ LL I +SK + S+W
Sbjct: 122 ---------FVDI---------QELAPKYGIEVLSLKSLAGLLLGIRISKRQRLSNWEAD 163
Query: 189 PLTEEQKNYAAIDAHCLIEIFN 210
L+E QK YAA DA ++I+N
Sbjct: 164 ALSEGQKLYAATDAWAALKIYN 185
>gi|255085362|ref|XP_002505112.1| predicted protein [Micromonas sp. RCC299]
gi|226520381|gb|ACO66370.1| predicted protein [Micromonas sp. RCC299]
Length = 514
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 80/197 (40%), Gaps = 48/197 (24%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS-- 91
LVGLD E +P R P V+L+Q+ P++ + V+ S P P+
Sbjct: 107 LVGLDVEARPSRVKGVTHP-VALVQVT-------TPDNRGCLLAHVYGAMGLSPPTPNRP 158
Query: 92 ---------IWELLKELFVSPDILKLGFKFKQDLIYLSSTF------------CSQGCDI 130
LL L P++L +G +DL ++ F GC
Sbjct: 159 YVPGSAVTKFPPLLARLLHDPNVLPVGQGVAEDLRQIARCFPEVTNPGVPKGGAEPGCRR 218
Query: 131 GFDRVEPYLDITSI--YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
G ++D+ SI + + LGR LA C D+S K +Q SDWS
Sbjct: 219 GA-----FVDLASIVDFYDVPASGLGR--------LAQHCG-FSDVSKPKSVQVSDWSRT 264
Query: 189 PLTEEQKNYAAIDAHCL 205
PLT+ Q YAA DA CL
Sbjct: 265 PLTDAQVRYAAQDA-CL 280
>gi|28278907|gb|AAH45429.1| Zgc:55695 protein [Danio rerio]
Length = 500
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 20/161 (12%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F L
Sbjct: 336 FIID--TLELRSEMYILNETFTDPAIVKVFHGADSDIEWLQKDFG--------------L 379
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ ++++ HH R L SL ++ K D+S K Q +DW RPL +E YA
Sbjct: 380 YVVNMFD-THHA--ARCLNLGRNSLDHLLKVYCDVSSDKRYQLADWRIRPLPDEMLKYAQ 436
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSS-ISELDSSNLDLGLK 239
D H L+ +++ + + GN ++ I ++ + + DL LK
Sbjct: 437 ADTHYLLYVYDRVRADLFDGGNGQATLIQQVWTKSRDLSLK 477
>gi|394989346|ref|ZP_10382180.1| hypothetical protein SCD_01766 [Sulfuricella denitrificans skB26]
gi|393791765|dbj|GAB71819.1| hypothetical protein SCD_01766 [Sulfuricella denitrificans skB26]
Length = 166
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 357 PKFLCDVMVEGLAKHLRCVGID---AATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
P+FLCDVM+ LA++LR G+D AA + RE ID E R LLT D K+ H
Sbjct: 5 PRFLCDVMLARLARYLRAAGLDTTLAAETATDAQILREAID----EGRWLLTADRKITEH 60
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKIS-EDQLMSRCTKCNGRFIQKPLSTEEAVE 472
+ K + ++ + L + + Q I +RC N +P + E A++
Sbjct: 61 K-AAKGHVLQLP--FGSFDLQAAVLSGQFNIDWLSHAFTRCLMDNTPL--QPATAEHALQ 115
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
+P+ + C +C ++YW G+ Y +K
Sbjct: 116 -------VPEDARQPVEELLVCPNCGRVYWRGSHYKRMRKKL 150
>gi|115350280|ref|YP_772119.1| hypothetical protein Bamb_0225 [Burkholderia ambifaria AMMD]
gi|115280268|gb|ABI85785.1| protein of unknown function DUF82 [Burkholderia ambifaria AMMD]
Length = 268
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA+ LR G D + + EL+ ++E R++LTRD +LL+ + ++
Sbjct: 94 RFIADAHLGGLAQLLRLAGFDTCYDNHYRDD--ELVALAAREGRIVLTRDRELLKRRAVV 151
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ + + QL E+ L + C +CN + A++AA
Sbjct: 152 RGCYLHAQQ--PDAQLHELFARLDLA-PHMRPFRLCLRCN--------APLHALDAADAA 200
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + ++ +F C C +++WEG+ +
Sbjct: 201 PRVPAGVRQRHRRFAACDVCRRVFWEGSHW 230
>gi|390937080|ref|YP_006394639.1| 3'-5' exonuclease [Bifidobacterium bifidum BGN4]
gi|389890693|gb|AFL04760.1| 3'-5' exonuclease [Bifidobacterium bifidum BGN4]
Length = 456
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ Q ++ +G
Sbjct: 160 GLAAVTEHYLGVTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELRRKMQRELKSQGKD 219
Query: 223 CSSISELDSSNLDLGLKGILEKP 245
+ E + L G+ E P
Sbjct: 220 GWADEEFRYA-LQTGMGPRREHP 241
>gi|379755419|ref|YP_005344091.1| ribonuclease D [Mycobacterium intracellulare MOTT-02]
gi|378805635|gb|AFC49770.1| ribonuclease D [Mycobacterium intracellulare MOTT-02]
Length = 430
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 140 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 199
Query: 214 VKVAQKGNSCSSISELD 230
+A +G + + E D
Sbjct: 200 EVLAGQGKTDWAAQEFD 216
>gi|380801577|gb|AFE72664.1| putative exonuclease mut-7 homolog, partial [Macaca mulatta]
Length = 245
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 361 CDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKL--LRHQYLIK 418
CD M++GLA+ LRC+G+DA + R + +E R++LT LR Q
Sbjct: 11 CDNMLQGLARSLRCLGVDARM-LGNGDDHRRAAEVARQEGRIILTSGQPFHKLRAQVGAG 69
Query: 419 NQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCN 457
+ SL QQ V++ F ++++ + SRC CN
Sbjct: 70 RCLSVDCSLKAQQQAKAVLKHFNVRVTHADIFSRCQACN 108
>gi|376297792|ref|YP_005169022.1| 3'-5' exonuclease [Desulfovibrio desulfuricans ND132]
gi|323460354|gb|EGB16219.1| 3'-5' exonuclease [Desulfovibrio desulfuricans ND132]
Length = 204
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 39/199 (19%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
LV TES + + SSL+G D E +P SLLQLA
Sbjct: 34 LVVRTES-DLEQALSGMRASSLLGFDTETRPVFKKGKKPGPPSLLQLA------------ 80
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
A ++ L +PL + + ++ + ILK G + D++ L
Sbjct: 81 --TAECAYVFQLGVLPLD---KGVCDILANRRILKTGVAVRDDILGLQK----------H 125
Query: 133 DRVEP--YLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
R +P ++D++SI K +T L N+ LL +SK QCS+W+ L
Sbjct: 126 ARFKPSGFVDLSSITA---------KYNLQTHGLRNMAANLLGFRISKSAQCSNWAKDKL 176
Query: 191 TEEQKNYAAIDAHCLIEIF 209
+ +Q YAA DA E++
Sbjct: 177 SRQQVLYAATDAWISRELY 195
>gi|379762965|ref|YP_005349362.1| ribonuclease D [Mycobacterium intracellulare MOTT-64]
gi|387876792|ref|YP_006307096.1| 3'-5' exonuclease [Mycobacterium sp. MOTT36Y]
gi|406031657|ref|YP_006730548.1| ribonuclease D [Mycobacterium indicus pranii MTCC 9506]
gi|443306584|ref|ZP_21036372.1| 3'-5' exonuclease [Mycobacterium sp. H4Y]
gi|378810907|gb|AFC55041.1| ribonuclease D [Mycobacterium intracellulare MOTT-64]
gi|386790250|gb|AFJ36369.1| 3'-5' exonuclease [Mycobacterium sp. MOTT36Y]
gi|405130204|gb|AFS15459.1| Ribonuclease D [Mycobacterium indicus pranii MTCC 9506]
gi|442768148|gb|ELR86142.1| 3'-5' exonuclease [Mycobacterium sp. H4Y]
Length = 430
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 140 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 199
Query: 214 VKVAQKGNSCSSISELD 230
+A +G + + E D
Sbjct: 200 EVLAGQGKTDWAAQEFD 216
>gi|226366248|ref|YP_002784031.1| ribonuclease [Rhodococcus opacus B4]
gi|226244738|dbj|BAH55086.1| putative ribonuclease [Rhodococcus opacus B4]
Length = 428
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L L K +DWS RPL + NYAA+D L+E+ N
Sbjct: 136 GRLAGFERVGLAAIVERTLGFELRKGHGAADWSKRPLPDTWLNYAALDVEVLVELRNAMA 195
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++ ++G S + E + L
Sbjct: 196 AELGEQGKSDWAAQEFEHIRL 216
>gi|154150301|ref|YP_001403919.1| hypothetical protein Mboo_0758 [Methanoregula boonei 6A8]
gi|153998853|gb|ABS55276.1| protein of unknown function DUF82 [Methanoregula boonei 6A8]
Length = 161
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 20/166 (12%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRS----KKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
+FL D M+ L ++LR +G D + E L++ + R+LLTRD +L R
Sbjct: 8 RFLADRMLGTLTRYLRFMGYDTVSANGFAAGNPDEDTRLLELAGNDHRILLTRDHELARR 67
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL-MSRCTKCNGRFIQKPLSTEEAVE 472
I L + QQLL+ L + E +L +SRC+ CN + +TE +
Sbjct: 68 GGDSAVLIVEGDVLAQVQQLLD------LGLVEPRLPLSRCSLCNSVLRE---ATESEIA 118
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVC 518
+A+ P F+ C C +LYW G+ + +++ I+ C
Sbjct: 119 SAR---YAPHA--RTGYSFFWCDRCRKLYWNGSHGRH-IRERIESC 158
>gi|374365116|ref|ZP_09623210.1| hypothetical protein OR16_03357 [Cupriavidus basilensis OR16]
gi|373103352|gb|EHP44379.1| hypothetical protein OR16_03357 [Cupriavidus basilensis OR16]
Length = 225
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D E I +E R++LTRD +LL+ + +
Sbjct: 72 RFVADAHLGGLAHLLRLTGFDTLYDNHYADSEIEAI--AMREGRIVLTRDRELLKRRG-V 128
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V+++ QL E+ L S + S C CN PL A++ +
Sbjct: 129 THGCY-VRAIKATPQLREIFARLDLARSA-RPFSLCLDCN-----VPL---RAIDKTEVD 178
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
R+P + + +F C C +++WEG+ + +
Sbjct: 179 GRVPPGVLARQERFVTCGCCQRVFWEGSHWRH 210
>gi|398944018|ref|ZP_10671019.1| hypothetical protein PMI27_04864 [Pseudomonas sp. GM41(2012)]
gi|398158721|gb|EJM47061.1| hypothetical protein PMI27_04864 [Pseudomonas sp. GM41(2012)]
Length = 246
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + +++ R++LTRD +LL+ + +I
Sbjct: 97 RFVADAHLGGLASLLRMSGFD--TLYDNGFEDGEIAEIAAQQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y + +L + QL E+ E L S + S C CN PL E + E A+
Sbjct: 154 SHGCY-LHALKPSLQLRELYERLDLARSA-RPFSLCLHCN-----LPLH-EISTELARA- 204
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P + F +C C ++YWEG+ +
Sbjct: 205 -QVPPRVGALYSHFLRCDACQRIYWEGSHW 233
>gi|254877166|ref|ZP_05249876.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254843187|gb|EET21601.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 364
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 42/193 (21%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+Q+A +
Sbjct: 6 NKQLNNVIEILKSTSQIAVDTEFYWMRTY---YPELCLVQIATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LK++F +I K+ D+ + F C++
Sbjct: 49 IFLIDTLEDLDFSK----LKDIFEDTNIQKIIHSATNDIPIIKRFF---DCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKL--PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + K++LDI + KE Q SDW RPL+++Q
Sbjct: 95 --------NNIFDTQLAASFLGTQSQISLKALLKDILDIEMEKESQFSDWRKRPLSQKQF 146
Query: 196 NYAAIDAHCLIEI 208
+YA D LIEI
Sbjct: 147 DYALKDVEHLIEI 159
>gi|340725346|ref|XP_003401032.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Bombus terrestris]
Length = 613
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 40/190 (21%)
Query: 32 SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
+ ++G D EW +N VSLLQLA FN V L + I
Sbjct: 83 NDVLGFDCEW-------ANEGPVSLLQLA-----TFN--------GVCGLFRIGKIGY-- 120
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I + LK+L + DILK+G +D + + + GC RV +D+ ++ +
Sbjct: 121 IPQKLKDLLANKDILKVGVASYEDGQKILADY---GC-----RVSSTIDLRTLAARV--- 169
Query: 152 QLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
KLP +SLA + + L + + K E++CS+W LT+EQ YAA DA + I+
Sbjct: 170 ----KLP-SPQSLAAMSLQYLGLEMDKLIEIRCSNWDAGTLTDEQVAYAACDAIASVLIY 224
Query: 210 NIFQVKVAQK 219
+ K+ +K
Sbjct: 225 DQITQKMKEK 234
>gi|383457201|ref|YP_005371190.1| ATP-dependent helicase [Corallococcus coralloides DSM 2259]
gi|380733211|gb|AFE09213.1| ATP-dependent helicase [Corallococcus coralloides DSM 2259]
Length = 917
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
SLA +C+ L I L K Q S+WS RPL +Q +YAA+DA L+ +++ F+
Sbjct: 855 SLAMVCERELGIVLDKSSQTSNWSRRPLEADQLSYAALDAEILLALYDRFK 905
>gi|331005546|ref|ZP_08328920.1| Ribonuclease D [gamma proteobacterium IMCC1989]
gi|330420648|gb|EGG94940.1| Ribonuclease D [gamma proteobacterium IMCC1989]
Length = 383
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 40/200 (20%)
Query: 22 FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFL 81
L ++LS S + LD E+ R++ +P + LLQ+A + G V+L
Sbjct: 27 LADLCQSLSTQSAIALDTEFVRTRTY---YPHIGLLQIADENG--------------VYL 69
Query: 82 LDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
+D +I S + + ++ +P I+K+ +DL F V P
Sbjct: 70 IDPLAI---SDTQPMADVLQNPAIVKVVHACSEDLEVFQYAFG----------VLP---- 112
Query: 142 TSIYNHLHHKQLGRKLPKETKSL--ANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
L Q+ S+ AN+ +E+ I + K+ SDW RPL++ Q YAA
Sbjct: 113 ----ESLFDTQVAAGFAGYGSSIGYANLLREIKRIDIPKQETRSDWLQRPLSDAQLRYAA 168
Query: 200 IDAHCLIEIFNIFQVKVAQK 219
+D L+EI+ K+ Q+
Sbjct: 169 LDVEYLLEIYRGLVEKLQQQ 188
>gi|172059298|ref|YP_001806950.1| hypothetical protein BamMC406_0233 [Burkholderia ambifaria MC40-6]
gi|171991815|gb|ACB62734.1| protein of unknown function DUF82 [Burkholderia ambifaria MC40-6]
Length = 255
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA+ LR G D + + EL+ ++E R++LTRD +LL+ + ++
Sbjct: 93 RFVADAHLGGLAQLLRLAGFDTCYDNHYRDD--ELVALAAREGRIVLTRDRELLKRRAVV 150
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ + + QL E+ L + C +CN + A++AA
Sbjct: 151 RGCYLHAQQ--PDAQLHELFARLDLA-PHMRPFRLCLRCN--------APLHALDAADAA 199
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + ++ +F C C +++WEG+ +
Sbjct: 200 PRVPAGVRQRHRRFAACDVCRRVFWEGSHW 229
>gi|11499026|ref|NP_070260.1| hypothetical protein AF1431 [Archaeoglobus fulgidus DSM 4304]
gi|2649142|gb|AAB89819.1| predicted coding region AF_1431 [Archaeoglobus fulgidus DSM 4304]
Length = 159
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEK-RVLLTRDAKLLRHQYL 416
KFL D M+ L + LR G D + + + E + R+LLT+D +L R
Sbjct: 5 KFLTDRMLGRLTRWLRISGYDTVSVSELEFDEEEDEFMLRNLRDRILLTKDRELYRKSVK 64
Query: 417 IKNQIYRVKSLLKNQQLLEVIE---AFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
+ ++S Q+ E++E FQ+ +M RC+ CN ++KP S EEA+E
Sbjct: 65 EGRKAILIRSDSLEGQMRELMERGVKFQI------VMDRCSLCNTP-LRKP-SREEAMEV 116
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
+ + D L + W C C +LYW G + N +
Sbjct: 117 IEREKLSEDML---EFELWYCEKCRKLYWMGGHWKNMTR 152
>gi|18976975|ref|NP_578332.1| hypothetical protein PF0603 [Pyrococcus furiosus DSM 3638]
gi|18892601|gb|AAL80727.1| hypothetical protein PF0603 [Pyrococcus furiosus DSM 3638]
Length = 148
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 364 MVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYR 423
M+ LA+ LR G D + E++ +E R++LTRD +L R + Q+
Sbjct: 1 MLGRLARWLRLYGYDTLYGIE---DDNEILRIAEEEGRIILTRDVELYR-----QAQVRN 52
Query: 424 VKSLLKNQQLLE--VIEAFQLKISEDQLM---SRCTKCNGRFIQKPLSTEEAVEAAKGFQ 478
++++L E V + ++ +L +RC KCNG + + EE KG
Sbjct: 53 LRAILITSNSFEEQVKQLMMERVEFSELFPENARCPKCNG--VIRSAKKEEV----KG-- 104
Query: 479 RIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQ 512
++P+ +++ +F+ C C Q+YW G Q+ ++
Sbjct: 105 KVPENVYNSYNEFYICTSCGQIYWPGRQWREMLK 138
>gi|351715433|gb|EHB18352.1| Werner syndrome ATP-dependent helicase [Heterocephalus glaber]
Length = 1411
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS ++G D EW P ++ RV+L+QL ES + + +
Sbjct: 69 ISMSLSAGDVIGFDMEWPPIY-NKGKLSRVALVQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENETIKKAGVGIEGDQWKLLRDF-----DI---KLKSFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL E SL + K L L K ++CS+WS PL+E+QK YAA D
Sbjct: 165 AN--------QKLKCMEIWSLNGLVKHLFGKQLLKDKSIRCSNWSIFPLSEDQKLYAATD 216
Query: 202 AHCLIEIF 209
A+ + I+
Sbjct: 217 AYAGLIIY 224
>gi|254821715|ref|ZP_05226716.1| ribonuclease D [Mycobacterium intracellulare ATCC 13950]
gi|379748128|ref|YP_005338949.1| ribonuclease D [Mycobacterium intracellulare ATCC 13950]
gi|378800492|gb|AFC44628.1| ribonuclease D [Mycobacterium intracellulare ATCC 13950]
Length = 430
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 140 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 199
Query: 214 VKVAQKGNSCSSISELD 230
+A +G + + E D
Sbjct: 200 EVLAGQGKTDWAAQEFD 216
>gi|342880534|gb|EGU81622.1| hypothetical protein FOXB_07858 [Fusarium oxysporum Fo5176]
Length = 860
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L ++F P+++K+ D+++L D+G V D LH+
Sbjct: 309 EVLNQVFTDPNVVKVFHGAYMDMVWLQR-------DLGL-YVNGLFDTFFACEQLHYP-- 358
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
KSLA + + +D K+ Q +DW RPL EE YA D H L+ I++
Sbjct: 359 -------AKSLAYLLSKFVDFDADKQYQLADWRIRPLPEEMMYYARSDTHYLLYIYD 408
>gi|268324031|emb|CBH37619.1| conserved hypothetical protein, DUF82 family [uncultured archaeon]
Length = 179
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE----LIDQTSKEKRVLLTRDAKLLRH 413
+F+ D M+ L+ LR +G D K E E L E R+LLTRD L
Sbjct: 19 RFVTDRMLGKLSTWLRILGYDTIYAAEVKGECVEEDESLAALAEHEARILLTRDKILAAS 78
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEA 473
Q +K+ QL E++ + ++ + + RC+ CNGR + EE +
Sbjct: 79 AKRRGVQCVHIKTGEVMGQLKELLCHYP-NLNLEPVSIRCSLCNGRLRKVREEEEEDMLR 137
Query: 474 AKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKF 514
K + +P + + FW C C ++YWEG+ + N ++
Sbjct: 138 EKSY--VPTSMIGE-CDFWICNRCGRIYWEGSHWRNMRERL 175
>gi|261855126|ref|YP_003262409.1| ribonuclease D [Halothiobacillus neapolitanus c2]
gi|261835595|gb|ACX95362.1| ribonuclease D [Halothiobacillus neapolitanus c2]
Length = 374
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 50/243 (20%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
+++S+ +D E+ + ++ FP++ L+Q+A P++ ++L+D ++P
Sbjct: 29 IAESTWATIDTEFMRESTY---FPQLCLVQIAT-------PDA-------IWLIDPLAVP 71
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
L +W L SP + +QDL + YLD ++ L
Sbjct: 72 LAPLWHELNRT-SSPLVFHAA---EQDLELI------------------YLDSGALPQTL 109
Query: 149 HHKQLGRKLPK--ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
Q+ E AN+ LL + L K ++W+ RPLT EQ++YAA D L
Sbjct: 110 RDSQIAAAFLGLGEQIGYANLVNRLLHVELDKSQSRTNWAQRPLTAEQQHYAADDVRFLR 169
Query: 207 EIFNIFQVKVAQKG------NSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEAL 260
++ + + ++A K C+++S D + G+ K G + +R L
Sbjct: 170 SMYPLLREQLATKNRLAWFDEECAALS--DPQRFQPQMTGLWRKVR-GQQALRAAQRAVL 226
Query: 261 DII 263
D I
Sbjct: 227 DAI 229
>gi|406861057|gb|EKD14113.1| 3 -5 exonuclease helicase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1248
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 53/233 (22%)
Query: 1 MDCTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
++ Y P ++H S ++ E L + + ++G D EWK ++ ++ +VSL+Q+A
Sbjct: 291 VNGRYDSP-RVHYCKSLQTSEKA-LKEHFTDAKVIGFDIEWK-EKGLRTARDQVSLVQIA 347
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPS------IWELLKELFVSPDILKLGFKFKQ 114
+ S + L+ +++ P+ + LK++ P I+K+G K
Sbjct: 348 SE--------------SRIALMHVAAFPVKDGVRKDLVPPTLKKIMEDPSIIKVGVAIKG 393
Query: 115 DLIYLSSTFCSQGCDIGFDRVEPYLDITSI----YNHLHH-------KQLGRKLPKETKS 163
D C+ RV+ +L I S +HL+ K+ + + S
Sbjct: 394 D--------CT--------RVKRWLGIDSRSLIELSHLYKLVKFSRSKEFA-SINRTLVS 436
Query: 164 LANICKELLDISLSK-ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
LA KE L + + K E++ SDW +PLT EQ YAA D++ +++++ ++K
Sbjct: 437 LATQTKEHLHLPMFKGEVRISDW-RQPLTMEQVQYAASDSYAGLQLYHTLEMK 488
>gi|358394505|gb|EHK43898.1| hypothetical protein TRIATDRAFT_172602, partial [Trichoderma
atroviride IMI 206040]
Length = 816
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+++L D+G V D + LH+
Sbjct: 286 QVLNEVFADPTIVKVFHGAYMDMVWLQR-------DLGL-YVNGLFDTFFASDALHYS-- 335
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
++SLA + + ++ K Q +DW RPL+EE YA D H L+ I++ +
Sbjct: 336 -------SRSLAFLLSKFVNFDADKRYQLADWRIRPLSEEMMFYARSDTHYLLYIYDKIR 388
Query: 214 VKVAQKGNS 222
++ Q +S
Sbjct: 389 NELVQSSDS 397
>gi|306822549|ref|ZP_07455927.1| ribonuclease D [Bifidobacterium dentium ATCC 27679]
gi|304554094|gb|EFM42003.1| ribonuclease D [Bifidobacterium dentium ATCC 27679]
Length = 433
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 138 YLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ D+ +HL ++ R L LA + + L ++L+KE +DWS RPL + +N
Sbjct: 109 FADLGMEPHHLFDTEIAARLLGMHRFGLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRN 168
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKG 220
YAA+D LIE+ + ++ ++G
Sbjct: 169 YAALDVELLIELEQRMRTELKRQG 192
>gi|171742685|ref|ZP_02918492.1| hypothetical protein BIFDEN_01799 [Bifidobacterium dentium ATCC
27678]
gi|283456244|ref|YP_003360808.1| ribonuclease D [Bifidobacterium dentium Bd1]
gi|171278299|gb|EDT45960.1| 3'-5' exonuclease [Bifidobacterium dentium ATCC 27678]
gi|283102878|gb|ADB09984.1| Ribonuclease D [Bifidobacterium dentium Bd1]
Length = 433
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 138 YLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ D+ +HL ++ R L LA + + L ++L+KE +DWS RPL + +N
Sbjct: 109 FADLGMEPHHLFDTEIAARLLGMHRFGLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRN 168
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKG 220
YAA+D LIE+ + ++ ++G
Sbjct: 169 YAALDVELLIELEQRMRTELKRQG 192
>gi|221057512|ref|XP_002261264.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247269|emb|CAQ40669.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 738
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 162 KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
KSL ++C+++L L+K+LQ S+WS RPL E Q YAA DA+ LI
Sbjct: 656 KSLNHLCQQILGKKLNKQLQLSNWSRRPLMESQICYAATDAYVLI 700
>gi|254776017|ref|ZP_05217533.1| ribonuclease D [Mycobacterium avium subsp. avium ATCC 25291]
Length = 416
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 123 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 182
Query: 214 VKVAQKGNSCSSISELD 230
+A +G + + E D
Sbjct: 183 DVLAGQGKTDWAAQEFD 199
>gi|221121078|ref|XP_002157951.1| PREDICTED: exosome component 10-like [Hydra magnipapillata]
Length = 758
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
+ E+F P+ILK+ D+ +L F + N Q R
Sbjct: 305 INEIFSDPNILKVMHGADSDIGWLQRDFG-----------------VYVVNMFDTGQAAR 347
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L ++ SLA + + ++ K+ Q +DW RP+ +E YA D H L+ +++I + +
Sbjct: 348 TLHEDRFSLAYLLSKYCNVDAQKQYQLADWRIRPIPKEMILYAQEDTHYLLYVYDILRNQ 407
Query: 216 VAQKGNSCSSI 226
+ KGN+ ++
Sbjct: 408 LLNKGNANKNL 418
>gi|444432003|ref|ZP_21227163.1| putative ribonuclease [Gordonia soli NBRC 108243]
gi|443887177|dbj|GAC68884.1| putative ribonuclease [Gordonia soli NBRC 108243]
Length = 431
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + E L + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 144 GRLLGLPKVNLAAMVAEFLGLGLAKGHGAADWSRRPLPDDWLNYAALDVEVLVELRDAID 203
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFK 255
+ G + E + IL++P +T R++
Sbjct: 204 AALVDAGKDDWARQE---------FRHILDRPPTPPRTDRWR 236
>gi|242767043|ref|XP_002341292.1| exosome component 3'-5' exonuclease [Talaromyces stipitatus ATCC
10500]
gi|218724488|gb|EED23905.1| exosome complex exonuclease Rrp6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 771
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F P+ILK+ D+++L D+G L + S+++ +H +
Sbjct: 293 LNEVFTDPNILKVFHGSTMDIVWLQR-------DLG-------LYVVSLFD-TYHAAVAL 337
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
PK +SL + ++ K+ Q +DW RPLT+E YA D H L+ I++ + +
Sbjct: 338 GFPK--RSLKFLLEKYAHYEADKKYQMADWRLRPLTDEMLKYARADTHYLLYIYDCLRNE 395
Query: 216 VAQKGN 221
+ +K
Sbjct: 396 LLEKST 401
>gi|400536794|ref|ZP_10800328.1| ribonuclease D [Mycobacterium colombiense CECT 3035]
gi|400329807|gb|EJO87306.1| ribonuclease D [Mycobacterium colombiense CECT 3035]
Length = 431
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL L+K +DWS RPL E NYAA+D LIE+ +A++G +
Sbjct: 151 NLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIADVLAEQGKT 210
Query: 223 CSSISELD 230
+ E D
Sbjct: 211 DWAAQEFD 218
>gi|332670632|ref|YP_004453640.1| 3'-5' exonuclease [Cellulomonas fimi ATCC 484]
gi|332339670|gb|AEE46253.1| 3'-5' exonuclease [Cellulomonas fimi ATCC 484]
Length = 424
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 146 NHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+ +LG R L E LA + + L + L+KE DWS RPL +E YAA+D
Sbjct: 130 TRIFDTELGARLLGMERVGLAAVVADALGLGLAKEHSAVDWSTRPLPQEWLRYAALDVEV 189
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDS 231
L+ + + ++A G + + E ++
Sbjct: 190 LVPLREVLAERLAVAGKAEWAAQEFEA 216
>gi|452978276|gb|EME78040.1| hypothetical protein MYCFIDRAFT_107101, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 799
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F P+ILK+ D+I+L D+G L + +++ HH R
Sbjct: 294 LNEVFADPNILKVLHGAYMDIIWLQR-------DLG-------LYLVGLFD-THHA--AR 336
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L SLA + K + K+ Q +DW RPL + +YA D H L+ IF+ + +
Sbjct: 337 ALGYPAGSLAYLLKRFAGVDAQKKYQTADWRVRPLPQALFDYARSDTHYLLYIFDNLRNE 396
Query: 216 VAQKGN 221
+ Q+ +
Sbjct: 397 LIQRSD 402
>gi|398904377|ref|ZP_10652249.1| hypothetical protein PMI30_04149 [Pseudomonas sp. GM50]
gi|398176029|gb|EJM63765.1| hypothetical protein PMI30_04149 [Pseudomonas sp. GM50]
Length = 246
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + +++ R++LTRD +LL+ + +I
Sbjct: 97 RFVADAHLGGLANLLRMSGFD--TLYDNGFEDGEIAEIAAQQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL E+ E L S + S C CN PL E + E A+
Sbjct: 154 SHGCY-VHALKPSLQLRELYERLDLARSA-RPFSLCLHCN-----LPLH-EISPEQAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
++P + F +C C ++YWEG+ + +
Sbjct: 204 PQVPPRVGALYSHFLRCDACQRVYWEGSHWRS 235
>gi|309801464|ref|ZP_07695591.1| 3'-5' exonuclease [Bifidobacterium dentium JCVIHMP022]
gi|308221979|gb|EFO78264.1| 3'-5' exonuclease [Bifidobacterium dentium JCVIHMP022]
Length = 430
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 138 YLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ D+ +HL ++ R L LA + + L ++L+KE +DWS RPL + +N
Sbjct: 106 FADLGMEPHHLFDTEIAARLLGMHRFGLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRN 165
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKG 220
YAA+D LIE+ + ++ ++G
Sbjct: 166 YAALDVELLIELEQRMRTELKRQG 189
>gi|258406518|ref|YP_003199260.1| hypothetical protein Dret_2400 [Desulfohalobium retbaense DSM 5692]
gi|257798745|gb|ACV69682.1| protein of unknown function DUF82 [Desulfohalobium retbaense DSM
5692]
Length = 268
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+FL DV V LA+ LR +G DA L + + E+RV+L++D LL+ + ++
Sbjct: 92 RFLVDVNVAKLARMLRMLGFDALDDPDADDG--ALAARAAVEQRVVLSKDGGLLKRRSVV 149
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ R +QL EV+ F L SRC +CN E V AK
Sbjct: 150 WARYLRADH--PGEQLREVVRFFGLSRYSTPF-SRCLRCN----------EPLVPVAKA- 195
Query: 478 QRIPDCLFDKNLQFWQ----CMDCNQLYWEGTQYHNAVQKFI 515
I L K +++Q C C++LYW G+ +H +Q+++
Sbjct: 196 -DIVHRLLPKTKRYYQDFSRCPRCDRLYWRGS-HHAHMQRWL 235
>gi|167628093|ref|YP_001678593.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|167598094|gb|ABZ88092.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25017]
Length = 366
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 42/193 (21%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+Q+A +
Sbjct: 6 NKQLNNVIEILKSTSQIAVDTEFYWMRTY---YPELCLVQIATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LK++F +I K+ D+ + F C++
Sbjct: 49 IFLIDTLEDLDFSK----LKDIFEDTNIQKIIHSATNDIPIIKRFF---DCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKL--PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + K++LDI + KE Q SDW RPL+++Q
Sbjct: 95 --------NNIFDTQLAASFLGTQSQISLKALLKDILDIEMEKESQFSDWRKRPLSQKQF 146
Query: 196 NYAAIDAHCLIEI 208
+YA D LIEI
Sbjct: 147 DYALKDVKHLIEI 159
>gi|449522510|ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 935
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+++L F C++ FD Q R
Sbjct: 315 LREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNL-FDT----------------GQASR 357
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL + ++ +KE Q +DW RPL EE YA D H L+ I+++ ++K
Sbjct: 358 VLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMK 417
Query: 216 VA 217
+A
Sbjct: 418 LA 419
>gi|162147898|ref|YP_001602359.1| ribonuclease D [Gluconacetobacter diazotrophicus PAl 5]
gi|161786475|emb|CAP56057.1| putative ribonuclease D [Gluconacetobacter diazotrophicus PAl 5]
Length = 210
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA +C+ELL + LSK+ Q SDW LT EQK YAA D L ++ +V + ++
Sbjct: 117 ERHGLAQLCRELLGVDLSKQQQTSDWGAPELTPEQKAYAASDVLHLHALWTKLEVLLHRE 176
Query: 220 G 220
G
Sbjct: 177 G 177
>gi|449462768|ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 936
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+++L F C++ FD Q R
Sbjct: 315 LREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNL-FDT----------------GQASR 357
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL + ++ +KE Q +DW RPL EE YA D H L+ I+++ ++K
Sbjct: 358 VLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMK 417
Query: 216 VA 217
+A
Sbjct: 418 LA 419
>gi|294056543|ref|YP_003550201.1| 3'-5' exonuclease [Coraliomargarita akajimensis DSM 45221]
gi|293615876|gb|ADE56031.1| 3'-5' exonuclease [Coraliomargarita akajimensis DSM 45221]
Length = 211
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 41/202 (20%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+I L+ + E E + L +SS +G D E +P +P +L+QLA
Sbjct: 33 RIELLNTIE--EMEAVVPQLLKSSHLGFDTETRPTFKKGEYYP-PALIQLAT-------- 81
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSST--FCSQG 127
A V+L +S + LK + SP ILK G K+D+ L + F G
Sbjct: 82 ------ADCVYLFRISK---SETLQPLKAILESPQILKTGIGIKEDVRELRAMEDFQPSG 132
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
+L+IT +L KL E + L + LL+ +SK Q S+W+
Sbjct: 133 ----------FLEIT---------ELTLKLGYENRGLRPLTGLLLNGRISKAAQVSNWAR 173
Query: 188 RPLTEEQKNYAAIDAHCLIEIF 209
+ L ++Q YAA DA E++
Sbjct: 174 QELDQKQIRYAATDAWVSRELY 195
>gi|311748079|ref|ZP_07721864.1| 3'- 5' exonuclease domain protein [Algoriphagus sp. PR1]
gi|126574723|gb|EAZ79104.1| 3'- 5' exonuclease domain protein [Algoriphagus sp. PR1]
Length = 201
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 39/187 (20%)
Query: 26 ARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLS 85
A LS+ S++G D E KP + +V+LLQL S A+ FL L+
Sbjct: 36 AEFLSKQSIIGFDTETKPA-FRRGVINQVALLQL--------------STATQAFLFRLN 80
Query: 86 SI-PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP--YLDIT 142
I P + L+ + I+K+G D+ +G D P + D+
Sbjct: 81 EIGEFP---DSLRNILEKESIVKVGAAVHDDI---------KGLAKLTDSFFPLSFFDLN 128
Query: 143 SIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+ +G + N+C +L + +SK Q S+W LTE+Q+ YAA DA
Sbjct: 129 DELKKVGFHNVGVR---------NLCAMVLKMRISKSEQVSNWEAEVLTEKQQRYAATDA 179
Query: 203 HCLIEIF 209
+E+F
Sbjct: 180 WACLEVF 186
>gi|398857230|ref|ZP_10612932.1| hypothetical protein PMI36_00824 [Pseudomonas sp. GM79]
gi|398241277|gb|EJN26933.1| hypothetical protein PMI36_00824 [Pseudomonas sp. GM79]
Length = 246
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + +++ R++LTRD +LL+ + +I
Sbjct: 97 RFIADAHLGGLANLLRMSGFD--TLYDNGFEDGEIAEIAAQQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL E+ E L + + S C CN PL E + E A+
Sbjct: 154 SHGCY-VHALKPSLQLRELYERLDLARTA-RPFSLCLHCN-----LPLH-EISPEVAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
++P + F +C C ++YWEG+ + +
Sbjct: 204 LQVPPRVGALYSHFLRCEACQRVYWEGSHWRS 235
>gi|346973710|gb|EGY17162.1| hypothetical protein VDAG_00844 [Verticillium dahliae VdLs.17]
Length = 804
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F P I+K+ D+ +L D+G L I +++ ++
Sbjct: 280 EVLNEVFTDPKIVKVFHGAHMDMQWLQR-------DLG-------LYINGLFDTFFAAEI 325
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
L +SLA + K +D K+ Q +DW RPL EE YA D H L+ IF+
Sbjct: 326 ---LGYPQRSLAYLLKRFVDFDADKKYQMADWRIRPLPEEMFYYARSDTHYLLYIFD 379
>gi|326795603|ref|YP_004313423.1| ribonuclease D [Marinomonas mediterranea MMB-1]
gi|326546367|gb|ADZ91587.1| ribonuclease D [Marinomonas mediterranea MMB-1]
Length = 383
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 21/131 (16%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W LK+L V+ D++K+ CS+ D+ FDR+ + + + Q
Sbjct: 70 WAPLKDLMVNLDVMKVFHA------------CSEDLDV-FDRL-----LGVLPTPFYDTQ 111
Query: 153 LGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+G + + S + + L I ++K+ SDW+ RPLTE QK YAA+D L +++
Sbjct: 112 IGEAYANGQWSVSYVKLIQAYLSIEVAKDETRSDWTVRPLTEAQKRYAALDVVYLAKVYP 171
Query: 211 IFQVKVAQKGN 221
Q+++ QK N
Sbjct: 172 -QQIEMLQKKN 181
>gi|399000773|ref|ZP_10703495.1| hypothetical protein PMI21_02069 [Pseudomonas sp. GM18]
gi|398129123|gb|EJM18497.1| hypothetical protein PMI21_02069 [Pseudomonas sp. GM18]
Length = 246
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + +++ R++LTRD +LL+ + +I
Sbjct: 97 RFVADAHLGGLASLLRMSGFD--TLYDNGFEDAEIAEIAAQQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL E+ E L S + S C CN PL E + E A+
Sbjct: 154 SHGCY-VHALKPSLQLRELYERLDLARSA-RPFSLCLHCN-----LPLH-EISPELAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
++P + F +C C ++YWEG+ +
Sbjct: 204 PQVPPRVGVLYSHFLRCDACQRIYWEGSHWRG 235
>gi|296453936|ref|YP_003661079.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum JDM301]
gi|296183367|gb|ADH00249.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum JDM301]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETLMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|67537662|ref|XP_662605.1| hypothetical protein AN5001.2 [Aspergillus nidulans FGSC A4]
gi|40741889|gb|EAA61079.1| hypothetical protein AN5001.2 [Aspergillus nidulans FGSC A4]
gi|259482125|tpe|CBF76306.1| TPA: exosome complex exonuclease Rrp6, putative (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 1297
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P+ILKL D+I+L D+G L + +++ +H
Sbjct: 293 QMLNEVFADPNILKLFHGSSMDIIWLQR-------DLG-------LYVVGMFD-TYHAAC 337
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
PK KSL + + ++ K+ Q +DW RPL NYA D H L+ I++
Sbjct: 338 ALNYPK--KSLKYLLHKFVNFEADKQYQMADWRIRPLPSGMFNYARSDTHYLLYIYD 392
>gi|444314737|ref|XP_004178026.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
gi|387511065|emb|CCH58507.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
Length = 771
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+L E+F +P+I K+ D+I+L D+G L I S+++ H
Sbjct: 301 VLNEIFTNPNITKVFHGASMDIIWLQR-------DLG-------LYIVSLFDTFH---AS 343
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+ L SLA + + SK+ Q +DW RPLT YA D H L+ IF+
Sbjct: 344 KALGLARHSLAYLLENYASFKTSKKYQLADWRRRPLTNNMLAYARSDTHFLLNIFD 399
>gi|317482293|ref|ZP_07941314.1| 3'-5' exonuclease [Bifidobacterium sp. 12_1_47BFAA]
gi|316916309|gb|EFV37710.1| 3'-5' exonuclease [Bifidobacterium sp. 12_1_47BFAA]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|227546007|ref|ZP_03976056.1| ribonuclease D [Bifidobacterium longum subsp. longum ATCC 55813]
gi|239621937|ref|ZP_04664968.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|322688886|ref|YP_004208620.1| exonuclease [Bifidobacterium longum subsp. infantis 157F]
gi|322690861|ref|YP_004220431.1| exonuclease [Bifidobacterium longum subsp. longum JCM 1217]
gi|384201762|ref|YP_005587509.1| exonuclease [Bifidobacterium longum subsp. longum KACC 91563]
gi|227213641|gb|EEI81490.1| ribonuclease D [Bifidobacterium longum subsp. infantis ATCC 55813]
gi|239515128|gb|EEQ54995.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|320455717|dbj|BAJ66339.1| putative exonuclease [Bifidobacterium longum subsp. longum JCM
1217]
gi|320460222|dbj|BAJ70842.1| putative exonuclease [Bifidobacterium longum subsp. infantis 157F]
gi|338754769|gb|AEI97758.1| exonuclease [Bifidobacterium longum subsp. longum KACC 91563]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|46190415|ref|ZP_00206459.1| COG0349: Ribonuclease D [Bifidobacterium longum DJO10A]
gi|189439553|ref|YP_001954634.1| ribonuclease D [Bifidobacterium longum DJO10A]
gi|189427988|gb|ACD98136.1| Ribonuclease D [Bifidobacterium longum DJO10A]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|419849744|ref|ZP_14372771.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 35B]
gi|419851666|ref|ZP_14374588.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 2-2B]
gi|386411097|gb|EIJ25853.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 35B]
gi|386413096|gb|EIJ27721.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 2-2B]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|313205201|ref|YP_004043858.1| 3'-5' exonuclease [Paludibacter propionicigenes WB4]
gi|312444517|gb|ADQ80873.1| 3'-5' exonuclease [Paludibacter propionicigenes WB4]
Length = 231
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 39/183 (21%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +S +VG+D E KP + + + +VSL+Q+ S FL L+ I
Sbjct: 39 LRKSKVVGIDTETKPSFT-RGTYHKVSLVQI--------------STLDHCFLFRLNKID 83
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSS--TFCSQGCDIGFDRVEPYLDITSIYN 146
P+ L E +I K+G + DL L+ F C +DI +I
Sbjct: 84 FPAA---LAEFLSDENIKKIGLSLRDDLNGLNKHHAFKPANC----------VDIQTIVQ 130
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+LG L I L +SK + ++W N LTE+Q+ YAA DA +
Sbjct: 131 SYGILELG---------LQKIYAILFGKKISKSQRLTNWENPELTEQQQRYAATDAWASL 181
Query: 207 EIF 209
+I+
Sbjct: 182 QIY 184
>gi|82793580|ref|XP_728099.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484273|gb|EAA19664.1| Streptococcus pyogenes AMV256, putative [Plasmodium yoelii yoelii]
Length = 713
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 153 LGRKLPKET-KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
L +K+ K KSL ++C + L LSK+LQ S+W+ RPL++EQ YA +DA+ LI I
Sbjct: 620 LPKKINKHYFKSLNDLCFQFLRKKLSKKLQLSNWNKRPLSKEQIEYAGLDAYVLIPI 676
>gi|23465521|ref|NP_696124.1| hypothetical protein BL0948 [Bifidobacterium longum NCC2705]
gi|23326181|gb|AAN24760.1| narrowly conserved hypothetical protein [Bifidobacterium longum
NCC2705]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|296394326|ref|YP_003659210.1| 3'-5' exonuclease [Segniliparus rotundus DSM 44985]
gi|296181473|gb|ADG98379.1| 3'-5' exonuclease [Segniliparus rotundus DSM 44985]
Length = 470
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA + + LL + L+K +DWS RPL E NYAA+D LI +
Sbjct: 145 GRIAGFERVGLAALVEALLGVGLAKGHGAADWSQRPLPPEWLNYAALDVELLIPMREALL 204
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + ++ E +
Sbjct: 205 AVLAEQGKTQWALEEFE 221
>gi|449304144|gb|EMD00152.1| hypothetical protein BAUCODRAFT_366269 [Baudoinia compniacensis
UAMH 10762]
Length = 774
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F +P ILK+ D+I+L D+G YL + H + LG
Sbjct: 272 LNEVFANPSILKVLHGAYMDVIWLQR-------DLGL-----YL-VGLFDTHYACRALGY 318
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
SLA + K+ ++ K+ Q +DW RPL +E +YA D H L+ IF+ + +
Sbjct: 319 A----GASLAFLLKKFANVDAQKQYQTADWRIRPLPQELLDYARSDTHYLLYIFDNMRNE 374
Query: 216 VAQKGN 221
+ Q+
Sbjct: 375 LVQRST 380
>gi|294955496|ref|XP_002788534.1| hypothetical protein Pmar_PMAR010065 [Perkinsus marinus ATCC 50983]
gi|239904075|gb|EER20330.1| hypothetical protein Pmar_PMAR010065 [Perkinsus marinus ATCC 50983]
Length = 663
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 53/190 (27%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
EF R +SQ +G+D EW S+ P +L Q+A + V+
Sbjct: 506 EFDDCVRDISQYRTIGIDVEW-------SSGPGAALFQVASE--------------DTVY 544
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILK--LGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
L+D+ +P I + LF + ++ LGF DL + D+ D+
Sbjct: 545 LIDML---VPEIRQS-STLFSTLRRVRRVLGFSISADLERIPQLKECGVIDVQVDKR--- 597
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
S+ H+ QLG L K QCS+W++RPL+E QKNYA
Sbjct: 598 ---GSLQRHVA-GQLGAYLDKTE-------------------QCSEWADRPLSESQKNYA 634
Query: 199 AIDAHCLIEI 208
A+DA+ L+ +
Sbjct: 635 ALDAYTLLAL 644
>gi|395541837|ref|XP_003772843.1| PREDICTED: Werner syndrome ATP-dependent helicase [Sarcophilus
harrisii]
Length = 1448
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 40/204 (19%)
Query: 13 LVTSTESPEFTHLAR----ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
++ S E+ + + LA L+ ++VG D EW P + +V+L+QL
Sbjct: 49 IIYSYEASDCSFLAEDIRMNLTDGAVVGFDIEWPPP-FWKGKSGKVALVQLCVS------ 101
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
ES + + +S P + LK L + + K G L
Sbjct: 102 ----ESKCYLFHVASMSVFP-----QGLKMLLENEAVKKAGMGIADQWKLLRD------- 145
Query: 129 DIGFD-RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDW 185
FD ++ ++++ S+ N + KET SL ++ K L L KE L+CS W
Sbjct: 146 ---FDIHLKSFVELASMANE-------KLRCKETWSLDSLVKHLFSKRLLKEQSLRCSRW 195
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIF 209
+ PLTE+QK YAAIDA+ + ++
Sbjct: 196 EDFPLTEDQKQYAAIDAYASLIVY 219
>gi|393907978|gb|EJD74851.1| 3'-5' exonuclease [Loa loa]
Length = 728
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 157 LPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L KE + L+ +CK +L L K QCS W RPL + Q YAA+DA+C++ ++
Sbjct: 641 LLKEIRGLSALCKRVLGKPLDKTEQCSVWDRRPLRDLQLRYAALDAYCMLMLY 693
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
VG+DAEW S ++ + ++LQLA +F++D+ I +
Sbjct: 439 VGVDAEW----SSYVSYSKATILQLAIPYH--------------IFIIDVDEIKSDILVV 480
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSST 122
++LFV +LK+G++F +DLI L S
Sbjct: 481 FFEKLFVEWKLLKIGYQFDEDLIQLRSA 508
>gi|392545413|ref|ZP_10292550.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
rubra ATCC 29570]
Length = 377
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
AN+ K +LD+ L K + +DW RPL Q YAA D L+ + K+A+KG S
Sbjct: 117 GFANMVKMMLDVELDKSMSRTDWLKRPLQASQLEYAAADVFYLLPCYESLSKKIAEKGLS 176
Query: 223 CSSISE 228
ISE
Sbjct: 177 DIVISE 182
>gi|213692580|ref|YP_002323166.1| 3'-5' exonuclease [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|384199780|ref|YP_005585523.1| putative exonuclease [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|213524041|gb|ACJ52788.1| 3'-5' exonuclease [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|320458732|dbj|BAJ69353.1| putative exonuclease [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETLMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|359481017|ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis vinifera]
Length = 931
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 24/138 (17%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+I+L F C++ FD Q R
Sbjct: 311 LREVFKDPTKKKVMHGADRDIIWLQRDFGIYICNM-FDT----------------GQASR 353
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ ++ +KE Q DW RPL E YA D H L+ I+++ + +
Sbjct: 354 VLKLERNSLEHLLHHYCGVTANKEYQNGDWRLRPLPHEMLRYAREDTHYLLHIYDLMRTQ 413
Query: 216 VAQKGNSCSSISELDSSN 233
+ S++EL++SN
Sbjct: 414 LL-------SMAELENSN 424
>gi|253698875|ref|YP_003020064.1| 3'-5' exonuclease [Geobacter sp. M21]
gi|251773725|gb|ACT16306.1| 3'-5' exonuclease [Geobacter sp. M21]
Length = 377
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 41/214 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P HLVT ++ L LS+ S++ D E + +V L+Q+
Sbjct: 10 PAAAHLVTDQKT--LDELVERLSRESVLAFDLEADSLHHYTE---KVCLIQV-------- 56
Query: 68 NPESDESNASVVFLLDLSSIPLPSI-WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ 126
S+AS L+D PL I ++L +F +P I K+ D+ L F
Sbjct: 57 ------SSASEDRLID----PLAPIDVKVLAPIFANPAIKKIFHGADYDMRSLYRDFG-- 104
Query: 127 GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWS 186
+++ ++++ + Q L + LA + K+ + L K Q +DWS
Sbjct: 105 ------------IEVVNLFDTMIASQF---LGESEFGLAALLKKRFGVELDKRYQKADWS 149
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
RP ++E +YA D LIE++ + ++ QKG
Sbjct: 150 KRPFSQEMLDYAMKDTSLLIELYRQLEAELKQKG 183
>gi|156844457|ref|XP_001645291.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
gi|156115951|gb|EDO17433.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 746
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
FL+D ++ L +L E+F P+ILK+ D+I+L D+G L
Sbjct: 262 FLVD--TLALRDELHILNEVFADPNILKVLHGAFMDIIWLQR-------DLG-------L 305
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ S+++ H R L SLA + ++ + SK+ Q +DW RPL++ YA
Sbjct: 306 YVVSLFDTYH---ASRALGFPRHSLAYLLEKYANFKTSKKYQLADWRVRPLSKPMHAYAR 362
Query: 200 IDAHCLIEIFN 210
D H L+ I++
Sbjct: 363 ADTHFLLNIYD 373
>gi|54025710|ref|YP_119952.1| RNase D [Nocardia farcinica IFM 10152]
gi|54017218|dbj|BAD58588.1| putative RNase D [Nocardia farcinica IFM 10152]
Length = 424
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 147 HLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
L +LG +L E LA + + LL +L K +DWS RPL E NYAA+D L
Sbjct: 124 RLFDTELGGRLAGFERVGLAAMVERLLGRTLRKGHGAADWSTRPLPAEWLNYAALDVELL 183
Query: 206 IEIFNIFQVKVAQKGNSCSSISELD 230
+E+ + ++ ++G S + E +
Sbjct: 184 LELRDAVAAELQRQGKSDWAAQEFE 208
>gi|395334008|gb|EJF66384.1| ribonuclease H-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 419
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 38/226 (16%)
Query: 28 ALSQ--SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLS 85
A+SQ S ++G D EW+P + V+L+QLA + + L+ +S
Sbjct: 64 AISQLDSKVLGFDLEWRPNFIKGNPENPVALVQLASE--------------DTILLIHVS 109
Query: 86 SIPLPSIWELLKELFVSPDILKLGFKFKQDL--IYLSSTFCSQGCDIGFDRVEPYLDITS 143
+ + E LKEL + P+++K G ++D +++ ++ C +D++
Sbjct: 110 F--MHAFPEKLKELLLDPNVVKAGVGIQKDCKKLWIDHRVDTRNC----------VDLSL 157
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSK-ELQCSDWSNRPLTEEQKNYAAIDA 202
+ + + + K L+ +C+ D++L+K ++Q S+W RPL Q+ YAA D
Sbjct: 158 LARTVDNARWKGKY-ANPIGLSRLCETYEDLTLNKGKIQTSNWE-RPLDLRQQEYAANDC 215
Query: 203 HCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
H + ++ ++A+ + S + + D + G+L +P G
Sbjct: 216 HAGLVLYK----RLAEMATAMSPVPHRVWYSFDT-ISGMLYQPSSG 256
>gi|317139033|ref|XP_003189119.1| 3-5 exonuclease [Aspergillus oryzae RIB40]
Length = 340
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 32/213 (15%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPR-VSLLQLACQPGPRFNP 69
+H + ES E +++ S ++GLD EWK S + VSL+QLA
Sbjct: 100 VHYCKTLESAET--ISKMFSDEPILGLDIEWKANASAADGILKNVSLIQLAS-------- 149
Query: 70 ESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
S +F + + P +L LK + SPD++K G K D L
Sbjct: 150 ----SRRIALFHIAMFR-PARGAEDLVPPTLKRILESPDVIKAGVSIKADCTRLRKYLGI 204
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKL-PKETKSLANICKELLDISLSK--ELQC 182
+ I +++ +Y + + Q L K T +L+ +E I L+K E++C
Sbjct: 205 ETRGI--------FELSHLYKLVKYSQSNPGLVNKRTVNLSAQVEEHFGIPLAKDVEVRC 256
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
SDW++ L Q +YAA D + +FN K
Sbjct: 257 SDWAS-ALDYSQVHYAAADPFACVCLFNTMNAK 288
>gi|164656377|ref|XP_001729316.1| hypothetical protein MGL_3351 [Malassezia globosa CBS 7966]
gi|159103207|gb|EDP42102.1| hypothetical protein MGL_3351 [Malassezia globosa CBS 7966]
Length = 348
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 87/210 (41%), Gaps = 46/210 (21%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFP----RVSLLQLACQPGP 65
K HLV P H + +VGLD EW NF + ++ QLA
Sbjct: 107 KSHLVDKLLPPALAHTN---TLGGIVGLDLEW--------NFGLRMGKTAVAQLA----- 150
Query: 66 RFNPESDESNASVVFLLDLSSIP-LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFC 124
A+ +F++ LS + LP + L + P ILK G +QDL L F
Sbjct: 151 ---------TANDIFVIHLSQMKRLP---DTLVAMLQDPHILKSGVAVRQDLSKLQRDFG 198
Query: 125 SQGCD-IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK-ELQC 182
+ C + R+ LD +N GR+ SL ++C L L+K +
Sbjct: 199 IETCGALELSRIAWKLD-PERWN-------GRR---ALISLRDLCAAYLGCDLAKGPTRT 247
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
S W+ PLT EQ YAA DA+ +E+ +
Sbjct: 248 SSWTQVPLTNEQITYAASDAYVSLELAHAM 277
>gi|296085897|emb|CBI31221.3| unnamed protein product [Vitis vinifera]
Length = 901
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 24/138 (17%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+I+L F C++ FD Q R
Sbjct: 281 LREVFKDPTKKKVMHGADRDIIWLQRDFGIYICNM-FDT----------------GQASR 323
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ ++ +KE Q DW RPL E YA D H L+ I+++ + +
Sbjct: 324 VLKLERNSLEHLLHHYCGVTANKEYQNGDWRLRPLPHEMLRYAREDTHYLLHIYDLMRTQ 383
Query: 216 VAQKGNSCSSISELDSSN 233
+ S++EL++SN
Sbjct: 384 LL-------SMAELENSN 394
>gi|419847060|ref|ZP_14370262.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 1-6B]
gi|419854794|ref|ZP_14377570.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 44B]
gi|386412369|gb|EIJ27041.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 1-6B]
gi|386417071|gb|EIJ31562.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 44B]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|159037106|ref|YP_001536359.1| 3'-5' exonuclease [Salinispora arenicola CNS-205]
gi|157915941|gb|ABV97368.1| 3'-5' exonuclease [Salinispora arenicola CNS-205]
Length = 451
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + + LL SL K +DWS+RPL E YAA+D L+E+ + + ++ ++
Sbjct: 170 ERVGLAALTEHLLGFSLEKHHSAADWSSRPLPESWLTYAALDVELLVELRDALEAELTRQ 229
Query: 220 GN 221
G
Sbjct: 230 GK 231
>gi|440741870|ref|ZP_20921202.1| ribonuclease D [Pseudomonas syringae BRIP39023]
gi|440378394|gb|ELQ15016.1| ribonuclease D [Pseudomonas syringae BRIP39023]
Length = 377
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W LL L +PD++K+ +DL L S P D +L+
Sbjct: 65 WRLLSALLENPDVIKVVHACSEDLEVLLRLTGSLPV--------PLFDTQLAAAYLN--- 113
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG + + + +E+LDI L K SDW RPL+E Q +YAA DA L E+F I
Sbjct: 114 LGFSM-----GYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTIL 168
Query: 213 QVKVA 217
+ +++
Sbjct: 169 RPRLS 173
>gi|291517068|emb|CBK70684.1| Ribonuclease D [Bifidobacterium longum subsp. longum F8]
Length = 398
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 101 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 160
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 161 EWAAEEF-SHALVAGL 175
>gi|453081050|gb|EMF09100.1| 3_5_exonuc-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 782
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F P I+K+ D+++L D+G L I +++ H +
Sbjct: 282 LNEVFADPGIIKVLHGAFMDIMWLQR-------DLG-------LYIVGLFDTFHAASV-- 325
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L +SLA + K+ ++ K+ Q +DW RPL E +YA D H L+ IF+ + +
Sbjct: 326 -LGYTGRSLAFLLKKFANVDAQKQYQTADWRVRPLPTELFDYARSDTHFLLYIFDNMRNE 384
Query: 216 VAQKGN 221
+ + N
Sbjct: 385 LIHRSN 390
>gi|448313811|ref|ZP_21503523.1| hypothetical protein C493_17846 [Natronolimnobius innermongolicus
JCM 12255]
gi|445597121|gb|ELY51199.1| hypothetical protein C493_17846 [Natronolimnobius innermongolicus
JCM 12255]
Length = 158
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQYL 416
+FL DVM GL +LR G D + E + L+ + E R L+TRD L
Sbjct: 2 RFLLDVMCGGLVAYLRMCGHDTVYAGDRDLEADDALLACATAEDRTLVTRDVDLAARAD- 60
Query: 417 IKNQIYRVKSLLKNQQLLEVIEA-FQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVE--A 473
++ ++SL + QL E+ A L ++++ C +CNGR EAV+ A
Sbjct: 61 -ESGSILLESLEVDDQLAELSNAGVDLTLADEPRF--CGRCNGRL--------EAVDRAA 109
Query: 474 AKGFQRIPD-CLFDKNLQFWQCMDCNQLYWEGTQY 507
+ G P+ W+C C Q +W G+ +
Sbjct: 110 SSGAVETPEYAPAADETDVWRCRACGQFFWRGSHW 144
>gi|68074623|ref|XP_679228.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499925|emb|CAH95040.1| conserved hypothetical protein [Plasmodium berghei]
Length = 661
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 153 LGRKLPKET-KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
L +K+ K KSL ++C + L LSK+LQ S+W+ RPL++EQ YA +DA+ LI I
Sbjct: 568 LPKKINKHYFKSLNDLCFQFLRKKLSKKLQLSNWNKRPLSKEQIEYAGLDAYVLIPI 624
>gi|221214157|ref|ZP_03587129.1| protein of unknown function DUF82 [Burkholderia multivorans CGD1]
gi|221165812|gb|EED98286.1| protein of unknown function DUF82 [Burkholderia multivorans CGD1]
Length = 246
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 32/187 (17%)
Query: 332 EKRLDDI-----------GDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAA 380
E+R+DD G PPP D + +F+ D + GLA+ LR G D
Sbjct: 62 ERRVDDGDRIDVYPERAGGAASAPPP-------DAW-RFVADAHLGGLAQLLRLAGFDTR 113
Query: 381 TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAF 440
+ + E+ +E R++LTRD +LL+ + +++ V + +QL E+
Sbjct: 114 YDNHFRDD--EIAAVAEREGRIVLTRDRELLKRRAIVRGCY--VHAQQPAEQLRELFARL 169
Query: 441 QLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQL 500
L Q C +CN + A++AA R+P + ++ +F C C ++
Sbjct: 170 DLA-PHMQPFRLCLRCN--------APLHALDAAAAAPRVPPGVRQRHRRFAACDVCRRV 220
Query: 501 YWEGTQY 507
+WEG+ +
Sbjct: 221 FWEGSHW 227
>gi|154494239|ref|ZP_02033559.1| hypothetical protein PARMER_03589 [Parabacteroides merdae ATCC
43184]
gi|423724766|ref|ZP_17698908.1| hypothetical protein HMPREF1078_02805 [Parabacteroides merdae
CL09T00C40]
gi|154086101|gb|EDN85146.1| 3'-5' exonuclease [Parabacteroides merdae ATCC 43184]
gi|409236726|gb|EKN29532.1| hypothetical protein HMPREF1078_02805 [Parabacteroides merdae
CL09T00C40]
Length = 193
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 35/182 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
LS+ VG D E +P + ++SL+Q++ +DE+ FL L+ I
Sbjct: 42 LSEFQSVGFDTETRPSFKKGQRY-KISLMQIS----------TDEA----CFLFRLNRIG 86
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+P E L+E + +LK+G + D F + DI N L
Sbjct: 87 IP---EALEEFLANEKVLKIGLSLRDD----------------FGAMRKRTDIQPA-NFL 126
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ + E SL I L + +SK + S+W L++ QK YAA+DA ++I
Sbjct: 127 DLQNYVGQFGIEDASLQKIYAILFNKKISKGQRLSNWEADVLSDAQKKYAALDAWACLKI 186
Query: 209 FN 210
+N
Sbjct: 187 YN 188
>gi|415712092|ref|ZP_11464588.1| ribonuclease D [Gardnerella vaginalis 55152]
gi|415715721|ref|ZP_11466144.1| ribonuclease D [Gardnerella vaginalis 1400E]
gi|388057319|gb|EIK80151.1| ribonuclease D [Gardnerella vaginalis 55152]
gi|388058168|gb|EIK80966.1| ribonuclease D [Gardnerella vaginalis 1400E]
Length = 451
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRAELKKQG 189
>gi|312132962|ref|YP_004000301.1| rnd [Bifidobacterium longum subsp. longum BBMN68]
gi|311773944|gb|ADQ03432.1| Rnd [Bifidobacterium longum subsp. longum BBMN68]
Length = 408
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 111 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 170
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 171 EWAAEEF-SHALVAGL 185
>gi|312066427|ref|XP_003136265.1| 3'-5' exonuclease [Loa loa]
Length = 845
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 27/150 (18%)
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD-----RVEPY 138
+ PL + +L E F P+ILK+ D+++L F ++ FD RV Y
Sbjct: 315 IDPFPLWNDMHILNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNM-FDTYKAMRVLNY 373
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
+ Y HL + C LD K+ Q +DW RPLT K YA
Sbjct: 374 SKFS--YQHL---------------VQTCCNHTLD----KKFQKADWRLRPLTGAHKTYA 412
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
D H L+ ++ ++K+ +G++ ++ E
Sbjct: 413 RSDTHYLLHCYDQLRIKLLDQGDAAGNLLE 442
>gi|225849884|ref|YP_002730118.1| DNA polymerase I [Persephonella marina EX-H1]
gi|225644858|gb|ACO03044.1| DNA polymerase I [Persephonella marina EX-H1]
Length = 584
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
N S +F+ D+ IP S E LKEL + ++ KF D+ +L + F
Sbjct: 52 GNYSKIFVYDMFRIPQFS--EHLKELLENKGVIGHNLKF--DIKFLKTNFG--------- 98
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
+ P + +++ + QL + +E SL+ + L D L K Q S W + LTEE
Sbjct: 99 -IFPQI----VFDTMIASQLLSEDSREKHSLSALSYRLTDNHLDKSQQRSPWGIKNLTEE 153
Query: 194 QKNYAAIDAHCLIEIFNIFQ 213
Q YAA D L EIF + +
Sbjct: 154 QLRYAAKDVQVLREIFPVLR 173
>gi|441521327|ref|ZP_21002988.1| ribonuclease D [Gordonia sihwensis NBRC 108236]
gi|441459159|dbj|GAC60949.1| ribonuclease D [Gordonia sihwensis NBRC 108236]
Length = 425
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + E L + L+K +DWS RPL + NYAA+D LIE+ N
Sbjct: 144 GRLLDFPKVNLAAMVAEFLHLGLAKGHGAADWSRRPLPADWLNYAALDVEVLIELRNAVA 203
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIR 264
+ ++G + E +L +P +T R++ + +R
Sbjct: 204 GALDERGRGEWAAQEFAH---------VLRRPPAPPRTDRWRRTSNIHNLR 245
>gi|425734728|ref|ZP_18853045.1| 3'-5' exonuclease family protein [Brevibacterium casei S18]
gi|425480664|gb|EKU47828.1| 3'-5' exonuclease family protein [Brevibacterium casei S18]
Length = 390
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L E LA + + L + L+KE DWS RPL EE NYAA+D L+ I +
Sbjct: 119 ARLLGWEKFGLAAVAERTLGVRLAKEHSAVDWSTRPLPEEWLNYAALDVEVLLPIRDALA 178
Query: 214 VKVAQKGN 221
++ G
Sbjct: 179 AELVAAGK 186
>gi|393910372|gb|EFO27811.2| 3'-5' exonuclease [Loa loa]
Length = 844
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 27/150 (18%)
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD-----RVEPY 138
+ PL + +L E F P+ILK+ D+++L F ++ FD RV Y
Sbjct: 315 IDPFPLWNDMHILNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNM-FDTYKAMRVLNY 373
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
+ Y HL + C LD K+ Q +DW RPLT K YA
Sbjct: 374 SKFS--YQHL---------------VQTCCNHTLD----KKFQKADWRLRPLTGAHKTYA 412
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
D H L+ ++ ++K+ +G++ ++ E
Sbjct: 413 RSDTHYLLHCYDQLRIKLLDQGDAAGNLLE 442
>gi|110289135|gb|AAP53938.2| Nucleolar protein, putative, expressed [Oryza sativa Japonica
Group]
Length = 902
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ + L+E+F P K+ +D+I+L F C++ FD
Sbjct: 322 LGDYLREIFKDPTKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------G 364
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L + SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 365 QASRILQMDRNSLEHLLHHFCGVTANKEYQSADWRLRPLPDEMIKYAREDTHYLLYIYDL 424
Query: 212 FQVKVAQK 219
++++ ++
Sbjct: 425 MRLRLVKE 432
>gi|403218486|emb|CCK72976.1| hypothetical protein KNAG_0M01230 [Kazachstania naganishii CBS
8797]
Length = 738
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 21/132 (15%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L+D +I L +L ++F P + K+ D+I+L D+G L
Sbjct: 264 YLVD--TIALRDELHILNQVFTDPMVTKVFHGAFMDIIWLQR-------DLG-------L 307
Query: 140 DITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
I S+++ H K LG PK SLA + + L + SK+ Q +DW RPL++ YA
Sbjct: 308 YIVSLFDTFHASKALG--FPKH--SLAYLLETLANFKTSKKYQLADWRIRPLSKPMSVYA 363
Query: 199 AIDAHCLIEIFN 210
D H L+ IF+
Sbjct: 364 RADTHFLLNIFD 375
>gi|326521328|dbj|BAJ96867.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 906
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ E L+E+F P K+ +D+I+L F C++ FD
Sbjct: 327 LGENLREVFQDPTKKKVMHGAGRDIIWLQRDFGIYVCNL-FDT----------------G 369
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L + SL ++ + ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 370 QASRILQMDRNSLEHLLQYFCGVTANKEYQSADWRLRPLPDEMTKYAREDTHYLLYIYDL 429
Query: 212 FQVKVAQK 219
++++ +
Sbjct: 430 MRLRLVNE 437
>gi|161523389|ref|YP_001578401.1| hypothetical protein Bmul_0209 [Burkholderia multivorans ATCC
17616]
gi|189351838|ref|YP_001947466.1| hypothetical protein BMULJ_03054 [Burkholderia multivorans ATCC
17616]
gi|160340818|gb|ABX13904.1| protein of unknown function DUF82 [Burkholderia multivorans ATCC
17616]
gi|189335860|dbj|BAG44930.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 246
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 33/199 (16%)
Query: 332 EKRLDD-----------IGDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAA 380
E+R+DD G PPP D + +F+ D + GLA+ LR G D
Sbjct: 62 ERRVDDGDRIDVYPERARGAASAPPP-------DAW-RFVADAHLGGLAQLLRLAGFDTR 113
Query: 381 TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAF 440
+ + E+ +E R++LTRD +LL+ + +++ V + +QL E+
Sbjct: 114 YDNHFRDD--EIAALAEREGRIVLTRDRELLKRRAIVRGCY--VHAQQPAEQLRELFARL 169
Query: 441 QLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQL 500
L Q C +CN + A++AA R+P + ++ +F C C ++
Sbjct: 170 DLA-PHMQPFRLCLRCN--------APLHALDAAAAAPRVPPGVRQRHRRFAACDVCRRV 220
Query: 501 YWEGTQYHNAVQKFIDVCK 519
+WEG+ + +Q ++ +
Sbjct: 221 FWEGSHWRR-MQALVEAMR 238
>gi|294055851|ref|YP_003549509.1| Ribonuclease D [Coraliomargarita akajimensis DSM 45221]
gi|293615184|gb|ADE55339.1| Ribonuclease D [Coraliomargarita akajimensis DSM 45221]
Length = 386
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 76/191 (39%), Gaps = 37/191 (19%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
++T+TE+ R + VG+D E+ R++ +P + ++QL G
Sbjct: 1 MITTTEA--LREAVRRAQDAGAVGVDTEFVWDRTY---YPTLGVVQLGYPDGH------- 48
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
+L P W L EL P+++K+ +QDL L C F
Sbjct: 49 ---------CELIDAPEIEDWSPLAELMSDPNVVKILHDAQQDLTILRR-VCGSDPKTIF 98
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
D +T+ + L T SL +I K LL + L+K SDW RPLTE
Sbjct: 99 D-----TQLTAGFIGLSS----------TISLRDILKTLLKVRLAKTETQSDWVARPLTE 143
Query: 193 EQKNYAAIDAH 203
Q YA D
Sbjct: 144 AQIKYAEDDVR 154
>gi|78064882|ref|YP_367651.1| hypothetical protein Bcep18194_A3405 [Burkholderia sp. 383]
gi|77965627|gb|ABB07007.1| protein of unknown function DUF82 [Burkholderia sp. 383]
Length = 254
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F D + GLA+ LR G D + + EL ++E R++LTRD +LL+ + +
Sbjct: 94 RFAADAHLGGLAQLLRLAGFDTCYDNHYRDD--ELAALAAREGRIVLTRDRELLKRR-AV 150
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y + +L QL E+ E L + C +CN PL ++AA
Sbjct: 151 ERGCY-LHALQPADQLRELFERLDLA-PHMRPFRLCLRCNA-----PLHP---LDAAAAA 200
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
R+P + ++ +F C C +++WEG+ +
Sbjct: 201 PRVPAGVRLRHRRFAACDVCRRVFWEGSHW 230
>gi|221202349|ref|ZP_03575382.1| protein of unknown function DUF82 [Burkholderia multivorans CGD2M]
gi|221209012|ref|ZP_03582008.1| protein of unknown function DUF82 [Burkholderia multivorans CGD2]
gi|221171134|gb|EEE03585.1| protein of unknown function DUF82 [Burkholderia multivorans CGD2]
gi|221177763|gb|EEE10177.1| protein of unknown function DUF82 [Burkholderia multivorans CGD2M]
Length = 246
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 33/199 (16%)
Query: 332 EKRLDDI-----------GDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAA 380
E+R+DD G PPP D + +F+ D + GLA+ LR G D
Sbjct: 62 ERRVDDGDRIDVYPERAGGAASAPPP-------DAW-RFVADAHLGGLAQLLRLAGFDTR 113
Query: 381 TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAF 440
+ + E+ +E R++LTRD +LL+ + +++ V + +QL E+
Sbjct: 114 YDNHFRDD--EIAALAEREGRIVLTRDRELLKRRAIVRGCY--VHAQQPAEQLRELFARL 169
Query: 441 QLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQL 500
L Q C +CN + A++AA R+P + ++ +F C C ++
Sbjct: 170 DLA-PHMQPFRLCLRCN--------APLHALDAAAAAPRVPPGVRQRHRRFAACDVCRRV 220
Query: 501 YWEGTQYHNAVQKFIDVCK 519
+WEG+ + +Q ++ +
Sbjct: 221 FWEGSHWRR-MQALVEAMR 238
>gi|26452498|dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana]
Length = 578
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+I+L F C++ FD Q R
Sbjct: 325 LREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------GQASR 367
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL + + ++ +KE Q +DW RPL EE YA D H L+ I+++ +++
Sbjct: 368 VLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDLIKLE 427
Query: 216 V 216
+
Sbjct: 428 L 428
>gi|398916110|ref|ZP_10657612.1| hypothetical protein PMI29_03470 [Pseudomonas sp. GM49]
gi|398175406|gb|EJM63161.1| hypothetical protein PMI29_03470 [Pseudomonas sp. GM49]
Length = 246
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + +++ R++LTRD +LL+ + +I
Sbjct: 97 RFVADAHLGGLASLLRMSGFD--TLFDNGFEDGEIAEIAAQQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL E+ E L S + S C CN PL E + E A+
Sbjct: 154 SHGCY-VHALKPSLQLRELYERLDLARSA-RPFSLCLHCN-----LPLH-EISPELAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P + F +C C ++YWEG+ +
Sbjct: 204 PQVPPRIGVLYSHFLRCDACQRIYWEGSHW 233
>gi|221503925|gb|EEE29602.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii VEG]
Length = 1048
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 46/222 (20%)
Query: 34 LVGLDAEWKPQRSHQSNFPRV-SLLQLACQPGPRFNPESDESNASVVFLLDL---SSIPL 89
+V LD EW P S+L LA + S VFL+DL + +
Sbjct: 811 VVALDLEW--------TLPHAASVLSLATE--------------SRVFLVDLVNDNPVYK 848
Query: 90 PSIWELLKELFVSPDILKLGFKFKQD---LIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
++ ++L+ LF +P I KL ++ D L + S G + + + +
Sbjct: 849 ATLLQMLRWLFANPFIAKLMYQASGDITKLFFALGAVGSPGALVHCIDLRKGRHLANAER 908
Query: 147 HLHHKQLG-----------------RKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
L + R + + SL +C+++L L K Q S+W+ RP
Sbjct: 909 ELREGVIAKEHFLEKNEEETPERYMRPVKRRFPSLQEMCRQVLHADLDKSEQRSNWNMRP 968
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDS 231
LT Q +YAA+DA+ LI + + + GN + E +
Sbjct: 969 LTASQAHYAALDAYVLILLEAALRRQGWIPGNILGGLGEFSA 1010
>gi|198421501|ref|XP_002119853.1| PREDICTED: similar to exosome component 10, partial [Ciona
intestinalis]
Length = 647
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 39/234 (16%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L ++S + +D E RS+Q L+QL S + +++D
Sbjct: 76 LMDELKEASEIAVDLEAHSYRSYQG---ITCLMQL--------------STRTKDYIVD- 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L + +L ++F +P+I+K+ D+I+L F +
Sbjct: 118 -TIALRAELNILNQVFANPNIIKVFHGADSDIIWLQRDFG-----------------IYV 159
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
N Q R L + SL + ++ K+ Q +DW RPL +E YA D H
Sbjct: 160 VNLFDTGQAARALGLQRHSLDYLLTHYCNVQADKKYQLADWRIRPLPKEMLLYAQGDTHY 219
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCE 258
L+ ++++ ++ + + G+ +D S LK EKP I N T L E
Sbjct: 220 LLYVYDMMRLDLVKTGDPGLLHKVIDKSRDICCLK--YEKP-ITNDTSHLVLLE 270
>gi|331696705|ref|YP_004332944.1| 3'-5' exonuclease [Pseudonocardia dioxanivorans CB1190]
gi|326951394|gb|AEA25091.1| 3'-5' exonuclease [Pseudonocardia dioxanivorans CB1190]
Length = 394
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
L TS+++ +L LP+ L + ++LL ++L K +DWS RPL E+ YA
Sbjct: 103 LAPTSLFDTELAGRLA-GLPR--VGLGPMVEQLLGLALEKGHGAADWSRRPLPEDWLVYA 159
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNSCSSISELDS 231
A+D LIE+ ++ +A++G S + E ++
Sbjct: 160 ALDVEVLIELRDLLAGMLAEQGKSEFAAQEFEA 192
>gi|292617367|ref|XP_697980.4| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Danio
rerio]
Length = 1361
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 34/207 (16%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L ALS S VG D EW P + + +V+++QL + E + + +
Sbjct: 57 LRSALSSGSAVGFDLEWPPSFT-KGKTKKVAMVQLC----------ASEDKCYLFHISSM 105
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P P LK +I+K+G + D L S + DI + +D++ +
Sbjct: 106 SGFP-PG----LKMFLEDENIMKVGVGIEGDKWKLLSDY-----DIKLKNI---VDLSDL 152
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDA 202
N + E SL + K LL L K+ ++CS W + LTE+QK YAA DA
Sbjct: 153 ANE-------KLRCCEKWSLDGLVKHLLKKQLFKDKLVRCSHWDDFSLTEDQKRYAATDA 205
Query: 203 HCLIEIFNIFQVKVAQ-KGNSCSSISE 228
+ + I+ Q ++ G+S S+ E
Sbjct: 206 YAGLLIYQKLQEMISGCSGSSALSLKE 232
>gi|152965548|ref|YP_001361332.1| 3'-5' exonuclease [Kineococcus radiotolerans SRS30216]
gi|151360065|gb|ABS03068.1| 3'-5' exonuclease [Kineococcus radiotolerans SRS30216]
Length = 427
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 146 NHLHHKQLGRKLPKETK-SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
L +LG ++ + L + +ELL + L+KE DWS RPL E YAA+D
Sbjct: 123 TRLFDTELGSRIAGLPRVGLGAVVEELLGLRLAKEHSAVDWSTRPLPEPWLTYAALDVEV 182
Query: 205 LIEIFNIFQVKVAQKGN 221
L+++ + ++A +G
Sbjct: 183 LVQVRDALAERLAAQGK 199
>gi|417948703|ref|ZP_12591846.1| ribonuclease D [Vibrio splendidus ATCC 33789]
gi|342809314|gb|EGU44435.1| ribonuclease D [Vibrio splendidus ATCC 33789]
Length = 372
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ A + E + + L K +DW RPL+++Q NYAA D H L+ ++N KV + G
Sbjct: 115 STGFAALVSEFVGVDLDKSESRTDWLARPLSQKQLNYAAADVHYLMPMYNKLLEKVMEAG 174
Query: 221 -----------NSCSSISELDSSNLDLGLKGILE-KPD---IGNKTVRFKLCEALDIIRA 265
I +++ L +KG+ + KP I ++L EA+ A
Sbjct: 175 WWEAAQQESDLQVTKRIRKVNPDTAYLDIKGVWQLKPQQLAILRPLATWRLKEAIKRDLA 234
Query: 266 TSYYSQCLPEGVVSRVSYLNTMPMDESL--VKIVRKYGEKI 304
++ + V+R + N M+E + VR++G KI
Sbjct: 235 LNFIFKEQDLWAVARFAIKNPKRMEEEGFDFRSVRRHGAKI 275
>gi|222612881|gb|EEE51013.1| hypothetical protein OsJ_31642 [Oryza sativa Japonica Group]
Length = 877
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ + L+E+F P K+ +D+I+L F C++ FD
Sbjct: 297 LGDYLREIFKDPTKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------G 339
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L + SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 340 QASRILQMDRNSLEHLLHHFCGVTANKEYQSADWRLRPLPDEMIKYAREDTHYLLYIYDL 399
Query: 212 FQVKVAQK 219
++++ ++
Sbjct: 400 MRLRLVKE 407
>gi|212528170|ref|XP_002144242.1| exosome component 3'-5' exonuclease [Talaromyces marneffei ATCC
18224]
gi|210073640|gb|EEA27727.1| exosome complex exonuclease Rrp6, putative [Talaromyces marneffei
ATCC 18224]
Length = 795
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F P+ILK+ D+++L D+G L + +++ +H +
Sbjct: 293 LNEVFADPNILKVFHGSTMDIVWLQR-------DLG-------LYVVGLFD-TYHAAVAL 337
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
PK +SL + ++ K+ Q +DW RPLTEE YA D H L+ I++ + +
Sbjct: 338 GFPK--RSLKFLLEKYARYEADKKYQMADWRLRPLTEEMLRYARADTHYLLYIYDCLRNE 395
Query: 216 VAQKGN 221
+ +K
Sbjct: 396 LLEKST 401
>gi|241600516|ref|XP_002405158.1| exosome component, putative [Ixodes scapularis]
gi|215502468|gb|EEC11962.1| exosome component, putative [Ixodes scapularis]
Length = 518
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
LL E+F +P I+K+ D+++L F L + +++ Q
Sbjct: 74 HLLNEVFANPKIIKVLHGADMDVLWLQRDFG--------------LYLVGLFDT---GQA 116
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLA + + + K+ Q +DW RPL E YA D H L+ ++++ +
Sbjct: 117 ARVLGMAHLSLAFLLRHYCHLDTDKKFQLADWRIRPLPLEMIKYAREDTHYLLHVYDLMR 176
Query: 214 VKVAQKGNSCSSI 226
+ KGN +++
Sbjct: 177 RDLLAKGNQLNNL 189
>gi|405979861|ref|ZP_11038202.1| hypothetical protein HMPREF9241_00925 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391236|gb|EJZ86300.1| hypothetical protein HMPREF9241_00925 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 413
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG-- 220
LA +C+++L + L K+ Q S+WS RPL+++ YAA+D L E++ +++ G
Sbjct: 139 GLAAVCEQVLGLGLVKDHQASNWSVRPLSKDWLRYAALDVELLTELYRRLSIQLNDAGRW 198
Query: 221 ----NSCSSISELD 230
C ++ LD
Sbjct: 199 EWMEEECDYLAHLD 212
>gi|218184595|gb|EEC67022.1| hypothetical protein OsI_33743 [Oryza sativa Indica Group]
Length = 854
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ + L+E+F P K+ +D+I+L F C++ FD
Sbjct: 274 LGDYLREIFKDPTKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------G 316
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L + SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 317 QASRILQMDRNSLEHLLHHFCGVTANKEYQSADWRLRPLPDEMIKYAREDTHYLLYIYDL 376
Query: 212 FQVKVAQK 219
++++ ++
Sbjct: 377 MRLRLVKE 384
>gi|407647033|ref|YP_006810792.1| ribonuclease D [Nocardia brasiliensis ATCC 700358]
gi|407309917|gb|AFU03818.1| ribonuclease D [Nocardia brasiliensis ATCC 700358]
Length = 417
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 146 NHLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
L +LG +L E LA + + LL +L K +DWS RPL +E NYAA+D
Sbjct: 118 QRLFDTELGGRLAGFERVGLAAMVENLLGHALRKGHGAADWSTRPLPDEWLNYAALDVEL 177
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELD 230
L+E+ + ++ +G S + E +
Sbjct: 178 LLELRDAVAAELDAQGKSDWAAQEFE 203
>gi|432331469|ref|YP_007249612.1| hypothetical protein Metfor_2098 [Methanoregula formicicum SMSP]
gi|432138178|gb|AGB03105.1| hypothetical protein Metfor_2098 [Methanoregula formicicum SMSP]
Length = 169
Score = 50.1 bits (118), Expect = 0.003, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRS----KKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
+F+ D M+ L ++LR +G D + S E L+ ++ R+LLTRDA+L R
Sbjct: 10 RFIADRMLGTLTRYLRFMGYDTESANSLEEGNTKEDTLLLGMAKEQHRILLTRDAELARR 69
Query: 414 QYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQL-MSRCTKCNGRFIQKPLSTEEAVE 472
+ Q ++S Q+ ++I+ ++ E +L +SRC+ CN + + E
Sbjct: 70 A---QGQAIYLRSEDVMDQVQQLID---YRVIERRLTLSRCSLCNTKLREANTCEIERTG 123
Query: 473 AAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
A R + +F+ C C++LYW G+
Sbjct: 124 YAPRDWR--------STRFYWCEQCHKLYWNGSH 149
>gi|409075144|gb|EKM75528.1| hypothetical protein AGABI1DRAFT_79866 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 882
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D+ I L E+L E+F P I+K+ + D+++L F L
Sbjct: 292 FVVDV--IALRDEMEVLNEVFTDPKIVKVFHGAESDIVWLQQDFN--------------L 335
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ ++++ H +L + P+ LAN+ + D K Q +DW RPL +E YA
Sbjct: 336 YVVNLFDTYHASKL-LEFPRH--GLANLLEMYCDYIPDKRYQLADWRIRPLPKEMLEYAR 392
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGL 238
D H L+ I++ + + +G S N L
Sbjct: 393 SDTHFLLFIYDNLRNALLDRGGPASRSRSSSPPNASTSL 431
>gi|381397371|ref|ZP_09922783.1| 3'-5' exonuclease [Microbacterium laevaniformans OR221]
gi|380775356|gb|EIC08648.1| 3'-5' exonuclease [Microbacterium laevaniformans OR221]
Length = 398
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L E L + ++ L I+L+K +DWS RPL + YAA+D L+++F + +
Sbjct: 107 ARLLGHERVGLGAVVEDTLGITLAKAHSAADWSTRPLPQPWLEYAALDVLHLVDVFEVLR 166
Query: 214 VKVAQKGNSCSSISELDS 231
++ ++G + + E ++
Sbjct: 167 DELEEQGKTDIAAQEFET 184
>gi|71027523|ref|XP_763405.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350358|gb|EAN31122.1| hypothetical protein TP03_0385 [Theileria parva]
Length = 996
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L L P ILK+ D+++L F + N ++ +
Sbjct: 536 LNRLTTDPKILKIMHGASNDVVWLQRDFN-----------------IFVVNLFDTREAAK 578
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L +SLA + ++ +I L+K Q SDWS RPL E +YA D+H LI +++ + +
Sbjct: 579 VLNLAEQSLAKLIQKYFNIKLNKRFQLSDWSKRPLDAEMLDYACCDSHYLIPLYSALKDE 638
Query: 216 VAQKGNSCSSISELDSSNLDLGLKGILEK-PDIGNKTVRFKLCEALDIIRATSYYSQCLP 274
+ K + I ++ ++ + LK +++ P+I K FK IR +P
Sbjct: 639 ILSKEDGRVKIIQVMNNGRETCLKQYVDRGPEIYKK---FKSISKRHKIR--------IP 687
Query: 275 E-GVVSRVSYLNTMPMDESLVKIVRKYGEKILLRE 308
E VS LN + L + + K EK+++R+
Sbjct: 688 ELDFVSYNLLLNLIAFRNFLARKLDK-SEKLIIRD 721
>gi|405967601|gb|EKC32742.1| Werner syndrome ATP-dependent helicase-like protein [Crassostrea
gigas]
Length = 261
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 30/180 (16%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
S VG D EW P + ++LQL ++A ++ LS I I
Sbjct: 93 SFVGFDMEW-PVSYRPGRQEKTAVLQLC-------------TSADKCYIFHLSCIG--GI 136
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
+L +L SP + K+G + D L D G V P L + L+ Q
Sbjct: 137 PPVLGQLLSSPRVRKVGVGIQSDFWKLER-------DYGLS-VAPILKSCVVDLSLYANQ 188
Query: 153 -LGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
LG K ET SL + K L ++K ++ SDWS PLT+ QK+YAA DA+ I+
Sbjct: 189 VLGSK---ETWSLDGLVKHLFQRKINKNPIVRKSDWSEFPLTDIQKSYAATDAYVSYLIY 245
>gi|347760629|ref|YP_004868190.1| ribonuclease D [Gluconacetobacter xylinus NBRC 3288]
gi|347579599|dbj|BAK83820.1| ribonuclease D [Gluconacetobacter xylinus NBRC 3288]
Length = 395
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 41/223 (18%)
Query: 14 VTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDE 73
V T + E + L V +D E+ +R++ +P + L+QLA +
Sbjct: 13 VLITTTAELEAVTTRLRGEPFVTIDTEFVRERTY---WPELCLVQLAGK----------- 58
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDL-IYLSSTFCSQGCDIGF 132
+ VV I L S+ ELL + ++K+ +QDL I+L F
Sbjct: 59 -DDVVVIDTTAPGIDLSSLGELLDD----AGVVKVFHAARQDLEIFLHL----------F 103
Query: 133 DRVEPYLDITSIYNHL--HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
DR+ L T + + H Q+G N+ LL + + K + SDWS RPL
Sbjct: 104 DRLPAALFDTQVAAMVAGHGDQVGYD---------NLVWSLLGVQIDKSHRFSDWSARPL 154
Query: 191 TEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSN 233
+ Q YAA D L +++ ++ Q+G +ELD N
Sbjct: 155 SPAQIGYAAADVTYLRLVYDKLLTQLQQEGRLEWVAAELDVLN 197
>gi|307197463|gb|EFN78697.1| Probable exonuclease mut-7-like protein [Harpegnathos saltator]
Length = 1058
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 12/160 (7%)
Query: 316 SKKKGRKRSSV-----IVDSREKRLDDIGDWQGPPPWDLSLGGDGYP----KFLCDVMVE 366
SKK R R + + R+ + IG Q P + D + +CD M+
Sbjct: 757 SKKNTRSRQDIQGKQDFQNKRDIPIRQIGVLQCSKPQSAKMYRDPIAAHTWRVVCDTMLG 816
Query: 367 GLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ-YLIKNQIYRVK 425
GL+ LR G+D + E + E R LLTR + + Y+ + YRV
Sbjct: 817 GLSSRLRMCGVDCVHVLFDEG-GNESANLAMVEHRFLLTRHRNYQKFEVYVPLEKCYRVL 875
Query: 426 SLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNG-RFIQKP 464
+QL EV+ F + ++++ + SRC KCN F++ P
Sbjct: 876 ENTPEKQLCEVLRHFDVVVTQNDIFSRCQKCNNDEFVKIP 915
>gi|153005072|ref|YP_001379397.1| 3'-5' exonuclease [Anaeromyxobacter sp. Fw109-5]
gi|152028645|gb|ABS26413.1| 3'-5' exonuclease [Anaeromyxobacter sp. Fw109-5]
Length = 296
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R+L ++ L+ + + + LSK Q SDW RPLT Q YAA+D H L+ + ++
Sbjct: 112 ARRLGRQGLGLSALVEAHFGVRLSKTFQRSDWGQRPLTAAQLAYAALDTHYLLALRDMLA 171
Query: 214 VKVAQKGNSCSSISELD 230
++ G S + E +
Sbjct: 172 GELDTLGASEQARREFE 188
>gi|393774580|ref|ZP_10362942.1| ribonuclease D [Novosphingobium sp. Rr 2-17]
gi|392720063|gb|EIZ77566.1| ribonuclease D [Novosphingobium sp. Rr 2-17]
Length = 405
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 37/202 (18%)
Query: 9 LKIH-LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
+KIH L+T+T+ E T L L++S + +D E+ + ++ +P + L+Q+A
Sbjct: 1 MKIHPLITTTD--ELTALCERLAKSDFIAVDTEFMRENTY---WPELCLVQIA------- 48
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
+ E A++ L + I L ++ELL + D+LK+ QD + + F +
Sbjct: 49 ---NTEEAAAIDPLAE--GIDLTPMFELLTN---NEDVLKVFHAGGQD-VEIIFNFTGRT 99
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
FD + ++ +Q+G +N+ + L +++ K + +DWS
Sbjct: 100 PHPIFDTQIAMMAVS------QSEQIG---------YSNLVEAWLGLTIDKGARFTDWSR 144
Query: 188 RPLTEEQKNYAAIDAHCLIEIF 209
RPLTE Q YA D L +IF
Sbjct: 145 RPLTERQIEYAIGDVTHLSKIF 166
>gi|398933920|ref|ZP_10666070.1| hypothetical protein PMI28_05768 [Pseudomonas sp. GM48]
gi|398159582|gb|EJM47877.1| hypothetical protein PMI28_05768 [Pseudomonas sp. GM48]
Length = 246
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E ++ + +++ R++LTRD +LL+ + +I
Sbjct: 97 RFVADAHLGGLASLLRMSGFD--TLYDNGFEDGQIAEIAAQQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL E+ E L S + S C CN PL E + E A+
Sbjct: 154 SHGCY-VHALKPSLQLRELYERLDLARSA-RPFSLCLHCN-----LPLH-EISPELAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
++P + F +C C ++YWEG+ +
Sbjct: 204 SQVPPRIGALYSHFLRCDACQRVYWEGSHW 233
>gi|347827584|emb|CCD43281.1| hypothetical protein [Botryotinia fuckeliana]
Length = 823
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P+I+K+ D+++L D+G L + +++ H+
Sbjct: 286 QVLNEVFADPNIIKVFHGAYMDIVWLQR-------DLG-------LYVVGLFD-THYA-- 328
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
R+L SLA + K+ +D K+ Q +DW RPL EE YA D H L+ IF+
Sbjct: 329 CRRLGFAGGSLAFLLKKYIDFDADKKYQLADWRIRPLPEEMFFYARADTHFLLYIFD 385
>gi|356514082|ref|XP_003525736.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 506
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
SI L+E+F P K+ D+++L F C++ FD
Sbjct: 140 SIGPYLREVFKDPSKRKVMHGADNDVVWLQRDFGIYICNL-FDT---------------- 182
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
Q + L E KSL + DI+ +KE Q +DW RPL E YA D H L+ I++
Sbjct: 183 HQASKVLKLERKSLEYLLCHFCDITANKEYQSADWRLRPLPYEMLRYAREDTHYLLYIYD 242
Query: 211 IFQVKV 216
++++
Sbjct: 243 FMRIEL 248
>gi|317475897|ref|ZP_07935153.1| 3'-5' exonuclease [Bacteroides eggerthii 1_2_48FAA]
gi|316907930|gb|EFV29628.1| 3'-5' exonuclease [Bacteroides eggerthii 1_2_48FAA]
Length = 210
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + + E L + ++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPQEAE--RAVAYLKKCPILGIDSETRPSFTKGQSH-KVALLQVSSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P I K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPIIM-----LLENPGITKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ C + ++ R + +SL I L +SK + S+W
Sbjct: 121 RAC-------------------VELQEYVRTFGIQDRSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LT Q+ YAA DA + I+N Q
Sbjct: 162 EAEMLTPSQQQYAATDAWACLNIYNRLQ 189
>gi|84496254|ref|ZP_00995108.1| putative ribonuclease D [Janibacter sp. HTCC2649]
gi|84383022|gb|EAP98903.1| putative ribonuclease D [Janibacter sp. HTCC2649]
Length = 428
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 147 HLHHKQLGRKL---PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
L +LG +L P+ LA + + L ++L+KE DWS RPL E YAA+D
Sbjct: 140 QLFDTELGARLLGLPR--VGLAAVVEHYLGLALAKEHSAVDWSTRPLPEPWLRYAALDVE 197
Query: 204 CLIEIFNIFQVKVAQKGNSCSSISELDS 231
L E+ N+ V +A++ S + E ++
Sbjct: 198 VLTELRNLMGVDLARQDKSEWARQEFEA 225
>gi|308810304|ref|XP_003082461.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
gi|116060929|emb|CAL57407.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
Length = 701
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 78 VVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
VV +L L S+ + + L + F P+ LK+ D+ +L F
Sbjct: 170 VVDVLALRSL----VRDALGKAFADPNTLKVMHGADNDVQWLQKDFG------------- 212
Query: 138 YLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
+ ++ +++ Q R L +K+LA + + I +K+ Q +DW RPLT E +Y
Sbjct: 213 -IFVSCLFDT---GQAARVLELPSKALAYLLQHYCGIKANKKFQLADWRVRPLTREMLDY 268
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGIL 242
A D H L+ +++ + +A +G +SI+ + + D+ LK L
Sbjct: 269 ARGDTHYLLYVYDELKKALAARGE--NSIAATLTQSRDVCLKKYL 311
>gi|378549176|ref|ZP_09824392.1| hypothetical protein CCH26_03785 [Citricoccus sp. CH26A]
Length = 385
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
GR L LA++ ++LL ++L+KE +DWS RPL E+ YAA+D L+E+
Sbjct: 98 GRILGLPRVGLASVLEQLLGVTLAKEHSAADWSKRPLPEDWLRYAALDVELLVEL 152
>gi|355571902|ref|ZP_09043110.1| protein of unknown function DUF82 [Methanolinea tarda NOBI-1]
gi|354824998|gb|EHF09233.1| protein of unknown function DUF82 [Methanolinea tarda NOBI-1]
Length = 172
Score = 50.1 bits (118), Expect = 0.003, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 29/162 (17%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATP----RSKKPEPRELIDQTSKEKRVLLTRDAKL 410
G +FL D M+ L ++LR +G D + E L+ + E R+LLT D +L
Sbjct: 10 GQTRFLADRMLGTLCRYLRFMGYDTVSATEMAEGNSREDTVLLSRARTEGRILLTMDREL 69
Query: 411 LRH----QYLI--KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKP 464
R LI KN + ++++L + ++ + +RC+ CN + +P
Sbjct: 70 ARRGGSDAVLIEEKNVMDQIRALARAGMIVPEVR-----------FTRCSLCNT--LLRP 116
Query: 465 LSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
E + A R D N F+ C C +LYW G+
Sbjct: 117 ARRAEILRADYAPGR------DHNRTFYWCARCRKLYWHGSH 152
>gi|270283861|ref|ZP_06193723.1| putative ribonuclease D [Bifidobacterium gallicum DSM 20093]
gi|270277581|gb|EFA23435.1| putative ribonuclease D [Bifidobacterium gallicum DSM 20093]
Length = 262
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
R L E LA + + L ++L+KE +DWS+RPL + +NYAA+D LIE+
Sbjct: 123 ARLLGLERFGLAYVTERYLGLTLAKEHSAADWSHRPLPRDWRNYAALDVELLIEL 177
>gi|154301232|ref|XP_001551029.1| hypothetical protein BC1G_10286 [Botryotinia fuckeliana B05.10]
Length = 823
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P+I+K+ D+++L D+G L + +++ H+
Sbjct: 286 QVLNEVFADPNIIKVFHGAYMDIVWLQR-------DLG-------LYVVGLFD-THYA-- 328
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
R+L SLA + K+ +D K+ Q +DW RPL EE YA D H L+ IF+
Sbjct: 329 CRRLGFAGGSLAFLLKKYIDFDADKKYQLADWRIRPLPEEMFFYARADTHFLLYIFD 385
>gi|367005124|ref|XP_003687294.1| hypothetical protein TPHA_0J00370 [Tetrapisispora phaffii CBS 4417]
gi|357525598|emb|CCE64860.1| hypothetical protein TPHA_0J00370 [Tetrapisispora phaffii CBS 4417]
Length = 743
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 19/149 (12%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L+D +I L ++L +F P I K+ D+I+L D+G L
Sbjct: 260 YLVD--TIALRDKLQVLNVVFTDPKITKILHGAFMDIIWLQR-------DLG-------L 303
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
I S+++ H R L SLA + + SK+ Q +DW RPL++ YA
Sbjct: 304 YIVSLFDTYH---ASRALGFPRHSLAYLLERFAHFKTSKQYQLADWRTRPLSKAMNAYAR 360
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
D H L+ IF+ + + Q+ S + E
Sbjct: 361 ADTHFLLNIFDQLRNMLIQEDKLASMLHE 389
>gi|330506585|ref|YP_004383013.1| hypothetical protein MCON_0324 [Methanosaeta concilii GP6]
gi|328927393|gb|AEB67195.1| protein of unknown function (DUF82) [Methanosaeta concilii GP6]
Length = 187
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 29/163 (17%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIK 418
FL D+M+ LA+ LR +G D A P S + L+ Q +E R+L+TRD +L
Sbjct: 35 FLVDLMLLRLARWLRLLGQDVANPESDSD--KALLGQAKRENRILVTRDKRLFSSCSAAG 92
Query: 419 NQIYRVKSLLKNQQLLEVIE-AFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ ++S +Q+LE+ E L+I RCT CN +++ A+G
Sbjct: 93 VEGILIRSSRICEQILEMAEKGIALRID----PQRCTLCNS-----------SLKEAEG- 136
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDVCKL 520
++ + W C +C +LYW G+ + N ++K ++ +L
Sbjct: 137 ---------RDGEIWICPNCQRLYWRGSHWKN-MEKMLEALRL 169
>gi|294654453|ref|XP_456510.2| exosome component 3'-5' exonuclease [Debaryomyces hansenii CBS767]
gi|199428893|emb|CAG84465.2| DEHA2A04334p [Debaryomyces hansenii CBS767]
Length = 776
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 19/128 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH-HKQ 152
E L ++F +PDI+K+ D+I+L D+G L I S+++ H K+
Sbjct: 293 ESLNKVFTNPDIVKVFHGAFMDIIWLQR-------DLG-------LYIVSLFDTYHASKK 338
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG PK SLA + + + SK+ Q +DW RPL+ YA D H L+ I++
Sbjct: 339 LG--FPKF--SLAYLLETFANFKTSKKYQLADWRIRPLSPPMLAYARSDTHFLLNIYDQL 394
Query: 213 QVKVAQKG 220
+ K+ G
Sbjct: 395 RNKLIDAG 402
>gi|146302940|ref|YP_001190256.1| hypothetical protein Msed_0155 [Metallosphaera sedula DSM 5348]
gi|145701190|gb|ABP94332.1| protein of unknown function DUF82 [Metallosphaera sedula DSM 5348]
Length = 166
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 67/164 (40%), Gaps = 31/164 (18%)
Query: 355 GYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ 414
Y KF+ D M+ LA+ LR +G D T K E +++ E R++LTRD L
Sbjct: 2 AYQKFIVDAMLGKLARWLRILGYD--TLYFKDMEDWKILKIAKNENRIILTRDRGLCNRA 59
Query: 415 YLIKNQIYRV---KSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAV 471
+ + V + + K LL L I+ D SRC++CNG +K
Sbjct: 60 KKNSIECFLVLPDEEIEKTLALLSHKFGLLLDINPDA--SRCSECNGILEKK-------- 109
Query: 472 EAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
DKNL W C C + YW+G + + I
Sbjct: 110 --------------DKNL--WVCTKCKKEYWKGRHWDTITEILI 137
>gi|378767004|ref|YP_005195469.1| ribonuclease D [Pantoea ananatis LMG 5342]
gi|365186482|emb|CCF09432.1| Ribonuclease D [Pantoea ananatis LMG 5342]
Length = 373
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 38/199 (19%)
Query: 31 QSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLP 90
Q + V LD E+ R++ +P++ L+QL F+ E + L+D PLP
Sbjct: 21 QHTAVALDTEFVRTRTY---YPQLGLIQL-------FDGEQ-------LVLID----PLP 59
Query: 91 -SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH 149
W EL + K +DL F +P +D T I
Sbjct: 60 VRDWSPFIELLTDTRVTKFLHAGGEDLEVFLHRFAVLP--------QPMID-TQILAAFS 110
Query: 150 HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+ L + A++ + L K +DW RPLTE Q YAA D H L+ I
Sbjct: 111 GQPL-------SWGFASMVAHFTQVELDKSEARTDWLARPLTERQCQYAAADVHYLLPIA 163
Query: 210 NIFQVKVAQKGNSCSSISE 228
+ +V Q GN +++SE
Sbjct: 164 HQLMQQVEQAGNMAAALSE 182
>gi|289549017|ref|YP_003474005.1| DNA-directed DNA polymerase [Thermocrinis albus DSM 14484]
gi|289182634|gb|ADC89878.1| DNA-directed DNA polymerase [Thermocrinis albus DSM 14484]
Length = 575
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+FLLDL + + LKEL ++ KF DL YL +EPY
Sbjct: 47 IFLLDLFELGERGVL-FLKELLSQKGVVGHNLKF--DLKYLYRY-----------HIEPY 92
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
++++ + QL +L + SL ++ L L K LQ SDW +R LT+ Q YA
Sbjct: 93 ----AVFDTMVASQLLAELDRH--SLQSVAMHYLGQVLDKSLQLSDWGSRVLTKAQLEYA 146
Query: 199 AIDAHCLIEIFNIFQVKVAQ 218
A+D + ++F I K+ Q
Sbjct: 147 ALDVVVVRDLFPILLEKLNQ 166
>gi|415717569|ref|ZP_11466932.1| ribonuclease D [Gardnerella vaginalis 1500E]
gi|388060916|gb|EIK83591.1| ribonuclease D [Gardnerella vaginalis 1500E]
Length = 445
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRGELKKQG 189
>gi|291617685|ref|YP_003520427.1| Rnd [Pantoea ananatis LMG 20103]
gi|291152715|gb|ADD77299.1| Rnd [Pantoea ananatis LMG 20103]
Length = 373
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 38/199 (19%)
Query: 31 QSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLP 90
Q + V LD E+ R++ +P++ L+QL F+ E + L+D PLP
Sbjct: 21 QHTAVALDTEFVRTRTY---YPQLGLIQL-------FDGEQ-------LVLID----PLP 59
Query: 91 -SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH 149
W EL + K +DL F +P +D T I
Sbjct: 60 VRDWSPFIELLTDTRVTKFLHAGGEDLEVFLHRFAVLP--------QPMID-TQILAAFS 110
Query: 150 HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+ L + A++ + L K +DW RPLTE Q YAA D H L+ I
Sbjct: 111 GQPL-------SWGFASMVAHFTQVELDKSEARTDWLARPLTERQCQYAAADVHYLLPIA 163
Query: 210 NIFQVKVAQKGNSCSSISE 228
+ +V Q GN +++SE
Sbjct: 164 HQLMQQVEQAGNMAAALSE 182
>gi|50552133|ref|XP_503541.1| YALI0E04444p [Yarrowia lipolytica]
gi|49649410|emb|CAG79122.1| YALI0E04444p [Yarrowia lipolytica CLIB122]
Length = 738
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ- 152
E+ E+ P I+K+ D+ +L F L I S+++ H Q
Sbjct: 282 EIFNEVLTDPKIVKVLHGATMDIQWLQRDFG--------------LYIVSLFDTFHAAQA 327
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG K SLA + + + SK+ Q SDW RP++ EQ YA D H L+ I++
Sbjct: 328 LGLK----GHSLAFLLQHYANFVTSKKYQLSDWRIRPMSPEQLLYARADTHFLLNIYDQL 383
Query: 213 QVKVAQK 219
+ + QK
Sbjct: 384 KNALVQK 390
>gi|415727029|ref|ZP_11471257.1| ribonuclease D [Gardnerella vaginalis 00703Dmash]
gi|388062758|gb|EIK85363.1| ribonuclease D [Gardnerella vaginalis 00703Dmash]
Length = 445
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRGELKKQG 189
>gi|197927293|ref|NP_001128149.1| Werner syndrome ATP-dependent helicase [Pongo abelii]
gi|55726573|emb|CAH90053.1| hypothetical protein [Pongo abelii]
Length = 1486
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLYK-KRKLGKVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++ +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELADV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K L L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHPLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|312196135|ref|YP_004016196.1| 3'-5' exonuclease [Frankia sp. EuI1c]
gi|311227471|gb|ADP80326.1| 3'-5' exonuclease [Frankia sp. EuI1c]
Length = 440
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L E L + + +L L K +DWS RPL E YAA+D L+E+ +
Sbjct: 126 GRLLGYERVGLGMMVERVLGFGLEKGHSAADWSTRPLPEPWLRYAALDVELLVELRDALA 185
Query: 214 VKVAQKG 220
V++A+ G
Sbjct: 186 VELAETG 192
>gi|242003018|ref|XP_002422581.1| 3-5 exonuclease, putative [Pediculus humanus corporis]
gi|212505371|gb|EEB09843.1| 3-5 exonuclease, putative [Pediculus humanus corporis]
Length = 522
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 80/182 (43%), Gaps = 42/182 (23%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
S +G D EW S+ +P V+LLQLA + + + + L LS IP I
Sbjct: 27 SALGFDCEW---VSYHVRYP-VALLQLA----------TYKKDCYLFRLNKLSIIPFELI 72
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
E+ I KLG D +YLS+ + DI RV+ D+
Sbjct: 73 -----EILEDQHIFKLGVLPAIDGLYLSADY-----DI---RVQTTFDL----------- 108
Query: 153 LGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
R L K L ++ K +L I L+K+ + SDW L+ QK YAA+DA I++F
Sbjct: 109 --RYLYPMCKGLGDLAKVVLGIMLNKDGIIAGSDWECHELSYSQKKYAAMDALVAIDVFK 166
Query: 211 IF 212
F
Sbjct: 167 RF 168
>gi|386079174|ref|YP_005992699.1| ribonuclease D Rnd [Pantoea ananatis PA13]
gi|354988355|gb|AER32479.1| ribonuclease D Rnd [Pantoea ananatis PA13]
Length = 373
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 38/199 (19%)
Query: 31 QSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLP 90
Q + V LD E+ R++ +P++ L+QL F+ E + L+D PLP
Sbjct: 21 QHTAVALDTEFVRTRTY---YPQLGLIQL-------FDGEQ-------LVLID----PLP 59
Query: 91 -SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH 149
W EL + K +DL F +P +D T I
Sbjct: 60 VRDWSPFIELLTDTRVTKFLHAGGEDLEVFLHRFAVLP--------QPMID-TQILAAFS 110
Query: 150 HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+ L + A++ + L K +DW RPLTE Q YAA D H L+ I
Sbjct: 111 GQPL-------SWGFASMVAHFTQVELDKSEARTDWLARPLTERQCQYAAADVHYLLPIA 163
Query: 210 NIFQVKVAQKGNSCSSISE 228
+ +V Q GN +++SE
Sbjct: 164 HQLMQQVEQAGNMAAALSE 182
>gi|427720395|ref|YP_007068389.1| 3'-5' exonuclease [Calothrix sp. PCC 7507]
gi|427352831|gb|AFY35555.1| 3'-5' exonuclease [Calothrix sp. PCC 7507]
Length = 306
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 30/194 (15%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
T E H+ +++ + LD E ++S PR+SL+Q+ P + +
Sbjct: 5 TSPSEIRHIIAEYTKARTLWLDTEVA---DYKSRRPRLSLIQVLDNP--------QDMSG 53
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRV 135
V+LLD+ P + E ++++ V+P I K+ D+ +L S C + +
Sbjct: 54 DRVYLLDVLDQP-DVVAEFVEQIMVNPLIEKVFHNASYDVKFLGSKQVKNITCTLEIAKK 112
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDIS-LSKELQCSDWSNRPLTEEQ 194
PY LP L + L D + + K+ Q SDW RPLTEEQ
Sbjct: 113 IPYY----------------LLPLPNYQLKTLATVLCDFNNIDKQEQNSDWGKRPLTEEQ 156
Query: 195 KNYAAIDAHCLIEI 208
+YA +D L ++
Sbjct: 157 IDYAYLDCIYLAQV 170
>gi|415729490|ref|ZP_11472516.1| ribonuclease D [Gardnerella vaginalis 6119V5]
gi|388064524|gb|EIK87058.1| ribonuclease D [Gardnerella vaginalis 6119V5]
Length = 445
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRGELKKQG 189
>gi|237844623|ref|XP_002371609.1| 3'-5' exonuclease domain-containing protein [Toxoplasma gondii ME49]
gi|211969273|gb|EEB04469.1| 3'-5' exonuclease domain-containing protein [Toxoplasma gondii ME49]
Length = 1045
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 77 SVVFLLDL---SSIPLPSIWELLKELFVSPDILKLGFKFKQD---LIYLSSTFCSQGCDI 130
S VFL+DL + + ++ ++L+ LF +P I KL ++ D L + S G +
Sbjct: 830 SRVFLVDLVNDNPVYKATLLQMLRWLFANPFIAKLMYQASGDITKLFFALGAVGSPGALV 889
Query: 131 GFDRVEPYLDITSIYNHLHHKQLG-----------------RKLPKETKSLANICKELLD 173
+ + + L + R + + SL +C+++L
Sbjct: 890 HCIDLRKGRHLANAERELREGVIAKEHFLEKNEEETPERYMRPVKRRFPSLQEMCRQVLH 949
Query: 174 ISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDS 231
L K Q S+W+ RPLT Q +YAA+DA+ LI + + + GN + E +
Sbjct: 950 ADLDKSEQRSNWNMRPLTASQAHYAALDAYVLILLEAALRRQGWIPGNILGGLGEFSA 1007
>gi|329962096|ref|ZP_08300107.1| 3'-5' exonuclease [Bacteroides fluxus YIT 12057]
gi|328530744|gb|EGF57602.1| 3'-5' exonuclease [Bacteroides fluxus YIT 12057]
Length = 231
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L L+G+D+E +P + + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPWEAE--KAVTYLKGCPLLGIDSETRPSFT-KGHSHKVALLQVSSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPII-----TLLETPGVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ C + ++ R + KSL I L +SK + S+W
Sbjct: 121 RAC-------------------IELQEYVRTFGIQDKSLQKIYGILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L+E QK YAA DA + I+N Q
Sbjct: 162 EADVLSESQKLYAATDAWACLNIYNKLQ 189
>gi|221482990|gb|EEE21314.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii GT1]
Length = 1048
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 54/226 (23%)
Query: 34 LVGLDAEWKPQRSHQSNFPRV-SLLQLACQPGPRFNPESDESNASVVFLLDL---SSIPL 89
+V LD EW P S+L LA + S VFL+DL + +
Sbjct: 811 VVALDLEW--------TLPHAASVLSLATE--------------SRVFLVDLVNDNPVYK 848
Query: 90 PSIWELLKELFVSPDILKLGFKFKQD---LIYLSSTFCSQGCDI---------------- 130
++ ++L+ LF +P I KL ++ D L + S G +
Sbjct: 849 ATLLQMLRWLFANPFIAKLMYQASGDITKLFFALGAVGSPGALVHCIDLRKGRHLANSER 908
Query: 131 ----GFDRVEPYLDITSIYN-HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
G E +L+ + + + R+ P SL +C+++L L K Q S+W
Sbjct: 909 ELREGVIAKEHFLEKNEEETPERYMRPVKRRFP----SLQEMCRQVLHADLDKSEQRSNW 964
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDS 231
+ RPLT Q +YAA+DA+ LI + + + GN + E +
Sbjct: 965 NMRPLTASQAHYAALDAYVLILLEAALRRQGWIPGNILGGLGEFSA 1010
>gi|308177768|ref|YP_003917174.1| ribonuclease D [Arthrobacter arilaitensis Re117]
gi|307745231|emb|CBT76203.1| putative ribonuclease D [Arthrobacter arilaitensis Re117]
Length = 416
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
SL + ELL + L+KE DWS RPL E NYAA+D L E+ + ++G
Sbjct: 146 SLGTMVGELLGLQLAKEHSAVDWSTRPLPESWLNYAALDVEVLEELRQAITATLEEQGKL 205
Query: 223 CSSISELD 230
+I E +
Sbjct: 206 EFAIQEFE 213
>gi|344234698|gb|EGV66566.1| hypothetical protein CANTEDRAFT_128954 [Candida tenuis ATCC 10573]
Length = 737
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH-HKQLG 154
L +F +P I+K+ D+I+L D+G L I S+++ H K+LG
Sbjct: 275 LNVVFTNPQIVKVFHGAFMDIIWLQR-------DLG-------LYIVSLFDTYHASKKLG 320
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
PK SLA + + SK+ Q +DW RPL+ YA D H L+ IF+ +
Sbjct: 321 --FPK--FSLAYLLETFAKFKTSKKYQLADWRIRPLSTSMLAYARSDTHFLLNIFDHLKN 376
Query: 215 KVAQKGN 221
K+ +GN
Sbjct: 377 KLIDQGN 383
>gi|37523316|ref|NP_926693.1| ribonuclease D [Gloeobacter violaceus PCC 7421]
gi|35214320|dbj|BAC91688.1| glr3747 [Gloeobacter violaceus PCC 7421]
Length = 195
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 14 VTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDE 73
V TE+ + + L ++ +D E + RVSLLQ+ ++ S+
Sbjct: 9 VLVTETAQLSELVDRWQTRKVLAVDTETAHWHQVSTGKNRVSLLQV-------WDGTSEA 61
Query: 74 SNASVVFLLDLSSIPLPSI--WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG--CD 129
+ F +DL++ ++ WE++K + +P DL YL ++ C
Sbjct: 62 VSVIDCFAVDLTAFVEKTMRNWEIVKLIHNAP----------YDLAYLGGAAQARSVVCT 111
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
+ R P R+ E SL + L I L K Q S+W+ RP
Sbjct: 112 LQMARSIP---------------TSRRGALERNSLKALSAHFLGIELDKRYQASNWALRP 156
Query: 190 LTEEQKNYAAIDAHCLIEIF 209
LT EQ +YAA+D I+
Sbjct: 157 LTAEQLDYAALDPWVTFHIW 176
>gi|378579869|ref|ZP_09828530.1| ribonuclease D [Pantoea stewartii subsp. stewartii DC283]
gi|377817514|gb|EHU00609.1| ribonuclease D [Pantoea stewartii subsp. stewartii DC283]
Length = 373
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A++ + L K +DW RPLTE Q YAA D H L+ I + +V Q GN
Sbjct: 117 GFASMVAHFTQVELDKSEARTDWLARPLTERQCQYAAADVHYLLPIAHQLMAQVEQVGNV 176
Query: 223 CSSISE 228
+++SE
Sbjct: 177 TAALSE 182
>gi|354611986|ref|ZP_09029938.1| protein of unknown function DUF82 [Halobacterium sp. DL1]
gi|353191564|gb|EHB57070.1| protein of unknown function DUF82 [Halobacterium sp. DL1]
Length = 145
Score = 49.7 bits (117), Expect = 0.004, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 30/166 (18%)
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTS-KEKRVLLTRDAKLLRHQYLI 417
FL D M +A+ LR G DA + E + + + E+R L+TRD L
Sbjct: 3 FLVDAMGGDVARILRMCGHDAVYVLDRGIEDDNAVKRLALDERRTLVTRDRDLAART--- 59
Query: 418 KNQIYRVKSLL-----KNQQLLEV-IEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAV 471
SLL ++QL E+ + LK + + RC CNG P
Sbjct: 60 ------PDSLLLTAKDTDEQLRELAVAGVTLKPAAGE---RCGACNGELESVPQ------ 104
Query: 472 EAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFIDV 517
EAA+ PD + D W+C DC Q +W G+ + N ++ ++
Sbjct: 105 EAAR-----PDYVSDDADTVWRCRDCGQYFWRGSHWTNLERRLEEI 145
>gi|334188034|ref|NP_198440.2| exosome complex exonuclease RRP6 [Arabidopsis thaliana]
gi|160892401|gb|ABX52080.1| RRP6-like protein 2 [Arabidopsis thaliana]
gi|332006642|gb|AED94025.1| exosome complex exonuclease RRP6 [Arabidopsis thaliana]
Length = 870
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I L+E+F P K+ +D+I+L F C++ FD
Sbjct: 321 IGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------G 363
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L E SL + + ++ +KE Q +DW RPL EE YA D H L+ I+++
Sbjct: 364 QASRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDL 423
Query: 212 FQVKV 216
++++
Sbjct: 424 IKLEL 428
>gi|415708748|ref|ZP_11462762.1| ribonuclease D [Gardnerella vaginalis 6420LIT]
gi|415709156|ref|ZP_11462889.1| ribonuclease D [Gardnerella vaginalis 6420B]
gi|388054647|gb|EIK77585.1| ribonuclease D [Gardnerella vaginalis 6420LIT]
gi|388056570|gb|EIK79433.1| ribonuclease D [Gardnerella vaginalis 6420B]
Length = 476
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRGELKKQG 189
>gi|256825389|ref|YP_003149349.1| ribonuclease D [Kytococcus sedentarius DSM 20547]
gi|256688782|gb|ACV06584.1| ribonuclease D [Kytococcus sedentarius DSM 20547]
Length = 431
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + LD++L+KE DWS RPL + YAA+D L+E+ + + + + G
Sbjct: 125 GLAAVVEHYLDLTLAKEHSAVDWSTRPLPTDWLVYAALDVEVLVEVRDAMEADLERLGRD 184
Query: 223 CSSISELDS 231
+ E D+
Sbjct: 185 EWARQEFDA 193
>gi|297243353|ref|ZP_06927286.1| ribonuclease D [Gardnerella vaginalis AMD]
gi|296888600|gb|EFH27339.1| ribonuclease D [Gardnerella vaginalis AMD]
Length = 476
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRGELKKQG 189
>gi|375264824|ref|YP_005022267.1| ribonuclease D [Vibrio sp. EJY3]
gi|369840148|gb|AEX21292.1| ribonuclease D [Vibrio sp. EJY3]
Length = 388
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 36/189 (19%)
Query: 32 SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
+ +V LD E+ R+ +P++ L+QL D +N S++ +L+ + P
Sbjct: 38 ADVVMLDTEFVRIRTF---YPQLGLIQL-----------FDGNNLSLIDPTELTDMS-PF 82
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ ELLK+ +LK+ +DL + F GC P+ + L
Sbjct: 83 V-ELLKD----TSVLKVLHACGEDLEVFQNAF---GC-------TPF---PMVDTQLMAA 124
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
LG L + A + +E L + L K +DW RPLT++Q +YAA D H L+ ++ I
Sbjct: 125 FLGHGL---STGFATLVEEYLGVELDKSESRTDWMARPLTQKQLDYAAADVHYLLPLYEI 181
Query: 212 FQVKVAQKG 220
KV + G
Sbjct: 182 LLDKVTEAG 190
>gi|189184295|ref|YP_001938080.1| ribonuclease D [Orientia tsutsugamushi str. Ikeda]
gi|189181066|dbj|BAG40846.1| ribonuclease D [Orientia tsutsugamushi str. Ikeda]
Length = 210
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPK---ETKSLANICKELLDISLSKELQCSDWSNRPLT 191
++ YL +T N++ + KL + ++ L ++C+ELL I +SK+ Q SDW + LT
Sbjct: 93 IQYYLGVT--LNNIFCTNVASKLVRTYTDSHGLKDLCRELLGIQISKQCQSSDWGGQSLT 150
Query: 192 EEQKNYAAIDAHCLIEIFNIFQ 213
+Q+ YAA D L I NI +
Sbjct: 151 SDQEEYAAKDVVYLHRIKNILE 172
>gi|10176710|dbj|BAB09932.1| nucleolar protein-like [Arabidopsis thaliana]
Length = 834
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I L+E+F P K+ +D+I+L F C++ FD
Sbjct: 284 IGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------G 326
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L E SL + + ++ +KE Q +DW RPL EE YA D H L+ I+++
Sbjct: 327 QASRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDL 386
Query: 212 FQVKV 216
++++
Sbjct: 387 IKLEL 391
>gi|328952034|ref|YP_004369368.1| hypothetical protein Desac_0296 [Desulfobacca acetoxidans DSM
11109]
gi|328452358|gb|AEB08187.1| protein of unknown function DUF82 [Desulfobacca acetoxidans DSM
11109]
Length = 156
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
K L D + LAK LR +G D R + + L TS + LL+R
Sbjct: 2 KLLVDQTLGSLAKWLRIMGFDVEQIRLQPQKLHTL--PTSVKDTYLLSRQTGF--QSKTP 57
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ + V S QL EV +++ ++RC+ CN + PLS VEAA+
Sbjct: 58 RTDLIIVASDRTEDQLEEVCRRLPALLTDWTPLTRCSHCNQLLL--PLS----VEAARD- 110
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQ 506
R+PD + ++ F++C C++++WEG+
Sbjct: 111 -RVPDYVLREHRVFFECPGCHRVFWEGSH 138
>gi|421467515|ref|ZP_15916129.1| hypothetical protein BURMUCF1_3548 [Burkholderia multivorans ATCC
BAA-247]
gi|400233605|gb|EJO63135.1| hypothetical protein BURMUCF1_3548 [Burkholderia multivorans ATCC
BAA-247]
Length = 417
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 33/197 (16%)
Query: 332 EKRLDDI-----------GDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAA 380
E+R+DD G PPP D + +F+ D + GLA+ LR G D
Sbjct: 89 ERRVDDGDRIDVYPERAGGAASAPPP-------DAW-RFVADAHLGGLAQLLRLAGFDTR 140
Query: 381 TPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIEAF 440
+ + E+ +E R++LTRD +LL+ + +++ Y V + +QL E+
Sbjct: 141 YDNHFRDD--EIAALAEREGRIVLTRDRELLKRRAIVRG-CY-VHAQQPAEQLRELFARL 196
Query: 441 QLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQL 500
L Q C +CN + A++AA R+P + ++ +F C C ++
Sbjct: 197 DLA-PHMQPFRLCLRCN--------APLHALDAAAAAPRVPPGVRQRHRRFAACDVCRRV 247
Query: 501 YWEGTQYHNAVQKFIDV 517
+WEG+ + +Q ++
Sbjct: 248 FWEGSHWRR-MQALVEA 263
>gi|392560526|gb|EIW53709.1| ribonuclease H-like protein [Trametes versicolor FP-101664 SS1]
Length = 487
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 32/182 (17%)
Query: 34 LVGLDAEW----KPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL 89
++G D EW + RS S+ R +L+Q+ C +A ++ L+ +S+ +
Sbjct: 134 VMGFDLEWVVLFRKGRSAMSH--RTALVQI-C-------------DARMILLVHVSA--M 175
Query: 90 PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH 149
+ +KEL + DI KLG K D L + ++ +++ ++ +
Sbjct: 176 KKFPQKVKELIENKDIAKLGANIKNDGQKLFRDYGILARNL--------VELGAVARQVD 227
Query: 150 HKQLGRKLPKETKSLANICKELLDISLSK-ELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ + SLA + + +LSK ++ S+W +PL+E QK YAA DAHC + +
Sbjct: 228 -PSFAKAHKRSIVSLAKVVETYTQKTLSKGPVRTSNWETKPLSESQKFYAANDAHCALVV 286
Query: 209 FN 210
+N
Sbjct: 287 YN 288
>gi|170782038|ref|YP_001710370.1| ribonuclease [Clavibacter michiganensis subsp. sepedonicus]
gi|169156606|emb|CAQ01757.1| putative ribonuclease [Clavibacter michiganensis subsp.
sepedonicus]
Length = 443
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 139 LDITSIYN-HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
LD I++ L + LG LP+ L + +ELL I L+KE +DWS RPL Y
Sbjct: 140 LDPQRIFDTELASRLLG--LPR--VGLGTVVEELLGIHLAKEHSAADWSTRPLPRAWLVY 195
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSS 232
AA+D L+++ + ++ ++G + + E ++
Sbjct: 196 AALDVELLVDVRDEIARRLEEQGKTAIAEQEFAAT 230
>gi|406883317|gb|EKD30934.1| hypothetical protein ACD_77C00446G0004 [uncultured bacterium]
Length = 200
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 38/176 (21%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L ++G D E KP S V+LLQL+ GP D++ F+ L+S+
Sbjct: 41 LGNHKIIGFDTETKPVFQANSKRNGVALLQLS---GP------DKA-----FIFRLTSLG 86
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYL--SSTFCSQGCDIGFDRVEPYLDITSIYN 146
+P E L E+ + I+K+G +DL L + F +G ++D+
Sbjct: 87 MP---ESLCEILSTKKIIKVGAAVNEDLRGLLRYTAFVPKG----------FVDL----- 128
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+ +G KS+ + +L + +SK Q S+W L+ Q NYAAIDA
Sbjct: 129 ----QHVGMNWGISEKSVRKMAAIILGVRVSKSQQLSNWEADELSPGQINYAAIDA 180
>gi|415722132|ref|ZP_11469020.1| ribonuclease D [Gardnerella vaginalis 00703Bmash]
gi|388060296|gb|EIK82995.1| ribonuclease D [Gardnerella vaginalis 00703Bmash]
Length = 460
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ ++ ++G
Sbjct: 180 VMSSELKKQG 189
>gi|283458265|ref|YP_003362884.1| ribonuclease D [Rothia mucilaginosa DY-18]
gi|283134299|dbj|BAI65064.1| ribonuclease D [Rothia mucilaginosa DY-18]
Length = 449
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 137 PYLDITSIY-NHLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
P LD+ + N L +LG +L E +L +ELL L+K+ DWS RPL E
Sbjct: 147 PSLDMLGMRPNRLFDTELGARLAGLERVNLGATVEELLGYKLAKKHSKEDWSRRPLPESW 206
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
NYA +D LI++ + + + Q+G ++ E +
Sbjct: 207 LNYALLDVDVLIDLRDALEDLLRQQGKLQYALEEFE 242
>gi|448666863|ref|ZP_21685508.1| hypothetical protein C442_08491 [Haloarcula amylolytica JCM 13557]
gi|445771994|gb|EMA23050.1| hypothetical protein C442_08491 [Haloarcula amylolytica JCM 13557]
Length = 154
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRE-LIDQTSKEKRVLLTRDAKLLRHQYL 416
+ + D M+ LA +LR G D A + E + L+ +E R+++TRD+ L
Sbjct: 9 RLVLDAMLGKLATYLRMCGYDTAYALDRDAEADDDLLALAEREDRLVITRDSDLAARA-- 66
Query: 417 IKNQIYRVKSLLKNQQLLEVIEA-FQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAK 475
+ ++ +++Q L E+ +A F L ++ + + C CNG P+ + VE
Sbjct: 67 -PESVLLIERAVEDQ-LRELADAGFNLSLASEP--AHCGVCNG-----PVEQVDPVEPTP 117
Query: 476 GFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFID 516
+ D + W+C DC Q +W+G+ + +VQ +D
Sbjct: 118 EYAPNTD-----DETVWRCTDCGQYFWKGSHW-ASVQATLD 152
>gi|415723128|ref|ZP_11469302.1| ribonuclease D [Gardnerella vaginalis 00703C2mash]
gi|388063578|gb|EIK86147.1| ribonuclease D [Gardnerella vaginalis 00703C2mash]
Length = 460
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ ++ ++G
Sbjct: 180 VMSSELKKQG 189
>gi|301058394|ref|ZP_07199415.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300447450|gb|EFK11194.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 173
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 350 SLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAK 409
L G +F+ D+M+ LAK LR +G D +P I ++ R+ LTR K
Sbjct: 10 GLKGKNKMRFVADIMLGRLAKWLRVLGFDTLYCSFNPIDP---IVPMARRGRIPLTRQKK 66
Query: 410 LLRHQYLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEE 469
L+ L++ ++ V+ QL ++ +A L+ SRC +CN I +S E
Sbjct: 67 LIS---LLEGGVF-VQYNNVGDQLDQLKKALPLEACHAPWFSRCIRCN--IILMDVSEEA 120
Query: 470 AVEAAKGFQRIPDCLFDKNLQFWQ-CMDCNQLYWEGTQ 506
A + +P+ +F KN++ + C C + +W G+
Sbjct: 121 ARD------NVPEYVFYKNMKSIRFCPGCGRYFWPGSH 152
>gi|356565747|ref|XP_003551099.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 889
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I L+E+F P K+ +D+ +L F C++ FD
Sbjct: 317 IGPYLREIFKDPAKRKVMHGADRDIAWLQRDFGIYICNL-FDT----------------H 359
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q + L E SL +I +++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 360 QASKLLNLERNSLEHILHHFCEVTANKEYQNADWRLRPLPDEMIRYAREDTHYLLYIYDL 419
Query: 212 FQVKV 216
++K+
Sbjct: 420 MRIKL 424
>gi|432098121|gb|ELK28008.1| Exosome component 10 [Myotis davidii]
Length = 876
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 327 FIVD--TLELRSDLYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 369
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE NYA
Sbjct: 370 --LYVVNMFDTHQAARLLNLGRHSLDHLLKHYCNVESNKQYQLADWRIRPLPEEMLNYAR 427
Query: 200 IDAHCLIEIFNIFQVKVAQKGNS 222
D H L+ I++ ++++ ++GN
Sbjct: 428 DDTHYLLYIYDKMRLELWERGNG 450
>gi|83645396|ref|YP_433831.1| ribonuclease D [Hahella chejuensis KCTC 2396]
gi|83633439|gb|ABC29406.1| ribonuclease D [Hahella chejuensis KCTC 2396]
Length = 398
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
V+L+D+ I + W + LF S DILK+ +DL + SQ C +
Sbjct: 66 VYLVDMLKI---TDWSGVSRLFESRDILKVVHACSEDLELFNCVGLSQPCGL-------- 114
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
+D T + N L +L + L ++ ++ L I L K SDW+ RPLT++Q YA
Sbjct: 115 ID-TQVANALLDGEL-------NEGLQSLVRQNLGIELEKHATRSDWTQRPLTDKQIQYA 166
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNL 234
D L ++ + G ++ E ++ L
Sbjct: 167 QEDVVVLWPLYQKLAEALRLSGKYEIALEEGEAMRL 202
>gi|356514039|ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 877
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I L+E+F P K+ +D+++L F C++ FD
Sbjct: 313 IGPYLREIFKDPAKRKVMHGADRDIVWLQRDFGIYICNL-FDT----------------H 355
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q + L E SL +I +++ +KE Q +DW RPL E YA D H L+ I+++
Sbjct: 356 QASKLLNLERNSLEHILHHFCEVTANKEYQNADWRLRPLPNEMLRYAREDTHYLLYIYDL 415
Query: 212 FQVKV 216
++++
Sbjct: 416 MRIRL 420
>gi|350403861|ref|XP_003486927.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Bombus impatiens]
Length = 609
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 32 SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
+ ++G D EW + S VSLLQLA FN V L + I
Sbjct: 83 NDVLGFDCEWVNEGS-------VSLLQLA-----TFN--------GVCGLFRIGKIGY-- 120
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I + LK+L + DILK+G +D + + + GC RV +D+ ++ +
Sbjct: 121 IPQKLKDLLANKDILKVGVASYEDGQKILADY---GC-----RVSSTIDLRTLAARV--- 169
Query: 152 QLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
KLP +SLA + + L + + K E++C +W LT+EQ YAA DA + I+
Sbjct: 170 ----KLP-SPQSLAAMSLQYLGLEMDKLIEIRCGNWDAGTLTDEQVAYAACDAIASVLIY 224
Query: 210 NIFQVKVAQK 219
+ K+ +K
Sbjct: 225 DQITQKMKEK 234
>gi|451998468|gb|EMD90932.1| hypothetical protein COCHEDRAFT_1102884 [Cochliobolus
heterostrophus C5]
Length = 679
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 97/235 (41%), Gaps = 58/235 (24%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
L IH S + E +A+ + +VG D EWKP + + SL+QLAC+
Sbjct: 197 LSIHYCKSFDVAE--RVAQYFLKEKVVGFDIEWKPYGNPHAIKQNASLIQLACE------ 248
Query: 69 PESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSSTFC 124
+ L +S + +L LK + SPD++K+G K D
Sbjct: 249 --------DRIALFHISLFSGYKVEQLMPPSLKAVLESPDVIKVGVAIKGD--------- 291
Query: 125 SQGCDIGFDRVEPYL--------DITSIYNHLH-HKQLGRKLPKETKSLANICKELLDIS 175
F RVE YL +++ ++N + +K K+ SLA + L +
Sbjct: 292 -------FKRVEKYLGVRPQGVFELSRLHNLVEWYKVDPSKVSNRLVSLATQVLQHLQLP 344
Query: 176 LSKELQC------------SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
L K Q SDWS PL +Q +YAA DA+ +++I + K A+
Sbjct: 345 LYKGEQLEDDEDTTSSVRESDWS-LPLNLQQIHYAAADAYAGFRLYHILERKRAR 398
>gi|310287702|ref|YP_003938960.1| ribonuclease D [Bifidobacterium bifidum S17]
gi|309251638|gb|ADO53386.1| Ribonuclease D [Bifidobacterium bifidum S17]
Length = 428
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++ +KE +DWS RPL + +NYAA+D LIE+ Q ++ +G
Sbjct: 132 GLAAVTEHYLGVTFAKEHSAADWSYRPLPRDWRNYAALDVELLIELRRKMQRELKVQGKD 191
Query: 223 CSSISELDSSNLDLGLKGILEKP 245
+ E + L G+ E P
Sbjct: 192 GWADEEFRYA-LQTGMGPRREHP 213
>gi|218129756|ref|ZP_03458560.1| hypothetical protein BACEGG_01335 [Bacteroides eggerthii DSM 20697]
gi|217987866|gb|EEC54191.1| 3'-5' exonuclease [Bacteroides eggerthii DSM 20697]
Length = 210
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ + + E L + ++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVIQTPQEAE--RAVAYLKKCPILGIDSETRPSFTKGQSH-KVALLQVSSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P I K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPIIM-----LLENPGITKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ C + ++ R + +SL I L +SK + S+W
Sbjct: 121 RAC-------------------VELQEYVRTFGIQDRSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LT Q+ YAA DA + I+N Q
Sbjct: 162 EAEMLTPSQQQYAATDAWACLNIYNRLQ 189
>gi|401837803|gb|EJT41675.1| RRP6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 734
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 38/191 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +S + +D E RS+ + V L+Q++ + E D +L+D +I
Sbjct: 229 LKNASEIAVDLEHHDYRSY---YGIVCLMQVSTR-------ERD-------YLVD--TIE 269
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
L +L E+F P I+K+ D+I+L D+G L + +++
Sbjct: 270 LRDALHILNEVFTDPLIVKVFHGAFMDIIWLQR-------DLG-------LYVVGLFDTY 315
Query: 149 H-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIE 207
H K +G LP+ SLA + + + SK+ Q +DW RPL++ YA D H L+
Sbjct: 316 HASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRARPLSKPMTAYARADTHFLLN 371
Query: 208 IFNIFQVKVAQ 218
I++ + K+ +
Sbjct: 372 IYDQLRNKLIE 382
>gi|311742288|ref|ZP_07716097.1| ribonuclease D [Aeromicrobium marinum DSM 15272]
gi|311313916|gb|EFQ83824.1| ribonuclease D [Aeromicrobium marinum DSM 15272]
Length = 411
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+ GR L LA + + L SL+KE +DWS RPL E YAA+D L+E+ +
Sbjct: 129 EHAGRLLNLPRVGLATLVEHFLGRSLAKEHSAADWSTRPLPEPWLVYAALDVEVLVELRD 188
Query: 211 IFQVKVAQKG 220
+ ++ + G
Sbjct: 189 LLDAELREAG 198
>gi|212704372|ref|ZP_03312500.1| hypothetical protein DESPIG_02427 [Desulfovibrio piger ATCC 29098]
gi|212672197|gb|EEB32680.1| 3'-5' exonuclease [Desulfovibrio piger ATCC 29098]
Length = 201
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 81/202 (40%), Gaps = 43/202 (21%)
Query: 3 CTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLAC 61
C Y P IHLV S E ++ L Q ++G D E +P R + N P SL+QLA
Sbjct: 21 CHYEGP--IHLVRSLE--DWEKALPDLQQEQVLGFDTETRPSFRKGRVNTP--SLVQLA- 73
Query: 62 QPGPRFNPESDESNASVVFLLDLSSIPL-PSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
A V+L+ LS P P L L P ++K G D+ L+
Sbjct: 74 -------------TARAVYLVQLSWWPFGPE----LAGLLADPAVIKAGVAIGDDMRELA 116
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKEL 180
+ + + +D+ + R T+ L + L +SK
Sbjct: 117 RLYPFKPAGM--------VDLGMV---------ARAHQLTTQGLRTLAANLFGQRISKGP 159
Query: 181 QCSDWSNRPLTEEQKNYAAIDA 202
QCS+WS L++ Q YAA DA
Sbjct: 160 QCSNWSVMELSKRQVIYAATDA 181
>gi|262193925|ref|YP_003265134.1| 3'-5' exonuclease [Haliangium ochraceum DSM 14365]
gi|262077272|gb|ACY13241.1| 3'-5' exonuclease [Haliangium ochraceum DSM 14365]
Length = 925
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 139 LDITSIYNHLHHKQLGRKLPKET-KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
+DI ++++ L + R +E L +C L L K Q SDW+ RPLT+ Q +Y
Sbjct: 844 MDIENVFDTLKVSRRLRGRKREGGHGLGAVCARELGRELDKHEQRSDWTQRPLTQRQLDY 903
Query: 198 AAIDAHCLIEIFNIF 212
AA+DA L+ + F
Sbjct: 904 AALDAEVLLALHERF 918
>gi|145594075|ref|YP_001158372.1| 3'-5' exonuclease [Salinispora tropica CNB-440]
gi|145303412|gb|ABP53994.1| 3'-5' exonuclease [Salinispora tropica CNB-440]
Length = 451
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + + LL SL K +DWS+RPL E YAA+D L+E+ + ++ ++
Sbjct: 170 ERVGLAALTENLLGFSLEKHHSAADWSSRPLPESWLTYAALDVELLVELRDALDAELTRQ 229
Query: 220 G 220
G
Sbjct: 230 G 230
>gi|359773330|ref|ZP_09276728.1| putative ribonuclease, partial [Gordonia effusa NBRC 100432]
gi|359309527|dbj|GAB19506.1| putative ribonuclease, partial [Gordonia effusa NBRC 100432]
Length = 427
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + L + L+K +DWS RPL + NYAA+D L+E+
Sbjct: 143 GRLLGLPRVNLAAMIAHFLGLGLAKGHGAADWSRRPLPADWLNYAALDVEVLVELREAIA 202
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFK 255
++A G S + E D +L +P +T R++
Sbjct: 203 DELAATGKSDWAAQEFDY---------VLHRPPSPPRTDRWR 235
>gi|169630071|ref|YP_001703720.1| hypothetical protein MAB_2988 [Mycobacterium abscessus ATCC 19977]
gi|420910597|ref|ZP_15373909.1| ribonuclease III [Mycobacterium abscessus 6G-0125-R]
gi|420917049|ref|ZP_15380353.1| ribonuclease III [Mycobacterium abscessus 6G-0125-S]
gi|420922214|ref|ZP_15385511.1| ribonuclease III [Mycobacterium abscessus 6G-0728-S]
gi|420927876|ref|ZP_15391158.1| ribonuclease III [Mycobacterium abscessus 6G-1108]
gi|420967485|ref|ZP_15430689.1| ribonuclease III [Mycobacterium abscessus 3A-0810-R]
gi|420978216|ref|ZP_15441394.1| ribonuclease III [Mycobacterium abscessus 6G-0212]
gi|420983601|ref|ZP_15446768.1| ribonuclease III [Mycobacterium abscessus 6G-0728-R]
gi|421007806|ref|ZP_15470917.1| ribonuclease III [Mycobacterium abscessus 3A-0119-R]
gi|421013569|ref|ZP_15476650.1| ribonuclease III [Mycobacterium abscessus 3A-0122-R]
gi|421018518|ref|ZP_15481576.1| ribonuclease III [Mycobacterium abscessus 3A-0122-S]
gi|421025191|ref|ZP_15488235.1| ribonuclease III [Mycobacterium abscessus 3A-0731]
gi|421029834|ref|ZP_15492866.1| ribonuclease III [Mycobacterium abscessus 3A-0930-R]
gi|421035103|ref|ZP_15498123.1| ribonuclease III [Mycobacterium abscessus 3A-0930-S]
gi|169242038|emb|CAM63066.1| Conserved hypothetical protein (putative exonuclease)
[Mycobacterium abscessus]
gi|392112591|gb|EIU38360.1| ribonuclease III [Mycobacterium abscessus 6G-0125-R]
gi|392121189|gb|EIU46955.1| ribonuclease III [Mycobacterium abscessus 6G-0125-S]
gi|392132050|gb|EIU57796.1| ribonuclease III [Mycobacterium abscessus 6G-0728-S]
gi|392135109|gb|EIU60850.1| ribonuclease III [Mycobacterium abscessus 6G-1108]
gi|392166490|gb|EIU92175.1| ribonuclease III [Mycobacterium abscessus 6G-0212]
gi|392168597|gb|EIU94275.1| ribonuclease III [Mycobacterium abscessus 6G-0728-R]
gi|392199259|gb|EIV24869.1| ribonuclease III [Mycobacterium abscessus 3A-0119-R]
gi|392201917|gb|EIV27515.1| ribonuclease III [Mycobacterium abscessus 3A-0122-R]
gi|392208393|gb|EIV33967.1| ribonuclease III [Mycobacterium abscessus 3A-0122-S]
gi|392211988|gb|EIV37554.1| ribonuclease III [Mycobacterium abscessus 3A-0731]
gi|392224586|gb|EIV50106.1| ribonuclease III [Mycobacterium abscessus 3A-0930-R]
gi|392225835|gb|EIV51350.1| ribonuclease III [Mycobacterium abscessus 3A-0930-S]
gi|392249992|gb|EIV75466.1| ribonuclease III [Mycobacterium abscessus 3A-0810-R]
Length = 400
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA++ LL + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 125 GRLAGFEKVNLASMVHRLLGLGLAKGHGAADWSKRPLPDDWLNYAALDVEVLVELRDKIA 184
Query: 214 VKVAQKGNS 222
+A++G +
Sbjct: 185 EVLAEQGKT 193
>gi|172054918|ref|YP_001806245.1| DNA polymerase I-like protein [Cyanothece sp. ATCC 51142]
gi|354555333|ref|ZP_08974635.1| DNA-directed DNA polymerase [Cyanothece sp. ATCC 51472]
gi|171701199|gb|ACB54179.1| DNA polymerase I-like protein [Cyanothece sp. ATCC 51142]
gi|353552924|gb|EHC22318.1| DNA-directed DNA polymerase [Cyanothece sp. ATCC 51472]
Length = 662
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 87/215 (40%), Gaps = 46/215 (21%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
+ L ++VGLD E H S +SL+Q+A P V L++
Sbjct: 61 KELETHTVVGLDIETTGLDPHTS---EISLIQIAAPNRP-------------VILIEFRG 104
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--------------STFCSQGCDIGF 132
I + E L+ P I K+G ++ +L+ + SQ G
Sbjct: 105 I---TNKETLRRFIEHPKIPKVGHNLAFEIQFLTKHLGINPAKTAWIDTMLMSQLLAAGL 161
Query: 133 ---------DRVEPYLDIT-SIYNHLHHKQ-LGRKLPKETKSLANICKELLDISLSKELQ 181
V P D+T SI N KQ L R LP + SL + L SL K LQ
Sbjct: 162 PPTLEEDAKTGVLPIPDLTRSIKNKKKLKQELNRNLPG-SYSLMRVVARELGYSLDKSLQ 220
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
SDW +PLT+EQ YAA DA ++ + + K+
Sbjct: 221 VSDWG-KPLTQEQLQYAANDAAVVLPLREALRNKI 254
>gi|443289631|ref|ZP_21028725.1| 3'-5' exonuclease [Micromonospora lupini str. Lupac 08]
gi|385887246|emb|CCH16799.1| 3'-5' exonuclease [Micromonospora lupini str. Lupac 08]
Length = 441
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + ++LL +L K +DWS+RPL E YAA+D L ++ + ++ ++
Sbjct: 162 ERVGLAALTEQLLGFTLEKHHSAADWSSRPLPESWLTYAALDVEMLTDLRDALDAELTRQ 221
Query: 220 GNSCSSISEL 229
G S + E
Sbjct: 222 GKSAWAAEEF 231
>gi|377562762|ref|ZP_09792130.1| ribonuclease D [Gordonia sputi NBRC 100414]
gi|377530059|dbj|GAB37295.1| ribonuclease D [Gordonia sputi NBRC 100414]
Length = 426
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L + +LA + L++ L K +DWS RPL ++ NYAA+D L+E+ + Q
Sbjct: 132 GRLLGEPKVNLAAMVATYLELGLQKGHGAADWSRRPLPDDWLNYAALDVEVLVELRDAVQ 191
Query: 214 VKVAQKG 220
+ ++G
Sbjct: 192 QALVEQG 198
>gi|365870911|ref|ZP_09410452.1| hypothetical protein MMAS_28540 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|397679858|ref|YP_006521393.1| ribonuclease D [Mycobacterium massiliense str. GO 06]
gi|414584634|ref|ZP_11441774.1| ribonuclease III [Mycobacterium abscessus 5S-1215]
gi|418247873|ref|ZP_12874259.1| 3'-5' exonuclease [Mycobacterium abscessus 47J26]
gi|420878742|ref|ZP_15342109.1| ribonuclease III [Mycobacterium abscessus 5S-0304]
gi|420885673|ref|ZP_15349033.1| ribonuclease III [Mycobacterium abscessus 5S-0421]
gi|420889577|ref|ZP_15352925.1| ribonuclease III [Mycobacterium abscessus 5S-0422]
gi|420896274|ref|ZP_15359613.1| ribonuclease III [Mycobacterium abscessus 5S-0708]
gi|420899545|ref|ZP_15362877.1| ribonuclease III [Mycobacterium abscessus 5S-0817]
gi|420906083|ref|ZP_15369401.1| ribonuclease III [Mycobacterium abscessus 5S-1212]
gi|420932091|ref|ZP_15395366.1| ribonuclease III [Mycobacterium massiliense 1S-151-0930]
gi|420938975|ref|ZP_15402244.1| ribonuclease III [Mycobacterium massiliense 1S-152-0914]
gi|420942348|ref|ZP_15405605.1| ribonuclease III [Mycobacterium massiliense 1S-153-0915]
gi|420946622|ref|ZP_15409872.1| ribonuclease III [Mycobacterium massiliense 1S-154-0310]
gi|420952608|ref|ZP_15415852.1| ribonuclease III [Mycobacterium massiliense 2B-0626]
gi|420956777|ref|ZP_15420014.1| ribonuclease III [Mycobacterium massiliense 2B-0107]
gi|420961845|ref|ZP_15425070.1| ribonuclease III [Mycobacterium massiliense 2B-1231]
gi|420972953|ref|ZP_15436146.1| ribonuclease III [Mycobacterium abscessus 5S-0921]
gi|420992736|ref|ZP_15455883.1| ribonuclease III [Mycobacterium massiliense 2B-0307]
gi|420998587|ref|ZP_15461724.1| ribonuclease III [Mycobacterium massiliense 2B-0912-R]
gi|421003024|ref|ZP_15466148.1| ribonuclease III [Mycobacterium massiliense 2B-0912-S]
gi|421049988|ref|ZP_15512982.1| ribonuclease III [Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|353452366|gb|EHC00760.1| 3'-5' exonuclease [Mycobacterium abscessus 47J26]
gi|363994714|gb|EHM15932.1| hypothetical protein MMAS_28540 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392081436|gb|EIU07262.1| ribonuclease III [Mycobacterium abscessus 5S-0421]
gi|392083651|gb|EIU09476.1| ribonuclease III [Mycobacterium abscessus 5S-0304]
gi|392087325|gb|EIU13147.1| ribonuclease III [Mycobacterium abscessus 5S-0422]
gi|392095586|gb|EIU21381.1| ribonuclease III [Mycobacterium abscessus 5S-0708]
gi|392100892|gb|EIU26683.1| ribonuclease III [Mycobacterium abscessus 5S-0817]
gi|392103987|gb|EIU29773.1| ribonuclease III [Mycobacterium abscessus 5S-1212]
gi|392119786|gb|EIU45554.1| ribonuclease III [Mycobacterium abscessus 5S-1215]
gi|392136850|gb|EIU62587.1| ribonuclease III [Mycobacterium massiliense 1S-151-0930]
gi|392144490|gb|EIU70215.1| ribonuclease III [Mycobacterium massiliense 1S-152-0914]
gi|392149775|gb|EIU75489.1| ribonuclease III [Mycobacterium massiliense 1S-153-0915]
gi|392153652|gb|EIU79358.1| ribonuclease III [Mycobacterium massiliense 1S-154-0310]
gi|392157920|gb|EIU83617.1| ribonuclease III [Mycobacterium massiliense 2B-0626]
gi|392165845|gb|EIU91531.1| ribonuclease III [Mycobacterium abscessus 5S-0921]
gi|392185520|gb|EIV11169.1| ribonuclease III [Mycobacterium massiliense 2B-0307]
gi|392186399|gb|EIV12046.1| ribonuclease III [Mycobacterium massiliense 2B-0912-R]
gi|392194482|gb|EIV20102.1| ribonuclease III [Mycobacterium massiliense 2B-0912-S]
gi|392238591|gb|EIV64084.1| ribonuclease III [Mycobacterium massiliense CCUG 48898]
gi|392249310|gb|EIV74785.1| ribonuclease III [Mycobacterium massiliense 2B-1231]
gi|392253676|gb|EIV79144.1| ribonuclease III [Mycobacterium massiliense 2B-0107]
gi|395458123|gb|AFN63786.1| Ribonuclease D [Mycobacterium massiliense str. GO 06]
Length = 400
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA++ LL + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 125 GRLAGFEKVNLASMVHRLLGLGLAKGHGAADWSKRPLPDDWLNYAALDVEVLVELRDKIA 184
Query: 214 VKVAQKGNS 222
+A++G +
Sbjct: 185 EVLAEQGKT 193
>gi|432887992|ref|XP_004075013.1| PREDICTED: probable exonuclease mut-7 homolog [Oryzias latipes]
Length = 762
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 22/128 (17%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D YR PL ++H V + E+ + + L + +VG+D EW+P S +V+L+Q
Sbjct: 427 DKFYRVPLTKDQVHFVNTPEALQKCG-STLLKKGGVVGVDMEWQPTFGCTSA-QQVALIQ 484
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPL---PSIWELLKELFVSPDILKLGFKFKQD 115
LA Q VFLLDL + P ++ F PDILKLG+ D
Sbjct: 485 LAVQ--------------DQVFLLDLCAREFCQHPGTVRFIRTFFSDPDILKLGYGMSGD 530
Query: 116 LIYLSSTF 123
L L +T+
Sbjct: 531 LKSLRATW 538
>gi|328767973|gb|EGF78021.1| hypothetical protein BATDEDRAFT_27210 [Batrachochytrium
dendrobatidis JAM81]
Length = 826
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
FL+D ++ L + L F +P I+K+ + D+ +L F D+ FD
Sbjct: 298 FLVD--TLILRNSLHALNTSFANPQIVKVFHGAEMDIQWLQRDFGVYVVDL-FD------ 348
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
Y+ H +L E SLA + K D+ K Q +DW RPL +E +YA
Sbjct: 349 ----TYHASHALEL------EGHSLAFLLKYYCDVVTDKRYQLADWRIRPLPKEMVHYAR 398
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
+D H L+ IF+ + ++ K N
Sbjct: 399 MDTHYLLYIFDRMRNELLNKSN 420
>gi|108799177|ref|YP_639374.1| 3'-5' exonuclease [Mycobacterium sp. MCS]
gi|119868292|ref|YP_938244.1| 3'-5' exonuclease [Mycobacterium sp. KMS]
gi|126434785|ref|YP_001070476.1| 3'-5' exonuclease [Mycobacterium sp. JLS]
gi|108769596|gb|ABG08318.1| 3'-5' exonuclease [Mycobacterium sp. MCS]
gi|119694381|gb|ABL91454.1| 3'-5' exonuclease [Mycobacterium sp. KMS]
gi|126234585|gb|ABN97985.1| 3'-5' exonuclease [Mycobacterium sp. JLS]
Length = 428
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 148 LHHKQLGRKLPKETK-SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
L+ +L +L + +LA + ELL + L K +DWS RPL ++ NYAA+D L+
Sbjct: 138 LYDTELAGRLAGLARVNLATMVSELLGLQLMKGHGAADWSKRPLPDDWLNYAALDVEVLL 197
Query: 207 EIFNIFQVKVAQKGNSCSSISELD 230
E+ + + +G + +I E +
Sbjct: 198 ELRDAVAAVLDDQGKTDWAIQEFE 221
>gi|91787516|ref|YP_548468.1| hypothetical protein Bpro_1634 [Polaromonas sp. JS666]
gi|91696741|gb|ABE43570.1| protein of unknown function DUF82 [Polaromonas sp. JS666]
Length = 251
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D + E E I +++ R++LTRD LL+ + I
Sbjct: 103 RFVADAHLGGLAHLLRMAGFDTLYDNHFRDEEIERI--AAEQGRIVLTRDRDLLKRR-TI 159
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L QL E+ L S + C CN PL A+E +
Sbjct: 160 THGCY-VHALRTELQLREIFGRLDLARSARPF-TLCLHCNA-----PL---HAIEKMRVA 209
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQY 507
+P + + +F C C++++WEG+ +
Sbjct: 210 TMLPPQVREHYQRFSACDVCHRVFWEGSHW 239
>gi|419709773|ref|ZP_14237241.1| 3'-5' exonuclease [Mycobacterium abscessus M93]
gi|419716748|ref|ZP_14244143.1| 3'-5' exonuclease [Mycobacterium abscessus M94]
gi|420864384|ref|ZP_15327774.1| ribonuclease III [Mycobacterium abscessus 4S-0303]
gi|420869175|ref|ZP_15332557.1| ribonuclease III [Mycobacterium abscessus 4S-0726-RA]
gi|420873619|ref|ZP_15336996.1| ribonuclease III [Mycobacterium abscessus 4S-0726-RB]
gi|420989830|ref|ZP_15452986.1| ribonuclease III [Mycobacterium abscessus 4S-0206]
gi|421040139|ref|ZP_15503148.1| ribonuclease III [Mycobacterium abscessus 4S-0116-R]
gi|421043974|ref|ZP_15506975.1| ribonuclease III [Mycobacterium abscessus 4S-0116-S]
gi|382940309|gb|EIC64633.1| 3'-5' exonuclease [Mycobacterium abscessus M94]
gi|382943654|gb|EIC67968.1| 3'-5' exonuclease [Mycobacterium abscessus M93]
gi|392068645|gb|EIT94492.1| ribonuclease III [Mycobacterium abscessus 4S-0726-RA]
gi|392071359|gb|EIT97205.1| ribonuclease III [Mycobacterium abscessus 4S-0303]
gi|392072647|gb|EIT98488.1| ribonuclease III [Mycobacterium abscessus 4S-0726-RB]
gi|392184109|gb|EIV09760.1| ribonuclease III [Mycobacterium abscessus 4S-0206]
gi|392225231|gb|EIV50750.1| ribonuclease III [Mycobacterium abscessus 4S-0116-R]
gi|392237826|gb|EIV63320.1| ribonuclease III [Mycobacterium abscessus 4S-0116-S]
Length = 400
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA++ LL + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 125 GRLAGFEKVNLASMVHRLLGLGLAKGHGAADWSKRPLPDDWLNYAALDVEVLVELRDKIA 184
Query: 214 VKVAQKGNS 222
+A++G +
Sbjct: 185 EVLAEQGKT 193
>gi|290475404|ref|YP_003468292.1| RNase D, processes tRNA [Xenorhabdus bovienii SS-2004]
gi|289174725|emb|CBJ81524.1| RNase D, processes tRNA precursor [Xenorhabdus bovienii SS-2004]
Length = 385
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 38/189 (20%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
+ + LD E+ R++ +P++ L+QL D S++ LD+S
Sbjct: 33 ATIALDTEFVRTRTY---YPQLGLIQL-----------FDGEQLSLIDPLDISE------ 72
Query: 93 WELLKELFVSPDILKLGFKFKQDL-IYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
W+ +EL D+LK +DL ++ +S C P +D + + H
Sbjct: 73 WQPFRELLTDRDVLKFIHAGSEDLEVFWNSFQCLP---------TPMIDTQVLAAFIGHP 123
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
+ A + + L + L K +DW RPL+E+Q YAA D + L+ + +I
Sbjct: 124 M--------SCGFATLVAQYLHVELDKSESRTDWLARPLSEKQCEYAAADVYYLLPLADI 175
Query: 212 FQVKVAQKG 220
Q G
Sbjct: 176 LMAATEQAG 184
>gi|290989778|ref|XP_002677514.1| predicted protein [Naegleria gruberi]
gi|284091122|gb|EFC44770.1| predicted protein [Naegleria gruberi]
Length = 335
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 337 DIGDWQGPPPWDLSLG----GDGYPKFLCDVMVEGLAKHLRCVGIDA 379
DI + GP D SL DG PKF+CD + G+AKHLR +GID
Sbjct: 77 DIENVNGPNNLDYSLDEVPVDDGEPKFVCDTTIPGVAKHLRMLGIDT 123
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 379 AATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLLKNQQLLEVIE 438
+TP +K E +E I QT E+ + D +L + Y + Y +K+ + Q+ EV+
Sbjct: 197 TSTPYNKWKETKEKI-QTRIEQYEMDLSDP-ILSYPY----KYYLLKTKGRYNQINEVVN 250
Query: 439 AFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCN 498
F+++ +++ +RC C+G + P +E V+ + ++ N + C C
Sbjct: 251 TFKIRYIPEKMFTRCASCSGTLRKIP--NKEEVK-----HLLEQNTYNDNDHYSMCNRCK 303
Query: 499 QLYW----EGTQYHNAVQKFIDVCK 519
QL+W E AV+K I C+
Sbjct: 304 QLFWGIHIENPAQREAVEKAIAFCE 328
>gi|269956679|ref|YP_003326468.1| 3'-5' exonuclease [Xylanimonas cellulosilytica DSM 15894]
gi|269305360|gb|ACZ30910.1| 3'-5' exonuclease [Xylanimonas cellulosilytica DSM 15894]
Length = 420
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L E LA + + L + L+KE DWS RPL + YAA+D L E+ ++
Sbjct: 140 RLLGLERVGLAAVVADTLGLGLAKEHSAVDWSTRPLPVDWLRYAALDVEVLGEVRDVLAE 199
Query: 215 KVAQKGNSCSSISELDS 231
++A G S + E ++
Sbjct: 200 RLADAGKSEWAAQEFEA 216
>gi|453077526|ref|ZP_21980272.1| ribonuclease D [Rhodococcus triatomae BKS 15-14]
gi|452759201|gb|EME17574.1| ribonuclease D [Rhodococcus triatomae BKS 15-14]
Length = 399
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + LL + L K DWS RPL E NYAA+D L+E+ + ++ +G +
Sbjct: 112 GLAAVVERLLGLELQKGHGADDWSRRPLPESWLNYAALDVEVLVELRDAMAAELDSQGKT 171
Query: 223 CSSISELDSSNLDLGLKGILEKPDIGNKTVRF-------------KLCEALDIIRATSYY 269
+ E + L K KPD +T + +L A D I A
Sbjct: 172 DWAAQEFEHIRLAGPPK---PKPDRWRRTSQIHSLKSPRQLAAVRELWRARDEIAARRDI 228
Query: 270 S--QCLPEGVVSRVSYLNTMPMD 290
+ + LP+ ++ + N M +D
Sbjct: 229 APGRILPDSAITAAAAANPMSVD 251
>gi|400601943|gb|EJP69568.1| 3'-5' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 802
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH-KQ 152
E+L E F P I+K+ D+++L D+G L + +++ +Q
Sbjct: 285 EILNEAFADPSIIKVFHGAYMDMVWLQR-------DLG-------LYVNGLFDTFFACEQ 330
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG +SLA + + D K+ Q +DW RP+ EE YA D H L+ I++
Sbjct: 331 LGYS----GRSLAFLLSKFADFDADKQYQLADWRIRPIPEEMLYYARSDTHYLLHIYDQV 386
Query: 213 QVKVAQKGNSCSSISEL 229
+ + N + +L
Sbjct: 387 RNDLVSSSNRSAPEQDL 403
>gi|365758455|gb|EHN00296.1| Rrp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 734
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 38/191 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +S + +D E RS+ + V L+Q++ + E D +L+D +I
Sbjct: 229 LKNASEIAVDLEHHDYRSY---YGIVCLMQVSTR-------ERD-------YLVD--TIE 269
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
L +L E+F P I+K+ D+I+L D+G L + +++
Sbjct: 270 LRDALHILNEVFTDPLIVKVFHGAFMDIIWLQR-------DLG-------LYVVGLFDTY 315
Query: 149 H-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIE 207
H K +G LP+ SLA + + + SK+ Q +DW RPL++ YA D H L+
Sbjct: 316 HASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRARPLSKPMTAYARADTHFLLN 371
Query: 208 IFNIFQVKVAQ 218
I++ + K+ +
Sbjct: 372 IYDQLRNKLIE 382
>gi|330835776|ref|YP_004410504.1| hypothetical protein Mcup_1918 [Metallosphaera cuprina Ar-4]
gi|329567915|gb|AEB96020.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4]
Length = 166
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 43/169 (25%)
Query: 356 YPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQ- 414
Y KF+ D M+ LA+ LR +G D T K E ++I E R++LTRD L +
Sbjct: 3 YRKFIADAMLGKLARWLRILGYD--TLYFKDSEDWKIIKIAKNENRIILTRDRALCKKAE 60
Query: 415 --------YLIKNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLS 466
L ++I +V LL + L+++ D SRC++CNG ++K
Sbjct: 61 KSSIDCFVVLPDDEIEKVLFLLSKKY------GIVLEVNPDS--SRCSECNG-VLEK--- 108
Query: 467 TEEAVEAAKGFQRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHNAVQKFI 515
DKN W+C C + YW+G + + I
Sbjct: 109 ------------------LDKNR--WRCTKCKKEYWKGKHWETITEILI 137
>gi|117928598|ref|YP_873149.1| 3'-5' exonuclease [Acidothermus cellulolyticus 11B]
gi|117649061|gb|ABK53163.1| 3'-5' exonuclease [Acidothermus cellulolyticus 11B]
Length = 416
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + +ELL L+K+ DWS RPL E YAA+D L+E+ I ++ ++G
Sbjct: 133 GLAAMVEELLGFRLNKDHARVDWSRRPLPESWLRYAALDVEVLVELREILHTELQRQGKL 192
Query: 223 CSSISELD 230
++ E +
Sbjct: 193 RWAVEEFE 200
>gi|451855365|gb|EMD68657.1| hypothetical protein COCSADRAFT_157073 [Cochliobolus sativus
ND90Pr]
Length = 791
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F P ILK+ D+++L D+G L I +++ H
Sbjct: 278 ECLNEVFADPSILKVLHGAYMDIMWLQR-------DLG-------LYIVGLFDTYH---A 320
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLA + + + + K+ Q +DW RPL+ E YA D H L+ I++ +
Sbjct: 321 ARALGYPGASLAYLLERHVKFTAQKQYQLADWRIRPLSPELFEYARADTHFLLYIYDNMR 380
Query: 214 VKVAQKGN 221
++ +K +
Sbjct: 381 NELVEKSD 388
>gi|406606562|emb|CCH42061.1| exosome complex exonuclease [Wickerhamomyces ciferrii]
Length = 744
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH-HKQ 152
++L +F P I K+ D+I+L D+G L I S+++ H +Q
Sbjct: 279 KILNSVFTDPKITKVFHGAFMDIIWLQR-------DLG-------LYIVSLFDTYHASRQ 324
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
LG PK SLA + + SK+ Q +DW RPLT K YA D H L+ IF+
Sbjct: 325 LG--FPKH--SLAYLLERFAHFKTSKKYQLADWRIRPLTGPMKLYARSDTHFLLNIFD 378
>gi|398877188|ref|ZP_10632336.1| hypothetical protein PMI33_02024 [Pseudomonas sp. GM67]
gi|398202915|gb|EJM89747.1| hypothetical protein PMI33_02024 [Pseudomonas sp. GM67]
Length = 246
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLI 417
+F+ D + GLA LR G D T E E+ + +++ R++LTRD +LL+ + +I
Sbjct: 97 RFVADAHLGGLANLLRMSGFD--TLYDNGFEDGEIAEIAAQQGRIVLTRDRELLKRR-II 153
Query: 418 KNQIYRVKSLLKNQQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAVEAAKGF 477
+ Y V +L + QL E+ E L S + S C CN PL E + E A+
Sbjct: 154 SHGCY-VHALKPSLQLRELYERLDLARSA-RPFSLCLHCN-----LPLH-EISPELAR-- 203
Query: 478 QRIPDCLFDKNLQFWQCMDCNQLYWEGTQYHN 509
++P + F +C C ++YW+G+ + +
Sbjct: 204 PQVPPRVGALYSHFLRCDACQRIYWKGSHWRS 235
>gi|357146328|ref|XP_003573952.1| PREDICTED: exosome component 10-like [Brachypodium distachyon]
Length = 906
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ E L+E+F P K+ +D+I+L F C++ FD
Sbjct: 326 LGENLREVFQDPTKKKVMHGAGRDIIWLQRDFGIYVCNL-FDT----------------G 368
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L + SL ++ + +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 369 QASRILQMDRNSLEHLLHHFCGVVANKEYQSADWRLRPLPDEMTKYAREDTHYLLYIYDL 428
Query: 212 FQVKVAQK 219
++++ +
Sbjct: 429 MRLRLVNE 436
>gi|118618645|ref|YP_906977.1| hypothetical protein MUL_3315 [Mycobacterium ulcerans Agy99]
gi|183982048|ref|YP_001850339.1| hypothetical protein MMAR_2035 [Mycobacterium marinum M]
gi|443490446|ref|YP_007368593.1| ribonuclease D [Mycobacterium liflandii 128FXT]
gi|118570755|gb|ABL05506.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|183175374|gb|ACC40484.1| conserved hypothetical protein [Mycobacterium marinum M]
gi|442582943|gb|AGC62086.1| ribonuclease D [Mycobacterium liflandii 128FXT]
Length = 435
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR + +LA + + LL + L K +DWS RPL + NYAA+D LIE+ +
Sbjct: 139 GRLAGYDRVNLATMVERLLGMGLVKGHGAADWSKRPLPSDWLNYAALDVELLIELRSAIS 198
Query: 214 VKVAQKGNSCSSISELD 230
+A++G S + E +
Sbjct: 199 GVLAEQGKSDWAAQEFE 215
>gi|433603682|ref|YP_007036051.1| 3'-5' exonuclease [Saccharothrix espanaensis DSM 44229]
gi|407881535|emb|CCH29178.1| 3'-5' exonuclease [Saccharothrix espanaensis DSM 44229]
Length = 428
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +L + + LL L K +DWS RPL + NYAA+D L+E+ ++ +
Sbjct: 131 GRLAGFERVALGTLVERLLGYRLEKGHGAADWSRRPLPADWLNYAALDVELLVELRDVLE 190
Query: 214 VKVAQKGNSCSSISELDSSN 233
++ ++G ++ E +++
Sbjct: 191 AELKKQGKLEWALEEFEAAR 210
>gi|402496589|ref|YP_006555849.1| 3'-5' exonuclease [Wolbachia endosymbiont of Onchocerca ochengi]
gi|398649862|emb|CCF78032.1| 3'-5' exonuclease [Wolbachia endosymbiont of Onchocerca ochengi]
Length = 206
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAID 201
+ SL +C ELLDI L+K+ Q SDW + LT++QKNYAA D
Sbjct: 113 DNHSLKELCLELLDIKLNKQQQSSDWGSESLTDKQKNYAASD 154
>gi|379709831|ref|YP_005265036.1| putative RNase D [Nocardia cyriacigeorgica GUH-2]
gi|374847330|emb|CCF64400.1| putative RNase D [Nocardia cyriacigeorgica GUH-2]
Length = 446
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 147 HLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
L +LG +L + LA + + LL +L K +DWS RPL E NYAA+D L
Sbjct: 139 RLFDTELGGRLAGFDRVGLAAMVERLLGRALRKGHGAADWSTRPLPEAWLNYAALDVELL 198
Query: 206 IEIFNIFQVKVAQKGNSCSSISELDSSNL 234
+E+ + + Q+G + + E + L
Sbjct: 199 LELRESVAIALHQQGKTEWAAQEFEHVRL 227
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,021,699,167
Number of Sequences: 23463169
Number of extensions: 333178446
Number of successful extensions: 771725
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 1294
Number of HSP's that attempted gapping in prelim test: 768226
Number of HSP's gapped (non-prelim): 3296
length of query: 522
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 375
effective length of database: 8,910,109,524
effective search space: 3341291071500
effective search space used: 3341291071500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)