Query 009956
Match_columns 521
No_of_seqs 231 out of 2284
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 16:41:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009956.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009956hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2exr_A Cytokinin dehydrogenase 100.0 4.5E-66 1.5E-70 552.5 45.3 479 32-517 36-523 (524)
2 1w1o_A Cytokinin dehydrogenase 100.0 2E-62 6.8E-67 527.1 42.3 484 21-515 32-534 (534)
3 3pm9_A Putative oxidoreductase 100.0 3.5E-64 1.2E-68 530.5 19.7 426 20-513 15-476 (476)
4 4bby_A Alkyldihydroxyacetoneph 100.0 2.4E-59 8.1E-64 513.4 26.2 461 13-513 155-658 (658)
5 2uuu_A Alkyldihydroxyacetoneph 100.0 4.9E-55 1.7E-59 470.7 29.5 458 13-513 85-584 (584)
6 1e8g_A Vanillyl-alcohol oxidas 100.0 2.4E-52 8.2E-57 450.2 34.7 439 25-515 26-549 (560)
7 1wvf_A 4-cresol dehydrogenase 100.0 2.6E-52 8.9E-57 447.1 28.0 443 26-516 23-516 (520)
8 1f0x_A DLDH, D-lactate dehydro 100.0 3.9E-52 1.3E-56 445.0 19.8 436 23-519 12-566 (571)
9 3tsh_A Pollen allergen PHL P 4 100.0 4.1E-42 1.4E-46 366.6 37.8 229 20-256 9-249 (500)
10 3rja_A Carbohydrate oxidase; p 100.0 4.9E-42 1.7E-46 362.1 32.9 227 23-257 3-234 (473)
11 3vte_A Tetrahydrocannabinolic 100.0 2.2E-41 7.4E-46 358.5 33.9 225 26-257 10-250 (518)
12 3fw9_A Reticuline oxidase; BI- 100.0 4.6E-41 1.6E-45 355.3 33.9 443 26-515 5-493 (495)
13 2bvf_A 6-hydroxy-D-nicotine ox 100.0 4E-40 1.4E-44 347.6 39.9 221 30-257 10-234 (459)
14 3pop_A GILR oxidase; FAD bindi 100.0 3.7E-40 1.3E-44 349.2 32.1 207 31-244 7-234 (501)
15 2y3s_A TAML; oxidoreductase; H 100.0 2.9E-38 1E-42 337.4 38.0 205 33-244 33-260 (530)
16 1zr6_A Glucooligosaccharide ox 100.0 7.1E-39 2.4E-43 340.9 32.1 213 35-254 19-234 (503)
17 2ipi_A Aclacinomycin oxidoredu 100.0 2.7E-38 9.3E-43 337.6 34.3 215 21-244 19-256 (521)
18 2wdx_A Putative hexose oxidase 100.0 1E-37 3.5E-42 333.0 32.4 205 33-244 31-258 (523)
19 2vfr_A Xylitol oxidase, aldito 100.0 9.1E-39 3.1E-43 333.9 20.6 212 43-270 4-218 (422)
20 4feh_A Oxidoreductase DPRE1; a 100.0 8E-37 2.7E-41 322.1 29.6 207 43-255 28-238 (481)
21 3js8_A Cholesterol oxidase; ch 100.0 4.7E-31 1.6E-35 277.9 38.4 199 43-251 14-235 (540)
22 2i0k_A Oxidoreductase; MIX alp 100.0 1.6E-30 5.4E-35 279.8 34.7 211 33-251 9-239 (561)
23 1hsk_A UDP-N-acetylenolpyruvoy 100.0 1.7E-31 5.8E-36 268.2 2.2 187 21-235 17-213 (326)
24 3tx1_A UDP-N-acetylenolpyruvoy 100.0 1.1E-28 3.7E-33 246.2 12.8 190 24-234 25-217 (322)
25 3i99_A UDP-N-acetylenolpyruvoy 99.9 3.3E-26 1.1E-30 230.4 14.9 181 35-234 12-199 (357)
26 1uxy_A MURB, uridine diphospho 99.9 5.8E-25 2E-29 220.9 18.5 174 43-234 2-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 2E-23 6.9E-28 202.4 10.6 161 43-233 10-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 1.7E-20 5.9E-25 176.7 9.6 121 117-245 1-127 (219)
29 1ffv_C CUTM, flavoprotein of c 98.6 1.7E-07 5.8E-12 91.9 12.3 151 58-232 4-177 (287)
30 2w3s_A Xanthine dehydrogenase; 98.0 1E-05 3.5E-10 84.2 7.4 152 57-231 175-345 (462)
31 1n62_C Carbon monoxide dehydro 97.8 3.1E-05 1.1E-09 75.7 7.5 151 58-231 4-176 (288)
32 3nvz_B Xanthine dehydrogenase/ 97.4 0.00029 9.9E-09 69.4 7.3 158 55-230 6-189 (305)
33 1t3q_C Quinoline 2-oxidoreduct 97.1 0.00048 1.7E-08 67.2 5.8 149 58-230 4-174 (288)
34 3hrd_C Nicotinate dehydrogenas 96.3 0.0025 8.6E-08 62.3 4.2 105 59-170 3-119 (296)
35 3unc_A Xanthine dehydrogenase/ 93.1 0.14 4.7E-06 59.9 7.6 106 56-170 230-356 (1332)
36 1rm6_B 4-hydroxybenzoyl-COA re 92.9 0.027 9.3E-07 55.5 1.1 99 58-167 5-117 (324)
37 3zyv_A AOH1; oxidoreductase, m 77.4 1 3.5E-05 52.9 2.8 101 59-170 240-363 (1335)
38 1rzw_A Protein AF2095(GR4); be 35.4 49 0.0017 27.2 4.8 39 55-94 45-84 (123)
39 1rrb_A RAF-1 RBD, RAF proto-on 33.1 39 0.0013 26.8 3.6 29 124-152 29-57 (107)
40 1wn2_A Peptidyl-tRNA hydrolase 29.7 73 0.0025 26.0 5.0 38 55-93 52-90 (121)
41 1xty_A PTH, peptidyl-tRNA hydr 29.5 72 0.0025 25.9 5.0 47 44-93 42-89 (120)
42 1rlk_A Hypothetical protein TA 28.1 62 0.0021 26.2 4.3 38 55-93 48-86 (117)
43 2zv3_A PTH, peptidyl-tRNA hydr 26.3 63 0.0022 26.0 4.0 31 55-86 46-76 (115)
44 2dnh_A Bruno-like 5, RNA bindi 25.1 1.4E+02 0.0046 22.7 5.8 46 207-256 31-76 (105)
45 3ulh_A THO complex subunit 4; 23.8 1.2E+02 0.0041 23.1 5.3 46 207-256 45-90 (107)
46 2do4_A Squamous cell carcinoma 23.5 1.5E+02 0.005 22.3 5.7 46 207-256 33-78 (100)
47 3ny5_A Serine/threonine-protei 22.7 94 0.0032 24.2 4.0 29 124-152 24-52 (96)
48 2ywk_A Putative RNA-binding pr 22.1 1.3E+02 0.0045 22.3 5.1 46 207-256 32-77 (95)
49 3ue2_A Poly(U)-binding-splicin 21.6 1.7E+02 0.0059 23.4 5.8 51 207-257 37-92 (118)
50 2do0_A HnRNP M, heterogeneous 20.7 1.7E+02 0.0058 22.5 5.7 46 207-256 31-76 (114)
51 1c1y_B Proto-onkogene serine/t 20.6 77 0.0026 23.6 3.1 29 124-152 12-40 (77)
52 1aie_A P53; oligomer, DNA; 1.5 20.5 23 0.00079 21.5 0.1 14 489-502 11-24 (31)
No 1
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=4.5e-66 Score=552.53 Aligned_cols=479 Identities=67% Similarity=1.166 Sum_probs=389.9
Q ss_pred CCCeEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhc-CCCeEEEEcCCCCCCCCCCCCCcEEEEcC
Q 009956 32 LKGSIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQ-SNLTVAARGNGHSINGQAMADRGLVIDMG 110 (521)
Q Consensus 32 ~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~-~~~~v~~~G~G~~~~g~~~~~~gvvidl~ 110 (521)
+.++|.+|+ ..+..|++||+..+...|.+|++|+|++||+++|++| ++ +++||++||+|||+.|++.+.+|++|||+
T Consensus 36 ~~~~v~~d~-~~~~~~~~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a-~~~~~~~v~~~GgGts~~g~~~~~~gvvidl~ 113 (524)
T 2exr_A 36 IQGEILCGG-AAADIAGRDFGGMNCVKPLAVVRPVGPEDIAGAVKAA-LRSDKLTVAARGNGHSINGQAMAEGGLVVDMS 113 (524)
T ss_dssp CSSEEECSH-HHHHHHTCCTTCCCCCCCSEEEECSSHHHHHHHHHHH-HHSSSCCEEEESSSCCSSSTTCCTTSEEEEGG
T ss_pred CCCeEEeCH-HHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHH-HhhcCceEEEECCCcCCCCcccCCCEEEEECc
Confidence 588999998 8999999999888899999999999999999999999 95 99999999999999998887689999999
Q ss_pred CCCCeeEEEec---cCCc--eEEEEeCCccHHHHHHHHH-HhCCCcccccCCCCcccccccccccccCCCCcccCccccc
Q 009956 111 STGDSHFEIVK---VKGS--TYLDVSGGALWEDVLKRCV-EDFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISN 184 (521)
Q Consensus 111 ~l~~~~i~id~---~~~~--~~v~v~aG~~~~~l~~~~~-~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~ 184 (521)
+||+ | ++|+ ..++ .+++||||++|.+++++++ ++ |+.|+++++...+||||+++++|+|+.+.+||.++|+
T Consensus 114 ~m~~-i-~i~~~~~~~~~~~~~v~v~aGv~~~~l~~~~l~~~-Gl~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~ 190 (524)
T 2exr_A 114 TTAE-N-HFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEY-GLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSN 190 (524)
T ss_dssp GGTT-S-CEEEEECCSSSSSEEEEEETTCBHHHHHHHHHHHH-SEECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGS
T ss_pred CCCC-c-EEeecccCCCCCceEEEEeCCcCHHHHHHHHHHHc-CCCCCCCCcCCceeecccCCCCCCcccccccCcHhhh
Confidence 9998 7 6654 1123 7999999999999877777 88 9998888888889999999999999999999999999
Q ss_pred eeeeEEEecCCcEEEecCCCCcchhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHHHHHHHHHhccCCCc
Q 009956 185 VAQLDVVTGNGDMVTCSESRQPELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTRDAELLVSLKEERE 264 (521)
Q Consensus 185 v~~~~~v~~~G~i~~~~~~~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 264 (521)
|+++++|++||++++++..+++||+++++||+|+|||||+++|||.|.|+...++.+.|++++++.+++..+++.+.. +
T Consensus 191 V~~l~vV~~dG~v~~~~~~~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~~~~~-~ 269 (524)
T 2exr_A 191 VTELDVVTGNGDVVTCSEIENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLVSQKNE-S 269 (524)
T ss_dssp EEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHTSCTT-S
T ss_pred EEEEEEEecCCeEEEECCCCChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHHHcCCc-c
Confidence 999999999999999998889999999999999999999999999999998888889999999999999999887655 6
Q ss_pred ccccccCeEEecCCCCccCCCCccCCCCCCCCCCCCCCCCCceEEEEEEeeee-CCCCCcchhHHHHHHHHhhcCCccce
Q 009956 265 SFDYVEGFVFVNSDDTVNGWPSVPLDPAQVFDPAHLPQTAGSVLYCLEVALHY-NNSDPRSAVDAVVDRLLERLGFVSKL 343 (521)
Q Consensus 265 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~g~~~~~~v~~~~~~l~~~~~~~~g~ 343 (521)
.+|++|...+...+.+...|...++..........+|.....+++++|+..+| ++++. ++++++++++.+.+....+.
T Consensus 270 ~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~llve~~~~~~~g~~~-~~v~~~~~~~~~~l~~~~~~ 348 (524)
T 2exr_A 270 SFDYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSVLYCLELGLHYRDSDSN-STIDKRVERLIGRLRFNEGL 348 (524)
T ss_dssp SCSEEEEEEEESSCCTTTSGGGSCSSTTSCCCGGGSCTTCCSEEEEEEEEEEECTTSCH-HHHHHHHHHHHTTCCCCTTC
T ss_pred hhHhhchhhhhcchhhhhhhhhcccccccccchhcCCcccccEEEEEEEEeecCCCCCH-HHHHHHHHHHHHHHHhCCCe
Confidence 89999999887765655444433222111111223443234577889987766 67453 67888999999888665554
Q ss_pred eeeccchhHHHHHhHHHHHHHhhhcccccCCccccccccCcchhHHHHHHHHHHhhhcCCCCcEEEEecCCCCCCCCccc
Q 009956 344 NFQVDVSYVDFLLRVKQVEEHARANGMWDSPHPWLNMFVSKSNLAEFNRVVFNEILKDGINGPMLVYPLLRSKWDDRTSV 423 (521)
Q Consensus 344 ~~~~d~~~~~~~~~~~~~~~~~~~~~lw~~r~~~~d~~vp~~~l~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 423 (521)
.+..+..+..+..+........+...+|..+++|.|++||+++++++++.+.+...++++.+.++++|+....|..+.+.
T Consensus 349 ~~~~~~~~~~~~~~~~~~~W~~R~~~~~a~~~~~~Dv~VP~s~l~~~~~~v~~~~~gdgn~h~~i~~~~~~~~~~~r~~~ 428 (524)
T 2exr_A 349 RFEVDLPYVDFLLRVKRSEEIAKENGTWETPHPWLNLFVSKRDIGDFNRTVFKELVKNGVNGPMLVYPLLRSRWDDRTSV 428 (524)
T ss_dssp EEEEEEEHHHHHTTTHHHHHHHHHTTCSSSCCCCEEEEEEHHHHHHHHHHCCCCCTTTCCSSCEEEEEEEGGGSCTTSSC
T ss_pred EeecccchhhhhhhhhhHHHHhhhhcccccCCCeeEEEECHHHHHHHHHHHHHHHhCCCCcceEEEEeCCchHHHhHHHh
Confidence 44444444444332221123344556788878889999999999999988775444555557888999988888888888
Q ss_pred ccCC-CceEEEEEeeCCCCCCCCcchHHHHHHHhHHHHHHHHHcCCcceecCCCCCChHHHHHhhcchhhHHHHhhhccC
Q 009956 424 MVPE-EEIFYLVALLRFPPPHEDGASIKKLVDQNRGIVQYCKDRGFDFKLFFPHYKSEEEWKCHFGDRWTRFRDSKKAFD 502 (521)
Q Consensus 424 ~~~d-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ehG~g~~~yl~~~~~~~~~~~~yG~~~~~l~~iK~~~D 502 (521)
..++ .+++|.+.......|...+...+++.+.+++|.+.++++|.+++.|++.+.++.+|+++||+.|++|++||++||
T Consensus 429 ~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~yl~~~~~~~~w~~~~G~~~~~m~~iK~~~D 508 (524)
T 2exr_A 429 VIPEEGEIFYIVALLRFVPPCAKVSSVEKMVAQNQEIVHWCVKNGIDYKLYLPHYKSQEEWIRHFGNRWSRFVDRKAMFD 508 (524)
T ss_dssp CCCSSCSEEEEEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEESSCCCCSHHHHHHHHGGGHHHHHHHHHHHC
T ss_pred hCCCCccEEEEEEEeccCCCcccchHHHHHHHHHHHHHHHHHHcCCccEEeecCCCCHHHHHHHhhhHHHHHHHHHhhcC
Confidence 8887 568888776553322100025666778889999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCcccCCC
Q 009956 503 PKHILAPGQKIFSRI 517 (521)
Q Consensus 503 P~~IlnPgk~i~~~~ 517 (521)
|+|||||||.||++.
T Consensus 509 P~~iLnPG~~if~~~ 523 (524)
T 2exr_A 509 PMAILSPGQKIFNRS 523 (524)
T ss_dssp TTCCBCGGGCSSCCC
T ss_pred chhhcCCCCccCCCC
Confidence 999999999999753
No 2
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2e-62 Score=527.08 Aligned_cols=484 Identities=43% Similarity=0.784 Sum_probs=374.7
Q ss_pred chhhhHhhhcCCCCeEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhc--C-CCeEEEEcCCCCCCC
Q 009956 21 DDVSTICKSLGLKGSIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQ--S-NLTVAARGNGHSING 97 (521)
Q Consensus 21 ~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~--~-~~~v~~~G~G~~~~g 97 (521)
+.+..+|+++.+.++|.+|+ ..+..|.+||+..+.+.|.+|++|+|++||+++|++| ++ + ++|++++|+|||+.|
T Consensus 32 ~~~~~~l~~~~~~~~v~~~~-~~~~~~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a-~~~~~~~~~v~~~G~G~~~~g 109 (534)
T 1w1o_A 32 RPWPASLAALALDGKLRTDS-NATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAA-NSTPGWPYTIAFRGRGHSLMG 109 (534)
T ss_dssp --------CTTTTTCEECSH-HHHHHTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHH-HHCTTCCCCEEEESSCCCSSS
T ss_pred HHHHHHHHhcCCCceEecCH-HHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHH-HhcCCCCceEEEECCCCCCCC
Confidence 35555888867789999998 8899999999988899999999999999999999999 86 6 999999999999999
Q ss_pred CCCCCCcEEEEcCCCCCee-----EEEeccCCceEEEEeCCccHHHHHHHHHHhCCCcccccCCCCcccccccccccccC
Q 009956 98 QAMADRGLVIDMGSTGDSH-----FEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLAPRSWTDYLRLTVGGTLSNAGVS 172 (521)
Q Consensus 98 ~~~~~~gvvidl~~l~~~~-----i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~~~~~tvGG~~~~~g~g 172 (521)
++.+.+|++|||++||+ | +++|+ ++.+++||||++|.+|++++.++ |++|+++++...+||||+++++|+|
T Consensus 110 ~~~~~~gvvi~l~~m~~-i~~~~~~~~d~--~~~~v~v~aGv~~~~l~~~~~~~-Gl~~~~~~~~~~~tvGG~v~~~g~g 185 (534)
T 1w1o_A 110 QAFAPGGVVVNMASLGD-AAAPPRINVSA--DGRYVDAGGEQVWIDVLRASLAR-GVAPRSWTDYLYLTVGGTLSNAGIS 185 (534)
T ss_dssp TTCCTTSEEEEGGGGGC-SSSSCSEEECT--TSSEEEEETTCBHHHHHHHHHTT-TEEESCCCSSCCSBHHHHHTTCCCS
T ss_pred CcCCCCeEEEECccccc-cccCccEEEcC--CCCEEEECCCcCHHHHHHHHHHC-CCcccCCCCCCCEEeceeccCCCcc
Confidence 88877899999999998 7 89998 77899999999999999999999 9999888888889999999999999
Q ss_pred CCCcccCccccceeeeEEEecCCcEEEecCCCCcchhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHHHH
Q 009956 173 GQAFRYGPQISNVAQLDVVTGNGDMVTCSESRQPELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTRD 252 (521)
Q Consensus 173 ~~~~~~G~~~d~v~~~~~v~~~G~i~~~~~~~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~~ 252 (521)
+.+.+||.++|+|+++++|++||++++++..+|+||||+++||+|+|||||+++||++|.|+...++.+.|++++++.++
T Consensus 186 ~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~ 265 (534)
T 1w1o_A 186 GQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSAD 265 (534)
T ss_dssp TTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHH
T ss_pred ccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999989999999999999999999999999999999888888999999999998
Q ss_pred HHHHHhccC-----CCcccccccCeEEecCCCCccCCCCc-cCCCCCCCCCCCCCCCC-CceEEEEEEeeeeCCCCC-cc
Q 009956 253 AELLVSLKE-----ERESFDYVEGFVFVNSDDTVNGWPSV-PLDPAQVFDPAHLPQTA-GSVLYCLEVALHYNNSDP-RS 324 (521)
Q Consensus 253 ~~~i~~~~~-----~p~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~g~~~-~~ 324 (521)
+..+.+... .|+.+|++|...+... .....+.+. ++.......+..++... .++++++|+..+|++... .+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ie~~~~~~g~~~~~~ 344 (534)
T 1w1o_A 266 QERLTAPRPGGGGASFGPMSYVEGSVFVNQ-SLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAA 344 (534)
T ss_dssp HHHHHCBC------CBCSCSEEEEEEEEGG-GHHHHHHTTSSSCHHHHHHHHHHHHHTTCSEEEEEEEEEEC-------C
T ss_pred HHHHHhcccccccccccchhHhhhhhhccc-ccccccccccccCccccccccccccccccceEEEEEEEEecCCCccchh
Confidence 888877755 5778999998876432 111111000 00000000000111111 347788898776755331 03
Q ss_pred hhHHHHHHHHhhcCCccceeeeccchhHHHHHhHHHHHHHhhhcccccCCccccccccCcchhHHHHHHHHHHhhhcCC-
Q 009956 325 AVDAVVDRLLERLGFVSKLNFQVDVSYVDFLLRVKQVEEHARANGMWDSPHPWLNMFVSKSNLAEFNRVVFNEILKDGI- 403 (521)
Q Consensus 325 ~v~~~~~~l~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~~~lw~~r~~~~d~~vp~~~l~~~~~~~~~~l~~~~~- 403 (521)
++++.++.+++.+....+.....+.+|..+..+........+...+|..+++|.|++||+++++++++.+.+.+.+...
T Consensus 345 ~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~w~~r~~~~~~~~~~~~d~~vP~s~l~~~~~~~~~~l~~~~~~ 424 (534)
T 1w1o_A 345 AVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDI 424 (534)
T ss_dssp HHHHHHHHHHTTCCCCTTCEEEEEEEHHHHHTHHHHHHHHHHHTTCSSSCCCCEEEEEEGGGHHHHHHHHTTTTTTTSCC
T ss_pred hhHHHHHHHHHhhcccCCcceeccchHHHHhhhhhhhHHHHhhccccccCCccccEEecHHHHHhHHHHHHHHHhhccCC
Confidence 4677888888887544443333456666654433222222334567877777789999999999999888744554332
Q ss_pred CCcEEEEecCCCCCCCCcccccCCCceEEEEEeeCCC-CCCCCcchHHHHHHHhHHHHHHHHHcCCcceecCCCCCChHH
Q 009956 404 NGPMLVYPLLRSKWDDRTSVMVPEEEIFYLVALLRFP-PPHEDGASIKKLVDQNRGIVQYCKDRGFDFKLFFPHYKSEEE 482 (521)
Q Consensus 404 ~~~i~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~ehG~g~~~yl~~~~~~~~ 482 (521)
.+.+.++++.+..|..+++.+.||+++||++...... +++ ..++..+..+++.+.+.+.|.++..|++.+....+
T Consensus 425 ~~~~~~~~~~gh~~~~~~s~v~~dgn~h~~v~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~yl~~~~~~~~ 500 (534)
T 1w1o_A 425 VGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPN----DLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSD 500 (534)
T ss_dssp CSCEEEEEEEGGGSCTTSSCCCCSSSEEEEEEECCCC---C----HHHHHHHHHHHHHHHHHHTTCCCEESSCCCSSHHH
T ss_pred cccEEEeecccccccccccccCCCccEEEEEEEecCCCCcc----hHHHHHHHHHHHHHHHHHhCCCcEEECCCCCChHH
Confidence 2456677877766777788889999999999886421 111 34556778888888888888888899988888899
Q ss_pred HHHhhcc-hhhHHHHhhhccCCCCccCCCCcccC
Q 009956 483 WKCHFGD-RWTRFRDSKKAFDPKHILAPGQKIFS 515 (521)
Q Consensus 483 ~~~~yG~-~~~~l~~iK~~~DP~~IlnPgk~i~~ 515 (521)
|+++||+ +|++|++||++|||+|||||||+||+
T Consensus 501 w~~~~G~~~~~~l~~iK~~~DP~~ilnpgk~I~~ 534 (534)
T 1w1o_A 501 WVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN 534 (534)
T ss_dssp HHHHHCHHHHHHHHHHHHHHCTTCCBCGGGCSCC
T ss_pred HHHHhCHHHHHHHHHHHHhcCchhhcCCCCcCCC
Confidence 9889997 99999999999999999999988874
No 3
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3.5e-64 Score=530.51 Aligned_cols=426 Identities=17% Similarity=0.178 Sum_probs=333.4
Q ss_pred CchhhhHhhhcCCCCeEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCC
Q 009956 20 NDDVSTICKSLGLKGSIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQA 99 (521)
Q Consensus 20 ~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~ 99 (521)
.+.++ +|++....++|.+|+ ..+..|++||+..+++.|.+|++|+|++||+++|++| +++++|++++|+|||+.|++
T Consensus 15 ~~~~~-~L~~~lg~~~v~~~~-~~~~~~~~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a-~~~~~pv~~~GgGt~~~g~~ 91 (476)
T 3pm9_A 15 PELIA-RFTAIVGDKHALTDP-LELEAYITEERNLYRGHSPLVLRPGSTEEVVAICKLA-NEARVALVPQGGNTGLVGGQ 91 (476)
T ss_dssp HHHHH-HHHHHHCGGGEECSH-HHHHHHHBCTTCCCBCCCSCEECCCSHHHHHHHHHHH-HHHTCCEEEESSSCCSSSTT
T ss_pred HHHHH-HHHHhcCCCcEecCH-HHHHHHhcccccccCCCCCEEEecCCHHHHHHHHHHH-HHcCCeEEEEeCCCCCCCCc
Confidence 34444 888866778999998 8999999999877899999999999999999999999 99999999999999999888
Q ss_pred CCC-CcEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCc-ccccCCCCcccccccccccccCCCCcc
Q 009956 100 MAD-RGLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLA-PRSWTDYLRLTVGGTLSNAGVSGQAFR 177 (521)
Q Consensus 100 ~~~-~gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~-p~~~~~~~~~tvGG~~~~~g~g~~~~~ 177 (521)
.+. +|++|||++||+ ++++|+ ++.+++||||++|.+|.+++.++ |++ |+++++...+||||++++|++|..+.+
T Consensus 92 ~~~~ggvvIdl~~m~~-i~~id~--~~~~v~V~aGv~~~~l~~~l~~~-Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~ 167 (476)
T 3pm9_A 92 TPHNGEVVISLKRMDK-IREIDT--SSNTITVEAGAILQRVQEKAAEV-DRLFPLSLGAQGSCTIGGNLSTNAGGTAALA 167 (476)
T ss_dssp CCCSSCEEEECTTCCC-EEEEET--TTTEEEEETTCBHHHHHHHHHHT-TEECCCCCTTTTTCBHHHHHHHTCCCTTHHH
T ss_pred cCCCCcEEEEeeCCCc-eEEEcC--CCCeEEECCCcCHHHHHHHHHHh-CCccCCCCCCCCcEEEccccCCCCCCCcccc
Confidence 874 689999999998 889999 88999999999999999999999 996 888888888999999998888999999
Q ss_pred cCccccceeeeEEEecCCcEEEecC-----CCCcchhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHHHH
Q 009956 178 YGPQISNVAQLDVVTGNGDMVTCSE-----SRQPELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTRD 252 (521)
Q Consensus 178 ~G~~~d~v~~~~~v~~~G~i~~~~~-----~~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~~ 252 (521)
||.++|+|+++++|++||++++++. ..++|++++++||+|+|||||+++|||.|.|+......+.|++++++.++
T Consensus 168 yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~ 247 (476)
T 3pm9_A 168 YGLARDMALGVEVVLADGRVMNLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKL 247 (476)
T ss_dssp HCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHH
T ss_pred cCcHHHheeEEEEEccCCeEEEcCCcccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHH
Confidence 9999999999999999999999764 24679999999999999999999999999999888889999999999999
Q ss_pred HHHHHh-ccCCCcccccccCeEEecCCCCccCCCCccCCCCCCCCCCCCC-CCCCceEEEEEEeeeeCCCCCcchhHHHH
Q 009956 253 AELLVS-LKEERESFDYVEGFVFVNSDDTVNGWPSVPLDPAQVFDPAHLP-QTAGSVLYCLEVALHYNNSDPRSAVDAVV 330 (521)
Q Consensus 253 ~~~i~~-~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~g~~~~~~v~~~~ 330 (521)
+..+.+ .+..|+++|+||...+...+... . ...| ....++++++| +++.+ +++++++
T Consensus 248 ~~~~~~~~g~~p~a~El~d~~~~~~~~~~~---------~------~~~~~~~~~~~~llve----~~g~~--~~~~~~~ 306 (476)
T 3pm9_A 248 LGIAQGEAAGNLTSFELIAETPLDFSVRHA---------N------NRDPLEARYPWYVLIE----LSSPR--DDARAAL 306 (476)
T ss_dssp HHHHHHHHGGGEEEEEEEEHHHHHHHHHHT---------T------CCCCSSSCCSEEEEEE----EEESS--SCHHHHH
T ss_pred HHHHHHhcCCCceEEEecCHHHHHHHHhcc---------C------CCCCCCccCCeEEEEE----EccCc--HHHHHHH
Confidence 998876 46778999999986542211110 0 0111 12235778899 45554 4566777
Q ss_pred HHHHhhcCCccc---eeeeccchhHHHHHhHHHHHHHhhhcccccCCc------------cccccccCcchhHHHHHHHH
Q 009956 331 DRLLERLGFVSK---LNFQVDVSYVDFLLRVKQVEEHARANGMWDSPH------------PWLNMFVSKSNLAEFNRVVF 395 (521)
Q Consensus 331 ~~l~~~~~~~~g---~~~~~d~~~~~~~~~~~~~~~~~~~~~lw~~r~------------~~~d~~vp~~~l~~~~~~~~ 395 (521)
+++++.+..... .....+ ..++..+|.+|+ -..|++||+++++++++.+.
T Consensus 307 ~~~~~~~~~~g~~~~~~~a~~---------------~~~~~~lW~~R~~~~~~~~~~g~~~~~Dv~vP~~~l~~~~~~~~ 371 (476)
T 3pm9_A 307 ESILERGFEDGIVVDAAIANS---------------VQQQQAFWKLREEISPAQKPEGGSIKHDISVPVAAVPQFIEQAN 371 (476)
T ss_dssp HHHHHHHHHTTCCCEEEECCS---------------HHHHHHHHHHHHTHHHHTGGGCCEECCEEECCGGGHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcceEEeCC---------------HHHHHHHHHHHHHHHHHHhhcCCceeEEEEeeHHHHHHHHHHHH
Confidence 777665522111 111111 111223333332 23599999999999999998
Q ss_pred HHhhhcCCCC-cEEEEecCCCCCCCCcccccCCCceEEEEEeeCCCCCCCCcc-hHHHHHHHhHHHHH--------HHHH
Q 009956 396 NEILKDGING-PMLVYPLLRSKWDDRTSVMVPEEEIFYLVALLRFPPPHEDGA-SIKKLVDQNRGIVQ--------YCKD 465 (521)
Q Consensus 396 ~~l~~~~~~~-~i~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~--------~~~e 465 (521)
+ +++...++ .+.. ++|++|||+|+++...... +.+ ..+++.++.+.+++ +++|
T Consensus 372 ~-~~~~~~~~~~~~~------------~gH~gdGnlH~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~gGsis~E 434 (476)
T 3pm9_A 372 A-AVVALIPGARPVP------------FGHLGDGNIHYNVSQPVGA----DKAEFLARWHDVSQVVFEVVLRLGGSISAE 434 (476)
T ss_dssp H-HHHHHSTTCEEEE------------EEEGGGTEEEEEEECCTTC----CHHHHHTTHHHHHHHHHHHHHHTTCBSCSS
T ss_pred H-HHHHhcCCCeEEE------------EEEeCCCceEEEEecCCcC----ChHHHHHHHHHHHHHHHHHHHHcCCEEEEc
Confidence 4 44432222 2233 3899999999999865311 111 23445566666665 7789
Q ss_pred cCCcc--eecCCCCCChHHHHHhhcchhhHHHHhhhccCCCCccCCCCcc
Q 009956 466 RGFDF--KLFFPHYKSEEEWKCHFGDRWTRFRDSKKAFDPKHILAPGQKI 513 (521)
Q Consensus 466 hG~g~--~~yl~~~~~~~~~~~~yG~~~~~l~~iK~~~DP~~IlnPgk~i 513 (521)
||+|. ++||..+.++.. +++|++||++|||+|||||||.+
T Consensus 435 HGiG~~k~~~l~~~~~~~~--------~~~m~~iK~~~DP~~ilNPGki~ 476 (476)
T 3pm9_A 435 HGIGVMKRDELAEVKDKTA--------IELMRSIKALLDPHGIMNPGKVV 476 (476)
T ss_dssp SCCTTTTHHHHHHHSCHHH--------HHHHHHHHHHHCTTSCBSTTSCC
T ss_pred ccCchhHHHHHHHhcCHHH--------HHHHHHHHHHhCcccCCCCCCcC
Confidence 99997 688876666665 79999999999999999999654
No 4
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=2.4e-59 Score=513.37 Aligned_cols=461 Identities=15% Similarity=0.163 Sum_probs=314.1
Q ss_pred cccCcCCCchhhhHhhhcCCCCeEEcCCCcchhhhhc---------ccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCC
Q 009956 13 DVESRAENDDVSTICKSLGLKGSIDFGVGATNGSADK---------DFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSN 83 (521)
Q Consensus 13 ~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~---------~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~ 83 (521)
++.++...+.+. +|++.. +.+.+|. +++..++. -|.+.++..|++||+|+|++||+++|++| ++++
T Consensus 155 ~p~~~~~~~~~~-~l~~~~--~~~~~~~-~~r~~h~~g~s~~d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A-~~~~ 229 (658)
T 4bby_A 155 TPPSIVNEDFLH-ELKKTN--ISYSQEA-DDRVFRAHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLA-CKYN 229 (658)
T ss_dssp CCCCCCCHHHHH-HHHHHT--CEEECCH-HHHHHTSCCSCHHHHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHH-HHTT
T ss_pred CCCCCCCHHHHH-HHHHhc--ccccCch-HHHhhhcCCCCHHHHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHH-HHCC
Confidence 333333334444 676633 3456666 44444443 25667899999999999999999999999 9999
Q ss_pred CeEEEEcCCCCCCCCCCC-----CCcEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCc-ccccCCC
Q 009956 84 LTVAARGNGHSINGQAMA-----DRGLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLA-PRSWTDY 157 (521)
Q Consensus 84 ~~v~~~G~G~~~~g~~~~-----~~gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~-p~~~~~~ 157 (521)
+||+|||||||+.|++.+ .++|+|||++||+ |++||+ ++.+++|||||++.+|.+++.++ |++ |+++++.
T Consensus 230 ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnr-IleiD~--~~~~atVeaGv~~~~L~~~L~~~-Gl~lp~dP~S~ 305 (658)
T 4bby_A 230 LCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNR-ILWVDE--NNLTAHVEAGITGQELERQLKES-GYCTGHEPDSL 305 (658)
T ss_dssp CEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCC-EEEEET--TTTEEEEETTCBHHHHHHHHHHH-TEECCCCCTTT
T ss_pred CeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCC-cEEEcC--CCCEEEEecCchHHHHHHHHHHc-CCccCCCCCCc
Confidence 999999999999877654 2469999999998 999999 88999999999999999999999 984 7788888
Q ss_pred CcccccccccccccCCCCcccCccccceeeeEEEecCCcEEEecC----CCCcchhhhhhccCccceEEEEeEEeeEecC
Q 009956 158 LRLTVGGTLSNAGVSGQAFRYGPQISNVAQLDVVTGNGDMVTCSE----SRQPELFFNVLGGLGQFGIITRARVLLQSAP 233 (521)
Q Consensus 158 ~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~~v~~~G~i~~~~~----~~~~dl~~~~~gs~G~lGiit~~~l~l~p~p 233 (521)
..+||||++++|++|..+.+||.++|+|++++||++||++++.++ ..+|||+++++||+|||||||+++|||+|.|
T Consensus 306 ~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P 385 (658)
T 4bby_A 306 EFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTP 385 (658)
T ss_dssp TTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECC
T ss_pred cccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCCcCHHHHhccCCCcCcceeeeeeeeccCC
Confidence 899999999999999999999999999999999999999988754 3568999999999999999999999999999
Q ss_pred CceEEEEEEeCCHHHHHHHHHHHHhccCCCcccccccCeEEecCCCCccCCCCccCCCC----CC---CCCCCCCCCCCc
Q 009956 234 DKVRWIRLVYAEFDEFTRDAELLVSLKEERESFDYVEGFVFVNSDDTVNGWPSVPLDPA----QV---FDPAHLPQTAGS 306 (521)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~ 306 (521)
+...+..+.|++++++.+++..+.+.+..|+++|++|...+.....+....... +... .. ......... ..
T Consensus 386 ~~~~~~~~~f~d~~~a~~av~~i~~~~~~psa~El~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~g~~~~-~~ 463 (658)
T 4bby_A 386 EYQKYGSVAFPNFEQGVACLREIAKQRCAPASIRLMDNQQFQFGHALKPQVSSI-FTSFLDGLKKFYITKFKGFDPN-QL 463 (658)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCCCSEEEEECHHHHHHHHHTSSCCCCT-TCC--------------CCCTT-TC
T ss_pred ccccccccccCCchhhhhhHHHHHHcCCCccccccccHHHHHHHHhhccccccc-ccccccchhhhhhhhhccCChH-HH
Confidence 999999999999999999999999998889999999865432110000000000 0000 00 000011001 11
Q ss_pred eEEEEEEeeeeCCCCCcchhHHHHHHHHhhcCCccceeeeccchhHHHHHhHHHHHHHhhhcccccCCccccccccCcch
Q 009956 307 VLYCLEVALHYNNSDPRSAVDAVVDRLLERLGFVSKLNFQVDVSYVDFLLRVKQVEEHARANGMWDSPHPWLNMFVSKSN 386 (521)
Q Consensus 307 ~~~~~e~~~~~~g~~~~~~v~~~~~~l~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~~~lw~~r~~~~d~~vp~~~ 386 (521)
....+. +++.. +.+.+..+.+.+.+....+.....+.....|..+.............+... ...|+++|+++
T Consensus 464 ~~~~~~----~eg~~--~~v~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~avP~~~ 536 (658)
T 4bby_A 464 SVATLL----FEGDR--EKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIG-ESFETSAPWDR 536 (658)
T ss_dssp EEEEEE----EEECH--HHHHHHHHHHHHHHHTTTCEECCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-EEEEEEEEGGG
T ss_pred HHHHHH----hcccH--HHHHHHHHHHHHHHHhhCcchhhhhHHHHHHHHhhHHHHHHhhccccCCcc-ceEEEEeeHHH
Confidence 222222 44443 455555555554443333332222222222222222221111111111111 13589999999
Q ss_pred hHHHHHHHHHHhhhc----CCC-CcEEEEecCCCCCCCCcccccCCCc--eEEEEEeeCCCCCCCCcchHHHHHHHhHHH
Q 009956 387 LAEFNRVVFNEILKD----GIN-GPMLVYPLLRSKWDDRTSVMVPEEE--IFYLVALLRFPPPHEDGASIKKLVDQNRGI 459 (521)
Q Consensus 387 l~~~~~~~~~~l~~~----~~~-~~i~~~~~~~~~~~~~~~~~~~dg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 459 (521)
+++++..+.+.+.+. +.. ..+... ..+|.++++ +|+++........ + ..+.+++..+.+
T Consensus 537 l~~~~~~v~~~l~~~~~~~g~~~~~~~~~----------~~~h~~dg~~~l~~~~~~~~~~~~---d-~~~~~~~~~~~~ 602 (658)
T 4bby_A 537 VVDLCRNVKERIRRECKEKGVQFPPLSTC----------RVTQTYDAGACIYFYFAFNYRGIS---D-PLAVFEQTEAAA 602 (658)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSCCEEEE----------EEEEECSSEEEEEEEEEEECTTCS---C-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccceE----------EEEEEeccCceEEEEecCCcCCch---h-HHHHHHHHHHHH
Confidence 999998887544332 111 111111 236777776 4444444321111 1 334444444444
Q ss_pred HH--------HHHHcCCcc--eecCCCCCChHHHHHhhcchhhHHHHhhhccCCCCccCCCCcc
Q 009956 460 VQ--------YCKDRGFDF--KLFFPHYKSEEEWKCHFGDRWTRFRDSKKAFDPKHILAPGQKI 513 (521)
Q Consensus 460 ~~--------~~~ehG~g~--~~yl~~~~~~~~~~~~yG~~~~~l~~iK~~~DP~~IlnPgk~i 513 (521)
++ +++|||+|+ ++||..++++.. +++|++||++|||+|||||||+|
T Consensus 603 ~~~v~~~GGsiS~EHGIG~~k~~~l~~~~g~~~--------l~lmr~IK~a~DP~gILNPGKll 658 (658)
T 4bby_A 603 REEILANGGSLSHHHGVGKLRKQWLKESISDVG--------FGMLKSVKDYVDPTNIFGNRNLL 658 (658)
T ss_dssp HHHHHHTTCCSCSSSCCTTTSGGGHHHHHCHHH--------HHHHHHHHHHHSTTCSSCSCCCC
T ss_pred HHHHHHcCCeEEEcccchHHHHHHHHHhcCHHH--------HHHHHHHHHHhCcccCCCCCCCC
Confidence 44 688999998 678755555554 79999999999999999999765
No 5
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=4.9e-55 Score=470.73 Aligned_cols=458 Identities=14% Similarity=0.138 Sum_probs=303.4
Q ss_pred cccCcCCCchhhhHhhhcC-CCCeEEcCCCcchhhhhcc---------cCCCCCCCccEEEeCCCHHHHHHHHHHHHhcC
Q 009956 13 DVESRAENDDVSTICKSLG-LKGSIDFGVGATNGSADKD---------FGGMYSYKPLAVIRPSGADDVAVVIKAAHLQS 82 (521)
Q Consensus 13 ~~~~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~~~~~~---------~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~ 82 (521)
++.+++..+.++ .|++.. . ++|.+|+ ..+..|++| |.+.+...|.+|++|+|++||+++|++| +++
T Consensus 85 ~p~~~~~~~~~~-~L~~~l~g-~~v~~~~-~~~~~y~~d~~~~~~~~~~~g~~~~~p~~vv~P~s~eeV~~iv~~a-~~~ 160 (584)
T 2uuu_A 85 VDPPKQYPEFVR-ELKAFFLP-DQLKDDK-LARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLA-HKY 160 (584)
T ss_dssp CCCCCCCHHHHH-HHHTTSCG-GGEECSH-HHHHHTTCCSSHHHHHHHHTTCCCCCCSEEECCCSHHHHHHHHHHH-HHH
T ss_pred CCCCcCCHHHHH-HHHhhcCC-CeEEECH-HHHHHhccCCchhhhhhhccCccCCCCCEEEeCCCHHHHHHHHHHH-HHc
Confidence 444434334444 888854 4 7899988 666666543 2233567899999999999999999999 999
Q ss_pred CCeEEEEcCCCCCCCCCCCC----CcEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCc-ccccCCC
Q 009956 83 NLTVAARGNGHSINGQAMAD----RGLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLA-PRSWTDY 157 (521)
Q Consensus 83 ~~~v~~~G~G~~~~g~~~~~----~gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~-p~~~~~~ 157 (521)
++||+++|+|||+.|++.+. ++++|||++||+ |+++|+ ++.+++||||+++.+|.+++.++ |+. |+++++.
T Consensus 161 ~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~-I~~id~--~~~~v~v~aGv~~~~l~~~l~~~-Gl~~~~~p~s~ 236 (584)
T 2uuu_A 161 NVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNK-VLWVDR--REMTACIQVGIMGPELEKQLHKQ-GVSLGHDPDSF 236 (584)
T ss_dssp TCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCC-EEEEET--TTTEEEEETTCBHHHHHHHHHHT-TEECCCCCTTG
T ss_pred CCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCc-cEEEcC--CCCEEEECCCCcHHHHHHHHHHc-CCeeCcCCCcc
Confidence 99999999999999887763 578999999998 789999 78999999999999999999999 985 5555556
Q ss_pred CcccccccccccccCCCCcccCccccceeeeEEEecCCcEEEe---cCCCCcchhhhhhccCccceEEEEeEEeeEecCC
Q 009956 158 LRLTVGGTLSNAGVSGQAFRYGPQISNVAQLDVVTGNGDMVTC---SESRQPELFFNVLGGLGQFGIITRARVLLQSAPD 234 (521)
Q Consensus 158 ~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~~v~~~G~i~~~---~~~~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~ 234 (521)
..+||||++++|++|..+.+||.++|+|+++++|++||++++. ....++|++++++||+|+|||||+++||+.|.|+
T Consensus 237 ~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~ 316 (584)
T 2uuu_A 237 EFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQ 316 (584)
T ss_dssp GGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHHHTTCTTSSCEEEEEEEECEECCS
T ss_pred CCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhhhccCCCCcEEEEEEEEEEEeccc
Confidence 6789999999999899999999999999999999999998762 2346899999999999999999999999999999
Q ss_pred ceEEEEEEeCCHHHHHHHHHHHHhccCCCcccccccCeEEecCCCCccCCCCccCCC------CCC-CCCCCCCCCCCce
Q 009956 235 KVRWIRLVYAEFDEFTRDAELLVSLKEERESFDYVEGFVFVNSDDTVNGWPSVPLDP------AQV-FDPAHLPQTAGSV 307 (521)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~ 307 (521)
......+.|++++++.+++..+.+.+..|+++|++|...+......... .+. ... ... ..+..++. ...+
T Consensus 317 ~~~~~~~~f~~~~~a~~~~~~~~~~~~~p~a~El~d~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~ 393 (584)
T 2uuu_A 317 AVEYYGFLFPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPS-KGA-VSEFTSAMVKKYLHYIRSFDF-KNVC 393 (584)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHHTCCCSEEEEECHHHHHHHHHTCCS-CCC-TTCCHHHHHHHHHHHTTTSCT-TTCE
T ss_pred ceEEEEEEcCCHHHHHHHHHHHHhcCCCceEEEEechhHHHHHhhccCc-ccc-cchhhhhhHHHhhhhccCCCC-CccE
Confidence 8888889999999999999999888888999999997543210000000 000 000 000 00012322 2346
Q ss_pred EEEEEEeeeeCCCCCcchhHHHHHHHHhhcCCccceeeeccchhHHHHHhHHHHHHHhhhcccccCC--ccccccccCcc
Q 009956 308 LYCLEVALHYNNSDPRSAVDAVVDRLLERLGFVSKLNFQVDVSYVDFLLRVKQVEEHARANGMWDSP--HPWLNMFVSKS 385 (521)
Q Consensus 308 ~~~~e~~~~~~g~~~~~~v~~~~~~l~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~~~lw~~r--~~~~d~~vp~~ 385 (521)
++++| +++.+ ++++++++++.+.+....+..... ....-|..+-.. . +.-+...|... ....|++||++
T Consensus 394 ~llve----~~g~~--~~v~~~~~~~~~~~~~~g~~~~~~-~~~~lW~~r~~~-~-~~l~~~~~~~g~~~~~~Dv~VP~~ 464 (584)
T 2uuu_A 394 LSIIG----FEGPK--KVVDFHRTSVFDILSKNAAFGLGS-APGKTWAEKRYD-L-PYIRDFLLDHNMWVDVAETTVSYA 464 (584)
T ss_dssp EEEEE----EEECH--HHHHHHHHHHHHHHHTTTCEEEEE-ESTTHHHHGGGG-H-HHHHHHHHTTTEEEEEEEEEEEHH
T ss_pred EEEEE----EecCh--HHHHHHHHHHHHHHHHCCCccchH-HHHHHHHHhhhc-h-HHHHhhhcccCCccccceEEeeHH
Confidence 67788 55654 567777777766654333332211 112223211111 1 11111222211 12249999999
Q ss_pred hhHHHHHHHHHHh---hhcCCCCcEEEEecCCCCCCCCcccccCCCc--eEEEEEeeCCCCCCCCcchHHHHHHHhHHHH
Q 009956 386 NLAEFNRVVFNEI---LKDGINGPMLVYPLLRSKWDDRTSVMVPEEE--IFYLVALLRFPPPHEDGASIKKLVDQNRGIV 460 (521)
Q Consensus 386 ~l~~~~~~~~~~l---~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 460 (521)
+++++++.+.+.+ ..... -.+.++ ...+|.+|++ +|+.+..... .+ + ..+++.+..+.++
T Consensus 465 ~l~~~~~~~~~~l~~~~~~~g-~~~~~~---------~h~gH~gd~G~~~~~~~~~~~~-~~--~--~~~~~~~~~~~~~ 529 (584)
T 2uuu_A 465 NLQTLWKDAKQTFVKHFKDQG-IPAWIC---------AHISHTYTNGVCLYFIFASKQN-EN--K--DMAQYIEAKKLMT 529 (584)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT-CCEEEE---------EEEEEEETTEEEEEEEEEEECC-TT--C--CTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHhcC-CeeEEE---------EEEEeecCCCcEEEEEeccCCC-Ch--h--hHHHHHHHHHHHH
Confidence 9999999988542 22211 122232 0125666643 3443443311 11 1 2333344444444
Q ss_pred H--------HHHHcCCcc--eecCCCCCChHHHHHhhcchhhHHHHhhhccCCCCccCCCCcc
Q 009956 461 Q--------YCKDRGFDF--KLFFPHYKSEEEWKCHFGDRWTRFRDSKKAFDPKHILAPGQKI 513 (521)
Q Consensus 461 ~--------~~~ehG~g~--~~yl~~~~~~~~~~~~yG~~~~~l~~iK~~~DP~~IlnPgk~i 513 (521)
+ +++|||+|+ ++||..++++.. +++|++||++|||+|||||||.+
T Consensus 530 ~~v~~~gGsiS~EHGiG~~k~~~l~~~~g~~~--------~~lmr~iK~a~DP~gIlNPGki~ 584 (584)
T 2uuu_A 530 DIIFKYGGSLSHHHGVGYEHVPWMTRYATRGW--------INVYRSLKETIDPKDICNPRKLI 584 (584)
T ss_dssp HHHHHTTCCCC------------------CTH--------HHHHHHHHHHHCTTCCBSCCCC-
T ss_pred HHHHHcCCcEEecccCCcccHHHHHHhcCHHH--------HHHHHHHHHHcCCCcCCCCCCCC
Confidence 4 789999998 689987777766 79999999999999999999653
No 6
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=100.00 E-value=2.4e-52 Score=450.22 Aligned_cols=439 Identities=14% Similarity=0.135 Sum_probs=309.7
Q ss_pred hHhhhcCCCCeEEcCCCcchhh----hhcc------cCC--CCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCC
Q 009956 25 TICKSLGLKGSIDFGVGATNGS----ADKD------FGG--MYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNG 92 (521)
Q Consensus 25 ~~l~~~~~~~~v~~~~~~~~~~----~~~~------~~~--~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G 92 (521)
++|++....++|.+|+ ..+.. |.+| |+. .+++.|.+|++|+|++||+++|++| +++++||++||+|
T Consensus 26 ~~L~~~~g~~~v~~d~-~~~~~~~~~y~~d~~~~d~~~~~~~~~~~p~~Vv~P~s~~eV~~iv~~a-~~~~~pv~~~g~G 103 (560)
T 1e8g_A 26 QDIIRIVGSENVEVIS-SKDQIVDGSYMKPTHTHDPTHVMDQDYFLASAIVAPRNVADVQSIVGLA-NKFSFPLWPISIG 103 (560)
T ss_dssp HHHHHHHCGGGEEECC------CCBCSSSBCSSSCSSCCSCTTSSCCSEEECCSSHHHHHHHHHHH-HHHTCCEEEESSC
T ss_pred HHHHHhhCcccEecCH-HHhhhhhhhhccccccccccccccccccCCcEEEeCCCHHHHHHHHHHH-HHcCCcEEEecCC
Confidence 3777766677899999 78888 8877 554 4788999999999999999999999 9999999999999
Q ss_pred CCCC-CCCCC--CCcEEEEc-CCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCc---ccccCCCCccccccc
Q 009956 93 HSIN-GQAMA--DRGLVIDM-GSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLA---PRSWTDYLRLTVGGT 165 (521)
Q Consensus 93 ~~~~-g~~~~--~~gvvidl-~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~---p~~~~~~~~~tvGG~ 165 (521)
||+. |++.+ .+|++||| ++||+ |+++|+ ++.+++||||+++.+|.+++.++ |++ |+++++...+||||+
T Consensus 104 t~~~~gg~~p~~~~gvvidl~~~mn~-il~id~--~~~~v~v~aGv~~~~l~~~l~~~-Gl~~~~~~~p~~~~~~tigG~ 179 (560)
T 1e8g_A 104 RNSGYGGAAPRVSGSVVLDMGKNMNR-VLEVNV--EGAYCVVEPGVTYHDLHNYLEAN-NLRDKLWLDVPDLGGGSVLGN 179 (560)
T ss_dssp CCTTTTTTCCSSTTCEEEECTTTCCC-EEEEET--TTTEEEECTTCBHHHHHHHHHHT-TCTTTEECCCCSSTTSBHHHH
T ss_pred CcCCcCCCCCCcCCEEEEEchHhcCC-eEEEcC--CCCEEEEeCCCCHHHHHHHHHHc-CCccccCCCCCCCCccchhhh
Confidence 9986 66554 48999999 99998 889999 88999999999999999999999 987 444444447899999
Q ss_pred ccccccCCCCcccCccccceeeeEEEecCCcEEEecCC--CC----------------cchhhhhhc----------cCc
Q 009956 166 LSNAGVSGQAFRYGPQISNVAQLDVVTGNGDMVTCSES--RQ----------------PELFFNVLG----------GLG 217 (521)
Q Consensus 166 ~~~~g~g~~~~~~G~~~d~v~~~~~v~~~G~i~~~~~~--~~----------------~dl~~~~~g----------s~G 217 (521)
++++|.|.. +||.++|+|+++++|++||++++++.. ++ ...|.++.| ++|
T Consensus 180 ~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~G 257 (560)
T 1e8g_A 180 AVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQS 257 (560)
T ss_dssp HHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSS
T ss_pred ccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhcccccC
Confidence 998776653 999999999999999999999999752 23 233333333 358
Q ss_pred cceEEEEeEEeeEecCCceEEEEEEeCCHHHHHHHHH---HHHhccCCCcccccccCeE----EecCCCCccCCCCccCC
Q 009956 218 QFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTRDAE---LLVSLKEERESFDYVEGFV----FVNSDDTVNGWPSVPLD 290 (521)
Q Consensus 218 ~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~p~~~~~~d~~~----~~~~~~~~~~~~~~~~~ 290 (521)
+|||||+++|||.|.|+....+.+.|++++++.+++. .+.+.+..|+.+|++|... +...+.+ ..
T Consensus 258 tlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~~~~~~p~~~el~d~~~~~~~l~~~~~~--------~~ 329 (560)
T 1e8g_A 258 NMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLRLGMALQNVPTIRHILLDAAVLGDKRSY--------SS 329 (560)
T ss_dssp SSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHHHTTSSCSCCEEEEHHHHHHHHCCGGGT--------CC
T ss_pred cEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHHHcCCCcceeEEechHHHhhhhhhhhhh--------cc
Confidence 9999999999999999998889999999998766554 4656677788999998762 1011011 01
Q ss_pred CCCCCCCCCCCCC----------CCceEEEEEEeeeeCCCCCcchhHHHHHHHHhhcCCccceee--eccch-hHHHHHh
Q 009956 291 PAQVFDPAHLPQT----------AGSVLYCLEVALHYNNSDPRSAVDAVVDRLLERLGFVSKLNF--QVDVS-YVDFLLR 357 (521)
Q Consensus 291 ~~~~~~~~~~~~~----------~~~~~~~~e~~~~~~g~~~~~~v~~~~~~l~~~~~~~~g~~~--~~d~~-~~~~~~~ 357 (521)
. ...+|.+ ...+++++| ++|+. ++++++++.+.+.+....+..+ ..+.. ...|+.|
T Consensus 330 ~-----~~~~p~~~~~~l~~~~~~~~~~l~~e----~~g~~--~~v~~~~~~i~~i~~~~~~~~~~~~~~~~e~~~~w~R 398 (560)
T 1e8g_A 330 R-----TEPLSDEELDKIAKQLNLGRWNFYGA----LYGPE--PIRRVLWETIKDAFSAIPGVKFYFPEDTPENSVLRVR 398 (560)
T ss_dssp C-----SSCCCHHHHHHHHHHHTCCSEEEEEE----EESCH--HHHHHHHHHHHHHHTTSTTCEEECGGGSCTTCHHHHH
T ss_pred C-----CCCCCHHHHHHHHhhcCCCceEEEEE----EeCCH--HHHHHHHHHHHHHHHhCCCceeeccccchhhhhHHHH
Confidence 0 0112211 134677788 55644 5677766666555533332211 22221 2223222
Q ss_pred HHHH---HH-HhhhcccccC--CccccccccCc--chhHHHHHHHHHHhhh-cCCCCcEEEEecCCCCCCCCcccccCCC
Q 009956 358 VKQV---EE-HARANGMWDS--PHPWLNMFVSK--SNLAEFNRVVFNEILK-DGINGPMLVYPLLRSKWDDRTSVMVPEE 428 (521)
Q Consensus 358 ~~~~---~~-~~~~~~lw~~--r~~~~d~~vp~--~~l~~~~~~~~~~l~~-~~~~~~i~~~~~~~~~~~~~~~~~~~dg 428 (521)
.... .. .......|.. .+.|.|+++|+ ++++++++.+.+ +.+ ++... .+++|++||
T Consensus 399 ~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~vP~~~~~l~~~~~~~~~-~~~~~g~~~--------------~~~gH~gdG 463 (560)
T 1e8g_A 399 DKTMQGIPTYDELKWIDWLPNGAHLFFSPIAKVSGEDAMMQYAVTKK-RCQEAGLDF--------------IGTFTVGMR 463 (560)
T ss_dssp HHHTTTCCCCGGGGGGGGSTTEEEEEECBEECSSHHHHHHHHHHHHH-HHHHHTCCC--------------CEEEEECSS
T ss_pred HhhcccCchhhhhccccccCCCceEEEeeecCCCHHHHHHHHHHHHH-HHHHcCCce--------------EEEEEecCC
Confidence 1110 00 0001112332 12346899999 999999999984 543 33221 244899999
Q ss_pred ceEEEEEeeCCCCCCCCcc-hHHHHHHHhHHHHHHHHHcCCcc--ee--cCCCCCChHHHHHhh---cc-hhhHHHHhhh
Q 009956 429 EIFYLVALLRFPPPHEDGA-SIKKLVDQNRGIVQYCKDRGFDF--KL--FFPHYKSEEEWKCHF---GD-RWTRFRDSKK 499 (521)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ehG~g~--~~--yl~~~~~~~~~~~~y---G~-~~~~l~~iK~ 499 (521)
|+|+++....+. .++ ..++++++.+++++.++|||+|. .+ |+ ..+...| |+ .++.|++||+
T Consensus 464 nlH~~i~~~~~~----~~~~~~~~~~~~~~~l~~~~~eHGiG~~k~~~~~l------~~~~~~~~~~g~~~~~lm~~iK~ 533 (560)
T 1e8g_A 464 EMHHIVCIVFNK----KDLIQKRKVQWLMRTLIDDCAANGWGEYRTHLAFM------DQIMETYNWNNSSFLRFNEVLKN 533 (560)
T ss_dssp CEEEEEEEEEET----TCHHHHHHHHHHHHHHHHHHHHTTCCBSCCCGGGH------HHHHHHTCHHHHHHHHHHHHHHH
T ss_pred eEEEEecccCCC----CCHHHHHHHHHHHHHHHHHHHHcCCcccccchhHH------HHHHHHhccCCHHHHHHHHHHHH
Confidence 999999522211 233 67778889999999999999997 34 65 2234455 53 6899999999
Q ss_pred ccCCCCccCCCCcccC
Q 009956 500 AFDPKHILAPGQKIFS 515 (521)
Q Consensus 500 ~~DP~~IlnPgk~i~~ 515 (521)
+|||+|||||||.+..
T Consensus 534 ~~DP~gILNPGk~~~~ 549 (560)
T 1e8g_A 534 AVDPNGIIAPGKSGVW 549 (560)
T ss_dssp HHCTTCCBCTTGGGCC
T ss_pred HcCccCCCCCCccccC
Confidence 9999999999966654
No 7
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=2.6e-52 Score=447.11 Aligned_cols=443 Identities=15% Similarity=0.176 Sum_probs=308.2
Q ss_pred HhhhcCCCCeEEcCCCcchhhhhcccCCC--CCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCC-CCCCC-
Q 009956 26 ICKSLGLKGSIDFGVGATNGSADKDFGGM--YSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSIN-GQAMA- 101 (521)
Q Consensus 26 ~l~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~-g~~~~- 101 (521)
.|++......|.+++ ..+..|.+||+.. +++.|.+|++|+|++||+++|++| +++++||+++|+|||+. |++.+
T Consensus 23 ~L~~~l~~~~v~~~~-~~~~~y~~d~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a-~~~~~pv~~~g~G~~~~~g~~~~~ 100 (520)
T 1wvf_A 23 KFRALLGDDNVLVES-DQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKIC-NEHKIPIWTISTGRNFGYGSAAPV 100 (520)
T ss_dssp HHHHHHCGGGEECSH-HHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHH-HHHTCCEEEESSCCCTTTTTTSCS
T ss_pred HHHHhcCCCeEecCc-HHHHHHhcccccccccCCCCCEEEecCCHHHHHHHHHHH-HHCCCcEEEEcCCCCCCCCCCCCC
Confidence 677754556799888 8888999998864 688999999999999999999999 99999999999999987 66553
Q ss_pred -CCcEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCc-ccc-cCCCCcccccccccccccCCCCccc
Q 009956 102 -DRGLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLA-PRS-WTDYLRLTVGGTLSNAGVSGQAFRY 178 (521)
Q Consensus 102 -~~gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~-p~~-~~~~~~~tvGG~~~~~g~g~~~~~~ 178 (521)
.+|++|||++||+ |+++|+ ++.+++||||++|.+|.+++.++ |+. |++ +++...+||||+++++|.|.. +|
T Consensus 101 ~~~gvvidl~~m~~-i~~id~--~~~~v~v~aGv~~~~l~~~l~~~-Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~y 174 (520)
T 1wvf_A 101 QRGQVILDLKKMNK-IIKIDP--EMCYALVEPGVTFGQMYDYIQEN-NLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PY 174 (520)
T ss_dssp STTCEEEECTTCCC-EEEEET--TTTEEEECTTCCHHHHHHHHHHT-TCSEECCCCSSCTTCCHHHHHHTTCBCSS--TT
T ss_pred CCCeEEEECCCCCc-eEEECC--CCCEEEECCCCCHHHHHHHHHHc-CCcccCCCCCCCCeeeeeecccCCCcCCc--cc
Confidence 4899999999998 779999 78999999999999999999999 986 544 344447899999988776654 99
Q ss_pred CccccceeeeEEEecCCcEEEecC--CCCcchhhhhhccCc----------cceEEEEeEEeeEecCCceEEEEEEeCCH
Q 009956 179 GPQISNVAQLDVVTGNGDMVTCSE--SRQPELFFNVLGGLG----------QFGIITRARVLLQSAPDKVRWIRLVYAEF 246 (521)
Q Consensus 179 G~~~d~v~~~~~v~~~G~i~~~~~--~~~~dl~~~~~gs~G----------~lGiit~~~l~l~p~p~~~~~~~~~~~~~ 246 (521)
|.++|+|+++++|++||++++++. .+++|+|++.+|+.| +|||||+++|||.|.|+....+.+.|++.
T Consensus 175 G~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~ 254 (520)
T 1wvf_A 175 GEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDE 254 (520)
T ss_dssp CBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCG
T ss_pred cchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCH
Confidence 999999999999999999999974 356788777776654 99999999999999999888888999998
Q ss_pred HHHHH---HHHHHHhccCCCcccccccCeEEecCCCCc-cCCCCccCCCCCCCCCCCCCC----------CCCceEEEEE
Q 009956 247 DEFTR---DAELLVSLKEERESFDYVEGFVFVNSDDTV-NGWPSVPLDPAQVFDPAHLPQ----------TAGSVLYCLE 312 (521)
Q Consensus 247 ~~~~~---~~~~i~~~~~~p~~~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~e 312 (521)
+++.+ ++..+.+.+..|+++|+||...+....... ..+ +... ..+|. ....++++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~p~a~El~d~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (520)
T 1wvf_A 255 ADIVEIVDALRPLRMSNTIPNSVVIASTLWEAGSAHLTRAQY----TTEP-----GHTPDSVIKQMQKDTGMGAWNLYAA 325 (520)
T ss_dssp GGHHHHHHHHHHHHHTTSSCSCEEEEEHHHHHHHTTCCGGGT----CCCS-----SSCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCccceEeccHHHHHHHhcccchhh----ccCC-----CCCCHHHHHHHHHhcCCCceEEEEE
Confidence 88655 555666666778999999976431111100 000 0000 01111 0123566676
Q ss_pred EeeeeCCCCCcchhHHHHHHHHhhcCCccceeeec--cc-hhHHHHHhHHHHH--H--HhhhcccccCC--ccccccccC
Q 009956 313 VALHYNNSDPRSAVDAVVDRLLERLGFVSKLNFQV--DV-SYVDFLLRVKQVE--E--HARANGMWDSP--HPWLNMFVS 383 (521)
Q Consensus 313 ~~~~~~g~~~~~~v~~~~~~l~~~~~~~~g~~~~~--d~-~~~~~~~~~~~~~--~--~~~~~~lw~~r--~~~~d~~vp 383 (521)
+++++ ++++++.+.+.+.+....+..+.. +. ...-|..|..... . .......|... .-+.|.++|
T Consensus 326 ----~~g~~--~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~w~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~vp 399 (520)
T 1wvf_A 326 ----LYGTQ--EQVDVNWKIVTDVFKKLGKGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSE 399 (520)
T ss_dssp ----EEESH--HHHHHHHHHHHHHHHHHTCCEEEEHHHHTTCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEEE
T ss_pred ----EeCCH--HHHHHHHHHHHHHHHHcCCeEEEecccchhhhHHHHHHHhhccCchhhhhccccccCCCceEEeccccC
Confidence 45544 556666655544432111111110 00 0011111111000 0 00001112210 112466778
Q ss_pred c--chhHHHHHHHHHHhhhcCCCCcEEEEecCCCCCCCCcccccCCCceEEEEEeeCCCCCCCCcc-hHHHHHHHhHHHH
Q 009956 384 K--SNLAEFNRVVFNEILKDGINGPMLVYPLLRSKWDDRTSVMVPEEEIFYLVALLRFPPPHEDGA-SIKKLVDQNRGIV 460 (521)
Q Consensus 384 ~--~~l~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~ 460 (521)
. ++++++++.+.+.+.+.+... ...+|++|||+|+++....+. .++ ..+++.++.++++
T Consensus 400 ~~~~~l~~~~~~~~~~~~~~~~~~--------------~~~gh~gdGnlH~~i~~~~~~----~~~~~~~~~~~~~~~~~ 461 (520)
T 1wvf_A 400 ARGSECKKQAAMAKRVLHKYGLDY--------------VAEFIVAPRDMHHVIDVLYDR----TNPEETKRADACFNELL 461 (520)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCCC--------------CEEEEECSSEEEEEEEEEEET----TCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCe--------------eEeecccCcceeeeeccccCC----CCHHHHHHHHHHHHHHH
Confidence 7 999999998874333333211 244899999999998533211 122 4566778888999
Q ss_pred HHHHHcCCcc-e---ecCCCCCChHHH-HHhhcc-hhhHHHHhhhccCCCCccCCCCcccCC
Q 009956 461 QYCKDRGFDF-K---LFFPHYKSEEEW-KCHFGD-RWTRFRDSKKAFDPKHILAPGQKIFSR 516 (521)
Q Consensus 461 ~~~~ehG~g~-~---~yl~~~~~~~~~-~~~yG~-~~~~l~~iK~~~DP~~IlnPgk~i~~~ 516 (521)
+.+.+||+|. + +|+ +| ...||+ .+++|++||++|||+|||||||.+..+
T Consensus 462 ~~~~ehG~G~~k~~~~~~-------~~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGki~~~~ 516 (520)
T 1wvf_A 462 DEFEKEGYAVYRVNTRFQ-------DRVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGIDL 516 (520)
T ss_dssp HHHHHTTCCBSCCCGGGH-------HHHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGGGCCT
T ss_pred HHHHHcCCCccccChhHh-------hhhhhhcCHHHHHHHHHHHHHcCCCCCCCCCcCCCCc
Confidence 9999999998 2 254 12 445564 579999999999999999999655543
No 8
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=100.00 E-value=3.9e-52 Score=445.03 Aligned_cols=436 Identities=11% Similarity=0.041 Sum_probs=313.1
Q ss_pred hhhHhhhcCCCCeEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCC
Q 009956 23 VSTICKSLGLKGSIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAMAD 102 (521)
Q Consensus 23 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~~~ 102 (521)
+-+.|++....++|.+++ ..+..|++||+. +.+.|.+|++|+|++||+++|++| +++++||+++|+|||+.|++.+.
T Consensus 12 ~~~~L~~~~g~~~v~~~~-~~~~~y~~d~~~-~~~~p~~Vv~P~s~~eV~~iv~~a-~~~~~~v~~~GgGt~~~G~~~~~ 88 (571)
T 1f0x_A 12 FLNELARLVGSSHLLTDP-AKTARYRKGFRS-GQGDALAVVFPGSLLELWRVLKAC-VTADKIILMQAANTGLTEGSTPN 88 (571)
T ss_dssp HHHHHHHHHCGGGEECCH-HHHHHHHBCSSS-CBBCCSEEECCSSHHHHHHHHHHH-HHTTCEEEEESSCCCSSSTTSCC
T ss_pred HHHHHHHhcCCCeEEcCH-HHHHHHhccccc-cCCCccEEEeeCCHHHHHHHHHHH-HHcCCCEEEECCCcCCCCCccCC
Confidence 334788866668999998 889999999984 899999999999999999999999 99999999999999999888875
Q ss_pred C------cEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCcc-cccCC-CCcccccccccccccCCC
Q 009956 103 R------GLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLAP-RSWTD-YLRLTVGGTLSNAGVSGQ 174 (521)
Q Consensus 103 ~------gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~p-~~~~~-~~~~tvGG~~~~~g~g~~ 174 (521)
+ |++|||++||+ |+++|+ + .+++||||+++.+|.+++.++ |+.| +++++ +..+||||++++|++|..
T Consensus 89 ~~~~~r~gvvIdl~rmn~-I~~id~--~-~~v~v~aGv~l~~L~~~l~~~-Gl~~p~~~g~s~~~~tvGG~ia~nagG~~ 163 (571)
T 1f0x_A 89 GNDYDRDVVIISTLRLDK-LHVLGK--G-EQVLAYPGTTLYSLEKALKPL-GREPHSVIGSSCIGASVIGGICNNSGGSL 163 (571)
T ss_dssp BSCCSSCEEEEECTTCCC-EEEETT--T-TEEEECTTCBHHHHHHHHGGG-TEECSCCCGGGGGTCBHHHHHHTTCCCSC
T ss_pred CcCCcCceEEEECcccCC-ceeECC--C-CeEEEcCCcCHHHHHHHHHhc-CccCCcCCCccCCCceecccccCCCCccc
Confidence 3 89999999998 889996 4 679999999999999999999 9964 44533 346799999999998999
Q ss_pred CcccCcccc----------------ceeeeEEEecCCcEEEecC-----------------CCCc---------------
Q 009956 175 AFRYGPQIS----------------NVAQLDVVTGNGDMVTCSE-----------------SRQP--------------- 206 (521)
Q Consensus 175 ~~~~G~~~d----------------~v~~~~~v~~~G~i~~~~~-----------------~~~~--------------- 206 (521)
+.+||.++| +|+++++|++||++++++. ..++
T Consensus 164 ~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~ 243 (571)
T 1f0x_A 164 VQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARY 243 (571)
T ss_dssp TTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCC
T ss_pred ccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccc
Confidence 999999999 9999999999999998762 1234
Q ss_pred --chhhhh--hccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHHHHHHHHHh-ccCCCcccccccCeEEecCCCC-
Q 009956 207 --ELFFNV--LGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTRDAELLVS-LKEERESFDYVEGFVFVNSDDT- 280 (521)
Q Consensus 207 --dl~~~~--~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~p~~~~~~d~~~~~~~~~~- 280 (521)
||++++ +||+|+||| |+++||++|.|+....+.+.|++++++.+++..+.+ .+..|+++|+||...+-..+..
T Consensus 244 ~~Dl~~l~~a~GseGtlGV-t~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~a~E~~d~~~~~~~~~~~ 322 (571)
T 1f0x_A 244 NADPDRLFESSGCAGKLAV-FAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYG 322 (571)
T ss_dssp TTCGGGCCSSTTCTTSSEE-EEEEEECEECCSSCEEEEEEESCHHHHHHHHHHHHHHCSSCCSEEEEEEHHHHHHHC---
T ss_pred cccHHHHHHhcCCCCceeE-EEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhc
Confidence 999999 999999999 999999999999888888999999999999999884 6778999999997654211111
Q ss_pred ---------ccC-----------CCCccCCCCCC-C---------CC-CCCC----------CCCCceEEEEEEeeeeCC
Q 009956 281 ---------VNG-----------WPSVPLDPAQV-F---------DP-AHLP----------QTAGSVLYCLEVALHYNN 319 (521)
Q Consensus 281 ---------~~~-----------~~~~~~~~~~~-~---------~~-~~~~----------~~~~~~~~~~e~~~~~~g 319 (521)
... |...++.+... + .+ .-+| .+...+++++| +.+
T Consensus 323 ~~~~~~i~~~~~~~~p~~~~~k~~~~~~~~~~p~l~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~llve----~~g 398 (571)
T 1f0x_A 323 KDTFLMIDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLK----MAG 398 (571)
T ss_dssp ------------------------------------------------------CCHHHHHHHHHCSEEEEEE----ECT
T ss_pred ccccccccccCcccccchhcccchhhhhhcccccccccchhhhhhhhhhccccccchhhhcccccCceEEEEE----Eec
Confidence 000 00000000000 0 00 0001 01134677888 556
Q ss_pred CCCcchhHHHHHHHHhhcCCccceee--eccchhHHHHHhHHHHHHHhhhcccccCCc---------cccccccCcchhH
Q 009956 320 SDPRSAVDAVVDRLLERLGFVSKLNF--QVDVSYVDFLLRVKQVEEHARANGMWDSPH---------PWLNMFVSKSNLA 388 (521)
Q Consensus 320 ~~~~~~v~~~~~~l~~~~~~~~g~~~--~~d~~~~~~~~~~~~~~~~~~~~~lw~~r~---------~~~d~~vp~~~l~ 388 (521)
.+. ++.++.++++++... |... ..+.....|+.|...+ ..+|.+|. -..|++||+++++
T Consensus 399 ~~~-~~~~~~l~~~~~~~~---g~~~~~~~~~~~~~~~~R~~~~------~~~~~~r~~~~~~~g~~~~~Dvavp~~~l~ 468 (571)
T 1f0x_A 399 DGV-GEAKSWLVDYFKQAE---GDFFVCTPEEGSKAFLHRFAAA------GAAIRYQAVHSDEVEDILALDIALRRNDTE 468 (571)
T ss_dssp THH-HHHHHHHHHHHHHSS---CEEEECCHHHHHHHHHHHTTHH------HHHHHHHHHTTTTEEEEEEEEEECCTTCSC
T ss_pred CcH-HHHHHHHHHHHHHcC---CCeeecCccHHHHHHHHhhhhh------hHHHHhhhcchhhcCCceEEEEEecHHHhH
Confidence 553 456677788887762 3221 1122222333222111 01132221 2359999999999
Q ss_pred HHHHHHHHHhhhcCCCCcEEEEecCCCCCCCCcccccCCCceEEEEEeeCCCCCCCCcchHHHH-HHHhHHHHH----HH
Q 009956 389 EFNRVVFNEILKDGINGPMLVYPLLRSKWDDRTSVMVPEEEIFYLVALLRFPPPHEDGASIKKL-VDQNRGIVQ----YC 463 (521)
Q Consensus 389 ~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~----~~ 463 (521)
++ +.+.+.+.+.. +.. ...+|++++++|+++....+. +.+++ .++.+.+.+ ++
T Consensus 469 ~~-~~~~~~l~~~~----~~~----------~~~GH~g~g~~H~~~~~~~~~-------~~~~i~~~~~~~v~~~GGsis 526 (571)
T 1f0x_A 469 WY-EHLPPEIDSQL----VHK----------LYYGHFMCYVFHQDYIVKKGV-------DVHALKEQMLELLQQRGAQYP 526 (571)
T ss_dssp CS-CCCCHHHHTTE----EEE----------EEEEETTTTEEEEEEEEETTC-------CHHHHHHHHHHHHHHTTCBSC
T ss_pred HH-HHHHHHHHhhC----ccc----------eeEEEEcCCceEEeeecCCch-------hHHHHHHHHHHHHHHcCCeEE
Confidence 99 77764333221 111 134999999999988875311 22222 333344444 78
Q ss_pred HHcCCcceecCCCCCChHHHHHhhcchhhHHHHhhhccCCCCccCCCCcccCCCCC
Q 009956 464 KDRGFDFKLFFPHYKSEEEWKCHFGDRWTRFRDSKKAFDPKHILAPGQKIFSRISN 519 (521)
Q Consensus 464 ~ehG~g~~~yl~~~~~~~~~~~~yG~~~~~l~~iK~~~DP~~IlnPgk~i~~~~~~ 519 (521)
+|||+|.. |. . . .. |++||++|||+|||||||.+.++..|
T Consensus 527 aEHGvG~~-~~----~-~---------~~-m~~iK~~~DP~~ilNPGk~~t~~~~~ 566 (571)
T 1f0x_A 527 AEHNVGHL-YK----A-P---------ET-LQKFYRENDPTNSMNPGIGKTSKRKN 566 (571)
T ss_dssp SSSCCTTT-SC----C-C---------HH-HHHHHHHHCTTCCBSTTTTTCCCSSC
T ss_pred eeccCCcc-cC----C-H---------HH-HHHHHHHhCCCCCCCCCcCcCCcccc
Confidence 89999995 21 1 1 23 99999999999999999877776654
No 9
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=4.1e-42 Score=366.60 Aligned_cols=229 Identities=17% Similarity=0.195 Sum_probs=189.0
Q ss_pred CchhhhHhhhcCCCCeEEcCCCcchhhh----hc--ccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCC
Q 009956 20 NDDVSTICKSLGLKGSIDFGVGATNGSA----DK--DFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGH 93 (521)
Q Consensus 20 ~~~~~~~l~~~~~~~~v~~~~~~~~~~~----~~--~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~ 93 (521)
++.++ +|.+....+.|+++.+..+... .. -|+.....+|.+||+|+|++||+++|++| +++++||++|||||
T Consensus 9 ~~f~~-~L~~~~~~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a-~~~~~~~~~r~gGh 86 (500)
T 3tsh_A 9 EDFLG-CLVKEIPPRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCG-RRHSVRIRVRSGGH 86 (500)
T ss_dssp CHHHH-HHHHHSCGGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHH-HHTTCEEEEESSCC
T ss_pred HHHHH-HHHhhCCCCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHH-HHCCCcEEEEcCCc
Confidence 45555 8988666677887764454332 22 27776788999999999999999999999 99999999999999
Q ss_pred CCCCCCCC----CCcEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCc-ccccCCCCcccccccccc
Q 009956 94 SINGQAMA----DRGLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLA-PRSWTDYLRLTVGGTLSN 168 (521)
Q Consensus 94 ~~~g~~~~----~~gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~-p~~~~~~~~~tvGG~~~~ 168 (521)
++.|.+.. .+|++|||++||+ +++|+ +.++++||||++|.+|++++.++ |+. ....+.++.++|||.+++
T Consensus 87 ~~~g~s~~~~~~~~~~~idl~~~~~--v~~d~--~~~~~~v~~G~~~~~~~~~l~~~-g~~~~~~~g~~~~vgvgG~~~~ 161 (500)
T 3tsh_A 87 DYEGLSYRSLQPETFAVVDLNKMRA--VWVDG--KARTAWVDSGAQLGELYYAIYKA-SPTLAFPAGVCPTIGVGGNFAG 161 (500)
T ss_dssp CTTCTTTCCSSSCCEEEEECTTCCC--EEEET--TTTEEEEETTSBHHHHHHHHHHH-CTTEECCCCSSTTSBHHHHHHT
T ss_pred CCCCCcCCCCCcCCeEEEECcCCCC--EEECC--CCCEEEEccCcCHHHHHHHHHHh-CCCcccCCCCCCCceecCcccc
Confidence 98876532 4789999999996 69999 88999999999999999999999 863 334456678899999999
Q ss_pred cccCCCCcccCccccceeeeEEEecCCcEEEecCCCCcchhhhhhc-cCccceEEEEeEEeeEecCCceEEEEEEeCCHH
Q 009956 169 AGVSGQAFRYGPQISNVAQLDVVTGNGDMVTCSESRQPELFFNVLG-GLGQFGIITRARVLLQSAPDKVRWIRLVYAEFD 247 (521)
Q Consensus 169 ~g~g~~~~~~G~~~d~v~~~~~v~~~G~i~~~~~~~~~dl~~~~~g-s~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~ 247 (521)
+|+|..+.+||.++|+|++++||++||++++.+ .+++||||+++| ++|+|||||+++||++|.|+....+...+...+
T Consensus 162 gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~-~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~ 240 (500)
T 3tsh_A 162 GGFGMLLRKYGIAAENVIDVKLVDANGKLHDKK-SMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSE 240 (500)
T ss_dssp CCCCTTHHHHCCGGGGEEEEEEECTTSCEECHH-HHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTT
T ss_pred ccCCccccccCChhhheeeEEEECCCceEEECC-CCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHH
Confidence 999999999999999999999999999987554 467899999995 568999999999999999987766666665545
Q ss_pred HHHHHHHHH
Q 009956 248 EFTRDAELL 256 (521)
Q Consensus 248 ~~~~~~~~i 256 (521)
.+.+.+...
T Consensus 241 ~~~~~~~~~ 249 (500)
T 3tsh_A 241 GAVDIINKW 249 (500)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555544443
No 10
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=4.9e-42 Score=362.08 Aligned_cols=227 Identities=18% Similarity=0.237 Sum_probs=192.7
Q ss_pred hhhHhhhcCCCCeEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCC--
Q 009956 23 VSTICKSLGLKGSIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAM-- 100 (521)
Q Consensus 23 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~-- 100 (521)
+.+||.+.. ..|+++.+..+....+.|+.++.+.|.+|++|+|++||+++|++| +++++|+++||||||+.+.+.
T Consensus 3 l~~cl~~~~--~~v~~p~~~~y~~~~~~~n~~~~~~p~~vv~P~s~~dv~~~v~~a-~~~~~~v~v~ggGh~~~g~~~~~ 79 (473)
T 3rja_A 3 IEACLSAAG--VPIDIPGTADYERDVEPFNIRLPYIPTAIAQTQTTAHIQSAVQCA-KKLNLKVSAKSGGHSYASFGFGG 79 (473)
T ss_dssp HHHHHHHTT--CCBCCTTSHHHHHHTCCSBTTSCCCCSEEEECCSHHHHHHHHHHH-HHTTCCEEEESSCCCTTCGGGTS
T ss_pred HHHHHHhCC--CcEECCCCCchHHHHHHhhcccCCCCCEEEEeCCHHHHHHHHHHH-HHcCCeEEEEcCCCCCCCCcccC
Confidence 445777633 256666646788888889988999999999999999999999999 999999999999999986443
Q ss_pred CCCcEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCC-CcccccCCCCcccccccccccccCCCCcccC
Q 009956 101 ADRGLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFG-LAPRSWTDYLRLTVGGTLSNAGVSGQAFRYG 179 (521)
Q Consensus 101 ~~~gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g-~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G 179 (521)
..++++|||++||+ +.++|+ ++.+++||||++|.+|++++.++ | +..+. +.++.++|||.++++|+|..+.+||
T Consensus 80 ~~~~vvIdl~~~~~-i~~vd~--~~~~v~v~aG~~~~~l~~~l~~~-G~~~~p~-G~~~~vgvgG~~~ggg~G~~~~~~G 154 (473)
T 3rja_A 80 ENGHLMVQLDRMID-VISYND--KTGIAHVEPGARLGHLATVLNDK-YGRAISH-GTCPGVGISGHFAHGGFGFSSHMHG 154 (473)
T ss_dssp SSSCEEEECTTCCC-EEEEET--TTTEEEECTTCBHHHHHHHHHHH-HSEECCC-CSCTTCBHHHHHHTCCCCTTHHHHC
T ss_pred CCCeEEEECCCCCc-eEEEcC--CCCEEEECCCCCHHHHHHHHHHc-CCEEecc-CCCCCcEeeeeccCCCCCccccccc
Confidence 24789999999997 666999 78999999999999999999999 7 65333 5566789999999999999999999
Q ss_pred ccccceeeeEEEecCCcEEEecCCCCcchhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCC--HHHHHHHHHHHH
Q 009956 180 PQISNVAQLDVVTGNGDMVTCSESRQPELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAE--FDEFTRDAELLV 257 (521)
Q Consensus 180 ~~~d~v~~~~~v~~~G~i~~~~~~~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~--~~~~~~~~~~i~ 257 (521)
.++|+|+++++|++||+++++++.+++||||+++|++|+|||||+++|||+|.|+....+.+.|+. .+++.+.+..+.
T Consensus 155 ~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (473)
T 3rja_A 155 LAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVE 234 (473)
T ss_dssp CGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHH
T ss_pred chHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHH
Confidence 999999999999999999999988899999999999999999999999999999876666555542 344444444443
No 11
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=2.2e-41 Score=358.50 Aligned_cols=225 Identities=20% Similarity=0.230 Sum_probs=185.4
Q ss_pred Hhhhc-----CCCCeEEcCCCcchhhhhc------ccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCC
Q 009956 26 ICKSL-----GLKGSIDFGVGATNGSADK------DFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHS 94 (521)
Q Consensus 26 ~l~~~-----~~~~~v~~~~~~~~~~~~~------~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~ 94 (521)
||... .+.+.|++..+..+..... .|+......|.+|++|+|++||+++|++| +++++||++||||||
T Consensus 10 c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a-~~~~~~v~vrggGh~ 88 (518)
T 3vte_A 10 CFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCS-KKVGLQIRTRSGGHD 88 (518)
T ss_dssp HHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHH-HHHTCEEEEESSCCC
T ss_pred HHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHH-HHcCCcEEEECCCcC
Confidence 76542 2478888877566765432 47776789999999999999999999999 999999999999999
Q ss_pred CCCCCC--CCCcEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhC-CCcccccCCCCccccccccccccc
Q 009956 95 INGQAM--ADRGLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDF-GLAPRSWTDYLRLTVGGTLSNAGV 171 (521)
Q Consensus 95 ~~g~~~--~~~gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~-g~~p~~~~~~~~~tvGG~~~~~g~ 171 (521)
+.|.+. ..+|++|||++||+ |++|+ ++.+++||||+++.+|++++.+++ |+..+ .+.++.++|||.++++|+
T Consensus 89 ~~g~~~~~~~~gvvIdl~~l~~--i~vd~--~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~-~G~~~~vgvgG~~~gGg~ 163 (518)
T 3vte_A 89 AEGMSYISQVPFVVVDLRNMHS--IKIDV--HSQTAWVEAGATLGEVYYWINEKNENLSFP-GGYCPTVGVGGHFSGGGY 163 (518)
T ss_dssp TTCTTTCCSSSEEEEECTTCCC--EEEET--TTTEEEEETTCBHHHHHHHHHHHCTTEECC-CCSCTTCBHHHHHHTCCC
T ss_pred CCCCccCCCCCeEEEECCCCce--eEEeC--CCCEEEEeCCccHHHHHHHHHHhCCCceec-CCCCCCeeeeeeeCCCCC
Confidence 998874 35799999999997 59999 788999999999999999999871 34322 344557899999999999
Q ss_pred CCCCcccCccccceeeeEEEecCCcEEEecCCCCcchhhhhhcc-CccceEEEEeEEeeEecCCceEEEEEEeC-CHHHH
Q 009956 172 SGQAFRYGPQISNVAQLDVVTGNGDMVTCSESRQPELFFNVLGG-LGQFGIITRARVLLQSAPDKVRWIRLVYA-EFDEF 249 (521)
Q Consensus 172 g~~~~~~G~~~d~v~~~~~v~~~G~i~~~~~~~~~dl~~~~~gs-~G~lGiit~~~l~l~p~p~~~~~~~~~~~-~~~~~ 249 (521)
|..+.+||.++|+|++++||++||++++. ..+++||||+++|| +|+|||||+++|||+|.|+....+.+.+. +.+++
T Consensus 164 G~~s~~~G~~~D~V~~~evV~adG~iv~~-~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~ 242 (518)
T 3vte_A 164 GALMRNYGLAADNIIDAHLVNVDGKVLDR-KSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGL 242 (518)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTCCEECH-HHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHH
T ss_pred ccccCCCCchhheEEEEEEEccCCeEEEe-eccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHH
Confidence 99999999999999999999999999965 33578999999998 89999999999999999987665555553 44555
Q ss_pred HHHHHHHH
Q 009956 250 TRDAELLV 257 (521)
Q Consensus 250 ~~~~~~i~ 257 (521)
.+.+....
T Consensus 243 ~~~l~~~~ 250 (518)
T 3vte_A 243 VKLFNKWQ 250 (518)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 12
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=4.6e-41 Score=355.30 Aligned_cols=443 Identities=16% Similarity=0.175 Sum_probs=277.1
Q ss_pred HhhhcCC--CCeEEcCCCcchhhhh------cccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCC
Q 009956 26 ICKSLGL--KGSIDFGVGATNGSAD------KDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSING 97 (521)
Q Consensus 26 ~l~~~~~--~~~v~~~~~~~~~~~~------~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g 97 (521)
||..... .+.|+++.+..+.... ..|+......|.+|++|+|++||+++|++| +++++||++||+|||+.|
T Consensus 5 cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a-~~~~~~v~vrGgGh~~~g 83 (495)
T 3fw9_A 5 CLTFNGVRNHTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCI-RKGSWTIRLRSGGHSYEG 83 (495)
T ss_dssp HHHHTTCCCEEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHH-HTSSCEEEEESSCCCTTC
T ss_pred HHhhcCCCCCCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHH-HHcCCeEEEECCCcCCCC
Confidence 6665322 4567776655666542 356666788999999999999999999999 999999999999999988
Q ss_pred CCCCC--CcEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhC-CCcccccCCCCcccccccccccccCCC
Q 009956 98 QAMAD--RGLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDF-GLAPRSWTDYLRLTVGGTLSNAGVSGQ 174 (521)
Q Consensus 98 ~~~~~--~gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~-g~~p~~~~~~~~~tvGG~~~~~g~g~~ 174 (521)
.+... +|++|||++||+ |++|+ ++.+++||||+++.+|++++.+++ |+..+ .+.+..++|||.++++|+|..
T Consensus 84 ~~~~~~~ggvvIdl~~m~~--i~vd~--~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~-~G~~~~vgigG~~~gGg~G~~ 158 (495)
T 3fw9_A 84 LSYTSDTPFILIDLMNLNR--VSIDL--ESETAWVESGSTLGELYYAITESSSKLGFT-AGWCPTVGTGGHISGGGFGMM 158 (495)
T ss_dssp TTSCCSSCEEEEECTTCCC--EEEET--TTTEEEEETTCBHHHHHHHHHHHCSSEECC-CCSCTTCBHHHHHHTCCCCTT
T ss_pred ccccCCCCeEEEECCCCCc--EEEeC--CCCEEEEcCCCCHHHHHHHHHHhcCCceec-cCCCCCCeEeeeccCCCCccc
Confidence 87652 589999999997 59999 789999999999999999999882 34322 245567899999999999999
Q ss_pred CcccCccccceeeeEEEecCCcEEEecCCCCcchhhhhhc-cCccceEEEEeEEeeEecCCceEEEEEEeC-CHHHHHHH
Q 009956 175 AFRYGPQISNVAQLDVVTGNGDMVTCSESRQPELFFNVLG-GLGQFGIITRARVLLQSAPDKVRWIRLVYA-EFDEFTRD 252 (521)
Q Consensus 175 ~~~~G~~~d~v~~~~~v~~~G~i~~~~~~~~~dl~~~~~g-s~G~lGiit~~~l~l~p~p~~~~~~~~~~~-~~~~~~~~ 252 (521)
+.+||.++|+|+++++|++||++++ +..+++||||+++| ++|+|||||+++|||+|.|+....+.+.++ +.+++.+.
T Consensus 159 ~~~~G~~~D~v~~~~vV~adG~i~~-~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~ 237 (495)
T 3fw9_A 159 SRKYGLAADNVVDAILIDANGAILD-RQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSL 237 (495)
T ss_dssp HHHHCCGGGGEEEEEEECTTCCEEC-HHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHH
T ss_pred ccCCCchhheEEEEEEEcCCCCEEE-cCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHH
Confidence 9999999999999999999999997 44468899999999 789999999999999999998776666664 34555555
Q ss_pred HHHHHhccCCCcccccccCeEEecCCCCccCCCCccCCCCCCCCCCCCCCCCCceEEEEEEeeeeCCCCCcchhHHHHHH
Q 009956 253 AELLVSLKEERESFDYVEGFVFVNSDDTVNGWPSVPLDPAQVFDPAHLPQTAGSVLYCLEVALHYNNSDPRSAVDAVVDR 332 (521)
Q Consensus 253 ~~~i~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~g~~~~~~v~~~~~~ 332 (521)
+....+.. .-++....+. + . . .+. .. .. .+.+...|.|+. +++.+.++.
T Consensus 238 l~~~~~~~------~~~~~~l~~~---~--------~-~--------~~~-~~-~~-~~~~~~~~~G~~--~~~~~~l~~ 286 (495)
T 3fw9_A 238 LHKWQFVA------EELEEDFTLS---V--------L-G--------GAD-EK-QV-WLTMLGFHFGLK--TVAKSTFDL 286 (495)
T ss_dssp HHHHHHHH------HHSCTTEEEE---E--------E-E--------EEE-TT-EE-EEEEEEEESSCH--HHHHHHHHH
T ss_pred HHHHHHHH------hcCChhHeEE---E--------E-E--------cCC-CC-ce-EEEEEEEEeCCH--HHHHHHHHH
Confidence 54443221 0011111100 0 0 0 001 11 11 122223366655 444444444
Q ss_pred HHhhcCCccceeeeccchhHHHHHhHHH---HHHHhhh-----cccccCCccccccccCcchhHHHHHHHHHHhhhcCCC
Q 009956 333 LLERLGFVSKLNFQVDVSYVDFLLRVKQ---VEEHARA-----NGMWDSPHPWLNMFVSKSNLAEFNRVVFNEILKDGIN 404 (521)
Q Consensus 333 l~~~~~~~~g~~~~~d~~~~~~~~~~~~---~~~~~~~-----~~lw~~r~~~~d~~vp~~~l~~~~~~~~~~l~~~~~~ 404 (521)
.+..++.... ...+.+|......+.. ....... ...|..+..++.-.+|.+.+..+++.+.+ . ..
T Consensus 287 ~~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~----~-~~ 359 (495)
T 3fw9_A 287 LFPELGLVEE--DYLEMSWGESFAYLAGLETVSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSK----E-PN 359 (495)
T ss_dssp HCGGGCCCGG--GCEEECHHHHHHHHTTCSCGGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHH----C-TT
T ss_pred hhhhcCCCcc--ceEEcCHHHHHHHHhcccchhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhh----C-CC
Confidence 4433321111 1123333322110000 0000000 01111111222334666777776665442 1 13
Q ss_pred CcEEEEecCCCCC--CCCcccccC-CCceEEEEEeeCCCCCCCCcchHHHHHHHhHHHHHHHHHcCCc--ceecCCC---
Q 009956 405 GPMLVYPLLRSKW--DDRTSVMVP-EEEIFYLVALLRFPPPHEDGASIKKLVDQNRGIVQYCKDRGFD--FKLFFPH--- 476 (521)
Q Consensus 405 ~~i~~~~~~~~~~--~~~~~~~~~-dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ehG~g--~~~yl~~--- 476 (521)
..+.++++++..- ......+.. ++. .|.+.+.. .|.++..+..+...+..+.+++..+.+..+ ...|++.
T Consensus 360 ~~~~~~~~GGa~~~v~~~~TAf~hR~~~-~~~~~~~~-~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~ 437 (495)
T 3fw9_A 360 GFIALNGFGGQMSKISSDFTPFPHRSGT-RLMVEYIV-AWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDL 437 (495)
T ss_dssp EEEEEEECCGGGGTSCTTTSSCCCCTTC-CEEEEEEE-EECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCG
T ss_pred cEEEecccCCccccCCCCCCCccccCcc-ceEEEEEE-ecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCc
Confidence 4577888886111 001111111 222 23322221 121100013344456667777755555332 1234433
Q ss_pred CCC----------------hHHH-HHhhcchhhHHHHhhhccCCCCccCCCCcccC
Q 009956 477 YKS----------------EEEW-KCHFGDRWTRFRDSKKAFDPKHILAPGQKIFS 515 (521)
Q Consensus 477 ~~~----------------~~~~-~~~yG~~~~~l~~iK~~~DP~~IlnPgk~i~~ 515 (521)
..+ ...| +++||+||++|++||++|||+|+|+..|.|.+
T Consensus 438 dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~RL~~vK~~yDP~n~F~~~qsI~p 493 (495)
T 3fw9_A 438 DLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPP 493 (495)
T ss_dssp GGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cccccccccccccccccchhhhhHHHHhHhHHHHHHHHHHhhCcHhhCCCCCCCCC
Confidence 111 1357 78999999999999999999999999988863
No 13
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=4e-40 Score=347.63 Aligned_cols=221 Identities=25% Similarity=0.377 Sum_probs=193.7
Q ss_pred cCCCCeEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCCcEEEEc
Q 009956 30 LGLKGSIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAMADRGLVIDM 109 (521)
Q Consensus 30 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~~~~gvvidl 109 (521)
+.+.+.|+++.+..+....+.|+..+.+.|.+|++|+|++||+++|++| +++++|++++|+|||+.+.+...+|++|||
T Consensus 10 l~~~~~v~~p~~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a-~~~~~~~~v~ggGh~~~~~~~~~~gvvi~l 88 (459)
T 2bvf_A 10 LSIQGEVIYPDDSGFDAIANIWDGRHLQRPSLIARCLSAGDVAKSVRYA-CDNGLEISVRSGGHNPNGYATNDGGIVLDL 88 (459)
T ss_dssp CCCSSEEECTTSTTHHHHHCCSCTTCCCCCSEEEECCSHHHHHHHHHHH-HHHTCCEEEESSCCCTTCTTCCSSSEEEEC
T ss_pred ccCCceEECCCCccHHHHHHHhhhhccCCCCEEEecCCHHHHHHHHHHH-HHcCCcEEEEcCCcCCCCccccCCeEEEEC
Confidence 3567889987756788778889988999999999999999999999999 999999999999999998776568999999
Q ss_pred CCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCcccccCCCCcccccccccccccCCCCcccCccccceeeeE
Q 009956 110 GSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISNVAQLD 189 (521)
Q Consensus 110 ~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~ 189 (521)
++||+ |++|+ ++.+++||||++|.+|++++.++ |+..+. +.++.++|||.+.++|+|..+.+||.++|+|++++
T Consensus 89 ~~l~~--i~~d~--~~~~v~v~aG~~~~~l~~~l~~~-Gl~~~~-g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~ 162 (459)
T 2bvf_A 89 RLMNS--IHIDT--AGSRARIGGGVISGDLVKEAAKF-GLAAVT-GMHPKVGFCGLALNGGVGFLTPKYGLASDNILGAT 162 (459)
T ss_dssp TTCCC--EEEET--TTTEEEEETTCBHHHHHHHHHTT-TEEECC-CSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEE
T ss_pred CCCCC--EEECC--CCCEEEECCCCCHHHHHHHHHHc-CCEecC-CCCCCcccceeecCCCCccccccccCHhHhEEEEE
Confidence 99997 59998 78899999999999999999999 997544 44567899999999999999999999999999999
Q ss_pred EEecCCcEEEecCCCCcchhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCC--HH--HHHHHHHHHH
Q 009956 190 VVTGNGDMVTCSESRQPELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAE--FD--EFTRDAELLV 257 (521)
Q Consensus 190 ~v~~~G~i~~~~~~~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~--~~--~~~~~~~~i~ 257 (521)
+|++||+++++++.+++||||+++||+|+|||||+++||++|.|.......+.|+. .+ ++.+....+.
T Consensus 163 vV~~~G~i~~~~~~~~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (459)
T 2bvf_A 163 LVTATGDVIYCSDDERPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDAL 234 (459)
T ss_dssp EECTTSCEEEEESSSSHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHH
T ss_pred EEcCCCeEEEeCCCCChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHH
Confidence 99999999999998899999999999999999999999999997666666666764 33 4444444443
No 14
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=3.7e-40 Score=349.18 Aligned_cols=207 Identities=18% Similarity=0.226 Sum_probs=178.2
Q ss_pred CCCCeEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCCC-CCcEEEEc
Q 009956 31 GLKGSIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAMA-DRGLVIDM 109 (521)
Q Consensus 31 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~~-~~gvvidl 109 (521)
.+++.|++..+..+....+.|+.++...|.+|++|+|++||+++|++| +++++||++||+|||+.+.+.+ .+|++|||
T Consensus 7 s~~~~~~~p~~~~y~~~~~~~n~~~~~~P~~vv~P~s~~dV~~~v~~a-~~~~~~v~vrggGh~~~g~~~~~~~gvvIdl 85 (501)
T 3pop_A 7 SVPPFTVGREDPRYIELSHSDNHRFVVEPEEFFLPATPDDVVASLQKA-VTEGRGVACRSGGHCGQDFVGTPRRDLVLDL 85 (501)
T ss_dssp --CCEEEETTSTTHHHHTCCSCTTSCCCCSEEEECSSHHHHHHHHHHH-HHTTCCEEEESSCCCSSSTTTSSCCSEEEEC
T ss_pred cCCCceECCCCcchHHHHHHHhhccCCCCCEEEEeCCHHHHHHHHHHH-HHcCCeEEEEeCCccCCCccccCCCEEEEEe
Confidence 677888887767888888889988999999999999999999999999 9999999999999999988876 46999999
Q ss_pred CCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHH-HhCCCcccccCCCCcccccccccccccCCCCcccCccccceeee
Q 009956 110 GSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCV-EDFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISNVAQL 188 (521)
Q Consensus 110 ~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~-~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~ 188 (521)
++||+ |++|+ ++.+++||||+++.+|++++. ++ |+..+. +.+..++|||.++++|+|..+.+||.++|+|+++
T Consensus 86 ~~l~~--i~vd~--~~~~v~v~aG~~~~~l~~~l~~~~-Gl~~~~-G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~ 159 (501)
T 3pop_A 86 HNLHA--IGPAA--DGAGVRVGSGATVDQVQKALFRRW-NAALPL-GACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAV 159 (501)
T ss_dssp TTCCC--EEECT--TSSSEEEETTCBHHHHHHHHHHHH-SBCCCC-CSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEE
T ss_pred cccCC--eEEcC--CCCEEEEECCcCHHHHHHHHHhhc-CeEeCC-CCCCCceEeeccccCCCcccccccccHHHhEEEE
Confidence 99997 69998 788999999999999999997 57 986443 4455778999999999999999999999999999
Q ss_pred EEEe--cCCc--EEEec---CCCCcchhhhhhcc-CccceEEEEeEEee----------EecCC-ceEEEEEEeC
Q 009956 189 DVVT--GNGD--MVTCS---ESRQPELFFNVLGG-LGQFGIITRARVLL----------QSAPD-KVRWIRLVYA 244 (521)
Q Consensus 189 ~~v~--~~G~--i~~~~---~~~~~dl~~~~~gs-~G~lGiit~~~l~l----------~p~p~-~~~~~~~~~~ 244 (521)
+||+ +||+ +++++ ..+++||||+++|+ +|+|||||+++||+ .|.++ ......+.|+
T Consensus 160 evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~ 234 (501)
T 3pop_A 160 EVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFP 234 (501)
T ss_dssp EEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEE
T ss_pred EEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEc
Confidence 9999 8999 56663 35678999999998 79999999999998 66543 4444455664
No 15
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=2.9e-38 Score=337.44 Aligned_cols=205 Identities=20% Similarity=0.246 Sum_probs=175.1
Q ss_pred CCeEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCCC-CCcEEEEcCC
Q 009956 33 KGSIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAMA-DRGLVIDMGS 111 (521)
Q Consensus 33 ~~~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~~-~~gvvidl~~ 111 (521)
...|+++.+..+....+.|+.++.+.|.+|++|+|++||+++|++| +++++||++||+|||+.+.+.. .+|++|||++
T Consensus 33 ~~~v~~p~~~~Y~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a-~~~~~~v~v~ggGh~~~g~~~~~~~gvvIdl~~ 111 (530)
T 2y3s_A 33 HIDSVAPGDIRYEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRA-VRSGKRVAVRSGGHCYEDFVANSDVRVVMDMSR 111 (530)
T ss_dssp -CCEECTTSTTHHHHTCCSCTTCCCCCSEEEECCSHHHHHHHHHHH-HHTTCCEEEESSCCCSSSTTTCTTCCEEEECTT
T ss_pred CceEECCCCccHHHHHhHhhhhccCCCCEEEecCCHHHHHHHHHHH-HHcCCcEEEECCCCCCCCCcccCCCeEEEEccc
Confidence 3456776656788888889888899999999999999999999999 9999999999999999987764 4799999999
Q ss_pred CCCeeEEEeccCCceEEEEeCCccHHHHHHHHHH-hCCCcccccCCCCcccccccccccccCCCCcccCccccceeeeEE
Q 009956 112 TGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVE-DFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISNVAQLDV 190 (521)
Q Consensus 112 l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~-~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~~ 190 (521)
||+ |++|+ ++.+|+||||++|.+|++++.+ + |+..+. +.++.++|||.++++|+|..+.+||.++|+|++++|
T Consensus 112 l~~--i~~d~--~~~~v~v~aG~~~~~l~~~l~~~~-Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ev 185 (530)
T 2y3s_A 112 LSA--VGFDE--ERGAFAVEAGATLGAVYKTLFRVW-GVTLPG-GACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEV 185 (530)
T ss_dssp CCC--EEEET--TTTEEEEETTCBHHHHHHHHHHHH-SCCCCC-CSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEE
T ss_pred CCC--EEEcC--CCCEEEEeCCCCHHHHHHHHHhhc-CeEEeC-CCCCCCCcCCCcCCCCCCcccccccchhhheeeEEE
Confidence 997 59999 7789999999999999999985 8 986443 555678999999999999999999999999999999
Q ss_pred Ee--cCCcEEE--ecCC-CCcc--hhhhhhcc-CccceEEEEeEEee------------EecCC-ceEEEEEEeC
Q 009956 191 VT--GNGDMVT--CSES-RQPE--LFFNVLGG-LGQFGIITRARVLL------------QSAPD-KVRWIRLVYA 244 (521)
Q Consensus 191 v~--~~G~i~~--~~~~-~~~d--l~~~~~gs-~G~lGiit~~~l~l------------~p~p~-~~~~~~~~~~ 244 (521)
|+ ++|++++ +++. +++| |||+++|+ +|+|||||+++||+ +|.|+ ......+.|+
T Consensus 186 V~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 260 (530)
T 2y3s_A 186 VVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWP 260 (530)
T ss_dssp EEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEE
T ss_pred EEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEec
Confidence 99 5599844 4654 5555 99999986 69999999999999 89875 3444555553
No 16
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=7.1e-39 Score=340.95 Aligned_cols=213 Identities=18% Similarity=0.280 Sum_probs=178.9
Q ss_pred eEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCCC--CCcEEEEcCCC
Q 009956 35 SIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAMA--DRGLVIDMGST 112 (521)
Q Consensus 35 ~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~~--~~gvvidl~~l 112 (521)
.+.+..+..+....+.|+..+.+.|.+|++|+|++||+++|++| +++++|+++||||||+.+.+.+ .+|++|||++|
T Consensus 19 ~~~~~~~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a-~~~~~~~~v~ggGh~~~~~~~~~~~~gvvIdl~~l 97 (503)
T 1zr6_A 19 EFHEEDSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCG-LDAGVQISAKGGGHSYGSYGFGGEDGHLMLELDRM 97 (503)
T ss_dssp EECCTTSHHHHHHTSCSBGGGCCCCSEEEECCSHHHHHHHHHHH-HHHTCCEEEESSCCCTTCTTTTSSSSCEEEECTTC
T ss_pred eecCCCccchHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHH-HHcCCeEEEECCCcCCCCCcccCCCCcEEEECccC
Confidence 45554434566666778877899999999999999999999999 9999999999999999986654 46899999999
Q ss_pred CCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCcccccCCCCcccccccccccccCCCCcccCccccceeeeEEEe
Q 009956 113 GDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISNVAQLDVVT 192 (521)
Q Consensus 113 ~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~~v~ 192 (521)
|+ |++|. +.+++||||++|.+|++++.+++|+..+. +.++.++|||.+.++|+|..+.+||.++|+|++++||+
T Consensus 98 ~~--i~~d~---~~~v~v~aG~~~~~l~~~l~~~~gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~ 171 (503)
T 1zr6_A 98 YR--VSVDD---NNVATIQGGARLGYTALELLDQGNRALSH-GTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVL 171 (503)
T ss_dssp CC--EEECT---TSCEEEETTCBHHHHHHHHHHTTSEECCC-CSCTTSBHHHHHHHCCCSTTHHHHCCGGGGEEEEEEEC
T ss_pred CC--EEECC---CCeEEEecCCCHHHHHHHHHHcCCEEeCC-CCCCcCchhhhhcCCCCCcccccccChhheEEEEEEEe
Confidence 97 48882 36899999999999999997773575433 34456789999999999999999999999999999999
Q ss_pred cCCcEEEecCCCCcchhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeC-CHHHHHHHHH
Q 009956 193 GNGDMVTCSESRQPELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYA-EFDEFTRDAE 254 (521)
Q Consensus 193 ~~G~i~~~~~~~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~-~~~~~~~~~~ 254 (521)
+||+++++++.+++||||+++||+|+|||||+++||++|.|+....+.+.|. +.+++.+.+.
T Consensus 172 a~G~i~~~~~~~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (503)
T 1zr6_A 172 ADASIVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLK 234 (503)
T ss_dssp TTSCEEEEBTTBSHHHHHHHTTCCSSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHH
T ss_pred cCCCEEEeCCCCCccHHHHHhccCCCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHH
Confidence 9999999998889999999999999999999999999999986655555553 2334444443
No 17
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=2.7e-38 Score=337.59 Aligned_cols=215 Identities=20% Similarity=0.228 Sum_probs=174.1
Q ss_pred chhhhHhhhcCCCCeEEcCCCcchhhhh-cccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCC
Q 009956 21 DDVSTICKSLGLKGSIDFGVGATNGSAD-KDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQA 99 (521)
Q Consensus 21 ~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~ 99 (521)
++...++.. ....|+++.+..|.... +.|+.++.+.|.+|++|+|++||+++|++| +++++|+++||||||+.+.+
T Consensus 19 ~~~~~~~~~--~~~~v~~p~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a-~~~~~~~~vrggGh~~~g~~ 95 (521)
T 2ipi_A 19 FDGGACGAR--TALVKVDRVDRRYQDLVTRGFNGRFRGRPDVVYVVHTADQVVDAVNQA-MAAGQRIAVRSGGHCFEGFV 95 (521)
T ss_dssp ------------CCCEEESSSTTHHHHHTCCSCTTCCCCCSEEEECSSHHHHHHHHHHH-HHHTCCEEEESSCCCTTCGG
T ss_pred ccccccccC--CCCeEECCCCcchHHHHhccccccccCCCCEEEEcCCHHHHHHHHHHH-HHcCCeEEEECCCcCCCCCc
Confidence 344445544 23466666656788777 888888899999999999999999999999 99999999999999999876
Q ss_pred CC-CCcEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHH-HhCCCcccccCCCCcccccccccccccCCCCcc
Q 009956 100 MA-DRGLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCV-EDFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFR 177 (521)
Q Consensus 100 ~~-~~gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~-~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~ 177 (521)
.+ .+|++|||++||+ |++|+ ++.+|+||||++|.+|++++. ++ |+..+. +.+..++|||.++++|+|..+.+
T Consensus 96 ~~~~~gvvIdl~~l~~--i~~d~--~~~~v~v~aG~~~~~l~~~l~~~~-Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~ 169 (521)
T 2ipi_A 96 DDPAVRAVIDMSQMRQ--VFYDS--GKRAFAVEPGATLGETYRALYLDW-GVTIPA-GVCPQVGVGGHVLGGGYGPLSRR 169 (521)
T ss_dssp GCTTCCEEEECTTCCC--EEEET--TTTEEEECTTSBHHHHHHHHHHHH-SBCCCC-CSCTTCBHHHHTTTTCCCTTHHH
T ss_pred ccCCCeEEEecccCCC--eEEeC--CCCEEEEeCCcCHHHHHHHHHHhc-CceeCC-CCCCCcccCCcccCCCCCccccc
Confidence 54 4799999999997 59998 778999999999999999997 78 996443 34457899999999999999999
Q ss_pred cCccccceeeeEEEecC--CcEEEe--cCC-CCcc--hhhhhhcc-CccceEEEEeEEee-----------EecCCc-eE
Q 009956 178 YGPQISNVAQLDVVTGN--GDMVTC--SES-RQPE--LFFNVLGG-LGQFGIITRARVLL-----------QSAPDK-VR 237 (521)
Q Consensus 178 ~G~~~d~v~~~~~v~~~--G~i~~~--~~~-~~~d--l~~~~~gs-~G~lGiit~~~l~l-----------~p~p~~-~~ 237 (521)
||.++|+|++++||++| |+++.+ ++. +++| |||+++|+ +|+|||||+++||+ +|.|+. ..
T Consensus 170 ~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~ 249 (521)
T 2ipi_A 170 DGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTL 249 (521)
T ss_dssp HCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEE
T ss_pred cccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEE
Confidence 99999999999999977 997443 543 4554 99999985 69999999999999 998763 34
Q ss_pred EEEEEeC
Q 009956 238 WIRLVYA 244 (521)
Q Consensus 238 ~~~~~~~ 244 (521)
...+.|+
T Consensus 250 ~~~~~~~ 256 (521)
T 2ipi_A 250 RHIVTWD 256 (521)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 4445553
No 18
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=1e-37 Score=333.04 Aligned_cols=205 Identities=16% Similarity=0.218 Sum_probs=176.5
Q ss_pred CCeEEcCCCcchhhhh-cccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCCC-CCcEEEEcC
Q 009956 33 KGSIDFGVGATNGSAD-KDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAMA-DRGLVIDMG 110 (521)
Q Consensus 33 ~~~v~~~~~~~~~~~~-~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~~-~~gvvidl~ 110 (521)
.+.|++..+..|.... +.|+.++...|.+|++|+|++||+++|++| +++++||++||+|||+.+.+.+ .+|++|||+
T Consensus 31 ~~~v~~p~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a-~~~~~~~~v~ggGh~~~g~~~~~~~gvvIdl~ 109 (523)
T 2wdx_A 31 GPVKVTPDDPRYLNLKLRGANSRFNGEPDYIHLVGSTQQVADAVEET-VRTGKRVAVRSGGHCFEDFVDNPDVKVIIDMS 109 (523)
T ss_dssp CCEEECTTSTTHHHHHTCSSCTTCCCCCSEEEECSSHHHHHHHHHHH-HHHTCCEEEESSCCCSSSSSSSTTCCEEEECT
T ss_pred CCeEECCCCcchHHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHH-HHcCCcEEEEcCCCCCCCCccCCCCeEEEEcc
Confidence 3567776656787777 888878899999999999999999999999 9999999999999999987765 479999999
Q ss_pred CCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHH-hCCCcccccCCCCcccccccccccccCCCCcccCccccceeeeE
Q 009956 111 STGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVE-DFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISNVAQLD 189 (521)
Q Consensus 111 ~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~-~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~ 189 (521)
+||+ |++|+ +..+|+||||++|.+|++++.+ + |+..+. +.+..++|||.++++|+|..+.+||.++|+|++++
T Consensus 110 ~m~~--i~~d~--~~~~v~v~aG~~~~~l~~~l~~~~-Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~e 183 (523)
T 2wdx_A 110 LLTE--IAYDP--SMNAFLIEPGNTLSEVYEKLYLGW-NVTIPG-GVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVE 183 (523)
T ss_dssp TCCC--EEEET--TTTEEEECTTCBHHHHHHHHHHHH-SCCCCC-CCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEE
T ss_pred cCCC--EEEcC--CCCEEEEcCCCCHHHHHHHHHHhc-CeEEcc-CCCCCCeeCccccCCCCCcccccccChhheEEEEE
Confidence 9997 59999 7889999999999999999984 8 996444 55567899999999999999999999999999999
Q ss_pred EEecC--CcEEEe--cCC-CCcc--hhhhhhc-cCccceEEEEeEEee-----------EecCCc-eEEEEEEeC
Q 009956 190 VVTGN--GDMVTC--SES-RQPE--LFFNVLG-GLGQFGIITRARVLL-----------QSAPDK-VRWIRLVYA 244 (521)
Q Consensus 190 ~v~~~--G~i~~~--~~~-~~~d--l~~~~~g-s~G~lGiit~~~l~l-----------~p~p~~-~~~~~~~~~ 244 (521)
||++| |+++++ ++. +++| |||+++| ++|+|||||+++||+ +|.|+. .....+.|+
T Consensus 184 vV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (523)
T 2wdx_A 184 VVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFD 258 (523)
T ss_dssp EEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECC
T ss_pred EEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEec
Confidence 99955 997554 553 5555 9999997 469999999999999 998863 455566675
No 19
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=9.1e-39 Score=333.90 Aligned_cols=212 Identities=18% Similarity=0.309 Sum_probs=184.8
Q ss_pred chhhh-hcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCCC-CCcEEEEcCCCCCeeEEEe
Q 009956 43 TNGSA-DKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAMA-DRGLVIDMGSTGDSHFEIV 120 (521)
Q Consensus 43 ~~~~~-~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~~-~~gvvidl~~l~~~~i~id 120 (521)
.++.+ .++|++.+...|.+|++|+|++||+++|++| +|++++|+|||+.+.+.+ .+|++|||++||+ ++++|
T Consensus 4 ~~~~~~~~~w~~~~~~~p~~v~~P~s~~ev~~~v~~a-----~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~-i~~~d 77 (422)
T 2vfr_A 4 FMSDITVTNWAGNITYTAKELLRPHSLDALRALVADS-----ARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPS-VVDVD 77 (422)
T ss_dssp CCCCCCCBCSSSSCBCSCSSCBCCSSHHHHHHHHHHC-----SSEEECSSCCCCSSTTCCCTTCEEECSTTSCC-CEEEE
T ss_pred ccCCceeecCCCCccCCCCEEEeCCCHHHHHHHHHhC-----CCEEEEECCCCCCCCccCCCCcEEEEhhhCCC-cEEEc
Confidence 34443 4689888999999999999999999999986 799999999999988873 4899999999998 88999
Q ss_pred ccCCceEEEEeCCccHHHHHHHHHHhCCCcccccCCCCcccccccccccccCCCCcccCccccceeeeEEEecCCcEEEe
Q 009956 121 KVKGSTYLDVSGGALWEDVLKRCVEDFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISNVAQLDVVTGNGDMVTC 200 (521)
Q Consensus 121 ~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~~v~~~G~i~~~ 200 (521)
+ ++.+|+||||+++.+|.+++.++ |+.++.+++.+.+||||++++|++|.. .+||.++|+|+++++|++||+++++
T Consensus 78 ~--~~~~v~v~aG~~l~~l~~~l~~~-Gl~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~ 153 (422)
T 2vfr_A 78 T--AARTVRVGGGVRYAELARVVHAR-GLALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVI 153 (422)
T ss_dssp T--TTTEEEEETTCBHHHHHHHHHHT-TEECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEE
T ss_pred C--CCCEEEEcCCCCHHHHHHHHHHc-CCcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEe
Confidence 9 78999999999999999999999 998777788888999999999988865 6999999999999999999999999
Q ss_pred cCCCCcchhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHH-HHHHHHHhccCCCccccccc
Q 009956 201 SESRQPELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFT-RDAELLVSLKEERESFDYVE 270 (521)
Q Consensus 201 ~~~~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~p~~~~~~d 270 (521)
++.+++ |++++|++|++||||+++||+.|.|+......+ +.+++++. +.+..+.. .+..+++++
T Consensus 154 ~~~~~~--f~~~~g~~G~lGvit~~~l~l~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~e~~~ 218 (422)
T 2vfr_A 154 ARGDER--FGGAVTSLGALGVVTSLTLDLEPAYEMEQHVFT-ELPLAGLDPATFETVMA---AAYSVSLFT 218 (422)
T ss_dssp ETTSTT--GGGTSSCTTTTCEEEEEEEECEECCEEEEEEEE-EECSTTCCHHHHHHHHT---SSSEEEEEE
T ss_pred CCCCCC--cceEEecCCCCEEEEEEEEEEEecCceEEEEEe-cCCHHHHHHHHHHHHHh---cCCcEEEEe
Confidence 987776 899999999999999999999999987655543 77888887 77776652 344666654
No 20
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=8e-37 Score=322.10 Aligned_cols=207 Identities=23% Similarity=0.289 Sum_probs=185.8
Q ss_pred chhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcC--CCeEEEEcCCCCCCCCCCCCCcEEEEcCCCCCeeEEEe
Q 009956 43 TNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQS--NLTVAARGNGHSINGQAMADRGLVIDMGSTGDSHFEIV 120 (521)
Q Consensus 43 ~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~--~~~v~~~G~G~~~~g~~~~~~gvvidl~~l~~~~i~id 120 (521)
+...+.++|++ +.+.|.+|++|+|++||+++|++| +++ ++|++++|+|||+.+.+.+.+|++|||++||+ ++++|
T Consensus 28 ~~~~~~~~W~~-~~~~p~~vv~P~s~eev~~~v~~a-~~~~~~~~v~~~G~G~s~~~~~~~~~gvvIdl~~l~~-i~~~d 104 (481)
T 4feh_A 28 TTATRLTGWGR-TAPSVANVLRTPDAEMIVKAVARV-AESGGGRGAIARGLGRSYGDNAQNGGGLVIDMTPLNT-IHSID 104 (481)
T ss_dssp EEEEEECCTTC-CSCEEEEEEECSCHHHHHHHHHHH-HTTTCTTCEEEECSSCSSSSTTCCTTSEEEECTTCCC-EEEEE
T ss_pred CccceeecccC-CCCCCCEEEeCCCHHHHHHHHHHH-HHcCCCceEEEEeCCcCCCCCCCCcCeEEEECccCCC-ceEEc
Confidence 45567788976 799999999999999999999999 998 79999999999998877656899999999998 78999
Q ss_pred ccCCceEEEEeCCccHHHHHHHHHHhCCCcccccCCCCcccccccccccccCCCCcccCccccceeeeEEEecCCcEEEe
Q 009956 121 KVKGSTYLDVSGGALWEDVLKRCVEDFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISNVAQLDVVTGNGDMVTC 200 (521)
Q Consensus 121 ~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~~v~~~G~i~~~ 200 (521)
+ ++.+|+||||+++.+|.+++.++ |++++..++...+||||+++++++|..+.+||.++|+|+++++|++||+++++
T Consensus 105 ~--~~~~v~v~aGv~l~~L~~~l~~~-Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~ 181 (481)
T 4feh_A 105 A--DTKLVDIDAGVNLDQLMKAALPF-GLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHL 181 (481)
T ss_dssp T--TTTEEEEETTCBHHHHHHHHGGG-TEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEE
T ss_pred C--CCCEEEEcCCccHHHHHHHHHHc-CCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEe
Confidence 9 88999999999999999999999 99876666777889999999998888889999999999999999999999999
Q ss_pred cCC-CCcchhhhhhccCccceEEEEeEEeeEecCCce-EEEEEEeCCHHHHHHHHHH
Q 009956 201 SES-RQPELFFNVLGGLGQFGIITRARVLLQSAPDKV-RWIRLVYAEFDEFTRDAEL 255 (521)
Q Consensus 201 ~~~-~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~~~-~~~~~~~~~~~~~~~~~~~ 255 (521)
++. +++|||++++||.|++||||+++||+.|.|+.. ....+.+.+++++.+..++
T Consensus 182 s~~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~~ 238 (481)
T 4feh_A 182 TPTGEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHSD 238 (481)
T ss_dssp CSSSTTHHHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHSS
T ss_pred CCCCCChHHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHHH
Confidence 998 899999999999999999999999999998643 3345677888887776653
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=100.00 E-value=4.7e-31 Score=277.91 Aligned_cols=199 Identities=19% Similarity=0.181 Sum_probs=164.2
Q ss_pred chhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCC-----CCCCCCCcEEEEcC-CCCCee
Q 009956 43 TNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSIN-----GQAMADRGLVIDMG-STGDSH 116 (521)
Q Consensus 43 ~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~-----g~~~~~~gvvidl~-~l~~~~ 116 (521)
.+....++|++.+++.|.+|++|+|++||+++|++| +++++||+++|+|||+. ++....+|++|||+ +||+ +
T Consensus 14 ~y~~~~~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A-~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~-I 91 (540)
T 3js8_A 14 LYKQSFKNWAGDIKVDDVWTCAPRSADEVVKVANWA-KDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTA-M 91 (540)
T ss_dssp CEEEEEECTTSCCEEEEEEEECCSSHHHHHHHHHHH-HHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCC-E
T ss_pred hhcceeeccccccCCCccEEEEcCCHHHHHHHHHHH-HHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCC-E
Confidence 445566789988999999999999999999999999 99999999999999985 33333478999996 6997 5
Q ss_pred EEEeccCC--ceEEEEeCCccHHHHHHHHHHhCCCcccccCCCCcccccccccccccCCC----------CcccCccccc
Q 009956 117 FEIVKVKG--STYLDVSGGALWEDVLKRCVEDFGLAPRSWTDYLRLTVGGTLSNAGVSGQ----------AFRYGPQISN 184 (521)
Q Consensus 117 i~id~~~~--~~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~----------~~~~G~~~d~ 184 (521)
++|+ + ..+|+||||+++.+|.+++.++ |+..+..++.+.+||||++++|++|.. +.+||.++|+
T Consensus 92 -~vD~--~~~~~tVtV~AGv~l~~L~~~L~~~-GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~ 167 (540)
T 3js8_A 92 -SIDA--SGPVAKVTAQAGITMEALLTGLEKA-GLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNL 167 (540)
T ss_dssp -EEEC--SSSSEEEEEETTSBHHHHHHHHHHT-TEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGG
T ss_pred -EECC--CCCccEEEEccCCCHHHHHHHHHHc-CCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHh
Confidence 9997 4 5899999999999999999999 997555555566899999998876764 5799999999
Q ss_pred eeeeEEEecCCc-----EEEecCCCCcchhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHHH
Q 009956 185 VAQLDVVTGNGD-----MVTCSESRQPELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTR 251 (521)
Q Consensus 185 v~~~~~v~~~G~-----i~~~~~~~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~ 251 (521)
|+++++|++||+ ++++++ +++||+++ ++|.|+ ||||+++||+.|.+....... ..-+++++.+
T Consensus 168 V~~levV~adG~~~~~~i~~~s~-~~~DL~a~-r~G~G~-gIVTevtlrl~P~~~l~~~~~-~~~~~~e~l~ 235 (540)
T 3js8_A 168 VLSLTAVVYDKASGAYALRKFAR-NDPQIAPL-LAHVGR-SLIVEATLQAAPNQRLRCQSW-FNIPYGEMFA 235 (540)
T ss_dssp EEEEEEEEEETTTTEEEEEEEET-TSGGGHHH-HTCTTS-SCEEEEEEEEEECCEEEEEEE-CCSCHHHHTC
T ss_pred EEEEEEEcCCCCCceeeEEEeCC-CChhHHHH-HhcCCC-eEEEEEEEEEEECCceEEEEE-ecCCHHHHHh
Confidence 999999999998 888886 68998555 455577 699999999999987543211 1136666553
No 22
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=100.00 E-value=1.6e-30 Score=279.76 Aligned_cols=211 Identities=15% Similarity=0.122 Sum_probs=173.9
Q ss_pred CCeEEcC-CCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCC-----CCCcEE
Q 009956 33 KGSIDFG-VGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAM-----ADRGLV 106 (521)
Q Consensus 33 ~~~v~~~-~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~-----~~~gvv 106 (521)
.+.+.++ .+..+..+.++|++.+...|.+|++|+|++||+++|++| +++++|++++|+|||+.+.+. +.+|++
T Consensus 9 ~~~~~~p~~~~~y~~~~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a-~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvv 87 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAYQNWSKEIMLDATWVCSPKTPQDVVRLANWA-HEHDYKIRPRGAMAGWTPLTVEKGANVEKVIL 87 (561)
T ss_dssp CCCTTCCTTSCCEEEEEECTTSSSEEEEEEEECCSSHHHHHHHHHHH-HHHTCEEEEECCCCCCCTTSSCTTCCCTTEEE
T ss_pred CCceecCCCCHhHHHHHhhhhhccCCCCCEEEecCCHHHHHHHHHHH-HHCCCcEEEECCCCCcccccccCCCcCCCeEE
Confidence 3445544 335677788899888999999999999999999999999 999999999999999865332 236799
Q ss_pred EEc-CCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCcccccCCCCcccccccccccccCCC----------C
Q 009956 107 IDM-GSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLAPRSWTDYLRLTVGGTLSNAGVSGQ----------A 175 (521)
Q Consensus 107 idl-~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~----------~ 175 (521)
||| ++||+ | ++|+..+..+|+||||+++.+|.+++.++ |+.++..++.+.+||||++++|++|.. +
T Consensus 88 Idl~~~l~~-i-~vd~~~~~~~v~v~aGv~l~~L~~~l~~~-Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~ 164 (561)
T 2i0k_A 88 ADTMTHLNG-I-TVNTGGPVATVTAGAGASIEAIVTELQKH-DLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPG 164 (561)
T ss_dssp EECTTTSCC-E-EEECCSSSCEEEEETTSBHHHHHHHHHHT-TEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTT
T ss_pred EechhhCCc-e-EecCcCCccEEEEcCCCCHHHHHHHHHHc-CCcccccCCCCCcccCCCcccCCcccccccCCcccccc
Confidence 999 88997 5 99862134799999999999999999999 997666677777999999998887765 7
Q ss_pred cccCccccceeeeEEEecCCc---EEEecCCCCcchhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHHH
Q 009956 176 FRYGPQISNVAQLDVVTGNGD---MVTCSESRQPELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTR 251 (521)
Q Consensus 176 ~~~G~~~d~v~~~~~v~~~G~---i~~~~~~~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~ 251 (521)
.+||.++|+|+++++|++||+ ++++++. ++|++++++|. |. ||||+++||+.|.|+........++ ++++.+
T Consensus 165 ~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~-~~dl~~a~~g~-G~-giIt~~tl~l~p~~~~~~~~~~~~~-~~~~l~ 239 (561)
T 2i0k_A 165 HTYGSLSNLVTELTAVVWNGTTYALETYQRN-DPRITPLLTNL-GR-CFLTSVTMQAGPNFRQRCQSYTDIP-WRELFA 239 (561)
T ss_dssp CCSSCGGGGEEEEEEEEECSSSEEEEEEETT-SGGGHHHHSCT-TS-SCEEEEEEECEECCEEEEEEECCSC-HHHHTC
T ss_pred cccccHhheEEEEEEEeCCCCEEEeeeccCC-CccHHHHHhcC-CC-EEEEEEEEEEEECCceEEEEEEccC-HHHHHH
Confidence 789999999999999999999 8888764 78999888844 55 8999999999999976554443343 555444
No 23
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.96 E-value=1.7e-31 Score=268.23 Aligned_cols=187 Identities=19% Similarity=0.161 Sum_probs=157.0
Q ss_pred chhhhHhhhcCCCCeEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCC
Q 009956 21 DDVSTICKSLGLKGSIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAM 100 (521)
Q Consensus 21 ~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~ 100 (521)
+.++ +|++....++|.+ + .++..|+++ .+++.|.+|++|+|++||+++|++| +++++|++++|+|||+.+.+.
T Consensus 17 ~~~~-~l~~~l~~~~v~~-~-~~l~~~~t~---~~~~~p~~vv~P~s~eev~~~l~~a-~~~~~pv~~~GgGtnl~~~~~ 89 (326)
T 1hsk_A 17 DIYQ-ALQQLIPNEKIKV-D-EPLKRYTYT---KTGGNADFYITPTKNEEVQAVVKYA-YQNEIPVTYLGNGSNIIIREG 89 (326)
T ss_dssp HHHH-HHHHHSCGGGEEE-E-EEGGGTCTT---SCCCEEEEEECCSSHHHHHHHHHHH-HHTTCCEEEESSCSSEEECTT
T ss_pred HHHH-HHHHhcCccceec-C-cchHHhccC---CcCCcceEEEEcCCHHHHHHHHHHH-HHcCCCEEEECCCCccccCCC
Confidence 4444 7777555668888 4 588889876 4788999999999999999999999 999999999999999887766
Q ss_pred CCCcEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCC----cccccCCCCcccccccccccccCCCCc
Q 009956 101 ADRGLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGL----APRSWTDYLRLTVGGTLSNAGVSGQAF 176 (521)
Q Consensus 101 ~~~gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~----~p~~~~~~~~~tvGG~~~~~g~g~~~~ 176 (521)
+.+|++|||++||+ + ++|+ .+++||||++|.+|.+++.++ |+ +.+.. .+||||++++|+.|
T Consensus 90 ~~~gvvI~l~~m~~-i-~id~----~~v~v~aGv~~~~l~~~l~~~-Gl~gLe~~~~~----PgtvGG~i~~nagg---- 154 (326)
T 1hsk_A 90 GIRGIVISLLSLDH-I-EVSD----DAIIAGSGAAIIDVSRVARDY-ALTGLEFACGI----PGSIGGAVYMNAGA---- 154 (326)
T ss_dssp CEEEEEEECTTCCC-E-EEET----TEEEEETTSBHHHHHHHHHHT-TEESCGGGTTC----CSBHHHHHHHTCEE----
T ss_pred CCCeEEEEeCCCCc-e-EEcC----CEEEEeCCCcHHHHHHHHHHC-CCccccccCCC----cchhhHHHhccccc----
Confidence 55799999999997 5 8875 589999999999999999999 98 43222 34999999966534
Q ss_pred ccC-ccccceeeeEEEecCCcEEEecCCCCcchhhhhhc----cCccceEEEEeEEeeEec-CCc
Q 009956 177 RYG-PQISNVAQLDVVTGNGDMVTCSESRQPELFFNVLG----GLGQFGIITRARVLLQSA-PDK 235 (521)
Q Consensus 177 ~~G-~~~d~v~~~~~v~~~G~i~~~~~~~~~dl~~~~~g----s~G~lGiit~~~l~l~p~-p~~ 235 (521)
|| .++|+|.++++|++||++++++.. ++++.++. ++| ||||+++||+.|. |+.
T Consensus 155 -yG~~~~d~v~~v~vv~~~G~i~~~~~~---~~~~gyr~~~l~s~g--gIIt~~~l~l~p~~p~~ 213 (326)
T 1hsk_A 155 -YGGEVKDCIDYALCVNEQGSLIKLTTK---ELELDYRNSIIQKEH--LVVLEAAFTLAPGKMTE 213 (326)
T ss_dssp -TTEEHHHHEEEEEEECTTSCEEEEETT---TTTCBTTBCHHHHTT--CEEEEEEEECEECCHHH
T ss_pred -CchhhhhhEEEEEEEeCCCCEEEEChH---HcCCCccccccCCCC--EEEEEEEEEEEcCCHHH
Confidence 88 999999999999999999999875 56666665 445 9999999999998 643
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.95 E-value=1.1e-28 Score=246.16 Aligned_cols=190 Identities=15% Similarity=0.119 Sum_probs=159.8
Q ss_pred hhHhhhcCCCCeEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCC
Q 009956 24 STICKSLGLKGSIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAMADR 103 (521)
Q Consensus 24 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~~~~ 103 (521)
-++|++.....+|.++. ++..|+++ .+++.|.++++|+|++||+++|++| +++++|++++|+|||+.+.+.+.+
T Consensus 25 ~~~L~~~lg~~~v~~~~--~l~~~tt~---~igg~p~~vv~P~s~eev~~~v~~a-~~~~~pv~v~GgGsnl~~~~~~~~ 98 (322)
T 3tx1_A 25 MNNLQTKFPHIAIKLNE--PLSKYTYT---KTGGAADVFVMPKTIEEAQEVVAYC-HQNKIPLTILGNGSNLIIKDGGIR 98 (322)
T ss_dssp CCCHHHHCTTSEEEEEE--EGGGGSTT---SCCCEEEEEEECSSHHHHHHHHHHH-HHTTCCEEEESCCTTEEECTTCEE
T ss_pred HHHHHHhcCCcceEcCc--chHHhccC---CcCceeeEEEEeCCHHHHHHHHHHH-HHcCCcEEEECCccCCCcCCCCCC
Confidence 33788766667888886 79999875 5889999999999999999999999 999999999999999887665557
Q ss_pred cEEEEcCCCCCeeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCcccccCCCCcccccccccccccCCCCccc-Cccc
Q 009956 104 GLVIDMGSTGDSHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRY-GPQI 182 (521)
Q Consensus 104 gvvidl~~l~~~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~-G~~~ 182 (521)
|++|||++||+ +++|. .+++|+||++|.+|.+++.++ |+.+..+....++||||++++|+.| | |.++
T Consensus 99 gvvI~l~~~~~--I~~d~----~~v~v~aG~~~~~l~~~l~~~-Gl~Gle~~~giPgTVGGav~~NaGg-----yGg~~~ 166 (322)
T 3tx1_A 99 GVILHLDLLQT--IERNN----TQIVAMSGAKLIDTAKFALNE-SLSGLEFACGIPGSIGGALHMNAGA-----YGGEIS 166 (322)
T ss_dssp EEEEECTTCCC--EEEET----TEEEEETTSBHHHHHHHHHHT-TEESCGGGTTCCSBHHHHHHHTCEE-----TTEEHH
T ss_pred eEEEECCCCCc--EEECC----CEEEEecCcCHHHHHHHHHHc-CCcccccCCCCcchhHHHHHhCccC-----cccchH
Confidence 99999999997 56765 589999999999999999999 9965555455568999999955433 5 7999
Q ss_pred cceeeeEEEecCCcEEEecCCCCcchhhhhhccC-c-cceEEEEeEEeeEecCC
Q 009956 183 SNVAQLDVVTGNGDMVTCSESRQPELFFNVLGGL-G-QFGIITRARVLLQSAPD 234 (521)
Q Consensus 183 d~v~~~~~v~~~G~i~~~~~~~~~dl~~~~~gs~-G-~lGiit~~~l~l~p~p~ 234 (521)
|+|+++++|+++|+++++++ .|++++++++. | ..||||+++|||.|.|+
T Consensus 167 d~v~~vevV~~~G~i~~~~~---~~~~~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 167 DVLEAATVLTQTGELKKLKR---SELKAAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp HHEEEEEEECTTSCEEEEEG---GGCC--CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred hhEEEEEEEcCCCCEEEech---HHcCcchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 99999999999999999975 48889999874 3 46899999999999874
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.93 E-value=3.3e-26 Score=230.42 Aligned_cols=181 Identities=15% Similarity=0.149 Sum_probs=155.8
Q ss_pred eEEcCCCcchhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCCcEEEEcCCCCC
Q 009956 35 SIDFGVGATNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAMADRGLVIDMGSTGD 114 (521)
Q Consensus 35 ~v~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~~~~gvvidl~~l~~ 114 (521)
++..+. ++..|++. .+++.|.++++|+|++||+++|++| +++++|++++|+|||+.+.+. .+|++|+++ |++
T Consensus 12 ~~~~~~--~L~~~tt~---~igg~a~~vv~p~s~eel~~~v~~a-~~~~ipv~vlGgGSNll~~d~-~~GvVI~l~-~~~ 83 (357)
T 3i99_A 12 QIQLGA--NLKPYHTF---GIEQLAAQLVVAESIDDLKALYCSA-EWASLPKLIIGKGSNMLFTCH-YTGMIVVNR-LNG 83 (357)
T ss_dssp CCEEEE--ESGGGSTT---CCSCEEEEEEEECSHHHHHHHHSSS-TTTTSCEEEESSCTTEEECSC-EEEEEEEEC-CCC
T ss_pred eeecCC--cchhhccC---CCCccceEEEEECCHHHHHHHHHHH-HHcCCCEEEECCCcCcccCCC-CCeEEEEcC-CCc
Confidence 344444 78888887 6899999999999999999999999 999999999999999887666 589999998 997
Q ss_pred eeEEEeccCCceEEEEeCCccHHHHHHHHHHhCCCcccccCCCCcccccccccccccCCCCcccCc-cccceeeeEEEec
Q 009956 115 SHFEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYGP-QISNVAQLDVVTG 193 (521)
Q Consensus 115 ~~i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~-~~d~v~~~~~v~~ 193 (521)
+++++..++.+++|+||++|.+|.+++.++ ||.+..+.+..++||||++++|+ ..||. ++|+|.++++|++
T Consensus 84 --i~v~~~~~~~~v~v~AG~~~~~l~~~a~~~-Gl~GlE~l~gIPGtVGGav~~Na-----GaYG~e~~d~v~~vevv~~ 155 (357)
T 3i99_A 84 --IEHQQDDDYHRLHVAGGEDWPSLVSWCVEQ-GIGGLENLALIPGCAGSAPIQNI-----GAYGVEFKDVCDYVEYLCL 155 (357)
T ss_dssp --EEEEECSSEEEEEEETTSBHHHHHHHHHHT-TCTTCGGGTTCCSBGGGTTTTTC-----EETTEEGGGTEEEEEEEET
T ss_pred --eEEeccCCceEEEEeCCCcHHHHHHHHHHc-CCcCccccCCCCchhHHHHHhch-----hhhhhhHHhhEeEEEEEEC
Confidence 577541146789999999999999999999 99877766666789999999554 26886 9999999999998
Q ss_pred -CCcEEEecCCCCcchhhhhhccC-----ccceEEEEeEEeeEecCC
Q 009956 194 -NGDMVTCSESRQPELFFNVLGGL-----GQFGIITRARVLLQSAPD 234 (521)
Q Consensus 194 -~G~i~~~~~~~~~dl~~~~~gs~-----G~lGiit~~~l~l~p~p~ 234 (521)
+|+++++++ .|++|++++|. |++||||+++|||.|.++
T Consensus 156 ~~G~i~~~~~---~dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 156 ETGTVKRLTM---EECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TTTEEEEEET---GGGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CCCcEEEEeH---HHcCcccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 999999975 48999999873 479999999999999864
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.93 E-value=5.8e-25 Score=220.86 Aligned_cols=174 Identities=16% Similarity=0.094 Sum_probs=149.9
Q ss_pred chhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCCcEEEEcCCCCCeeEEEecc
Q 009956 43 TNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAMADRGLVIDMGSTGDSHFEIVKV 122 (521)
Q Consensus 43 ~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~~~~gvvidl~~l~~~~i~id~~ 122 (521)
++..|++. .+++.|.++++|+|++||++++++| +++++|++++|+|||+.+.+. .+|++|+|+ |++ +..++.
T Consensus 2 ~L~~~tt~---~igg~a~~~v~p~s~eel~~~l~~a-~~~~~pv~vlGgGSnll~~d~-~~GvVI~l~-~~~-i~~i~~- 73 (340)
T 1uxy_A 2 SLKPWNTF---GIDHNAQHIVCAEDEQQLLNAWQYA-TAEGQPVLILGEGSNVLFLED-YRGTVIINR-IKG-IEIHDE- 73 (340)
T ss_dssp BCGGGSTT---CCCCBEEEEEEESSHHHHHHHHHHH-HHTTCCEEEESSCTTEEECSC-EEEEEEEEC-CCC-EEEEEC-
T ss_pred CccccccC---CCCccccEEEEeCCHHHHHHHHHHH-HHcCCCEEEECCCcCCcccCC-CCeEEEEcc-CCC-cEEEec-
Confidence 45667776 6889999999999999999999999 999999999999999887664 589999996 997 666776
Q ss_pred CCc-eEEEEeCCccHHHHHHHHHHhCCCcccccCCCCcccccccccccccCCCCcccC-ccccceeeeEEEec-CCcEEE
Q 009956 123 KGS-TYLDVSGGALWEDVLKRCVEDFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYG-PQISNVAQLDVVTG-NGDMVT 199 (521)
Q Consensus 123 ~~~-~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G-~~~d~v~~~~~v~~-~G~i~~ 199 (521)
++ .+++|+||++|.+|.+++.++ |+.+..+.+..++||||++..|. | .|| .++|+|.++++|++ +|++++
T Consensus 74 -~~~~~v~vgAG~~~~~l~~~~~~~-Gl~Gle~~~gIPGtVGGa~~~Na-G----ayG~ei~d~v~~v~vv~~~~G~v~~ 146 (340)
T 1uxy_A 74 -PDAWYLHVGAGENWHRLVKYTLQE-GMPGLENLALIPGCVGSSPIQNI-G----AYGVELQRVCAYVDSVELATGKQVR 146 (340)
T ss_dssp -SSEEEEEEETTSBHHHHHHHHHHT-TCCSCGGGTTCCSBGGGTTTTTC-E----ETTEEGGGTEEEEEEEETTTTEEEE
T ss_pred -CCCeEEEEecCCCHHHHHHHHHHC-CCCccccccCCccchhHHHHhcc-c----cchhhHHhheeEEEEEECCCCcEEE
Confidence 55 689999999999999999999 99766666666689999999543 1 377 59999999999997 999999
Q ss_pred ecCCCCcchhhhhhccC-----ccceEEEEeEEeeEecCC
Q 009956 200 CSESRQPELFFNVLGGL-----GQFGIITRARVLLQSAPD 234 (521)
Q Consensus 200 ~~~~~~~dl~~~~~gs~-----G~lGiit~~~l~l~p~p~ 234 (521)
++. .|+++++++|. +++||||+++|+|.|.|.
T Consensus 147 ~~~---~d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 147 LTA---KECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp EET---GGGTCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred EeH---HHhccccCcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 975 48999999873 369999999999999874
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.89 E-value=2e-23 Score=202.41 Aligned_cols=161 Identities=15% Similarity=0.113 Sum_probs=137.7
Q ss_pred chhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCC-cEEEEcCCCCCeeEEEec
Q 009956 43 TNGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQAMADR-GLVIDMGSTGDSHFEIVK 121 (521)
Q Consensus 43 ~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~~~~~~-gvvidl~~l~~~~i~id~ 121 (521)
+++.|++. .++++|. +++|+|++||+++| ++|++++|+|||+.+.+.+.+ |++|++++||+ +++|
T Consensus 10 ~l~~~tt~---~igg~a~-vv~p~s~edv~~~v-------~ipv~v~GgGsnll~~d~~~~~GvVI~l~~~~~--I~vd- 75 (268)
T 2gqt_A 10 LLKDYTTL---GVGGPAE-LWTVETREELKRAT-------EAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQT--YDLK- 75 (268)
T ss_dssp EGGGGSSS---CCCCEEE-EEEECSHHHHHHHT-------TSCEEECSSSSSEEECTTCCSSEEEEECGGGGC--BCTT-
T ss_pred ChHHhccc---ccCcceE-EEEeCCHHHHHHHh-------CCCeEEcCCCcCceecCCCcCCeEEEEcCCCCC--cEEc-
Confidence 67788774 5888999 99999999999987 689999999999998877655 99999999997 4542
Q ss_pred cCCceEEEEeCCccHHHHHHHHHHhCCCcccccCCCCcccccccccccccCCCCcccC-ccccceeeeEEEecCCcEEEe
Q 009956 122 VKGSTYLDVSGGALWEDVLKRCVEDFGLAPRSWTDYLRLTVGGTLSNAGVSGQAFRYG-PQISNVAQLDVVTGNGDMVTC 200 (521)
Q Consensus 122 ~~~~~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G-~~~d~v~~~~~v~~~G~i~~~ 200 (521)
+ +|+||++|.+|.+++.++ |+.+..+.+..++||||++++|+ | .|| .++|+|+++++| ++|+++++
T Consensus 76 ---~---~v~aG~~~~~l~~~~~~~-Gl~Gle~~~giPGtvGGav~~Na-G----ayG~e~~d~v~~v~vv-~~G~v~~~ 142 (268)
T 2gqt_A 76 ---G---WVGAGTLLPLLVQEAARA-GLSGLEGLLGIPAQVGGAVKMNA-G----TRFGEMADALEAVEVF-HDGAFHVY 142 (268)
T ss_dssp ---S---EEETTSBHHHHHHHHHHT-TEESCGGGTTCCCBHHHHHHTTC-E----ETTEEGGGGEEEEEEE-ETTEEEEE
T ss_pred ---C---EEECCCCHHHHHHHHHHc-CCcCCccccCccchhHHHHHhcc-c----cCchhHHhheeEEEEE-CCCcEEEE
Confidence 2 999999999999999999 99877777767789999999654 2 588 799999999999 99999999
Q ss_pred cCCCCcchhhhhhccCc-cceEEEEeEEeeEecC
Q 009956 201 SESRQPELFFNVLGGLG-QFGIITRARVLLQSAP 233 (521)
Q Consensus 201 ~~~~~~dl~~~~~gs~G-~lGiit~~~l~l~p~p 233 (521)
+. .|++++++++.- .-||||+++|||.|.+
T Consensus 143 ~~---~~l~~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 143 CP---EELGFGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp CG---GGSCCBTTBCCCSTTCEEEEEEECCEECC
T ss_pred ch---HHcccccCCCCcCCCceEEEEEEEEEeCC
Confidence 75 489999999851 1249999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.82 E-value=1.7e-20 Score=176.69 Aligned_cols=121 Identities=21% Similarity=0.212 Sum_probs=103.6
Q ss_pred EEEeccCCceEEEEeCCccHHHHHHHHHHhCCCcccccCC-CCcccccccccccccCCCCcccCccccceeeeEEEecCC
Q 009956 117 FEIVKVKGSTYLDVSGGALWEDVLKRCVEDFGLAPRSWTD-YLRLTVGGTLSNAGVSGQAFRYGPQISNVAQLDVVTGNG 195 (521)
Q Consensus 117 i~id~~~~~~~v~v~aG~~~~~l~~~~~~~~g~~p~~~~~-~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~~~~v~~~G 195 (521)
+++|+ ++.+|+||||+++.+|++++.++ |++.+..++ ... ||||++++|++| .+||.. |+|+++++|++||
T Consensus 1 l~vd~--~~~~v~V~aGv~l~~L~~~l~~~-Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG 72 (219)
T 2yvs_A 1 MEVHA--ADQYLVAPGEADLLEVHARLAGT-GLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKG 72 (219)
T ss_dssp CEEET--TTTEEEEETTCCHHHHHHHHTTT-TEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTS
T ss_pred CeEcC--CCCEEEEcCCCcHHHHHHHHHHc-CCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCC
Confidence 47888 78999999999999999999999 996444333 333 999999988766 899999 9999999999999
Q ss_pred cEEEecCC-----CCcchhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCC
Q 009956 196 DMVTCSES-----RQPELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAE 245 (521)
Q Consensus 196 ~i~~~~~~-----~~~dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~ 245 (521)
++++++.. .++|++++++|++|+|||||+++||+.|.|+......+.+.+
T Consensus 73 ~i~~~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~~~~~~ 127 (219)
T 2yvs_A 73 RRVRAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRRPFSGS 127 (219)
T ss_dssp CEEEEECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEEECCSS
T ss_pred CEEEECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEEEecCC
Confidence 99999864 348999999999999999999999999999876666555543
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.64 E-value=1.7e-07 Score=91.91 Aligned_cols=151 Identities=15% Similarity=0.176 Sum_probs=102.3
Q ss_pred CccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCC---CCCCCcEEEEcCC---CCCeeEEEeccCCceEEEEe
Q 009956 58 KPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQ---AMADRGLVIDMGS---TGDSHFEIVKVKGSTYLDVS 131 (521)
Q Consensus 58 ~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~---~~~~~gvvidl~~---l~~~~i~id~~~~~~~v~v~ 131 (521)
.+..+++|+|.+|+.++++.. . .+..+.||||++... .....+++||+++ |+. |+.++ ..++++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~-~---~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~--i~~~~----~~l~iG 73 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL-G---SDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRG--IREEG----STVVIG 73 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH-G---GGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCC--EEEET----TEEEEE
T ss_pred CcceEECCCCHHHHHHHHHhc-C---CCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcc--eEecC----CEEEEc
Confidence 345689999999999998754 3 568999999996532 1123689999985 675 66654 469999
Q ss_pred CCccHHHHHHH-HHHhCCCc-----ccccCCC---CcccccccccccccCCCCcccCcccccee-------eeEEEecCC
Q 009956 132 GGALWEDVLKR-CVEDFGLA-----PRSWTDY---LRLTVGGTLSNAGVSGQAFRYGPQISNVA-------QLDVVTGNG 195 (521)
Q Consensus 132 aG~~~~~l~~~-~~~~~g~~-----p~~~~~~---~~~tvGG~~~~~g~g~~~~~~G~~~d~v~-------~~~~v~~~G 195 (521)
||+++.+|.+. +.++ ++- .....+. +.+||||++.++. + ..|.+. .+++..++|
T Consensus 74 A~~tl~~l~~~~~~~~-~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~-~--------~~D~~~~l~Al~A~v~~~~~~G 143 (287)
T 1ffv_C 74 AMTVENDLISSPIVQA-RLPLLAEAAKLIADPQVRNRGTIGGDIAHGD-P--------GNDHPALSIAVEAHFVLEGPNG 143 (287)
T ss_dssp TTCBHHHHHHCHHHHH-HCHHHHHHGGGSSCTTGGGTCBHHHHHHTCC-T--------TCSHHHHHHHTTCEEEEEETTE
T ss_pred cCCcHHHHhhChHHHH-HhHHHHHHHHHhCCHHHhcceechhhhccCC-C--------cHHHHHHHHHcCcEEEEEcCCc
Confidence 99999999863 4444 331 1112221 2579999999774 2 345544 588888999
Q ss_pred cEEEecCCCCcchhhhhhccC-ccceEEEEeEEeeEec
Q 009956 196 DMVTCSESRQPELFFNVLGGL-GQFGIITRARVLLQSA 232 (521)
Q Consensus 196 ~i~~~~~~~~~dl~~~~~gs~-G~lGiit~~~l~l~p~ 232 (521)
..+.... |.+..++-+. ..-.|||+++|.+.+.
T Consensus 144 -~r~i~~~---df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 144 -RRTVPAD---GFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp -EEEEEST---TTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred -eEEEEHH---HHhcCcccccCCCCCEEEEEEecCCCC
Confidence 4555443 6666655321 2235999999987653
No 30
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.96 E-value=1e-05 Score=84.16 Aligned_cols=152 Identities=12% Similarity=0.050 Sum_probs=97.2
Q ss_pred CCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCC--C-CCCCcEEEEcCC---CCCeeEEEeccCCceEEEE
Q 009956 57 YKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQ--A-MADRGLVIDMGS---TGDSHFEIVKVKGSTYLDV 130 (521)
Q Consensus 57 ~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~--~-~~~~gvvidl~~---l~~~~i~id~~~~~~~v~v 130 (521)
+.....++|.|.+|+.++++.. . +..+.||||++... . ....+++||+++ |+. |+.++ ..+++
T Consensus 175 G~a~~y~~P~sl~ea~~ll~~~-~----~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~--I~~~~----~~l~I 243 (462)
T 2w3s_A 175 GQTAPAFLPETSDALADWYLAH-P----EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQ--IRETP----DGYGI 243 (462)
T ss_dssp ----CCBCCSSHHHHHHHHHHC-T----TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSC--EEEET----TEEEE
T ss_pred CCccEEEecCCHHHHHHHHhhC-C----CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCc--EEEcC----CEEEE
Confidence 4445678999999999988743 2 46889999998743 1 223689999988 665 66654 45999
Q ss_pred eCCccHHHHHHHHHHhCCC--------cccccCCCCcccccccccccccCCCCcccCcccccee----eeEEEecCCcEE
Q 009956 131 SGGALWEDVLKRCVEDFGL--------APRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISNVA----QLDVVTGNGDMV 198 (521)
Q Consensus 131 ~aG~~~~~l~~~~~~~~g~--------~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~----~~~~v~~~G~i~ 198 (521)
+||+++.+|.+. .++ .+ ...+++--+.+||||+|.++.. .+.+...++ .+++..++|+ .
T Consensus 244 GA~vtl~~l~~~-l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~-R 314 (462)
T 2w3s_A 244 GAGVTIAALRAF-AEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQER-R 314 (462)
T ss_dssp ETTCBHHHHHHH-HTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBC-C
T ss_pred ccCCcHHHHHHH-HHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCce-E
Confidence 999999999877 333 33 0111111123799999998652 245555566 6777778873 2
Q ss_pred EecCCCCcchhhhhhcc-CccceEEEEeEEeeEe
Q 009956 199 TCSESRQPELFFNVLGG-LGQFGIITRARVLLQS 231 (521)
Q Consensus 199 ~~~~~~~~dl~~~~~gs-~G~lGiit~~~l~l~p 231 (521)
+... .|.|..++-+ ...--|||++.|...+
T Consensus 315 ~vp~---~dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 315 RMPL---EDFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp CCBG---GGGEEETTEESCCTTCEEEEEEEESCC
T ss_pred EEEH---HHhhcccccccCCCCcEEEEEEEecCC
Confidence 2322 2555544332 1122499999997654
No 31
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.80 E-value=3.1e-05 Score=75.73 Aligned_cols=151 Identities=12% Similarity=0.109 Sum_probs=94.4
Q ss_pred CccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCC---CCCCCcEEEEcCC---CCCeeEEEeccCCceEEEEe
Q 009956 58 KPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQ---AMADRGLVIDMGS---TGDSHFEIVKVKGSTYLDVS 131 (521)
Q Consensus 58 ~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~---~~~~~gvvidl~~---l~~~~i~id~~~~~~~v~v~ 131 (521)
.+..+++|.|.+|+.++++.. +-+..+.||||++... .....+++||+++ |+. |+.++ ..++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~--I~~~~----~~l~IG 73 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL----GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVG--IREEG----TDVVIG 73 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSC--EEEET----TEEEEE
T ss_pred CceEEECcCCHHHHHHHHHhc----CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcc--eEecC----CEEEEc
Confidence 345689999999999988643 2347889999996431 1223689999987 564 56654 469999
Q ss_pred CCccHHHHHH--HHHHhC-CC-----cccccCCCCcccccccccccccCCCCcccCcccccee-------eeEEEecCCc
Q 009956 132 GGALWEDVLK--RCVEDF-GL-----APRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISNVA-------QLDVVTGNGD 196 (521)
Q Consensus 132 aG~~~~~l~~--~~~~~~-g~-----~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~-------~~~~v~~~G~ 196 (521)
|++++.+|.+ .+.++. ++ ...++.--+.+||||++.++. ..+|.+. .+++..++|+
T Consensus 74 A~~t~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~ 144 (288)
T 1n62_C 74 AMTTQHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA 144 (288)
T ss_dssp TTCBHHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE
T ss_pred cCCcHHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc
Confidence 9999999985 333320 11 011111112469999999873 2456555 6667778884
Q ss_pred EEEecCCCCcchhhhhhc-cCccceEEEEeEEeeEe
Q 009956 197 MVTCSESRQPELFFNVLG-GLGQFGIITRARVLLQS 231 (521)
Q Consensus 197 i~~~~~~~~~dl~~~~~g-s~G~lGiit~~~l~l~p 231 (521)
.+.... |.|....- ....--|||++.|...+
T Consensus 145 -r~v~~~---df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 145 -RIVAAR---DYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp -EEEEHH---HHEEETTEESCCTTCEEEEEEEECCC
T ss_pred -EEEEHH---HHhcCcccccCCCCCEEEEEEeCCCC
Confidence 344321 44433321 11223599999997654
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=97.36 E-value=0.00029 Score=69.40 Aligned_cols=158 Identities=12% Similarity=0.036 Sum_probs=92.6
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCC---CCCCCcEEEEcCCCCC-eeEEEeccCCceEEEE
Q 009956 55 YSYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQ---AMADRGLVIDMGSTGD-SHFEIVKVKGSTYLDV 130 (521)
Q Consensus 55 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~---~~~~~gvvidl~~l~~-~~i~id~~~~~~~v~v 130 (521)
+++.+...++|.|.+|+.++++.. .+ ..+.+|||++... .......+||++++.. ..|+.++ ..+++
T Consensus 6 ~~g~~~~y~~P~sl~ea~~ll~~~---~~--a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~----~~l~I 76 (305)
T 3nvz_B 6 FEGERVTWIQASTLKELLDLKAQH---PE--AKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGP----EGISF 76 (305)
T ss_dssp EECSSCEEEECCSHHHHHHHHHHC---TT--CEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECS----SEEEE
T ss_pred ecCCCeEEEccCCHHHHHHHHHhC---CC--CEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECC----CeEEE
Confidence 456778999999999999887532 22 4788999997522 1223578999997431 0255543 57999
Q ss_pred eCCccHHHHHHHHHHh------------CCC-----cccccCCCCcccccccccccccCCCCcccCcccccee----eeE
Q 009956 131 SGGALWEDVLKRCVED------------FGL-----APRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISNVA----QLD 189 (521)
Q Consensus 131 ~aG~~~~~l~~~~~~~------------~g~-----~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~----~~~ 189 (521)
+|++++.+|.+.+.++ ..+ ...++.--+.+||||+++++.. .+.+.--++ .++
T Consensus 77 GA~vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~AldA~v~ 150 (305)
T 3nvz_B 77 GAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKLT 150 (305)
T ss_dssp ETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHTCEEE
T ss_pred ccCCcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcCCEEE
Confidence 9999999998765421 001 0111111126799999998641 122221222 466
Q ss_pred EEecCCcEEEecCCCCcchhhhhhcc-CccceEEEEeEEeeE
Q 009956 190 VVTGNGDMVTCSESRQPELFFNVLGG-LGQFGIITRARVLLQ 230 (521)
Q Consensus 190 ~v~~~G~i~~~~~~~~~dl~~~~~gs-~G~lGiit~~~l~l~ 230 (521)
+..++|+ .+..-. .|.|....-. ...--|||++.|...
T Consensus 151 l~~~~G~-R~vp~~--~df~~g~~~t~l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 151 IVSRGTR-RTVPMD--HTFFPSYRKTLLGPEEILLSIEIPYS 189 (305)
T ss_dssp EEETTEE-EEEECC--GGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred EEcCCCc-EEEEee--hHhhcCcccccCCCCcEEEEEEecCC
Confidence 6777884 333321 0333322211 111239999988543
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=97.10 E-value=0.00048 Score=67.19 Aligned_cols=149 Identities=12% Similarity=0.091 Sum_probs=90.6
Q ss_pred CccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCC---CCCCCcEEEEcCCC---CCeeEEEeccCCceEEEEe
Q 009956 58 KPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQ---AMADRGLVIDMGST---GDSHFEIVKVKGSTYLDVS 131 (521)
Q Consensus 58 ~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~---~~~~~gvvidl~~l---~~~~i~id~~~~~~~v~v~ 131 (521)
.+..+++|.|.+|+.++++ +. -...+.+|||++... .......+||++++ +. |+.++ ..++++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~---~~--~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~--I~~~~----~~l~IG 72 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLA---DD--PDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFE--ISQSA----GILSVG 72 (288)
T ss_dssp CCCEEECCSSHHHHHHHHH---HC--TTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGC--EEEET----TEEEEE
T ss_pred CCceEECCCCHHHHHHHHh---hC--CCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcC--eEEcC----CEEEEc
Confidence 3456899999999988876 21 125778999995421 12235799999984 53 56554 569999
Q ss_pred CCccHHHHHH--HHHHhCCC------cccccCCCCcccccccccccccCCCCcccCcccccee-------eeEEEecCCc
Q 009956 132 GGALWEDVLK--RCVEDFGL------APRSWTDYLRLTVGGTLSNAGVSGQAFRYGPQISNVA-------QLDVVTGNGD 196 (521)
Q Consensus 132 aG~~~~~l~~--~~~~~~g~------~p~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~-------~~~~v~~~G~ 196 (521)
|++|+.+|.+ .+.++... ...++.--+.+|+||+|+++. ...|... .+++..++|+
T Consensus 73 A~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~ 143 (288)
T 1t3q_C 73 AMVTHFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGV 143 (288)
T ss_dssp TTCBHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEE
T ss_pred CCCcHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCce
Confidence 9999999986 23222111 111122223569999999762 2456555 6777777874
Q ss_pred EEEecCCCCcchhhhhhc-cCccceEEEEeEEeeE
Q 009956 197 MVTCSESRQPELFFNVLG-GLGQFGIITRARVLLQ 230 (521)
Q Consensus 197 i~~~~~~~~~dl~~~~~g-s~G~lGiit~~~l~l~ 230 (521)
.+..-. |.|....- ....--|||++.|...
T Consensus 144 -R~vp~~---dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 144 -RSVSAT---DFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp -EEEEHH---HHEEETTEESCCTTCEEEEEEEECC
T ss_pred -EEEEHH---HHhcCcccccCCCCCEEEEEEecCC
Confidence 333221 33332211 1122348999998653
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=96.29 E-value=0.0025 Score=62.33 Aligned_cols=105 Identities=12% Similarity=0.143 Sum_probs=65.7
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCC---CCCCCcEEEEcCCCCC-eeEEEeccCCceEEEEeCCc
Q 009956 59 PLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQ---AMADRGLVIDMGSTGD-SHFEIVKVKGSTYLDVSGGA 134 (521)
Q Consensus 59 p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~---~~~~~gvvidl~~l~~-~~i~id~~~~~~~v~v~aG~ 134 (521)
+...++|.|.+|+.++++.. .+ ....+.+|||++... .......+||++++.. ..|+.+ +..++++|++
T Consensus 3 ~f~y~~P~sl~ea~~ll~~~-~~--~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~----~~~l~IGA~v 75 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQY-KD--VPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVE----ENTIHIGALS 75 (296)
T ss_dssp CCEEECCSSHHHHHHHHHHT-TT--SCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEC----SSEEEEETTC
T ss_pred ceeEeCCCCHHHHHHHHHhC-CC--CCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEc----CCeEEEccCC
Confidence 45689999999998877533 21 135788999996521 1123689999998532 025554 3679999999
Q ss_pred cHHHHHHHHH--HhCC-C-----cccccCCCCcccccccccccc
Q 009956 135 LWEDVLKRCV--EDFG-L-----APRSWTDYLRLTVGGTLSNAG 170 (521)
Q Consensus 135 ~~~~l~~~~~--~~~g-~-----~p~~~~~~~~~tvGG~~~~~g 170 (521)
|+.+|.+.-. ++.. + ...++.--+.+||||+|+++.
T Consensus 76 t~~~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~ 119 (296)
T 3hrd_C 76 TFTQIENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLSTSS 119 (296)
T ss_dssp BHHHHHHCHHHHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHTC
T ss_pred cHHHHHhChhhhhHhHHHHHHHHHhCCHHHhcceehhhhhccCC
Confidence 9999874321 1100 0 011111123579999999753
No 35
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=93.08 E-value=0.14 Score=59.93 Aligned_cols=106 Identities=11% Similarity=-0.001 Sum_probs=67.5
Q ss_pred CCCccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCC---CCCCCcEEEEcCCCCC-eeEEEeccCCceEEEEe
Q 009956 56 SYKPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQ---AMADRGLVIDMGSTGD-SHFEIVKVKGSTYLDVS 131 (521)
Q Consensus 56 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~---~~~~~gvvidl~~l~~-~~i~id~~~~~~~v~v~ 131 (521)
.+.+...++|.|.+|+.++++.. . + -.+.+|||++... .......+||++++.. +.|+.++ ..++++
T Consensus 230 ~~~~~~~~~P~sl~ea~~ll~~~-~--~--a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~----~~l~IG 300 (1332)
T 3unc_A 230 EGERVTWIQASTLKELLDLKAQH-P--E--AKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGP----EGISFG 300 (1332)
T ss_dssp ECSSCEEEECCSHHHHHHHHHHC-T--T--CEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECS----SEEEEE
T ss_pred cCCceEEEccCCHHHHHHHHhhC-C--C--CEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeC----CEEEEE
Confidence 34566799999999998876532 1 1 3678999996421 1112568999998531 0256544 569999
Q ss_pred CCccHHHHHHHHHHhC------------CC-----cccccCCCCcccccccccccc
Q 009956 132 GGALWEDVLKRCVEDF------------GL-----APRSWTDYLRLTVGGTLSNAG 170 (521)
Q Consensus 132 aG~~~~~l~~~~~~~~------------g~-----~p~~~~~~~~~tvGG~~~~~g 170 (521)
|++++.+|.+.+.+.- .+ ...++.--+.+||||+|+++.
T Consensus 301 A~vtl~~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~as 356 (1332)
T 3unc_A 301 AACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITAS 356 (1332)
T ss_dssp TTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCC
T ss_pred ecChHHHHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccC
Confidence 9999999987653210 01 011111122479999999864
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=92.86 E-value=0.027 Score=55.55 Aligned_cols=99 Identities=16% Similarity=0.262 Sum_probs=63.6
Q ss_pred CccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCC---CCCCCCcEEEEcCCC---CCeeEEEeccCCceEEEEe
Q 009956 58 KPLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSING---QAMADRGLVIDMGST---GDSHFEIVKVKGSTYLDVS 131 (521)
Q Consensus 58 ~p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g---~~~~~~gvvidl~~l---~~~~i~id~~~~~~~v~v~ 131 (521)
.|-..++|.|.+|..++++ +. .-.+.+|||++.. ........+||++++ +. |+.++ +..++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~----~~--~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~--I~~~~---~~~l~IG 73 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA----AE--ATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLAT--ISTLA---DGSLRIG 73 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT----ST--TEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTC--EEECT---TSCEEEE
T ss_pred CceEEEccCCHHHHHHHHh----CC--CCEEEECchhHHHHHhccCCCCCEEEECCCChhhcc--eEECC---CCeEEEc
Confidence 3446899999999877654 21 3678899999642 222236899999885 53 56554 2369999
Q ss_pred CCccHHHHHHHHH--HhCC-C-----cccccCCCCccccccccc
Q 009956 132 GGALWEDVLKRCV--EDFG-L-----APRSWTDYLRLTVGGTLS 167 (521)
Q Consensus 132 aG~~~~~l~~~~~--~~~g-~-----~p~~~~~~~~~tvGG~~~ 167 (521)
|++|+.+|.+.-. ++.. + ...++.--+.+||||+|+
T Consensus 74 A~vt~~~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNl~ 117 (324)
T 1rm6_B 74 AGATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLC 117 (324)
T ss_dssp TTCBHHHHHHCHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHT
T ss_pred cCCcHHHHHhChHHHHHHHHHHHHHHHhCCHHHcceeEeeeecc
Confidence 9999999876421 1100 0 011222223569999997
No 37
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=77.43 E-value=1 Score=52.89 Aligned_cols=101 Identities=10% Similarity=-0.018 Sum_probs=62.7
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhcCCCeEEEEcCCCCCCCC---CCCCCcEEEEcCC---CCCeeEEEeccCCceEEEEeC
Q 009956 59 PLAVIRPSGADDVAVVIKAAHLQSNLTVAARGNGHSINGQ---AMADRGLVIDMGS---TGDSHFEIVKVKGSTYLDVSG 132 (521)
Q Consensus 59 p~~vv~P~s~~ev~~~v~~a~~~~~~~v~~~G~G~~~~g~---~~~~~gvvidl~~---l~~~~i~id~~~~~~~v~v~a 132 (521)
-...++|.|.+|+.++... ..+-+ +..|+|.++-. ....-.++|++.+ |+. |+.++ ..++++|
T Consensus 240 ~~~w~~P~tl~el~~l~~~---~p~a~--lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~--i~~~~----~~l~IGA 308 (1335)
T 3zyv_A 240 RTTWIAPGTLNDLLELKMK---HPSAP--LVIGNTYLGLHMKFTDVSYPIIISPARILELFV--VTNTK----QGLTLGT 308 (1335)
T ss_dssp SCEEEECSSHHHHHHHHHH---CTTSC--BCSSCTTHHHHHC--CCCCSEEECCTTCGGGSC--EECCT----TEEEEET
T ss_pred CceEecCCCHHHHHHHHHH---CCCCe--EEEecccceeeEeecCCCCCeEEEcCcchhHhe--EEecC----CEEEEcc
Confidence 3457899999999987552 23333 45677775421 1112468999877 553 45543 5699999
Q ss_pred CccHHHHHHHHHHh---CC-----Cc---------ccccCCCCcccccccccccc
Q 009956 133 GALWEDVLKRCVED---FG-----LA---------PRSWTDYLRLTVGGTLSNAG 170 (521)
Q Consensus 133 G~~~~~l~~~~~~~---~g-----~~---------p~~~~~~~~~tvGG~~~~~g 170 (521)
+|++.++.+.+.+. .+ .+ ..+..--+.+||||+|+|+.
T Consensus 309 ~vtls~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~as 363 (1335)
T 3zyv_A 309 GLSLTQVKNVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISRL 363 (1335)
T ss_dssp TCBHHHHHHHHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTCC
T ss_pred cCcHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceeccC
Confidence 99999988776531 00 00 11111223479999999863
No 38
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=35.42 E-value=49 Score=27.17 Aligned_cols=39 Identities=10% Similarity=0.097 Sum_probs=32.6
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHhcCCCeE-EEEcCCCC
Q 009956 55 YSYKPLAVIRPSGADDVAVVIKAAHLQSNLTV-AARGNGHS 94 (521)
Q Consensus 55 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v-~~~G~G~~ 94 (521)
..+.+..|++..|++|+.++.+.| ++.++|. .++-.|..
T Consensus 45 ~~G~~Kvvlk~~~e~el~~L~~~a-~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 45 DEGQKKVVLKVKSLEELLGIKHKA-ESLGLVTGLVQDAGLT 84 (123)
T ss_dssp GGCSSEEEEECSCHHHHHHHHHHH-HHTTCCEEEECCTTCC
T ss_pred HCCCcEEEEecCCHHHHHHHHHHH-HHCCCCEEEEECCCCc
Confidence 367899999999999999999999 9999995 45555543
No 39
>1rrb_A RAF-1 RBD, RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain, transferase, riken structural genomics/proteomics initiative; NMR {Rattus norvegicus} SCOP: d.15.1.5
Probab=33.06 E-value=39 Score=26.83 Aligned_cols=29 Identities=28% Similarity=0.428 Sum_probs=22.7
Q ss_pred CceEEEEeCCccHHHHHHHHHHhCCCccc
Q 009956 124 GSTYLDVSGGALWEDVLKRCVEDFGLAPR 152 (521)
Q Consensus 124 ~~~~v~v~aG~~~~~l~~~~~~~~g~~p~ 152 (521)
+..+|.|.+|+++.+.+.++++..|+.|-
T Consensus 29 QrT~V~VrpG~tlrdaL~KaLk~R~L~pe 57 (107)
T 1rrb_A 29 QRTVVNVRNGMSLHDCLMKALKVRGLQPE 57 (107)
T ss_dssp CCEEEECCTTCBHHHHHHHHHHHHTCCTT
T ss_pred CeEEEEecCCcCHHHHHHHHHHHcCCCHH
Confidence 45689999999999988777754388763
No 40
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=29.71 E-value=73 Score=25.96 Aligned_cols=38 Identities=13% Similarity=0.110 Sum_probs=32.2
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHhcCCCeE-EEEcCCC
Q 009956 55 YSYKPLAVIRPSGADDVAVVIKAAHLQSNLTV-AARGNGH 93 (521)
Q Consensus 55 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v-~~~G~G~ 93 (521)
..+.|..|++..|++|+.++.+.| .+.++|. .++-+|+
T Consensus 52 ~~g~~Kvvlk~~~e~el~~l~~~a-~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 52 REGQKKVVVKVESEEELFKLKAEA-EKLGLPNALIRDAGL 90 (121)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHH-HHTTCCEEEEECTTC
T ss_pred HCCCcEEEEecCCHHHHHHHHHHH-HHCCCCEEEEEcCCc
Confidence 568999999999999999999999 9999986 4555554
No 41
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=29.54 E-value=72 Score=25.92 Aligned_cols=47 Identities=15% Similarity=0.135 Sum_probs=36.8
Q ss_pred hhhhhcccCCCCCCCccEEEeCCCHHHHHHHHHHHHhcCCCeE-EEEcCCC
Q 009956 44 NGSADKDFGGMYSYKPLAVIRPSGADDVAVVIKAAHLQSNLTV-AARGNGH 93 (521)
Q Consensus 44 ~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v-~~~G~G~ 93 (521)
+..+...|. ..+.|..|+...|++|+.++.+.| .+.++|. .++=+|+
T Consensus 42 ~~~~~~~W~--~~g~~KiVlk~~~e~el~~l~~~a-~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 42 WKEWLNEWL--HQGQPKIIVKVNSLDEIISRAKKA-ETMNLPFSIIEDAGK 89 (120)
T ss_dssp HHHHHHHHH--HTTCCEEEEEESSHHHHHHHHHHH-HHTTCCEEEEECCSS
T ss_pred hHHHHHHHH--HCCCcEEEEecCCHHHHHHHHHHH-HHCCCCEEEEEcCCc
Confidence 344555553 578999999999999999999999 9999995 4555554
No 42
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=28.14 E-value=62 Score=26.18 Aligned_cols=38 Identities=11% Similarity=0.116 Sum_probs=31.8
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHhcCCCeE-EEEcCCC
Q 009956 55 YSYKPLAVIRPSGADDVAVVIKAAHLQSNLTV-AARGNGH 93 (521)
Q Consensus 55 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v-~~~G~G~ 93 (521)
..+.|..|++..|.+|+.++.+.| .+.++|. .++-+|+
T Consensus 48 ~~g~~kiVlk~~~e~~l~~l~~~a-~~~gl~~~~v~DAG~ 86 (117)
T 1rlk_A 48 DEGQRKIVVKVNDLDEIMEIKRMA-DSMGIVNEIVQDRGY 86 (117)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHH-HHHTCCEEEEECCCS
T ss_pred HCCCeEEEEecCCHHHHHHHHHHH-HHCCCCEEEEEeCCc
Confidence 468999999999999999999999 9999985 4455544
No 43
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=26.35 E-value=63 Score=26.04 Aligned_cols=31 Identities=10% Similarity=0.123 Sum_probs=28.2
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHhcCCCeE
Q 009956 55 YSYKPLAVIRPSGADDVAVVIKAAHLQSNLTV 86 (521)
Q Consensus 55 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~v 86 (521)
..+.|..|++..|++|+.++.+.| .+.++|.
T Consensus 46 ~~g~~kivlk~~~e~~l~~l~~~a-~~~gl~~ 76 (115)
T 2zv3_A 46 REGQKKVVVKVNSEKELIDIYNKA-RSEGLPC 76 (115)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHH-HHHTCCE
T ss_pred HCCCeEEEEecCCHHHHHHHHHHH-HHcCCCE
Confidence 478899999999999999999999 8989885
No 44
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=25.14 E-value=1.4e+02 Score=22.74 Aligned_cols=46 Identities=15% Similarity=0.186 Sum_probs=31.7
Q ss_pred chhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHHHHHHHH
Q 009956 207 ELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTRDAELL 256 (521)
Q Consensus 207 dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~i 256 (521)
+|...| ..+|-|.++.+...+......+.++.|.+.+++..++..+
T Consensus 31 ~l~~~F----~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l 76 (105)
T 2dnh_A 31 DVLRLF----QPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHAL 76 (105)
T ss_dssp HHHHHH----TTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHH----HhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHHH
Confidence 454444 3567788888766654334567788999999888877655
No 45
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=23.84 E-value=1.2e+02 Score=23.14 Aligned_cols=46 Identities=9% Similarity=0.124 Sum_probs=32.1
Q ss_pred chhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHHHHHHHH
Q 009956 207 ELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTRDAELL 256 (521)
Q Consensus 207 dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~i 256 (521)
+|...|. .+|-|.++.+...+........++.|.+.+++.+++..+
T Consensus 45 ~l~~~F~----~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l 90 (107)
T 3ulh_A 45 DIQELFA----EFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQY 90 (107)
T ss_dssp HHHHHHH----TTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHH----hcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHHh
Confidence 4555443 567888888877664344557788999999988877755
No 46
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.51 E-value=1.5e+02 Score=22.33 Aligned_cols=46 Identities=13% Similarity=0.086 Sum_probs=31.3
Q ss_pred chhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHHHHHHHH
Q 009956 207 ELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTRDAELL 256 (521)
Q Consensus 207 dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~i 256 (521)
+|...| ..+|-|.++.+...+........++.|.+.+++..++..+
T Consensus 33 ~l~~~F----~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l 78 (100)
T 2do4_A 33 ELEEIC----KAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKM 78 (100)
T ss_dssp HHHHHH----TTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHH----HhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHHh
Confidence 455444 3567788887766553334567788999999888777655
No 47
>3ny5_A Serine/threonine-protein kinase B-RAF; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; HET: MSE; 1.99A {Homo sapiens} SCOP: d.15.1.0
Probab=22.68 E-value=94 Score=24.16 Aligned_cols=29 Identities=28% Similarity=0.322 Sum_probs=22.7
Q ss_pred CceEEEEeCCccHHHHHHHHHHhCCCccc
Q 009956 124 GSTYLDVSGGALWEDVLKRCVEDFGLAPR 152 (521)
Q Consensus 124 ~~~~v~v~aG~~~~~l~~~~~~~~g~~p~ 152 (521)
+..+|.|.+|+++.+-+.++++..|+.|-
T Consensus 24 QrT~V~VrpG~tlrdaL~KaLk~R~L~pe 52 (96)
T 3ny5_A 24 QRTVVPARCGVTVRDSLKKALMMRGLIPE 52 (96)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHTTTCCGG
T ss_pred ceEEEEecCCcCHHHHHHHHHHHcCCChH
Confidence 34579999999999988887765488663
No 48
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=22.13 E-value=1.3e+02 Score=22.27 Aligned_cols=46 Identities=13% Similarity=0.094 Sum_probs=31.3
Q ss_pred chhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHHHHHHHH
Q 009956 207 ELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTRDAELL 256 (521)
Q Consensus 207 dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~i 256 (521)
+|...+ ..+|-|.++.+...+........++.|.+.+++.+++..+
T Consensus 32 ~l~~~F----~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l 77 (95)
T 2ywk_A 32 ILYELF----LQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALL 77 (95)
T ss_dssp HHHHHH----GGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHHH
T ss_pred HHHHHH----HhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHHh
Confidence 455554 3467788887766554334557788999988887776655
No 49
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=21.60 E-value=1.7e+02 Score=23.35 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=35.7
Q ss_pred chhhhhhccCccceEEEEeEEeeEecC-----CceEEEEEEeCCHHHHHHHHHHHH
Q 009956 207 ELFFNVLGGLGQFGIITRARVLLQSAP-----DKVRWIRLVYAEFDEFTRDAELLV 257 (521)
Q Consensus 207 dl~~~~~gs~G~lGiit~~~l~l~p~p-----~~~~~~~~~~~~~~~~~~~~~~i~ 257 (521)
|+..-++--.+.+|-|+++.+-..+.. .....+++.|.+.++|.+++..+-
T Consensus 37 dleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~Ln 92 (118)
T 3ue2_A 37 DLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALN 92 (118)
T ss_dssp THHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHC
Confidence 444445544568899999988766542 234567789999999888887663
No 50
>2do0_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RNA recognition motif, RRM, RNA binding domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.71 E-value=1.7e+02 Score=22.54 Aligned_cols=46 Identities=13% Similarity=0.117 Sum_probs=31.8
Q ss_pred chhhhhhccCccceEEEEeEEeeEecCCceEEEEEEeCCHHHHHHHHHHH
Q 009956 207 ELFFNVLGGLGQFGIITRARVLLQSAPDKVRWIRLVYAEFDEFTRDAELL 256 (521)
Q Consensus 207 dl~~~~~gs~G~lGiit~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~i 256 (521)
+|...| ..+|-|.++.+...+......+.++.|.+.+++.+++..+
T Consensus 31 ~l~~~f----~~~G~i~~~~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l 76 (114)
T 2do0_A 31 KLKEVF----SMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMF 76 (114)
T ss_dssp HHHHHH----TTTSCEEEEEEEECTTCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHH----HhcCCeEEEEEEECCCCCeeeEEEEEECCHHHHHHHHHHh
Confidence 454444 3567788887766554334567788999999888877755
No 51
>1c1y_B Proto-onkogene serine/threonine protein kinase RAF-1; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: d.15.1.5 PDB: 1gua_B* 1rfa_A 3kud_B* 3kuc_B*
Probab=20.62 E-value=77 Score=23.61 Aligned_cols=29 Identities=28% Similarity=0.428 Sum_probs=22.9
Q ss_pred CceEEEEeCCccHHHHHHHHHHhCCCccc
Q 009956 124 GSTYLDVSGGALWEDVLKRCVEDFGLAPR 152 (521)
Q Consensus 124 ~~~~v~v~aG~~~~~l~~~~~~~~g~~p~ 152 (521)
+...|.|.+|+++.+-+.+++++.|+.|-
T Consensus 12 QrT~V~VrpG~tlrdaL~KaLk~R~L~pe 40 (77)
T 1c1y_B 12 QRTVVNVRNGMSLHDCLMKALKVRGLQPE 40 (77)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHTTTCCGG
T ss_pred ceEEEEecCCcCHHHHHHHHHHHcCCCHH
Confidence 34579999999999988888765488663
No 52
>1aie_A P53; oligomer, DNA; 1.50A {Homo sapiens} SCOP: a.53.1.1 PDB: 2j0z_A 1c26_A 1pes_A 1pet_A 2j10_A 1hs5_A 2j11_A
Probab=20.47 E-value=23 Score=21.47 Aligned_cols=14 Identities=29% Similarity=0.729 Sum_probs=11.2
Q ss_pred chhhHHHHhhhccC
Q 009956 489 DRWTRFRDSKKAFD 502 (521)
Q Consensus 489 ~~~~~l~~iK~~~D 502 (521)
++|+.|++||..++
T Consensus 11 e~yEml~ki~d~LE 24 (31)
T 1aie_A 11 ERFEMFRELNEALE 24 (31)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 36899999998764
Done!