Query 009957
Match_columns 521
No_of_seqs 261 out of 2102
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 16:43:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1e5x_A Threonine synthase; thr 100.0 5.6E-83 1.9E-87 689.8 40.1 459 57-518 21-482 (486)
2 1kl7_A Threonine synthase; thr 100.0 2.3E-68 8E-73 576.8 31.6 413 73-518 2-512 (514)
3 4f4f_A Threonine synthase; str 100.0 1.5E-63 5.3E-68 533.1 29.7 397 75-515 4-466 (468)
4 3v7n_A Threonine synthase; ssg 100.0 1.5E-63 5.2E-68 533.7 28.5 405 76-515 4-485 (487)
5 3aey_A Threonine synthase; PLP 100.0 7.9E-61 2.7E-65 497.8 35.3 343 141-512 4-349 (351)
6 2zsj_A Threonine synthase; PLP 100.0 1.6E-60 5.4E-65 495.7 34.2 343 140-510 5-349 (352)
7 2d1f_A Threonine synthase; ami 100.0 2.5E-60 8.5E-65 495.7 33.8 342 140-510 13-356 (360)
8 1vb3_A Threonine synthase; PLP 100.0 2.8E-61 9.7E-66 513.3 25.1 398 77-513 1-426 (428)
9 3ss7_X D-serine dehydratase; t 100.0 5.1E-56 1.7E-60 474.6 24.8 373 85-482 13-438 (442)
10 1p5j_A L-serine dehydratase; l 100.0 5E-53 1.7E-57 442.3 32.9 315 141-480 28-351 (372)
11 4h27_A L-serine dehydratase/L- 100.0 2E-52 6.8E-57 436.6 32.9 315 141-480 28-351 (364)
12 2rkb_A Serine dehydratase-like 100.0 5.8E-51 2E-55 417.9 33.6 297 165-479 6-310 (318)
13 3iau_A Threonine deaminase; py 100.0 3.2E-51 1.1E-55 427.9 29.2 293 162-474 56-350 (366)
14 2gn0_A Threonine dehydratase c 100.0 6.7E-51 2.3E-55 421.7 27.1 295 163-478 37-333 (342)
15 1ve5_A Threonine deaminase; ri 100.0 1E-50 3.6E-55 414.6 25.8 287 162-473 16-308 (311)
16 3l6b_A Serine racemase; pyrido 100.0 1.8E-50 6.3E-55 419.1 26.5 297 164-478 23-322 (346)
17 1y7l_A O-acetylserine sulfhydr 100.0 8.5E-50 2.9E-54 408.9 29.7 295 160-478 7-309 (316)
18 4d9i_A Diaminopropionate ammon 100.0 7.5E-50 2.6E-54 421.9 30.0 305 165-481 43-388 (398)
19 1v71_A Serine racemase, hypoth 100.0 2.2E-50 7.5E-55 414.6 24.0 292 164-478 24-317 (323)
20 1tdj_A Biosynthetic threonine 100.0 3.1E-50 1E-54 434.1 25.9 292 164-475 29-322 (514)
21 1ve1_A O-acetylserine sulfhydr 100.0 5.7E-49 2E-53 400.7 28.0 285 163-477 6-298 (304)
22 2q3b_A Cysteine synthase A; py 100.0 6E-49 2.1E-53 402.1 27.6 290 160-478 10-306 (313)
23 1o58_A O-acetylserine sulfhydr 100.0 5.6E-49 1.9E-53 400.8 26.9 284 158-477 12-302 (303)
24 3tbh_A O-acetyl serine sulfhyd 100.0 9E-49 3.1E-53 404.5 28.6 290 160-478 15-311 (334)
25 2v03_A Cysteine synthase B; py 100.0 1.7E-48 5.7E-53 397.2 28.7 281 160-478 4-290 (303)
26 1z7w_A Cysteine synthase; tran 100.0 1.2E-48 4.2E-53 401.4 27.3 288 160-478 9-306 (322)
27 2egu_A Cysteine synthase; O-ac 100.0 3.9E-49 1.3E-53 402.6 23.2 289 160-478 8-302 (308)
28 2pqm_A Cysteine synthase; OASS 100.0 1.3E-48 4.3E-53 404.9 26.0 290 159-478 16-317 (343)
29 3dwg_A Cysteine synthase B; su 100.0 3.1E-48 1.1E-52 399.1 25.6 282 163-479 12-308 (325)
30 4aec_A Cysteine synthase, mito 100.0 4.7E-48 1.6E-52 409.5 27.5 293 158-478 115-414 (430)
31 3vc3_A Beta-cyanoalnine syntha 100.0 2.1E-47 7.3E-52 395.7 25.7 288 164-478 33-326 (344)
32 1v8z_A Tryptophan synthase bet 100.0 3.9E-46 1.3E-50 392.0 23.0 301 166-482 50-385 (388)
33 1jbq_A B, cystathionine beta-s 100.0 3.4E-45 1.2E-49 389.2 27.7 294 161-479 103-408 (435)
34 1wkv_A Cysteine synthase; homo 100.0 1.2E-45 4.3E-50 387.8 24.0 288 157-482 85-382 (389)
35 1tzj_A ACC deaminase, 1-aminoc 100.0 3.1E-46 1.1E-50 385.7 17.6 296 160-478 9-331 (338)
36 1x1q_A Tryptophan synthase bet 100.0 2.9E-45 1E-49 389.1 23.7 304 165-482 76-414 (418)
37 4d9b_A D-cysteine desulfhydras 100.0 1.5E-45 5.2E-50 381.6 19.6 289 158-472 24-333 (342)
38 1f2d_A 1-aminocyclopropane-1-c 100.0 2.2E-45 7.6E-50 380.0 15.6 290 160-473 9-328 (341)
39 2o2e_A Tryptophan synthase bet 100.0 3.9E-44 1.3E-48 380.6 23.9 302 165-482 80-416 (422)
40 3pc3_A CG1753, isoform A; CBS, 100.0 1E-43 3.6E-48 387.7 26.9 295 161-479 55-360 (527)
41 1qop_B Tryptophan synthase bet 100.0 5.2E-44 1.8E-48 377.0 23.7 299 166-482 55-390 (396)
42 1j0a_A 1-aminocyclopropane-1-c 100.0 1.4E-43 4.6E-48 364.4 19.5 282 160-473 15-313 (325)
43 1vp8_A Hypothetical protein AF 89.5 2.4 8.2E-05 39.4 10.4 114 193-315 22-147 (201)
44 1t57_A Conserved protein MTH16 77.2 6 0.00021 36.8 7.4 113 193-315 30-153 (206)
45 2xvc_A ESCRT-III, SSO0910; cel 76.7 4.1 0.00014 30.2 4.8 35 402-436 13-55 (59)
46 4ffl_A PYLC; amino acid, biosy 66.4 53 0.0018 32.5 12.4 109 226-334 7-137 (363)
47 2kdx_A HYPA, hydrogenase/ureas 65.9 3.2 0.00011 35.4 2.6 37 71-107 61-100 (119)
48 2lcq_A Putative toxin VAPC6; P 58.8 5.5 0.00019 35.7 2.9 51 53-107 100-158 (165)
49 4fn4_A Short chain dehydrogena 57.4 20 0.00068 34.5 6.9 69 220-292 8-83 (254)
50 3h7a_A Short chain dehydrogena 54.2 57 0.0019 30.5 9.6 71 220-290 8-81 (252)
51 1vp8_A Hypothetical protein AF 53.8 1.4E+02 0.0047 27.6 12.3 150 308-489 32-188 (201)
52 3r1i_A Short-chain type dehydr 51.9 36 0.0012 32.5 7.9 71 220-290 33-106 (276)
53 3a43_A HYPD, hydrogenase nicke 51.9 3.2 0.00011 36.5 0.1 23 84-106 72-116 (139)
54 4ayb_P DNA-directed RNA polyme 51.8 7.8 0.00027 27.5 2.1 22 84-105 5-31 (48)
55 1t57_A Conserved protein MTH16 51.8 1.2E+02 0.0041 28.2 10.6 66 418-489 129-195 (206)
56 3e8x_A Putative NAD-dependent 51.0 87 0.003 28.5 10.1 51 220-274 22-73 (236)
57 3ezl_A Acetoacetyl-COA reducta 50.6 31 0.0011 32.1 7.0 73 220-292 14-90 (256)
58 3u31_A SIR2A, transcriptional 50.4 5.5 0.00019 39.4 1.6 59 221-287 219-279 (290)
59 4g81_D Putative hexonate dehyd 49.7 24 0.00082 33.9 6.0 69 220-292 10-85 (255)
60 4gkb_A 3-oxoacyl-[acyl-carrier 49.6 38 0.0013 32.4 7.5 71 220-291 8-81 (258)
61 3qiv_A Short-chain dehydrogena 47.0 45 0.0015 30.9 7.5 70 220-290 10-83 (253)
62 3ucx_A Short chain dehydrogena 46.5 47 0.0016 31.3 7.6 72 220-291 12-86 (264)
63 3edm_A Short chain dehydrogena 46.1 40 0.0014 31.7 7.0 72 220-291 9-84 (259)
64 3lyl_A 3-oxoacyl-(acyl-carrier 45.2 42 0.0014 31.0 6.9 70 221-291 7-80 (247)
65 3sc4_A Short chain dehydrogena 44.9 2.1E+02 0.007 27.1 13.6 70 220-289 10-89 (285)
66 2q2v_A Beta-D-hydroxybutyrate 44.7 71 0.0024 29.7 8.5 68 221-290 6-76 (255)
67 3v2g_A 3-oxoacyl-[acyl-carrier 44.3 42 0.0014 31.9 6.9 72 220-291 32-107 (271)
68 1yb1_A 17-beta-hydroxysteroid 44.0 53 0.0018 31.0 7.5 69 221-290 33-105 (272)
69 2ae2_A Protein (tropinone redu 43.9 67 0.0023 30.0 8.2 70 221-291 11-84 (260)
70 3awd_A GOX2181, putative polyo 43.6 45 0.0015 30.9 6.9 70 220-289 14-86 (260)
71 1p9o_A Phosphopantothenoylcyst 43.1 1.4E+02 0.0048 29.6 10.6 33 220-252 56-88 (313)
72 3tzq_B Short-chain type dehydr 42.4 1E+02 0.0035 29.0 9.4 70 220-290 12-82 (271)
73 2rhc_B Actinorhodin polyketide 42.3 58 0.002 30.9 7.5 70 221-291 24-97 (277)
74 3u5t_A 3-oxoacyl-[acyl-carrier 42.1 54 0.0019 31.1 7.3 71 220-290 28-102 (267)
75 3aw8_A PURK, phosphoribosylami 42.1 1.2E+02 0.0039 30.0 10.1 96 227-326 6-115 (369)
76 3afn_B Carbonyl reductase; alp 41.7 76 0.0026 29.1 8.2 69 221-289 9-81 (258)
77 3v8b_A Putative dehydrogenase, 41.7 44 0.0015 32.0 6.6 69 221-290 30-102 (283)
78 1e8j_A Rubredoxin; iron-sulfur 41.5 12 0.00042 27.1 1.8 14 77-94 2-15 (52)
79 2hq1_A Glucose/ribitol dehydro 41.0 59 0.002 29.8 7.2 57 221-277 7-64 (247)
80 3gem_A Short chain dehydrogena 40.7 72 0.0025 30.0 7.9 68 221-291 29-97 (260)
81 2jah_A Clavulanic acid dehydro 40.6 56 0.0019 30.4 7.0 66 221-290 9-81 (247)
82 3sju_A Keto reductase; short-c 40.6 49 0.0017 31.5 6.7 70 221-290 26-98 (279)
83 3gaf_A 7-alpha-hydroxysteroid 40.5 41 0.0014 31.6 6.1 71 220-290 13-86 (256)
84 6rxn_A Rubredoxin; electron tr 40.3 9.3 0.00032 27.1 1.0 15 76-94 2-16 (46)
85 1geg_A Acetoin reductase; SDR 40.0 65 0.0022 30.0 7.4 70 221-291 4-77 (256)
86 3h0g_L DNA-directed RNA polyme 39.8 15 0.00052 27.8 2.2 29 75-107 18-48 (63)
87 3rkr_A Short chain oxidoreduct 39.6 53 0.0018 30.8 6.8 68 221-289 31-102 (262)
88 3ijr_A Oxidoreductase, short c 39.5 64 0.0022 30.9 7.5 70 221-290 49-122 (291)
89 3tfo_A Putative 3-oxoacyl-(acy 39.5 52 0.0018 31.2 6.7 69 221-290 6-78 (264)
90 3i6i_A Putative leucoanthocyan 39.3 1.2E+02 0.004 29.5 9.5 54 221-274 12-68 (346)
91 3is3_A 17BETA-hydroxysteroid d 39.1 57 0.0019 30.8 6.9 70 221-290 20-93 (270)
92 3oid_A Enoyl-[acyl-carrier-pro 39.1 46 0.0016 31.3 6.2 70 221-290 6-79 (258)
93 3imf_A Short chain dehydrogena 38.8 34 0.0012 32.2 5.2 66 221-290 8-80 (257)
94 3ksu_A 3-oxoacyl-acyl carrier 38.8 99 0.0034 29.0 8.6 70 221-291 13-89 (262)
95 1kjq_A GART 2, phosphoribosylg 38.7 99 0.0034 30.7 9.0 26 226-251 17-42 (391)
96 2dwc_A PH0318, 433AA long hypo 38.5 1.2E+02 0.0041 30.7 9.7 40 288-327 101-141 (433)
97 3tjr_A Short chain dehydrogena 38.5 57 0.0019 31.5 6.9 70 220-290 32-105 (301)
98 4e3z_A Putative oxidoreductase 38.3 65 0.0022 30.3 7.2 70 221-290 28-101 (272)
99 3cxt_A Dehydrogenase with diff 38.3 59 0.002 31.3 6.9 70 221-291 36-109 (291)
100 3qlj_A Short chain dehydrogena 38.0 78 0.0027 30.7 7.9 70 221-290 29-111 (322)
101 3ged_A Short-chain dehydrogena 37.9 97 0.0033 29.4 8.3 68 221-292 4-74 (247)
102 1uc8_A LYSX, lysine biosynthes 37.8 1.2E+02 0.004 28.2 8.9 102 223-328 4-109 (280)
103 2gk4_A Conserved hypothetical 37.7 78 0.0027 30.0 7.4 27 226-252 26-52 (232)
104 4dmm_A 3-oxoacyl-[acyl-carrier 37.5 46 0.0016 31.5 6.0 70 221-290 30-103 (269)
105 3ax6_A Phosphoribosylaminoimid 37.4 1.5E+02 0.005 29.4 10.0 98 227-328 8-121 (380)
106 1zem_A Xylitol dehydrogenase; 37.2 63 0.0022 30.2 6.9 69 221-290 9-81 (262)
107 1m2k_A Silent information regu 37.1 11 0.00039 36.1 1.5 26 84-109 123-154 (249)
108 4ibo_A Gluconate dehydrogenase 37.1 46 0.0016 31.6 5.9 68 220-291 27-101 (271)
109 3a28_C L-2.3-butanediol dehydr 36.8 64 0.0022 30.1 6.8 68 221-290 4-78 (258)
110 3osu_A 3-oxoacyl-[acyl-carrier 36.8 62 0.0021 30.0 6.7 70 221-290 6-79 (246)
111 2r6j_A Eugenol synthase 1; phe 36.4 1E+02 0.0035 29.4 8.4 54 221-274 13-66 (318)
112 2o23_A HADH2 protein; HSD17B10 36.1 1.3E+02 0.0046 27.6 9.0 68 220-290 13-83 (265)
113 3tpc_A Short chain alcohol deh 36.0 1E+02 0.0034 28.7 8.0 68 220-290 8-78 (257)
114 3oig_A Enoyl-[acyl-carrier-pro 35.6 1.1E+02 0.0038 28.4 8.3 69 221-290 9-84 (266)
115 3rih_A Short chain dehydrogena 35.6 69 0.0024 30.9 7.0 70 221-290 43-116 (293)
116 2v3b_B Rubredoxin 2, rubredoxi 35.6 12 0.00041 27.4 1.0 15 77-95 2-16 (55)
117 4da9_A Short-chain dehydrogena 35.4 56 0.0019 31.1 6.2 70 221-290 31-104 (280)
118 3svt_A Short-chain type dehydr 35.4 83 0.0028 29.8 7.4 71 220-290 12-88 (281)
119 3p19_A BFPVVD8, putative blue 35.4 1E+02 0.0035 29.0 8.1 67 220-290 17-84 (266)
120 1fmc_A 7 alpha-hydroxysteroid 35.1 53 0.0018 30.2 5.9 68 221-289 13-84 (255)
121 2kn9_A Rubredoxin; metalloprot 34.9 12 0.00042 29.7 1.0 15 76-94 25-39 (81)
122 3kvo_A Hydroxysteroid dehydrog 34.8 1.3E+02 0.0045 29.7 9.1 72 220-291 46-127 (346)
123 1uls_A Putative 3-oxoacyl-acyl 34.2 1.2E+02 0.0041 27.9 8.3 66 221-290 7-74 (245)
124 4iin_A 3-ketoacyl-acyl carrier 34.1 57 0.0019 30.8 6.0 70 221-290 31-104 (271)
125 3fwz_A Inner membrane protein 34.0 1.2E+02 0.0043 25.3 7.6 48 222-274 10-57 (140)
126 1yuz_A Nigerythrin; rubrythrin 33.9 15 0.00052 34.2 1.7 26 76-106 169-195 (202)
127 3o26_A Salutaridine reductase; 33.8 2.7E+02 0.0092 26.0 10.9 31 220-250 13-43 (311)
128 1ae1_A Tropinone reductase-I; 33.8 97 0.0033 29.2 7.6 67 221-291 23-96 (273)
129 2c07_A 3-oxoacyl-(acyl-carrier 33.7 78 0.0027 30.0 6.9 69 221-290 46-118 (285)
130 1gee_A Glucose 1-dehydrogenase 33.6 72 0.0024 29.5 6.5 70 221-290 9-82 (261)
131 1ja9_A 4HNR, 1,3,6,8-tetrahydr 33.6 58 0.002 30.3 5.9 70 221-290 23-96 (274)
132 4iiu_A 3-oxoacyl-[acyl-carrier 33.4 75 0.0026 29.7 6.7 70 221-290 28-101 (267)
133 4e6p_A Probable sorbitol dehyd 33.3 1E+02 0.0035 28.7 7.6 68 221-292 10-81 (259)
134 3uog_A Alcohol dehydrogenase; 33.3 90 0.0031 30.9 7.6 47 220-271 191-237 (363)
135 4imr_A 3-oxoacyl-(acyl-carrier 33.2 1.1E+02 0.0039 28.9 8.0 67 221-287 35-104 (275)
136 3h4t_A Glycosyltransferase GTF 33.1 2.7E+02 0.0091 27.6 11.2 49 225-278 8-58 (404)
137 2uvd_A 3-oxoacyl-(acyl-carrier 33.0 62 0.0021 29.9 6.0 70 221-290 6-79 (246)
138 3gaz_A Alcohol dehydrogenase s 32.9 79 0.0027 31.1 7.0 46 220-270 152-197 (343)
139 1twf_L ABC10-alpha, DNA-direct 32.9 18 0.00061 27.9 1.7 27 75-105 25-53 (70)
140 2zat_A Dehydrogenase/reductase 32.8 67 0.0023 29.9 6.2 69 221-290 16-88 (260)
141 1wfh_A Zinc finger (AN1-like) 32.8 25 0.00086 26.6 2.4 27 83-111 16-42 (64)
142 4eye_A Probable oxidoreductase 32.8 76 0.0026 31.2 6.9 48 220-271 161-208 (342)
143 1dx8_A Rubredoxin; electron tr 32.5 16 0.00053 28.3 1.3 15 77-95 6-20 (70)
144 3krt_A Crotonyl COA reductase; 32.5 1.3E+02 0.0044 30.9 8.8 47 221-271 231-277 (456)
145 3e03_A Short chain dehydrogena 32.4 1.7E+02 0.0059 27.4 9.1 71 220-290 7-87 (274)
146 3pxx_A Carveol dehydrogenase; 32.2 85 0.0029 29.5 6.9 71 220-290 11-96 (287)
147 2ew8_A (S)-1-phenylethanol deh 32.2 1.8E+02 0.006 26.8 9.0 68 221-290 9-79 (249)
148 4rxn_A Rubredoxin; electron tr 32.1 17 0.00058 26.6 1.3 15 77-95 2-16 (54)
149 1vl8_A Gluconate 5-dehydrogena 32.0 70 0.0024 30.2 6.2 66 221-290 23-96 (267)
150 1xg5_A ARPG836; short chain de 31.9 1.1E+02 0.0037 28.7 7.6 68 221-289 34-107 (279)
151 3uf0_A Short-chain dehydrogena 31.8 85 0.0029 29.8 6.8 56 220-276 32-87 (273)
152 1sby_A Alcohol dehydrogenase; 31.7 1.1E+02 0.0036 28.4 7.4 68 221-290 7-81 (254)
153 2z1n_A Dehydrogenase; reductas 31.7 94 0.0032 28.9 7.0 68 221-292 9-85 (260)
154 3t7c_A Carveol dehydrogenase; 31.7 88 0.003 30.0 7.0 71 220-290 29-114 (299)
155 1wg2_A Zinc finger (AN1-like) 31.6 28 0.00096 26.4 2.5 27 83-111 16-42 (64)
156 1wma_A Carbonyl reductase [NAD 31.5 59 0.002 30.1 5.6 30 221-250 6-36 (276)
157 3nrc_A Enoyl-[acyl-carrier-pro 31.4 1.2E+02 0.004 28.7 7.8 69 221-291 28-101 (280)
158 3pk0_A Short-chain dehydrogena 31.3 66 0.0023 30.2 5.9 69 221-290 12-85 (262)
159 3s55_A Putative short-chain de 31.3 90 0.0031 29.4 6.9 71 220-290 11-96 (281)
160 3gk3_A Acetoacetyl-COA reducta 31.3 54 0.0018 30.9 5.3 70 221-290 27-100 (269)
161 1edo_A Beta-keto acyl carrier 31.3 79 0.0027 28.8 6.3 70 221-290 3-76 (244)
162 2pd4_A Enoyl-[acyl-carrier-pro 31.2 2.1E+02 0.0071 26.7 9.5 70 221-291 8-82 (275)
163 3zu3_A Putative reductase YPO4 31.1 3.4E+02 0.012 27.8 11.5 99 192-292 21-136 (405)
164 2b4q_A Rhamnolipids biosynthes 31.0 88 0.003 29.6 6.8 30 221-250 31-60 (276)
165 3ek2_A Enoyl-(acyl-carrier-pro 30.9 83 0.0028 29.2 6.5 72 220-292 15-91 (271)
166 3kkj_A Amine oxidase, flavin-c 30.7 46 0.0016 29.5 4.4 25 226-250 8-32 (336)
167 1h5q_A NADP-dependent mannitol 30.5 1.7E+02 0.0059 26.8 8.7 71 220-291 15-90 (265)
168 3ctm_A Carbonyl reductase; alc 30.5 82 0.0028 29.5 6.5 68 221-289 36-107 (279)
169 3n74_A 3-ketoacyl-(acyl-carrie 30.3 99 0.0034 28.6 6.9 66 221-290 11-80 (261)
170 4g81_D Putative hexonate dehyd 30.3 1.6E+02 0.0054 28.0 8.4 83 245-332 10-96 (255)
171 3pwf_A Rubrerythrin; non heme 30.0 20 0.0007 32.4 1.8 26 76-106 136-162 (170)
172 3c85_A Putative glutathione-re 29.8 2.7E+02 0.0093 24.0 12.8 46 222-272 42-88 (183)
173 3sx2_A Putative 3-ketoacyl-(ac 29.8 83 0.0028 29.6 6.3 71 220-290 14-99 (278)
174 3tox_A Short chain dehydrogena 29.6 56 0.0019 31.3 5.1 66 221-290 10-82 (280)
175 2et6_A (3R)-hydroxyacyl-COA de 29.6 1.6E+02 0.0055 31.7 9.2 69 221-291 324-393 (604)
176 2bd0_A Sepiapterin reductase; 29.6 1.3E+02 0.0044 27.4 7.5 66 221-290 4-83 (244)
177 3qwb_A Probable quinone oxidor 29.6 98 0.0034 30.1 7.0 48 220-271 150-197 (334)
178 3l6e_A Oxidoreductase, short-c 29.5 97 0.0033 28.5 6.6 66 221-290 5-74 (235)
179 1w6u_A 2,4-dienoyl-COA reducta 29.5 97 0.0033 29.4 6.8 67 221-291 28-102 (302)
180 3qvo_A NMRA family protein; st 29.3 2.9E+02 0.01 24.9 10.0 30 221-250 25-55 (236)
181 3gqv_A Enoyl reductase; medium 29.0 96 0.0033 30.9 6.9 47 220-271 166-212 (371)
182 3pgx_A Carveol dehydrogenase; 28.9 1.1E+02 0.0036 28.9 7.0 71 220-290 16-102 (280)
183 4ekn_B Aspartate carbamoyltran 28.8 1.5E+02 0.005 29.3 8.0 46 229-274 163-210 (306)
184 3uve_A Carveol dehydrogenase ( 28.8 1E+02 0.0036 29.1 6.9 71 220-290 12-101 (286)
185 1wfp_A Zinc finger (AN1-like) 28.6 31 0.0011 26.9 2.3 27 83-111 26-52 (74)
186 3op4_A 3-oxoacyl-[acyl-carrier 28.6 81 0.0028 29.3 5.9 66 221-290 11-80 (248)
187 3ai3_A NADPH-sorbose reductase 28.3 93 0.0032 29.0 6.3 66 221-290 9-82 (263)
188 3nyw_A Putative oxidoreductase 28.3 1.2E+02 0.0043 28.0 7.2 31 220-250 8-38 (250)
189 3f1l_A Uncharacterized oxidore 28.3 1.3E+02 0.0044 27.9 7.3 68 220-291 13-90 (252)
190 1iy8_A Levodione reductase; ox 28.2 88 0.003 29.2 6.2 66 221-290 15-89 (267)
191 1v3u_A Leukotriene B4 12- hydr 28.2 1.4E+02 0.0048 28.9 7.9 47 220-270 147-193 (333)
192 4fgs_A Probable dehydrogenase 27.9 1.3E+02 0.0046 28.9 7.5 69 220-292 30-102 (273)
193 1yxm_A Pecra, peroxisomal tran 27.8 1.1E+02 0.0038 29.0 6.9 69 221-290 20-97 (303)
194 2qq5_A DHRS1, dehydrogenase/re 27.8 1.1E+02 0.0036 28.5 6.7 30 221-250 7-36 (260)
195 4fs3_A Enoyl-[acyl-carrier-pro 27.7 1.6E+02 0.0056 27.4 8.0 72 220-292 7-85 (256)
196 4fn4_A Short chain dehydrogena 27.7 1.5E+02 0.0052 28.1 7.8 82 245-331 8-93 (254)
197 3tsc_A Putative oxidoreductase 27.6 1.2E+02 0.004 28.6 7.0 71 220-290 12-98 (277)
198 3ak4_A NADH-dependent quinucli 27.6 93 0.0032 28.9 6.2 66 221-290 14-83 (263)
199 3r3s_A Oxidoreductase; structu 27.5 97 0.0033 29.6 6.5 70 221-290 51-125 (294)
200 1q1a_A HST2 protein; ternary c 27.3 14 0.00047 36.3 0.2 26 84-109 138-175 (289)
201 4dqx_A Probable oxidoreductase 27.2 1.2E+02 0.004 28.8 6.9 66 221-290 29-98 (277)
202 3qiv_A Short-chain dehydrogena 26.9 1.6E+02 0.0055 27.0 7.7 83 245-332 10-96 (253)
203 1yc5_A NAD-dependent deacetyla 26.8 13 0.00043 35.7 -0.2 26 84-109 123-157 (246)
204 3grk_A Enoyl-(acyl-carrier-pro 26.7 99 0.0034 29.6 6.3 71 220-291 32-107 (293)
205 1ml4_A Aspartate transcarbamoy 26.7 1.8E+02 0.006 28.7 8.2 50 229-279 167-217 (308)
206 3bbn_B Ribosomal protein S2; s 26.6 1.7E+02 0.0058 27.7 7.7 37 322-368 157-193 (231)
207 4b7c_A Probable oxidoreductase 26.6 1.7E+02 0.0059 28.3 8.2 49 219-271 150-199 (336)
208 3rkr_A Short chain oxidoreduct 26.6 1.6E+02 0.0054 27.4 7.7 83 245-332 30-116 (262)
209 3l77_A Short-chain alcohol deh 26.4 63 0.0022 29.5 4.7 65 221-289 4-76 (235)
210 3ftp_A 3-oxoacyl-[acyl-carrier 26.4 60 0.0021 30.8 4.6 30 221-250 30-59 (270)
211 2wm3_A NMRA-like family domain 26.3 1.7E+02 0.0058 27.5 8.0 52 221-274 7-59 (299)
212 2pd6_A Estradiol 17-beta-dehyd 26.3 98 0.0034 28.6 6.1 30 221-250 9-38 (264)
213 3gvc_A Oxidoreductase, probabl 26.2 1E+02 0.0035 29.3 6.3 66 221-290 31-100 (277)
214 3ew7_A LMO0794 protein; Q8Y8U8 26.2 1.4E+02 0.0049 26.3 7.0 48 221-273 2-49 (221)
215 3icc_A Putative 3-oxoacyl-(acy 26.1 1.8E+02 0.0063 26.5 8.0 67 221-287 9-79 (255)
216 3glr_A NAD-dependent deacetyla 25.8 20 0.00068 35.3 1.0 26 84-109 141-175 (285)
217 2cfc_A 2-(R)-hydroxypropyl-COM 25.8 91 0.0031 28.5 5.7 30 221-250 4-33 (250)
218 2bgk_A Rhizome secoisolaricire 25.8 1.9E+02 0.0066 26.7 8.1 31 220-250 17-47 (278)
219 4ep1_A Otcase, ornithine carba 25.5 2.8E+02 0.0095 27.8 9.4 58 220-278 180-242 (340)
220 1u7z_A Coenzyme A biosynthesis 25.5 2.2E+02 0.0074 26.7 8.2 23 228-250 33-55 (226)
221 3zv4_A CIS-2,3-dihydrobiphenyl 25.3 1.3E+02 0.0043 28.6 6.8 66 221-290 7-76 (281)
222 2fwm_X 2,3-dihydro-2,3-dihydro 25.3 2.4E+02 0.0082 25.9 8.6 63 221-291 9-72 (250)
223 3hut_A Putative branched-chain 25.3 1.4E+02 0.0049 28.6 7.3 31 219-249 72-102 (358)
224 4dim_A Phosphoribosylglycinami 25.3 1.1E+02 0.0038 30.5 6.7 92 226-319 13-121 (403)
225 3v2h_A D-beta-hydroxybutyrate 25.2 1.7E+02 0.0059 27.6 7.7 68 221-291 27-102 (281)
226 4egf_A L-xylulose reductase; s 25.1 66 0.0023 30.3 4.6 69 221-290 22-95 (266)
227 4dyv_A Short-chain dehydrogena 24.9 1.2E+02 0.004 28.8 6.4 66 221-290 30-99 (272)
228 4ibo_A Gluconate dehydrogenase 24.9 2.4E+02 0.0083 26.4 8.7 83 245-332 27-113 (271)
229 3m1a_A Putative dehydrogenase; 24.9 1.3E+02 0.0044 28.2 6.7 66 221-290 7-76 (281)
230 3ppi_A 3-hydroxyacyl-COA dehyd 24.8 1.7E+02 0.0058 27.4 7.5 67 220-291 31-101 (281)
231 2hcy_A Alcohol dehydrogenase 1 24.7 1.6E+02 0.0055 28.7 7.6 48 219-270 170-217 (347)
232 1q14_A HST2 protein; histone d 24.6 19 0.00065 36.7 0.6 26 84-109 146-183 (361)
233 1x1t_A D(-)-3-hydroxybutyrate 24.5 1.2E+02 0.004 28.2 6.3 69 221-290 6-80 (260)
234 1wff_A Riken cDNA 2810002D23 p 24.5 42 0.0014 26.9 2.5 28 83-111 26-53 (85)
235 3s8m_A Enoyl-ACP reductase; ro 24.3 1.7E+02 0.0059 30.2 7.8 72 220-291 62-149 (422)
236 1yde_A Retinal dehydrogenase/r 24.3 1.7E+02 0.0058 27.4 7.4 67 220-290 10-79 (270)
237 1g0o_A Trihydroxynaphthalene r 24.2 1.3E+02 0.0044 28.4 6.6 70 221-290 31-104 (283)
238 1lko_A Rubrerythrin all-iron(I 24.2 18 0.00062 33.3 0.3 26 77-106 154-180 (191)
239 2x9g_A PTR1, pteridine reducta 24.2 1.2E+02 0.0041 28.7 6.3 70 221-290 25-103 (288)
240 1p5j_A L-serine dehydratase; l 24.0 5.4E+02 0.018 25.5 12.4 37 323-369 93-130 (372)
241 3llv_A Exopolyphosphatase-rela 24.0 2.3E+02 0.0079 23.3 7.5 47 222-273 9-55 (141)
242 1xq1_A Putative tropinone redu 23.9 1.2E+02 0.0042 28.0 6.3 67 221-288 16-86 (266)
243 3rwb_A TPLDH, pyridoxal 4-dehy 23.8 1.1E+02 0.0037 28.3 5.9 67 220-290 7-77 (247)
244 4fc7_A Peroxisomal 2,4-dienoyl 23.8 1.2E+02 0.0039 28.7 6.1 69 221-290 29-102 (277)
245 1pvv_A Otcase, ornithine carba 23.8 3.4E+02 0.012 26.7 9.6 59 220-279 156-219 (315)
246 1s5p_A NAD-dependent deacetyla 23.6 24 0.00081 33.5 1.0 32 222-253 171-204 (235)
247 3jyn_A Quinone oxidoreductase; 23.6 1.1E+02 0.0038 29.7 6.1 47 221-271 143-189 (325)
248 4fgs_A Probable dehydrogenase 23.6 1.9E+02 0.0064 27.8 7.6 87 241-332 26-113 (273)
249 1vlv_A Otcase, ornithine carba 23.4 3.5E+02 0.012 26.8 9.7 50 229-279 178-232 (325)
250 3oec_A Carveol dehydrogenase ( 23.4 1.2E+02 0.004 29.5 6.2 70 221-290 48-132 (317)
251 4eso_A Putative oxidoreductase 23.3 1.4E+02 0.0049 27.7 6.7 67 220-290 9-79 (255)
252 1ma3_A SIR2-AF2, transcription 23.3 26 0.00089 33.6 1.3 26 84-109 125-160 (253)
253 1xkq_A Short-chain reductase f 23.3 1E+02 0.0034 29.2 5.5 66 221-290 8-83 (280)
254 1xhl_A Short-chain dehydrogena 23.2 1E+02 0.0034 29.6 5.6 66 221-290 28-103 (297)
255 2pnf_A 3-oxoacyl-[acyl-carrier 23.2 1.1E+02 0.0039 27.7 5.8 66 221-290 9-82 (248)
256 4a2c_A Galactitol-1-phosphate 23.1 3E+02 0.01 26.5 9.2 48 222-272 163-210 (346)
257 1jzt_A Hypothetical 27.5 kDa p 22.9 2.3E+02 0.0077 26.8 7.9 33 221-253 60-95 (246)
258 3sju_A Keto reductase; short-c 22.9 2.1E+02 0.0073 26.9 7.9 83 245-332 25-111 (279)
259 2wyu_A Enoyl-[acyl carrier pro 22.9 2.7E+02 0.0094 25.6 8.6 69 221-290 10-83 (261)
260 3fwz_A Inner membrane protein 22.8 3.2E+02 0.011 22.5 9.2 94 247-362 10-105 (140)
261 1nff_A Putative oxidoreductase 22.8 1.3E+02 0.0046 27.9 6.3 66 221-290 9-78 (260)
262 3ioy_A Short-chain dehydrogena 22.6 1.4E+02 0.0046 29.1 6.5 70 221-291 10-85 (319)
263 2i6u_A Otcase, ornithine carba 22.5 3.8E+02 0.013 26.2 9.7 50 229-279 159-213 (307)
264 2q3b_A Cysteine synthase A; py 22.5 5.1E+02 0.018 24.7 12.4 35 324-368 68-103 (313)
265 2p91_A Enoyl-[acyl-carrier-pro 22.4 2.5E+02 0.0087 26.3 8.3 70 221-291 23-97 (285)
266 3i1j_A Oxidoreductase, short c 22.4 1.6E+02 0.0053 26.9 6.6 30 221-250 16-45 (247)
267 1qsg_A Enoyl-[acyl-carrier-pro 22.4 2.7E+02 0.0093 25.7 8.4 71 221-292 11-86 (265)
268 3grp_A 3-oxoacyl-(acyl carrier 22.3 1.3E+02 0.0045 28.2 6.2 66 221-290 29-98 (266)
269 1s24_A Rubredoxin 2; electron 22.2 24 0.00081 28.5 0.6 15 76-94 33-47 (87)
270 3csu_A Protein (aspartate carb 22.2 2.5E+02 0.0085 27.7 8.3 45 229-273 166-212 (310)
271 1yk4_A Rubredoxin, RD; electro 22.2 28 0.00095 25.2 0.9 14 78-95 2-15 (52)
272 3lf2_A Short chain oxidoreduct 22.2 1.7E+02 0.0059 27.2 7.0 67 220-290 9-84 (265)
273 3v8b_A Putative dehydrogenase, 22.0 1.9E+02 0.0065 27.4 7.3 83 245-332 29-115 (283)
274 1sny_A Sniffer CG10964-PA; alp 22.0 1.2E+02 0.0042 28.0 5.8 66 221-287 23-94 (267)
275 2q5c_A NTRC family transcripti 21.9 4.4E+02 0.015 23.7 12.3 43 417-469 125-169 (196)
276 1qyc_A Phenylcoumaran benzylic 21.9 1.3E+02 0.0046 28.2 6.2 57 221-279 6-67 (308)
277 3tfo_A Putative 3-oxoacyl-(acy 21.8 2.2E+02 0.0074 26.8 7.6 83 245-332 5-91 (264)
278 3qp9_A Type I polyketide synth 21.8 1.6E+02 0.0055 31.1 7.3 68 220-287 252-337 (525)
279 3gms_A Putative NADPH:quinone 21.8 1.1E+02 0.0038 29.9 5.7 48 220-271 146-193 (340)
280 4fk1_A Putative thioredoxin re 21.8 86 0.003 29.8 4.8 31 218-249 5-35 (304)
281 3gdg_A Probable NADP-dependent 21.7 1.4E+02 0.0046 27.8 6.1 71 221-291 22-99 (267)
282 3k31_A Enoyl-(acyl-carrier-pro 21.7 2.2E+02 0.0074 27.1 7.7 70 221-291 32-106 (296)
283 2a4k_A 3-oxoacyl-[acyl carrier 21.7 1.4E+02 0.0047 28.0 6.1 66 221-290 8-77 (263)
284 2d1y_A Hypothetical protein TT 21.6 2.8E+02 0.0094 25.5 8.3 66 221-290 8-74 (256)
285 1wfl_A Zinc finger protein 216 21.5 40 0.0014 26.2 1.8 27 83-111 26-52 (74)
286 3tox_A Short chain dehydrogena 21.5 2.6E+02 0.0088 26.4 8.2 83 245-332 9-95 (280)
287 1zmt_A Haloalcohol dehalogenas 21.5 39 0.0013 31.6 2.1 66 221-289 3-68 (254)
288 4ggo_A Trans-2-enoyl-COA reduc 21.4 1.9E+02 0.0064 29.7 7.3 73 220-292 51-139 (401)
289 4e4t_A Phosphoribosylaminoimid 21.3 2.3E+02 0.0079 28.7 8.2 32 222-253 37-68 (419)
290 2d1f_A Threonine synthase; ami 21.3 5.8E+02 0.02 25.0 11.1 35 324-368 86-122 (360)
291 2ph3_A 3-oxoacyl-[acyl carrier 21.2 1E+02 0.0035 28.0 5.0 69 221-289 3-76 (245)
292 4dqx_A Probable oxidoreductase 21.2 4.9E+02 0.017 24.2 10.1 83 245-332 28-111 (277)
293 3o38_A Short chain dehydrogena 21.2 3.3E+02 0.011 25.0 8.8 30 221-250 24-54 (266)
294 3c1o_A Eugenol synthase; pheny 21.1 1.7E+02 0.0057 27.8 6.7 54 221-274 6-64 (321)
295 2gas_A Isoflavone reductase; N 21.1 1.8E+02 0.0061 27.3 6.9 54 221-274 4-63 (307)
296 3lyl_A 3-oxoacyl-(acyl-carrier 21.0 2.6E+02 0.009 25.3 7.9 83 245-332 6-92 (247)
297 2dtx_A Glucose 1-dehydrogenase 20.9 2.9E+02 0.01 25.6 8.3 61 221-290 10-71 (264)
298 3k5i_A Phosphoribosyl-aminoimi 20.9 4E+02 0.014 26.7 9.9 108 222-337 26-153 (403)
299 3pi7_A NADH oxidoreductase; gr 20.8 85 0.0029 30.8 4.6 47 221-271 167-213 (349)
300 1zsy_A Mitochondrial 2-enoyl t 20.8 1.5E+02 0.005 29.2 6.4 51 221-271 170-220 (357)
301 3ucx_A Short chain dehydrogena 20.8 3.7E+02 0.013 24.8 9.1 83 245-332 12-98 (264)
302 1pqw_A Polyketide synthase; ro 20.7 2.4E+02 0.0082 24.7 7.3 47 220-270 40-86 (198)
303 3gaf_A 7-alpha-hydroxysteroid 20.5 2E+02 0.0068 26.6 7.0 83 245-332 13-99 (256)
304 3dii_A Short-chain dehydrogena 20.4 3E+02 0.01 25.1 8.3 66 221-290 4-72 (247)
305 1xu9_A Corticosteroid 11-beta- 20.3 1.5E+02 0.0051 28.0 6.1 30 221-250 30-59 (286)
306 3r6d_A NAD-dependent epimerase 20.2 1.6E+02 0.0056 26.2 6.1 55 221-279 7-63 (221)
307 1yb5_A Quinone oxidoreductase; 20.2 3.5E+02 0.012 26.4 9.1 47 220-270 172-218 (351)
308 3u0b_A Oxidoreductase, short c 20.2 1.5E+02 0.0052 30.6 6.6 70 220-291 214-285 (454)
309 3imf_A Short chain dehydrogena 20.1 2.2E+02 0.0075 26.3 7.2 82 245-331 7-92 (257)
310 2apo_B Ribosome biogenesis pro 20.0 42 0.0014 25.1 1.5 24 84-111 8-32 (60)
311 4dry_A 3-oxoacyl-[acyl-carrier 20.0 97 0.0033 29.5 4.7 75 218-292 32-110 (281)
No 1
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=5.6e-83 Score=689.79 Aligned_cols=459 Identities=89% Similarity=1.384 Sum_probs=385.8
Q ss_pred CcchHHHHHhcCCC--CCCccceeecCCCCCC-CCCCccCCCCceeecCCCCcceeccccchhccCChHHHHHhhhhccC
Q 009957 57 DENIRDEARRQRST--TNNTFSAKYVPFNAGP-DSPEFYSLDEIVYRSRSGGLLDVQHDMESLKKFDGAYWRDLFDSRVG 133 (521)
Q Consensus 57 ~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~-~cg~~~~~~~~~~~c~cGGll~~~~d~~~~~~~~~~~~~~~~~~~~~ 133 (521)
.+|||+||++..+. +.....|+|+ +|| +|+++|+|++++++|+|||||++.||++.+|.++.+.|+.++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~m~c~---~~~~~~~~~~~~~~~~~~~~~ggl~~~~~d~~~~~~~~~~~~~~~~~~~~~ 97 (486)
T 1e5x_A 21 EDNIRDEARRNRSNAVNPFSAKYVPF---NAAPGSTESYSLDEIVYRSRSGGLLDVEHDMEALKRFDGAYWRDLFDSRVG 97 (486)
T ss_dssp HHHHCCC------CCCCCCCEEEEES---SCSSCCCBCTTSCCCBCC----CBEEEEECHHHHHTSCHHHHHHHHHTTTT
T ss_pred CccHHHHhhhccccccccCCceEEec---cCCCCCCcccChHHheecCCCCCEEEEEecccccCcCCHHHHHHHHHhhhh
Confidence 38999999885554 3344689999 774 78999999999999999999999999999999999889888877776
Q ss_pred CCCCCCCCccccccccccCCCCcchhhcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHH
Q 009957 134 KTTWPYGSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRL 213 (521)
Q Consensus 134 ~~~~~~~~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~ 213 (521)
...++|..+||||++++.|.++.+.++++++|.|||++++++++..+|..+||+|+|++||||||||||++++++.+.++
T Consensus 98 ~~~~~~~~~i~~y~e~l~p~~~~~~iv~l~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~ 177 (486)
T 1e5x_A 98 KSTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRL 177 (486)
T ss_dssp CCCTTTTSTTGGGGGGTCTTCCGGGCCCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHH
T ss_pred hhcccccccceeHHhhcCCcccccccccccCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHH
Confidence 67778888999999964488776788999999999999998865313545899999999999999999999999988776
Q ss_pred HhcCCCceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCc
Q 009957 214 RKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPI 293 (521)
Q Consensus 214 ~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~ 293 (521)
.+.+++..+|+++||||||+|+|++|++.|++|+|++|+++++..|+.||+.+||+|+.++|+||+|++.+++++++.++
T Consensus 178 ~~~~~g~~~Vv~aSsGNtG~AlA~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g~~dd~~~~a~~l~~~~~~ 257 (486)
T 1e5x_A 178 RKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREITAELPI 257 (486)
T ss_dssp HHTTCCCCEEEECCCSHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSCE
T ss_pred HHcCCCCeEEEEcCCCHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCE
Confidence 55555467899999999999999999999999999999976899999999999999999999999999999999988899
Q ss_pred cccCCCChHhHhhHHHHHHHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHH
Q 009957 294 YLANSLNSLRLEGQKTAAVEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYY 373 (521)
Q Consensus 294 ~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~ 373 (521)
|++|++||++++||+|+++||++|++|..||+||||+|+||+++|+++||+++++|||+++.+|||+||+++++++.++|
T Consensus 258 ~~vns~N~~~i~gq~t~~~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~~~~~~l~~~~ 337 (486)
T 1e5x_A 258 YLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLYLHY 337 (486)
T ss_dssp EEGGGSHHHHHHHHTHHHHHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEecCCCchHHHHH
Confidence 99999999999999999999999998767999999999999999999999999999998889999999999999999999
Q ss_pred hhCCcceeecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHHHhcCCeeccchHHHHHHHHHHHh
Q 009957 374 KSGWKDFKAVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTALIKLRN 453 (521)
Q Consensus 374 ~~G~~~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l~~eGi~~ePssA~alAa~~~l~~ 453 (521)
++|...+.+.....|++++|+++.|.++++.++.+++++|.++.|+|+|++++++.++++|+++||+||++++|++++.+
T Consensus 338 ~~G~~~~~~~~~~~t~a~gi~i~~p~~~~~~~~~~~~~~g~~~~Vsd~e~~~ai~l~~~eGi~~ePssA~alaa~~~~~~ 417 (486)
T 1e5x_A 338 KSGWKDFKPMTASTTFASAIQIGDPVSIDRAVYALKKCNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTALFKLRN 417 (486)
T ss_dssp HTTTTTCCC----------------CCCHHHHHHHHHTTCEEEEECHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred HcCCCccccCCCCCeeCccccCCCCccHHHHHHHHhccCCeEEEECHHHHHHHHHHHHHCCeEEChhHHHHHHHHHHHHH
Confidence 99964455656678999999999999999999889999998999999999999996588999999999999999999998
Q ss_pred cCCCCCCCeEEEEeCCCCCCchHHHHhhhcchhHHhhhhhcCCCcccCCCHHHHHHHHHHHhccc
Q 009957 454 SGVIGPLDRTVVVSTAHGLKFTQSKIDYHSKEIKDMACRFANPPVQVKADFGAVMDVLKKYLGSK 518 (521)
Q Consensus 454 ~g~i~~~~~vV~v~TG~g~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (521)
++.+.++++||+++|||+.||.+++.+++..+++++.....++...+++|+++|++.|.++++.+
T Consensus 418 ~g~~~~~~~vV~i~Tg~~~k~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 482 (486)
T 1e5x_A 418 QGVIAPTDRTVVVSTAHGLKFTQSKIDYHSNAIPDMACRFSNPPVDVKADFGAVMDVLKSYLGSN 482 (486)
T ss_dssp TTSSCTTCCEEEEECBCGGGGHHHHHHHHTTCCSSCCCTTCCCCEEEESCHHHHHHHHHHHTTCC
T ss_pred hcCCCCCCeEEEEeCCCCccCHHHHHHHhcCCCcchhhhhhccceecCCCHHHHHHHHHHHhhhc
Confidence 88788899999999999999999999987766544443444566789999999999999987654
No 2
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=100.00 E-value=2.3e-68 Score=576.78 Aligned_cols=413 Identities=22% Similarity=0.281 Sum_probs=335.6
Q ss_pred CccceeecCCCCCCCCC-CccCCCCcee-ec-CCCCcceeccccchhccCChHH-H---HHh-hhhccCCCCCCCCCccc
Q 009957 73 NTFSAKYVPFNAGPDSP-EFYSLDEIVY-RS-RSGGLLDVQHDMESLKKFDGAY-W---RDL-FDSRVGKTTWPYGSGVW 144 (521)
Q Consensus 73 ~~~~~~~v~~~~~~~cg-~~~~~~~~~~-~c-~cGGll~~~~d~~~~~~~~~~~-~---~~~-~~~~~~~~~~~~~~~iw 144 (521)
++-+|+|+ |||+|+ .+|+|+++++ .| +|||||+|. .+|.++.++ + +.+ +.+++. ..+|
T Consensus 2 ~~~~M~y~---str~~~~~~~~~~~a~l~g~a~dGGl~~p~----~~p~~~~~~~~~~~~~~s~~~~a~-------~~l~ 67 (514)
T 1kl7_A 2 PNASQVYR---STRSSSPKTISFEEAIIQGLATDGGLFIPP----TIPQVDQATLFNDWSKLSFQDLAF-------AIMR 67 (514)
T ss_dssp CCTTSCBE---ETTCCSSCCBCHHHHHHHCSCTTSCCEECS----SCCCCCHHHHHHTTTTCCHHHHHH-------HHHH
T ss_pred CCcCeEEE---ecCCCCCCccCHHHHHHhCCcCCCCeeecc----ccCCCChHHHHHHhhcCCHHHHHH-------HHHH
Confidence 56789999 999999 9999988855 57 799999984 477887654 3 332 333321 1478
Q ss_pred ccc--ccccCCCCcchhhc-----cc-ccCCcccc--ccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHH
Q 009957 145 SKK--EWVLPEIDPDDIVS-----AF-EGNSNLFW--AERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLR 214 (521)
Q Consensus 145 r~~--~~~lP~~~~~~~vs-----l~-eG~TPL~~--~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~ 214 (521)
+|. + .+|..+.+.+++ +. +|.|||++ ++++ .++|+|+|++|||||||||+++++++.+.++.
T Consensus 68 ~f~~~~-~ip~~~l~~~v~~ay~~f~~~g~TPLv~~~l~~l-------~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~ 139 (514)
T 1kl7_A 68 LYIAQE-EIPDADLKDLIKRSYSTFRSDEVTPLVQNVTGDK-------ENLHILELFHGPTYAFKDVALQFVGNLFEYFL 139 (514)
T ss_dssp TTSCTT-TSCHHHHHHHHHHHTTTCSSTTSSCEECCTTCSS-------SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHH
T ss_pred HHhCcc-cCCHHHHHHHHHHHhhccCCCCCCceeehhcccc-------cchhhhhhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 777 5 355422234566 64 89999998 6544 37999999999999999999999988776542
Q ss_pred -hcCC-------CceEEEEeCCchHHHHHHHHH--HhcCCCEEEEccCCcCCHHhHHhH---HhCCCEEEEECCCHHHHH
Q 009957 215 -KMKR-------PVVGVGCASTGDTSAALSAYC--ASAGIPSIVFLPANKISIAQLVQP---IANGAFVLSIDTDFDGCM 281 (521)
Q Consensus 215 -~~g~-------~~~~Vv~aSSGN~g~AlAa~a--a~~Gi~~~V~vP~~~~s~~k~~q~---~~~GA~Vi~v~g~~dd~~ 281 (521)
+.|. +..+|+++||||||.| |++| ++.|++|+|+||++++|+.|+.|| ..+|++|+.++|+||||+
T Consensus 140 ~~~g~~~~~~~~~~~~Iv~ATSGNtG~A-A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~g~fdda~ 218 (514)
T 1kl7_A 140 QRTNANLPEGEKKQITVVGATSGDTGSA-AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTGTFDNCQ 218 (514)
T ss_dssp HHHHTTSCSSSCCCEEEEEECSSSHHHH-HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESSCHHHHH
T ss_pred HhcCCccccccCCCCEEEECCCCcHHHH-HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcCCCHHHHH
Confidence 3331 2468999999999988 5555 999999999999987899999998 467899999999999999
Q ss_pred HHHHHHHhcC------CccccCCCChHhHhhHHHHHHHHHHhc-CC--CCCcEEEEcCCchhHHHHHHHHHHHHHHcCCC
Q 009957 282 KLIREVTSEL------PIYLANSLNSLRLEGQKTAAVEILQQF-DW--EVPDWVIVPGGNLGNIYAFYKGFKMCHELGLV 352 (521)
Q Consensus 282 ~~~~~~~~~~------~~~~~ns~Np~~i~G~~T~a~EI~eQl-~~--~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~ 352 (521)
+.+++++++. ++++.|++||.|++||+|+++|+++|+ +| +.||+||||+||||+++|+| .+++||+
T Consensus 219 ~~vk~l~~~~~~~~~~~~~~~Ns~N~~ri~gQ~tyy~e~~~ql~~~~~~~~d~~vvP~GngG~i~a~~----~ak~~G~- 293 (514)
T 1kl7_A 219 DIVKAIFGDKEFNSKHNVGAVNSINWARILAQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGY----FAKKMGL- 293 (514)
T ss_dssp HHHHHHHHCSSCC--CCBCCCCSCCHHHHHHHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHH----HHHHHTC-
T ss_pred HHHHHHHhcccccccceeEeeCCCCHhHHhhHHHHHHHHHHHHhhhcCCCCcEEEEECCchHHHHHHH----HHHHcCC-
Confidence 9999998873 567899999999999999999999999 65 46899999999999999999 5889998
Q ss_pred CCCCeEEEeccCCCchhhHHHhhCCcceee-cccccchhhhhccCCCccHHHHHHHH-----------------------
Q 009957 353 DRMPRLVCTQAANANPLYLYYKSGWKDFKA-VKASTTFASAIQIGDPVSIDRAVYAL----------------------- 408 (521)
Q Consensus 353 ~~~prli~Vq~~~~~~l~~~~~~G~~~~~~-~~~~~Tia~~i~i~~P~~~~~~l~~l----------------------- 408 (521)
|.+|||+||++| ++++++|++|. +.+ .+...|++++|+|+.|+|++++++.+
T Consensus 294 -p~~rli~v~~~n-~~l~~~~~~G~--~~~~~~~~~Tis~amdi~~psn~er~l~~l~~~~~~~~~~~~d~~~v~~~~~~ 369 (514)
T 1kl7_A 294 -PIEKLAIATNEN-DILDRFLKSGL--YERSDKVAATLSPAMDILISSNFERLLWYLAREYLANGDDLKAGEIVNNWFQE 369 (514)
T ss_dssp -CCCCEEEEECSC-CHHHHHHHHSE--EECCSSCCCCSCGGGCCSSCTTHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHH
T ss_pred -CCCEEEEEeCCc-chHHHHHhcCC--ccCCCCCCCeechhhhcCCCCcHHHHHHHHhccccccccccccHHHHHHHHHH
Confidence 789999999999 99999999995 555 55678999999999999999988655
Q ss_pred -HhcCCe---------------EEEeCHHHHHHHHHHH-Hhc----CCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEe
Q 009957 409 -KNCNGI---------------VEEATEEELMDAMAQA-DST----GMFICPHTGVALTALIKLRNSGVIGPLDRTVVVS 467 (521)
Q Consensus 409 -~~~~g~---------------~v~Vsd~Ei~~A~~~l-~~e----Gi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~ 467 (521)
++++|. ++.|+|+|++++++++ +++ |+++|||||++++|++++.++| +.+++++|+++
T Consensus 370 l~~~gg~~~~~~~~~~~~~~f~~~~Vsd~e~~~ai~~l~~~~~~~~G~~~ep~tAv~~aa~~~~~~~g-~~~~~~vV~l~ 448 (514)
T 1kl7_A 370 LKTNGKFQVDKSIIEGASKDFTSERVSNEETSETIKKIYESSVNPKHYILDPHTAVGVCATERLIAKD-NDKSIQYISLS 448 (514)
T ss_dssp HHHHSEEECCHHHHHHHTTTEEEEECCHHHHHHHHHHHHHHCCSSTTCCCCHHHHHHHHHHHHHHHHH-CCTTSEEEEEE
T ss_pred HHhcCCeeccHHHHHHhhcCceEEEECHHHHHHHHHHHHHhCCCCCCEEEcccHHHHHHHHHHHHHhc-cCCCCcEEEEE
Confidence 335554 7899999999999987 788 9999999999999999998876 56788999999
Q ss_pred CCCCCCchHHHHhhhcc---------hh-HHhhhhh--cCCCccc-CCCHHHHHHHHHHHhccc
Q 009957 468 TAHGLKFTQSKIDYHSK---------EI-KDMACRF--ANPPVQV-KADFGAVMDVLKKYLGSK 518 (521)
Q Consensus 468 TG~g~K~~~~~~~~~~~---------~~-~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~ 518 (521)
||||.||++++.+.+.. .+ +.++... ......+ ++|++++++.|.+.+..|
T Consensus 449 Ta~~~Kf~~~v~~al~~~~~~~~~~~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 512 (514)
T 1kl7_A 449 TAHPAKFADAVNNALSGFSNYSFEKDVLPEELKKLSTLKKKLKFIERADVELVKNAIEEELAKM 512 (514)
T ss_dssp CBCGGGGHHHHHHHHTTCSSCCHHHHTSCHHHHSGGGSCCCCCEECSCCHHHHHHHHHCSCSCC
T ss_pred CCchhhhHHHHHHHhCCCcccccccCCCCHHHHHHHhCccceeecCcCCHHHHHHHHHHHHHHh
Confidence 99999999999876532 22 2232222 1223467 889999999999877665
No 3
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=100.00 E-value=1.5e-63 Score=533.15 Aligned_cols=397 Identities=21% Similarity=0.312 Sum_probs=322.4
Q ss_pred cceeecCCCCCCCCCCccCCCCceeec--CCCCcceeccccchhccCChHHHHHhh----hhccCCCCCCCCCccccccc
Q 009957 75 FSAKYVPFNAGPDSPEFYSLDEIVYRS--RSGGLLDVQHDMESLKKFDGAYWRDLF----DSRVGKTTWPYGSGVWSKKE 148 (521)
Q Consensus 75 ~~~~~v~~~~~~~cg~~~~~~~~~~~c--~cGGll~~~~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~iwr~~~ 148 (521)
-+|+|+ |||+....++|+++++.+ +|||||+| +.+|+++.+.|+.|. .+++. .|. +.
T Consensus 4 ~~m~y~---str~~~~~~~f~~a~l~gla~dgGLy~P----~~~p~~~~~~~~~~~~~sy~~~a~--------~i~--~~ 66 (468)
T 4f4f_A 4 SSMKYV---STRGEAPVLGFSDALLAGLARDGGLYLP----QEYPQFTAEQIRALRGKSYVEVAL--------AVL--TP 66 (468)
T ss_dssp -CCCEE---ETTSCSCCBCHHHHHHHCSCTTSCCEEE----SSCCCCCHHHHHTTTTCCHHHHHH--------HHH--GG
T ss_pred CcceeE---ECCCCCCCCCHHHHHHhCCCCCCceEcC----ccCCCCCHHHHHHHhCCCHHHHHH--------HHH--HH
Confidence 469999 999999999999999986 89999987 789999877665542 22322 233 23
Q ss_pred cccCCCCcchhhcccccC---------CccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHH-HhcCC
Q 009957 149 WVLPEIDPDDIVSAFEGN---------SNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRL-RKMKR 218 (521)
Q Consensus 149 ~~lP~~~~~~~vsl~eG~---------TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~-~~~g~ 218 (521)
|+-.+++++++..+.+.. |||+++. +++|+|+|++||||||||||++++++.+.++ .+.|.
T Consensus 67 f~~~~i~~~~l~~~~~~ay~~F~~~~~~pl~~l~---------~~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~ 137 (468)
T 4f4f_A 67 FTGGEIPAADFERMVREAYGTFRHDAVCPLVQTD---------ANEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE 137 (468)
T ss_dssp GGTTCSCHHHHHHHHHHHHHTSSSTTSSCEEEEE---------TTEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HhcCCCCHHHHHHHHHHHHhcCCCCCCCceEEec---------CCeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC
Confidence 333577778877776543 5555421 2699999999999999999999997766554 34554
Q ss_pred CceEEEEeCCchHH-HHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCC---EEEEECCCHHHHHHHHHHHHhcC---
Q 009957 219 PVVGVGCASTGDTS-AALSAYCASAGIPSIVFLPANKISIAQLVQPIANGA---FVLSIDTDFDGCMKLIREVTSEL--- 291 (521)
Q Consensus 219 ~~~~Vv~aSSGN~g-~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA---~Vi~v~g~~dd~~~~~~~~~~~~--- 291 (521)
+ .+|+++|||||| +++++||++.|++++|+||++++|+.|+.||+.+|+ +|+.++|+||||++.+++++++.
T Consensus 138 ~-~~Vv~ASSGNtG~aa~aa~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~gganV~vv~v~g~fdda~~~~k~~~~d~~~~ 216 (468)
T 4f4f_A 138 R-ATIVGATSGDTGGAAIEAFGGRDNTDIFILFPNGRVSPVQQRQMTSSGFSNVHALSIEGNFDDCQNLVKGMFNDLEFC 216 (468)
T ss_dssp C-EEEEEECSSHHHHHHHHHHTTCSSEEEEEEEETTCSCHHHHHHHHCSCCTTEEEEEEESCHHHHHHHHHHHHHCHHHH
T ss_pred C-cEEEEECCchHHHHHHHHHHhccCCcEEEEeCCCCCCHHHHHHHHhcCCCeEEEeecCCCHHHHHHHHHHHHhccccc
Confidence 2 579999999999 667899999999999999998789999999999974 56889999999999999998764
Q ss_pred ---CccccCCCChHhHhhHHHHHHHHHHhcCCCCCcE---EEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCC
Q 009957 292 ---PIYLANSLNSLRLEGQKTAAVEILQQFDWEVPDW---VIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAAN 365 (521)
Q Consensus 292 ---~~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pD~---VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~ 365 (521)
+++.+|++||.+++||+|+++||++|++ .||. |+||+||||+++|++. +++||+ |+.|||+| +.+
T Consensus 217 ~~~~~~~vnsin~~ri~GQ~T~~~Ei~~ql~--~~d~~v~vvVPvG~GG~i~g~~~----Ak~mGl--Pi~kli~a-~n~ 287 (468)
T 4f4f_A 217 DALSLSGVNSINWARIMPQVVYYFTAALSLG--APDRAVSFTVPTGNFGDIFAGYV----AKRMGL--PIEQLIIA-TND 287 (468)
T ss_dssp HHHTEEECCTTSHHHHGGGHHHHHHHHHHTT--TTSSCEEEEEECSSSHHHHHHHH----HHHHTC--CEEEEEEE-ECS
T ss_pred cccceEeCCCCCHHHHHhHHHHHHHHHHhcc--cCCCCeEEEEEeCCcHHHHHHHH----HHHhCC--CCCEEEEE-eCC
Confidence 5788999999999999999999999998 6888 9999999999999994 578998 67899999 777
Q ss_pred CchhhHHHhhCCcceeecccccchhhhhccCCCccHHHHHHHH---------------HhcCCe---------------E
Q 009957 366 ANPLYLYYKSGWKDFKAVKASTTFASAIQIGDPVSIDRAVYAL---------------KNCNGI---------------V 415 (521)
Q Consensus 366 ~~~l~~~~~~G~~~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l---------------~~~~g~---------------~ 415 (521)
+++++++|++|. +.+.+...|++++|+|+.|+|++|.++.+ +++++. .
T Consensus 288 ~~~l~~~l~~G~--~~~~~~~~Tia~smdi~~~sN~erl~~~l~~~d~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 365 (468)
T 4f4f_A 288 NDILSRTLESGA--YEMRGVAQTTSPSMDIQISSNFERLLFEAHGRDAAAVRGLMQGLKQSGGFTISEKPLSAIRSEFSA 365 (468)
T ss_dssp CCHHHHHHHHSE--EECCCCCCCSCGGGCCSSCTTHHHHHHHHTTTCHHHHHHHHHHHHHHSEEECCHHHHHHHHHHEEE
T ss_pred chHHHHHHHcCC--ceecCCcceeCchhhcCccchHHHHHHHHhccCHHHHHHHHHHHHhcCCeeccHHHHHHHhhcceE
Confidence 799999999995 45556678999999999999999876433 233333 6
Q ss_pred EEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCchHHHHhhhcch------hHH
Q 009957 416 EEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLKFTQSKIDYHSKE------IKD 488 (521)
Q Consensus 416 v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K~~~~~~~~~~~~------~~~ 488 (521)
+.|+|+|+.++|+++ +++|+++|||||++++|++++. .+++++|+++||||+||++++.+..... +.+
T Consensus 366 ~~VsD~ei~~ai~~l~~~~g~~vEP~~Ava~aa~~~~~-----~~~~~~V~l~Ta~~~Kf~~~v~~a~~~~~~~p~~l~~ 440 (468)
T 4f4f_A 366 GRSTVDETAATIESVLSKDGYLLDPHSAIGVKVAREKA-----SGTAPMVVLATAHPAKFPDAVKAACGVEPQLPAWLCD 440 (468)
T ss_dssp EECCHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHC-----CSSSCEEEEECBCGGGSHHHHHHHHSCCCCCCGGGTT
T ss_pred EEECHHHHHHHHHHHHHHCCEEECHhHHHHHHHHHHHh-----CCCCeEEEEecCCccccHHHHHHHhCCCCCCChHHHH
Confidence 799999999999986 8899999999999999999874 2577999999999999999998865322 222
Q ss_pred hhhhhcCCCcccCCCHHHHHHHHHHHh
Q 009957 489 MACRFANPPVQVKADFGAVMDVLKKYL 515 (521)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (521)
+... ......+++|+++++++|.++.
T Consensus 441 l~~~-~~~~~~~~~~~~~~~~~i~~~~ 466 (468)
T 4f4f_A 441 LMQR-KESFTVLHNELKIVEEYVRHHS 466 (468)
T ss_dssp GGGS-CCCCEEEESCHHHHHHHHHHHC
T ss_pred HhcC-ccceeeCCCCHHHHHHHHHHHh
Confidence 2211 1223478899999999998765
No 4
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=100.00 E-value=1.5e-63 Score=533.65 Aligned_cols=405 Identities=19% Similarity=0.250 Sum_probs=305.7
Q ss_pred ceeecCCCCCCCCC--CccCCCCceeec--CCCCcceeccccchhccCChHHHHHhh----hhccCCCCCCCCCcccccc
Q 009957 76 SAKYVPFNAGPDSP--EFYSLDEIVYRS--RSGGLLDVQHDMESLKKFDGAYWRDLF----DSRVGKTTWPYGSGVWSKK 147 (521)
Q Consensus 76 ~~~~v~~~~~~~cg--~~~~~~~~~~~c--~cGGll~~~~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~iwr~~ 147 (521)
||+|+ |||+.. ..++|+++++.+ +|||||+| +.+|+++.+.|+.|. .+++. .|. +
T Consensus 4 ~M~y~---STR~~~~~~~~~f~~a~l~Gla~DgGLyvP----~~~P~~~~~~~~~~~~~sy~ela~--------~il--~ 66 (487)
T 3v7n_A 4 SMNYI---STRGAGIGERHTFSDILLGGLAKDGGLYLP----SEYPQVSADELARWRTLPYADLAF--------EIL--S 66 (487)
T ss_dssp --CEE---ETTSTTTTSCCCHHHHTTCCCCTTSCCEEE----SSCCCCCHHHHHHHTTCCHHHHHH--------HHH--H
T ss_pred cceEE---ECCCCCCCCCCCHHHHHHhCCCCCCceEcC----ccCCCCCHHHHHHHhCCCHHHHHH--------HHH--H
Confidence 69999 999988 789999999986 89999987 789999877666543 22221 333 3
Q ss_pred ccccCCCCcchhhcccccCCcc--ccc-------cccccccCCC-C--c--EEEecCCCCCCCChhHHHHHHHHHHHHHH
Q 009957 148 EWVLPEIDPDDIVSAFEGNSNL--FWA-------ERFGKQFLGM-N--D--LWVKHCGISHTGSFKDLGMTVLVSQVNRL 213 (521)
Q Consensus 148 ~~~lP~~~~~~~vsl~eG~TPL--~~~-------~~l~~~~lg~-~--~--l~vK~E~~nPTGSfKDRga~~~v~~a~~~ 213 (521)
.|+ .+++++++..+.+..+.- |.. +.+.+. ..+ + + +|+|+|++||||||||||++++...+.++
T Consensus 67 ~f~-~~i~~~~l~~~i~~ay~~~~F~~~~~~~~~~~i~Pl-~~l~~~~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a 144 (487)
T 3v7n_A 67 KFC-DDIAAADLRAITRRTYTADVYRHARRGGNAADITPL-TTLGTENGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYT 144 (487)
T ss_dssp HHC-SSSCHHHHHHHHHHHSCTTTTCCCCSSCCGGGSSCE-EEEEEETTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHH
T ss_pred HHh-ccCCHHHHHHHHHHHhCcccCCCcccccccccCcee-EEecCCCCcceeHHhhccCCcCcHHHHHHHHHHHHHHHH
Confidence 333 677778877776643221 221 111110 111 1 3 99999999999999999999985555554
Q ss_pred -HhcCCCceEEEEeCCchHHHHHHHHHH-hcCCCEEEEccCCcCCHHhHHhHHhCCC---EEEEECCCHHHHHHHHHHHH
Q 009957 214 -RKMKRPVVGVGCASTGDTSAALSAYCA-SAGIPSIVFLPANKISIAQLVQPIANGA---FVLSIDTDFDGCMKLIREVT 288 (521)
Q Consensus 214 -~~~g~~~~~Vv~aSSGN~g~AlAa~aa-~~Gi~~~V~vP~~~~s~~k~~q~~~~GA---~Vi~v~g~~dd~~~~~~~~~ 288 (521)
.+.|.+ .+|+++||||||.|+++.++ +.|++|+|+||++++|+.|+.||+.+|+ +|+.|+|+||||++.+++++
T Consensus 145 ~~~~g~~-~~Vv~ASSGNtG~Aaa~a~~~~~Gi~~~I~~P~~~~s~~k~~qm~~~Ga~nv~vv~v~G~fDda~~~vk~~~ 223 (487)
T 3v7n_A 145 LAKHGET-LNILGATSGDTGSAAEYAMRGKEGVRVFMLSPHKKMSAFQTAQMYSLQDPNIFNLAVNGVFDDCQDIVKAVS 223 (487)
T ss_dssp HHTTTCC-EEEEEECSSHHHHHHHHHHTTCTTEEEEEEEETTCSCHHHHHHHHTCCCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHhcCCC-cEEEEeCChHHHHHHHHHHHhccCCeEEEEECCCCCCHHHHHHHHhcCCCcEEEEEECCCHHHHHHHHHHhh
Confidence 344543 46999999999988554443 8999999999998789999999999997 89999999999999999998
Q ss_pred hc------CCccccCCCChHhHhhHHHHHHHHHHhcC--CCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEE
Q 009957 289 SE------LPIYLANSLNSLRLEGQKTAAVEILQQFD--WEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVC 360 (521)
Q Consensus 289 ~~------~~~~~~ns~Np~~i~G~~T~a~EI~eQl~--~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~ 360 (521)
++ .+++++|++||+|++||+|+++|++.|+. |..||+|+||+||||+++|++ .+++||+ |++|||+
T Consensus 224 ~d~~~~~~~~l~~vns~Np~ri~gQ~tyy~~~~~el~~~~~~~d~vvVP~GngG~i~g~~----~A~~mGl--p~~rli~ 297 (487)
T 3v7n_A 224 NDHAFKAQQKIGTVNSINWARVVAQVVYYFKGYFAATRSNDERVSFTVPSGNFGNVCAGH----IARMMGL--PIEKLVV 297 (487)
T ss_dssp TCHHHHHHTTEECCSTTCHHHHHHHHHHHHHHHHHTCSSTTCCEEEEEGGGCHHHHHHHH----HHHHTTC--CEEEEEE
T ss_pred hchHHHhhcCeeeeCCCCHHHHHhHHHHHHHHHHHHHhcCCCCcEEEEecCchHHHHHHH----HHHHcCC--CCceEEE
Confidence 73 57889999999999999999999999985 357999999999999999999 4678998 6889999
Q ss_pred eccCCCchhhHHHhhCCcceeecccccch---hhhhccCCCccHHHHHHHHH---------------hcCC---------
Q 009957 361 TQAANANPLYLYYKSGWKDFKAVKASTTF---ASAIQIGDPVSIDRAVYALK---------------NCNG--------- 413 (521)
Q Consensus 361 Vq~~~~~~l~~~~~~G~~~~~~~~~~~Ti---a~~i~i~~P~~~~~~l~~l~---------------~~~g--------- 413 (521)
||++| ++++++|++|. +.+.+..+|+ +++|+|+.|+|++|+++.+. ++++
T Consensus 298 a~~~n-~~l~~~~~~G~--~~~~~~~~Ti~t~s~smdI~~psn~er~l~~l~~~d~~~~~~~m~~l~~~g~~~l~~~~~~ 374 (487)
T 3v7n_A 298 ATNEN-DVLDEFFRTGA--YRVRSAQDTYHTSSPSMDISKASNFERFVFDLLGRDPARVVQLFRDVEQKGGFDLAASGDF 374 (487)
T ss_dssp ECTTC-HHHHHHHHHSE--EEC------------------CHHHHHHHHHHTTTCHHHHHHHHHHHHHHSEEETTTTTCT
T ss_pred EeCCC-cHHHHHHHcCC--cccCCCCCccccCCchhccCCCccHHHHHHHHhCCCHHHHHHHHHHHHhcCCeecccchhH
Confidence 99999 99999999995 4555566788 99999999999999977653 2222
Q ss_pred --------eEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCchHHHHhhhcc
Q 009957 414 --------IVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLKFTQSKIDYHSK 484 (521)
Q Consensus 414 --------~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K~~~~~~~~~~~ 484 (521)
..+.|+|+|++++++++ +++|+++|||||++++++.++++ ++.++|+++||||+||++++.+....
T Consensus 375 ~~~~~~~~~~~~VsDee~~~air~l~~~~G~l~dPhtAva~aaa~~~~~-----~~~~~V~l~Ta~p~Kf~~~v~~a~~~ 449 (487)
T 3v7n_A 375 ARVAEFGFVSGRSTHADRIATIRDVFERYRTMIDTHTADGLKVAREHLR-----PGVPMVVLETAQPIKFGESIREALGQ 449 (487)
T ss_dssp HHHHHTTEEEECCCHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHTTSCC-----TTSCEEEEECBCGGGGHHHHHHHHSS
T ss_pred HHHHhhcceEEEECHHHHHHHHHHHHHHcCEEEChhHHHHHHHHHHhhC-----CCCcEEEEecCCccccHHHHHHHhCC
Confidence 24689999999999986 88999999999999999887653 46789999999999999999876432
Q ss_pred h------hHHhhhhhcCCCcccCCCHHHHHHHHHHHh
Q 009957 485 E------IKDMACRFANPPVQVKADFGAVMDVLKKYL 515 (521)
Q Consensus 485 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (521)
. +.++.... ..-..+++|+++++++|.++.
T Consensus 450 ~~~~P~~l~~l~~~~-~~~~~~~~~~~~~~~~i~~~~ 485 (487)
T 3v7n_A 450 EPSRPAAFDGLEALP-QRFEVVDANAQQVKDFIAAHT 485 (487)
T ss_dssp CCCCCGGGTTGGGSC-CCCEEEESCHHHHHHHHHTTS
T ss_pred CCCCChHHHHHhcCc-ceeeecCCCHHHHHHHHHHHh
Confidence 2 22222111 123478899999999988754
No 5
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=7.9e-61 Score=497.77 Aligned_cols=343 Identities=35% Similarity=0.556 Sum_probs=301.8
Q ss_pred CccccccccccCCCCcchhhcccccCCccccc--cccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCC
Q 009957 141 SGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWA--ERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR 218 (521)
Q Consensus 141 ~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~--~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~ 218 (521)
.+||||++| ||..+....+++++|+|||+++ +++++. +|. +||+|+|++|||||||||++.+++..+. +.|
T Consensus 4 ~~~~ry~~~-lp~~~~~~~v~~~~g~TPL~~~~~~~l~~~-~g~-~v~~K~E~~~ptgS~KdR~a~~~l~~a~---~~g- 76 (351)
T 3aey_A 4 PLIERYRNL-LPVSEKTPVISLLEGSTPLIPLKGPEEARK-KGI-RLYAKYEGLNPTGSFKDRGMTLAVSKAV---EGG- 76 (351)
T ss_dssp CHHHHTGGG-TTCCTTSCCCCSCCCCCCEEECCCCHHHHT-TTC-EEEEEEGGGSTTSBTTHHHHHHHHHHHH---HTT-
T ss_pred CcccccHhh-CCCcccCCceecCCCCCCeeecCchhhHHH-hCC-eEEEEecCCCCcccHHHHHHHHHHHHHH---hcC-
Confidence 589999995 7854334568999999999999 888776 675 7999999999999999999999988764 334
Q ss_pred CceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCC
Q 009957 219 PVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANS 298 (521)
Q Consensus 219 ~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns 298 (521)
..+|+++||||||.|+|++|++.|++|+|+||++.++..|+.+++.+||+|+.++++++++++.+++++++.+++++|+
T Consensus 77 -~~~vv~~SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~~~~~~~~~a~~l~~~~~~~~~~~ 155 (351)
T 3aey_A 77 -AQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNFDDALRLTQKLTEAFPVALVNS 155 (351)
T ss_dssp -CSEEEESCSSHHHHHHHHHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEECST
T ss_pred -CCEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhcCcEecCC
Confidence 4689999999999999999999999999999997578999999999999999999999999999999999888888999
Q ss_pred CChHhHhhHHHHHHHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCc
Q 009957 299 LNSLRLEGQKTAAVEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWK 378 (521)
Q Consensus 299 ~Np~~i~G~~T~a~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~ 378 (521)
.||.+++||+|+++||++|++ ..||+||+|+|+||+++|++++|+++..+|++++.+|||+||+++++++. .|.
T Consensus 156 ~n~~~~~g~~t~~~Ei~~q~~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~----~g~- 229 (351)
T 3aey_A 156 VNPHRLEGQKTLAFEVVDELG-DAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLV----LGR- 229 (351)
T ss_dssp TCHHHHHHHHHHHHHHHHHHS-SCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGGGCHHH----HTS-
T ss_pred CCccceeeeeeHHHHHHHHcC-CCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEecCCCChhh----cCc-
Confidence 999999999999999999997 46899999999999999999999999999998778899999999987764 342
Q ss_pred ceeecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCC
Q 009957 379 DFKAVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVI 457 (521)
Q Consensus 379 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i 457 (521)
+....+|++++|+++.|.++++.+..++++.+.++.|+|+|++++++++ +++|+++||+||++++|++++.+++.+
T Consensus 230 ---~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~ 306 (351)
T 3aey_A 230 ---PVERPETLATAIRIGNPASWQGAVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAGVFKLLREGRL 306 (351)
T ss_dssp ---CCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHTCCCBCHHHHHHHHHHHHHHHTTCS
T ss_pred ---ccCCccchhHhhcCCCCCCHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCEEECchHHHHHHHHHHHHHhcCC
Confidence 1223468999999988888888888888899999999999999999997 789999999999999999999888777
Q ss_pred CCCCeEEEEeCCCCCCchHHHHhhhcchhHHhhhhhcCCCcccCCCHHHHHHHHH
Q 009957 458 GPLDRTVVVSTAHGLKFTQSKIDYHSKEIKDMACRFANPPVQVKADFGAVMDVLK 512 (521)
Q Consensus 458 ~~~~~vV~v~TG~g~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (521)
.++++||+++||+|.||.+++.+.+ ..+..++++++.+.+.++
T Consensus 307 ~~~~~vv~i~tg~~~k~~~~~~~~~------------~~~~~~~~~~~~~~~~~~ 349 (351)
T 3aey_A 307 EPESTVVLTLTGHGLKDPATAERVA------------ELPPPVPARLEAVAAAAG 349 (351)
T ss_dssp CTTCEEEEEECBBGGGCHHHHCSCC------------CCCCCEESCHHHHHHHHT
T ss_pred CCCCeEEEEECCCCCCCHHHHHHhc------------CCCCCCCCCHHHHHHHHh
Confidence 7899999999999999999874332 233467899998887643
No 6
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=1.6e-60 Score=495.67 Aligned_cols=343 Identities=35% Similarity=0.595 Sum_probs=301.5
Q ss_pred CCccccccccccCCCCcchhhcccccCCccccccccccccCCCCc-EEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCC
Q 009957 140 GSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMND-LWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR 218 (521)
Q Consensus 140 ~~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~~~l~~~~lg~~~-l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~ 218 (521)
.+++|||++| ||..+....+++++|+|||++++++++. +|.++ ||+|+|++|||||||||++.+++..+. +.|
T Consensus 5 ~~~~~ry~~~-lp~~~~~~~v~~~~g~TPL~~~~~l~~~-~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~---~~g- 78 (352)
T 2zsj_A 5 QGIIKQYKKY-LPVDENTPIVTLYEGNTPLIEADNLARA-IGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAV---EAG- 78 (352)
T ss_dssp CCHHHHSGGG-SSCCTTCCCCCCCCCCCCEEECHHHHHH-HTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHH---HTT-
T ss_pred cccceeeHhh-CCCccCCCceecccCCCCCeehHHHHHH-hCCCceEEEEECCCCCCccHHHHHHHHHHHHHH---hcC-
Confidence 3589999995 8864334568999999999999998876 67633 999999999999999999999988764 344
Q ss_pred CceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCC
Q 009957 219 PVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANS 298 (521)
Q Consensus 219 ~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns 298 (521)
..+|+++||||||.|+|++|++.|++|+|+||++.++..|+.+++.+||+|+.++++++++.+.+++++++.+++++|+
T Consensus 79 -~~~vv~~SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~~~~~~~~a~~l~~~~~~~~~~~ 157 (352)
T 2zsj_A 79 -KRAVICASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQGTFDDALNIVRKIGENFPVEIVNS 157 (352)
T ss_dssp -CCEEEECCSSHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESSCHHHHHHHHHHHHHHSSEEECST
T ss_pred -CCEEEEeCCchHHHHHHHHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHHcCcEECCC
Confidence 4689999999999999999999999999999996578999999999999999999999999999999999888888999
Q ss_pred CChHhHhhHHHHHHHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCc
Q 009957 299 LNSLRLEGQKTAAVEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWK 378 (521)
Q Consensus 299 ~Np~~i~G~~T~a~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~ 378 (521)
.||.+++||+|+++||++|++ ..||+||+|+|+||+++|++++|+++..+|++++.+|||+||+++++++. .|.
T Consensus 158 ~n~~~~~g~~t~~~Ei~~q~~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~----~g~- 231 (352)
T 2zsj_A 158 VNPYRIEGQKTAAFEICDTLG-EAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIV----KGY- 231 (352)
T ss_dssp TCTHHHHHHTHHHHHHHHHHS-SCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEETTBCHHH----HTS-
T ss_pred CCcchhhhHhHHHHHHHHHcC-CCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCcHHh----cCC-
Confidence 999999999999999999997 46899999999999999999999999999998778999999999987764 342
Q ss_pred ceeecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCC
Q 009957 379 DFKAVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVI 457 (521)
Q Consensus 379 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i 457 (521)
+....+|++++|+++.|.++++.+..++++.+.++.|+|+|++++++++ +++|+++||+||++++|++++.+++.+
T Consensus 232 ---~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~ 308 (352)
T 2zsj_A 232 ---PIKNPQTIATAIKIGNPYSWKSALKAAQESGGKIDAVSDSEILYAYKLIASTEGVFCEPASAASVAGLIKLVREGFF 308 (352)
T ss_dssp ---CCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHTTCC
T ss_pred ---ccCCCcchhHHhcCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCeeECchHHHHHHHHHHHHHhCCC
Confidence 1223468999999988888888888888889999999999999999997 789999999999999999999888777
Q ss_pred CCCCeEEEEeCCCCCCchHHHHhhhcchhHHhhhhhcCCCcccCCCHHHHHHH
Q 009957 458 GPLDRTVVVSTAHGLKFTQSKIDYHSKEIKDMACRFANPPVQVKADFGAVMDV 510 (521)
Q Consensus 458 ~~~~~vV~v~TG~g~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
.++++||+++||+|.||.+++.+.. +.+..++++++.+.+.
T Consensus 309 ~~~~~vv~i~tg~~~k~~~~~~~~~------------~~~~~~~~~~~~~~~~ 349 (352)
T 2zsj_A 309 KGGEVVTCTLTGNGLKDPDTAIKVC------------EEPITVPPDFDEVVKV 349 (352)
T ss_dssp CSCCEEEEEECBBGGGCHHHHHHHC------------CCCEEECSCHHHHHHH
T ss_pred CCCCeEEEEeCCCCccChHHHHHhc------------cCCCCCCCCHHHHHHh
Confidence 7899999999999999999884332 3345678899888774
No 7
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-60 Score=495.69 Aligned_cols=342 Identities=37% Similarity=0.560 Sum_probs=300.4
Q ss_pred CCccccccccccCCCCcchhhcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCC
Q 009957 140 GSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRP 219 (521)
Q Consensus 140 ~~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~ 219 (521)
..++|||+++ ||..+....+++++|+|||++++++++. +|. +||+|+|++|||||||||++.+++..+. +.|
T Consensus 13 ~~~~~ry~~~-lp~~~~~~~v~~~~g~TPL~~~~~l~~~-~g~-~i~~K~E~~~ptgSfKdR~a~~~l~~a~---~~g-- 84 (360)
T 2d1f_A 13 PGVIAAYRDR-LPVGDDWTPVTLLEGGTPLIAATNLSKQ-TGC-TIHLKVEGLNPTGSFKDRGMTMAVTDAL---AHG-- 84 (360)
T ss_dssp CCHHHHTGGG-SCCCSSCCCCCCCCCCCCEEECHHHHHH-HSS-EEEEEEGGGSTTSBTTHHHHHHHHHHHH---HTT--
T ss_pred ccchhhhHHh-CCCcccCCccccccCCCCCeechhhHHH-hCC-eEEEEECCCCCCcCHHHHHHHHHHHHHH---HCC--
Confidence 4689999995 7854333568999999999999998876 675 7999999999999999999999988764 334
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC-ccccCC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP-IYLANS 298 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~-~~~~ns 298 (521)
..+|+++||||||.|+|++|++.|++|+|+||++.++..|+.+++.+||+|+.++++|+++++.+++++++.+ ++++|+
T Consensus 85 ~~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~~~~~~~~a~~l~~~~~~~~~i~~ 164 (360)
T 2d1f_A 85 QRAVLCASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDGNFDDCLELARKMAADFPTISLVNS 164 (360)
T ss_dssp CSEEEECCSSHHHHHHHHHHHHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSSCHHHHHHHHHHHHHHCTTEEECST
T ss_pred CCEEEEeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhcCCeEEcCC
Confidence 4689999999999999999999999999999997579999999999999999999999999999999998877 788899
Q ss_pred CChHhHhhHHHHHHHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCc
Q 009957 299 LNSLRLEGQKTAAVEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWK 378 (521)
Q Consensus 299 ~Np~~i~G~~T~a~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~ 378 (521)
.||.+++||+|+++||++|++ ..||+||+|+|+||+++|++++|+++..+|++++.+|||+||+++++++. .|.
T Consensus 165 ~n~~~~~g~~t~~~Ei~~q~~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~----~g~- 238 (360)
T 2d1f_A 165 VNPVRIEGQKTAAFEIVDVLG-TAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLV----LGE- 238 (360)
T ss_dssp TCHHHHHHHTHHHHHHHHHHS-SCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCHHH----HSS-
T ss_pred CChhhhhhHHHHHHHHHHHcC-CCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEecCCCCHHh----cCC-
Confidence 999999999999999999997 46899999999999999999999999999998778899999999987764 342
Q ss_pred ceeecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCC
Q 009957 379 DFKAVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVI 457 (521)
Q Consensus 379 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i 457 (521)
+....+|++++|+++.|.++++.+..++++.+.++.|+|+|+++++++| +++|+++||+||++++|++++.+++.+
T Consensus 239 ---~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~eGi~~epssa~alaa~~~~~~~~~~ 315 (360)
T 2d1f_A 239 ---PVSHPETIATAIRIGSPASWTSAVEAQQQSKGRFLAASDEEILAAYHLVARVEGVFVEPASAASIAGLLKAIDDGWV 315 (360)
T ss_dssp ---CCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHTSS
T ss_pred ---ccCCccchHHHhCCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhcCeeECchHHHHHHHHHHHHHhCCC
Confidence 1223468999999998888888888888899999999999999999997 789999999999999999999887777
Q ss_pred CCCCeEEEEeCCCCCCchHHHHhhhcchhHHhhhhhcCCCcccCCCHHHHHHH
Q 009957 458 GPLDRTVVVSTAHGLKFTQSKIDYHSKEIKDMACRFANPPVQVKADFGAVMDV 510 (521)
Q Consensus 458 ~~~~~vV~v~TG~g~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (521)
.++++||+++||+|.||++++.+++ ..+..++++++++.+.
T Consensus 316 ~~~~~vv~i~tg~~~k~~~~~~~~~------------~~~~~~~~~~~~~~~~ 356 (360)
T 2d1f_A 316 ARGSTVVCTVTGNGLKDPDTALKDM------------PSVSPVPVDPVAVVEK 356 (360)
T ss_dssp CTTCEEEEEECBBGGGCHHHHHSSC------------CCCCCBCSCHHHHHHT
T ss_pred CCCCeEEEEeCCCCcCCHHHHHHhc------------cCCCCCCccHHHHHHH
Confidence 7889999999999999999985433 2334678898887764
No 8
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=2.8e-61 Score=513.35 Aligned_cols=398 Identities=23% Similarity=0.272 Sum_probs=324.2
Q ss_pred eeecCCCCCCCCCCccCCCCceeec--CCCCcceeccccchhccCChHHHHHhhhhccCCCCCCCCC-ccccccccccCC
Q 009957 77 AKYVPFNAGPDSPEFYSLDEIVYRS--RSGGLLDVQHDMESLKKFDGAYWRDLFDSRVGKTTWPYGS-GVWSKKEWVLPE 153 (521)
Q Consensus 77 ~~~v~~~~~~~cg~~~~~~~~~~~c--~cGGll~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~iwr~~~~~lP~ 153 (521)
|+|+ |||+....++|++++++| +|||+|+| +.+|.++.++|+.|.+. +|.. ..+.++.|+.++
T Consensus 1 m~y~---str~~~~~~~~~~a~~~gl~~~GGl~vp----~~~p~~~~~~~~~~~~~-------~y~~~a~~i~~~f~~~~ 66 (428)
T 1vb3_A 1 MKLY---NLKDHNEQVSFAQAVTQGLGKNQGLFFP----HDLPEFSLTEIDEMLKL-------DFVTRSAKILSAFIGDE 66 (428)
T ss_dssp CCEE---ETTEEEEEECHHHHHHHCSBGGGBCEEE----SSCCCCCHHHHHHHTTS-------CHHHHHHHHHHHHHGGG
T ss_pred Ccce---eCCCCCCCcCHHHHHHccCCCCCcEEec----cccCCCCHHHHHHHhCC-------CHHHHHHHHHHHHhcCC
Confidence 8999 999877889999999999 79999987 67899988777765432 1211 122235655457
Q ss_pred CCcchhhccc----ccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCc
Q 009957 154 IDPDDIVSAF----EGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTG 229 (521)
Q Consensus 154 ~~~~~~vsl~----eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSG 229 (521)
++++++..+. .+.|||+++++ ++|+|++++|||||||||++.++++.+.++ +.+ +..+|+++|||
T Consensus 67 ~~~~~l~~~~~~~~~~~TPL~~l~~---------~i~~~E~~~~pTgSfKdr~a~~l~~~l~~a-~~~-~~~~Iv~atsG 135 (428)
T 1vb3_A 67 IPQEILEERVRAAFAFPAPVANVES---------DVGCLELFHGPTLAFKDFGGRFMAQMLTHI-AGD-KPVTILTATSG 135 (428)
T ss_dssp SCHHHHHHHHHHHCCSCCCEEEEET---------TEEEEECCCSTTSBTHHHHHHHHHHHHHHH-TTT-CCEEEEEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCeEEecC---------CeEEeeccCCCcccHHHHHHHHHHHHHHHH-Hhc-CCCEEEecCCc
Confidence 7767664432 47899998652 699977777899999999999987666554 234 35789999999
Q ss_pred hHHHHHH-HHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEE--EEECCCHHHHHHHHHHHHhc------CCccccCCCC
Q 009957 230 DTSAALS-AYCASAGIPSIVFLPANKISIAQLVQPIANGAFV--LSIDTDFDGCMKLIREVTSE------LPIYLANSLN 300 (521)
Q Consensus 230 N~g~AlA-a~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~V--i~v~g~~dd~~~~~~~~~~~------~~~~~~ns~N 300 (521)
|||.|+| ++|++.|++|+||||+++++..|+.||+.+||+| +.++|+||+|++.+++++++ .+++.+|++|
T Consensus 136 NtG~A~A~~~a~~~G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~v~g~~d~~~~~~~~~~~d~~~~~~~~~~~~n~~n 215 (428)
T 1vb3_A 136 DTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSIN 215 (428)
T ss_dssp SHHHHHHHHTTTCTTEEEEEEEETTCSCHHHHHHHHSCCTTEEEEEEESCHHHHHHHHHHGGGCHHHHHHHTEECCSTTS
T ss_pred hHHHHHHHHHhhhcCCeEEEEECCCCCCHHHHHHHHhcCCeEEEEEeCCCHHHHHHHHHHHHhchhhhhhcCeeeCCCCC
Confidence 9999999 6999999999999999668999999999999998 99999999999999998864 5788899999
Q ss_pred hHhHhhHHHHHHHHHHhcCCC--CCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCc
Q 009957 301 SLRLEGQKTAAVEILQQFDWE--VPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWK 378 (521)
Q Consensus 301 p~~i~G~~T~a~EI~eQl~~~--~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~ 378 (521)
|++++||+|+++||++|+++. .||+||||+|+||+++|++.++ ++|+ |.+|||+|+++| +.+++++++|.
T Consensus 216 ~~~~~gq~t~~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~~a~----~~g~--p~~kii~a~~~~-~~l~~~~~~G~- 287 (428)
T 1vb3_A 216 ISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAK----SLGL--PVKRFIAATNVN-DTVPRFLHDGQ- 287 (428)
T ss_dssp HHHHHHTTHHHHHHHTTSCTTTTTSEEEEEECSSCHHHHHHHHHH----HTTC--CCSEEEEEECSC-CHHHHHHHHSC-
T ss_pred HHHHHHHHHHHHHHHHHcccccCCCCEEEEeCCchHHHHHHHHHH----HcCC--CCCeEEeecCCC-hHHHHHHHcCC-
Confidence 999999999999999999863 6999999999999999999764 5776 678999999776 57889999995
Q ss_pred ceeecccccchhhhhccCCCccHHHHHHHHHhc-----CCeEEEeCHHHHHHHHHHHHhcCCeeccchHHHHHHHHHHHh
Q 009957 379 DFKAVKASTTFASAIQIGDPVSIDRAVYALKNC-----NGIVEEATEEELMDAMAQADSTGMFICPHTGVALTALIKLRN 453 (521)
Q Consensus 379 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~-----~g~~v~Vsd~Ei~~A~~~l~~eGi~~ePssA~alAa~~~l~~ 453 (521)
+.+....+|++++|+++.|+++++.++++++. .+.++.|+|+|+++++++++++|+++||+||++++|++++.+
T Consensus 288 -~~~~~~~~tis~g~~i~~p~~~~~~~~l~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~eGi~~~p~sa~a~aa~~~~~~ 366 (428)
T 1vb3_A 288 -WSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLN 366 (428)
T ss_dssp -CCCCCCCCCSSGGGCCSSCTTHHHHHHHHHHTTCCGGGSEEEECCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTTCC
T ss_pred -cccCCCCCcccchhcCCCCccHHHHHHHHhcchhhhhCcEEEEECHHHHHHHHHHHHHCCeEECchHHHHHHHHHHHhC
Confidence 44555568999999999999999988777766 678999999999999998877899999999999999988653
Q ss_pred cCCCCCCCeEEEEeCCCCCCchHHHHhhhcch--h-HHhhhhhc--CCCcccCCCHHHHHHHHHH
Q 009957 454 SGVIGPLDRTVVVSTAHGLKFTQSKIDYHSKE--I-KDMACRFA--NPPVQVKADFGAVMDVLKK 513 (521)
Q Consensus 454 ~g~i~~~~~vV~v~TG~g~K~~~~~~~~~~~~--~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 513 (521)
++++||+++||||.||++++.++.... + +.++.-.. .....+++|.+++++.|.+
T Consensus 367 -----~~~~vV~i~tg~~~K~~~~v~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 426 (428)
T 1vb3_A 367 -----PGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMN 426 (428)
T ss_dssp -----TTCEEEEEECBCGGGGHHHHHHHHTSCCCCCHHHHHHHSSCCCCEEEESCHHHHHHHHTT
T ss_pred -----CCCcEEEEeCCCCCCCHHHHHHHhCCCCCCChHHHHHhcCcceeeeCCCCHHHHHHHHHh
Confidence 568999999999999999998865321 1 22221111 1223678999999988764
No 9
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=5.1e-56 Score=474.57 Aligned_cols=373 Identities=16% Similarity=0.152 Sum_probs=303.1
Q ss_pred CCCCCCccCCCCceeecCCCCcceeccccchhccCChHHHHHhhhhccCCCCCCCCCccccccccccCCCCcchhhcccc
Q 009957 85 GPDSPEFYSLDEIVYRSRSGGLLDVQHDMESLKKFDGAYWRDLFDSRVGKTTWPYGSGVWSKKEWVLPEIDPDDIVSAFE 164 (521)
Q Consensus 85 ~~~cg~~~~~~~~~~~c~cGGll~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iwr~~~~~lP~~~~~~~vsl~e 164 (521)
-+.|++.++.++..|.|+|+++++... ..+ .++.+. +.+. ...+|||.+| ||...++..+++|+
T Consensus 13 ~~~~~~~~~~~~~~w~~~~~~~~~~~~--~~~-~~~~~d---i~~a---------~~~l~~~~~~-l~~~~~~~~~~~g~ 76 (442)
T 3ss7_X 13 YPLVKDLVALKETTWFNPGTTSLAEGL--PYV-GLTEQD---VQDA---------HARLSRFAPY-LAKAFPETAATGGI 76 (442)
T ss_dssp CTHHHHHHTTCCCEEECTTCCCHHHHG--GGT-SCCHHH---HHHH---------HHHHHHHHHH-HHHHSGGGGGGTTC
T ss_pred ChHHHHHhccCCceeeCCCCCchhhhc--CcC-CCCHHH---HHHH---------HHHHHhCHHh-HhhhChhhhccCCC
Confidence 355677888899999999998875211 111 122222 2111 1268999995 78666778899999
Q ss_pred cCCccccccccc----cccCCC---CcEEEecCCCCC-CCChhHHHHHHHHHHHH-H-HHhcCCC---c-----------
Q 009957 165 GNSNLFWAERFG----KQFLGM---NDLWVKHCGISH-TGSFKDLGMTVLVSQVN-R-LRKMKRP---V----------- 220 (521)
Q Consensus 165 G~TPL~~~~~l~----~~~lg~---~~l~vK~E~~nP-TGSfKDRga~~~v~~a~-~-~~~~g~~---~----------- 220 (521)
+.|||+++++++ +. +|+ .+||+|+|++|| |||||||++.+++..+. + ..+.|.- .
T Consensus 77 ~~TPL~~~~~l~~~l~~~-~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~~r 155 (442)
T 3ss7_X 77 IESELVAIPAMQKRLEKE-YQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFK 155 (442)
T ss_dssp CCCCEEECHHHHHHHHHH-HTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHHHH
T ss_pred CCCCcEEhHhhhhHHHHh-hCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhhhh
Confidence 999999999876 54 553 589999999999 99999999999987632 2 2344420 0
Q ss_pred -----eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC-cc
Q 009957 221 -----VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP-IY 294 (521)
Q Consensus 221 -----~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~-~~ 294 (521)
.+|+++||||||.|+|++|+++|++|+||||++ ++..|+.+++.+||+|+.++++|+++.+.+++++++.+ +|
T Consensus 156 ~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~-~~~~k~~~~r~~GA~Vv~v~~~~~~a~~~a~~~a~~~~~~~ 234 (442)
T 3ss7_X 156 QFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSAD-ARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCF 234 (442)
T ss_dssp HHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEESSCHHHHHHHHHHHHHTCTTEE
T ss_pred hhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCC-CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHhCCCce
Confidence 379999999999999999999999999999997 79999999999999999999999999999999988864 78
Q ss_pred ccCCCCh-HhHhhHHHHHHHHHHhcC-------CCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCC
Q 009957 295 LANSLNS-LRLEGQKTAAVEILQQFD-------WEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANA 366 (521)
Q Consensus 295 ~~ns~Np-~~i~G~~T~a~EI~eQl~-------~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~ 366 (521)
++++.|+ ..++||+|+++||++|++ |+.||+||+|+|+||+++|++++|+++.. +.++||+|||+++
T Consensus 235 ~i~~~n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~-----~~v~vigVep~~~ 309 (442)
T 3ss7_X 235 FIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFG-----DHVHCFFAEPTHS 309 (442)
T ss_dssp ECCTTTCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHG-----GGEEEEEEEETTC
T ss_pred eCCCCChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcC-----CCCEEEEEEeCCc
Confidence 8888776 469999999999999985 45688999999999999999999987532 4679999999999
Q ss_pred chhhHHHhhCCcceeecc----cccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccch
Q 009957 367 NPLYLYYKSGWKDFKAVK----ASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHT 441 (521)
Q Consensus 367 ~~l~~~~~~G~~~~~~~~----~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePss 441 (521)
+++..++..|......+. ..+|+++||+++.|... .+.++++..+.++.|+|+|+++++++| +++|+++||++
T Consensus 310 ~~~~~~~~~G~~~~~~v~~~g~~~~TiAdgl~v~~~~~~--~~~~~~~~~d~~~~Vsd~e~~~a~~~L~~~eGi~~epss 387 (442)
T 3ss7_X 310 PCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGF--VGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSA 387 (442)
T ss_dssp CHHHHHHHHSCGGGCBGGGGTCCCCCSCGGGCCSBCCSS--HHHHHGGGCCEEEEECHHHHHHHHHHHHHHHCCCCCGGG
T ss_pred hHHHHHHhcCCCceeeeccCCCchhhHHhhcCCCCCchh--HHHHHHhhCCeEEEECHHHHHHHHHHHHHHCCCeEcHHH
Confidence 999999999864321121 35799999999988765 356678888999999999999999997 78999999999
Q ss_pred HHHHHHHHHHHhc-C-----CCCC----CCeEEEEeCCCCCCchHHHHhhh
Q 009957 442 GVALTALIKLRNS-G-----VIGP----LDRTVVVSTAHGLKFTQSKIDYH 482 (521)
Q Consensus 442 A~alAa~~~l~~~-g-----~i~~----~~~vV~v~TG~g~K~~~~~~~~~ 482 (521)
|+++||++++.++ + .+.+ +++||+++||+++|..+.+.+|.
T Consensus 388 aaalAa~~~l~~~~~~~~~~~l~~~~~~~~~vv~i~TGG~~~~~~~~~~~~ 438 (442)
T 3ss7_X 388 LAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYL 438 (442)
T ss_dssp GGGGGHHHHHHHCHHHHHHHTCCHHHHHTCEEEEEECBCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhchhhHHhcCCCcccCCCCeEEEEECCCCCCCHHHHHHHH
Confidence 9999999998762 1 1232 78999999999999888876554
No 10
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=5e-53 Score=442.29 Aligned_cols=315 Identities=16% Similarity=0.215 Sum_probs=259.1
Q ss_pred CccccccccccCCCCcchhhcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCc
Q 009957 141 SGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPV 220 (521)
Q Consensus 141 ~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~ 220 (521)
.+||||++| +|.+. ...++|||+++++|++. +|. +||+|+|++|||||||||++.+++..+.+ .| .
T Consensus 28 ~~~~ry~~~-~p~~~------~~~~~TPL~~l~~l~~~-~g~-~i~~K~E~~~ptGSfKdRga~~~l~~a~~---~g--~ 93 (372)
T 1p5j_A 28 QQMGRGSEF-MMSGE------PLHVKTPIRDSMALSKM-AGT-SVYLKMDSAQPSGSFKIRGIGHFCKRWAK---QG--C 93 (372)
T ss_dssp -------------CC------CSSCCCCEEEEHHHHHH-HTS-CEEEECGGGSGGGBTTHHHHHHHHHHHHH---TT--C
T ss_pred CccccHHHh-ccccc------CCCCCCCceEcHhhHHH-hCC-EEEEEEcCCCCCCChHHHHHHHHHHHHHH---cC--C
Confidence 379999995 77542 35689999999998876 664 89999999999999999999999887643 33 4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhc-CCccccCCC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSE-LPIYLANSL 299 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~-~~~~~~ns~ 299 (521)
.+|+++||||||.|+|++|++.|++|+||||++ ++..|+.+++.+||+|+.++++++++.+.+++++++ .++++++++
T Consensus 94 ~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~a~~~a~~l~~~~~~~~~v~~~ 172 (372)
T 1p5j_A 94 AHFVCSSAGNAGMAAAYAARQLGVPATIVVPGT-TPALTIERLKNEGATCKVVGELLDEAFELAKALAKNNPGWVYIPPF 172 (372)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHTCCEEEEECTT-CCHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHHSTTEEECCSS
T ss_pred CEEEEeCCCHHHHHHHHHHHHcCCcEEEEECCC-CCHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHHHhcCCcEEeCCC
Confidence 689999999999999999999999999999998 799999999999999999999999999999999888 477777765
Q ss_pred -ChHhHhhHHHHHHHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCc
Q 009957 300 -NSLRLEGQKTAAVEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWK 378 (521)
Q Consensus 300 -Np~~i~G~~T~a~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~ 378 (521)
||.+++||+|+++||++|++ ..||+||+|+|+||+++|++++|++ +|+ +.+|||+||+++++++.++++.|.
T Consensus 173 ~n~~~~~G~~t~~~Ei~~ql~-~~~d~vvvpvG~GG~~~Gi~~~~k~---~~~--p~~~vigVe~~~~~~~~~~~~~g~- 245 (372)
T 1p5j_A 173 DDPLIWEGHASIVKELKETLW-EKPGAIALSVGGGGLLCGVVQGLQE---CGW--GDVPVIAMETFGAHSFHAATTAGK- 245 (372)
T ss_dssp CCHHHHHHHTHHHHHHHHHCS-SCCSEEEEECSSSHHHHHHHHHHHH---TTC--TTCCEEEEEETTSCHHHHHHHHTS-
T ss_pred CCHHHHhhHHHHHHHHHHHcC-CCCCEEEEecCCchHHHHHHHHHHH---hCC--CCceEEEEecCCChHHHHHHHcCC-
Confidence 89999999999999999997 3699999999999999999998874 554 567999999999999999999885
Q ss_pred ceeecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHH-----HH
Q 009957 379 DFKAVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIK-----LR 452 (521)
Q Consensus 379 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~-----l~ 452 (521)
....+...|++++|+++.+. ...+..++...+.++.|+|+|+++++++| +++|+++||++|+++||+++ +.
T Consensus 246 -~~~~~~~~tia~gl~~~~~~--~~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~epssa~alaa~~~~~~~~l~ 322 (372)
T 1p5j_A 246 -LVSLPKITSVAKALGVKTVG--SQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSHVIQKLQ 322 (372)
T ss_dssp -CCCCSCCCCSCGGGCCSSCC--HHHHHHHHHSCEEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTHHHHHH
T ss_pred -ceecCCCceeecccCCCCCC--HHHHHHHhhcCCEEEEECHHHHHHHHHHHHHHcCCeechhHHHHHHHHHHhhHHHHh
Confidence 33444557999999876554 33556677778889999999999999987 88999999999999999873 44
Q ss_pred hcCC-CCCCCeEEEEeCCCCCCchHHHHh
Q 009957 453 NSGV-IGPLDRTVVVSTAHGLKFTQSKID 480 (521)
Q Consensus 453 ~~g~-i~~~~~vV~v~TG~g~K~~~~~~~ 480 (521)
+.|. +.++++||+++||++..+.+.+.+
T Consensus 323 ~~g~~~~~~~~Vv~i~tgg~~~~~~~~~~ 351 (372)
T 1p5j_A 323 LEGNLRTPLPSLVVIVCGGSNISLAQLRA 351 (372)
T ss_dssp HTTSSCSSCSCEEEECCBCSSCCHHHHHH
T ss_pred hccccCCCCCeEEEEECCCCCCCHHHHHH
Confidence 4564 567899999999988666665533
No 11
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=2e-52 Score=436.63 Aligned_cols=315 Identities=17% Similarity=0.212 Sum_probs=261.0
Q ss_pred CccccccccccCCCCcchhhcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCc
Q 009957 141 SGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPV 220 (521)
Q Consensus 141 ~~iwr~~~~~lP~~~~~~~vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~ 220 (521)
.++|||.++ +|.. ....++|||+++++|++. +|. +||+|+|++|||||||||++.+++..+. +.| .
T Consensus 28 ~~l~r~~~~-~~~~------~~~~~~TPL~~~~~l~~~-~g~-~v~~K~E~~~ptGSfK~Rga~~~i~~a~---~~g--~ 93 (364)
T 4h27_A 28 QQMGRGSEF-MMSG------EPLHVKTPIRDSMALSKM-AGT-SVYLKMDSAQPSGSFKIRGIGHFCKRWA---KQG--C 93 (364)
T ss_dssp --------------------CCSSCCCCEEEEHHHHHH-HTS-EEEEEEGGGSTTSBTHHHHHHHHHHHHH---HTT--C
T ss_pred cccchhHHh-hhhc------CCCCCcCCeEEChhhHHH-hCC-EEEEEeCCCCCCCCHHHHHHHHHHHHHH---hcC--C
Confidence 589999996 5632 234679999999999876 676 8999999999999999999999888764 334 4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcC-CccccCCC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSEL-PIYLANSL 299 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~-~~~~~ns~ 299 (521)
.+|+++||||||.|+|++|++.|++|+||||++ ++..|+.+++.+||+|+.++++++++++.+++++++. ++++++++
T Consensus 94 ~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~Vv~v~~~~~~a~~~a~~l~~~~~~~~~~~~~ 172 (364)
T 4h27_A 94 AHFVCSSSGNAGMAAAYAARQLGVPATIVVPGT-TPALTIERLKNEGATVKVVGELLDEAFELAKALAKNNPGWVYIPPF 172 (364)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHTCCEEEEEETT-SCHHHHHHHHTTTCEEEEECSSTTHHHHHHHHHHHHSTTEEEECSS
T ss_pred CEEEEeCCChHHHHHHHHHHHhCCceEEEECCC-CCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhCCCeEEeCCC
Confidence 689999999999999999999999999999998 7899999999999999999999999999999999987 78888875
Q ss_pred -ChHhHhhHHHHHHHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCc
Q 009957 300 -NSLRLEGQKTAAVEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWK 378 (521)
Q Consensus 300 -Np~~i~G~~T~a~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~ 378 (521)
||.+++||.|+++||++|+++ .||+||+|+|+||+++|++++|++ +|+ +..++|+||+++++++.++++.|.
T Consensus 173 ~np~~~~G~~t~~~Ei~~q~~~-~~D~vvvpvG~GG~~aGi~~~~k~---~~~--p~~~vigVe~~~~~~~~~~~~~g~- 245 (364)
T 4h27_A 173 DDPLIWEGHASIVKELKETLWE-KPGAIALSVGGGGLLCGVVQGLQE---VGW--GDVPVIAMETFGAHSFHAATTAGK- 245 (364)
T ss_dssp CSHHHHHHHTHHHHHHHHHCSS-CCSEEEEECSSSHHHHHHHHHHHH---TTC--TTCCEEEEEETTSCHHHHHHHHTS-
T ss_pred CCHHHHHHHHHHHHHHHHHhCC-CCCEEEEcCCccHHHHHHHHHHHH---hCC--CCCeEEEEecCCChHHHHHHHCCC-
Confidence 899999999999999999984 699999999999999999998764 454 446899999999999999999985
Q ss_pred ceeecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHH-----HHH
Q 009957 379 DFKAVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALI-----KLR 452 (521)
Q Consensus 379 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~-----~l~ 452 (521)
....+...|++++|+++.+. ...+..++++.+..+.|+|+|+++++++| +++|+++||++|+++||++ ++.
T Consensus 246 -~~~~~~~~tia~gl~~~~~~--~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~eps~aaalaa~~~~k~~~l~ 322 (364)
T 4h27_A 246 -LVSLPKITSVAKALGVKTVG--AQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALAAVYSHVIQKLQ 322 (364)
T ss_dssp -CCCCSCCCCSCGGGCCSSCC--HHHHHHHTTSCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHHHH
T ss_pred -cccCCCCCcHHHHhCCCCCc--HHHHHHHHhcCCEEEEECHHHHHHHHHHHHHHCCCeEcccHHHHHHHHHhhhhHHhh
Confidence 33344567899999876543 34566677788888899999999999997 8899999999999999984 677
Q ss_pred hcCCCCC-CCeEEEEeCCCCCCchHHHHh
Q 009957 453 NSGVIGP-LDRTVVVSTAHGLKFTQSKID 480 (521)
Q Consensus 453 ~~g~i~~-~~~vV~v~TG~g~K~~~~~~~ 480 (521)
++|.+.+ +++||+++||++..+.+.+.+
T Consensus 323 ~~g~~~~~~~~Vv~v~tGG~~~d~~~l~~ 351 (364)
T 4h27_A 323 LEGNLRTPLPSLVVIVCGGSNISLAQLRA 351 (364)
T ss_dssp HTTSSCSSCCEEEEEECBCSSCCHHHHHH
T ss_pred hccCcCCCCCeEEEEECCCCCCCHHHHHH
Confidence 7888875 689999999987676766543
No 12
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.8e-51 Score=417.93 Aligned_cols=297 Identities=19% Similarity=0.239 Sum_probs=256.7
Q ss_pred cCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHhcCC
Q 009957 165 GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGI 244 (521)
Q Consensus 165 G~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi 244 (521)
++|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+ .| ..+|+++||||||.|+|++|++.|+
T Consensus 6 ~~TPL~~~~~l~~~-~g~-~v~~K~E~~~ptgS~K~R~a~~~l~~a~~---~g--~~~vv~~ssGN~g~alA~~a~~~G~ 78 (318)
T 2rkb_A 6 VVTPLLESWALSQV-AGM-PVFLKCENVQPSGSFKIRGIGHFCQEMAK---KG--CRHLVCSSGGNAGIAAAYAARKLGI 78 (318)
T ss_dssp CCCCEEEEHHHHHH-HTS-CEEEEEGGGSTTSBTTHHHHHHHHHHHHH---TT--CCEEEECCCSHHHHHHHHHHHHHTC
T ss_pred ccCCceehHhhHHH-hCC-eEEEEecCCCCCCCHHHHHHHHHHHHHHH---cC--CCEEEEECCchHHHHHHHHHHHcCC
Confidence 57999999988776 664 79999999999999999999999887643 34 4689999999999999999999999
Q ss_pred CEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCCC-ChHhHhhHHHHHHHHHHhcCCCCC
Q 009957 245 PSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANSL-NSLRLEGQKTAAVEILQQFDWEVP 323 (521)
Q Consensus 245 ~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~~~p 323 (521)
+|+||||++ ++..|+.+|+.+||+|+.++++++++.+.+++++++.++++++++ ||.+++||+|+++||++|+++ .|
T Consensus 79 ~~~i~~p~~-~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~n~~~~~g~~t~~~Ei~~q~~~-~~ 156 (318)
T 2rkb_A 79 PATIVLPES-TSLQVVQRLQGEGAEVQLTGKVWDEANLRAQELAKRDGWENVPPFDHPLIWKGHASLVQELKAVLRT-PP 156 (318)
T ss_dssp CEEEEECTT-CCHHHHHHHHHTTCEEEECCSSHHHHHHHHHHHHHSTTEEECCSSCSHHHHHHHHHHHHHHHHHSSS-CC
T ss_pred CEEEEECCC-CcHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHHHhcCCEEeCCCCChhhccchhHHHHHHHHhcCC-CC
Confidence 999999997 789999999999999999999999999999999988888778764 899999999999999999973 69
Q ss_pred cEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhhccCCCccHHH
Q 009957 324 DWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAIQIGDPVSIDR 403 (521)
Q Consensus 324 D~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i~i~~P~~~~~ 403 (521)
|+||+|+|+||+++|++++|++ +|+ +.+|||+||+++++++.++++.|. ....+...|++++|+.+.+. ..
T Consensus 157 d~vvvpvG~GG~~~Gi~~~~k~---~~~--~~~~vi~ve~~~~~~~~~~~~~g~--~~~~~~~~t~a~gl~~~~~~--~~ 227 (318)
T 2rkb_A 157 GALVLAVGGGGLLAGVVAGLLE---VGW--QHVPIIAMETHGAHCFNAAITAGK--LVTLPDITSVAKSLGAKTVA--AR 227 (318)
T ss_dssp SEEEEECSSSHHHHHHHHHHHH---HTC--TTSCEEEEEETTBCHHHHHHHHTS--CCBCSCCCSSCGGGCCSBCC--HH
T ss_pred CEEEEeeCCCcHHHHHHHHHHH---hCC--CCCEEEEEecCCChHHHHHHHcCC--cccCCCCCceecccCCCCCC--HH
Confidence 9999999999999999998874 454 568999999999999999999885 33445567999999865543 33
Q ss_pred HHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHH-----HHHhcCC-CCCCCeEEEEeCCCCCCchH
Q 009957 404 AVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALI-----KLRNSGV-IGPLDRTVVVSTAHGLKFTQ 476 (521)
Q Consensus 404 ~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~-----~l~~~g~-i~~~~~vV~v~TG~g~K~~~ 476 (521)
.++.++...+.++.|+|+|+++++++| +++|+++||++|+++||+. ++.+.|. +.++++||+++||++..+.+
T Consensus 228 ~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a~a~aa~~~~~~~~~~~~g~~~~~~~~vv~i~tgg~~~~~~ 307 (318)
T 2rkb_A 228 ALECMQVCKIHSEVVEDTEAVSAVQQLLDDERMLVEPACGAALAAIYSGLLRRLQAEGCLPPSLTSVVVIVCGGNNINSR 307 (318)
T ss_dssp HHHHHHHSCEEEEEECHHHHHHHHHHHHHHHCBCCCHHHHHHHHHHHTSHHHHHHHTTSSCSSCSCEEEEECBCSSCCHH
T ss_pred HHHHHHHcCCEEEEECHHHHHHHHHHHHHhcCcEEchhHHHHHHHHHHhhHHHHhhccccCCCCCeEEEEECCCCCCCHH
Confidence 456677777889999999999999987 8899999999999999876 3445565 56789999999999877776
Q ss_pred HHH
Q 009957 477 SKI 479 (521)
Q Consensus 477 ~~~ 479 (521)
.+.
T Consensus 308 ~l~ 310 (318)
T 2rkb_A 308 ELQ 310 (318)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 13
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=3.2e-51 Score=427.88 Aligned_cols=293 Identities=17% Similarity=0.173 Sum_probs=259.0
Q ss_pred ccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHh
Q 009957 162 AFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCAS 241 (521)
Q Consensus 162 l~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~ 241 (521)
-..+.|||++++++++. +|. +||+|+|++|||||||||++.+++..+.... + ..+|+++||||||.|+|++|++
T Consensus 56 ~~i~~TPL~~l~~l~~~-~g~-~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~--~--~~~vv~assGN~g~a~A~aa~~ 129 (366)
T 3iau_A 56 DVAIESPLELAEKLSDR-LGV-NFYIKREDKQRVFSFKLRGAYNMMSNLSREE--L--DKGVITASAGNHAQGVALAGQR 129 (366)
T ss_dssp GTCCCCCEEECHHHHHH-HTS-EEEEEEGGGSTTSBTTHHHHHHHHHTSCHHH--H--HHCEEEECSSHHHHHHHHHHHH
T ss_pred hhcCCCCcEEhhhhhHh-hCC-EEEEEecCCCCCcchHHHHHHHHHHHHHHhC--C--CCEEEEeCCCHHHHHHHHHHHH
Confidence 34589999999999876 676 8999999999999999999999988764321 1 2468999999999999999999
Q ss_pred cCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCCC-ChHhHhhHHHHHHHHHHhcCC
Q 009957 242 AGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANSL-NSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 242 ~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~ 320 (521)
.|++|+|+||++ ++..|+.+++.+||+|+.++++|++|++.+++++++.++++++++ ||.+++||+|+++||++|++
T Consensus 130 ~G~~~~iv~P~~-~~~~k~~~~~~~GA~V~~v~~~~~~~~~~a~~~~~~~~~~~i~~~~n~~~i~g~~t~~~Ei~~q~~- 207 (366)
T 3iau_A 130 LNCVAKIVMPTT-TPQIKIDAVRALGGDVVLYGKTFDEAQTHALELSEKDGLKYIPPFDDPGVIKGQGTIGTEINRQLK- 207 (366)
T ss_dssp TTCCEEEEECTT-CCHHHHHHHHHTTCEEEECCSSHHHHHHHHHHHHHHHTCEECCSSSSHHHHHHHHHHHHHHHHHCC-
T ss_pred hCCceEEEeCCC-CCHHHHHHHHHCCCeEEEECcCHHHHHHHHHHHHHhcCCEecCCCCChHHHHHHHHHHHHHHHhcC-
Confidence 999999999996 799999999999999999999999999999999998888888875 89999999999999999995
Q ss_pred CCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhhccCCCcc
Q 009957 321 EVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAIQIGDPVS 400 (521)
Q Consensus 321 ~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i~i~~P~~ 400 (521)
.||+||+|+|+||+++|++++|+++ + +.+++++||+.+++++.++++.|. ..+.+...|++++|+++.|..
T Consensus 208 -~~d~vvvpvG~GG~~~Gi~~~~k~~---~---~~~~vigVe~~~~~~l~~~~~~g~--~~~~~~~~tia~gl~~~~~~~ 278 (366)
T 3iau_A 208 -DIHAVFIPVGGGGLIAGVATFFKQI---A---PNTKIIGVEPYGAASMTLSLHEGH--RVKLSNVDTFADGVAVALVGE 278 (366)
T ss_dssp -SEEEEEEECSSSHHHHHHHHHHHHH---S---TTSEEEEEEEGGGCHHHHHHHHTS--CCEESCCCCSSGGGCCSSCCH
T ss_pred -CCCEEEEccCchHHHHHHHHHHHHh---C---CCCeEEEEeecCChHHHHHHHcCC--CCcCCCccchhhhhcCCCCcH
Confidence 7999999999999999999988753 2 568999999999999999999995 344456689999999887764
Q ss_pred HHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCc
Q 009957 401 IDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLKF 474 (521)
Q Consensus 401 ~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K~ 474 (521)
. .+..+++..+.++.|+|+|++++++++ +++|+++||+||++++|++++.+++.+. +++||+++||++.+.
T Consensus 279 ~--~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~sa~alaa~~~~~~~~~~~-g~~Vv~i~tGgn~d~ 350 (366)
T 3iau_A 279 Y--TFAKCQELIDGMVLVANDGISAAIKDVYDEGRNILETSGAVAIAGAAAYCEFYKIK-NENIVAIASGANMDF 350 (366)
T ss_dssp H--HHHHHHHHCCEEEEECHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHTTCC-SCEEEEEECBCCCCG
T ss_pred H--HHHHHHhcCCCceeECHHHHHHHHHHHHHHcCcEEcHHHHHHHHHHHHHHHhcCCC-CCeEEEEeCCCCCCH
Confidence 3 355677888999999999999999997 7899999999999999999998877654 889999999998875
No 14
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=6.7e-51 Score=421.73 Aligned_cols=295 Identities=19% Similarity=0.219 Sum_probs=255.9
Q ss_pred cccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHhc
Q 009957 163 FEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASA 242 (521)
Q Consensus 163 ~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~ 242 (521)
..++|||+++++|++. +|. +||+|+|++|||||||||++.+++..+.+.. + ..+|+++||||||.|+|++|++.
T Consensus 37 ~i~~TPL~~l~~l~~~-~g~-~i~~K~E~~~ptGSfKdR~a~~~i~~a~~~~--~--~~~vv~~ssGN~g~alA~aa~~~ 110 (342)
T 2gn0_A 37 KIYKTGMPRSNYFSER-CKG-EIFLKFENMQRTGSFKIRGAFNKLSSLTEAE--K--RKGVVACSAGNHAQGVSLSCAML 110 (342)
T ss_dssp TSCCCCCCBCHHHHHH-HTS-EEEEEEGGGSGGGBTHHHHHHHHHHHSCHHH--H--HTCEEEECSSHHHHHHHHHHHHH
T ss_pred hcCCCCceEchhhHHH-hCC-EEEEEEccCCCcCChHHHHHHHHHHHHHHhc--C--CCEEEEECCChHHHHHHHHHHHc
Confidence 4589999999998876 665 8999999999999999999999998764211 1 34689999999999999999999
Q ss_pred CCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCCC-ChHhHhhHHHHHHHHHHhcCCC
Q 009957 243 GIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANSL-NSLRLEGQKTAAVEILQQFDWE 321 (521)
Q Consensus 243 Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~~ 321 (521)
|++|+|+||++ ++..|+.+++.+||+|+.++++++++.+.+++++++.++++++++ ||.+++||+|+++||++|++
T Consensus 111 G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~n~~~~~g~~t~~~Ei~~q~~-- 187 (342)
T 2gn0_A 111 GIDGKVVMPKG-APKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVETEGRIFIPPYDDPKVIAGQGTIGLEIMEDLY-- 187 (342)
T ss_dssp TCCEEEEECTT-SCHHHHHHHHHHSCEEEECCSSHHHHHHHHHHHHHHHCCEECCSSSSHHHHHHHHHHHHHHHHHCT--
T ss_pred CCCEEEEECCC-CCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhcCCEEeCCCCCHHHHHHHHHHHHHHHHHcC--
Confidence 99999999997 799999999999999999999999999999999988888888886 69999999999999999998
Q ss_pred CCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhhccCCCccH
Q 009957 322 VPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAIQIGDPVSI 401 (521)
Q Consensus 322 ~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i~i~~P~~~ 401 (521)
.||+||+|+|+||+++|++++|+++ .+.+|||+||+++++++.++++.|. ..+.....|++++|+++.|...
T Consensus 188 ~~d~vvvpvG~GG~~~Gi~~~~k~~------~p~~~vigve~~~~~~~~~s~~~g~--~~~~~~~~t~a~gl~~~~~~~~ 259 (342)
T 2gn0_A 188 DVDNVIVPIGGGGLIAGIAIAIKSI------NPTIKVIGVQAENVHGMAASYYTGE--ITTHRTTGTLADGCDVSRPGNL 259 (342)
T ss_dssp TCCEEEEECSSSHHHHHHHHHHHHH------CTTSEEEEEEETTBCHHHHHHHHTS--CCCCCSSCCSCGGGCCSSCCHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHh------CCCCeEEEEEeCCChhHHHHHHcCC--ccccCCCCccccccCCCCccHH
Confidence 6999999999999999999998863 2678999999999999999999985 3334445799999998877654
Q ss_pred HHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCchHHH
Q 009957 402 DRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLKFTQSK 478 (521)
Q Consensus 402 ~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K~~~~~ 478 (521)
. +..+++..+.++.|+|+|+++++++| +++|+++||++|++++|++++.+.+.+ ++++||+++||+ .++++.+
T Consensus 260 ~--~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~-~~~~Vv~i~tGg-~~d~~~~ 333 (342)
T 2gn0_A 260 T--YEIVRELVDDIVLVSEDEIRNSMIALIQRNKVITEGAGALACAALLSGKLDSHI-QNRKTVSIISGG-NIDLSRV 333 (342)
T ss_dssp H--HHHHHHHCCEEEEECHHHHHHHHHHHHHHHCBCCCTGGGHHHHHHHHTTTHHHH-TTSEEEEEECBC-CCCHHHH
T ss_pred H--HHHHHHcCCEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHhhhhccC-CCCEEEEEECCC-CCCHHHH
Confidence 3 45567788999999999999999997 789999999999999999987653223 688999999995 5666655
No 15
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=1e-50 Score=414.65 Aligned_cols=287 Identities=18% Similarity=0.197 Sum_probs=249.0
Q ss_pred ccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHh
Q 009957 162 AFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCAS 241 (521)
Q Consensus 162 l~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~ 241 (521)
...++|||++++++++. +|. +||+|+|++|||||||||++.+++..+. + ..+|+++||||||.|+|++|++
T Consensus 16 ~~~~~TPL~~~~~l~~~-~g~-~i~~K~E~~~ptgSfKdR~a~~~i~~l~-----~--~~~vv~~ssGN~g~alA~~a~~ 86 (311)
T 1ve5_A 16 PYTHRTPLLTSRLLDGL-LGK-RLLLKAEHLQKTGSFKARGALSKALALE-----N--PKGLLAVSSGNHAQGVAYAAQV 86 (311)
T ss_dssp GGSCCCCEEECHHHHHH-TTS-EEEEEEGGGSGGGBTHHHHHHHHHHHSS-----S--CCCEEEECSSHHHHHHHHHHHH
T ss_pred ccCCCCCceechhhHHh-hCC-eEEEEecCCCCcCCcHHHHHHHHHHHhc-----C--CCeEEEECCCcHHHHHHHHHHH
Confidence 34579999999988876 665 8999999999999999999999988753 2 3569999999999999999999
Q ss_pred cCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCCC-ChHhHhhHHHHHHHHHHhcC-
Q 009957 242 AGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANSL-NSLRLEGQKTAAVEILQQFD- 319 (521)
Q Consensus 242 ~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~- 319 (521)
.|++|+||||++ ++..|+.+++.+||+|+.++++++++++.+++++++.++++++++ ||.+++||+|+++||++|++
T Consensus 87 ~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~n~~~~~g~~t~~~Ei~~q~~~ 165 (311)
T 1ve5_A 87 LGVKALVVMPED-ASPYKKACARAYGAEVVDRGVTAKNREEVARALQEETGYALIHPFDDPLVIAGQGTAGLELLAQAGR 165 (311)
T ss_dssp HTCCEEEECCCC---CCHHHHHHHTTCEEECTTCCTTTHHHHHHHHHHHHCCEECCSSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-CCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhcCcEecCCCCCcchhhhccHHHHHHHHHHHh
Confidence 999999999997 788899999999999999999999999999999888888888887 79999999999999999994
Q ss_pred --CCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecc-cccchhhhhccC
Q 009957 320 --WEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVK-ASTTFASAIQIG 396 (521)
Q Consensus 320 --~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~-~~~Tia~~i~i~ 396 (521)
+ .||+||+|+|+||+++|++++|+++ + +.+|||+||++++++++++++.|.. .+.. ...|+++++.+.
T Consensus 166 ~~~-~~d~vvvpvG~Gg~~~Gi~~~~k~~---~---~~~~vigve~~~~~~~~~~~~~g~~--~~~~~~~~~i~~gl~~~ 236 (311)
T 1ve5_A 166 MGV-FPGAVLAPVGGGGLLAGLATAVKAL---S---PTTLVLGVEPEAADDAKRSLEAGRI--LRLEAPPRTRADGVRTL 236 (311)
T ss_dssp HTC-CCSEEEEECSSSHHHHHHHHHHHHH---C---TTSEEEEEEEGGGCHHHHHHHHTSC--CCCSSCCCCSCGGGCCS
T ss_pred cCC-CCCEEEEccCchHHHHHHHHHHHHh---C---CCCEEEEEEeCCChHHHHHHHcCCc--cccCCCCCeeeCcCCCC
Confidence 3 6999999999999999999998754 2 5789999999999999999999852 2333 357899999876
Q ss_pred CCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCC
Q 009957 397 DPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLK 473 (521)
Q Consensus 397 ~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K 473 (521)
.|... .+..+++..+.++.|+|+|+++++++| +++|+++||+||++++|++++.++ . +++||+++||++..
T Consensus 237 ~~~~~--~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~---~-~~~vv~i~tgg~~d 308 (311)
T 1ve5_A 237 SLGER--TFPILRERVDGILTVSEEALLEAERLLFTRTKQVVEPTGALPLAAVLEHGAR---L-PQTLALLLSGGNRD 308 (311)
T ss_dssp SCCTT--THHHHHHHCCEEEEECHHHHHHHHHHHHHHTCBCCCGGGGHHHHHHHHHGGG---S-CSEEEEEECBCCCC
T ss_pred CccHH--HHHHHHhcCCEEEEECHHHHHHHHHHHHHhcCceEchHHHHHHHHHHhhhhc---c-CCEEEEEECCCCCC
Confidence 66543 244567778889999999999999997 789999999999999999998766 3 78999999998764
No 16
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=1.8e-50 Score=419.08 Aligned_cols=297 Identities=20% Similarity=0.193 Sum_probs=251.7
Q ss_pred ccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHhcC
Q 009957 164 EGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAG 243 (521)
Q Consensus 164 eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~G 243 (521)
.++|||+++++|++. +|. +||+|+|++|||||||||++.+++..+.+.... .+.++|+++||||||.|+|++|+++|
T Consensus 23 i~~TPL~~~~~l~~~-~g~-~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~-~~~~~vv~~SsGNhg~a~A~aa~~~G 99 (346)
T 3l6b_A 23 IHLTPVLTSSILNQL-TGR-NLFFKCELFQKTGSFKIRGALNAVRSLVPDALE-RKPKAVVTHSSGNHGQALTYAAKLEG 99 (346)
T ss_dssp SCCCCEECCHHHHHH-HTS-EEEEEEGGGSGGGBTHHHHHHHHHHTTC------CCCSCEEEECSSHHHHHHHHHHHHTT
T ss_pred cCCCCeEEchhhHHH-hCC-eEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccc-cCCCEEEEeCCCHHHHHHHHHHHHhC
Confidence 478999999998876 664 899999999999999999999999877543211 12356999999999999999999999
Q ss_pred CCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCCC-ChHhHhhHHHHHHHHHHhcCCCC
Q 009957 244 IPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANSL-NSLRLEGQKTAAVEILQQFDWEV 322 (521)
Q Consensus 244 i~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~~~ 322 (521)
++|+||||++ ++..|+.+++.+||+|+.++++++++.+.+++++++.++++++++ ||..++||+|+++||++|++ .
T Consensus 100 ~~~~iv~p~~-~~~~k~~~~~~~GA~V~~v~~~~~~~~~~a~~l~~~~~~~~i~~~~np~~~~g~~t~~~Ei~~q~~--~ 176 (346)
T 3l6b_A 100 IPAYIVVPQT-APDCKKLAIQAYGASIVYCEPSDESRENVAKRVTEETEGIMVHPNQEPAVIAGQGTIALEVLNQVP--L 176 (346)
T ss_dssp CCEEEEEETT-SCHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHTCEECCSSSCHHHHHHHHHHHHHHHHHST--T
T ss_pred CCEEEEECCC-CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHhcCCEEECCCCChHHHHHHHHHHHHHHHhCC--C
Confidence 9999999998 789999999999999999999999999999999988888878764 89999999999999999996 7
Q ss_pred CcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeec-ccccchhhhhccCCCccH
Q 009957 323 PDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAV-KASTTFASAIQIGDPVSI 401 (521)
Q Consensus 323 pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~-~~~~Tia~~i~i~~P~~~ 401 (521)
||+||+|+|+||+++|++++|+++ .+.+|+|+||+++++++.+++..|.. .+. ....|++++|+.....+
T Consensus 177 ~d~vvv~vG~GG~~aGi~~~~k~~------~p~~~vigVe~~~~~~~~~s~~~g~~--~~~~~~~~tia~gl~~~~g~~- 247 (346)
T 3l6b_A 177 VDALVVPVGGGGMLAGIAITVKAL------KPSVKVYAAEPSNADDCYQSKLKGKL--MPNLYPPETIADGVKSSIGLN- 247 (346)
T ss_dssp CCEEEEECSSSHHHHHHHHHHHHH------CTTSEEEEEEEGGGCHHHHHHHHTSC--CCCSSCCCCSCGGGCSCCCTT-
T ss_pred CCEEEEecCccHHHHHHHHHHHHh------CCCCEEEEEecCCCHHHHHHHHcCCc--cccCCCCCchhhhccCCCcHH-
Confidence 999999999999999999998863 25789999999999999999999853 222 23479999998543333
Q ss_pred HHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCchHHH
Q 009957 402 DRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLKFTQSK 478 (521)
Q Consensus 402 ~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K~~~~~ 478 (521)
.+..+++..+.++.|+|+|+++++++| +++|+++||++|+++||+++....+...++++||+++|| |.++.+.+
T Consensus 248 --~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~~~~~~Vv~i~sG-G~~d~~~~ 322 (346)
T 3l6b_A 248 --TWPIIRDLVDDIFTVTEDEIKCATQLVWERMKLLIEPTAGVGVAAVLSQHFQTVSPEVKNICIVLSG-GNVDLTSS 322 (346)
T ss_dssp --HHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHSGGGGGSCTTCCEEEEEECB-CCCCTTGG
T ss_pred --HHHHHHHcCCeEEEECHHHHHHHHHHHHHHCCcEEcHHHHHHHHHHHHhhhhhccCCCCeEEEEcCC-CCCCHHHH
Confidence 234456778889999999999999997 789999999999999999876544444578899999998 67777773
No 17
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=8.5e-50 Score=408.91 Aligned_cols=295 Identities=17% Similarity=0.129 Sum_probs=245.5
Q ss_pred hcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHH
Q 009957 160 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYC 239 (521)
Q Consensus 160 vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 239 (521)
++..+|+|||++++++ + +| .+||+|+|++|||||||||++.+++..+.+..+.. +..+|+++||||||.|+|++|
T Consensus 7 i~~~~~~TPL~~l~~l-~--~g-~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~-~~~~vv~~ssGN~g~a~A~~a 81 (316)
T 1y7l_A 7 NSYSIGNTPLVRLKHF-G--HN-GNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLT-KGKEIVDATSGNTGIALAYVA 81 (316)
T ss_dssp GGGGCCCCCEEECSSS-S--ST-TCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSC-TTCEEEESCCSHHHHHHHHHH
T ss_pred hHHhcCCCCcEECccC-C--CC-CEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCC-CCCEEEEeCCcHHHHHHHHHH
Confidence 5667899999999988 4 56 48999999999999999999999998764321111 125899999999999999999
Q ss_pred HhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC--HHHHHHHHHHHHhcCC-c-cccCC-CChHhHh-hHHHHHHH
Q 009957 240 ASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD--FDGCMKLIREVTSELP-I-YLANS-LNSLRLE-GQKTAAVE 313 (521)
Q Consensus 240 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~--~dd~~~~~~~~~~~~~-~-~~~ns-~Np~~i~-G~~T~a~E 313 (521)
+++|++|+||||++ ++..|+.+++.+||+|+.++++ ++++.+.+++++++.+ . |++++ .||.+++ ||+|+++|
T Consensus 82 ~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 160 (316)
T 1y7l_A 82 AARGYKITLTMPET-MSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPE 160 (316)
T ss_dssp HHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHHH
T ss_pred HHcCCcEEEEECCC-CCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHHHH
Confidence 99999999999997 7999999999999999999986 8999999999988875 5 77777 4888766 69999999
Q ss_pred HHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhh
Q 009957 314 ILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAI 393 (521)
Q Consensus 314 I~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i 393 (521)
|++|+++ .||+||+|+|+||+++|++++|++ ++. +.+|||+||+++++.+.. ++.|.. .. ...+.+++|
T Consensus 161 i~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~---~~~--~~~~vi~ve~~~~~~~~~-~~~g~~--~~--~~~~~~~gi 229 (316)
T 1y7l_A 161 IWKDTDG-KVDVVVAGVGTGGSITGISRAIKL---DFG--KQITSVAVEPVESPVISQ-TLAGEE--VK--PGPHKIQGI 229 (316)
T ss_dssp HHHHTTT-CEEEEEEECSSSHHHHHHHHHHHH---TSC--CCCEEEEEEETTSCHHHH-HHHTCC--CC--CCCCSCTTS
T ss_pred HHHHcCC-CCCEEEEeCCccccHHHHHHHHHH---hCC--CCCEEEEEecCCCccccc-cccCCc--cC--CCCcccCcC
Confidence 9999985 599999999999999999998875 332 578999999999877776 777742 11 224556777
Q ss_pred ccCC-CccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCC
Q 009957 394 QIGD-PVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHG 471 (521)
Q Consensus 394 ~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g 471 (521)
+.+. |.++ .+...+.++.|+|+|+++++++| +++|+++||+||++++|++++.+++ ..++++||+++||+|
T Consensus 230 ~~~~~~~~~------~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~~laa~~~~~~~~-~~~~~~vv~i~tg~g 302 (316)
T 1y7l_A 230 GAGFIPKNL------DLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRLAKLP-EFADKLIVVILPSAS 302 (316)
T ss_dssp CCSSCCTTC------CGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSG-GGTTCEEEEEECBBC
T ss_pred CCCCCCchh------hHhhCCEEEEECHHHHHHHHHHHHHhhCCeEcHHHHHHHHHHHHHHHhc-CCCCCeEEEEECCCC
Confidence 7553 3322 23456789999999999999997 7799999999999999999987664 336789999999999
Q ss_pred CCchHHH
Q 009957 472 LKFTQSK 478 (521)
Q Consensus 472 ~K~~~~~ 478 (521)
.||.+++
T Consensus 303 ~k~~~~~ 309 (316)
T 1y7l_A 303 ERYLSTA 309 (316)
T ss_dssp SSCCCTT
T ss_pred cccCCcc
Confidence 9998874
No 18
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=7.5e-50 Score=421.90 Aligned_cols=305 Identities=14% Similarity=0.153 Sum_probs=259.1
Q ss_pred cCCccccccccccccCCCCcEEEecCCCC-CCCChhHHHHHHHHHHHHHHHhcC--------------CCce-EEEEeCC
Q 009957 165 GNSNLFWAERFGKQFLGMNDLWVKHCGIS-HTGSFKDLGMTVLVSQVNRLRKMK--------------RPVV-GVGCAST 228 (521)
Q Consensus 165 G~TPL~~~~~l~~~~lg~~~l~vK~E~~n-PTGSfKDRga~~~v~~a~~~~~~g--------------~~~~-~Vv~aSS 228 (521)
+.|||+++++|++. +|+.+||+|+|++| ||||||||++.+++..+... +.| .+.+ +|+++||
T Consensus 43 ~~TPL~~~~~l~~~-~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~-~~G~~~~~l~~e~l~~~~~~~~~vv~aSs 120 (398)
T 4d9i_A 43 RPTPLCALDDLANL-FGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCE-KYHLDIETLSFEHLKNAIGEKMTFATTTD 120 (398)
T ss_dssp CCCCEEECHHHHHH-HTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHH-HHTCCGGGCCHHHHHHCCSCCCEEEEECS
T ss_pred CCCCceehHHHHHH-hCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHH-hhcccccccchhhhhhhccCCCEEEEECC
Confidence 68999999999876 77668999999999 99999999999999887311 111 2245 8999999
Q ss_pred chHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCC-----CC---
Q 009957 229 GDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANS-----LN--- 300 (521)
Q Consensus 229 GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns-----~N--- 300 (521)
||||.|+|++|+++|++|+||||++ ++..|+.+++.+||+|+.++++|+++.+.+++++++.+++++++ ++
T Consensus 121 GNhg~a~A~aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~Vv~v~~~~~~a~~~a~~~~~~~g~~~v~~~~~~g~~~~~ 199 (398)
T 4d9i_A 121 GNHGRGVAWAAQQLGQNAVIYMPKG-SAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIP 199 (398)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEECTT-CCHHHHHHHHTTTCEEEECSSCHHHHHHHHHHHHHHHTCEECCSSCBTTBCHHH
T ss_pred CHHHHHHHHHHHHcCCCEEEEEeCC-CCHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHHcCCEEecCcccCCcCCCC
Confidence 9999999999999999999999997 78999999999999999999999999999999998888888884 43
Q ss_pred hHhHhhHHHHHHHHHHhcCC--CCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCc
Q 009957 301 SLRLEGQKTAAVEILQQFDW--EVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWK 378 (521)
Q Consensus 301 p~~i~G~~T~a~EI~eQl~~--~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~ 378 (521)
+..++||+|+++||++|+++ ..||+||+|+|+||+++|++++|+++ +| ++.++||+||+++++++.++++.|..
T Consensus 200 ~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~--~~--~~~~~vigVep~~~~~~~~s~~~g~~ 275 (398)
T 4d9i_A 200 TWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDV--YS--PQNLHSIIVEPDKADCIYRSGVKGDI 275 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHH--HC--TTSCEEEEEEETTSCHHHHHHHHTSC
T ss_pred chhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHh--cC--CCCCEEEEEEeCCCchHHHHHHcCCc
Confidence 67899999999999999963 24999999999999999999998764 23 25689999999999999999998852
Q ss_pred ceeecc-cccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcC----CeeccchHHHHHHHHHH-
Q 009957 379 DFKAVK-ASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTG----MFICPHTGVALTALIKL- 451 (521)
Q Consensus 379 ~~~~~~-~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eG----i~~ePssA~alAa~~~l- 451 (521)
.... ...|++++|+++.|... .+.+++++.+.++.|+|+|+++++++| +++| +++||+||++++|++++
T Consensus 276 --~~~~~~~~tia~gl~~~~p~~~--~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~eG~~~~i~~epssa~alaa~~~~~ 351 (398)
T 4d9i_A 276 --VNVGGDMATIMAGLACGEPNPL--GWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVH 351 (398)
T ss_dssp --CCC------CCTTCCCSSCCHH--HHHHHHHHCCEEEEECTHHHHHHHHHHHSCSTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred --eecCCCCCceeccccCCCCCHH--HHHHHHHcCCeEEEECHHHHHHHHHHHHHhhCCCCcEEECchHHHHHHHHHHhh
Confidence 3332 35799999999888754 356678889999999999999999997 7789 99999999999999987
Q ss_pred --------HhcCCCCCCCeEEEEeCCCCCCchHHHHhh
Q 009957 452 --------RNSGVIGPLDRTVVVSTAHGLKFTQSKIDY 481 (521)
Q Consensus 452 --------~~~g~i~~~~~vV~v~TG~g~K~~~~~~~~ 481 (521)
.+++.+.++++||+++|| |.++++.+.+.
T Consensus 352 ~~~~~~~l~~~~~~~~~~~Vv~i~tG-G~~d~~~~~~~ 388 (398)
T 4d9i_A 352 YHPQRQSLMEKLALNKDAVVLVISTE-GDTDVKHYREV 388 (398)
T ss_dssp HSTTHHHHHHHTTCCTTCEEEEEECB-CCSSHHHHHHH
T ss_pred hhhhhHHHHHhcCCCCCCEEEEEeCC-CCCCHHHHHHH
Confidence 456778889999999998 68988876443
No 19
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=2.2e-50 Score=414.58 Aligned_cols=292 Identities=17% Similarity=0.199 Sum_probs=252.5
Q ss_pred ccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHhcC
Q 009957 164 EGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAG 243 (521)
Q Consensus 164 eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~G 243 (521)
.|+|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+. .+ ..+|+++||||||.|+|++|++.|
T Consensus 24 i~~TPL~~~~~l~~~-~g~-~i~~K~E~~~ptGS~KdRga~~~i~~~~~~--~~--~~~vv~~ssGN~g~alA~~a~~~G 97 (323)
T 1v71_A 24 ANKTPVLTSSTVNKE-FVA-EVFFKCENFQKMGAFKFRGALNALSQLNEA--QR--KAGVLTFSSGNHAQAIALSAKILG 97 (323)
T ss_dssp SCCCCEECCHHHHHH-HTS-EEEEEEGGGSGGGBTHHHHHHHHHTTCCHH--HH--HHCEEECCSSHHHHHHHHHHHHTT
T ss_pred CCCCCceEhHhhHHH-hCC-eEEEEecCCCCcCCHHHHHHHHHHHHHHHh--cC--CCeEEEeCCCcHHHHHHHHHHHcC
Confidence 478999999988776 565 899999999999999999999998765321 11 357999999999999999999999
Q ss_pred CCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCCC-ChHhHhhHHHHHHHHHHhcCCCC
Q 009957 244 IPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANSL-NSLRLEGQKTAAVEILQQFDWEV 322 (521)
Q Consensus 244 i~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~~~ 322 (521)
++|+|+||++ ++..|+.+++.+||+|+.++++++++.+.+++++++.++++++++ ||.+++||+|+++||++|++ .
T Consensus 98 ~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~a~~l~~~~~~~~i~~~~n~~~~~g~~t~~~Ei~~q~~--~ 174 (323)
T 1v71_A 98 IPAKIIMPLD-APEAKVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIPPYDHPHVLAGQGTAAKELFEEVG--P 174 (323)
T ss_dssp CCEEEEEETT-CCHHHHHHHHHTTCEEEEECTTTTCHHHHHHHHHHHHTCBCCCSSSSHHHHHHHTHHHHHHHHHHC--C
T ss_pred CCEEEECCCC-CcHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHHHhcCCEecCCCCCcchhhhHhHHHHHHHHhcC--C
Confidence 9999999997 789999999999999999999999999999999888887778876 89999999999999999998 6
Q ss_pred CcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhhccCCCccHH
Q 009957 323 PDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAIQIGDPVSID 402 (521)
Q Consensus 323 pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i~i~~P~~~~ 402 (521)
+|+||+|+|+||+++|++++|+++ + +.+|||+||+++++++.++++.|+ +.......|++++|+++.|...
T Consensus 175 ~d~vv~~vG~GGt~~Gi~~~~k~~---~---~~~~vigve~~~~~~~~~~~~~g~--~~~~~~~~t~a~gl~~~~~~~~- 245 (323)
T 1v71_A 175 LDALFVCLGGGGLLSGSALAARHF---A---PNCEVYGVEPEAGNDGQQSFRKGS--IVHIDTPKTIADGAQTQHLGNY- 245 (323)
T ss_dssp CSEEEEECSSSHHHHHHHHHHHHH---C---TTCEEEEEEEGGGCHHHHHHHHTS--CCCCCCCCCSCTTSCCSSCCHH-
T ss_pred CCEEEEecCCcHHHHHHHHHHHHc---C---CCCEEEEEEeCCCchHHHHHHcCC--ceecCCCCcccccccCCCCcHH-
Confidence 999999999999999999998753 2 568999999999999999999885 3334445789999998877643
Q ss_pred HHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCchHHH
Q 009957 403 RAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLKFTQSK 478 (521)
Q Consensus 403 ~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K~~~~~ 478 (521)
.+..+++..+.++.|+|+|+++++++| +++|+++||++|++++|++++.++ + ++++||+++||++. +++.+
T Consensus 246 -~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a~alaa~~~~~~~--~-~~~~vv~i~tGg~~-~~~~~ 317 (323)
T 1v71_A 246 -TFSIIKEKVDDILTVSDEELIDCLKFYAARMKIVVEPTGCLSFAAARAMKEK--L-KNKRIGIIISGGNV-DIERY 317 (323)
T ss_dssp -HHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCCCCCGGGGHHHHHHHHTGGG--G-TTCEEEEEECBCCC-CHHHH
T ss_pred -HHHHHHHhCCEEEEECHHHHHHHHHHHHHhcCeEEcHHHHHHHHHHHHhHHh--c-CCCeEEEEeCCCCC-CHHHH
Confidence 345567788999999999999999997 789999999999999999987654 4 68899999999754 45544
No 20
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=3.1e-50 Score=434.14 Aligned_cols=292 Identities=18% Similarity=0.173 Sum_probs=257.8
Q ss_pred ccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHhcC
Q 009957 164 EGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAG 243 (521)
Q Consensus 164 eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~G 243 (521)
.+.|||+++++|++. +|. +||+|+|++|||||||||++.+++..+.. .+ +.++|+++|+||||+++|++|++.|
T Consensus 29 i~~TPL~~l~~Ls~~-~g~-~V~lK~E~lqPtgSfKdRgA~n~i~~l~~---~~-~~~gVV~aSsGNhg~avA~aa~~lG 102 (514)
T 1tdj_A 29 AQVTPLQKMEKLSSR-LDN-VILVKREDRQPVHSFKLRGAYAMMAGLTE---EQ-KAHGVITASAGNHAQGVAFSSARLG 102 (514)
T ss_dssp CCCCCEEECHHHHHH-TTS-EEEEECGGGSTTSSSTHHHHHHHHHTTTT---SS-CSSSCEEEECSSSHHHHHHHHHHTT
T ss_pred cCCCCcEEchhhHHh-hCC-eEEEEECCCCCcccHHHHHHHHHHHHHHH---hc-CCCEEEEECCcHHHHHHHHHHHHcC
Confidence 368999999998876 675 89999999999999999999998886532 12 2356999999999999999999999
Q ss_pred CCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCCC-ChHhHhhHHHHHHHHHHhcCCCC
Q 009957 244 IPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANSL-NSLRLEGQKTAAVEILQQFDWEV 322 (521)
Q Consensus 244 i~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~G~~T~a~EI~eQl~~~~ 322 (521)
++|+|+||.+ ++..|+.+++.+||+|+.++++||+|.+.+++++++.+++++|++ ||.+++||+|+++||++|+++
T Consensus 103 i~~~IvmP~~-~p~~Kv~~~r~~GAeVvlv~~~~dda~~~a~ela~e~g~~~v~pfdnp~~iaGqgTig~EI~eQl~~-- 179 (514)
T 1tdj_A 103 VKALIVMPTA-TADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAH-- 179 (514)
T ss_dssp CCEEEECCSS-CCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTT--
T ss_pred CcEEEEECCC-CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHhcCCEeeCCCCCHHHHHHHHHHHHHHHHHCCC--
Confidence 9999999997 789999999999999999999999999999999999899899987 899999999999999999983
Q ss_pred CcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhhccCCCccHH
Q 009957 323 PDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAIQIGDPVSID 402 (521)
Q Consensus 323 pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i~i~~P~~~~ 402 (521)
+|+||||+|+||+++|++++|+++ .|.+|||+||+++++++.++++.|. ....+...|+++|+.+..+...
T Consensus 180 ~D~vvvpvGgGGliaGia~~lk~~------~P~~kVIgVep~~a~~l~~sl~~G~--~~~l~~v~tiadGiav~~~g~~- 250 (514)
T 1tdj_A 180 LDRVFVPVGGGGLAAGVAVLIKQL------MPQIKVIAVEAEDSACLKAALDAGH--PVDLPRVGLFAEGVAVKRIGDE- 250 (514)
T ss_dssp CCEEEEECSSSHHHHHHHHHHHHH------CTTCEEEEEEETTTCHHHHHHHHTS--CCCCSCCCSSSSTTCCSSCCCH-
T ss_pred CCEEEEccCcHHHHHHHHHHHHHh------CCCCEEEEEeccCChhHHHHHhcCC--eeecCCccccccchhcCCCChH-
Confidence 999999999999999999988753 2678999999999999999999995 3344556799999998877544
Q ss_pred HHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCch
Q 009957 403 RAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLKFT 475 (521)
Q Consensus 403 ~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K~~ 475 (521)
.+..+++..+.++.|+|+|+.++++++ +++|+++||+||+++||++++.+++.+ ++++||+++||++.|+.
T Consensus 251 -~~~l~~~~vd~~v~Vsd~ei~~ai~~L~~~~givvEPsgA~alAal~~~~~~~~~-~g~~VV~I~tGgn~d~~ 322 (514)
T 1tdj_A 251 -TFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYIALHNI-RGERLAHILSGANVNFH 322 (514)
T ss_dssp -HHHHHTTSCCEEEEECHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHTC-CSCEEEEECCCCCCCTT
T ss_pred -HHHHHHHhCCeEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHHHHhcCC-CCCeEEEEEeCCCCCHH
Confidence 345678889999999999999999987 889999999999999999998765433 67899999999999975
No 21
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=5.7e-49 Score=400.68 Aligned_cols=285 Identities=18% Similarity=0.213 Sum_probs=238.1
Q ss_pred cccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCce--EEEEeCCchHHHHHHHHHH
Q 009957 163 FEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVV--GVGCASTGDTSAALSAYCA 240 (521)
Q Consensus 163 ~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~--~Vv~aSSGN~g~AlAa~aa 240 (521)
.+|+|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+..+... .. +|+++||||||.|+|++|+
T Consensus 6 ~~~~TPL~~~~~l~~~-~g~-~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~-g~~~~vv~assGN~g~a~A~~a~ 82 (304)
T 1ve1_A 6 AIGKTPVVRLAKVVEP-DMA-EVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRP-GSGQVIVEPTSGNTGIGLAMIAA 82 (304)
T ss_dssp GCCCCCEEECCSSSCT-TSC-EEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCT-TSCCEEEESCCSHHHHHHHHHHH
T ss_pred hcCCCCcEECcccccc-cCC-EEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCC-CCccEEEEeCCcHHHHHHHHHHH
Confidence 4689999999998876 664 89999999999999999999999887643211111 14 7999999999999999999
Q ss_pred hcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC--HHHHHHHHHHHHhcCCccccCC-CChHhHhh-HHHHHHHHHH
Q 009957 241 SAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD--FDGCMKLIREVTSELPIYLANS-LNSLRLEG-QKTAAVEILQ 316 (521)
Q Consensus 241 ~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~--~dd~~~~~~~~~~~~~~~~~ns-~Np~~i~G-~~T~a~EI~e 316 (521)
+.|++|+||||++ ++..|+.+++.+||+|+.++++ ++++++.+++++++.+++++++ .||.+++| |+|+++||++
T Consensus 83 ~~G~~~~i~~p~~-~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~n~~~~~g~~~t~~~Ei~~ 161 (304)
T 1ve1_A 83 SRGYRLILTMPAQ-MSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEELGAFMPDQFKNPANVRAHYETTGPELYE 161 (304)
T ss_dssp HHTCEEEEEEETT-CCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHHTCBCCCTTTCHHHHHHHHHTHHHHHHH
T ss_pred HcCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhcCCCEeCCCCCChhHHHHHHHHHHHHHHH
Confidence 9999999999997 7999999999999999999987 9999999999988877777776 48999999 5999999999
Q ss_pred hcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhhccC
Q 009957 317 QFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAIQIG 396 (521)
Q Consensus 317 Ql~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i~i~ 396 (521)
|+++ .||+||+|+|+||+++|++++|+++ .+.+|||+||+++++.+. .|. ....+ .++|+.+
T Consensus 162 q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~------~~~~~vi~ve~~~~~~~~----~g~------~~~~~-~~gl~~~ 223 (304)
T 1ve1_A 162 ALEG-RIDAFVYGSGTGGTITGVGRYLKER------IPHVKVIAVEPARSNVLS----GGK------MGQHG-FQGMGPG 223 (304)
T ss_dssp HTTT-CCSEEEEECSSSHHHHHHHHHHHTT------CTTCEEEEEEEGGGCTTT----TCC------CCCCS-CTTSCCS
T ss_pred HcCC-CCCEEEEecCCchhHHHHHHHHHHh------CCCCEEEEEecCCCcccc----CCC------CCCcc-cCCCCCC
Confidence 9985 5999999999999999999988753 267899999999976543 332 11123 3677654
Q ss_pred C-CccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCc
Q 009957 397 D-PVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLKF 474 (521)
Q Consensus 397 ~-P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K~ 474 (521)
. |.++ .+...+.++.|+|+|+++++++| +++|+++||++|++++|++++.++ +.++++||+++||+|.||
T Consensus 224 ~~~~~~------~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~~~~--~~~~~~vv~i~tg~g~ky 295 (304)
T 1ve1_A 224 FIPENL------DLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQVARE--LGPGKRVACISPDGGWKY 295 (304)
T ss_dssp SCCTTC------CGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHH--HCTTCEEEEEECBBSGGG
T ss_pred CCChhh------hhhhCCEEEEECHHHHHHHHHHHHHHhCcEEcHHHHHHHHHHHHHHHh--cCCCCeEEEEECCCCccC
Confidence 2 3322 23456779999999999999997 789999999999999999998765 346789999999999999
Q ss_pred hHH
Q 009957 475 TQS 477 (521)
Q Consensus 475 ~~~ 477 (521)
.++
T Consensus 296 ~~~ 298 (304)
T 1ve1_A 296 LST 298 (304)
T ss_dssp TTS
T ss_pred CCc
Confidence 886
No 22
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=6e-49 Score=402.08 Aligned_cols=290 Identities=18% Similarity=0.204 Sum_probs=238.3
Q ss_pred hcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHH
Q 009957 160 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYC 239 (521)
Q Consensus 160 vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 239 (521)
++..+|+|||++++++++. +|. +||+|+|++|||||||||++.+++..+.+..+.. +..+|+++||||||.|+|++|
T Consensus 10 i~~~~~~TPL~~~~~l~~~-~g~-~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~-~g~~vv~assGN~g~alA~~a 86 (313)
T 2q3b_A 10 ITQLIGRTPLVRLRRVTDG-AVA-DIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIK-PDTIILEPTSGNTGIALAMVC 86 (313)
T ss_dssp GGGGSCCCCEEECSSSCTT-CCS-EEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCC-TTCEEEEECSSHHHHHHHHHH
T ss_pred HHHhcCCCceEECcccccc-cCc-EEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCC-CCCEEEEeCCCHHHHHHHHHH
Confidence 4567899999999998876 554 8999999999999999999999988764321111 125799999999999999999
Q ss_pred HhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC--CHHHHHHHHHHHHhcCCc-cccCCC-ChHhHhh-HHHHHHHH
Q 009957 240 ASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT--DFDGCMKLIREVTSELPI-YLANSL-NSLRLEG-QKTAAVEI 314 (521)
Q Consensus 240 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~~~~~~~~~~~~~~-~~~ns~-Np~~i~G-~~T~a~EI 314 (521)
++.|++|+||||++ ++..|+.+++.+||+|+.+++ +++++++.+++++++.++ ++.+++ ||.+++| |+|+++||
T Consensus 87 ~~~G~~~~iv~p~~-~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~~Ei 165 (313)
T 2q3b_A 87 AARGYRCVLTMPET-MSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEV 165 (313)
T ss_dssp HHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHHHHH
T ss_pred HHcCCcEEEEECCC-CCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHHHHH
Confidence 99999999999997 799999999999999999987 588999999999988776 777775 8999866 99999999
Q ss_pred HHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhhc
Q 009957 315 LQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAIQ 394 (521)
Q Consensus 315 ~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i~ 394 (521)
++|+++ .||+||+|+|+||+++|++++|+++ + +.+|||+||+++++.+.. ++.| .+..+++.
T Consensus 166 ~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~---~---~~~~vi~ve~~~~~~~~~-~~~g----------~~~~~g~~ 227 (313)
T 2q3b_A 166 WRDTDG-KVDIVVAGVGTGGTITGVAQVIKER---K---PSARFVAVEPAASPVLSG-GQKG----------PHPIQGIG 227 (313)
T ss_dssp HHHTTT-CCCEEEEECSSSHHHHHHHHHHHHH---C---TTCEEEEEEETTSCTTTT-CCCC----------CCCCTTSC
T ss_pred HHHcCC-CCCEEEEccCcchhHHHHHHHHHHh---C---CCCEEEEEeeCCCccccC-CCCC----------CcccCCcC
Confidence 999975 5999999999999999999998753 2 568999999999766532 1222 23456665
Q ss_pred cC-CCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCC
Q 009957 395 IG-DPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGL 472 (521)
Q Consensus 395 i~-~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~ 472 (521)
.+ .|.++. +...+.++.|+|+|+++++++| +++|+++||++|++++|++++.+++.. ++++||+++||+|.
T Consensus 228 ~~~~~~~~~------~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~~~-~~~~vv~v~~~~g~ 300 (313)
T 2q3b_A 228 AGFVPPVLD------QDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPEN-AGKLIVVVLPDFGE 300 (313)
T ss_dssp CSSCCTTCC------GGGCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHTCGGG-TTCEEEEEECBBSG
T ss_pred CCCCChhhh------HhhccEEEEECHHHHHHHHHHHHHHcCceEchHHHHHHHHHHHHHHhcCC-CCCEEEEEECCCCc
Confidence 44 244322 2345678999999999999997 789999999999999999998765422 67899999999999
Q ss_pred CchHHH
Q 009957 473 KFTQSK 478 (521)
Q Consensus 473 K~~~~~ 478 (521)
||.+++
T Consensus 301 ky~~~~ 306 (313)
T 2q3b_A 301 RYLSTP 306 (313)
T ss_dssp GGC---
T ss_pred ccccch
Confidence 999875
No 23
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=5.6e-49 Score=400.75 Aligned_cols=284 Identities=19% Similarity=0.237 Sum_probs=237.7
Q ss_pred hhhcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHH
Q 009957 158 DIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSA 237 (521)
Q Consensus 158 ~~vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa 237 (521)
+.++..+++|||+++++++ .+||+|+|++|||||||||++.+++..+.+ .|.....|+++||||||.|+|+
T Consensus 12 ~~~~~~~~~TPL~~l~~l~------~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~---~g~~~~~vv~aSsGN~g~a~A~ 82 (303)
T 1o58_A 12 HMMERLIGSTPIVRLDSID------SRIFLKLEKNNPGGSVKDRPALFMILDAEK---RGLLKNGIVEPTSGNMGIAIAM 82 (303)
T ss_dssp CHHHHHSCCCCEEECTTTC------TTEEEEEGGGSTTSBTTHHHHHHHHHHHHH---TTCCTTCEEEECSSHHHHHHHH
T ss_pred hhhhhccCCCCeEECccCC------ceEEEEecCCCCCCChHHHHHHHHHHHHHH---cCCCCCCEEEECchHHHHHHHH
Confidence 4567889999999988764 379999999999999999999999887643 3431134889999999999999
Q ss_pred HHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC--HHHHHHHHHHHHhcCCccccCCC-ChHhHh-hHHHHHHH
Q 009957 238 YCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD--FDGCMKLIREVTSELPIYLANSL-NSLRLE-GQKTAAVE 313 (521)
Q Consensus 238 ~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~--~dd~~~~~~~~~~~~~~~~~ns~-Np~~i~-G~~T~a~E 313 (521)
+|+++|++|+||||++ ++..|+.+++.+||+|+.++++ |+++++.+++++++.++|+++++ ||..++ ||+|+++|
T Consensus 83 aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 161 (303)
T 1o58_A 83 IGAKRGHRVILTMPET-MSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRETGAHMLNQFENPYNVYSHQFTTGPE 161 (303)
T ss_dssp HHHHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHHCCBCCCTTTCHHHHHHHHHTHHHH
T ss_pred HHHHcCCcEEEEECCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhcCeEeCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999997 7999999999999999999987 99999999999888787777774 888765 78999999
Q ss_pred HHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCC-CeEEEeccCCCchhhHHHhhCCcceeecccccchhhh
Q 009957 314 ILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRM-PRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASA 392 (521)
Q Consensus 314 I~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~-prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~ 392 (521)
|++|+++ .||+||+|+|+||+++|++++|+++. +. +|||+||+++++.+.. |.. ..+..++
T Consensus 162 i~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~~------p~~~~vigve~~~~~~~~~----g~~-------~~~~~~g 223 (303)
T 1o58_A 162 ILKQMDY-QIDAFVAGVGTGGTISGVGRVLKGFF------GNGVKIVAVEPAKSPVLSG----GQP-------GKHAIQG 223 (303)
T ss_dssp HHHHTTT-CCSEEEEECSSSHHHHHHHHHHHHHH------GGGSEEEEEEETTSCTTTT----CCC-------CCCCCTT
T ss_pred HHHHcCC-CCCEEEEeeCCcccHHHHHHHHHHhC------CCCCEEEEEecCCCccccC----CCC-------CCeecCc
Confidence 9999985 59999999999999999999998753 45 7999999999866652 321 1234456
Q ss_pred hccCC-CccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCC
Q 009957 393 IQIGD-PVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAH 470 (521)
Q Consensus 393 i~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~ 470 (521)
+..+. |..+ .+...+.++.|+|+|+++++++| +++|+++||++|++++|++++.++ +.++++||+++||+
T Consensus 224 i~~~~~~~~~------~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~--~~~~~~vv~i~tg~ 295 (303)
T 1o58_A 224 IGAGFVPKIL------DRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAAALKVAQK--LGPDARVVTVAPDH 295 (303)
T ss_dssp SCCSSCCTTC------CGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHT--SCTTCCEEEEECBB
T ss_pred CCCCCcCHHH------HHHhCCeEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHH--cCCCCEEEEEECCC
Confidence 65432 3222 13456789999999999999997 789999999999999999998765 45788999999999
Q ss_pred CCCchHH
Q 009957 471 GLKFTQS 477 (521)
Q Consensus 471 g~K~~~~ 477 (521)
|.||.++
T Consensus 296 g~ky~~~ 302 (303)
T 1o58_A 296 AERYLSI 302 (303)
T ss_dssp GGGCTTT
T ss_pred CcccccC
Confidence 9999875
No 24
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=9e-49 Score=404.54 Aligned_cols=290 Identities=17% Similarity=0.184 Sum_probs=240.5
Q ss_pred hcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHH
Q 009957 160 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYC 239 (521)
Q Consensus 160 vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 239 (521)
+....|+|||++++++ .. +| .+||+|+|++|||||||||++.+++..+.+...+..+...|+++||||||.|+|++|
T Consensus 15 i~~~ig~TPL~~l~~l-~~-~g-~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~alA~aa 91 (334)
T 3tbh_A 15 IDQLIGQTPALYLNKL-NN-TK-AKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLAHLG 91 (334)
T ss_dssp GGGGSSCCCEEECCTT-CC-SS-SEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHH
T ss_pred HHHhcCCCCeEECCcc-cC-CC-CEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHHHHHHH
Confidence 5667899999999998 55 56 489999999999999999999999987654322111222259999999999999999
Q ss_pred HhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC--HHHHHHHHHHHHhcC-CccccCCC-ChHh-HhhHHHHHHHH
Q 009957 240 ASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD--FDGCMKLIREVTSEL-PIYLANSL-NSLR-LEGQKTAAVEI 314 (521)
Q Consensus 240 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~--~dd~~~~~~~~~~~~-~~~~~ns~-Np~~-i~G~~T~a~EI 314 (521)
+++|++|+||||++ ++..|+.+++.+||+|+.++++ ++++++.+++++++. ++++++++ ||.+ ..||.|+++||
T Consensus 92 ~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~t~~~Ei 170 (334)
T 3tbh_A 92 AIRGYKVIITMPES-MSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEI 170 (334)
T ss_dssp HHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHHTHHHHH
T ss_pred HHhCCCEEEEECCC-CCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHHHHHHHH
Confidence 99999999999997 7899999999999999999875 899999999998887 78888876 7884 66899999999
Q ss_pred HHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhhc
Q 009957 315 LQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAIQ 394 (521)
Q Consensus 315 ~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i~ 394 (521)
++|+++ .||+||+|+|+||+++|++++|+++ .+.+|||+||+++++.+. .|.. . .+..+++.
T Consensus 171 ~~q~~~-~~d~vv~pvG~GG~~aGi~~~~k~~------~p~~~vigVe~~~~~~~~----~g~~--~-----~~~~~gi~ 232 (334)
T 3tbh_A 171 WEQTNH-NVDCFIAGVGTGGTLTGVARALKKM------GSHARIVAVEPTESPVLS----GGKP--G-----PHKIQGIG 232 (334)
T ss_dssp HHHTTS-CCSEEEEECSSSHHHHHHHHHHHHT------TCCCEEEEEEETTSCTTT----TCCC--C-----CCSCTTSC
T ss_pred HHHhCC-CCCEEEeccCCcHhHHHHHHHHHHh------CCCCEEEEEeeCCchHhh----CCCc--C-----CeecCCCC
Confidence 999975 7999999999999999999998763 367899999999987664 3421 1 12234554
Q ss_pred cCC-CccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCC
Q 009957 395 IGD-PVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGL 472 (521)
Q Consensus 395 i~~-P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~ 472 (521)
.+. |.++ .++..+.++.|+|+|+++++++| +++|+++||++|++++|++++.+++ +.++++||+++||+|.
T Consensus 233 ~~~~~~~~------~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssgaa~aa~~~~~~~~-~~~g~~Vv~v~t~~g~ 305 (334)
T 3tbh_A 233 PGFVPDVL------DRSLIDEVLCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKIAERP-EMEGKTIVTVIPSFGE 305 (334)
T ss_dssp CSSCCTTC------CGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHSG-GGTTCEEEEEECBBGG
T ss_pred CCcCCHHH------HHHhCCEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHHHHHHHhc-cCCcCeEEEEECCCCc
Confidence 332 3322 24567889999999999999997 7899999999999999999988765 5678999999999999
Q ss_pred CchHHH
Q 009957 473 KFTQSK 478 (521)
Q Consensus 473 K~~~~~ 478 (521)
||.+++
T Consensus 306 ky~~~~ 311 (334)
T 3tbh_A 306 RYLSTT 311 (334)
T ss_dssp GGTTSG
T ss_pred cccCch
Confidence 999874
No 25
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=1.7e-48 Score=397.24 Aligned_cols=281 Identities=19% Similarity=0.228 Sum_probs=233.5
Q ss_pred hcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHH
Q 009957 160 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYC 239 (521)
Q Consensus 160 vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 239 (521)
+....|+|||++++++++. +| .+||+|+|++|||||||||++.+++..+.+..+.. +..+|+++||||||.|+|++|
T Consensus 4 i~~~~~~TPL~~~~~l~~~-~g-~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~-~g~~vv~~ssGN~g~a~A~~a 80 (303)
T 2v03_A 4 LEQTIGNTPLVKLQRMGPD-NG-SEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIK-PGDVLIEATSGNTGIALAMIA 80 (303)
T ss_dssp GGGGSSCCCEEECSSSSCS-SS-CEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCC-TTCEEEEECSSHHHHHHHHHH
T ss_pred hHhhcCCCCcEECcccccc-cC-CEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCC-CCCEEEEECCcHHHHHHHHHH
Confidence 4556899999999999876 66 48999999999999999999999988764321111 125799999999999999999
Q ss_pred HhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC--CHHHHHHHHHHHHhc-CCccccCCC-ChHhHh-hHHHHHHHH
Q 009957 240 ASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT--DFDGCMKLIREVTSE-LPIYLANSL-NSLRLE-GQKTAAVEI 314 (521)
Q Consensus 240 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~~~~~~~~~~~-~~~~~~ns~-Np~~i~-G~~T~a~EI 314 (521)
++.|++|+||||++ ++..|+.+++.+||+|+.+++ +++++++.+++++++ .++ +.+++ ||.+++ ||+|+++||
T Consensus 81 ~~~G~~~~iv~p~~-~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei 158 (303)
T 2v03_A 81 ALKGYRMKLLMPDN-MSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEI 158 (303)
T ss_dssp HHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHH
T ss_pred HHcCCcEEEEECCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHH
Confidence 99999999999997 799999999999999999986 599999999999888 466 67764 888876 789999999
Q ss_pred HHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhhc
Q 009957 315 LQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAIQ 394 (521)
Q Consensus 315 ~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i~ 394 (521)
++|+++ .||+||+|+|+||+++|++++|+++ .+.+|||+||+++++++.. + .| +..+.
T Consensus 159 ~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~------~p~~~vigve~~~~~~~~~-~-~g------------l~~~~- 216 (303)
T 2v03_A 159 WQQTGG-RITHFVSSMGTTGTITGVSRFMREQ------SKPVTIVGLQPEEGSSIPG-I-RR------------WPTEY- 216 (303)
T ss_dssp HHHTTT-CCCEEEEECSSSHHHHHHHHHHHTS------SSCCEEEEEEECTTCCCTT-C-CC------------CCGGG-
T ss_pred HHHhCC-CCCEEEEEeCccHhHHHHHHHHHHh------CCCCEEEEEcCCCCccccc-C-Cc------------CCCCC-
Confidence 999985 5999999999999999999988752 3678999999999876653 1 11 11110
Q ss_pred cCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCC
Q 009957 395 IGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLK 473 (521)
Q Consensus 395 i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K 473 (521)
.|..+ .+...+.++.|+|+|+++++++| +++|+++||+||++++|++++.+++ ++++||+++||++.|
T Consensus 217 --~~~~~------~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~~pssa~alaa~~~~~~~~---~~~~vv~i~tg~~~k 285 (303)
T 2v03_A 217 --LPGIF------NASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAAAN---PDAVVVAIICDRGDR 285 (303)
T ss_dssp --CCTTC------CGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHS---TTCEEEEEECBBSGG
T ss_pred --CCccc------chHHCCEEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHHC---CCCeEEEEECCCCcc
Confidence 12211 12345679999999999999997 7899999999999999999988764 678999999999999
Q ss_pred chHHH
Q 009957 474 FTQSK 478 (521)
Q Consensus 474 ~~~~~ 478 (521)
|.+++
T Consensus 286 y~~~~ 290 (303)
T 2v03_A 286 YLSTG 290 (303)
T ss_dssp GGGGT
T ss_pred cccch
Confidence 99874
No 26
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=1.2e-48 Score=401.39 Aligned_cols=288 Identities=18% Similarity=0.160 Sum_probs=239.6
Q ss_pred hcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCC---CceEEEEeCCchHHHHHH
Q 009957 160 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR---PVVGVGCASTGDTSAALS 236 (521)
Q Consensus 160 vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~---~~~~Vv~aSSGN~g~AlA 236 (521)
+++.+|+|||++++++++. +| .+||+|+|++|||||||||++.+++..+.+ .|. +..+|+++||||||.|+|
T Consensus 9 i~~~~~~TPL~~~~~l~~~-~g-~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~---~G~~~~~~~~vv~assGN~g~alA 83 (322)
T 1z7w_A 9 VTELIGNTPLVYLNNVAEG-CV-GRVAAKLEMMEPCSSVKDRIGFSMISDAEK---KGLIKPGESVLIEPTSGNTGVGLA 83 (322)
T ss_dssp GGGGSSCCCEEECCGGGTT-CS-SEEEEEEGGGSTTSBTHHHHHHHHHHHHHH---TTSCCTTTCEEEEECSSHHHHHHH
T ss_pred HHHhcCCCCeEECcccccc-CC-ceEEEEecccCCCCchHHHHHHHHHHHHHH---cCCCCCCCCEEEEeCCCHHHHHHH
Confidence 5678899999999998875 55 489999999999999999999999987643 342 125899999999999999
Q ss_pred HHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC--HHHHHHHHHHHHhcC-CccccCCC-ChHhH-hhHHHHH
Q 009957 237 AYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD--FDGCMKLIREVTSEL-PIYLANSL-NSLRL-EGQKTAA 311 (521)
Q Consensus 237 a~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~--~dd~~~~~~~~~~~~-~~~~~ns~-Np~~i-~G~~T~a 311 (521)
++|+++|++|+||+|++ ++..|+.+++.+||+|+.++++ ++++.+.+++++++. ++++++++ ||.++ .||+|++
T Consensus 84 ~aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~ 162 (322)
T 1z7w_A 84 FTAAAKGYKLIITMPAS-MSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTG 162 (322)
T ss_dssp HHHHHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHH
T ss_pred HHHHHcCCCEEEEeCCC-CCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHH
Confidence 99999999999999997 7999999999999999999874 789999999999887 77888775 67764 5899999
Q ss_pred HHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhh
Q 009957 312 VEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFAS 391 (521)
Q Consensus 312 ~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~ 391 (521)
+||++|+++ .||+||+|+|+||+++|++++|+++ .|.+|||+||+++++.+. .|. . ...+ .+
T Consensus 163 ~Ei~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~------~p~~~vigve~~~~~~~~----~~~--~----~~~~-~~ 224 (322)
T 1z7w_A 163 PEIWKGTGG-KIDGFVSGIGTGGTITGAGKYLKEQ------NANVKLYGVEPVESAILS----GGK--P----GPHK-IQ 224 (322)
T ss_dssp HHHHHHTTT-CCCEEEEECSSSHHHHHHHHHHHHH------CTTCEEEEEEEGGGCGGG----TCC--C----CCCS-CT
T ss_pred HHHHHHhcC-CCCEEEEecCccHhHHHHHHHHHHc------CCCCEEEEEecCCCcccc----CCC--C----CCcc-cC
Confidence 999999974 6999999999999999999998864 267899999999977653 232 1 1112 35
Q ss_pred hhccCC-CccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCC
Q 009957 392 AIQIGD-PVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTA 469 (521)
Q Consensus 392 ~i~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG 469 (521)
++.++. |..+ .+...+.++.|+|+|+++++++| +++|+++||++|++++|++++.+++. .++++||+++||
T Consensus 225 gl~~~~~~~~~------~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~~pssga~~aaa~~~~~~~~-~~~~~vv~i~tg 297 (322)
T 1z7w_A 225 GIGAGFIPSVL------NVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPE-NAGKLFVAIFPS 297 (322)
T ss_dssp TSCCSSCCTTC------CGGGCSEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHTSGG-GTTCEEEEEECB
T ss_pred cCcCCCCChhh------hHHhCCEEEEECHHHHHHHHHHHHHHcCceEchhHHHHHHHHHHHHHhcC-CCCCeEEEEECC
Confidence 665543 2221 24456789999999999999997 78999999999999999998876542 367899999999
Q ss_pred CCCCchHHH
Q 009957 470 HGLKFTQSK 478 (521)
Q Consensus 470 ~g~K~~~~~ 478 (521)
+|.||.+++
T Consensus 298 ~g~k~~~~~ 306 (322)
T 1z7w_A 298 FGERYLSTV 306 (322)
T ss_dssp BGGGGTTSG
T ss_pred CCcccccch
Confidence 999998874
No 27
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=3.9e-49 Score=402.62 Aligned_cols=289 Identities=18% Similarity=0.202 Sum_probs=220.6
Q ss_pred hcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHH
Q 009957 160 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYC 239 (521)
Q Consensus 160 vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 239 (521)
++..+|+|||++++++++. +| .+||+|+|++|||||||||++.+++..+.+..+.. +..+|+++||||||.|+|++|
T Consensus 8 i~~~~~~TPL~~l~~l~~~-~g-~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~-~g~~vv~assGN~g~a~A~~a 84 (308)
T 2egu_A 8 ITELIGDTPAVKLNRIVDE-DS-ADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLK-PGDTIVEPTSGNTGIGLAMVA 84 (308)
T ss_dssp GGGGSSCCCEEECCSSSCT-TS-CEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCC-TTCEEEEECCHHHHHHHHHHH
T ss_pred HHHhcCCCCeEECCccccc-CC-CEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCC-CCCEEEEeCCCHHHHHHHHHH
Confidence 4567889999999998876 66 48999999999999999999999988764321111 115799999999999999999
Q ss_pred HhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC--CHHHHHHHHHHHHhcCCccccCCC-ChHhH-hhHHHHHHHHH
Q 009957 240 ASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT--DFDGCMKLIREVTSELPIYLANSL-NSLRL-EGQKTAAVEIL 315 (521)
Q Consensus 240 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~~~~~~~~~~~~~~~~~ns~-Np~~i-~G~~T~a~EI~ 315 (521)
++.|++|+||||++ ++..|+.+++.+||+|+.+++ +++++.+.+++++++.++++.+++ ||..+ .||+|+++||+
T Consensus 85 ~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~ 163 (308)
T 2egu_A 85 AAKGYKAVLVMPDT-MSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREHGYFMPQQFKNEANPEIHRLTTGKEIV 163 (308)
T ss_dssp HHHTCEEEEEEESC-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHHCCBCC--------------CHHHHHH
T ss_pred HHcCCCEEEEECCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHCcCCcCCcCCChhHHHHHHHHHHHHHH
Confidence 99999999999997 789999999999999999987 478999999999988887777775 78764 79999999999
Q ss_pred HhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhhcc
Q 009957 316 QQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAIQI 395 (521)
Q Consensus 316 eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i~i 395 (521)
+|+++ .||+||+|+|+||+++|++++|+++ + +.+|||+||+++++.+. ..+.+ .+..++++.
T Consensus 164 ~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~---~---~~~~vigve~~~~~~~~-~~~~~----------~~~~~g~~~ 225 (308)
T 2egu_A 164 EQMGD-QLDAFVAGVGTGGTITGAGKVLREA---Y---PNIKIYAVEPADSPVLS-GGKPG----------PHKIQGIGA 225 (308)
T ss_dssp HHHTT-CCCEEEEEGGGTHHHHHHHHHHHHH---C---TTCEEEEEEECC------------------------------
T ss_pred HHcCC-CCCEEEEeeCCchhHHHHHHHHHHh---C---CCCEEEEEEeCCCcccc-CCCCC----------CcccCccCC
Confidence 99985 5999999999999999999998753 2 56899999999975543 22211 233455554
Q ss_pred CC-CccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCC
Q 009957 396 GD-PVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLK 473 (521)
Q Consensus 396 ~~-P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K 473 (521)
+. |.++ .+...+.++.|+|+|+++++++| +++|+++||+||++++|++++.+++ .++++||+++||+|.|
T Consensus 226 ~~~~~~~------~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~epssa~a~aa~~~~~~~~--~~~~~vv~i~tg~g~k 297 (308)
T 2egu_A 226 GFVPDIL------DTSIYDGVITVTTEEAFAAARRAAREEGILGGISSGAAIHAALKVAKEL--GKGKKVLAIIPSNGER 297 (308)
T ss_dssp ----CCC------CCCSCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHH--CTTCEEEEEECBBGGG
T ss_pred CCCCHhH------HHHhcCeEEEECHHHHHHHHHHHHHHhCceEcHHHHHHHHHHHHHHHhc--CCCCeEEEEECCCCcc
Confidence 32 2221 13345678999999999999997 7899999999999999999987764 4688999999999999
Q ss_pred chHHH
Q 009957 474 FTQSK 478 (521)
Q Consensus 474 ~~~~~ 478 (521)
|.+++
T Consensus 298 y~~~~ 302 (308)
T 2egu_A 298 YLSTP 302 (308)
T ss_dssp GTTSS
T ss_pred cccch
Confidence 98874
No 28
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=1.3e-48 Score=404.86 Aligned_cols=290 Identities=18% Similarity=0.160 Sum_probs=240.6
Q ss_pred hhcccccCCcccccccccc----ccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHH
Q 009957 159 IVSAFEGNSNLFWAERFGK----QFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAA 234 (521)
Q Consensus 159 ~vsl~eG~TPL~~~~~l~~----~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~A 234 (521)
.++...|+|||++++++++ . +|. +||+|+|++|||||||||++.+++..+.+.....+ ..+|+++||||||.|
T Consensus 16 ~i~~~~g~TPL~~~~~l~~~~~~~-~g~-~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~-g~~vv~aSsGN~g~a 92 (343)
T 2pqm_A 16 NILETIGGTPLVELHGVTEHPRIK-KGT-RILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKP-GMEIIESTSGNTGIA 92 (343)
T ss_dssp SGGGGSSCCCEEECCGGGCSTTSC-TTC-EEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCT-TCEEEEECSSHHHHH
T ss_pred HHHhhcCCCCeEECCccccccccc-cCc-EEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCC-CCEEEEECCcHHHHH
Confidence 3567889999999999886 5 564 89999999999999999999999988754322111 157999999999999
Q ss_pred HHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC--CHHHHHHHHHHHHhcCCc--cccCCC-ChHhH-hhHH
Q 009957 235 LSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT--DFDGCMKLIREVTSELPI--YLANSL-NSLRL-EGQK 308 (521)
Q Consensus 235 lAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~~~~~~~~~~~~~~--~~~ns~-Np~~i-~G~~ 308 (521)
+|++|++.|++|+||||++ ++..|+.+++.+||+|+.+++ +++++.+.+++++++.+. |+++++ ||.++ .||+
T Consensus 93 lA~aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~~g~~ 171 (343)
T 2pqm_A 93 LCQAGAVFGYRVNIAMPST-MSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHY 171 (343)
T ss_dssp HHHHHHHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEECCC-CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhHHHHHHH
Confidence 9999999999999999997 799999999999999999997 489999999999888764 666775 88864 7899
Q ss_pred HHHHHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccc
Q 009957 309 TAAVEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTT 388 (521)
Q Consensus 309 T~a~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~T 388 (521)
|++ ||++|+++ .||+||+|+|+||+++|++++|+++ + +.+|||+||+++++.+.. .+.| .+
T Consensus 172 t~~-Ei~~q~~~-~~d~vvvpvG~GG~~~Gi~~~~k~~---~---p~~~vigVe~~~~~~~~~-~~~~----------~~ 232 (343)
T 2pqm_A 172 TAN-EIWEDTDG-EVDIVVSAVGTSGTVIGVAEKLKEK---K---KGIKIIAVEPEESAVLEG-KAKG----------PH 232 (343)
T ss_dssp HHH-HHHHHTTT-CEEEEEEECSSSHHHHHHHHHHHHH---C---TTCEEEEEEEGGGCTTTT-CCCC----------CC
T ss_pred HHH-HHHHHcCC-CCCEEEEecCCchhHHHHHHHHHHc---C---CCCEEEEEecCCCccccc-CCCC----------Ce
Confidence 999 99999985 6999999999999999999998864 2 578999999999765541 1111 24
Q ss_pred hhhhhccCC-CccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEE
Q 009957 389 FASAIQIGD-PVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVV 466 (521)
Q Consensus 389 ia~~i~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v 466 (521)
.+++++.+. |.++ .+...+.++.|+|+|+++++++| +++|+++||+||++++|++++.+++ ..++++||++
T Consensus 233 ~~~gl~~~~~~~~~------~~~~~d~~~~Vsd~e~~~a~~~l~~~~gi~~epssa~alaa~~~~~~~~-~~~~~~vv~i 305 (343)
T 2pqm_A 233 GIQGIGAGFIPDIY------KKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILAGLKEAEKP-ENEGKTIVII 305 (343)
T ss_dssp CCTTCCCSSCCTTC------CGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSG-GGTTCEEEEE
T ss_pred ecCccCCCCCCHHH------HHHhCCeEEEECHHHHHHHHHHHHHHhCCeEchhHHHHHHHHHHHHHhc-CCCCCeEEEE
Confidence 456666442 3322 23456789999999999999997 7899999999999999999987664 3468899999
Q ss_pred eCCCCCCchHHH
Q 009957 467 STAHGLKFTQSK 478 (521)
Q Consensus 467 ~TG~g~K~~~~~ 478 (521)
+||+|.||.+++
T Consensus 306 ~tg~g~ky~~~~ 317 (343)
T 2pqm_A 306 VPSCGERYLSTD 317 (343)
T ss_dssp ECBBGGGGTTSS
T ss_pred EcCCCccccchh
Confidence 999999999874
No 29
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=3.1e-48 Score=399.12 Aligned_cols=282 Identities=16% Similarity=0.182 Sum_probs=234.1
Q ss_pred cccCCcccccccccccc------CCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHH
Q 009957 163 FEGNSNLFWAERFGKQF------LGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALS 236 (521)
Q Consensus 163 ~eG~TPL~~~~~l~~~~------lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlA 236 (521)
..|+|||++++++++.. .| .+||+|+|++|||||||||++.+++..+.+..... +..+|+++||||||.|+|
T Consensus 12 ~ig~TPL~~~~~l~~~~~~~~~~~g-~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~-~~~~vv~aSsGN~g~alA 89 (325)
T 3dwg_A 12 ALGNTPLVGLQRLSPRWDDGRDGPH-VRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLR-PGATILEPTSGNTGISLA 89 (325)
T ss_dssp GCSCCCEEECTTTSSBSSCBTTBCC-EEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCC-TTCEEEEECSSHHHHHHH
T ss_pred hcCCCCcEEccccchhhcccccCCC-cEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCC-CCCEEEEeCCcHHHHHHH
Confidence 45889999999987641 23 48999999999999999999999998765432111 125799999999999999
Q ss_pred HHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC--CHHHHHHHHHHHHhcCC-ccccCCC-ChHhH-hhHHHHH
Q 009957 237 AYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT--DFDGCMKLIREVTSELP-IYLANSL-NSLRL-EGQKTAA 311 (521)
Q Consensus 237 a~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~~~~~~~~~~~~~-~~~~ns~-Np~~i-~G~~T~a 311 (521)
++|++.|++|+||||++ ++..|+.+++.+||+|+.+++ +++++.+.+++++++.+ +++++++ ||.++ .||+|++
T Consensus 90 ~aa~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~~~g~~t~~ 168 (325)
T 3dwg_A 90 MAARLKGYRLICVMPEN-TSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTG 168 (325)
T ss_dssp HHHHHHTCEEEEEEESS-SCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHHHHHHHTHH
T ss_pred HHHHHcCCcEEEEECCC-CCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHHHHHHHHHH
Confidence 99999999999999997 799999999999999999997 58999999999988876 8888875 88887 5999999
Q ss_pred HHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhh
Q 009957 312 VEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFAS 391 (521)
Q Consensus 312 ~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~ 391 (521)
+||++|++ .||+||+|+|+||+++|++++|+++ .+.+|||+||+++++.+. + ..++.+
T Consensus 169 ~Ei~~q~~--~~d~vv~pvG~GG~~aGi~~~~k~~------~p~~~vigVe~~~~~~~~-----~---------~~~i~~ 226 (325)
T 3dwg_A 169 PELLADLP--EITHFVAGLGTTGTLMGTGRFLREH------VANVKIVAAEPRYGEGVY-----A---------LRNMDE 226 (325)
T ss_dssp HHHHHHCT--TCCEEEEECSSSHHHHHHHHHHHHH------STTCEEEEEEEECCGGGG-----C---------CSSGGG
T ss_pred HHHHHhcC--CCCEEEEecCchHHHHHHHHHHHHh------CCCCEEEEEeeCCCcchh-----c---------cCcccC
Confidence 99999998 3999999999999999999998864 267899999999976552 1 123333
Q ss_pred hhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCe--EEEEeC
Q 009957 392 AIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDR--TVVVST 468 (521)
Q Consensus 392 ~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~--vV~v~T 468 (521)
++ .|.++ .+...+.++.|+|+|+++++++| +++|+++||++|++++|++++.+++ ..++++ ||+++|
T Consensus 227 ~~---~~~~~------~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssa~a~aa~~~~~~~~-~~~g~~~~Vv~i~~ 296 (325)
T 3dwg_A 227 GF---VPELY------DPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGA-LAAGERADIALVVA 296 (325)
T ss_dssp CC---CCTTC------CGGGCSEEEEEEHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHHHH-HHHTCCEEEEEEEC
T ss_pred Cc---Ccccc------cHhhCCeEEEECHHHHHHHHHHHHHHcCceechhHHHHHHHHHHHHHHh-ccCCCCCeEEEEEC
Confidence 33 23322 23556789999999999999997 7899999999999999999987653 234566 999999
Q ss_pred CCCCCchHH-HH
Q 009957 469 AHGLKFTQS-KI 479 (521)
Q Consensus 469 G~g~K~~~~-~~ 479 (521)
|+|.||.++ ++
T Consensus 297 g~g~ky~~~~~~ 308 (325)
T 3dwg_A 297 DAGWKYLSTGAY 308 (325)
T ss_dssp BBGGGGGGGTTT
T ss_pred CCCccccCchhh
Confidence 999999988 54
No 30
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=4.7e-48 Score=409.54 Aligned_cols=293 Identities=19% Similarity=0.186 Sum_probs=245.9
Q ss_pred hhhcccccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHH
Q 009957 158 DIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSA 237 (521)
Q Consensus 158 ~~vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa 237 (521)
+.+++.+|+|||++++++.+. +| .+||+|+|++|||||||||++.+++..+.+.+....+..+|+++|+||||.|+|+
T Consensus 115 ~~i~~~ig~TPLv~l~~Ls~~-~g-~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~AlA~ 192 (430)
T 4aec_A 115 DNVSQLIGKTPMVYLNSIAKG-CV-ANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAF 192 (430)
T ss_dssp SSGGGGSSCCCEEECCGGGTT-CS-SEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHH
T ss_pred hhhhccCCCCCeEEChhhhhh-cC-CeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHHHHHH
Confidence 457889999999999999876 66 4899999999999999999999999876432211112357999999999999999
Q ss_pred HHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC--CHHHHHHHHHHHHhcC-CccccCCC-ChHh-HhhHHHHHH
Q 009957 238 YCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT--DFDGCMKLIREVTSEL-PIYLANSL-NSLR-LEGQKTAAV 312 (521)
Q Consensus 238 ~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~~~~~~~~~~~~-~~~~~ns~-Np~~-i~G~~T~a~ 312 (521)
+|+++|++|+||||++ ++..|+.+++.+||+|+.+++ +++++.+.+++++++. ++++++++ ||.+ +.||.|+++
T Consensus 193 aAa~~Gl~~~IvmP~~-~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T~a~ 271 (430)
T 4aec_A 193 IAASRGYRLILTMPAS-MSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGP 271 (430)
T ss_dssp HHHHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHTHHH
T ss_pred HHHHhCCEEEEEEcCC-CCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHHHHH
Confidence 9999999999999997 799999999999999999974 5889999999998876 67888875 7887 789999999
Q ss_pred HHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhh
Q 009957 313 EILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASA 392 (521)
Q Consensus 313 EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~ 392 (521)
||++|+++ .||+||+|+|+||+++|++++|+++ .+.++||+|||++++.+. .|.. ..+.++|
T Consensus 272 EI~eQl~~-~~D~vVvpvG~GGtlaGi~~~lk~~------~p~~kVigVep~~s~~l~----~g~~-------~~~~i~G 333 (430)
T 4aec_A 272 EIWDDTKG-KVDIFVAGIGTGGTITGVGRFIKEK------NPKTQVIGVEPTESDILS----GGKP-------GPHKIQG 333 (430)
T ss_dssp HHHHHTTS-CEEEEEEECSSSHHHHHHHHHHHHH------CTTSEEEEEEEGGGCGGG----TCCC-------CCCSCTT
T ss_pred HHHHHcCC-CCCEEEEeCCccHHHHHHHHHHHHh------CCCCEEEEEEeCCCcHhh----CCCc-------cceeehh
Confidence 99999974 6999999999999999999998864 267899999999987653 3421 2344567
Q ss_pred hccCC-CccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCC
Q 009957 393 IQIGD-PVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAH 470 (521)
Q Consensus 393 i~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~ 470 (521)
|+.+. |.++. .+..+.++.|+|+|+++++++| +++|+++||++|++++|++++.+++. .++++||+|+|++
T Consensus 334 l~~~~~p~~l~------~~~vd~~v~Vsd~ea~~a~r~La~~eGi~vepssGaa~aAal~la~~~~-~~g~~VV~Il~d~ 406 (430)
T 4aec_A 334 IGAGFIPKNLD------QKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPE-NAGKLIAVVFPSF 406 (430)
T ss_dssp SCCSSCCTTCC------TTTCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHTTSGG-GTTCEEEEEECBB
T ss_pred ccCCCCcHHHH------HHhCCeEEEECHHHHHHHHHHHHHHCCCEEehHHHHHHHHHHHHHHhcC-CCcCeEEEEECCC
Confidence 77654 44322 3456789999999999999997 78999999999999999999876653 3688999999999
Q ss_pred CCCchHHH
Q 009957 471 GLKFTQSK 478 (521)
Q Consensus 471 g~K~~~~~ 478 (521)
|.||.+++
T Consensus 407 G~rylst~ 414 (430)
T 4aec_A 407 GERYLSTP 414 (430)
T ss_dssp GGGGTTSH
T ss_pred Cccccchh
Confidence 99999875
No 31
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=2.1e-47 Score=395.71 Aligned_cols=288 Identities=16% Similarity=0.141 Sum_probs=228.3
Q ss_pred ccCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHhcC
Q 009957 164 EGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAG 243 (521)
Q Consensus 164 eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~G 243 (521)
.|+|||+++++|++. +|. +||+|+|++|||||||||++.+++..+.+......+.++|+++||||||.|+|++|+++|
T Consensus 33 IG~TPLv~~~~Ls~~-~G~-~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G 110 (344)
T 3vc3_A 33 IGRTPLVYLNKVTEG-CGA-YVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKG 110 (344)
T ss_dssp SCCCCEEECCSTTTT-CCS-EEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHT
T ss_pred cCCCceEECcccchh-hCC-EEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcC
Confidence 589999999999987 776 899999999999999999999999887543222223468999999999999999999999
Q ss_pred CCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCH--HHHHHHHHHH-HhcCCccccCCC-ChHh-HhhHHHHHHHHHHhc
Q 009957 244 IPSIVFLPANKISIAQLVQPIANGAFVLSIDTDF--DGCMKLIREV-TSELPIYLANSL-NSLR-LEGQKTAAVEILQQF 318 (521)
Q Consensus 244 i~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~--dd~~~~~~~~-~~~~~~~~~ns~-Np~~-i~G~~T~a~EI~eQl 318 (521)
++|+||||++ ++..|+.+++.|||+|+.+++.. +++...+.++ .++.+.++.+++ ||.+ ..||+|+++||++|+
T Consensus 111 ~~~~IvmP~~-~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g~EI~eq~ 189 (344)
T 3vc3_A 111 YKMVLTMPSY-TSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDT 189 (344)
T ss_dssp CEEEEEEETT-SCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHHHHHHHHT
T ss_pred CcEEEEECCC-ChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHHHHHHHHh
Confidence 9999999997 79999999999999999998643 3333333333 445567777775 8875 566999999999999
Q ss_pred CCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhhhhccCCC
Q 009957 319 DWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFASAIQIGDP 398 (521)
Q Consensus 319 ~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~~i~i~~P 398 (521)
++ .||+||+|+|+||+++|++++|++. +|..++|+|||++++.+.. +... .....++.+..+
T Consensus 190 ~~-~~d~vv~~vGgGG~~~Gi~~~~k~~------~p~v~vigVep~~s~~l~~----~~~~-------~~~i~g~g~~~~ 251 (344)
T 3vc3_A 190 NG-QVDIFVMGIGSGGTVSGVGQYLKSK------NPNVKIYGVEPSESNVLNG----GKPG-------PHHITGNGVGFK 251 (344)
T ss_dssp TT-CCCEEEEECSSSHHHHHHHHHHHHH------CTTCEEEEEEEGGGCGGGT----CCCC-------CCSCTTSCCSSC
T ss_pred CC-CceEEEEecCCccchHHHhhhhHhh------CCCceEEEEcCCCChhhcC----CCCC-------CeeEeccccccc
Confidence 75 7999999999999999999988763 3678999999999765542 2110 111223333322
Q ss_pred ccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCCCchHH
Q 009957 399 VSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTAHGLKFTQS 477 (521)
Q Consensus 399 ~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG~g~K~~~~ 477 (521)
... ...+..+.++.|+|+|+++++++| +++|++++|++|++++|++++.+.. ..++++||+|+|++|.||.++
T Consensus 252 ~~~-----~~~~~~d~~v~v~d~eai~a~~~L~~~eGi~v~~ssga~~~aAl~~a~~~-~~~g~~VV~il~d~G~rYlst 325 (344)
T 3vc3_A 252 PDI-----LDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRLAQLP-ENKGKLIVTVHPSFGERYLSS 325 (344)
T ss_dssp CTT-----CCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTSG-GGTTCEEEEEECBBGGGGTTS
T ss_pred Ccc-----cchhhceEEEEECHHHHHHHHHHHHHHCCCEEehhHHHHHHHHHHHhccc-cCCCCEEEEEECCCchhhccc
Confidence 211 013445678999999999999987 8899999999999999988876533 347899999999999999877
Q ss_pred H
Q 009957 478 K 478 (521)
Q Consensus 478 ~ 478 (521)
+
T Consensus 326 ~ 326 (344)
T 3vc3_A 326 V 326 (344)
T ss_dssp T
T ss_pred h
Confidence 5
No 32
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=3.9e-46 Score=391.95 Aligned_cols=301 Identities=16% Similarity=0.185 Sum_probs=235.7
Q ss_pred CCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHhcCCC
Q 009957 166 NSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIP 245 (521)
Q Consensus 166 ~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi~ 245 (521)
.|||+++++|++. +|..+||+|+|++|||||||||++.+++..++ +.|.+ ..|+++||||||.|+|++|++.|++
T Consensus 50 ~TPL~~~~~l~~~-~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~---~~g~~-~vv~~~ssGN~g~a~A~aa~~~G~~ 124 (388)
T 1v8z_A 50 PTPLYYAKRLTEK-IGGAKIYLKREDLVHGGAHKTNNAIGQALLAK---FMGKT-RLIAETGAGQHGVATAMAGALLGMK 124 (388)
T ss_dssp SCCEEECHHHHHH-HTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHH---HTTCC-EEEEEESSSHHHHHHHHHHHHTTCE
T ss_pred CCCceehHhhHhh-cCCceEEEEeccCCCCCCHHHHHHHHHHHHHH---HcCCC-EEEEecCchHHHHHHHHHHHHcCCc
Confidence 4999999998876 66458999999999999999999998887653 34533 3344589999999999999999999
Q ss_pred EEEEccCCcCC--HHhHHhHHhCCCEEEEECC---CHHHHHHHHHH-HHhcC-C-ccccCCC---ChH--hH-hhHHHHH
Q 009957 246 SIVFLPANKIS--IAQLVQPIANGAFVLSIDT---DFDGCMKLIRE-VTSEL-P-IYLANSL---NSL--RL-EGQKTAA 311 (521)
Q Consensus 246 ~~V~vP~~~~s--~~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~-~~~~~-~-~~~~ns~---Np~--~i-~G~~T~a 311 (521)
|+|+||++..+ ..|+.+++.+||+|+.+++ +++++.+.+++ ++++. + +|..+++ +|+ .+ .||+|++
T Consensus 125 ~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~~~~~~~t~~ 204 (388)
T 1v8z_A 125 VDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIG 204 (388)
T ss_dssp EEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHH
T ss_pred EEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhHHHHHhHHHH
Confidence 99999985233 2457889999999999986 89999887754 45554 3 4444443 333 23 4899999
Q ss_pred HHHHHhcC---CCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCch----hhHHHhhCCccee---
Q 009957 312 VEILQQFD---WEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANP----LYLYYKSGWKDFK--- 381 (521)
Q Consensus 312 ~EI~eQl~---~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~----l~~~~~~G~~~~~--- 381 (521)
+||++|+. +..||+||+|+|+||+++|++++|+. ++.+|||+||++++.. +.+++..|.....
T Consensus 205 ~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~~~~~~-------~~~~~vigve~~~~~~~~~~~~~~l~~g~~~~~~~~ 277 (388)
T 1v8z_A 205 REAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVN-------DKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGM 277 (388)
T ss_dssp HHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-------CTTSEEEEEEEEETBGGGTBSCCHHHHCEEEEETTE
T ss_pred HHHHHHHHHhcCCCCCEEEEecCccHhHHHHHHHHhh-------CCCceEEEEccCccccchhhhhHHHhcCCceecccc
Confidence 99999993 34699999999999999999987651 3678999999998532 3566777742110
Q ss_pred ----------ecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHH
Q 009957 382 ----------AVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIK 450 (521)
Q Consensus 382 ----------~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~ 450 (521)
.....+|++++|++..+... .....+...+.++.|+|+|+++++++| +++|++++|++|++++++.+
T Consensus 278 ~~~~~~~~~~~~~~~~tia~gl~~~~~g~~--~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~ 355 (388)
T 1v8z_A 278 LSYFLQDEEGQIKPTHSIAPGLDYPGVGPE--HAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMK 355 (388)
T ss_dssp EEEECBCTTSCBCCCCCSSTTSCCSBCCHH--HHHHHHTTSEEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHH
T ss_pred ccccccccccccCCCceeeeccccCCCChh--HHHHHhcCCcEEEEECHHHHHHHHHHHHHhcCCeecccHHHHHHHHHH
Confidence 02235799999987655543 344445566789999999999999997 78999999999999999999
Q ss_pred HHhcCCCCCCCeEEEEeCCCCCCchHHHHhhh
Q 009957 451 LRNSGVIGPLDRTVVVSTAHGLKFTQSKIDYH 482 (521)
Q Consensus 451 l~~~g~i~~~~~vV~v~TG~g~K~~~~~~~~~ 482 (521)
+.++ +.++++||+++||+|.||.+.+.++.
T Consensus 356 l~~~--~~~~~~vv~i~tg~g~k~~~~~~~~~ 385 (388)
T 1v8z_A 356 LAKE--MSRDEIIIVNLSGRGDKDLDIVLKVS 385 (388)
T ss_dssp HHHT--SCTTCEEEEEECBBSGGGHHHHHHHH
T ss_pred HHHh--cCCCCEEEEEECCCCccCHHHHHHHh
Confidence 8765 46788999999999999999875543
No 33
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=3.4e-45 Score=389.17 Aligned_cols=294 Identities=19% Similarity=0.183 Sum_probs=232.5
Q ss_pred cccccCCccccccccccccCCCC-cEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHH
Q 009957 161 SAFEGNSNLFWAERFGKQFLGMN-DLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYC 239 (521)
Q Consensus 161 sl~eG~TPL~~~~~l~~~~lg~~-~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 239 (521)
.-..|+|||+++++|.+. +|++ +||+|+|++|||||||||++.+++..+.+.+... +..+|+++||||||.|+|++|
T Consensus 103 ~~~ig~TPLv~l~~Ls~~-~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~-~g~tVV~aSsGN~G~AlA~aa 180 (435)
T 1jbq_A 103 LKKIGDTPMVRINKIGKK-FGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLK-PGDTIIEPTSGNTGIGLALAA 180 (435)
T ss_dssp GGGSSCCCEEECCSHHHH-TTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSC-TTCEEEEECSSHHHHHHHHHH
T ss_pred HhhCCCCCeEECcchhhH-hCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCC-CCCEEEEeCCCHHHHHHHHHH
Confidence 346789999999999876 7763 8999999999999999999999988765432211 125799999999999999999
Q ss_pred HhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC--CHHHH---HHHHHHHHhcC-CccccCCC-ChHh-HhhHHHHH
Q 009957 240 ASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT--DFDGC---MKLIREVTSEL-PIYLANSL-NSLR-LEGQKTAA 311 (521)
Q Consensus 240 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd~---~~~~~~~~~~~-~~~~~ns~-Np~~-i~G~~T~a 311 (521)
+++|++|+||||++ ++..|+.+++.+||+|+.+++ +|+++ .+.+++++++. +.|+++++ |+.. +.||+|++
T Consensus 181 a~~Gi~~~IvmP~~-~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~~t~a 259 (435)
T 1jbq_A 181 AVRGYRCIIVMPEK-MSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTA 259 (435)
T ss_dssp HHHTCEEEEEECSC-CCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHH
T ss_pred HHcCCeEEEEeCCC-CCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHHHHHH
Confidence 99999999999997 799999999999999999985 47764 46677777765 45667754 6643 67899999
Q ss_pred HHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchh-hHHHhhCCcceeecccccchh
Q 009957 312 VEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPL-YLYYKSGWKDFKAVKASTTFA 390 (521)
Q Consensus 312 ~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l-~~~~~~G~~~~~~~~~~~Tia 390 (521)
+||++|+++ .+|+||+|+|+||+++|++++|++. .|..|||+||++++..+ ...+..+. ...+.+
T Consensus 260 ~EI~eQl~~-~~D~vVvpvGtGGtlaGi~~~lk~~------~p~vrVigVep~gs~~~~~~~l~~~~-------~~~~~~ 325 (435)
T 1jbq_A 260 DEILQQCDG-KLDMLVASVGTGGTITGIARKLKEK------CPGCRIIGVDPEGSILAEPEELNQTE-------QTTYEV 325 (435)
T ss_dssp HHHHHHHTT-CCCEEEEECSSSHHHHHHHHHHHHH------CTTCEEEEEEETTCSCSSSGGGGCCS-------CCCCSC
T ss_pred HHHHHHcCC-CCCEEEEecCCcHhHHHHHHHHHHh------CCCCEEEEEecCCchhhchhhhhcCC-------Ccceee
Confidence 999999974 6899999999999999999998863 25679999999997543 23344331 123455
Q ss_pred hhhccCCC-ccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeC
Q 009957 391 SAIQIGDP-VSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVST 468 (521)
Q Consensus 391 ~~i~i~~P-~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~T 468 (521)
++++.... ..+. +...+.++.|+|+|+++++++| +++|+++||++|++++|++++.++ +.++++||+|+|
T Consensus 326 ~gig~~~~~~~l~------~~~vd~~~~Vsd~ea~~a~r~La~~eGilve~ssgaalaaa~~~~~~--~~~g~~VV~ilt 397 (435)
T 1jbq_A 326 EGIGYDFIPTVLD------RTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQE--LQEGQRCVVILP 397 (435)
T ss_dssp CSCCCSSCCTTCC------GGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHHHHHHHHHHHHHGGG--CCTTCEEEEEEC
T ss_pred cccccCccchhhh------hhhccceEEeCHHHHHHHHHHHHHHcCCEEcHHHHHHHHHHHHHHHH--cCCCCeEEEEEc
Confidence 66654432 1111 2345678999999999999987 789999999999999999998765 567889999999
Q ss_pred CCCCCchHHHH
Q 009957 469 AHGLKFTQSKI 479 (521)
Q Consensus 469 G~g~K~~~~~~ 479 (521)
|++.||.+.++
T Consensus 398 d~g~ky~~~~~ 408 (435)
T 1jbq_A 398 DSVRNYMTKFL 408 (435)
T ss_dssp BBGGGGTTTTT
T ss_pred CCcccccchhh
Confidence 99999988653
No 34
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=1.2e-45 Score=387.76 Aligned_cols=288 Identities=22% Similarity=0.186 Sum_probs=236.3
Q ss_pred chhhcccc--cCCccccccccccccCCCCcEEEecCCCCC-CCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHH
Q 009957 157 DDIVSAFE--GNSNLFWAERFGKQFLGMNDLWVKHCGISH-TGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSA 233 (521)
Q Consensus 157 ~~~vsl~e--G~TPL~~~~~l~~~~lg~~~l~vK~E~~nP-TGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~ 233 (521)
+++.++.+ ..|||+++++|++. | .+||+|+|++|| |||||||++.+++..+....+.| ++|+++|+||||.
T Consensus 85 ~~~~~~~g~~~~TPL~~l~~Ls~~--g-~~IylK~E~lnp~tGS~K~R~a~~~i~~l~~a~~~g---~~Iv~assGNhG~ 158 (389)
T 1wkv_A 85 PSPLDFFERGKPTPLVRSRLQLPN--G-VRVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKG---SLVADATSSNFGV 158 (389)
T ss_dssp SSHHHHHHHSCSCCEEECCCCCST--T-EEEEEEEGGGSTTTSBTTHHHHHHHHHHHTTTSCTT---CEEEEECCHHHHH
T ss_pred HHHHHHhCCCCCCCeEEccccccC--C-CeEEEEEcCCCCCcCChHHHHHHHHHHHHHHHHhcC---CEEEEECCcHHHH
Confidence 44566666 46999999988753 4 389999999999 99999999999888743122233 5799999999999
Q ss_pred HHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEE-EEC-CCHHHHHHHHHHHHhcCCccccCCC-ChHh-HhhHHH
Q 009957 234 ALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVL-SID-TDFDGCMKLIREVTSELPIYLANSL-NSLR-LEGQKT 309 (521)
Q Consensus 234 AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi-~v~-g~~dd~~~~~~~~~~~~~~~~~ns~-Np~~-i~G~~T 309 (521)
|+|++|++.|++|+||||++ ++..|+.+|+.+||+|+ .++ ++++++.+.+++++++.+++++|++ ||.+ +.||+|
T Consensus 159 AlA~aaa~~Gl~~~ivmp~~-~~~~k~~~~~~~GAeVv~~v~~~~~~da~~~a~~~~~~~g~~~~~p~~N~~~~~~~~~t 237 (389)
T 1wkv_A 159 ALSAVARLYGYRARVYLPGA-AEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRG 237 (389)
T ss_dssp HHHHHHHHTTCEEEEEEETT-SCHHHHHHHHHTTCEEEEETTCSSSGGGHHHHHHHHHHHCCEECCTTTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCeEEEEECCC-CCHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHccCcEecCcCCChHHHHHHHHH
Confidence 99999999999999999998 78899999999999999 888 8899999999998888888889987 7864 778999
Q ss_pred HHHHHHHhcC--CCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeeccccc
Q 009957 310 AAVEILQQFD--WEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKAST 387 (521)
Q Consensus 310 ~a~EI~eQl~--~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~ 387 (521)
++.||++|+. +..||+||+|+|+||+++|++++|+++ ++.+|||+||+.+++++. |. .
T Consensus 238 ~g~Ei~~Q~~~~g~~~D~vv~~vG~GG~~~Gi~~~~k~~------~p~vrvigVe~~~~~~l~-----Gi---------~ 297 (389)
T 1wkv_A 238 TAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSV------DPSIRAVLVQPAQGDSIP-----GI---------R 297 (389)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHH------CTTCEEEEEEECTTCCCT-----TC---------C
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCchHhHHHHHHHHHHh------CCCCeEEEEecCCCCccc-----cc---------c
Confidence 9999999985 347999999999999999999998853 257899999999876542 21 1
Q ss_pred chhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEE
Q 009957 388 TFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVV 466 (521)
Q Consensus 388 Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v 466 (521)
++.. .|. + +. ....++.++.|+|+|+++++++| +++|++++|+||+++||++++.+++.+.++ .+|++
T Consensus 298 ~i~~-----~~~-~---~~-~~~~dg~~~~Vsd~ea~~a~~~l~~~eGi~~~pssa~alaa~~~l~~~g~~~~~-~vVvi 366 (389)
T 1wkv_A 298 RVET-----GML-W---IN-MLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPG-DYVVV 366 (389)
T ss_dssp CGGG-----CCS-H---HH-HSCCCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTTCSCSE-EEEEE
T ss_pred ccCC-----cch-h---hh-hheeccEEEEECHHHHHHHHHHHHHHcCCeEChHHHHHHHHHHHHHHhcCCCCC-CEEEE
Confidence 1111 122 1 11 12334489999999999999997 789999999999999999999888766654 48889
Q ss_pred eCCCCCCchHHHHhhh
Q 009957 467 STAHGLKFTQSKIDYH 482 (521)
Q Consensus 467 ~TG~g~K~~~~~~~~~ 482 (521)
+||+|.||.+++.++.
T Consensus 367 ltg~G~k~~~~~~~~~ 382 (389)
T 1wkv_A 367 VPDTGFKYLSLVQNAL 382 (389)
T ss_dssp ECBBGGGCHHHHHHHH
T ss_pred EcCCCccCHHHHHHHH
Confidence 9999999999875543
No 35
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=3.1e-46 Score=385.66 Aligned_cols=296 Identities=16% Similarity=0.114 Sum_probs=236.4
Q ss_pred hcccccCCccccccccccccC-CCCcEEEecCCCC-C--CCChhHHHHHHHHHHHHHHHhcCCCceEEEE--eCCchHHH
Q 009957 160 VSAFEGNSNLFWAERFGKQFL-GMNDLWVKHCGIS-H--TGSFKDLGMTVLVSQVNRLRKMKRPVVGVGC--ASTGDTSA 233 (521)
Q Consensus 160 vsl~eG~TPL~~~~~l~~~~l-g~~~l~vK~E~~n-P--TGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~--aSSGN~g~ 233 (521)
+++.+++|||++++++.+. + |..+||+|+|++| | |||||||++.+++..+. +.|. .+|++ +||||||.
T Consensus 9 i~~~~~~TPL~~~~~l~~~-~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~---~~g~--~~vv~~GassGN~g~ 82 (338)
T 1tzj_A 9 YPLTFGPTPIQPLARLSKH-LGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEAL---AQGC--DTLVSIGGIQSNQTR 82 (338)
T ss_dssp CCCSSSSCCEEECHHHHHH-TTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHH---HTTC--CEEEEEEETTCHHHH
T ss_pred cccCCCCCccEEHHHHHHh-hCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHH---HcCC--CEEEEcCCchhHHHH
Confidence 5788999999999998876 6 5358999999997 8 99999999999988764 3443 46777 89999999
Q ss_pred HHHHHHHhcCCCEEEEccCCcCCHH--------hHHhHHhCCCEEEEECCCHHHH-----HHHHHHHHhcCC-cccc-C-
Q 009957 234 ALSAYCASAGIPSIVFLPANKISIA--------QLVQPIANGAFVLSIDTDFDGC-----MKLIREVTSELP-IYLA-N- 297 (521)
Q Consensus 234 AlAa~aa~~Gi~~~V~vP~~~~s~~--------k~~q~~~~GA~Vi~v~g~~dd~-----~~~~~~~~~~~~-~~~~-n- 297 (521)
|+|++|++.|++|+||||.+ .+.. |+.+++.+||+|+.++++++++ .+.+++++++.+ .|+. +
T Consensus 83 alA~~a~~~G~~~~iv~p~~-~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~ 161 (338)
T 1tzj_A 83 QVAAVAAHLGMKCVLVQENW-VNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAG 161 (338)
T ss_dssp HHHHHHHHHTCEEEEEEECC-SSCCCTTTTTSHHHHHHHHTTCEEEECCC-------CHHHHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHhCCceEEEecCC-CCccccccccCccHHHHHhCCCEEEEeCCcchhhHHHHHHHHHHHHHhcCCceEEeCCC
Confidence 99999999999999999997 4554 8899999999999999998875 778888887765 3433 3
Q ss_pred -CCChHhHhhHHHHHHHHHHhcC--CCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHh
Q 009957 298 -SLNSLRLEGQKTAAVEILQQFD--WEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYK 374 (521)
Q Consensus 298 -s~Np~~i~G~~T~a~EI~eQl~--~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~ 374 (521)
..||.+++||+|+++||++|++ +..||+||+|+|+||+++|++++|++ +|. +. |||+||+++++.+.+...
T Consensus 162 ~~~n~~~~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~---~g~--~~-~vigve~~~~~~~~~~~~ 235 (338)
T 1tzj_A 162 CSDHPLGGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAA---DGR--AD-RVIGVDASAKPAQTREQI 235 (338)
T ss_dssp GTSSTTTTTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHT---TTC--GG-GEEEEECSSCHHHHHHHH
T ss_pred cCCCcccHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHh---hCC--CC-eEEEEEccCchHHHHHHH
Confidence 4689999999999999999995 23699999999999999999998874 343 56 999999999877654321
Q ss_pred hCCcceeecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccc-hHHHHHHHHHHH
Q 009957 375 SGWKDFKAVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPH-TGVALTALIKLR 452 (521)
Q Consensus 375 ~G~~~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePs-sA~alAa~~~l~ 452 (521)
. ...+|++++++++.|.. ...+..++++.+.++.|+|+|+++++++| +++|+++||+ +|++++|++++.
T Consensus 236 ~--------~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~ysa~alaa~~~~~ 306 (338)
T 1tzj_A 236 T--------RIARQTAEKVGLERDIM-RADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGMIEMV 306 (338)
T ss_dssp H--------HHHHHHHHHHTCSSCCC-GGGCEEECTTSCSBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHH
T ss_pred H--------HHHHHHHHHcCCCCCCC-cccEEEecCcccceeecCCHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHH
Confidence 1 11256777777665321 12233445667778899999999999997 7899999996 999999999998
Q ss_pred hcCCCCCCCeEEEEeCCCCCCchHHH
Q 009957 453 NSGVIGPLDRTVVVSTAHGLKFTQSK 478 (521)
Q Consensus 453 ~~g~i~~~~~vV~v~TG~g~K~~~~~ 478 (521)
+++.+.++++||+++|| |..+...+
T Consensus 307 ~~~~~~~~~~Vv~i~tG-G~~~~~~~ 331 (338)
T 1tzj_A 307 RNGEFPEGSRVLYAHLG-GVPALNGY 331 (338)
T ss_dssp HTTCSCTTCEEEEEECC-CGGGGGGG
T ss_pred HcCCCCCCCeEEEEECC-Ccccccch
Confidence 88777789999999999 56655543
No 36
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=2.9e-45 Score=389.12 Aligned_cols=304 Identities=14% Similarity=0.175 Sum_probs=231.5
Q ss_pred cCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHhcCC
Q 009957 165 GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGI 244 (521)
Q Consensus 165 G~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi 244 (521)
..|||+++++|++. +|..+||+|+|++|||||||||++.+++..+++ .|++ ..|+++||||||.|+|++|++.|+
T Consensus 76 ~~TPL~~~~~Ls~~-~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~---~g~~-~vI~~~ssGNhg~avA~aaa~~Gi 150 (418)
T 1x1q_A 76 RPTPLYHAKRLSEY-WGGAQVFLKREDLLHTGAHKINNTLGQALLARR---MGKR-RVIAETGAGQHGVSVATVAALFGL 150 (418)
T ss_dssp CSCCEEECHHHHHH-HTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHH---HTCC-EEEEECSSSHHHHHHHHHHHHHTC
T ss_pred CCCCcEEhHHhHhh-cCCceEEEEEccCCcCccHHHHHHHHHHHHHHH---cCCC-EEEEecCchHHHHHHHHHHHHcCC
Confidence 35999999999876 654589999999999999999999988876543 3432 345669999999999999999999
Q ss_pred CEEEEccCCcC--CHHhHHhHHhCCCEEEEEC---CCHHHHHHHHHH-HHhcC-C-ccccCCC---ChH--hH-hhHHHH
Q 009957 245 PSIVFLPANKI--SIAQLVQPIANGAFVLSID---TDFDGCMKLIRE-VTSEL-P-IYLANSL---NSL--RL-EGQKTA 310 (521)
Q Consensus 245 ~~~V~vP~~~~--s~~k~~q~~~~GA~Vi~v~---g~~dd~~~~~~~-~~~~~-~-~~~~ns~---Np~--~i-~G~~T~ 310 (521)
+|+||||++.+ ...|+.+|+.+||+|+.++ ++++++.+.+.+ ++++. + +|..++. +|+ .+ +||+|+
T Consensus 151 ~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq~t~ 230 (418)
T 1x1q_A 151 ECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVI 230 (418)
T ss_dssp EEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHHTHH
T ss_pred CEEEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHHHHH
Confidence 99999998522 1256778999999999998 489999887654 45553 3 4444443 343 23 599999
Q ss_pred HHHHHHhcC---CCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCC----chhhHHHhhCCccee--
Q 009957 311 AVEILQQFD---WEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANA----NPLYLYYKSGWKDFK-- 381 (521)
Q Consensus 311 a~EI~eQl~---~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~----~~l~~~~~~G~~~~~-- 381 (521)
++||++|+. +..||+||+|+|+||+++|++.+|+++ + ++.+|||+||++++ +.+..++..|.....
T Consensus 231 ~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~~~k~l---~--~p~~~vigVe~~g~~~~~~~~~~~l~~G~~~~~~g 305 (418)
T 1x1q_A 231 GEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYL---P--EGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHG 305 (418)
T ss_dssp HHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHHHHHTS---C--TTCCEEEEEEECCTTSSSCHHHHHHHHTCEEEETT
T ss_pred HHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHHHHHHh---C--CCCCeEEEEecCCcccccHHHHHHHHcCCeeeecc
Confidence 999999984 346999999999999999999988742 2 36789999999997 356788888853210
Q ss_pred -----------ecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHH
Q 009957 382 -----------AVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALI 449 (521)
Q Consensus 382 -----------~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~ 449 (521)
.....+|+++||++..+.+. .....+...+.++.|+|+|+++++++| +++|++++|++|+++++++
T Consensus 306 ~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~--~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~egi~~~~~sa~a~a~a~ 383 (418)
T 1x1q_A 306 SYMYLLYDHDGQITPAHSVSAGLDYPGVGPE--HSYYADAGVAEYASVTDEEALEGFKLLARLEGIIPALESAHAIAYAA 383 (418)
T ss_dssp EEEEBCCC----------------CSBCCHH--HHHHHHHTSEEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHH
T ss_pred ccccccccccccccCCceeeeccCCCCCCHH--HHHHHhccCeEEEEECHHHHHHHHHHHHHhcCCcccchHHHHHHHHH
Confidence 01235799999987766654 234445556789999999999999997 8899999999999999999
Q ss_pred HHHhcCCCCCCCeEEEEeCCCCCCchHHHHhhh
Q 009957 450 KLRNSGVIGPLDRTVVVSTAHGLKFTQSKIDYH 482 (521)
Q Consensus 450 ~l~~~g~i~~~~~vV~v~TG~g~K~~~~~~~~~ 482 (521)
++.++ +.++++||+++||+|.||.+.+.++.
T Consensus 384 ~~~~~--~~~~~~Vv~vlsG~g~kd~~~~~~~~ 414 (418)
T 1x1q_A 384 KVVPE--MDKDQVVVINLSGRGDKDVTEVMRLL 414 (418)
T ss_dssp HHTTT--SCTTCEEEEEECBBGGGTHHHHHHTC
T ss_pred HHHHh--cCCCCeEEEEECCCCCCCHHHHHHHh
Confidence 87654 45789999999999999999886554
No 37
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=1.5e-45 Score=381.58 Aligned_cols=289 Identities=15% Similarity=0.118 Sum_probs=235.2
Q ss_pred hhhcccccCCccccccccccccCCCCcEEEecCCCCC--CCChhHHHHHHHHHHHHHHHhcCCCceEEEEeC--CchHHH
Q 009957 158 DIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISH--TGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCAS--TGDTSA 233 (521)
Q Consensus 158 ~~vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nP--TGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aS--SGN~g~ 233 (521)
..+++..|+|||+++++|.+. +|. +||+|+|++|| |||||||++.+++..+. +.| .++|+++| |||||.
T Consensus 24 ~ri~~~~~~TPL~~~~~l~~~-~g~-~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~---~~G--~~~vv~~s~tsGN~g~ 96 (342)
T 4d9b_A 24 PRLEFIGAPTPLEYLPRLSDY-LGR-EIYIKRDDVTPIAMGGNKLRKLEFLVADAL---REG--ADTLITAGAIQSNHVR 96 (342)
T ss_dssp CCCCSSCSCCCEEECHHHHHH-HTS-CEEEEEGGGCSSTTCCTHHHHHHHHHHHHH---HTT--CCEEEEEEETTCHHHH
T ss_pred CcccccCCCCceeEhhhhHHh-hCC-EEEEEeCCCCCCCCcchHHHhHHHHHHHHH---HcC--CCEEEEcCCcccHHHH
Confidence 446788999999999998876 675 89999999999 99999999999988753 344 35788885 799999
Q ss_pred HHHHHHHhcCCCEEEEccCCcCCH--------HhHHhHHhCCCEEEEECCC--HHHHH-HHHHHHHhcCCc-ccc--CCC
Q 009957 234 ALSAYCASAGIPSIVFLPANKISI--------AQLVQPIANGAFVLSIDTD--FDGCM-KLIREVTSELPI-YLA--NSL 299 (521)
Q Consensus 234 AlAa~aa~~Gi~~~V~vP~~~~s~--------~k~~q~~~~GA~Vi~v~g~--~dd~~-~~~~~~~~~~~~-~~~--ns~ 299 (521)
|+|++|++.|++|+||||.+ .+. .|+.+++.+||+|+.++++ ++++. +.++++.++.+. |+. +..
T Consensus 97 alA~aa~~~G~~~~iv~p~~-~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~ 175 (342)
T 4d9b_A 97 QTAAVAAKLGLHCVALLENP-IGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVGGS 175 (342)
T ss_dssp HHHHHHHHHTCEEEEEEECT-TCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTTCCEEECCGGGC
T ss_pred HHHHHHHHhCCcEEEEEeCC-CCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcCCceEEeCCCCC
Confidence 99999999999999999987 452 4888899999999999874 45555 456667666543 322 235
Q ss_pred ChHhHhhHHHHHHHHHHhcCC-CCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCc
Q 009957 300 NSLRLEGQKTAAVEILQQFDW-EVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWK 378 (521)
Q Consensus 300 Np~~i~G~~T~a~EI~eQl~~-~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~ 378 (521)
||+.++||+|+++||++|+++ ..||+||+|+|+||+++|++++|+++ .+.+|||+||+++++.+.+....
T Consensus 176 n~~~~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~------~~~~~vigVe~~~~~~~~~~~~~--- 246 (342)
T 4d9b_A 176 SALGAMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHL------MPDVELIGVTVSRSVAEQKPKVI--- 246 (342)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHH------CTTSEEEEEESSSCHHHHHHHHH---
T ss_pred ChHHHHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhh------CCCCeEEEEEecCcHHHHHHHHH---
Confidence 899999999999999999975 47999999999999999999998864 25789999999998877654321
Q ss_pred ceeecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccc-hHHHHHHHHHHHhcCC
Q 009957 379 DFKAVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPH-TGVALTALIKLRNSGV 456 (521)
Q Consensus 379 ~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePs-sA~alAa~~~l~~~g~ 456 (521)
...+|++++|++..... +.++++..+.++.|+|+|+++++++| +++|+++||+ +|++++|++++.+++.
T Consensus 247 -----~~~~t~a~gl~~~~~~~----~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epsYsa~a~aa~~~~~~~~~ 317 (342)
T 4d9b_A 247 -----ALQQAIAGQLALTATAD----IHLWDDYFAPGYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKR 317 (342)
T ss_dssp -----HHHHHHHHHTTCCCCCC----CEEECTTSTTCTTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHHTC
T ss_pred -----HHHHHHHHHcCCCCccc----eEEEecCCCceEecCCHHHHHHHHHHHHhcCccccccHHHHHHHHHHHHHHcCC
Confidence 12357888887641111 12245667778999999999999997 7899999998 9999999999998887
Q ss_pred CCCCCeEEEEeCCCCC
Q 009957 457 IGPLDRTVVVSTAHGL 472 (521)
Q Consensus 457 i~~~~~vV~v~TG~g~ 472 (521)
+.++++||+|+||++.
T Consensus 318 ~~~~~~Vv~i~tGGn~ 333 (342)
T 4d9b_A 318 FNDDGPILFIHTGGAP 333 (342)
T ss_dssp SSSSSCEEEEECCCTT
T ss_pred CCCCCeEEEEECCCcc
Confidence 8889999999999753
No 38
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=2.2e-45 Score=380.03 Aligned_cols=290 Identities=13% Similarity=0.089 Sum_probs=235.3
Q ss_pred hcccccCCccccccccccccC-CCCcEEEecCCCC-C--CCChhHHHHHHHHHHHHHHHhcCCCceEEEE--eCCchHHH
Q 009957 160 VSAFEGNSNLFWAERFGKQFL-GMNDLWVKHCGIS-H--TGSFKDLGMTVLVSQVNRLRKMKRPVVGVGC--ASTGDTSA 233 (521)
Q Consensus 160 vsl~eG~TPL~~~~~l~~~~l-g~~~l~vK~E~~n-P--TGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~--aSSGN~g~ 233 (521)
+++..++|||+++++|++. + |..+||+|+|++| | |||||||++.+++..+. +.| ..+|++ +|+||||.
T Consensus 9 i~~~~~~TPL~~~~~l~~~-~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~---~~g--~~~vv~~G~ssGN~g~ 82 (341)
T 1f2d_A 9 YPLTFGPSPISNLNRLSQH-LGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIV---EGD--YTHLVSIGGRQSNQTR 82 (341)
T ss_dssp CCCSSSSCCEEECHHHHHH-TTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHH---HSC--CSEEEEEEETTCHHHH
T ss_pred cccCCCCCcceeHHhHHHh-hCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHH---HcC--CCEEEEcCCcchHHHH
Confidence 5678899999999998876 6 5358999999999 9 99999999999998764 344 357888 99999999
Q ss_pred HHHHHHHhcCCCEEEEccCCcCC-----H------HhHHhHHhCCCEEEEECCCHH-----HHHHHHHHHHhcCC--ccc
Q 009957 234 ALSAYCASAGIPSIVFLPANKIS-----I------AQLVQPIANGAFVLSIDTDFD-----GCMKLIREVTSELP--IYL 295 (521)
Q Consensus 234 AlAa~aa~~Gi~~~V~vP~~~~s-----~------~k~~q~~~~GA~Vi~v~g~~d-----d~~~~~~~~~~~~~--~~~ 295 (521)
|+|++|+++|++|+||||.+ .+ . .|+.+++.+||+|+.++++++ ++.+.+++++++.+ ++.
T Consensus 83 alA~~a~~~G~~~~iv~p~~-~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~i 161 (341)
T 1f2d_A 83 MVAALAAKLGKKCVLIQEDW-VPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPI 161 (341)
T ss_dssp HHHHHHHHHTCEEEEEEECC-SCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCceEEEeccC-CCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCcEEEe
Confidence 99999999999999999997 45 3 388999999999999998654 67788888888764 334
Q ss_pred cCC--CChHhHhhHHHHHHHHHHhcC--CCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhH
Q 009957 296 ANS--LNSLRLEGQKTAAVEILQQFD--WEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYL 371 (521)
Q Consensus 296 ~ns--~Np~~i~G~~T~a~EI~eQl~--~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~ 371 (521)
.++ .||..++||+|++.||++|++ |..||+||+|+|+||+++|++++|+++ ++.+|||+||+.+++++.+
T Consensus 162 ~~~~~~np~~~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~------~~~~~vigVe~~~~~~~~~ 235 (341)
T 1f2d_A 162 PAGCSEHKYGGLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQY------GRQDDVIAIDASFTSEKTK 235 (341)
T ss_dssp CGGGTTSTTTTTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGG------TCGGGEEEEECSSCHHHHH
T ss_pred CCCcCCCCccHHHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhc------CCCceEEEEEecCchHHHH
Confidence 444 489999999999999999986 347999999999999999999998753 2578999999999877754
Q ss_pred HHhhCCcceeecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeecc-chHHHHHHHH
Q 009957 372 YYKSGWKDFKAVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICP-HTGVALTALI 449 (521)
Q Consensus 372 ~~~~G~~~~~~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~eP-ssA~alAa~~ 449 (521)
. + .. ....+++++++..... ..+.++++..+.++.|+|+|+++++++| +++|+++|| ++|++++|++
T Consensus 236 ~---~---~~--~~~~~~~~~ig~~~~~---~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~egi~~ep~~sa~alaa~~ 304 (341)
T 1f2d_A 236 E---Q---TL--RIANNTAKLIGVEHEF---KDFTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLTDPVYEGKSMQGLI 304 (341)
T ss_dssp H---H---HH--HHHHHHHHHHTCCCCC---SCCCEECTTSTTBTTBCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHH
T ss_pred H---H---HH--HHHHHHHHHcCCCCCc---CeEEEecCcccceEecCCHHHHHHHHHHHHHcCCccccchHHHHHHHHH
Confidence 2 1 00 1123555666533210 0112245567778899999999999997 789999999 4999999999
Q ss_pred HHHhcCCCCCCCeEEEEeCCCCCC
Q 009957 450 KLRNSGVIGPLDRTVVVSTAHGLK 473 (521)
Q Consensus 450 ~l~~~g~i~~~~~vV~v~TG~g~K 473 (521)
++.+++.+.++++||+++||++..
T Consensus 305 ~~~~~~~~~~~~~Vv~i~tGG~~~ 328 (341)
T 1f2d_A 305 ALIKEDYFKPGANVLYVHLGGAPA 328 (341)
T ss_dssp HHHHTTCSCTTCEEEEEECCCGGG
T ss_pred HHHHhCCCCCCCeEEEEECCchHH
Confidence 998888777899999999997654
No 39
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=100.00 E-value=3.9e-44 Score=380.65 Aligned_cols=302 Identities=18% Similarity=0.193 Sum_probs=212.1
Q ss_pred cCCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHhcCC
Q 009957 165 GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGI 244 (521)
Q Consensus 165 G~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi 244 (521)
..|||+++++|++. +|..+||+|+|++|||||||||++..++..++ +.|++ ..|+++|+||||.|+|++|++.|+
T Consensus 80 ~~TPL~~~~~Ls~~-~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~---~~g~~-~vI~~~ssGNhG~A~A~aaa~~G~ 154 (422)
T 2o2e_A 80 RPSPLYEATRLSQH-AGSARIFLKREDLNHTGSHKINNVLGQALLAR---RMGKT-RVIAETGAGQHGVATATACALLGL 154 (422)
T ss_dssp CSCCEEECGGGGGG-TTTCEEEEECGGGCCSSTTHHHHHHHHHHHHH---HTTCC-EEEEEESSSHHHHHHHHHHHHHTC
T ss_pred CCCCeEEChhhHhh-cCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHH---HcCCC-eEEEecCccHHHHHHHHHHHHcCC
Confidence 34999999999887 76568999999999999999999988877653 34533 456679999999999999999999
Q ss_pred CEEEEccCCcCC--HHhHHhHHhCCCEEEEECC---CHHHHHHHHHH-HHhcC-C-ccccCCC---ChH--h-HhhHHHH
Q 009957 245 PSIVFLPANKIS--IAQLVQPIANGAFVLSIDT---DFDGCMKLIRE-VTSEL-P-IYLANSL---NSL--R-LEGQKTA 310 (521)
Q Consensus 245 ~~~V~vP~~~~s--~~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~-~~~~~-~-~~~~ns~---Np~--~-i~G~~T~ 310 (521)
+|+||||++.+. ..|+.+|+.+||+|+.++. +++++.+.+.+ ++++. + +|..++. +|+ . ..||+|+
T Consensus 155 ~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~q~t~ 234 (422)
T 2o2e_A 155 DCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDFQRII 234 (422)
T ss_dssp EEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHHTTHH
T ss_pred cEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHHHHHH
Confidence 999999986322 3566789999999999974 89999887754 45553 3 4544443 232 2 3589999
Q ss_pred HHHHHHhcC---CCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCC----chhhHHHhhCCccee--
Q 009957 311 AVEILQQFD---WEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANA----NPLYLYYKSGWKDFK-- 381 (521)
Q Consensus 311 a~EI~eQl~---~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~----~~l~~~~~~G~~~~~-- 381 (521)
++||++|+. +..||+||+|+|+||+++|++.+|+. ++.+|||+||++++ +.+.+++..|.....
T Consensus 235 g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~~~~~-------~p~v~vigVe~~g~~~~~~~~~~~l~~g~~~~~~g 307 (422)
T 2o2e_A 235 GMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFHAFLD-------DPGVRLVGFEAAGDGVETGRHAATFTAGSPGAFHG 307 (422)
T ss_dssp HHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSGGGTT-------CTTCEEEEEEECC----------------------
T ss_pred HHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHHHHhc-------CCCCeEEEEecCCCcccchhHHHHHHcCCceeccc
Confidence 999999972 34699999999999999999877641 36789999999996 345677776642110
Q ss_pred -----------ecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHH
Q 009957 382 -----------AVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALI 449 (521)
Q Consensus 382 -----------~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~ 449 (521)
.....+|+++||+++.+.. +...+.+...+.++.|+|+|+++++++| +++||++++++|+++++++
T Consensus 308 ~~~~~~~~~~g~~~~~~tia~gl~~~~~g~--~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~~~esa~A~a~a~ 385 (422)
T 2o2e_A 308 SFSYLLQDEDGQTIESHSISAGLDYPGVGP--EHAWLKEAGRVDYRPITDSEAMDAFGLLCRMEGIIPAIESAHAVAGAL 385 (422)
T ss_dssp -----------------------------------------CCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred cchhhcccccccccCCceeecccCCCCCCH--HHHHHHHhCCeeEEEECHHHHHHHHHHHHHHcCCccCchHHHHHHHHH
Confidence 0223578999998755443 2233344455789999999999999997 7899999999999999999
Q ss_pred HHHhcCCCCCCCeEEEEeCCCCCCchHHHHhhh
Q 009957 450 KLRNSGVIGPLDRTVVVSTAHGLKFTQSKIDYH 482 (521)
Q Consensus 450 ~l~~~g~i~~~~~vV~v~TG~g~K~~~~~~~~~ 482 (521)
++.++ +.++++||+++||+|.||.+.+.++.
T Consensus 386 ~l~~~--~~~~~~vvvilsG~g~kd~~~~~~~~ 416 (422)
T 2o2e_A 386 KLGVE--LGRGAVIVVNLSGRGDKDVETAAKWF 416 (422)
T ss_dssp HHHHH--HCTTCEEEEECCSCSSSHHHHHHHHC
T ss_pred HHHHh--cCCCCEEEEEeCCCCCCCHHHHHHHH
Confidence 88765 45788999999999999999885543
No 40
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=1e-43 Score=387.72 Aligned_cols=295 Identities=17% Similarity=0.172 Sum_probs=237.0
Q ss_pred cccccCCccccccccccccCCC-CcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHH
Q 009957 161 SAFEGNSNLFWAERFGKQFLGM-NDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYC 239 (521)
Q Consensus 161 sl~eG~TPL~~~~~l~~~~lg~-~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~a 239 (521)
.-..|+|||++++++.+. +|+ .+||+|+|++|||||||||++.+++..+.+.+... +..+|+++||||||.|+|++|
T Consensus 55 ~~~ig~TPl~~l~~l~~~-~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~-~g~~vv~~ssGN~g~a~A~~a 132 (527)
T 3pc3_A 55 LEVIGCTPLVKLNNIPAS-DGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLK-PGYTIIEPTSGNTGIGLAMAC 132 (527)
T ss_dssp GGGSSCCCEEECCSHHHH-TTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCC-TTCEEEEECSSHHHHHHHHHH
T ss_pred HhhcCCCCcEEcchhhhh-cCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCC-CCCEEEEeCCCHHHHHHHHHH
Confidence 346789999999999876 775 38999999999999999999999998765432221 125799999999999999999
Q ss_pred HhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC--CHHH---HHHHHHHHHhcCC-ccccCCC-ChH-hHhhHHHHH
Q 009957 240 ASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT--DFDG---CMKLIREVTSELP-IYLANSL-NSL-RLEGQKTAA 311 (521)
Q Consensus 240 a~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g--~~dd---~~~~~~~~~~~~~-~~~~ns~-Np~-~i~G~~T~a 311 (521)
+++|++|+||||++ ++..|+.+++.+||+|+.+++ +|++ +.+.+++++++.+ .++.+++ ||. .+.||.|++
T Consensus 133 ~~~G~~~~iv~p~~-~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~g~~t~~ 211 (527)
T 3pc3_A 133 AVKGYKCIIVMPEK-MSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTA 211 (527)
T ss_dssp HHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHHHHHTHH
T ss_pred HHhCCeEEEEEcCC-CCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHHHHHHHH
Confidence 99999999999997 799999999999999999986 5664 5667788887764 5566665 665 478999999
Q ss_pred HHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccccchhh
Q 009957 312 VEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKASTTFAS 391 (521)
Q Consensus 312 ~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~Tia~ 391 (521)
+||++|+++ .||+||+|+|+||+++|++++|++. .|..+||+|||+++.. ......+. .....+.++
T Consensus 212 ~Ei~~q~~~-~~d~vv~~vG~GG~~~G~~~~~k~~------~p~~~vigve~~~~~~-~~~~~~~~-----~~~~~~~~~ 278 (527)
T 3pc3_A 212 AEILWQLDN-KVDMIVVSAGTAGTISGIGRKIKEQ------VPSCQIVGVDPYGSIL-ARPAELNK-----TDVQFYEVE 278 (527)
T ss_dssp HHHHHHTTT-CCSEEEEECSSSHHHHHHHHHHHHH------CTTSEEEEEEETTCCC-SSSGGGGC-----CSCCCCSCC
T ss_pred HHHHHhcCC-CCCEEEEecCccHHHHHHHHHHHHh------CCCCEEEEEecCCccc-ccchhhcC-----CCCCceecc
Confidence 999999974 6999999999999999999998863 2567999999999753 22221111 112234556
Q ss_pred hhccCC-CccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCC
Q 009957 392 AIQIGD-PVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTA 469 (521)
Q Consensus 392 ~i~i~~-P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG 469 (521)
+++.+. |.++ .+...+.++.|+|+|+++++++| +++|+++||+||+++||++++.+. +.++++||+++|+
T Consensus 279 gi~~~~~p~~~------~~~~~d~~~~V~d~e~~~a~r~l~~~eGi~~~pssa~alaaal~~~~~--~~~~~~vv~i~~d 350 (527)
T 3pc3_A 279 GIGYDFPPTVF------DDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSSGGAMHAALEHARK--LKKGQRCVVILPD 350 (527)
T ss_dssp SCCCSSCCTTC------CGGGCCEEEEECGGGTHHHHHHHHHHHCCCBCHHHHHHHHHHHHHHTT--CCTTCEEEEEECB
T ss_pred ccCCCCCCccc------chhhCcEEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHHHHHHHH--cCCCCeEEEEEcC
Confidence 666543 3322 23456789999999999999997 789999999999999999998764 5678999999999
Q ss_pred CCCCchHHHH
Q 009957 470 HGLKFTQSKI 479 (521)
Q Consensus 470 ~g~K~~~~~~ 479 (521)
+|.||.++++
T Consensus 351 ~g~ryls~~~ 360 (527)
T 3pc3_A 351 GIRNYMTKFV 360 (527)
T ss_dssp BGGGGTTTTT
T ss_pred cchhhHhhhh
Confidence 9999876543
No 41
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=100.00 E-value=5.2e-44 Score=377.01 Aligned_cols=299 Identities=15% Similarity=0.136 Sum_probs=235.3
Q ss_pred CCccccccccccccCCCCcEEEecCCCCCCCChhHHHHHHHHHHHHHHHhcCCCceEEEE-eCCchHHHHHHHHHHhcCC
Q 009957 166 NSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGC-ASTGDTSAALSAYCASAGI 244 (521)
Q Consensus 166 ~TPL~~~~~l~~~~lg~~~l~vK~E~~nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~-aSSGN~g~AlAa~aa~~Gi 244 (521)
.|||+++++|++. +| .+||+|+|++|||||||||++..++..++ +.|. ..|++ +||||||.|+|++|+++|+
T Consensus 55 ~TPL~~~~~l~~~-~g-~~i~lK~E~l~ptGSfK~R~a~~~~~~a~---~~g~--~~vi~e~ssGNhg~a~A~aa~~~G~ 127 (396)
T 1qop_B 55 PTALTKCQNITAG-TR-TTLYLKREDLLHGGAHKTNQVLGQALLAK---RMGK--SEIIAETGAGQHGVASALASALLGL 127 (396)
T ss_dssp SCCEEECHHHHTT-SS-EEEEEEEGGGSTTSBTHHHHHHHHHHHHH---HTTC--CEEEEEESSSHHHHHHHHHHHHHTC
T ss_pred CCCcEEhhhhhhc-cC-CeEEEEeccCCCCCcHHHHHHHHHHHHHH---HcCc--CEEEEecCchHHHHHHHHHHHHCCC
Confidence 5999999999876 66 48999999999999999999988877653 3453 34555 8999999999999999999
Q ss_pred CEEEEccCCcCCH--HhHHhHHhCCCEEEEECC---CHHHHHHHHHHH-HhcC-C-ccccCCC---ChH--hH-hhHHHH
Q 009957 245 PSIVFLPANKISI--AQLVQPIANGAFVLSIDT---DFDGCMKLIREV-TSEL-P-IYLANSL---NSL--RL-EGQKTA 310 (521)
Q Consensus 245 ~~~V~vP~~~~s~--~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~~-~~~~-~-~~~~ns~---Np~--~i-~G~~T~ 310 (521)
+|+||||++.++. .++.+|+.+||+|+.++. +++++.+.+++. +++. + +|..++. +|+ .+ .||+|+
T Consensus 128 ~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~~g~~t~ 207 (396)
T 1qop_B 128 KCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMI 207 (396)
T ss_dssp EEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHH
T ss_pred cEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHHHHHhHH
Confidence 9999999852333 345789999999999985 899998877764 5543 3 3444432 333 23 489999
Q ss_pred HHHHHHhcC---CCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCc----hhhHHHhhCCccee--
Q 009957 311 AVEILQQFD---WEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANAN----PLYLYYKSGWKDFK-- 381 (521)
Q Consensus 311 a~EI~eQl~---~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~----~l~~~~~~G~~~~~-- 381 (521)
++||++|+. +..||+||+|+|+||+++|++.+|+. ++.+|||+||++++. .+.+++..|.....
T Consensus 208 ~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~~~~~~-------~~~~~vigVe~~~~~~~~~~~~~~l~~g~~~~~~g 280 (396)
T 1qop_B 208 GEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFIN-------DTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFG 280 (396)
T ss_dssp HHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-------CTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETE
T ss_pred HHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHHhc-------CCCCEEEEEeCCCccccchhhHHHHHcCCeeeecc
Confidence 999999992 24799999999999999999987752 367899999999854 35677887742110
Q ss_pred -----------ecccccchhhhhccCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccchHHHHHHHH
Q 009957 382 -----------AVKASTTFASAIQIGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPHTGVALTALI 449 (521)
Q Consensus 382 -----------~~~~~~Tia~~i~i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePssA~alAa~~ 449 (521)
.....+|++++|++..+... .....+...+.++.|+|+|+++++++| +++|++++|++|++++++.
T Consensus 281 ~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~--~~~l~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~ 358 (396)
T 1qop_B 281 MKAPMMQTADGQIEESYSISAGLDFPSVGPQ--HAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHAL 358 (396)
T ss_dssp EEEEECBCTTSCBCCCCCSSGGGCCSSCCHH--HHHHHHTTSSEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHH
T ss_pred chhhhcccccCCcCCCceeeccCCCCCCCHH--HHHHHhcCCeEEEEECHHHHHHHHHHHHHhcCCccccchHHHHHHHH
Confidence 01245799999987555432 344445566889999999999999997 7899999999999999999
Q ss_pred HHHhcCCCC-CCCeEEEEeCCCCCCchHHHHhhh
Q 009957 450 KLRNSGVIG-PLDRTVVVSTAHGLKFTQSKIDYH 482 (521)
Q Consensus 450 ~l~~~g~i~-~~~~vV~v~TG~g~K~~~~~~~~~ 482 (521)
++.++ +. ++++||+++||+|.||.+.+.++.
T Consensus 359 ~l~~~--~~~~~~~vv~i~tg~g~k~~~~~~~~~ 390 (396)
T 1qop_B 359 KMMRE--QPEKEQLLVVNLSGRGDKDIFTVHDIL 390 (396)
T ss_dssp HHHHH--STTSCEEEEEEECBBCGGGHHHHHHHC
T ss_pred HHHHh--cCCCCCeEEEEECCCCCCCHHHHHHHh
Confidence 88765 44 688999999999999999885544
No 42
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=1.4e-43 Score=364.36 Aligned_cols=282 Identities=15% Similarity=0.146 Sum_probs=229.3
Q ss_pred hcccccCCccccccccccccCCCCcEEEecCCCCC--CCChhHHHHHHHHHHHHHHHhcCCCceEEEEe--CCchHHHHH
Q 009957 160 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISH--TGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCA--STGDTSAAL 235 (521)
Q Consensus 160 vsl~eG~TPL~~~~~l~~~~lg~~~l~vK~E~~nP--TGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~a--SSGN~g~Al 235 (521)
+++..|+|||++++++.+. .|. +||+|+|++|| +||||||.+.+++..+. +.| ..+|+++ |+||||.|+
T Consensus 15 i~~~~~~TPL~~~~~l~~~-~g~-~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~---~~G--~~~vv~~G~ssGN~g~al 87 (325)
T 1j0a_A 15 VELIPWETPIQYLPNISRE-IGA-DVYIKRDDLTGLGIGGNKIRKLEYLLGDAL---SKG--ADVVITVGAVHSNHAFVT 87 (325)
T ss_dssp CCCCCSCCCEEECHHHHHH-HTS-EEEEEEGGGSCSTTCSTHHHHHHHHHHHHH---HTT--CSEEEEECCTTCHHHHHH
T ss_pred cccccCCCCceEhhhhhhh-hCC-EEEEEecccCCCCCCchHHHHHHHHHHHHH---HcC--CCEEEEcCCcchHHHHHH
Confidence 5678899999999988765 564 89999999999 99999999999887653 345 3578886 999999999
Q ss_pred HHHHHhcCCCEEEEccCCcC-CHHhHHhHHhCCCEEEEECCCHH-----HHHHHHHHHHhcCCc-cc-cC-CCChHhHhh
Q 009957 236 SAYCASAGIPSIVFLPANKI-SIAQLVQPIANGAFVLSIDTDFD-----GCMKLIREVTSELPI-YL-AN-SLNSLRLEG 306 (521)
Q Consensus 236 Aa~aa~~Gi~~~V~vP~~~~-s~~k~~q~~~~GA~Vi~v~g~~d-----d~~~~~~~~~~~~~~-~~-~n-s~Np~~i~G 306 (521)
|++|+++|++|+||||.+ . +..|+.+++.+||+|+.++++++ ++.+.+++++++.+. |+ .+ ..||...+|
T Consensus 88 A~~a~~~G~~~~iv~p~~-~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~~~g 166 (325)
T 1j0a_A 88 GLAAKKLGLDAILVLRGK-EELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLG 166 (325)
T ss_dssp HHHHHHTTCEEEEEEESC-CCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHHHTH
T ss_pred HHHHHHhCCcEEEEECCC-CCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHHHHHH
Confidence 999999999999999997 6 78899999999999999998875 677888888887754 33 33 358999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeecccc
Q 009957 307 QKTAAVEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKAS 386 (521)
Q Consensus 307 ~~T~a~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~ 386 (521)
++|++.||++|+++ .||+||+|+|+||+++|++++|+++ ++.+|||+||+++++++.+.. .
T Consensus 167 ~~t~~~Ei~~q~~~-~~d~vv~~vGtGGt~~Gi~~~lk~~------~~~~~vigVe~~~~~~~~~~~------------~ 227 (325)
T 1j0a_A 167 YVRAVGEIATQSEV-KFDSIVVAAGSGGTLAGLSLGLSIL------NEDIRPVGIAVGRFGEVMTSK------------L 227 (325)
T ss_dssp HHHHHHHHHHHCCC-CCSEEEEEESSSHHHHHHHHHHHHT------TCCCEEEEEECSSCSSSHHHH------------H
T ss_pred HHHHHHHHHHhhCC-CCCEEEEeCCchHhHHHHHHHHHhc------CCCceEEEEEecCchHHHHHH------------H
Confidence 99999999999963 6999999999999999999998853 257899999999988776532 1
Q ss_pred cchhhhhc--cCCCccHHHHHHHHHhcCCeEEEeCHHHHHHHHHHH-HhcCCeeccc-hHHHHHHHHHHHhcCCCCCCCe
Q 009957 387 TTFASAIQ--IGDPVSIDRAVYALKNCNGIVEEATEEELMDAMAQA-DSTGMFICPH-TGVALTALIKLRNSGVIGPLDR 462 (521)
Q Consensus 387 ~Tia~~i~--i~~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~~A~~~l-~~eGi~~ePs-sA~alAa~~~l~~~g~i~~~~~ 462 (521)
.|+++++. ++.|..... .+.++..+. +.|+|+|+++++++| +++|+++||+ +|++++|++++.+++.+ +++
T Consensus 228 ~t~~~~~~~~~g~~~~~~~--~~~~~~~~~-~~v~d~e~~~a~~~l~~~~gi~~ep~ssa~a~aa~~~~~~~~~~--~~~ 302 (325)
T 1j0a_A 228 DNLIKEAAELLGVKVEVRP--ELYDYSFGE-YGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLARKGEL--GEK 302 (325)
T ss_dssp HHHHHHHHHHTTCCCCSCC--EEEECSTTS-TTCCCHHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCS--CSE
T ss_pred HHHHHHHHHhcCCCCCCCc--EEecCcccC-CCCCCHHHHHHHHHHHHhhCcccccchHHHHHHHHHHHHHcCCC--CCc
Confidence 23444432 111211110 123456677 899999999999997 7899999995 99999999998887654 789
Q ss_pred EEEEeCCCCCC
Q 009957 463 TVVVSTAHGLK 473 (521)
Q Consensus 463 vV~v~TG~g~K 473 (521)
||+++||++..
T Consensus 303 Vv~i~tGG~~~ 313 (325)
T 1j0a_A 303 ILFIHTGGISG 313 (325)
T ss_dssp EEEEECCCHHH
T ss_pred EEEEECCCchh
Confidence 99999997543
No 43
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=89.46 E-value=2.4 Score=39.41 Aligned_cols=114 Identities=18% Similarity=0.164 Sum_probs=72.6
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHhcCCCEEEEc-------c-CCcCCHHhHHhHH
Q 009957 193 SHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFL-------P-ANKISIAQLVQPI 264 (521)
Q Consensus 193 nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v-------P-~~~~s~~k~~q~~ 264 (521)
+|.--.=+.....++..+++ .|-+ ..|+..|||.++..++-.. .|++++++- | ....++..++.++
T Consensus 22 ~~G~eNT~~tl~la~era~e---~~Ik-~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 22 KPGRENTEETLRLAVERAKE---LGIK-HLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp SCSGGGHHHHHHHHHHHHHH---HTCC-EEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHH---cCCC-EEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 45445556677766666644 3433 4566677888886655422 789988886 4 2246777888899
Q ss_pred hCCCEEEEECCCHHHHHHHHHHHHhcCCccc-cCC-CChHh-HhhHHH-HHHHHH
Q 009957 265 ANGAFVLSIDTDFDGCMKLIREVTSELPIYL-ANS-LNSLR-LEGQKT-AAVEIL 315 (521)
Q Consensus 265 ~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~-~ns-~Np~~-i~G~~T-~a~EI~ 315 (521)
..|++|+.-.--+....+.+ .++.|.++ ..- .+-+| +.||.+ .+.||.
T Consensus 96 ~~G~~V~t~tH~lsgveR~i---s~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~ 147 (201)
T 1vp8_A 96 KRGAKIVRQSHILSGLERSI---SRKLGGVSRTEAIAEALRSLFGHGLKVCVEIT 147 (201)
T ss_dssp HTTCEEEECCCTTTTTHHHH---HHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hCCCEEEEEeccccchhHHH---HHhcCCCCHHHHHHHHHHHHhcCCceEEEEEe
Confidence 99999987776565544443 33444322 221 26778 888885 677765
No 44
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=77.25 E-value=6 Score=36.84 Aligned_cols=113 Identities=14% Similarity=0.106 Sum_probs=68.5
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhcCCCceEEEEeCCchHHHHHHHHHHhcCCCEEEEc-------c-CCcCCHHhHHhHH
Q 009957 193 SHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFL-------P-ANKISIAQLVQPI 264 (521)
Q Consensus 193 nPTGSfKDRga~~~v~~a~~~~~~g~~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v-------P-~~~~s~~k~~q~~ 264 (521)
+|.--.=+.....++..+++ .|-+ ..|+..|||.++..++-.. .| +++++- | ....++..++.++
T Consensus 30 ~~G~eNT~~tl~la~era~e---~~Ik-~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 102 (206)
T 1t57_A 30 EPGKENTERVLELVGERADQ---LGIR-NFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALL 102 (206)
T ss_dssp SCSGGGHHHHHHHHHHHHHH---HTCC-EEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHH---cCCC-EEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 45545557777777666654 3433 4566677788886555322 45 666665 3 2246777788899
Q ss_pred hCCCEEEEECCCHHHHHHHHHHHHhcCCc-cccCCC-ChHhHhhHHH-HHHHHH
Q 009957 265 ANGAFVLSIDTDFDGCMKLIREVTSELPI-YLANSL-NSLRLEGQKT-AAVEIL 315 (521)
Q Consensus 265 ~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~-~~~ns~-Np~~i~G~~T-~a~EI~ 315 (521)
..|++|+.-.--+....+.+.+ +.+. |...-+ +-+|+.||.+ .+.||.
T Consensus 103 ~~G~~V~t~tH~lsG~eR~is~---kfGG~~p~eiiA~tLR~fgqG~KV~vEi~ 153 (206)
T 1t57_A 103 ERGVNVYAGSHALSGVGRGISN---RFGGVTPVEIMAETLRMVSQGFKVCVEIA 153 (206)
T ss_dssp HHTCEEECCSCTTTTHHHHHHH---HHCSCCHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred hCCCEEEEeeccccchhHHHHH---hcCCCCHHHHHHHHHHHhCCCceEEEEEe
Confidence 9999998766555544444332 3332 222212 6678888875 677765
No 45
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=76.70 E-value=4.1 Score=30.19 Aligned_cols=35 Identities=11% Similarity=0.316 Sum_probs=29.6
Q ss_pred HHHHHHHHhcCCeEE--------EeCHHHHHHHHHHHHhcCCe
Q 009957 402 DRAVYALKNCNGIVE--------EATEEELMDAMAQADSTGMF 436 (521)
Q Consensus 402 ~~~l~~l~~~~g~~v--------~Vsd~Ei~~A~~~l~~eGi~ 436 (521)
..++..++.++|.+. .|+.+|++.+.+.|++.|++
T Consensus 13 ~~lL~yIr~sGGildI~~~a~kygV~kdeV~~~LrrLe~KGLI 55 (59)
T 2xvc_A 13 RELLDYIVNNGGFLDIEHFSKVYGVEKQEVVKLLEALKNKGLI 55 (59)
T ss_dssp HHHHHHHHHTTSEEEHHHHHHHHCCCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCEEeHHHHHHHhCCCHHHHHHHHHHHHHCCCe
Confidence 356788898888653 79999999999999999986
No 46
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=66.43 E-value=53 Score=32.49 Aligned_cols=109 Identities=7% Similarity=0.143 Sum_probs=67.0
Q ss_pred eCCchHHHHHHHHHHhcCCCEEEEccCCcCCH---------------HhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhc
Q 009957 226 ASTGDTSAALSAYCASAGIPSIVFLPANKISI---------------AQLVQPIANGAFVLSIDTDFDGCMKLIREVTSE 290 (521)
Q Consensus 226 aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~---------------~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~ 290 (521)
--+|-.|..++..|+++|++++++-+...... .........+.+++.....+......+.++.++
T Consensus 7 lGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~ 86 (363)
T 4ffl_A 7 VGGKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYADEFYCFDVIKEPEKLLELSKRVDAVLPVNENLACIEFLNSIKEK 86 (363)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTSSEEEECCTTTCHHHHHHHHTSSSEEEECCCCHHHHHHHHHHGGG
T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhCCEEEECCCCcCHHHHHHHhcCCCEEEECCCChhHHHHHHHHHHH
Confidence 34577788899999999999988854321110 111112245666665554444445566667777
Q ss_pred CCccccCCCChHhHhhHHHHHHHHHHhcCCCCC-------cEEEEcCCchh
Q 009957 291 LPIYLANSLNSLRLEGQKTAAVEILQQFDWEVP-------DWVIVPGGNLG 334 (521)
Q Consensus 291 ~~~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~p-------D~VvVP~G~Gg 334 (521)
.+....++.....+.+-|....+++++.+-..| -+|+=|..++|
T Consensus 87 ~~~~~g~~~~a~~~~~dK~~~k~~l~~~gip~~~~~~ig~P~vvKp~~g~g 137 (363)
T 4ffl_A 87 FSCPVLFDFEAYRISRDKKKSKDYFKSIGVPTPQDRPSKPPYFVKPPCESS 137 (363)
T ss_dssp CSSCBCCCHHHHHHHTSHHHHHHHHHHTTCCCCCBSCSSSCEEEECSSCCT
T ss_pred CCCccCCCHHHHHHhhCHHHHHHHHHhcCCCCCCceecCCCEEEEECCCCC
Confidence 665544444556788899999999999762211 25666765444
No 47
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=65.87 E-value=3.2 Score=35.35 Aligned_cols=37 Identities=5% Similarity=-0.019 Sum_probs=25.6
Q ss_pred CCCccceeecC-CCCCCCCCCccCCCCcee-ecC-CCCcc
Q 009957 71 TNNTFSAKYVP-FNAGPDSPEFYSLDEIVY-RSR-SGGLL 107 (521)
Q Consensus 71 ~~~~~~~~~v~-~~~~~~cg~~~~~~~~~~-~c~-cGGll 107 (521)
+...+-.+.+| ...|+.||.+|..++... .|+ ||+..
T Consensus 61 e~a~L~i~~~p~~~~C~~CG~~~e~~~~~~~~CP~Cgs~~ 100 (119)
T 2kdx_A 61 KDAILDIVDEKVELECKDCSHVFKPNALDYGVCEKCHSKN 100 (119)
T ss_dssp SSCCEEEEEECCEEECSSSSCEECSCCSTTCCCSSSSSCC
T ss_pred cCcEEEEEeccceEEcCCCCCEEeCCCCCCCcCccccCCC
Confidence 43333333333 334999999999988888 896 98873
No 48
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=58.82 E-value=5.5 Score=35.71 Aligned_cols=51 Identities=16% Similarity=-0.007 Sum_probs=33.3
Q ss_pred cccCCcchHHHHHhcCCC--CCC-----ccceeecCCCCCCCCCCccCCCCceeecC-CCCcc
Q 009957 53 RRAADENIRDEARRQRST--TNN-----TFSAKYVPFNAGPDSPEFYSLDEIVYRSR-SGGLL 107 (521)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~v~~~~~~~cg~~~~~~~~~~~c~-cGGll 107 (521)
....+.++|+.|+...-. ... ...-.|+ |.+||+.|+-......|+ ||+.+
T Consensus 100 lvT~D~~l~~vA~~~Gv~v~~~~~~i~~~~~~~y~----C~~Cg~~~~~~~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 100 IFSDDYNVQNIASLLGLRFRTLKRGIKKVIKWRYV----CIGCGRKFSTLPPGGVCPDCGSKV 158 (165)
T ss_dssp EECCCHHHHHHHHHTTCCEECCSCCCSSCCCCCEE----ESSSCCEESSCCGGGBCTTTCCBE
T ss_pred EEcCcHHHHHHHHHCCCeEEchhhhccccccEEEE----CCCCCCcccCCCCCCcCCCCCCcc
Confidence 345566899999987554 222 1222455 999999998443334695 99874
No 49
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=57.35 E-value=20 Score=34.46 Aligned_cols=69 Identities=12% Similarity=0.045 Sum_probs=46.9
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhH----HhHHhCCCEEEEECC---CHHHHHHHHHHHHhcCC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQL----VQPIANGAFVLSIDT---DFDGCMKLIREVTSELP 292 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~----~q~~~~GA~Vi~v~g---~~dd~~~~~~~~~~~~~ 292 (521)
...+|+..++.-|.++|..-++.|-++++.- . +..++ .++...|.+++.+.. +.+++.+.+++..++.+
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~-~---~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVE-L---LEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-S---CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEE-C---CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578888888889999977788998876643 2 22232 235677887766654 46677777777766643
No 50
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=54.23 E-value=57 Score=30.52 Aligned_cols=71 Identities=10% Similarity=0.043 Sum_probs=45.1
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
...+|+..+|.-|.++|..-.+.|.+++++.-.......-...+...|.++..+..| .++..+.++++.++
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 356888888888999998888889987776533211111223355668777666654 44555566655544
No 51
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=53.78 E-value=1.4e+02 Score=27.64 Aligned_cols=150 Identities=14% Similarity=0.145 Sum_probs=71.5
Q ss_pred HHHHHHHHHhcCCCCCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchhhHHHhhCCcceeeccccc
Q 009957 308 KTAAVEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPLYLYYKSGWKDFKAVKAST 387 (521)
Q Consensus 308 ~T~a~EI~eQl~~~~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l~~~~~~G~~~~~~~~~~~ 387 (521)
-.++.|=+++++ .+.|||++-+|-+..-++..| . ..+||+|.-... + -+.|..++.+. ...
T Consensus 32 l~la~era~e~~---Ik~iVVAS~sG~TA~k~~e~~-----~-----~i~lVvVTh~~G--F---~~pg~~e~~~e-~~~ 92 (201)
T 1vp8_A 32 LRLAVERAKELG---IKHLVVASSYGDTAMKALEMA-----E-----GLEVVVVTYHTG--F---VREGENTMPPE-VEE 92 (201)
T ss_dssp HHHHHHHHHHHT---CCEEEEECSSSHHHHHHHHHC-----T-----TCEEEEEECCTT--S---SSTTCCSSCHH-HHH
T ss_pred HHHHHHHHHHcC---CCEEEEEeCCChHHHHHHHHh-----c-----CCeEEEEeCcCC--C---CCCCCCcCCHH-HHH
Confidence 345556566665 679999999998886555322 2 248998873220 0 00111000000 000
Q ss_pred ch-hhhhccC----CCccHHHHHHHHHhcCCeEEEeCHHHHH-HHHHHHHhcCCeeccchHHHHHHHHHHHhcCCCCCCC
Q 009957 388 TF-ASAIQIG----DPVSIDRAVYALKNCNGIVEEATEEELM-DAMAQADSTGMFICPHTGVALTALIKLRNSGVIGPLD 461 (521)
Q Consensus 388 Ti-a~~i~i~----~P~~~~~~l~~l~~~~g~~v~Vsd~Ei~-~A~~~l~~eGi~~ePssA~alAa~~~l~~~g~i~~~~ 461 (521)
.+ ..|..|- .=+..+|.+. +..+| ++..|++ +++|.+--.|+-+ |+-..+-..+.|.|+- +
T Consensus 93 ~L~~~G~~V~t~tH~lsgveR~is--~kfGG----~~p~eiiA~tLR~~fgqG~KV------~vEi~lMAaDAGlIp~-e 159 (201)
T 1vp8_A 93 ELRKRGAKIVRQSHILSGLERSIS--RKLGG----VSRTEAIAEALRSLFGHGLKV------CVEITIMAADSGAIPI-E 159 (201)
T ss_dssp HHHHTTCEEEECCCTTTTTHHHHH--HHTCC----CCHHHHHHHHHHHHHCHHHHH------HHHHHHHHHHTTSSCS-S
T ss_pred HHHhCCCEEEEEeccccchhHHHH--HhcCC----CCHHHHHHHHHHHHhcCCceE------EEEEeeeecccCCCCc-c
Confidence 00 0011100 1122344432 23333 4677766 4555233345443 3333333357888887 6
Q ss_pred eEEEE-eCCCCCCchHHHHhhhcchhHHh
Q 009957 462 RTVVV-STAHGLKFTQSKIDYHSKEIKDM 489 (521)
Q Consensus 462 ~vV~v-~TG~g~K~~~~~~~~~~~~~~~~ 489 (521)
.||.+ -|++|....-.+.-.|...+.++
T Consensus 160 eVIAiGGT~~GaDTAlVirPAhs~~ffdl 188 (201)
T 1vp8_A 160 EVVAVGGRSRGADTAVVIRPAHMNNFFDA 188 (201)
T ss_dssp CEEEEECSSSSCCEEEEEECCCTTSGGGC
T ss_pred eEEEEccccCCcceEEEEeecccCCchhe
Confidence 66665 67777764433333455555443
No 52
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=51.93 E-value=36 Score=32.48 Aligned_cols=71 Identities=14% Similarity=0.063 Sum_probs=43.8
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC---CHHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT---DFDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~~~~~ 290 (521)
...+|+..+|--|.++|..-.+.|.+++++.-.......-...+...|.++..+.. +.+++.+.++++.++
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35788888888899999888888998777654321111112334556655554444 345556666665554
No 53
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=51.88 E-value=3.2 Score=36.52 Aligned_cols=23 Identities=13% Similarity=0.059 Sum_probs=19.0
Q ss_pred CCCCCCCccCCCC-----------c----------eeecC-CCCc
Q 009957 84 AGPDSPEFYSLDE-----------I----------VYRSR-SGGL 106 (521)
Q Consensus 84 ~~~~cg~~~~~~~-----------~----------~~~c~-cGGl 106 (521)
.|+.||.++..++ . .+.|+ ||+.
T Consensus 72 ~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~ 116 (139)
T 3a43_A 72 KCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSH 116 (139)
T ss_dssp EETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCC
T ss_pred ECCCCCCEEecccccccccccccccccccccccccCCcCccccCC
Confidence 4999999999877 5 56796 9886
No 54
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=51.82 E-value=7.8 Score=27.51 Aligned_cols=22 Identities=9% Similarity=0.063 Sum_probs=16.9
Q ss_pred CCCCCCCccCCCCcee----ecC-CCC
Q 009957 84 AGPDSPEFYSLDEIVY----RSR-SGG 105 (521)
Q Consensus 84 ~~~~cg~~~~~~~~~~----~c~-cGG 105 (521)
+|-+||++++.+|... +|+ ||-
T Consensus 5 ~C~rCg~~fs~~el~~lP~IrCpyCGy 31 (48)
T 4ayb_P 5 RCGKCWKTFTDEQLKVLPGVRCPYCGY 31 (48)
T ss_dssp CCCCTTTTCCCCCSCCCSSSCCTTTCC
T ss_pred EeeccCCCccHHHHhhCCCcccCccCc
Confidence 3999999999887643 485 773
No 55
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=51.78 E-value=1.2e+02 Score=28.15 Aligned_cols=66 Identities=21% Similarity=0.251 Sum_probs=37.6
Q ss_pred eCHHHHHHHHHHHHhcCCeeccchHHHHHHHHHHHhcCCCCCCCeEEEE-eCCCCCCchHHHHhhhcchhHHh
Q 009957 418 ATEEELMDAMAQADSTGMFICPHTGVALTALIKLRNSGVIGPLDRTVVV-STAHGLKFTQSKIDYHSKEIKDM 489 (521)
Q Consensus 418 Vsd~Ei~~A~~~l~~eGi~~ePssA~alAa~~~l~~~g~i~~~~~vV~v-~TG~g~K~~~~~~~~~~~~~~~~ 489 (521)
++..|+++...++--.|+- +++-..+-..+.|.|+-++.||.+ -|+.|....-.+.-.|...+.++
T Consensus 129 ~~p~eiiA~tLR~fgqG~K------V~vEi~lMAaDAGlIp~geeVIAiGGT~~GaDTAlVirPAhs~~ffdl 195 (206)
T 1t57_A 129 VTPVEIMAETLRMVSQGFK------VCVEIAIMAADAGLIPVDEEVIAIGGTAWGADTALVLTPAHMNSVFDL 195 (206)
T ss_dssp CCHHHHHHHHHTTTCHHHH------HHHHHHHHHHHTTSSCSSSCEEEEECSSSSCCEEEEEECCCGGGGGGC
T ss_pred CCHHHHHHHHHHHhCCCce------EEEEEeeeeecCCCCCCCCeEEEEccccCCcceEEEEeecccCCccee
Confidence 4677766443322223433 333333344678999888888777 67777765433433555555543
No 56
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=51.01 E-value=87 Score=28.47 Aligned_cols=51 Identities=12% Similarity=0.103 Sum_probs=36.7
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCC-EEEEEC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGA-FVLSID 274 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA-~Vi~v~ 274 (521)
.+.+|+..||..|.+++......|.+++++.-.. .+...+...++ +++..|
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~----~~~~~~~~~~~~~~~~~D 73 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE----EQGPELRERGASDIVVAN 73 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG----GGHHHHHHTTCSEEEECC
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh----HHHHHHHhCCCceEEEcc
Confidence 4678889999999999988888899888876432 24444555577 766544
No 57
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=50.58 E-value=31 Score=32.10 Aligned_cols=73 Identities=12% Similarity=0.096 Sum_probs=45.8
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCH-HhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcCC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISI-AQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSELP 292 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~-~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~~ 292 (521)
...+|+..+|--|.++|..-.+.|.++++..-.+.... ..+..+...|.++..+..| .++..+.++++.++.+
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG 90 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 45677777788899999888888998877662221222 2233455667666555543 4556666666655543
No 58
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=50.43 E-value=5.5 Score=39.39 Aligned_cols=59 Identities=7% Similarity=0.046 Sum_probs=35.8
Q ss_pred eEEEEeCCchH--HHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHH
Q 009957 221 VGVGCASTGDT--SAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREV 287 (521)
Q Consensus 221 ~~Vv~aSSGN~--g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~ 287 (521)
..|+..||++. ++.+..++...|.+++++=++. +.... .-+. +.+.|+.++..++++.+
T Consensus 219 llLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~-t~~~~------~~~d-~~i~g~a~~vl~~~~~l 279 (290)
T 3u31_A 219 LLLVIGTSSTVSTATNLCHFACKKKKKIVEINISK-TYITN------KMSD-YHVCAKFSELTKVANIL 279 (290)
T ss_dssp EEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESSC-CTTTT------TTCS-EEEESCGGGHHHHHHHH
T ss_pred EEEEECcCCcchhHHHHHHHHHHcCCEEEEECCCC-CCCCC------ccce-EEEECCHHHHHHHHHHH
Confidence 34666888876 6677777888899988877663 22100 0123 33567777666655544
No 59
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=49.71 E-value=24 Score=33.92 Aligned_cols=69 Identities=14% Similarity=-0.048 Sum_probs=46.7
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhH----HhHHhCCCEEEEECCC---HHHHHHHHHHHHhcCC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQL----VQPIANGAFVLSIDTD---FDGCMKLIREVTSELP 292 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~----~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~~ 292 (521)
...||+..++.-|.++|..-++.|-++++..- +..++ ..+...|.+++.+..| .+++.+.++++.++.+
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~----~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDI----RATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCS----CHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 35688888788899999888889988766432 22232 3356678777776654 5566777777766654
No 60
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=49.57 E-value=38 Score=32.42 Aligned_cols=71 Identities=14% Similarity=0.064 Sum_probs=44.1
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC---CHHHHHHHHHHHHhcC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT---DFDGCMKLIREVTSEL 291 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~~~~~~ 291 (521)
...+|+..++.-|.++|..-++.|-+++++.-.. ........+...|.++..+.. +.+++.+.+++..++.
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHA-PDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-CCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCc-ccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 3578888888889999988888899888776443 233334445455544444433 3455555665555543
No 61
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=46.95 E-value=45 Score=30.93 Aligned_cols=70 Identities=20% Similarity=0.206 Sum_probs=43.3
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
...+|+..+|.-|.++|..-.+.|.+++++--.. ....+ ..++...|.++..+..| .++..+.++++.++
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINA-EAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578888888899999988888899877654321 11111 22345667777666655 34445555555443
No 62
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=46.49 E-value=47 Score=31.30 Aligned_cols=72 Identities=19% Similarity=0.123 Sum_probs=44.2
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
...+|+..+|--|.++|..-.+.|.++++..-....-..-..++...|.++..+..| .+++.+.++++.++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 357888888888999998888889987765432100011122345567666666544 445566666665554
No 63
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=46.12 E-value=40 Score=31.71 Aligned_cols=72 Identities=14% Similarity=0.075 Sum_probs=45.5
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCC-HHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKIS-IAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
...+|+..+|--|.++|..-.+.|.++++..-.+... ......+...|.++..+..| .+++.+.++++.++.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3578888888889999988888899988774433111 11123355567665555443 555666666665553
No 64
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=45.16 E-value=42 Score=30.99 Aligned_cols=70 Identities=11% Similarity=0.075 Sum_probs=43.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|.-|.++|..-.+.|.+++++.-... ...+ ...+...|.++..+..| .++..+.++++.++.
T Consensus 7 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 7 VALVTGASRGIGFEVAHALASKGATVVGTATSQA-SAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5678788888899999888888998776654321 1111 22345567666555544 445556666665543
No 65
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=44.88 E-value=2.1e+02 Score=27.06 Aligned_cols=70 Identities=13% Similarity=0.068 Sum_probs=41.5
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcC-C-----H-HhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKI-S-----I-AQLVQPIANGAFVLSIDTD---FDGCMKLIREVTS 289 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~-s-----~-~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 289 (521)
...+|+..+|.-|.++|..-.+.|.+++++.-.... . . .....+...|.++..+..| .+++.+.++++.+
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 89 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVE 89 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 357888888888999998888889987776533210 0 0 1122344557777666544 3334444444433
No 66
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=44.66 E-value=71 Score=29.70 Aligned_cols=68 Identities=15% Similarity=0.095 Sum_probs=43.8
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-.. .......+...|.++..+..| .++..+.++++.++
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (255)
T 2q2v_A 6 TALVTGSTSGIGLGIAQVLARAGANIVLNGFGD--PAPALAEIARHGVKAVHHPADLSDVAQIEALFALAERE 76 (255)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 567888888899999988888899877764332 233334455567777666655 34445555554443
No 67
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=44.31 E-value=42 Score=31.93 Aligned_cols=72 Identities=17% Similarity=0.129 Sum_probs=45.9
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcC-CHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKI-SIAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~-s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
...+|+..+|--|.++|..-.+.|.++++..-.... .......+...|.++..+..| .+++.+.++++.++.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 357888888888999998888899998776433210 111123355667777666654 445566666665543
No 68
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=44.01 E-value=53 Score=31.02 Aligned_cols=69 Identities=10% Similarity=0.005 Sum_probs=42.2
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.+++......|.+++++.-.. ....+ ...+...|.++..+..| .++..+.++++.++
T Consensus 33 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 33 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK-HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEEcCH-HHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 578888889999999988888898877654321 11111 12344556666555544 44455566655544
No 69
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=43.91 E-value=67 Score=29.99 Aligned_cols=70 Identities=14% Similarity=0.067 Sum_probs=43.5
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-.. ....+ ...+...|.++..+..| .++..+.++++.++.
T Consensus 11 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 11 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQ-KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 578888889999999988888898877664221 01111 12344557777666554 445556666655543
No 70
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=43.64 E-value=45 Score=30.91 Aligned_cols=70 Identities=17% Similarity=0.124 Sum_probs=41.4
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTS 289 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 289 (521)
...+|+..+|.-|.+++......|.+++++.-...........+...|.++..+..| .++..+.++++.+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 357888888999999998888889887776432110011122344556656555544 3444455554443
No 71
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=43.11 E-value=1.4e+02 Score=29.57 Aligned_cols=33 Identities=21% Similarity=0.156 Sum_probs=28.1
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPA 252 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~ 252 (521)
++-|--.|||-.|.++|-++.+.|-.|+++.-.
T Consensus 56 VRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 56 VRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp SEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred eeEecCCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence 555666889999999999999999999988744
No 72
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=42.40 E-value=1e+02 Score=28.97 Aligned_cols=70 Identities=19% Similarity=0.142 Sum_probs=42.3
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
...+|+..+|--|.++|..-.+.|.+++++--.. ....+...-....+..+.+| .+.+++.+.++++.++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPE-TDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDT 82 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT-SCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 3578888888889999988888999877665332 22222222112234455555 3455566666666554
No 73
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=42.28 E-value=58 Score=30.92 Aligned_cols=70 Identities=13% Similarity=0.106 Sum_probs=42.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|.-|.+++....+.|.+++++.-.. ....+ ...+...|.++..+..| .++..+.++++.++.
T Consensus 24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGE-EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 578888889999999988888898877654221 01111 12344556666555544 445555666655543
No 74
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=42.08 E-value=54 Score=31.06 Aligned_cols=71 Identities=17% Similarity=0.182 Sum_probs=45.5
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
...+|+..+|.-|.++|..-.+.|.++++..-.+.....+ ...+...|.++..+..| .+++.+.++++.++
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3578888888889999988888899988865443111111 22345667776666544 45566666665554
No 75
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=42.07 E-value=1.2e+02 Score=30.03 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=50.5
Q ss_pred CCchHHHHHHHHHHhcCCCEEEEccCCcCC--------------HHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC
Q 009957 227 STGDTSAALSAYCASAGIPSIVFLPANKIS--------------IAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP 292 (521)
Q Consensus 227 SSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s--------------~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~ 292 (521)
.+|-.|..++..+++.|++++++.|....+ ...+..+. .+.+++...-.... ...++ .+++.+
T Consensus 6 G~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~a~~~~~~~~d~~~l~~~~-~~~d~v~~~~e~~~-~~~~~-~l~~~g 82 (369)
T 3aw8_A 6 GGGQLGRMLALAGYPLGLSFRFLDPSPEACAGQVGELVVGEFLDEGALLRFA-EGLALVTYEFENVP-VEAAR-RLEGRL 82 (369)
T ss_dssp CCSHHHHHHHHHHTTBTCCEEEEESCTTCGGGGTSEEEECCTTCHHHHHHHH-TTCSEEEECCTTCC-HHHHH-HHHHHS
T ss_pred CCCHHHHHHHHHHHHcCCEEEEEeCCCCChHHHhhceEecCCCCHHHHHHHH-hCCCEEEECCCCcC-HHHHH-HHHHcC
Confidence 346677777777888888887777653111 11111111 45555543321111 12222 334445
Q ss_pred ccccCCCChHhHhhHHHHHHHHHHhcCCCCCcEE
Q 009957 293 IYLANSLNSLRLEGQKTAAVEILQQFDWEVPDWV 326 (521)
Q Consensus 293 ~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pD~V 326 (521)
+..++.....+...|....+++++.+-..|.+.
T Consensus 83 -~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~ 115 (369)
T 3aw8_A 83 -PLYPPAKALEVAQDRLREKTFFQGLGVPTPPFH 115 (369)
T ss_dssp -CBSSCHHHHHHHTCHHHHHHHHHHHTCCCCCEE
T ss_pred -CcCCCHHHHHHhcCHHHHHHHHHHCCCCCCCce
Confidence 444444556677788888888877653344443
No 76
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=41.67 E-value=76 Score=29.11 Aligned_cols=69 Identities=17% Similarity=0.173 Sum_probs=42.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCCH---HHHHHHHHHHHh
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTDF---DGCMKLIREVTS 289 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~~~ 289 (521)
..+|+..+|--|.+++..-...|.+++++.-.......+ ...+...|.++..+.+|. ++..+.++++.+
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 9 RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA 81 (258)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 567888888889999988888899877765431112212 233455677776666553 344445554443
No 77
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=41.65 E-value=44 Score=31.99 Aligned_cols=69 Identities=10% Similarity=0.122 Sum_probs=43.1
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.++|..-.+.|.+++++.-.. ....+ ...+...|.++..+..| .+++.+.++++.++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 30 VALITGAGSGIGRATALALAADGVTVGALGRTR-TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 568888888889999988888899877764321 11111 12244566666666544 44555666665554
No 78
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=41.50 E-value=12 Score=27.11 Aligned_cols=14 Identities=21% Similarity=0.047 Sum_probs=11.2
Q ss_pred eeecCCCCCCCCCCccCC
Q 009957 77 AKYVPFNAGPDSPEFYSL 94 (521)
Q Consensus 77 ~~~v~~~~~~~cg~~~~~ 94 (521)
.+|+ |+.||..|+.
T Consensus 2 ~~y~----C~~CGyvYd~ 15 (52)
T 1e8j_A 2 DIYV----CTVCGYEYDP 15 (52)
T ss_dssp CCEE----CSSSCCCCCT
T ss_pred CcEE----eCCCCeEEcC
Confidence 3677 9999999874
No 79
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=41.05 E-value=59 Score=29.78 Aligned_cols=57 Identities=14% Similarity=0.070 Sum_probs=36.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCCH
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTDF 277 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~~ 277 (521)
..+|+..+|.-|.+++......|.+++++.-.+.....+ ...+...|.++..+..|.
T Consensus 7 ~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~ 64 (247)
T 2hq1_A 7 TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDV 64 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCT
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCC
Confidence 568888889999999988888899887773322111111 223445676666665553
No 80
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=40.68 E-value=72 Score=30.01 Aligned_cols=68 Identities=13% Similarity=0.056 Sum_probs=45.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEEC-CCHHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID-TDFDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~-g~~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|--|.++|..-.+.|.+++++.-.. .. ....+...|+..+.+| .+.+++.+.++++.++.
T Consensus 29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 29 PILITGASQRVGLHCALRLLEHGHRVIISYRTE--HA-SVTELRQAGAVALYGDFSCETGIMAFIDLLKTQT 97 (260)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC--CH-HHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh--HH-HHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 567888888889999988888899987765432 22 1233445577777666 34556666676666554
No 81
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=40.62 E-value=56 Score=30.38 Aligned_cols=66 Identities=17% Similarity=0.169 Sum_probs=41.2
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHH----hHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLV----QPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-. ..++. .+...|.++..+..| .++..+.++++.++
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 9 VALITGASSGIGEATARALAAEGAAVAIAARR----VEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 57888888999999998888889887765422 22222 234456666555544 44455555555443
No 82
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=40.57 E-value=49 Score=31.53 Aligned_cols=70 Identities=16% Similarity=0.024 Sum_probs=42.9
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++.-.......-...+...|.++..+..| .++..+.++++.++
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 57888888888999998778889987665432100011122345567766655544 44555666665554
No 83
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=40.55 E-value=41 Score=31.59 Aligned_cols=71 Identities=13% Similarity=0.106 Sum_probs=42.9
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
...+|+..+|--|.++|..-.+.|.+++++.-.......-...+...|.++..+..| .+++.+.++++.++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 356888888888999998778889987765432110011122345667777666544 44555555555544
No 84
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=40.33 E-value=9.3 Score=27.06 Aligned_cols=15 Identities=27% Similarity=0.111 Sum_probs=11.6
Q ss_pred ceeecCCCCCCCCCCccCC
Q 009957 76 SAKYVPFNAGPDSPEFYSL 94 (521)
Q Consensus 76 ~~~~v~~~~~~~cg~~~~~ 94 (521)
+.+|+ |+.||..|+.
T Consensus 2 m~~y~----C~vCGyvyd~ 16 (46)
T 6rxn_A 2 MQKYV----CNVCGYEYDP 16 (46)
T ss_dssp CCCEE----ETTTCCEECG
T ss_pred CCEEE----CCCCCeEEeC
Confidence 34677 9999998873
No 85
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=39.95 E-value=65 Score=29.99 Aligned_cols=70 Identities=10% Similarity=0.122 Sum_probs=41.9
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-.. ....+ ...+...|.++..+..| .++..+.++++.++.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYND-ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 468888888899999988888898877654221 01111 12244456666555544 444555666555543
No 86
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=39.80 E-value=15 Score=27.78 Aligned_cols=29 Identities=17% Similarity=0.211 Sum_probs=21.8
Q ss_pred cceeecCCCCCCCCCCccCCCC-ceeec-CCCCcc
Q 009957 75 FSAKYVPFNAGPDSPEFYSLDE-IVYRS-RSGGLL 107 (521)
Q Consensus 75 ~~~~~v~~~~~~~cg~~~~~~~-~~~~c-~cGGll 107 (521)
.-|.|+ |..||.+++++. ...+| .||.=.
T Consensus 18 ~~v~Y~----C~~Cg~~~~l~~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 18 ATMIYL----CADCGARNTIQAKEVIRCRECGHRV 48 (63)
T ss_dssp -CCCCB----CSSSCCBCCCCSSSCCCCSSSCCCC
T ss_pred CCeEEE----CCCCCCeeecCCCCceECCCCCcEE
Confidence 368898 999999998873 34679 588643
No 87
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=39.65 E-value=53 Score=30.79 Aligned_cols=68 Identities=18% Similarity=0.126 Sum_probs=40.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCCH---HHHHHHHHHHHh
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTDF---DGCMKLIREVTS 289 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~~~ 289 (521)
..+|+..+|--|.++|..-...|.+++++.-.. ....+ ...+...|.++..+..|. ++..+.++++.+
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDV-EKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 567777778889999988788899876654321 11111 123455677776665543 344444444433
No 88
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=39.54 E-value=64 Score=30.91 Aligned_cols=70 Identities=11% Similarity=0.071 Sum_probs=44.5
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++.-.......+ ...+...|.++..+..| .+++.+.++++.++
T Consensus 49 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 49 NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 578888888889999988888899887765432101111 22345677777666654 44555566655544
No 89
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=39.51 E-value=52 Score=31.24 Aligned_cols=69 Identities=12% Similarity=0.069 Sum_probs=43.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++.-.. ....+ ...+...|.++..+..| .++..+.++++.++
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQ-ARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567888888889999988888999877654221 11111 12345668777666544 45556666666554
No 90
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=39.34 E-value=1.2e+02 Score=29.47 Aligned_cols=54 Identities=13% Similarity=0.024 Sum_probs=37.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHH---hHHhCCCEEEEEC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLV---QPIANGAFVLSID 274 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~---q~~~~GA~Vi~v~ 274 (521)
+.+|++.||..|.+++......|.+++++.-.....+.+.. .+...|++++..|
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~D 68 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGL 68 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECC
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEee
Confidence 46888899999999998888889998888743212334443 3445677776554
No 91
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=39.14 E-value=57 Score=30.79 Aligned_cols=70 Identities=17% Similarity=0.182 Sum_probs=45.0
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.++++..-.+.....+ ...+...|.++..+..| .+++.+.++++.++
T Consensus 20 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 20 VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567777878889999988888899888865443111111 23355677777666544 45566666666554
No 92
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=39.10 E-value=46 Score=31.30 Aligned_cols=70 Identities=11% Similarity=0.102 Sum_probs=44.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.++++..-.+.....+ ..++...|.++..+..| .++..+.++++.++
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567888888889999988888999988865443111111 22345567777666554 44556666665544
No 93
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=38.82 E-value=34 Score=32.17 Aligned_cols=66 Identities=14% Similarity=0.170 Sum_probs=41.8
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHH----hHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLV----QPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++.-. ..++. .+...|.++..+..| .+++.+.++++.++
T Consensus 8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 8 VVIITGGSSGMGKGMATRFAKEGARVVITGRT----KEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56777777888999998888889987665422 22222 234556666555544 45556666666554
No 94
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=38.82 E-value=99 Score=28.99 Aligned_cols=70 Identities=16% Similarity=0.050 Sum_probs=46.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHH----hHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLV----QPIANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|--|.++|..-.+.|.+++++.-.. .+..++. .+...|.++..+..| .+++.+.++++.++.
T Consensus 13 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 13 VIVIAGGIKNLGALTAKTFALESVNLVLHYHQA-KDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp EEEEETCSSHHHHHHHHHHTTSSCEEEEEESCG-GGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEecCc-cCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 568888888889999988888999988775332 1222222 345568887766654 555666666665553
No 95
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=38.67 E-value=99 Score=30.68 Aligned_cols=26 Identities=15% Similarity=0.328 Sum_probs=15.2
Q ss_pred eCCchHHHHHHHHHHhcCCCEEEEcc
Q 009957 226 ASTGDTSAALSAYCASAGIPSIVFLP 251 (521)
Q Consensus 226 aSSGN~g~AlAa~aa~~Gi~~~V~vP 251 (521)
..+|..|..++..+++.|++++++.+
T Consensus 17 ~g~g~~~~~~~~a~~~~G~~v~~~~~ 42 (391)
T 1kjq_A 17 LGSGELGKEVAIECQRLGVEVIAVDR 42 (391)
T ss_dssp ESCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred ECCCHHHHHHHHHHHHcCCEEEEEEC
Confidence 34455566666666666666655554
No 96
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=38.50 E-value=1.2e+02 Score=30.72 Aligned_cols=40 Identities=5% Similarity=0.060 Sum_probs=19.4
Q ss_pred HhcCCccccCCCChHhHhhHHHHHHHHH-HhcCCCCCcEEE
Q 009957 288 TSELPIYLANSLNSLRLEGQKTAAVEIL-QQFDWEVPDWVI 327 (521)
Q Consensus 288 ~~~~~~~~~ns~Np~~i~G~~T~a~EI~-eQl~~~~pD~Vv 327 (521)
+++.+.+..++.....+..-|....+++ ++.+-..|.+.+
T Consensus 101 l~~~gi~~~~~~~~~~~~~dK~~~k~~l~~~~gip~p~~~~ 141 (433)
T 2dwc_A 101 FEKDGYFVVPNARATWIAMHRERLRETLVKEAKVPTSRYMY 141 (433)
T ss_dssp HHHTTCCBSSCHHHHHHHHCHHHHHHHHHHTSCCCCCCEEE
T ss_pred HHhcCCeeCCCHHHHHHhhCHHHHHHHHHHhcCCCCCCeeE
Confidence 3444443333333445666666666666 555422344433
No 97
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=38.46 E-value=57 Score=31.47 Aligned_cols=70 Identities=14% Similarity=0.059 Sum_probs=43.0
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
...+|+..||.-|.++|....+.|.+++++.-.. ....+ ...+...|.++..+..| .++..+.++++.++
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQ-PALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 3578888888889999988888998876654321 11111 12344567666555543 45556666665544
No 98
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=38.30 E-value=65 Score=30.30 Aligned_cols=70 Identities=17% Similarity=0.142 Sum_probs=44.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.++|..-.+.|.++++..-.+.....+ ...+...|.++..+..| .++..+.++++.++
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 567778888889999988888999987765443111111 22345678787777655 34455555555443
No 99
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=38.26 E-value=59 Score=31.28 Aligned_cols=70 Identities=16% Similarity=0.142 Sum_probs=41.9
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-.. ....+ ...+...|.++..+..| .++..+.++++.++.
T Consensus 36 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 36 IALVTGASYGIGFAIASAYAKAGATIVFNDINQ-ELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 578888889999999988888898877654221 01111 12344456554444433 445556666655544
No 100
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=37.95 E-value=78 Score=30.74 Aligned_cols=70 Identities=16% Similarity=0.134 Sum_probs=45.2
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccC----------CcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHH
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPA----------NKISIAQLVQPIANGAFVLSIDTD---FDGCMKLIREV 287 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~----------~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~ 287 (521)
..+|+..+|.-|.++|..-.+.|.+++++.-. ..........+...|.++..+..| .+++.+.++++
T Consensus 29 ~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 108 (322)
T 3qlj_A 29 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTA 108 (322)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 56777777888999998888889988877422 100111223356678888877765 44556666666
Q ss_pred Hhc
Q 009957 288 TSE 290 (521)
Q Consensus 288 ~~~ 290 (521)
.++
T Consensus 109 ~~~ 111 (322)
T 3qlj_A 109 VET 111 (322)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 101
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=37.89 E-value=97 Score=29.40 Aligned_cols=68 Identities=7% Similarity=-0.094 Sum_probs=46.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC---CHHHHHHHHHHHHhcCC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT---DFDGCMKLIREVTSELP 292 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~~~~~~~ 292 (521)
+.||+..++.-|.++|..-++.|-++++..- ++.+..++...+.++..+.. +.+++.+.+++..++.+
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g 74 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDI----DEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQ 74 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4688888888899999888899998877532 34555666655655555544 45566677776666543
No 102
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=37.77 E-value=1.2e+02 Score=28.16 Aligned_cols=102 Identities=14% Similarity=0.048 Sum_probs=56.8
Q ss_pred EEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh--HHhCCCEEEEEC--CCHHHHHHHHHHHHhcCCccccCC
Q 009957 223 VGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ--PIANGAFVLSID--TDFDGCMKLIREVTSELPIYLANS 298 (521)
Q Consensus 223 Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q--~~~~GA~Vi~v~--g~~dd~~~~~~~~~~~~~~~~~ns 298 (521)
|+....+.++..++..+++.|++++++-+... .. ++.. ......+++.+. +++. ...+.+++++.+.-+.|+
T Consensus 4 il~~~~~~~~~~~~~a~~~~G~~v~~~~~~~~-~~-~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~~~g~~~~~~ 79 (280)
T 1uc8_A 4 ILYDRIRPDERMLFERAEALGLPYKKVYVPAL-PM-VLGERPKELEGVTVALERCVSQSR--GLAAARYLTALGIPVVNR 79 (280)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCEEEEEGGGC-CE-ETTBCCGGGTTCCEEEECCSSHHH--HHHHHHHHHHTTCCEESC
T ss_pred EEecCCCHHHHHHHHHHHHcCCcEEEEehhhc-ee-eccCCCcccCCCCEEEECCccchh--hHHHHHHHHHCCCceeCC
Confidence 44444456688899999999999998877642 21 1100 001234422232 3332 223444555666544454
Q ss_pred CChHhHhhHHHHHHHHHHhcCCCCCcEEEE
Q 009957 299 LNSLRLEGQKTAAVEILQQFDWEVPDWVIV 328 (521)
Q Consensus 299 ~Np~~i~G~~T~a~EI~eQl~~~~pD~VvV 328 (521)
.....+..-|....+++++.+-..|.++++
T Consensus 80 ~~~~~~~~dK~~~~~~l~~~gi~~p~~~~~ 109 (280)
T 1uc8_A 80 PEVIEACGDKWATSVALAKAGLPQPKTALA 109 (280)
T ss_dssp HHHHHHHHBHHHHHHHHHHTTCCCCCEEEE
T ss_pred HHHHHHhCCHHHHHHHHHHcCcCCCCeEee
Confidence 334456667778888888776445555544
No 103
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=37.74 E-value=78 Score=29.99 Aligned_cols=27 Identities=22% Similarity=0.219 Sum_probs=23.3
Q ss_pred eCCchHHHHHHHHHHhcCCCEEEEccC
Q 009957 226 ASTGDTSAALSAYCASAGIPSIVFLPA 252 (521)
Q Consensus 226 aSSGN~g~AlAa~aa~~Gi~~~V~vP~ 252 (521)
.|||-.|.++|-++.+.|-+|+++.-.
T Consensus 26 ~SSG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 26 HSTGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 448999999999999999999888743
No 104
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=37.47 E-value=46 Score=31.55 Aligned_cols=70 Identities=14% Similarity=0.143 Sum_probs=43.0
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.++++..-.+.....+ ...+...|.++..+..| .++..+.++++.++
T Consensus 30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 30 IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 567777778889999988888899888765432111111 22345667777666554 34455555555444
No 105
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=37.43 E-value=1.5e+02 Score=29.40 Aligned_cols=98 Identities=17% Similarity=0.239 Sum_probs=48.7
Q ss_pred CCchHHHHHHHHHHhcCCCEEEEccCCcCCH---------------HhHHhHHhCCCEEEEECC-CHHHHHHHHHHHHhc
Q 009957 227 STGDTSAALSAYCASAGIPSIVFLPANKISI---------------AQLVQPIANGAFVLSIDT-DFDGCMKLIREVTSE 290 (521)
Q Consensus 227 SSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~---------------~k~~q~~~~GA~Vi~v~g-~~dd~~~~~~~~~~~ 290 (521)
.+|..|..++..+++.|++++++-|....+. ..+..+. .+..++...- +.. ...+ +.+++
T Consensus 8 g~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~-~~~d~v~~~~e~~~--~~~~-~~l~~ 83 (380)
T 3ax6_A 8 GGGQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAGFFDSERIEDLV-KGSDVTTYDLEHID--VQTL-KKLYN 83 (380)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGSSEEEECCTTCHHHHHHHH-HTCSEEEESCSCSC--HHHH-HHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhCceEEECCCCCHHHHHHHH-hcCCEEEecccCCC--HHHH-HHHHH
Confidence 4466677777777778887777766421111 1111111 2333333321 111 1112 22344
Q ss_pred CCccccCCCChHhHhhHHHHHHHHHHhcCCCCCcEEEE
Q 009957 291 LPIYLANSLNSLRLEGQKTAAVEILQQFDWEVPDWVIV 328 (521)
Q Consensus 291 ~~~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pD~VvV 328 (521)
.+.-..++.....+..-|....+++++.+-..|.+..+
T Consensus 84 ~gi~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~ 121 (380)
T 3ax6_A 84 EGYKIHPSPYTLEIIQDKFVQKEFLKKNGIPVPEYKLV 121 (380)
T ss_dssp TTCEESSCHHHHHHHHSHHHHHHHHHHTTCCCCCEEEC
T ss_pred CCCeECCCHHHHHHhcCHHHHHHHHHHcCCCCCCeEEe
Confidence 45432344444567777778888888766334554443
No 106
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=37.22 E-value=63 Score=30.25 Aligned_cols=69 Identities=13% Similarity=0.086 Sum_probs=41.3
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-...|.+++++.-.. ....+ ...+...|.++..+..| .++..+.++++.++
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 9 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNR-EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 578888888999999988888898877654221 01111 12244456666555544 44455555555443
No 107
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=37.10 E-value=11 Score=36.08 Aligned_cols=26 Identities=12% Similarity=0.241 Sum_probs=19.0
Q ss_pred CCCCCCCccCCCCc-----eeecC-CCCccee
Q 009957 84 AGPDSPEFYSLDEI-----VYRSR-SGGLLDV 109 (521)
Q Consensus 84 ~~~~cg~~~~~~~~-----~~~c~-cGGll~~ 109 (521)
.|..|++.|+.++. +-+|+ |||++.+
T Consensus 123 ~C~~C~~~~~~~~~~~~~~~p~C~~Cgg~lrP 154 (249)
T 1m2k_A 123 RCTSCNNSFEVESAPKIPPLPKCDKCGSLLRP 154 (249)
T ss_dssp EESSSSCEEECSSCCCSSSCCBCSSSSSBEEE
T ss_pred EeCCCCCcccchhhccCCCCCCCCCCCCCcCC
Confidence 58899998876442 34694 9998765
No 108
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=37.07 E-value=46 Score=31.63 Aligned_cols=68 Identities=10% Similarity=0.016 Sum_probs=42.9
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhH----HhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQL----VQPIANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~----~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
...+|+..+|--|.++|..-.+.|.+++++- .+ ..+. ..+...|.++..+..| .+++.+.++++.++.
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~-r~---~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILING-TD---PSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECC-SC---HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe-CC---HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 3567777778889999988888898766543 22 2222 2345567777666654 445556666655543
No 109
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=36.80 E-value=64 Score=30.08 Aligned_cols=68 Identities=15% Similarity=0.043 Sum_probs=41.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCH---Hh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISI---AQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~---~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-.. .. .+ ...+...|.++..+..| .++..+.++++.++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQ--QEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK 78 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGG--GHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--chHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 568888888899999987778898877664321 11 11 12344456666555544 44455555555444
No 110
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=36.76 E-value=62 Score=29.97 Aligned_cols=70 Identities=17% Similarity=0.182 Sum_probs=44.2
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHH-hHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIA-QLVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~-k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.++++..-.+..... ....+...|.++..+..| .+++.+.++++.++
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56777787888999998888899998876643311111 122355667777666554 44555566655544
No 111
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=36.45 E-value=1e+02 Score=29.40 Aligned_cols=54 Identities=19% Similarity=0.136 Sum_probs=36.0
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEEC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID 274 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~ 274 (521)
+.+|+..||..|.+++......|.+++++.-........+..+...|++++..|
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~D 66 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGE 66 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECC
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEec
Confidence 467888889999999987777899888876432112222333455687776544
No 112
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=36.07 E-value=1.3e+02 Score=27.61 Aligned_cols=68 Identities=10% Similarity=0.022 Sum_probs=40.1
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
...+|+..+|.-|.+++..-...|.+++++.-.. ....+.. ..+|.++..+..| .++..+.++++.++
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~--~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPN-SGGEAQA--KKLGNNCVFAPADVTSEKDVQTALALAKGK 83 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT-SSHHHHH--HHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc-HhHHHHH--HHhCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3578888889999999988788899877765332 1222221 2224444444443 44455555555443
No 113
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=36.03 E-value=1e+02 Score=28.68 Aligned_cols=68 Identities=13% Similarity=0.000 Sum_probs=37.7
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECC---CHHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT---DFDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g---~~dd~~~~~~~~~~~ 290 (521)
...+|+..+|--|.++|..-.+.|.+++++.-.. ....+. ....|.++..+.. +.+++.+.++++.++
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~--~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKP-PAGEEP--AAELGAAVRFRNADVTNEADATAALAFAKQE 78 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSC-C--------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh-HHHHHH--HHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3568888888889999988888899887765332 111111 1223544544443 345556666665544
No 114
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=35.61 E-value=1.1e+02 Score=28.39 Aligned_cols=69 Identities=10% Similarity=-0.010 Sum_probs=41.6
Q ss_pred eEEEEeCCch--HHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCC---CEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGD--TSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANG---AFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN--~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~G---A~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|. -|.++|..-.+.|.+++++.-.. ........+ ..++ +.++.+| .+.++..+.++++.++
T Consensus 9 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 9 NIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE-RLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch-HHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 5678887777 89999988888899887765332 122233333 2333 4445554 3345566666666554
No 115
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=35.61 E-value=69 Score=30.89 Aligned_cols=70 Identities=16% Similarity=0.112 Sum_probs=41.8
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCC-CEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANG-AFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~G-A~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-...|.+++++.-.......-...+...| .++..+..| .+++.+.++++.++
T Consensus 43 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 43 SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA 116 (293)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 56777777888999998888889987776533211111122344444 455555443 45556666666554
No 116
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=35.60 E-value=12 Score=27.44 Aligned_cols=15 Identities=13% Similarity=-0.013 Sum_probs=11.5
Q ss_pred eeecCCCCCCCCCCccCCC
Q 009957 77 AKYVPFNAGPDSPEFYSLD 95 (521)
Q Consensus 77 ~~~v~~~~~~~cg~~~~~~ 95 (521)
.+|+ |+.||..|+.+
T Consensus 2 ~~y~----C~~CGyvYd~~ 16 (55)
T 2v3b_B 2 RKWQ----CVVCGFIYDEA 16 (55)
T ss_dssp CEEE----ETTTCCEEETT
T ss_pred CcEE----eCCCCeEECCC
Confidence 3677 89999888753
No 117
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=35.39 E-value=56 Score=31.13 Aligned_cols=70 Identities=13% Similarity=0.132 Sum_probs=43.5
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCC-HHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKIS-IAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|-.-.+.|.+++++.-.+... ......+...|.++..+..| .+++.+.++++.++
T Consensus 31 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 31 VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 568888888889999988888899888775332111 11122345667777666554 34455555555444
No 118
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=35.38 E-value=83 Score=29.76 Aligned_cols=71 Identities=15% Similarity=0.038 Sum_probs=43.1
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCC---EEEEECCC---HHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGA---FVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA---~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
...+|+..+|--|.++|..-.+.|.+++++.-.......-...+...|. .+..+..| .+++.+.++++.++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3578888888889999988888899877764221000111223445554 66655544 44556666666554
No 119
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=35.38 E-value=1e+02 Score=29.04 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=43.9
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
...+|+..+|--|.++|..-.+.|.+++++.- +..++..+...++..+.+| .+.+++.+.++++.++
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLAR----RVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKI 84 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEES----CHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHH
Confidence 35788888888899999888889998877642 2334444333345555555 3455666666666554
No 120
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=35.07 E-value=53 Score=30.23 Aligned_cols=68 Identities=12% Similarity=0.036 Sum_probs=40.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCCH---HHHHHHHHHHHh
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTDF---DGCMKLIREVTS 289 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~~~ 289 (521)
+.+|+..+|.-|.+++..-...|.+++++.-.. ....+ ...+...|.++..+.+|. ++..+.++++.+
T Consensus 13 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 13 CAIITGAGAGIGKEIAITFATAGASVVVSDINA-DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 567888888899999988888898877654321 11111 223445566666565543 344444444433
No 121
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=34.90 E-value=12 Score=29.73 Aligned_cols=15 Identities=7% Similarity=-0.192 Sum_probs=11.2
Q ss_pred ceeecCCCCCCCCCCccCC
Q 009957 76 SAKYVPFNAGPDSPEFYSL 94 (521)
Q Consensus 76 ~~~~v~~~~~~~cg~~~~~ 94 (521)
+.+|+ |+.||..|+.
T Consensus 25 m~~y~----C~vCGyvYD~ 39 (81)
T 2kn9_A 25 YKLFR----CIQCGFEYDE 39 (81)
T ss_dssp CCEEE----ETTTCCEEET
T ss_pred cceEE----eCCCCEEEcC
Confidence 34677 8888888874
No 122
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=34.85 E-value=1.3e+02 Score=29.71 Aligned_cols=72 Identities=10% Similarity=0.024 Sum_probs=47.3
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcC-C------HHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKI-S------IAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTS 289 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~-s------~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 289 (521)
...+|+..+|--|.++|....+.|.+++++.-.... . ......+...|.++..+..| .+++.+.++++.+
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 125 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK 125 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 357888888888999998888889987776533210 0 11233456778887766654 4556666666655
Q ss_pred cC
Q 009957 290 EL 291 (521)
Q Consensus 290 ~~ 291 (521)
+.
T Consensus 126 ~~ 127 (346)
T 3kvo_A 126 KF 127 (346)
T ss_dssp HH
T ss_pred Hc
Confidence 53
No 123
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=34.22 E-value=1.2e+02 Score=27.94 Aligned_cols=66 Identities=15% Similarity=0.050 Sum_probs=42.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCCCEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANGAFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.+++..-.+.|.+++++.-. ..++..+ ...|+..+.+| .+.++..+.++++.++
T Consensus 7 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (245)
T 1uls_A 7 AVLITGAAHGIGRATLELFAKEGARLVACDIE----EGPLREAAEAVGAHPVVMDVADPASVERGFAEALAH 74 (245)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHH
Confidence 57888888999999998888889987776422 2333332 23476666665 3455555666655444
No 124
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=34.10 E-value=57 Score=30.77 Aligned_cols=70 Identities=13% Similarity=0.053 Sum_probs=42.8
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.++|....+.|.+++++.-.+.....+ ...+...|.++..+..| .++..+.++++.++
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 31 NVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 567777778889999988888899887766433111111 12345667666655544 44455555555443
No 125
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=34.03 E-value=1.2e+02 Score=25.28 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=35.1
Q ss_pred EEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEEC
Q 009957 222 GVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID 274 (521)
Q Consensus 222 ~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~ 274 (521)
.++++ .|..|..+|......|.+++++-.. +.+...+...|..++.-+
T Consensus 10 viIiG-~G~~G~~la~~L~~~g~~v~vid~~----~~~~~~~~~~g~~~i~gd 57 (140)
T 3fwz_A 10 ALLVG-YGRVGSLLGEKLLASDIPLVVIETS----RTRVDELRERGVRAVLGN 57 (140)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEEESC----HHHHHHHHHTTCEEEESC
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEECC----HHHHHHHHHcCCCEEECC
Confidence 34444 5999999999888999998887543 446666667888775443
No 126
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=33.92 E-value=15 Score=34.15 Aligned_cols=26 Identities=8% Similarity=-0.263 Sum_probs=20.8
Q ss_pred ceeecCCCCCCCCCCccCCCCceeecC-CCCc
Q 009957 76 SAKYVPFNAGPDSPEFYSLDEIVYRSR-SGGL 106 (521)
Q Consensus 76 ~~~~v~~~~~~~cg~~~~~~~~~~~c~-cGGl 106 (521)
..+|+ |+.||..|+- ...+.|+ ||.+
T Consensus 169 ~~~~~----C~~CG~i~~g-~~p~~CP~C~~~ 195 (202)
T 1yuz_A 169 DKFHL----CPICGYIHKG-EDFEKCPICFRP 195 (202)
T ss_dssp CCEEE----CSSSCCEEES-SCCSBCTTTCCB
T ss_pred CcEEE----ECCCCCEEcC-cCCCCCCCCCCC
Confidence 46888 9999999974 5668897 8865
No 127
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=33.85 E-value=2.7e+02 Score=25.99 Aligned_cols=31 Identities=13% Similarity=0.074 Sum_probs=22.9
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
...+|+..+|--|.++|..-.+.|.++++..
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~ 43 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTC 43 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEecCCchHHHHHHHHHHHCCCEEEEEe
Confidence 3567777777789999877777788766554
No 128
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=33.77 E-value=97 Score=29.15 Aligned_cols=67 Identities=15% Similarity=-0.002 Sum_probs=42.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhH----HhHHhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQL----VQPIANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~----~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|--|.++|..-.+.|.+++++.-. ..++ ..+...|.++..+..| .++..+.++++.++.
T Consensus 23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 23 TALVTGGSKGIGYAIVEELAGLGARVYTCSRN----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 57888888999999998888889887765422 2222 2244456666555544 445555666555543
No 129
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=33.69 E-value=78 Score=30.03 Aligned_cols=69 Identities=12% Similarity=0.041 Sum_probs=41.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++. .+.....+ ...+...|.++..+..| .++..+.++++.++
T Consensus 46 ~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 46 VALVTGAGRGIGREIAKMLAKSVSHVICIS-RTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp EEEEESTTSHHHHHHHHHHTTTSSEEEEEE-SSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHcCCEEEEEc-CCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 578888889999999988888898877743 22101111 12344557666655554 34445555555444
No 130
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=33.61 E-value=72 Score=29.54 Aligned_cols=70 Identities=14% Similarity=0.128 Sum_probs=42.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-.+.....+ ...+...|.++..+.+| .++..+.++++.++
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 567888888889999987778898877765312111111 12344567777666655 34455555555443
No 131
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=33.56 E-value=58 Score=30.31 Aligned_cols=70 Identities=13% Similarity=0.162 Sum_probs=42.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCCH---HHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTDF---DGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-.+.....+ ...+...|.++..+.+|. ++..+.++++.++
T Consensus 23 ~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 23 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 567888888899999988888898877765422111111 123455677776666553 3444555554443
No 132
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=33.38 E-value=75 Score=29.75 Aligned_cols=70 Identities=14% Similarity=0.135 Sum_probs=43.3
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCC-HHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKIS-IAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.++++..-.+... ......+...|.++..+..| .+++.+.++++.++
T Consensus 28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 567777878889999988888999987776554111 11223345566665555443 44555555555444
No 133
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=33.35 E-value=1e+02 Score=28.68 Aligned_cols=68 Identities=12% Similarity=0.038 Sum_probs=41.9
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCCCEEEEECC---CHHHHHHHHHHHHhcCC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANGAFVLSIDT---DFDGCMKLIREVTSELP 292 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g---~~dd~~~~~~~~~~~~~ 292 (521)
..+|+..+|--|.++|..-.+.|.+++++.-. ..+.... ..++..+..+.. +.+++.+.++++.++.+
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 10 SALITGSARGIGRAFAEAYVREGATVAIADID----IERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 57888888888999998888889987765422 2233222 233444444433 45556666666665543
No 134
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=33.26 E-value=90 Score=30.93 Aligned_cols=47 Identities=23% Similarity=0.015 Sum_probs=34.0
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEE
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVL 271 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 271 (521)
.+.+|.+ +|..|.+.+.+|+..|.+++++.. ++.++..++.+|++.+
T Consensus 191 ~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~----~~~~~~~~~~lGa~~v 237 (363)
T 3uog_A 191 DRVVVQG-TGGVALFGLQIAKATGAEVIVTSS----SREKLDRAFALGADHG 237 (363)
T ss_dssp CEEEEES-SBHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHTCSEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCEEEEEec----CchhHHHHHHcCCCEE
Confidence 3445555 788899999999999997766543 3457777778888654
No 135
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=33.22 E-value=1.1e+02 Score=28.89 Aligned_cols=67 Identities=21% Similarity=0.165 Sum_probs=41.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCH---HHHHHHHHHH
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDF---DGCMKLIREV 287 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~ 287 (521)
..+|+..+|--|.++|..-.+.|.++++..-.......-...+...|.++..+..|. ++..+.++++
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 35 TALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 567777778889999988888899877765332112222334556677776665543 3344444443
No 136
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=33.13 E-value=2.7e+02 Score=27.63 Aligned_cols=49 Identities=24% Similarity=0.357 Sum_probs=35.0
Q ss_pred EeCCchH--HHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHH
Q 009957 225 CASTGDT--SAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFD 278 (521)
Q Consensus 225 ~aSSGN~--g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~d 278 (521)
..|.|+. ..+||..-++.|.+|+|+.+.. -...+...|...+.++++.+
T Consensus 8 ~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~-----~~~~v~~~g~~~~~l~~~~~ 58 (404)
T 3h4t_A 8 CGSRGDTEPLVALAARLRELGADARMCLPPD-----YVERCAEVGVPMVPVGRAVR 58 (404)
T ss_dssp ESSHHHHHHHHHHHHHHHHTTCCEEEEECGG-----GHHHHHHTTCCEEECSSCSS
T ss_pred CCCCccHHHHHHHHHHHHHCCCeEEEEeCHH-----HHHHHHHcCCceeecCCCHH
Confidence 3566655 5677777788899999988753 12345678999998887754
No 137
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=33.03 E-value=62 Score=29.93 Aligned_cols=70 Identities=11% Similarity=0.174 Sum_probs=41.8
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..||--|.+++..-.+.|.+++++.-.+.....+ ..++...|.++..+..| .++..+.++++.++
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 6 VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567888888889999988888899887765422111111 12344456666555544 44455555555443
No 138
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=32.88 E-value=79 Score=31.09 Aligned_cols=46 Identities=11% Similarity=-0.066 Sum_probs=34.2
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEE
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFV 270 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~V 270 (521)
.+.+|.+.+|..|.+++..++..|.+++++ . ++.++..++.+|++.
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~----~~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIALARGARVFAT-A----RGSDLEYVRDLGATP 197 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-E----CHHHHHHHHHHTSEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEE-e----CHHHHHHHHHcCCCE
Confidence 345555557899999999999999986665 2 345677777889887
No 139
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=32.86 E-value=18 Score=27.91 Aligned_cols=27 Identities=22% Similarity=0.311 Sum_probs=20.1
Q ss_pred cceeecCCCCCCCCCCccCCC-CceeecC-CCC
Q 009957 75 FSAKYVPFNAGPDSPEFYSLD-EIVYRSR-SGG 105 (521)
Q Consensus 75 ~~~~~v~~~~~~~cg~~~~~~-~~~~~c~-cGG 105 (521)
..+.|+ |..||.+++.. ....+|+ ||.
T Consensus 25 ~~v~Y~----C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 25 ATLKYI----CAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CCCCEE----CSSSCCEECCCTTSTTCCSSSCC
T ss_pred ceEEEE----CCCCCCcceeCCCCCccCCCCCc
Confidence 358898 99999997764 2234795 997
No 140
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=32.81 E-value=67 Score=29.92 Aligned_cols=69 Identities=16% Similarity=0.109 Sum_probs=40.9
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-.. ....+ ...+...|.++..+..| .++..+.++++.++
T Consensus 16 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 16 VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQ-ENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL 88 (260)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 568888888889999988888898877654221 01111 12344556666555443 44455555554443
No 141
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=32.81 E-value=25 Score=26.64 Aligned_cols=27 Identities=19% Similarity=0.123 Sum_probs=21.1
Q ss_pred CCCCCCCCccCCCCceeecCCCCcceecc
Q 009957 83 NAGPDSPEFYSLDEIVYRSRSGGLLDVQH 111 (521)
Q Consensus 83 ~~~~~cg~~~~~~~~~~~c~cGGll~~~~ 111 (521)
+.|..|++.+.+- .+.|+||+.|=-.+
T Consensus 16 ~rC~~C~kkvgl~--~f~CrCg~~FC~~H 42 (64)
T 1wfh_A 16 NRCTVCRKRVGLT--GFMCRCGTTFCGSH 42 (64)
T ss_dssp CCCTTTCCCCCTT--CEECSSSCEECTTT
T ss_pred CcChhhCCccCcc--CEEeecCCEecccc
Confidence 4688999988763 68899999886544
No 142
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=32.76 E-value=76 Score=31.17 Aligned_cols=48 Identities=15% Similarity=0.060 Sum_probs=33.7
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEE
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVL 271 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 271 (521)
.+.+|.+.+|..|.+++..++..|.+++++... +.++..++.+|++.+
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~----~~~~~~~~~~ga~~v 208 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR----TAATEFVKSVGADIV 208 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS----GGGHHHHHHHTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHhcCCcEE
Confidence 344555666899999999999999987766543 235566666787654
No 143
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=32.53 E-value=16 Score=28.26 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=11.8
Q ss_pred eeecCCCCCCCCCCccCCC
Q 009957 77 AKYVPFNAGPDSPEFYSLD 95 (521)
Q Consensus 77 ~~~v~~~~~~~cg~~~~~~ 95 (521)
.+|+ |+.||..|+.+
T Consensus 6 ~~y~----C~vCGyiYd~~ 20 (70)
T 1dx8_A 6 GKYE----CEACGYIYEPE 20 (70)
T ss_dssp SCEE----ETTTCCEECTT
T ss_pred ceEE----eCCCCEEEcCC
Confidence 3687 99999999853
No 144
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=32.52 E-value=1.3e+02 Score=30.89 Aligned_cols=47 Identities=15% Similarity=0.108 Sum_probs=35.8
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEE
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVL 271 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 271 (521)
+.+|.+.+|-.|.+...+++..|.+++++.. ++.|+..++.+|++.+
T Consensus 231 ~VlV~GasG~vG~~avqlak~~Ga~vi~~~~----~~~~~~~~~~lGa~~v 277 (456)
T 3krt_A 231 NVLIWGASGGLGSYATQFALAGGANPICVVS----SPQKAEICRAMGAEAI 277 (456)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHTCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCeEEEEEC----CHHHHHHHHhhCCcEE
Confidence 4445455688899999999999998877763 4567788888999765
No 145
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=32.39 E-value=1.7e+02 Score=27.43 Aligned_cols=71 Identities=13% Similarity=0.050 Sum_probs=44.9
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcC------CHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKI------SIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTS 289 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~------s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 289 (521)
...+|+..+|--|.++|..-.+.|.+++++.-.... ...+ ...+...|.++..+..| .+++.+.++++.+
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 86 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD 86 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 357888888888999998888889987776533210 0111 22244567777666654 4556666666655
Q ss_pred c
Q 009957 290 E 290 (521)
Q Consensus 290 ~ 290 (521)
+
T Consensus 87 ~ 87 (274)
T 3e03_A 87 T 87 (274)
T ss_dssp H
T ss_pred H
Confidence 4
No 146
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.22 E-value=85 Score=29.53 Aligned_cols=71 Identities=14% Similarity=0.122 Sum_probs=42.9
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcC--------CHHhHH----hHHhCCCEEEEECCC---HHHHHHHH
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKI--------SIAQLV----QPIANGAFVLSIDTD---FDGCMKLI 284 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~--------s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~ 284 (521)
...+|+..+|--|.++|..-.+.|.+++++--.... +..++. .+...|.++..+..| .+++.+.+
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 90 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL 90 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 357888888888999998888889988776422100 122222 234567666666544 44455555
Q ss_pred HHHHhc
Q 009957 285 REVTSE 290 (521)
Q Consensus 285 ~~~~~~ 290 (521)
+++.++
T Consensus 91 ~~~~~~ 96 (287)
T 3pxx_A 91 ANAVAE 96 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 147
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=32.18 E-value=1.8e+02 Score=26.81 Aligned_cols=68 Identities=15% Similarity=0.046 Sum_probs=42.3
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-. ....-...+...|.++..+..| .++..+.++++.++
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (249)
T 2ew8_A 9 LAVITGGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST 79 (249)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS--CCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCC--chhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 57888888999999998888889887765422 1111112445567666555544 44455555555443
No 148
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=32.07 E-value=17 Score=26.62 Aligned_cols=15 Identities=20% Similarity=0.253 Sum_probs=11.5
Q ss_pred eeecCCCCCCCCCCccCCC
Q 009957 77 AKYVPFNAGPDSPEFYSLD 95 (521)
Q Consensus 77 ~~~v~~~~~~~cg~~~~~~ 95 (521)
.+|+ |+.||..|+.+
T Consensus 2 ~~y~----C~vCGyvYd~~ 16 (54)
T 4rxn_A 2 KKYT----CTVCGYIYDPE 16 (54)
T ss_dssp CCEE----ETTTCCEECTT
T ss_pred CceE----CCCCCeEECCC
Confidence 4677 88999888753
No 149
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=31.96 E-value=70 Score=30.16 Aligned_cols=66 Identities=15% Similarity=0.200 Sum_probs=40.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHH----hH-HhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLV----QP-IANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~-~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-. ..++. .+ ...|.++..+..| .++..+.++++.++
T Consensus 23 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 23 VALVTGGSRGLGFGIAQGLAEAGCSVVVASRN----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57888888899999998888889887765432 12222 12 3346666555544 44455555555443
No 150
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=31.94 E-value=1.1e+02 Score=28.74 Aligned_cols=68 Identities=12% Similarity=0.185 Sum_probs=39.9
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCC--CEEEEECCC---HHHHHHHHHHHHh
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANG--AFVLSIDTD---FDGCMKLIREVTS 289 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~G--A~Vi~v~g~---~dd~~~~~~~~~~ 289 (521)
..+|+..+|.-|.+++......|.+++++.-.. ....+ ...+...| ..+..+.+| .++..+.++++.+
T Consensus 34 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 34 LALVTGASGGIGAAVARALVQQGLKVVGCARTV-GNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCh-HHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 578888889999999988888898877764321 01111 12233444 456555544 3444445544443
No 151
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=31.76 E-value=85 Score=29.77 Aligned_cols=56 Identities=13% Similarity=0.023 Sum_probs=37.8
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD 276 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~ 276 (521)
...+|+..+|--|.++|..-.+.|.+++++. ...........+...|.++..+..|
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~D 87 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWG-RTDGVKEVADEIADGGGSAEAVVAD 87 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-SSTHHHHHHHHHHTTTCEEEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc-CHHHHHHHHHHHHhcCCcEEEEEec
Confidence 3578888888889999988888999888776 3211112223355677777666654
No 152
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=31.68 E-value=1.1e+02 Score=28.35 Aligned_cols=68 Identities=12% Similarity=0.021 Sum_probs=40.5
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCC-EEEEccCCcCCHHhHHhHHhC--CCEEEEECCCH----HHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIP-SIVFLPANKISIAQLVQPIAN--GAFVLSIDTDF----DGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~-~~V~vP~~~~s~~k~~q~~~~--GA~Vi~v~g~~----dd~~~~~~~~~~~ 290 (521)
+.+|+..+|--|.+++....+.|.+ ++++. .+ .....+..+... |..+..+..|. +++.+.++++.++
T Consensus 7 ~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~-r~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 7 NVIFVAALGGIGLDTSRELVKRNLKNFVILD-RV-ENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTCCSEEEEEE-SS-CCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCcEEEEEe-cC-chHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 5678888888899999888888998 55443 32 122333333322 55665555443 4455555555444
No 153
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=31.68 E-value=94 Score=28.92 Aligned_cols=68 Identities=16% Similarity=0.050 Sum_probs=40.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh----HHhC--CCEEEEECC---CHHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ----PIAN--GAFVLSIDT---DFDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q----~~~~--GA~Vi~v~g---~~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-. ..+... +... |.++..+.. +.++..+.++++.++.
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 9 LAVVTAGSSGLGFASALELARNGARLLLFSRN----REKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 57888888999999998878889887765422 222221 2221 324444443 3455556666665554
Q ss_pred C
Q 009957 292 P 292 (521)
Q Consensus 292 ~ 292 (521)
+
T Consensus 85 g 85 (260)
T 2z1n_A 85 G 85 (260)
T ss_dssp C
T ss_pred C
Confidence 4
No 154
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=31.67 E-value=88 Score=30.01 Aligned_cols=71 Identities=15% Similarity=0.139 Sum_probs=44.7
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCc--------CCHHhHH----hHHhCCCEEEEECCC---HHHHHHHH
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANK--------ISIAQLV----QPIANGAFVLSIDTD---FDGCMKLI 284 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~--------~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~ 284 (521)
...+|+..+|.-|.++|..-.+.|.+++++--... -+..++. ++...|.++..+..| .+++.+.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 108 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAV 108 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence 35788888888899999888888999887642200 0122322 345667777666544 45556666
Q ss_pred HHHHhc
Q 009957 285 REVTSE 290 (521)
Q Consensus 285 ~~~~~~ 290 (521)
+++.++
T Consensus 109 ~~~~~~ 114 (299)
T 3t7c_A 109 DDGVTQ 114 (299)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665554
No 155
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=31.64 E-value=28 Score=26.37 Aligned_cols=27 Identities=11% Similarity=0.100 Sum_probs=21.0
Q ss_pred CCCCCCCCccCCCCceeecCCCCcceecc
Q 009957 83 NAGPDSPEFYSLDEIVYRSRSGGLLDVQH 111 (521)
Q Consensus 83 ~~~~~cg~~~~~~~~~~~c~cGGll~~~~ 111 (521)
+.|..|++.+.+- .+.|.||+.|=-.+
T Consensus 16 ~rC~~C~kkvgl~--~f~CrCg~~FC~~H 42 (64)
T 1wg2_A 16 NRCFSCNKKVGVM--GFKCKCGSTFCGSH 42 (64)
T ss_dssp CSCTTTCCCCTTS--CEECTTSCEECSSS
T ss_pred CcChhhCCccccc--CeEeecCCEecccC
Confidence 3688999988753 68899999886544
No 156
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=31.53 E-value=59 Score=30.08 Aligned_cols=30 Identities=7% Similarity=-0.065 Sum_probs=23.2
Q ss_pred eEEEEeCCchHHHHHHHHHHh-cCCCEEEEc
Q 009957 221 VGVGCASTGDTSAALSAYCAS-AGIPSIVFL 250 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~-~Gi~~~V~v 250 (521)
+.+|+..+|--|.+++..-.. .|.+++++.
T Consensus 6 ~vlITGasggIG~~~a~~L~~~~g~~V~~~~ 36 (276)
T 1wma_A 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTA 36 (276)
T ss_dssp EEEESSCSSHHHHHHHHHHHHHSSSEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHhcCCeEEEEe
Confidence 567888888889999976666 888776654
No 157
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=31.42 E-value=1.2e+02 Score=28.67 Aligned_cols=69 Identities=12% Similarity=-0.026 Sum_probs=43.3
Q ss_pred eEEEEeCCch--HHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhC--CCEEEEEC-CCHHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGD--TSAALSAYCASAGIPSIVFLPANKISIAQLVQPIAN--GAFVLSID-TDFDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN--~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~--GA~Vi~v~-g~~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|+ -|.++|..-.+.|.+++++.-.. ....+..+... .+.++.+| .+.++..+.++++.++.
T Consensus 28 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 28 KILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp EEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 5677776666 89999988888899877665442 33445555433 34555555 34556666676666553
No 158
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.31 E-value=66 Score=30.21 Aligned_cols=69 Identities=20% Similarity=0.164 Sum_probs=41.0
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCC-CEEEEECC---CHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANG-AFVLSIDT---DFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~G-A~Vi~v~g---~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++.-.. ....+ ...+...| .++..+.. +.+++.+.++++.++
T Consensus 12 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 12 SVVVTGGTKGIGRGIATVFARAGANVAVAGRST-ADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567777778889999988888899877664221 11111 12244444 45554544 345566666666554
No 159
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=31.31 E-value=90 Score=29.44 Aligned_cols=71 Identities=11% Similarity=0.059 Sum_probs=44.7
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCc--------CCHHhHH----hHHhCCCEEEEECCC---HHHHHHHH
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANK--------ISIAQLV----QPIANGAFVLSIDTD---FDGCMKLI 284 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~--------~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~ 284 (521)
...+|+..+|--|.++|..-.+.|.+++++.-... .+..++. .+...|.++..+..| .+++.+.+
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 35788888888899999888889999777653210 0122222 244567777666544 45566666
Q ss_pred HHHHhc
Q 009957 285 REVTSE 290 (521)
Q Consensus 285 ~~~~~~ 290 (521)
+++.++
T Consensus 91 ~~~~~~ 96 (281)
T 3s55_A 91 AEAEDT 96 (281)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 665544
No 160
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=31.28 E-value=54 Score=30.88 Aligned_cols=70 Identities=20% Similarity=0.275 Sum_probs=40.5
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECC---CHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDT---DFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g---~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.++|..-.+.|.++++..-.......+ ...+...|.++..+.. +.+++.+.++++.++
T Consensus 27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 467777778889999988888999887765332111111 1223445555544443 344455555555443
No 161
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=31.26 E-value=79 Score=28.82 Aligned_cols=70 Identities=14% Similarity=0.129 Sum_probs=42.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCCH---HHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTDF---DGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.+++..-.+.|.+++++.-.+.....+ ..++...|.++..+.+|. ++..+.++++.++
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 467778888889999988888999888754433111111 122444576776666553 3445555555444
No 162
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=31.15 E-value=2.1e+02 Score=26.74 Aligned_cols=70 Identities=11% Similarity=0.141 Sum_probs=42.9
Q ss_pred eEEEEeCC--chHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHh-CC-CEEEEEC-CCHHHHHHHHHHHHhcC
Q 009957 221 VGVGCAST--GDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIA-NG-AFVLSID-TDFDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSS--GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~-~G-A~Vi~v~-g~~dd~~~~~~~~~~~~ 291 (521)
..+|+..+ |--|.++|....+.|.+++++.-... ....+..+.. .| +.++.+| .+.++..+.++++.++.
T Consensus 8 ~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 8 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56777766 78899999888888998777654321 2223334432 34 4455555 34555666666665554
No 163
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=31.12 E-value=3.4e+02 Score=27.82 Aligned_cols=99 Identities=14% Similarity=0.053 Sum_probs=55.8
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhc-CCCceEEEEeCCchHHHHHHHHHHh-cCCCEEEEccCCcCCH-----------H
Q 009957 192 ISHTGSFKDLGMTVLVSQVNRLRKM-KRPVVGVGCASTGDTSAALSAYCAS-AGIPSIVFLPANKISI-----------A 258 (521)
Q Consensus 192 ~nPTGSfKDRga~~~v~~a~~~~~~-g~~~~~Vv~aSSGN~g~AlAa~aa~-~Gi~~~V~vP~~~~s~-----------~ 258 (521)
-+|.|.-+..-- .+.+.+..... ..+...+|+..|+.-|.|+|...+. .|-+++++.-...... .
T Consensus 21 ~hp~gc~~~v~~--qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~ 98 (405)
T 3zu3_A 21 AHPTGCEANVKK--QIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSA 98 (405)
T ss_dssp CCHHHHHHHHHH--HHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHH
T ss_pred CCCHHHHHHHHH--HHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHH
Confidence 367776554222 23333322111 1234568888888889999977777 8998877642211111 0
Q ss_pred h-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhcCC
Q 009957 259 Q-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSELP 292 (521)
Q Consensus 259 k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~~ 292 (521)
. ...+...|..++.+.+| .+++.+.++++.++.|
T Consensus 99 ~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~G 136 (405)
T 3zu3_A 99 AFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLG 136 (405)
T ss_dssp HHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 1 12345678777666554 4556677777766654
No 164
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=30.96 E-value=88 Score=29.63 Aligned_cols=30 Identities=7% Similarity=0.087 Sum_probs=24.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
..+|+..+|.-|.+++....+.|.+++++.
T Consensus 31 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~ 60 (276)
T 2b4q_A 31 IALVTGGSRGIGQMIAQGLLEAGARVFICA 60 (276)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 578888889999999988888898876653
No 165
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=30.94 E-value=83 Score=29.23 Aligned_cols=72 Identities=10% Similarity=0.040 Sum_probs=44.4
Q ss_pred ceEEEEeCC--chHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHH-hCC-CEEEEEC-CCHHHHHHHHHHHHhcCC
Q 009957 220 VVGVGCAST--GDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPI-ANG-AFVLSID-TDFDGCMKLIREVTSELP 292 (521)
Q Consensus 220 ~~~Vv~aSS--GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~-~~G-A~Vi~v~-g~~dd~~~~~~~~~~~~~ 292 (521)
.+.+|+..+ |.-|.++|..-.+.|.+++++.-.. ....++..+. .+| +.++.+| .+.+++.+.++++.++.+
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 91 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD 91 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch-hhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356777755 7789999988888899887765432 2333444442 333 4445555 345566677777666543
No 166
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=30.71 E-value=46 Score=29.49 Aligned_cols=25 Identities=20% Similarity=0.158 Sum_probs=22.3
Q ss_pred eCCchHHHHHHHHHHhcCCCEEEEc
Q 009957 226 ASTGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 226 aSSGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
--+|=+|.++|.+.++.|++|+||=
T Consensus 8 IGaGpaGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 8 IGTGIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred ECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 3559999999999999999999985
No 167
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=30.52 E-value=1.7e+02 Score=26.79 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=41.7
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhH-HhCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQP-IANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~-~~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
...+|+..+|.-|.+++..-.+.|.+++++.-.. ....+ +..+ ..+|.++..+..| .++..+.++++.++.
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSA-ADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC-TTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcc-hhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 3578888889999999988888898877765322 12111 2222 2235555445444 444555555554443
No 168
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=30.49 E-value=82 Score=29.54 Aligned_cols=68 Identities=13% Similarity=0.094 Sum_probs=40.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHH-hHHhCCCEEEEECCC---HHHHHHHHHHHHh
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLV-QPIANGAFVLSIDTD---FDGCMKLIREVTS 289 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~-q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~ 289 (521)
..+|+..+|.-|.+++..-...|.+++++.-.. ....+.. .+..+|.++..+..| .++..+.++++.+
T Consensus 36 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 36 VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSH-PADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp EEEETTTTSSHHHHHHHHHHHHTCEEEEEESSS-CCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence 567888888899999977777898877765332 1222222 233446666555544 3444455554433
No 169
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=30.33 E-value=99 Score=28.62 Aligned_cols=66 Identities=11% Similarity=0.058 Sum_probs=40.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCCCEEEEECC---CHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANGAFVLSIDT---DFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g---~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.++|....+.|.+++++- .+ ..++..+ ..++.++..+.. +.+++.+.++++.++
T Consensus 11 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~-r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 11 VALITGAGSGFGEGMAKRFAKGGAKVVIVD-RD---KAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE-SC---HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEc-CC---HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 578888888889999988888898876653 22 2233332 233544544443 345556666665544
No 170
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=30.28 E-value=1.6e+02 Score=28.02 Aligned_cols=83 Identities=13% Similarity=-0.028 Sum_probs=49.7
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC-c--cccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP-I--YLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~-~--~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
|+.++.-.. .+-..-...+...|++|+.++-+.+...+.++++.+..+ . +..+-.++ +..+.+.-++.++++
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~---~~v~~~~~~~~~~~G- 85 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDE---LAIEAAFSKLDAEGI- 85 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH---HHHHHHHHHHHHTTC-
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCH---HHHHHHHHHHHHHCC-
Confidence 455555433 122223344667899999998887777777777655432 1 12222233 334455667777777
Q ss_pred CCCcEEEEcCCc
Q 009957 321 EVPDWVIVPGGN 332 (521)
Q Consensus 321 ~~pD~VvVP~G~ 332 (521)
.+|.+|--.|.
T Consensus 86 -~iDiLVNNAG~ 96 (255)
T 4g81_D 86 -HVDILINNAGI 96 (255)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCcEEEECCCC
Confidence 78988877653
No 171
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=30.03 E-value=20 Score=32.36 Aligned_cols=26 Identities=19% Similarity=0.084 Sum_probs=19.6
Q ss_pred ceeecCCCCCCCCCCccCCCCceeecC-CCCc
Q 009957 76 SAKYVPFNAGPDSPEFYSLDEIVYRSR-SGGL 106 (521)
Q Consensus 76 ~~~~v~~~~~~~cg~~~~~~~~~~~c~-cGGl 106 (521)
..+|+ |+.||..|. .+..-.|| ||.+
T Consensus 136 ~~~~~----C~~CG~i~~-~~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 136 KKVYI----CPICGYTAV-DEAPEYCPVCGAP 162 (170)
T ss_dssp SCEEE----CTTTCCEEE-SCCCSBCTTTCCB
T ss_pred CCeeE----eCCCCCeeC-CCCCCCCCCCCCC
Confidence 36788 999999998 44555796 8864
No 172
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=29.80 E-value=2.7e+02 Score=24.03 Aligned_cols=46 Identities=15% Similarity=-0.013 Sum_probs=33.0
Q ss_pred EEEEeCCchHHHHHHHHHHhc-CCCEEEEccCCcCCHHhHHhHHhCCCEEEE
Q 009957 222 GVGCASTGDTSAALSAYCASA-GIPSIVFLPANKISIAQLVQPIANGAFVLS 272 (521)
Q Consensus 222 ~Vv~aSSGN~g~AlAa~aa~~-Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~ 272 (521)
.++++ .|..|..++...... |.+++++-. ++.+...+...|+.++.
T Consensus 42 v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~----~~~~~~~~~~~g~~~~~ 88 (183)
T 3c85_A 42 VLILG-MGRIGTGAYDELRARYGKISLGIEI----REEAAQQHRSEGRNVIS 88 (183)
T ss_dssp EEEEC-CSHHHHHHHHHHHHHHCSCEEEEES----CHHHHHHHHHTTCCEEE
T ss_pred EEEEC-CCHHHHHHHHHHHhccCCeEEEEEC----CHHHHHHHHHCCCCEEE
Confidence 45555 599999999888888 999887743 34456666667876653
No 173
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=29.77 E-value=83 Score=29.61 Aligned_cols=71 Identities=13% Similarity=0.066 Sum_probs=43.1
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCc--------CCHHhHH----hHHhCCCEEEEECCC---HHHHHHHH
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANK--------ISIAQLV----QPIANGAFVLSIDTD---FDGCMKLI 284 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~--------~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~ 284 (521)
...+|+..+|--|.++|..-.+.|.+++++--... .+..++. .+...|.++..+..| .+++.+.+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 93 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAAL 93 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 35788888888899999888889999877642210 0122222 234456666655544 44455555
Q ss_pred HHHHhc
Q 009957 285 REVTSE 290 (521)
Q Consensus 285 ~~~~~~ 290 (521)
+++.++
T Consensus 94 ~~~~~~ 99 (278)
T 3sx2_A 94 QAGLDE 99 (278)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 174
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=29.65 E-value=56 Score=31.26 Aligned_cols=66 Identities=14% Similarity=0.098 Sum_probs=41.8
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHH----hHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLV----QPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++. .+ ..++. .+...|.++..+..| .++..+.++++.++
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~-r~---~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 10 IAIVTGASSGIGRAAALLFAREGAKVVVTA-RN---GNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEECC-SC---HHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEE-CC---HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 567777778889999988888898866543 22 22322 234457777766654 44555666655544
No 175
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=29.63 E-value=1.6e+02 Score=31.71 Aligned_cols=69 Identities=13% Similarity=0.092 Sum_probs=48.0
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCH-HHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDF-DGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~-dd~~~~~~~~~~~~ 291 (521)
..||+..++--|.++|...++.|.++++.--.. ...-...+...|.+++.+..|. ++..+.++++.++.
T Consensus 324 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 324 VVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKY 393 (604)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred eEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhc
Confidence 467777777779999988888999877753221 2223345666788888888888 77766666665553
No 176
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=29.58 E-value=1.3e+02 Score=27.37 Aligned_cols=66 Identities=17% Similarity=0.131 Sum_probs=39.8
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCC-------CEEEEccCCcCCHHhHH----hHHhCCCEEEEECCCH---HHHHHHHHH
Q 009957 221 VGVGCASTGDTSAALSAYCASAGI-------PSIVFLPANKISIAQLV----QPIANGAFVLSIDTDF---DGCMKLIRE 286 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi-------~~~V~vP~~~~s~~k~~----q~~~~GA~Vi~v~g~~---dd~~~~~~~ 286 (521)
..+|+..+|--|.+++....+.|. +++++. .+ ..+.. .+...|.++..+.+|. ++..+.+++
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~-r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSS-RT---AADLEKISLECRAEGALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEE-SC---HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEe-CC---HHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence 568888888899999977777787 555543 22 22222 2344577776666553 344455555
Q ss_pred HHhc
Q 009957 287 VTSE 290 (521)
Q Consensus 287 ~~~~ 290 (521)
+.++
T Consensus 80 ~~~~ 83 (244)
T 2bd0_A 80 IVER 83 (244)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5444
No 177
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=29.57 E-value=98 Score=30.11 Aligned_cols=48 Identities=19% Similarity=0.096 Sum_probs=34.4
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEE
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVL 271 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 271 (521)
.+.++.+.+|..|.+++..++..|.+++++.. ++.++..++.+|++.+
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~----~~~~~~~~~~~ga~~~ 197 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS----TDEKLKIAKEYGAEYL 197 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHcCCcEE
Confidence 34455454788999999999999997666543 3457777778887654
No 178
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=29.48 E-value=97 Score=28.52 Aligned_cols=66 Identities=11% Similarity=-0.009 Sum_probs=39.0
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHH---hCCCEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPI---ANGAFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~---~~GA~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++.-. ..++..+. ..++..+.+| .+.++..+.++++.++
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 74 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRR----YQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEW 74 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence 56888888888999998888889887665322 22322221 1134444444 2345555566555444
No 179
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=29.47 E-value=97 Score=29.37 Aligned_cols=67 Identities=16% Similarity=0.136 Sum_probs=41.1
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHH----hHHh-CCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLV----QPIA-NGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~-~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-. ..+.. .+.. +|.++..+.+| .++..+.++++.++.
T Consensus 28 ~vlITGasggiG~~la~~L~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 28 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRK----MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 57888888999999998888889887765432 12222 1222 26555555544 445555666555443
No 180
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=29.29 E-value=2.9e+02 Score=24.86 Aligned_cols=30 Identities=13% Similarity=0.069 Sum_probs=25.2
Q ss_pred eEEEEeCCchHHHHHHHHHHhcC-CCEEEEc
Q 009957 221 VGVGCASTGDTSAALSAYCASAG-IPSIVFL 250 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~G-i~~~V~v 250 (521)
+.+|+..+|..|.+++......| .+++++.
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~ 55 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFA 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEE
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEE
Confidence 56888888999999998888888 7777765
No 181
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=28.96 E-value=96 Score=30.88 Aligned_cols=47 Identities=15% Similarity=0.015 Sum_probs=34.4
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEE
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVL 271 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 271 (521)
.+.+|.+.+|..|.+...+|+..|.++++.. ++.++..++.+|++.+
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-----~~~~~~~~~~lGa~~v 212 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSGYIPIATC-----SPHNFDLAKSRGAEEV 212 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-----CGGGHHHHHHTTCSEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-----CHHHHHHHHHcCCcEE
Confidence 3445556668899999999999999876653 2346777888998654
No 182
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=28.89 E-value=1.1e+02 Score=28.94 Aligned_cols=71 Identities=14% Similarity=0.006 Sum_probs=42.8
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCC---------cCCHHhHH----hHHhCCCEEEEECCC---HHHHHHH
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPAN---------KISIAQLV----QPIANGAFVLSIDTD---FDGCMKL 283 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~---------~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~ 283 (521)
...+|+..+|--|.++|..-.+.|.+++++--.. ..+..++. .+...|.++..+..| .+++.+.
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 95 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL 95 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 3578888888889999988888899988764210 00222322 234556666555443 4445555
Q ss_pred HHHHHhc
Q 009957 284 IREVTSE 290 (521)
Q Consensus 284 ~~~~~~~ 290 (521)
++++.++
T Consensus 96 ~~~~~~~ 102 (280)
T 3pgx_A 96 VADGMEQ 102 (280)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555444
No 183
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=28.85 E-value=1.5e+02 Score=29.27 Aligned_cols=46 Identities=11% Similarity=0.029 Sum_probs=34.7
Q ss_pred chHHHHHHHHHHhc-CCCEEEEccCCc-CCHHhHHhHHhCCCEEEEEC
Q 009957 229 GDTSAALSAYCASA-GIPSIVFLPANK-ISIAQLVQPIANGAFVLSID 274 (521)
Q Consensus 229 GN~g~AlAa~aa~~-Gi~~~V~vP~~~-~s~~k~~q~~~~GA~Vi~v~ 274 (521)
||.+.|+...+++. |+++++..|++- +++.-+..+...|+++...+
T Consensus 163 ~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 210 (306)
T 4ekn_B 163 GRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 210 (306)
T ss_dssp CHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred CcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence 68999999999999 999999999873 33333344566788876554
No 184
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=28.83 E-value=1e+02 Score=29.06 Aligned_cols=71 Identities=10% Similarity=0.095 Sum_probs=44.3
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCC------------cCCHHhHHh----HHhCCCEEEEECCC---HHHH
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPAN------------KISIAQLVQ----PIANGAFVLSIDTD---FDGC 280 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~------------~~s~~k~~q----~~~~GA~Vi~v~g~---~dd~ 280 (521)
...+|+..+|--|.++|..-.+.|.+++++--.. .-+..++.. +...|.++..+..| .++.
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 91 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDAL 91 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHH
Confidence 3578888888889999988888999987763210 011233322 34567666655543 4556
Q ss_pred HHHHHHHHhc
Q 009957 281 MKLIREVTSE 290 (521)
Q Consensus 281 ~~~~~~~~~~ 290 (521)
.+.++++.++
T Consensus 92 ~~~~~~~~~~ 101 (286)
T 3uve_A 92 KAAVDSGVEQ 101 (286)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666665554
No 185
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=28.60 E-value=31 Score=26.91 Aligned_cols=27 Identities=11% Similarity=0.137 Sum_probs=21.5
Q ss_pred CCCCCCCCccCCCCceeecCCCCcceecc
Q 009957 83 NAGPDSPEFYSLDEIVYRSRSGGLLDVQH 111 (521)
Q Consensus 83 ~~~~~cg~~~~~~~~~~~c~cGGll~~~~ 111 (521)
+.|..|++.+.+- .+.|.||+.|=-.+
T Consensus 26 ~RC~~C~kkvgL~--~f~CrCg~~FCs~H 52 (74)
T 1wfp_A 26 TRCLSCNKKVGVT--GFKCRCGSTFCGTH 52 (74)
T ss_dssp CBCSSSCCBCTTT--CEECTTSCEECTTT
T ss_pred ccchhhcCccccc--ceEeccCCEecccc
Confidence 3688999998864 68899999986554
No 186
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=28.57 E-value=81 Score=29.29 Aligned_cols=66 Identities=14% Similarity=0.117 Sum_probs=38.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCC--CEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANG--AFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~G--A~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++.-. ..+...+ ...+ +..+.+| .+.+++.+.++++.++
T Consensus 11 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 11 VALVTGASRGIGKAIAELLAERGAKVIGTATS----ESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHH
Confidence 56777777888999998888889987765422 2222222 1122 3344444 3445555666655544
No 187
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=28.30 E-value=93 Score=28.97 Aligned_cols=66 Identities=21% Similarity=0.261 Sum_probs=40.0
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh----HHhC-CCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ----PIAN-GAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q----~~~~-GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-. ..+... +... |.++..+..| .++..+.++++.++
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 9 VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ----VDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCC----HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56888888999999998888889887765422 222222 2222 6555555544 44455555555443
No 188
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=28.29 E-value=1.2e+02 Score=28.03 Aligned_cols=31 Identities=13% Similarity=0.160 Sum_probs=24.6
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
...+|+..+|--|.++|..-.+.|.+++++.
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~ 38 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIA 38 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 3578888888889999987778898876653
No 189
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=28.26 E-value=1.3e+02 Score=27.88 Aligned_cols=68 Identities=12% Similarity=0.112 Sum_probs=41.1
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh----HHhC---CCEEEEEC---CCHHHHHHHHHHHHh
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ----PIAN---GAFVLSID---TDFDGCMKLIREVTS 289 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q----~~~~---GA~Vi~v~---g~~dd~~~~~~~~~~ 289 (521)
...+|+..+|--|.++|..-.+.|.+++++.-. ..++.. +... .+..+.++ .+.+++.+.++++.+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRN----EEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 356888888888999998778889987765422 222222 2221 34555555 344556666666655
Q ss_pred cC
Q 009957 290 EL 291 (521)
Q Consensus 290 ~~ 291 (521)
+.
T Consensus 89 ~~ 90 (252)
T 3f1l_A 89 NY 90 (252)
T ss_dssp HC
T ss_pred hC
Confidence 43
No 190
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=28.23 E-value=88 Score=29.25 Aligned_cols=66 Identities=15% Similarity=0.028 Sum_probs=40.1
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHH----hHHhC--CCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLV----QPIAN--GAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~--GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.++|..-.+.|.+++++.-. ..+.. .+... |.++..+..| .++..+.++++.++
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 15 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVS----SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 57888888999999998888889887775422 22222 22222 5555555444 44455555555444
No 191
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=28.22 E-value=1.4e+02 Score=28.89 Aligned_cols=47 Identities=11% Similarity=-0.022 Sum_probs=33.2
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEE
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFV 270 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~V 270 (521)
...++.+.+|..|.+++..++..|.+++++.. ++.++..++.+|+..
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~----~~~~~~~~~~~g~~~ 193 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG----SDEKIAYLKQIGFDA 193 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHTTCSE
T ss_pred CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHhcCCcE
Confidence 45677777799999999999999987665533 344555556677643
No 192
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=27.93 E-value=1.3e+02 Score=28.86 Aligned_cols=69 Identities=14% Similarity=0.083 Sum_probs=45.8
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh-HHhCCCEEEEEC---CCHHHHHHHHHHHHhcCC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ-PIANGAFVLSID---TDFDGCMKLIREVTSELP 292 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q-~~~~GA~Vi~v~---g~~dd~~~~~~~~~~~~~ 292 (521)
...||+..++.-|.++|..-++.|-++++.- . +..++.+ ...+|.+++.+. .+.+++.+.++++.++.|
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~-r---~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITG-R---RKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEE-S---CHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEE-C---CHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3578888888889999988889999877653 2 2334433 234465554444 346677777777766644
No 193
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=27.78 E-value=1.1e+02 Score=28.98 Aligned_cols=69 Identities=12% Similarity=0.071 Sum_probs=41.1
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHh-----CCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIA-----NGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~-----~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.+++....+.|.+++++.-.. ....+ ...+.. .|.++..+.+| .++..+.++++.++
T Consensus 20 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 97 (303)
T 1yxm_A 20 VAIVTGGATGIGKAIVKELLELGSNVVIASRKL-ERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT 97 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHH
Confidence 578888889999999988888898877654221 01111 112322 46666666554 44455555555443
No 194
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=27.75 E-value=1.1e+02 Score=28.53 Aligned_cols=30 Identities=13% Similarity=0.070 Sum_probs=23.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
..+|+..+|--|.++|..-.+.|.+++++.
T Consensus 7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 36 (260)
T 2qq5_A 7 VCVVTGASRGIGRGIALQLCKAGATVYITG 36 (260)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 567878888889999988788898876653
No 195
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=27.67 E-value=1.6e+02 Score=27.39 Aligned_cols=72 Identities=11% Similarity=0.055 Sum_probs=42.1
Q ss_pred ceEEEEeCCch--HHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh-HHh-CC--CEEEEEC-CCHHHHHHHHHHHHhcCC
Q 009957 220 VVGVGCASTGD--TSAALSAYCASAGIPSIVFLPANKISIAQLVQ-PIA-NG--AFVLSID-TDFDGCMKLIREVTSELP 292 (521)
Q Consensus 220 ~~~Vv~aSSGN--~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q-~~~-~G--A~Vi~v~-g~~dd~~~~~~~~~~~~~ 292 (521)
...||+..+|+ -|.++|..-++.|-++++..-.. ....+... +.. .+ +..+.+| .+.+++.+.+++..++.+
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE-RSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVG 85 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35677765453 58899988888999887765332 12222222 222 23 4455555 456667777777666543
No 196
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=27.66 E-value=1.5e+02 Score=28.08 Aligned_cols=82 Identities=12% Similarity=0.075 Sum_probs=49.4
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---ccccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP---IYLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
|+.++.-.. .+-..-...+...|++|+.++-+.+.+.+.++++.+..+ .+..+-.++ +....+.-++.++++
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~---~~v~~~~~~~~~~~G- 83 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKK---KDVEEFVRRTFETYS- 83 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH---HHHHHHHHHHHHHcC-
Confidence 345555432 122222334567899999999888777777777644322 122332343 334556667788887
Q ss_pred CCCcEEEEcCC
Q 009957 321 EVPDWVIVPGG 331 (521)
Q Consensus 321 ~~pD~VvVP~G 331 (521)
.+|.+|--.|
T Consensus 84 -~iDiLVNNAG 93 (254)
T 4fn4_A 84 -RIDVLCNNAG 93 (254)
T ss_dssp -CCCEEEECCC
T ss_pred -CCCEEEECCc
Confidence 7898887776
No 197
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=27.60 E-value=1.2e+02 Score=28.60 Aligned_cols=71 Identities=18% Similarity=0.112 Sum_probs=43.0
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccC---------CcCCHHhHH----hHHhCCCEEEEECCC---HHHHHHH
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPA---------NKISIAQLV----QPIANGAFVLSIDTD---FDGCMKL 283 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~---------~~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~ 283 (521)
...+|+..+|--|.++|..-.+.|.+++++--. ...+..++. .+...|.++..+..| .++..+.
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 91 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV 91 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 357888888888999998888889988876321 001222322 234556666555443 4455555
Q ss_pred HHHHHhc
Q 009957 284 IREVTSE 290 (521)
Q Consensus 284 ~~~~~~~ 290 (521)
++++.++
T Consensus 92 ~~~~~~~ 98 (277)
T 3tsc_A 92 VDDGVAA 98 (277)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555444
No 198
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=27.56 E-value=93 Score=28.95 Aligned_cols=66 Identities=12% Similarity=0.137 Sum_probs=40.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHH-hC--CCEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPI-AN--GAFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~-~~--GA~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-. ..+...+. .. ++..+.+| .+.++..+.++++.++
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 14 KAIVTGGSKGIGAAIARALDKAGATVAIADLD----VMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDA 83 (263)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 57888888999999998888889887765322 22333222 22 45555554 3345555555555443
No 199
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=27.50 E-value=97 Score=29.64 Aligned_cols=70 Identities=10% Similarity=0.034 Sum_probs=43.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCc-CCHHhH-HhHHhCCCEEEEECCCH---HHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANK-ISIAQL-VQPIANGAFVLSIDTDF---DGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~-~s~~k~-~q~~~~GA~Vi~v~g~~---dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.++++..-... ....++ ..+...|.++..+..|. +++.+.++++.++
T Consensus 51 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 51 KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 5788888888899999888889998877653210 011111 22456777777776653 4445555555444
No 200
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=27.31 E-value=14 Score=36.32 Aligned_cols=26 Identities=12% Similarity=0.098 Sum_probs=18.1
Q ss_pred CCCCCCCccCCCC-----------ceeecC-CCCccee
Q 009957 84 AGPDSPEFYSLDE-----------IVYRSR-SGGLLDV 109 (521)
Q Consensus 84 ~~~~cg~~~~~~~-----------~~~~c~-cGGll~~ 109 (521)
.|..|++.|+.++ .+-+|+ |||++.+
T Consensus 138 ~C~~C~~~~~~~~~~~~~~~~~~~~~P~C~~Cgg~lrP 175 (289)
T 1q1a_A 138 HCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKP 175 (289)
T ss_dssp EETTTCCEECHHHHHHHHTCSSCCSCCBCTTTCCBEEE
T ss_pred EECCCCCCCcHHHHHHHHhhccCCCCccCCCCCCEECC
Confidence 5888999887532 234684 9998765
No 201
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=27.19 E-value=1.2e+02 Score=28.78 Aligned_cols=66 Identities=12% Similarity=0.084 Sum_probs=41.3
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCCCEEEEECC---CHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANGAFVLSIDT---DFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g---~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++.-. ..+...+ ...|.++..+.. +.+++.+.++++.++
T Consensus 29 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVN----EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAK 98 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 56888888888999998888889987776422 2233322 234555544444 345566666665554
No 202
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=26.91 E-value=1.6e+02 Score=26.98 Aligned_cols=83 Identities=14% Similarity=0.134 Sum_probs=48.7
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---ccccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP---IYLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
+.+++.-.+ .+-..-..++...|++|+.++-+.+...+..+++.+..+ .+..+-.|+ +....+.-++.++++
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~g- 85 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP---ESAKAMADRTLAEFG- 85 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCH---HHHHHHHHHHHHHcC-
Confidence 344555432 222233445667899999998887777666666644322 222232333 233455566677776
Q ss_pred CCCcEEEEcCCc
Q 009957 321 EVPDWVIVPGGN 332 (521)
Q Consensus 321 ~~pD~VvVP~G~ 332 (521)
.+|.||...|.
T Consensus 86 -~id~li~~Ag~ 96 (253)
T 3qiv_A 86 -GIDYLVNNAAI 96 (253)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCc
Confidence 68999888775
No 203
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=26.84 E-value=13 Score=35.72 Aligned_cols=26 Identities=12% Similarity=0.097 Sum_probs=17.7
Q ss_pred CCCCCCCccCCCC--------ceeecC-CCCccee
Q 009957 84 AGPDSPEFYSLDE--------IVYRSR-SGGLLDV 109 (521)
Q Consensus 84 ~~~~cg~~~~~~~--------~~~~c~-cGGll~~ 109 (521)
.|..|++.|+.++ .+-+|+ |||++.+
T Consensus 123 ~C~~C~~~~~~~~~~~~~~~~~~p~C~~Cgg~lrP 157 (246)
T 1yc5_A 123 YCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRP 157 (246)
T ss_dssp EETTTCCEEEHHHHHHHTTTCSSCBCTTTCCBEEE
T ss_pred EcCCCCCCCcHHHHHHHhccCCCCCCCCCCCccCc
Confidence 5888998876532 234684 9998765
No 204
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=26.72 E-value=99 Score=29.60 Aligned_cols=71 Identities=8% Similarity=0.015 Sum_probs=41.1
Q ss_pred ceEEEEeCCch--HHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHH-hCC-CEEEEEC-CCHHHHHHHHHHHHhcC
Q 009957 220 VVGVGCASTGD--TSAALSAYCASAGIPSIVFLPANKISIAQLVQPI-ANG-AFVLSID-TDFDGCMKLIREVTSEL 291 (521)
Q Consensus 220 ~~~Vv~aSSGN--~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~-~~G-A~Vi~v~-g~~dd~~~~~~~~~~~~ 291 (521)
...+|+..+|. -|.++|..-.+.|.++++..-.. .....+..+. ..| +..+.+| .+.++..+.++++.++.
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD-ALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH-HHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 35688877777 89999988888899877654321 1112222222 223 3334344 34555666666666554
No 205
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=26.69 E-value=1.8e+02 Score=28.74 Aligned_cols=50 Identities=12% Similarity=0.064 Sum_probs=35.6
Q ss_pred chHHHHHHHHHHhcCCCEEEEccCCcCCHH-hHHhHHhCCCEEEEECCCHHH
Q 009957 229 GDTSAALSAYCASAGIPSIVFLPANKISIA-QLVQPIANGAFVLSIDTDFDG 279 (521)
Q Consensus 229 GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~-k~~q~~~~GA~Vi~v~g~~dd 279 (521)
||.+.|+...+++.|+++++..|++-.++. -+..++..|+++...+ +.++
T Consensus 167 ~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~-d~~e 217 (308)
T 1ml4_A 167 GRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETT-TLED 217 (308)
T ss_dssp CHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEES-CTHH
T ss_pred CchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEc-CHHH
Confidence 588999999999999999999998732322 2344556788765443 4443
No 206
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=26.60 E-value=1.7e+02 Score=27.66 Aligned_cols=37 Identities=32% Similarity=0.596 Sum_probs=23.2
Q ss_pred CCcEEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCch
Q 009957 322 VPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANP 368 (521)
Q Consensus 322 ~pD~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~ 368 (521)
.||.|||-- ---.-.++- |+.++|+ .+||+-.+||+|
T Consensus 157 ~Pdll~v~D-p~~e~~ai~----EA~~l~I-----PvIaivDTn~dp 193 (231)
T 3bbn_B 157 LPDIVIIVD-QQEEYTALR----ECITLGI-----PTICLIDTNCNP 193 (231)
T ss_dssp CCSEEEESC-TTTTHHHHH----HHHTTTC-----CEEECCCSSSCC
T ss_pred CCCEEEEeC-CccccHHHH----HHHHhCC-----CEEEEecCCCCc
Confidence 589877652 223333443 8888875 367877777764
No 207
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=26.59 E-value=1.7e+02 Score=28.28 Aligned_cols=49 Identities=8% Similarity=-0.120 Sum_probs=34.4
Q ss_pred CceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCCCEEE
Q 009957 219 PVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANGAFVL 271 (521)
Q Consensus 219 ~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi 271 (521)
+.+.++.+.+|..|.+++.+++..|.+++++.. ++.++..+ +.+|++.+
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~----~~~~~~~~~~~~g~~~~ 199 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAG----GAEKCRFLVEELGFDGA 199 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHTTCCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHcCCCEE
Confidence 334566666688999999999999997666543 34566666 67887543
No 208
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=26.57 E-value=1.6e+02 Score=27.35 Aligned_cols=83 Identities=18% Similarity=0.077 Sum_probs=47.6
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---ccccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP---IYLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
+.+++.-.+ .+-..-..++...|++|+.++-+.+...+..+++.+..+ ++..+-.++ +....+.-++.++++
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~v~~~~~~~~~~~g- 105 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHS---DAIAAFATGVLAAHG- 105 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCH---HHHHHHHHHHHHhcC-
Confidence 455555443 222223344667899999888777766666666543322 122222233 333445556667776
Q ss_pred CCCcEEEEcCCc
Q 009957 321 EVPDWVIVPGGN 332 (521)
Q Consensus 321 ~~pD~VvVP~G~ 332 (521)
.+|.||..+|.
T Consensus 106 -~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 -RCDVLVNNAGV 116 (262)
T ss_dssp -CCSEEEECCCC
T ss_pred -CCCEEEECCCc
Confidence 68988888775
No 209
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=26.43 E-value=63 Score=29.48 Aligned_cols=65 Identities=15% Similarity=0.157 Sum_probs=39.1
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh----HH-hCCCEEEEECCC---HHHHHHHHHHHHh
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ----PI-ANGAFVLSIDTD---FDGCMKLIREVTS 289 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q----~~-~~GA~Vi~v~g~---~dd~~~~~~~~~~ 289 (521)
..+|+..+|.-|.++|..-...|.++++..-. ..+... +. ..|.++..+..| .++..+.++++.+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARS----VDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 56888888889999998888899886665432 122221 22 456666655544 3444444444433
No 210
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=26.38 E-value=60 Score=30.78 Aligned_cols=30 Identities=17% Similarity=0.078 Sum_probs=23.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
..+|+..+|--|.++|..-.+.|.+++++.
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~ 59 (270)
T 3ftp_A 30 VAIVTGASRGIGRAIALELARRGAMVIGTA 59 (270)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 567777778889999987788898877654
No 211
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=26.30 E-value=1.7e+02 Score=27.47 Aligned_cols=52 Identities=17% Similarity=0.080 Sum_probs=35.3
Q ss_pred eEEEEeCCchHHHHHHHHHHhcC-CCEEEEccCCcCCHHhHHhHHhCCCEEEEEC
Q 009957 221 VGVGCASTGDTSAALSAYCASAG-IPSIVFLPANKISIAQLVQPIANGAFVLSID 274 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~G-i~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~ 274 (521)
+.+|+..||..|.+++......| .+++++.-.. +..+...+...|++++..|
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~--~~~~~~~l~~~~~~~~~~D 59 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNP--RKKAAKELRLQGAEVVQGD 59 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCT--TSHHHHHHHHTTCEEEECC
T ss_pred EEEEECCCchHHHHHHHHHHhcCCceEEEEEcCC--CCHHHHHHHHCCCEEEEec
Confidence 57888999999999997766667 8888776432 2222334445688776544
No 212
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=26.25 E-value=98 Score=28.56 Aligned_cols=30 Identities=13% Similarity=0.068 Sum_probs=24.9
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
..+|+..+|.-|.+++....+.|.+++++.
T Consensus 9 ~vlITGasggiG~~la~~l~~~G~~V~~~~ 38 (264)
T 2pd6_A 9 LALVTGAGSGIGRAVSVRLAGEGATVAACD 38 (264)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 578888889999999988888898877664
No 213
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=26.22 E-value=1e+02 Score=29.28 Aligned_cols=66 Identities=11% Similarity=0.064 Sum_probs=40.2
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCCC--EEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANGA--FVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA--~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++--. ..+.... ..+|. ..+.+| .+.+++.+.++++.++
T Consensus 31 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 31 VAIVTGAGAGIGLAVARRLADEGCHVLCADID----GDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp EEEETTTTSTHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHH
Confidence 56777777888999998888889987775422 2232222 22344 444444 3455566666666554
No 214
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=26.18 E-value=1.4e+02 Score=26.28 Aligned_cols=48 Identities=10% Similarity=0.048 Sum_probs=33.1
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEE
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSI 273 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v 273 (521)
+.+|+..||..|.+++......|.+++++.-.. .+...+. .+++++..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~----~~~~~~~-~~~~~~~~ 49 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA----GKITQTH-KDINILQK 49 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS----HHHHHHC-SSSEEEEC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc----hhhhhcc-CCCeEEec
Confidence 357888889999999988888898888776432 2333332 56666544
No 215
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=26.12 E-value=1.8e+02 Score=26.49 Aligned_cols=67 Identities=16% Similarity=0.201 Sum_probs=42.0
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCC-HHhHHhHHhCCCEEEEECCCH---HHHHHHHHHH
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKIS-IAQLVQPIANGAFVLSIDTDF---DGCMKLIREV 287 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k~~q~~~~GA~Vi~v~g~~---dd~~~~~~~~ 287 (521)
..+|+..+|--|.++|..-.+.|.+++++.-.+... ......+...|.++..+..|. ++..+.++++
T Consensus 9 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (255)
T 3icc_A 9 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSL 79 (255)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHH
Confidence 567777778889999988888999888865443111 112233556788877766543 3344444443
No 216
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=25.82 E-value=20 Score=35.29 Aligned_cols=26 Identities=12% Similarity=0.111 Sum_probs=18.7
Q ss_pred CCCCCCCccCCCC--------ceeecC-CCCccee
Q 009957 84 AGPDSPEFYSLDE--------IVYRSR-SGGLLDV 109 (521)
Q Consensus 84 ~~~~cg~~~~~~~--------~~~~c~-cGGll~~ 109 (521)
.|..|++.|+.++ .+-+|+ |||++-|
T Consensus 141 ~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~lrP 175 (285)
T 3glr_A 141 TCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKP 175 (285)
T ss_dssp EETTTCCEEEGGGGHHHHHTTCCCBCTTTCCBEEE
T ss_pred EECCCCCcCCHHHHHHHhhcCCCCCCCCCCCccCC
Confidence 6889999887543 234684 9998765
No 217
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=25.82 E-value=91 Score=28.51 Aligned_cols=30 Identities=10% Similarity=0.095 Sum_probs=24.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
..+|+..+|.-|.+++..-...|.+++++.
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~ 33 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALD 33 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 468888889999999988888898877654
No 218
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=25.76 E-value=1.9e+02 Score=26.70 Aligned_cols=31 Identities=10% Similarity=0.102 Sum_probs=25.4
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
...+|+..+|.-|.+++..-...|.+++++.
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEc
Confidence 3578888889999999988888898877763
No 219
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=25.47 E-value=2.8e+02 Score=27.77 Aligned_cols=58 Identities=12% Similarity=0.083 Sum_probs=37.8
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhH----HhCCCEEEEECCCHH
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQP----IANGAFVLSIDTDFD 278 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~----~~~GA~Vi~v~g~~d 278 (521)
.+..+++=.+|.+.|+...+++.|+++++..|++-.++.. +..+ ...|+.+...+ +.+
T Consensus 180 lkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~-d~~ 242 (340)
T 4ep1_A 180 IKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILH-NPE 242 (340)
T ss_dssp CEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEES-CHH
T ss_pred CEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEC-CHH
Confidence 3444444446889999999999999999999987333222 2222 25687776544 444
No 220
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=25.46 E-value=2.2e+02 Score=26.71 Aligned_cols=23 Identities=22% Similarity=0.260 Sum_probs=21.0
Q ss_pred CchHHHHHHHHHHhcCCCEEEEc
Q 009957 228 TGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 228 SGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
||-.|.++|-++...|-+++++.
T Consensus 33 Sg~iG~aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGANVTLVS 55 (226)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccHHHHHHHHHHHHCCCEEEEEE
Confidence 79999999999999999998875
No 221
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=25.33 E-value=1.3e+02 Score=28.57 Aligned_cols=66 Identities=14% Similarity=0.134 Sum_probs=42.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCCCEEEEECC---CHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANGAFVLSIDT---DFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g---~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++-- +..++..+ ..+|.++..+.. +.+++.+.++++.++
T Consensus 7 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 7 VALITGGASGLGRALVDRFVAEGARVAVLDK----SAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEeC----CHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5688888888899999888888988777642 23333332 345655555544 355566666666554
No 222
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=25.32 E-value=2.4e+02 Score=25.87 Aligned_cols=63 Identities=13% Similarity=-0.051 Sum_probs=42.1
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEEC-CCHHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID-TDFDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~-g~~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-.. .. ...|+..+.+| .+.++..+.++++.++.
T Consensus 9 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--~~------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 9 NVWVTGAGKGIGYATALAFVEAGAKVTGFDQAF--TQ------EQYPFATEVMDVADAAQVAQVCQRLLAET 72 (250)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCC--CS------SCCSSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCch--hh------hcCCceEEEcCCCCHHHHHHHHHHHHHHc
Confidence 578888889999999988888999887765332 11 12456666555 34556666666665554
No 223
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=25.29 E-value=1.4e+02 Score=28.58 Aligned_cols=31 Identities=26% Similarity=0.290 Sum_probs=22.6
Q ss_pred CceEEEEeCCchHHHHHHHHHHhcCCCEEEE
Q 009957 219 PVVGVGCASTGDTSAALSAYCASAGIPSIVF 249 (521)
Q Consensus 219 ~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~ 249 (521)
++..|+...+.....+++..+...+++++.+
T Consensus 72 ~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~ 102 (358)
T 3hut_A 72 RVVGVLGDFSSTVSMAAGSIYGKEGMPQLSP 102 (358)
T ss_dssp TEEEEEECSSHHHHHHHHHHHHHHTCCEEES
T ss_pred CcEEEEcCCCcHHHHHHHHHHHHCCCcEEec
Confidence 4667776555555667778888899998775
No 224
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=25.28 E-value=1.1e+02 Score=30.47 Aligned_cols=92 Identities=12% Similarity=0.072 Sum_probs=44.7
Q ss_pred eCCchHHHHHHHHHHhcCCCEEEEccCC-c---------------CCHHhHHh-HHhCCCEEEEECCCHHHHHHHHHHHH
Q 009957 226 ASTGDTSAALSAYCASAGIPSIVFLPAN-K---------------ISIAQLVQ-PIANGAFVLSIDTDFDGCMKLIREVT 288 (521)
Q Consensus 226 aSSGN~g~AlAa~aa~~Gi~~~V~vP~~-~---------------~s~~k~~q-~~~~GA~Vi~v~g~~dd~~~~~~~~~ 288 (521)
..+|..+..++..+++.|++++++-..+ . .+...+.. ++.++++.+...+ ++.....+.+++
T Consensus 13 ~g~g~~~~~~~~a~~~~G~~~v~v~~~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~~~d~v~~~~-~~~~~~~~a~~~ 91 (403)
T 4dim_A 13 LGAGRGQLGLYKAAKELGIHTIAGTMPNAHKPCLNLADEISYMDISNPDEVEQKVKDLNLDGAATCC-LDTGIVSLARIC 91 (403)
T ss_dssp ECCCGGGHHHHHHHHHHTCEEEEEECSSCCHHHHHHCSEEEECCTTCHHHHHHHTTTSCCSEEECCS-CSTTHHHHHHHH
T ss_pred ECCcHhHHHHHHHHHHCCCEEEEEcCCCCCCcchhhCCeEEEecCCCHHHHHHHHHHcCCCEEEeCC-cchhHHHHHHHH
Confidence 3334445556666666666666654221 0 01222222 2345666554332 222222344455
Q ss_pred hcCCccccCCCChHhHhhHHHHHHHHHHhcC
Q 009957 289 SELPIYLANSLNSLRLEGQKTAAVEILQQFD 319 (521)
Q Consensus 289 ~~~~~~~~ns~Np~~i~G~~T~a~EI~eQl~ 319 (521)
++.++ ..++.....+..-|....+++++.+
T Consensus 92 ~~~gl-~g~~~~~~~~~~dK~~~~~~l~~~g 121 (403)
T 4dim_A 92 DKENL-VGLNEEAAIMCGDKYKMKEAFKKYN 121 (403)
T ss_dssp HHHTC-SSCCHHHHHHHHCHHHHHHHHHHHT
T ss_pred HHcCc-CCCCHHHHHHHhCHHHHHHHHHHcC
Confidence 55554 2233334556677777777777765
No 225
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=25.23 E-value=1.7e+02 Score=27.61 Aligned_cols=68 Identities=16% Similarity=0.100 Sum_probs=43.5
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHH----hHHh-CCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLV----QPIA-NGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~-~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
..+|+..+|--|.++|..-.+.|.++++..-.+ ..++. .+.. .+..+..+..| .+++.+.++++.++.
T Consensus 27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 27 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGA---PDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEECCCC---HHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC---hHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 568888888889999988888999877654322 22222 2333 36677666654 445666666666554
No 226
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=25.08 E-value=66 Score=30.27 Aligned_cols=69 Identities=16% Similarity=0.058 Sum_probs=39.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhH-HhHHh-CCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQL-VQPIA-NGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~-~q~~~-~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.++|..-.+.|.+++++.-.. ....+. ..+.. .|.++..+..| .+++.+.++++.++
T Consensus 22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 22 RALITGATKGIGADIARAFAAAGARLVLSGRDV-SELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 567777778889999988888898876654321 111111 11222 46666555543 34455555555444
No 227
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=24.90 E-value=1.2e+02 Score=28.78 Aligned_cols=66 Identities=18% Similarity=0.202 Sum_probs=39.8
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCC--CEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANG--AFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~G--A~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++.-. ..++..+ ...+ +..+.+| .+.+++.+.++++.++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRR----LDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC----HHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 56777777888999998888889987665322 2233332 2233 4444444 3455566666665554
No 228
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=24.87 E-value=2.4e+02 Score=26.39 Aligned_cols=83 Identities=13% Similarity=-0.010 Sum_probs=46.5
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC-c--cccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP-I--YLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~-~--~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
+++++.-.+ .+-..-..++...|++|+.++-+.+...+.++++.+... . +..+-.++ +....+.-++.++++
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~g- 102 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSE---SEIIEAFARLDEQGI- 102 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH---HHHHHHHHHHHHHTC-
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH---HHHHHHHHHHHHHCC-
Confidence 455555543 222233344667899998888777666666666543221 1 11222233 233445556666766
Q ss_pred CCCcEEEEcCCc
Q 009957 321 EVPDWVIVPGGN 332 (521)
Q Consensus 321 ~~pD~VvVP~G~ 332 (521)
.+|.+|--.|.
T Consensus 103 -~iD~lv~nAg~ 113 (271)
T 4ibo_A 103 -DVDILVNNAGI 113 (271)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 68888887763
No 229
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=24.85 E-value=1.3e+02 Score=28.23 Aligned_cols=66 Identities=15% Similarity=0.022 Sum_probs=39.9
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh-HHhCCCEEEEECC---CHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ-PIANGAFVLSIDT---DFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q-~~~~GA~Vi~v~g---~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.+++..-...|.+++++.-.. .++.. ...++..+..+.. +.++..+.++++.++
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT----EALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLAR 76 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG----GGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence 567878888889999988888898877765332 12222 2334444444443 344555566655444
No 230
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=24.76 E-value=1.7e+02 Score=27.41 Aligned_cols=67 Identities=12% Similarity=0.060 Sum_probs=40.3
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCCCEEEEECC---CHHHHHHHHHHHHhcC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANGAFVLSIDT---DFDGCMKLIREVTSEL 291 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g---~~dd~~~~~~~~~~~~ 291 (521)
...+|+..+|--|.++|..-.+.|.+++++.- +..++..+ ..+|.++..+.. +.++..+.++++ ++.
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~ 101 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADL----AAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQL 101 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHh
Confidence 35788888888899999877888998766532 22333332 233544444443 345556666655 443
No 231
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=24.73 E-value=1.6e+02 Score=28.74 Aligned_cols=48 Identities=10% Similarity=-0.034 Sum_probs=33.6
Q ss_pred CceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEE
Q 009957 219 PVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFV 270 (521)
Q Consensus 219 ~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~V 270 (521)
+...++.+.+|..|.+++..++..|.+++++.... .++..++.+|+..
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~----~~~~~~~~~g~~~ 217 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGE----GKEELFRSIGGEV 217 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECST----THHHHHHHTTCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCH----HHHHHHHHcCCce
Confidence 34567777778899999999999999776655432 2445556678753
No 232
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=24.61 E-value=19 Score=36.66 Aligned_cols=26 Identities=12% Similarity=0.098 Sum_probs=18.3
Q ss_pred CCCCCCCccCCCC-----------ceeecC-CCCccee
Q 009957 84 AGPDSPEFYSLDE-----------IVYRSR-SGGLLDV 109 (521)
Q Consensus 84 ~~~~cg~~~~~~~-----------~~~~c~-cGGll~~ 109 (521)
.|..|++.|+.++ .+-+|+ |||++.+
T Consensus 146 ~C~~C~~~~~~~~~~~~~~~~~~~~~P~Cp~Cgg~lrP 183 (361)
T 1q14_A 146 HCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELVKP 183 (361)
T ss_dssp EETTTCCEECTHHHHHHTTSSSCSCCCBCTTTCCBEEE
T ss_pred CcCCCCccCcHHHHHHHHhhcccCCCCCCcCCCCEeCC
Confidence 5889999887532 124685 9998765
No 233
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=24.50 E-value=1.2e+02 Score=28.25 Aligned_cols=69 Identities=19% Similarity=0.165 Sum_probs=40.2
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCC-HHhH-HhHHhC-CCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKIS-IAQL-VQPIAN-GAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k~-~q~~~~-GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.+++..-.+.|.+++++.-.. .. ..+. ..+... |.++..+..| .++..+.++++.++
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGD-AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC-HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc-chHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 567777778889999988888899877654321 11 1111 122222 6666666655 34455555555444
No 234
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=24.47 E-value=42 Score=26.88 Aligned_cols=28 Identities=14% Similarity=0.082 Sum_probs=21.9
Q ss_pred CCCCCCCCccCCCCceeecCCCCcceecc
Q 009957 83 NAGPDSPEFYSLDEIVYRSRSGGLLDVQH 111 (521)
Q Consensus 83 ~~~~~cg~~~~~~~~~~~c~cGGll~~~~ 111 (521)
+.|..|++.+.+. ..+.|+||+.|=-.+
T Consensus 26 ~rC~~C~kkvgl~-~~f~CrCg~~FC~~H 53 (85)
T 1wff_A 26 KHCFLCGKKTGLA-TSFECRCGNNFCASH 53 (85)
T ss_dssp CBCSSSCCBCSSS-SCEECTTCCEECTTT
T ss_pred ccchhhCCeeccc-CCeEcCCCCEecccC
Confidence 4688899998863 368899999986554
No 235
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=24.31 E-value=1.7e+02 Score=30.20 Aligned_cols=72 Identities=14% Similarity=0.060 Sum_probs=45.4
Q ss_pred ceEEEEeCCchHHHHHHHHHHh-cCCCEEEEccCCcCCHH-----------h-HHhHHhCCCEEEEECCC---HHHHHHH
Q 009957 220 VVGVGCASTGDTSAALSAYCAS-AGIPSIVFLPANKISIA-----------Q-LVQPIANGAFVLSIDTD---FDGCMKL 283 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~-~Gi~~~V~vP~~~~s~~-----------k-~~q~~~~GA~Vi~v~g~---~dd~~~~ 283 (521)
...+|+..|+--|.|+|...+. .|-+++++-=....... . ...+...|..+..+.+| .+++.+.
T Consensus 62 KvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~ 141 (422)
T 3s8m_A 62 KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQV 141 (422)
T ss_dssp SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 3567877777789999977777 89988776422111111 1 13456778777666544 4556677
Q ss_pred HHHHHhcC
Q 009957 284 IREVTSEL 291 (521)
Q Consensus 284 ~~~~~~~~ 291 (521)
++++.++.
T Consensus 142 v~~i~~~~ 149 (422)
T 3s8m_A 142 IELIKTEM 149 (422)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHc
Confidence 77777766
No 236
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=24.31 E-value=1.7e+02 Score=27.43 Aligned_cols=67 Identities=16% Similarity=0.085 Sum_probs=41.0
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHH-h-CCCEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPI-A-NGAFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~-~-~GA~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
...+|+..+|.-|.+++..-.+.|.+++++.- +..+...+. . .++..+.+| .+.++..+.++++.++
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDK----DESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 35788888899999999888888988776532 222333222 1 244555555 3455556666655444
No 237
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=24.24 E-value=1.3e+02 Score=28.38 Aligned_cols=70 Identities=11% Similarity=0.142 Sum_probs=42.0
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.+++..-.+.|.+++++.-.......+ ...+...|.++..+..| .++..+.++++.++
T Consensus 31 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 31 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 567778888889999988888899877765332100111 23345567666555544 44455555555443
No 238
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=24.23 E-value=18 Score=33.26 Aligned_cols=26 Identities=4% Similarity=-0.221 Sum_probs=18.8
Q ss_pred eeecCCCCCCCCCCccCCCCceeecC-CCCc
Q 009957 77 AKYVPFNAGPDSPEFYSLDEIVYRSR-SGGL 106 (521)
Q Consensus 77 ~~~v~~~~~~~cg~~~~~~~~~~~c~-cGGl 106 (521)
.+|+ |+.||..|+-++..-.|| ||.+
T Consensus 154 ~~~~----C~~CG~~~~g~~~p~~CP~C~~~ 180 (191)
T 1lko_A 154 TKWR----CRNCGYVHEGTGAPELCPACAHP 180 (191)
T ss_dssp EEEE----ETTTCCEEEEEECCSBCTTTCCB
T ss_pred ceEE----ECCCCCEeeCCCCCCCCCCCcCC
Confidence 3787 999999987433333797 8865
No 239
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=24.23 E-value=1.2e+02 Score=28.74 Aligned_cols=70 Identities=10% Similarity=0.116 Sum_probs=40.1
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhH-HhHH-hCCCEEEEECCC-------HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQL-VQPI-ANGAFVLSIDTD-------FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~-~q~~-~~GA~Vi~v~g~-------~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++.-.......++ ..+. ..|.++..+..| .+++.+.++++.++
T Consensus 25 ~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~ 103 (288)
T 2x9g_A 25 AAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA 103 (288)
T ss_dssp EEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence 5678777788899999887888988776643210011111 1233 456666555443 44455555554443
No 240
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=24.01 E-value=5.4e+02 Score=25.53 Aligned_cols=37 Identities=19% Similarity=0.285 Sum_probs=21.3
Q ss_pred CcEEEEcC-CchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCchh
Q 009957 323 PDWVIVPG-GNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANPL 369 (521)
Q Consensus 323 pD~VvVP~-G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~l 369 (521)
.+.||.++ ||-|...+.+ +..+|+ +++.+-|.+.+..
T Consensus 93 ~~~vv~aSsGN~g~alA~a-----a~~~G~-----~~~iv~p~~~~~~ 130 (372)
T 1p5j_A 93 CAHFVCSSAGNAGMAAAYA-----ARQLGV-----PATIVVPGTTPAL 130 (372)
T ss_dssp CCEEEECCSSHHHHHHHHH-----HHHHTC-----CEEEEECTTCCHH
T ss_pred CCEEEEeCCCHHHHHHHHH-----HHHcCC-----cEEEEECCCCCHH
Confidence 45676665 4444444433 456775 5666777776543
No 241
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=23.97 E-value=2.3e+02 Score=23.25 Aligned_cols=47 Identities=13% Similarity=-0.018 Sum_probs=33.0
Q ss_pred EEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEE
Q 009957 222 GVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSI 273 (521)
Q Consensus 222 ~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v 273 (521)
.++++. |..|.+++......|.+++++-. ++.+...+...|..++..
T Consensus 9 v~I~G~-G~iG~~la~~L~~~g~~V~~id~----~~~~~~~~~~~~~~~~~g 55 (141)
T 3llv_A 9 YIVIGS-EAAGVGLVRELTAAGKKVLAVDK----SKEKIELLEDEGFDAVIA 55 (141)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEES----CHHHHHHHHHTTCEEEEC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCeEEEEEC----CHHHHHHHHHCCCcEEEC
Confidence 445444 99999999888888999887743 344556666677766543
No 242
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=23.86 E-value=1.2e+02 Score=27.98 Aligned_cols=67 Identities=16% Similarity=0.040 Sum_probs=38.6
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEEECCC---HHHHHHHHHHHH
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLSIDTD---FDGCMKLIREVT 288 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~~ 288 (521)
..+|+..+|--|.+++....+.|.+++++.-.. ....+ ...+...|.++..+..| .++..+.++++.
T Consensus 16 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (266)
T 1xq1_A 16 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNE-YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVS 86 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHH
Confidence 567778888889999988888898877664321 01111 12234456555555444 334444444443
No 243
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=23.81 E-value=1.1e+02 Score=28.35 Aligned_cols=67 Identities=16% Similarity=0.092 Sum_probs=40.6
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh-HHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ-PIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q-~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
...+|+..+|--|.++|..-...|.+++++.- +..+... ....|.++..+..| .++..+.++++.++
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDI----NAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECS----CHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35788888888899999888888988776532 2223322 22336556555544 34445555555443
No 244
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=23.77 E-value=1.2e+02 Score=28.73 Aligned_cols=69 Identities=12% Similarity=0.078 Sum_probs=40.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhH-HhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQP-IANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~-~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++.-.. ....+ ...+ ...|.++..+..| .+++.+.++++.++
T Consensus 29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSL-PRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCH-HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 568888888889999988788898877654321 01111 1112 2346666555544 44555566655544
No 245
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=23.77 E-value=3.4e+02 Score=26.74 Aligned_cols=59 Identities=14% Similarity=0.028 Sum_probs=38.5
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhH-HhH----HhCCCEEEEECCCHHH
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQL-VQP----IANGAFVLSIDTDFDG 279 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~-~q~----~~~GA~Vi~v~g~~dd 279 (521)
.+..+++-.+|.+.|+...+++.|+++++..|++-.++..+ ..+ ...|+++...+ +.++
T Consensus 156 l~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~-d~~e 219 (315)
T 1pvv_A 156 VKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH-DPVK 219 (315)
T ss_dssp CEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES-CHHH
T ss_pred cEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe-CHHH
Confidence 34333333378899999999999999999999973333222 222 25688776553 4443
No 246
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=23.59 E-value=24 Score=33.52 Aligned_cols=32 Identities=9% Similarity=0.103 Sum_probs=22.8
Q ss_pred EEEEeCCchH--HHHHHHHHHhcCCCEEEEccCC
Q 009957 222 GVGCASTGDT--SAALSAYCASAGIPSIVFLPAN 253 (521)
Q Consensus 222 ~Vv~aSSGN~--g~AlAa~aa~~Gi~~~V~vP~~ 253 (521)
.++..||++. ++.+..++...|.+++++=++.
T Consensus 171 ~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~~~ 204 (235)
T 1s5p_A 171 FIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEP 204 (235)
T ss_dssp EEEESCCTTEETGGGHHHHHHHTTCEEEEEESSS
T ss_pred EEEECcCCchhhHHHHHHHHHHcCCeEEEEECCC
Confidence 4566777776 5666677777888888777664
No 247
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=23.59 E-value=1.1e+02 Score=29.66 Aligned_cols=47 Identities=17% Similarity=0.142 Sum_probs=33.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEE
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVL 271 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 271 (521)
+.++.+.+|..|.+++..++..|.+++++.. ++.++..++.+|++.+
T Consensus 143 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~----~~~~~~~~~~~Ga~~~ 189 (325)
T 3jyn_A 143 IILFHAAAGGVGSLACQWAKALGAKLIGTVS----SPEKAAHAKALGAWET 189 (325)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEES----SHHHHHHHHHHTCSEE
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHcCCCEE
Confidence 4445455788999999999999997666543 3456677777787544
No 248
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=23.58 E-value=1.9e+02 Score=27.81 Aligned_cols=87 Identities=20% Similarity=0.078 Sum_probs=53.2
Q ss_pred hcCCCEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCCCChHhHhhHHHHHHHHHHhcC
Q 009957 241 SAGIPSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANSLNSLRLEGQKTAAVEILQQFD 319 (521)
Q Consensus 241 ~~Gi~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~Np~~i~G~~T~a~EI~eQl~ 319 (521)
++.=|+.++.-.. .+-..-...+...||+|+.++-+.+...+.++++-.+.-.+..+-.++ +....+.-++.++++
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~---~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANL---AELDRLYEKVKAEAG 102 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCH---HHHHHHHHHHHHHHS
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCH---HHHHHHHHHHHHHcC
Confidence 3444677777553 233333445678899999998887777766666532211222333343 333456667778887
Q ss_pred CCCCcEEEEcCCc
Q 009957 320 WEVPDWVIVPGGN 332 (521)
Q Consensus 320 ~~~pD~VvVP~G~ 332 (521)
.+|.+|--+|.
T Consensus 103 --~iDiLVNNAG~ 113 (273)
T 4fgs_A 103 --RIDVLFVNAGG 113 (273)
T ss_dssp --CEEEEEECCCC
T ss_pred --CCCEEEECCCC
Confidence 68988887764
No 249
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=23.42 E-value=3.5e+02 Score=26.80 Aligned_cols=50 Identities=12% Similarity=0.170 Sum_probs=34.6
Q ss_pred chHHHHHHHHHHhcCCCEEEEccCCcCCHHhH-HhH----HhCCCEEEEECCCHHH
Q 009957 229 GDTSAALSAYCASAGIPSIVFLPANKISIAQL-VQP----IANGAFVLSIDTDFDG 279 (521)
Q Consensus 229 GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~-~q~----~~~GA~Vi~v~g~~dd 279 (521)
+|.+.|+...+++.|+++++..|++-.++..+ ..+ ...|+.+...+ +.++
T Consensus 178 ~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~-d~~e 232 (325)
T 1vlv_A 178 NNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTS-NLEE 232 (325)
T ss_dssp SHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEES-CHHH
T ss_pred cCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEc-CHHH
Confidence 48899999999999999999999873232222 222 25688776553 4443
No 250
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=23.38 E-value=1.2e+02 Score=29.46 Aligned_cols=70 Identities=13% Similarity=0.101 Sum_probs=44.0
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCC--------cCCHHhHH----hHHhCCCEEEEECCC---HHHHHHHHH
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPAN--------KISIAQLV----QPIANGAFVLSIDTD---FDGCMKLIR 285 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~--------~~s~~k~~----q~~~~GA~Vi~v~g~---~dd~~~~~~ 285 (521)
..+|+..+|--|.++|..-.+.|.+++++--.. .-+..++. .+...|.++..+..| .+++.+.++
T Consensus 48 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 127 (317)
T 3oec_A 48 VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVD 127 (317)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 567888888889999988888899988774210 01122322 244567777666544 445566666
Q ss_pred HHHhc
Q 009957 286 EVTSE 290 (521)
Q Consensus 286 ~~~~~ 290 (521)
++.++
T Consensus 128 ~~~~~ 132 (317)
T 3oec_A 128 EALAE 132 (317)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
No 251
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=23.33 E-value=1.4e+02 Score=27.66 Aligned_cols=67 Identities=10% Similarity=0.015 Sum_probs=41.4
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
...+|+..+|--|.++|..-.+.|.+++++.-. ..++..+ ..+|.++..+..| .+++.+.++++.++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN----ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 357888888888999998888889987765422 2333332 2335555545443 45555666655444
No 252
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=23.30 E-value=26 Score=33.60 Aligned_cols=26 Identities=27% Similarity=0.390 Sum_probs=18.1
Q ss_pred CCCCCCCccCCCCc--------eeecC-CCC-ccee
Q 009957 84 AGPDSPEFYSLDEI--------VYRSR-SGG-LLDV 109 (521)
Q Consensus 84 ~~~~cg~~~~~~~~--------~~~c~-cGG-ll~~ 109 (521)
.|..|++.|+.++. +-+|+ ||| ++.+
T Consensus 125 ~C~~C~~~~~~~~~~~~~~~~~~p~C~~Cgg~~lrP 160 (253)
T 1ma3_A 125 DCLDCHETYDWSEFVEDFNKGEIPRCRKCGSYYVKP 160 (253)
T ss_dssp EETTTCCEEEGGGTHHHHHTTCCCCCTTTCCSCEEE
T ss_pred eeCCCCCcCcHHHHHHHhccCCCCCCCCCCCccccc
Confidence 58899988876432 34684 999 7754
No 253
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.25 E-value=1e+02 Score=29.16 Aligned_cols=66 Identities=17% Similarity=0.124 Sum_probs=39.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHH----hHHhCCC---EEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLV----QPIANGA---FVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~----q~~~~GA---~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.++|..-.+.|.+++++.-. ..++. .+...|. ++..+..| .++..+.++++.++
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 8 TVIITGSSNGIGRTTAILFAQEGANVTITGRS----SERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 56787888888999998888889887766422 22222 2333444 44444443 44455555555444
No 254
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.24 E-value=1e+02 Score=29.65 Aligned_cols=66 Identities=14% Similarity=0.105 Sum_probs=39.9
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhH----HhHHhCCC---EEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQL----VQPIANGA---FVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~----~q~~~~GA---~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.++|..-.+.|.+++++.-. ..++ ..+...|. ++..+..| .++..+.++++.++
T Consensus 28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRN----EDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 56787888888999998888889987776432 2222 22334454 44444443 44555566555444
No 255
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=23.23 E-value=1.1e+02 Score=27.72 Aligned_cols=66 Identities=18% Similarity=0.108 Sum_probs=39.2
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh----HHh-CCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ----PIA-NGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q----~~~-~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-. ..+... +.. .|.++..+..| .++..+.++++.++
T Consensus 9 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 9 VSLVTGSTRGIGRAIAEKLASAGSTVIITGTS----GERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESS----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC----hHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 56788888899999998777889887766432 122221 222 35555555544 34445555555443
No 256
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=23.15 E-value=3e+02 Score=26.52 Aligned_cols=48 Identities=17% Similarity=0.102 Sum_probs=35.3
Q ss_pred EEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEE
Q 009957 222 GVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLS 272 (521)
Q Consensus 222 ~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~ 272 (521)
.|+..-.|-.|.....+++..|...++.+-. ++.|+...+.+||+.+.
T Consensus 163 ~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~---~~~k~~~a~~lGa~~~i 210 (346)
T 4a2c_A 163 NVIIIGAGTIGLLAIQCAVALGAKSVTAIDI---SSEKLALAKSFGAMQTF 210 (346)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred EEEEECCCCcchHHHHHHHHcCCcEEEEEec---hHHHHHHHHHcCCeEEE
Confidence 3444445778888888999999998777643 45678888899987653
No 257
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=22.94 E-value=2.3e+02 Score=26.84 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=23.4
Q ss_pred eEEEEeCCchHH---HHHHHHHHhcCCCEEEEccCC
Q 009957 221 VGVGCASTGDTS---AALSAYCASAGIPSIVFLPAN 253 (521)
Q Consensus 221 ~~Vv~aSSGN~g---~AlAa~aa~~Gi~~~V~vP~~ 253 (521)
+.+|.+-.||.| .++|.+-+..|.++.|+++..
T Consensus 60 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~ 95 (246)
T 1jzt_A 60 HVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKR 95 (246)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 344445568883 566677777899999998754
No 258
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=22.93 E-value=2.1e+02 Score=26.87 Aligned_cols=83 Identities=11% Similarity=0.089 Sum_probs=46.6
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---ccccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP---IYLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
+++++.-.+ .+-..-..++...|++|+.++-+.+...+.++++.+... .+..+-.++ +....+.-++.++++
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~g- 100 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST---DEVHAAVAAAVERFG- 100 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCH---HHHHHHHHHHHHHHC-
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCH---HHHHHHHHHHHHHcC-
Confidence 455555443 222223344667799998888777666666666543221 112222233 233445556667776
Q ss_pred CCCcEEEEcCCc
Q 009957 321 EVPDWVIVPGGN 332 (521)
Q Consensus 321 ~~pD~VvVP~G~ 332 (521)
.+|.||-..|.
T Consensus 101 -~id~lv~nAg~ 111 (279)
T 3sju_A 101 -PIGILVNSAGR 111 (279)
T ss_dssp -SCCEEEECCCC
T ss_pred -CCcEEEECCCC
Confidence 68888887764
No 259
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=22.93 E-value=2.7e+02 Score=25.64 Aligned_cols=69 Identities=17% Similarity=0.107 Sum_probs=40.1
Q ss_pred eEEEEeCC--chHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHh-CC-CEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCAST--GDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIA-NG-AFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSS--GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~-~G-A~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+ |.-|.+++..-.+.|.+++++.-... ....+..+.. .| +..+.+| .+.++..+.++++.++
T Consensus 10 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA 83 (261)
T ss_dssp EEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 46777766 78899999777778988777653321 1223333332 33 4445454 3345555566655444
No 260
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=22.82 E-value=3.2e+02 Score=22.53 Aligned_cols=94 Identities=15% Similarity=0.112 Sum_probs=50.7
Q ss_pred EEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCc--cccCCCChHhHhhHHHHHHHHHHhcCCCCCc
Q 009957 247 IVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPI--YLANSLNSLRLEGQKTAAVEILQQFDWEVPD 324 (521)
Q Consensus 247 ~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~--~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pD 324 (521)
++++..+.+...-..++...|.+|+.++-+.+.+.++. +.+. +..+..++. ++++.+-...|
T Consensus 10 viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-----~~g~~~i~gd~~~~~-----------~l~~a~i~~ad 73 (140)
T 3fwz_A 10 ALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELR-----ERGVRAVLGNAANEE-----------IMQLAHLECAK 73 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-----HTTCEEEESCTTSHH-----------HHHHTTGGGCS
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----HcCCCEEECCCCCHH-----------HHHhcCcccCC
Confidence 44555554433333456678999999998876544322 2232 233333432 23333323578
Q ss_pred EEEEcCCchhHHHHHHHHHHHHHHcCCCCCCCeEEEec
Q 009957 325 WVIVPGGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQ 362 (521)
Q Consensus 325 ~VvVP~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq 362 (521)
+|++.+++-....-+.. .++++. +..++|+-.
T Consensus 74 ~vi~~~~~~~~n~~~~~---~a~~~~---~~~~iiar~ 105 (140)
T 3fwz_A 74 WLILTIPNGYEAGEIVA---SARAKN---PDIEIIARA 105 (140)
T ss_dssp EEEECCSCHHHHHHHHH---HHHHHC---SSSEEEEEE
T ss_pred EEEEECCChHHHHHHHH---HHHHHC---CCCeEEEEE
Confidence 99999987543332332 344442 455777644
No 261
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=22.75 E-value=1.3e+02 Score=27.94 Aligned_cols=66 Identities=9% Similarity=-0.062 Sum_probs=39.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCC--CEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANG--AFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~G--A~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-. ..+...+ ...+ +.++.+| .+.++..+.++++.++
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 78 (260)
T 1nff_A 9 VALVSGGARGMGASHVRAMVAEGAKVVFGDIL----DEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTA 78 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHH
Confidence 57888888999999998888889887765422 2222222 1222 3444444 3345555666655544
No 262
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=22.57 E-value=1.4e+02 Score=29.07 Aligned_cols=70 Identities=14% Similarity=0.097 Sum_probs=41.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhH-HhHHhCCC--EEEEECC---CHHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQL-VQPIANGA--FVLSIDT---DFDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~-~q~~~~GA--~Vi~v~g---~~dd~~~~~~~~~~~~ 291 (521)
..+|+..||--|.+++..-...|.++++..-.. ....+. ..+...|. .+..+.. +.++..+.++++.++.
T Consensus 10 ~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 10 TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQ-DSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp EEEEETTTSTHHHHHHHHHHHTTCEEEEEESCH-HHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEcCCchHHHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 578888888899999988888899877654332 111111 22333333 4544443 3455566666665554
No 263
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=22.51 E-value=3.8e+02 Score=26.25 Aligned_cols=50 Identities=20% Similarity=0.165 Sum_probs=34.3
Q ss_pred chHHHHHHHHHHhcCCCEEEEccCCcCCHHhH-HhH----HhCCCEEEEECCCHHH
Q 009957 229 GDTSAALSAYCASAGIPSIVFLPANKISIAQL-VQP----IANGAFVLSIDTDFDG 279 (521)
Q Consensus 229 GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~-~q~----~~~GA~Vi~v~g~~dd 279 (521)
+|.+.|+...+++.|+++++..|++-.++..+ ..+ ...|+++...+ +.++
T Consensus 159 ~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~-d~~e 213 (307)
T 2i6u_A 159 NNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTA-DAHA 213 (307)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEES-CHHH
T ss_pred cCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE-CHHH
Confidence 48899999999999999999999983333222 222 25687776443 4443
No 264
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=22.47 E-value=5.1e+02 Score=24.73 Aligned_cols=35 Identities=29% Similarity=0.435 Sum_probs=20.7
Q ss_pred cEEEEc-CCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCCCch
Q 009957 324 DWVIVP-GGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAANANP 368 (521)
Q Consensus 324 D~VvVP-~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~~~~ 368 (521)
+.|+.+ +||-|...+.+ ++.+|+ +++.+-|.+.++
T Consensus 68 ~~vv~assGN~g~alA~~-----a~~~G~-----~~~iv~p~~~~~ 103 (313)
T 2q3b_A 68 TIILEPTSGNTGIALAMV-----CAARGY-----RCVLTMPETMSL 103 (313)
T ss_dssp CEEEEECSSHHHHHHHHH-----HHHHTC-----EEEEEEETTSCH
T ss_pred CEEEEeCCCHHHHHHHHH-----HHHcCC-----cEEEEECCCCCH
Confidence 455554 45666555544 456675 677777777554
No 265
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=22.40 E-value=2.5e+02 Score=26.26 Aligned_cols=70 Identities=9% Similarity=0.013 Sum_probs=40.8
Q ss_pred eEEEEeCC--chHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHh-CC-CEEEEEC-CCHHHHHHHHHHHHhcC
Q 009957 221 VGVGCAST--GDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIA-NG-AFVLSID-TDFDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSS--GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~-~G-A~Vi~v~-g~~dd~~~~~~~~~~~~ 291 (521)
..+|+..+ |--|.+++..-.+.|.+++++.-... ....+..+.. .| +.++.+| .+.++..+.++++.++.
T Consensus 23 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 23 RALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46777665 77899999877888988777653321 1223333332 33 4444444 34555666666665543
No 266
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=22.38 E-value=1.6e+02 Score=26.90 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=23.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
..+|+..+|.-|.+++..-...|.+++++.
T Consensus 16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~ 45 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYAAHGASVVLLG 45 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 567878888889999988788898876654
No 267
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=22.36 E-value=2.7e+02 Score=25.68 Aligned_cols=71 Identities=11% Similarity=0.032 Sum_probs=41.6
Q ss_pred eEEEEeCC--chHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHh-CC-CEEEEEC-CCHHHHHHHHHHHHhcCC
Q 009957 221 VGVGCAST--GDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIA-NG-AFVLSID-TDFDGCMKLIREVTSELP 292 (521)
Q Consensus 221 ~~Vv~aSS--GN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~-~G-A~Vi~v~-g~~dd~~~~~~~~~~~~~ 292 (521)
..+|+..+ |--|.+++..-.+.|.+++++.-.. .....+..+.. .| ..++.+| .+.++..+.++++.++.+
T Consensus 11 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 11 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46777666 7789999988788898877765332 12233333332 23 3344444 345556666666665543
No 268
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=22.25 E-value=1.3e+02 Score=28.21 Aligned_cols=66 Identities=14% Similarity=0.092 Sum_probs=39.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh-HHhCCCEEEEECCC---HHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ-PIANGAFVLSIDTD---FDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q-~~~~GA~Vi~v~g~---~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.++++.-- +..++.. ....|.++..+..| .++..+.++++.++
T Consensus 29 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 29 KALVTGATGGIGEAIARCFHAQGAIVGLHGT----REDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE 98 (266)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 5677777788899999888888987766532 2233333 23446555555543 44455555554443
No 269
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=22.24 E-value=24 Score=28.46 Aligned_cols=15 Identities=13% Similarity=0.182 Sum_probs=12.2
Q ss_pred ceeecCCCCCCCCCCccCC
Q 009957 76 SAKYVPFNAGPDSPEFYSL 94 (521)
Q Consensus 76 ~~~~v~~~~~~~cg~~~~~ 94 (521)
+.+|+ |+.||..|+.
T Consensus 33 m~~y~----C~vCGyvYD~ 47 (87)
T 1s24_A 33 YLKWI----CITCGHIYDE 47 (87)
T ss_dssp CCEEE----ETTTTEEEET
T ss_pred CceEE----CCCCCeEecC
Confidence 45788 9999998875
No 270
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=22.22 E-value=2.5e+02 Score=27.68 Aligned_cols=45 Identities=18% Similarity=-0.022 Sum_probs=32.8
Q ss_pred chHHHHHHHHHHhc-CCCEEEEccCCcCCHHh-HHhHHhCCCEEEEE
Q 009957 229 GDTSAALSAYCASA-GIPSIVFLPANKISIAQ-LVQPIANGAFVLSI 273 (521)
Q Consensus 229 GN~g~AlAa~aa~~-Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~v 273 (521)
+|.+.|+...+++. |+++++..|++-..+.. +..++..|+++...
T Consensus 166 ~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~ 212 (310)
T 3csu_A 166 GRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLH 212 (310)
T ss_dssp CHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEC
T ss_pred CchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEE
Confidence 68899999999999 99999999987323222 24455667775433
No 271
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=22.21 E-value=28 Score=25.17 Aligned_cols=14 Identities=21% Similarity=0.069 Sum_probs=10.2
Q ss_pred eecCCCCCCCCCCccCCC
Q 009957 78 KYVPFNAGPDSPEFYSLD 95 (521)
Q Consensus 78 ~~v~~~~~~~cg~~~~~~ 95 (521)
+|+ |+.||..|+.+
T Consensus 2 ~~~----C~~CGyvYd~~ 15 (52)
T 1yk4_A 2 KLS----CKICGYIYDED 15 (52)
T ss_dssp EEE----ESSSSCEEETT
T ss_pred cEE----eCCCCeEECCC
Confidence 566 88888888753
No 272
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=22.15 E-value=1.7e+02 Score=27.22 Aligned_cols=67 Identities=10% Similarity=-0.052 Sum_probs=40.6
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh----HHh-CCC-EEEEECC---CHHHHHHHHHHHHhc
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ----PIA-NGA-FVLSIDT---DFDGCMKLIREVTSE 290 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q----~~~-~GA-~Vi~v~g---~~dd~~~~~~~~~~~ 290 (521)
...+|+..+|--|.++|..-.+.|.+++++.-. ..+... +.. ++. ++..+.. +.+++.+.++++.++
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARD----GERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 356888888888999998888889987665422 222222 222 433 3544443 455566666666554
No 273
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=22.03 E-value=1.9e+02 Score=27.35 Aligned_cols=83 Identities=17% Similarity=0.163 Sum_probs=48.4
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---ccccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP---IYLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
+++++.-.+ .+-..-..++...|++|+.++-+.+...+.++++.+..+ .+..+-.++ +....+.-++.++++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~g- 104 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE---LQMRNAVRDLVLKFG- 104 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH---HHHHHHHHHHHHHhC-
Confidence 455655543 232333345667899999888877766666666543222 122222233 333455566677776
Q ss_pred CCCcEEEEcCCc
Q 009957 321 EVPDWVIVPGGN 332 (521)
Q Consensus 321 ~~pD~VvVP~G~ 332 (521)
.+|.+|--.|.
T Consensus 105 -~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 -HLDIVVANAGI 115 (283)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 68988887764
No 274
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=22.02 E-value=1.2e+02 Score=28.00 Aligned_cols=66 Identities=12% Similarity=0.043 Sum_probs=38.1
Q ss_pred eEEEEeCCchHHHHHHHHHHhcC---CCEEEEccCCcCCHHhHHhHHhCCCEEEEECCC---HHHHHHHHHHH
Q 009957 221 VGVGCASTGDTSAALSAYCASAG---IPSIVFLPANKISIAQLVQPIANGAFVLSIDTD---FDGCMKLIREV 287 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~G---i~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~---~dd~~~~~~~~ 287 (521)
..+|+..+|--|.+++....+.| .+++++.-.. ....++..+...+.++..+..| .++..+.++++
T Consensus 23 ~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 94 (267)
T 1sny_A 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNR-EQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADI 94 (267)
T ss_dssp EEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCT-TSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecCh-hhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHH
Confidence 56788888888999998888888 7777765432 1222333333334444444443 33344444443
No 275
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.89 E-value=4.4e+02 Score=23.69 Aligned_cols=43 Identities=9% Similarity=0.129 Sum_probs=26.6
Q ss_pred EeCHHHHHHHHHHHHhcC--CeeccchHHHHHHHHHHHhcCCCCCCCeEEEEeCC
Q 009957 417 EATEEELMDAMAQADSTG--MFICPHTGVALTALIKLRNSGVIGPLDRTVVVSTA 469 (521)
Q Consensus 417 ~Vsd~Ei~~A~~~l~~eG--i~~ePssA~alAa~~~l~~~g~i~~~~~vV~v~TG 469 (521)
-.+++|+.+.++.+.++| +++++....-+| . +. |-+.|++-+|
T Consensus 125 ~~~~~e~~~~i~~l~~~G~~vvVG~~~~~~~A--~---~~-----Gl~~vli~sg 169 (196)
T 2q5c_A 125 FSSEDEITTLISKVKTENIKIVVSGKTVTDEA--I---KQ-----GLYGETINSG 169 (196)
T ss_dssp ECSGGGHHHHHHHHHHTTCCEEEECHHHHHHH--H---HT-----TCEEEECCCC
T ss_pred eCCHHHHHHHHHHHHHCCCeEEECCHHHHHHH--H---Hc-----CCcEEEEecC
Confidence 457778888888886666 456665443333 2 22 3467777766
No 276
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=21.86 E-value=1.3e+02 Score=28.25 Aligned_cols=57 Identities=14% Similarity=0.143 Sum_probs=36.8
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcC--CHHhHHh---HHhCCCEEEEECCCHHH
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKI--SIAQLVQ---PIANGAFVLSIDTDFDG 279 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~--s~~k~~q---~~~~GA~Vi~v~g~~dd 279 (521)
+.+|+..||..|.+++......|.+++++.-.... .+.+... +...|++++ .+|+.|
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v--~~D~~d 67 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV--HGSIDD 67 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEE--CCCTTC
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEE--EeccCC
Confidence 46788888999999998878889988887643211 1333322 334577665 445544
No 277
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=21.83 E-value=2.2e+02 Score=26.76 Aligned_cols=83 Identities=12% Similarity=0.023 Sum_probs=48.6
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---ccccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP---IYLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
+++++...+ .+-..-..++...|++|+.++-+.+...+.++++.+..+ .+..+-.++ +....+.-++.++++
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~g- 80 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDR---HSVAAFAQAAVDTWG- 80 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCH---HHHHHHHHHHHHHcC-
Confidence 455555443 222223344667899999998777766666666544322 122232333 333455566777776
Q ss_pred CCCcEEEEcCCc
Q 009957 321 EVPDWVIVPGGN 332 (521)
Q Consensus 321 ~~pD~VvVP~G~ 332 (521)
.+|.+|-..|.
T Consensus 81 -~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 -RIDVLVNNAGV 91 (264)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 68999888774
No 278
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=21.78 E-value=1.6e+02 Score=31.08 Aligned_cols=68 Identities=12% Similarity=0.122 Sum_probs=43.7
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEc-cCCcCC--------------HHhHHhHHhCCCEEEEECCCH---HHHH
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFL-PANKIS--------------IAQLVQPIANGAFVLSIDTDF---DGCM 281 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v-P~~~~s--------------~~k~~q~~~~GA~Vi~v~g~~---dd~~ 281 (521)
...+|+..+|.-|.++|..-.+.|.+.+|++ ..+..+ ......+...|++|..+..|. ++..
T Consensus 252 ~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~ 331 (525)
T 3qp9_A 252 GTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAA 331 (525)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHH
Confidence 3567888888889999977778899977776 443111 222344667798887776554 3444
Q ss_pred HHHHHH
Q 009957 282 KLIREV 287 (521)
Q Consensus 282 ~~~~~~ 287 (521)
+.+.++
T Consensus 332 ~~~~~i 337 (525)
T 3qp9_A 332 RLLAGV 337 (525)
T ss_dssp HHHHTS
T ss_pred HHHHHH
Confidence 444443
No 279
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=21.77 E-value=1.1e+02 Score=29.86 Aligned_cols=48 Identities=13% Similarity=-0.002 Sum_probs=32.3
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEE
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVL 271 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 271 (521)
.+.++.+.+|..|.+++.+++..|.+++++.... .++..++.+|++.+
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~----~~~~~~~~lga~~~ 193 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN----KHTEELLRLGAAYV 193 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS----TTHHHHHHHTCSEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHhCCCcEE
Confidence 3445555556789999999999999877765442 25555666787644
No 280
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=21.75 E-value=86 Score=29.82 Aligned_cols=31 Identities=13% Similarity=0.038 Sum_probs=0.0
Q ss_pred CCceEEEEeCCchHHHHHHHHHHhcCCCEEEE
Q 009957 218 RPVVGVGCASTGDTSAALSAYCASAGIPSIVF 249 (521)
Q Consensus 218 ~~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~ 249 (521)
+.+..+|..+ |-.|.+.|.++++.|++++||
T Consensus 5 ~~yDVvIIGa-GpAGlsAA~~lar~g~~v~li 35 (304)
T 4fk1_A 5 KYIDCAVIGA-GPAGLNASLVLGRARKQIALF 35 (304)
T ss_dssp -CEEEEEECC-SHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcCEEEECC-CHHHHHHHHHHHHCCCCEEEE
No 281
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=21.73 E-value=1.4e+02 Score=27.75 Aligned_cols=71 Identities=14% Similarity=0.250 Sum_probs=43.1
Q ss_pred eEEEEeCC--chHHHHHHHHHHhcCCCEEEEccCCcCC-HHhHHhHH-hCCCEEEEECCC---HHHHHHHHHHHHhcC
Q 009957 221 VGVGCAST--GDTSAALSAYCASAGIPSIVFLPANKIS-IAQLVQPI-ANGAFVLSIDTD---FDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSS--GN~g~AlAa~aa~~Gi~~~V~vP~~~~s-~~k~~q~~-~~GA~Vi~v~g~---~dd~~~~~~~~~~~~ 291 (521)
..+|+..+ |.-|.++|..-.+.|.+++++.-..... ...+..+. .+|.++..+..| .+++.+.++++.++.
T Consensus 22 ~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (267)
T 3gdg_A 22 VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF 99 (267)
T ss_dssp EEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 56777666 6779999988888899888766443111 22223332 447666666544 445566666665553
No 282
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=21.69 E-value=2.2e+02 Score=27.12 Aligned_cols=70 Identities=10% Similarity=0.108 Sum_probs=41.3
Q ss_pred eEEEEeCCc--hHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCC-CEEEEEC-CCHHHHHHHHHHHHhcC
Q 009957 221 VGVGCASTG--DTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANG-AFVLSID-TDFDGCMKLIREVTSEL 291 (521)
Q Consensus 221 ~~Vv~aSSG--N~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~G-A~Vi~v~-g~~dd~~~~~~~~~~~~ 291 (521)
..+|+..+| .-|.++|..-.+.|.++++..-.. ....++..+ ...| +..+.+| .+.+++.+.++++.++.
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE-TFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467777666 679999988888899877765432 122223322 2223 4445555 34556666776665553
No 283
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.65 E-value=1.4e+02 Score=28.02 Aligned_cols=66 Identities=14% Similarity=0.045 Sum_probs=40.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhH-HhCCCEEEEECC---CHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQP-IANGAFVLSIDT---DFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~-~~~GA~Vi~v~g---~~dd~~~~~~~~~~~ 290 (521)
..+|+..||--|.+++..-.+.|.+++++.- +..++..+ ...+.++..+.. +.++..+.++++.++
T Consensus 8 ~vlITGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (263)
T 2a4k_A 8 TILVTGAASGIGRAALDLFAREGASLVAVDR----EERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE 77 (263)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5788888889999999888888988776632 22333332 233334444443 345555666665444
No 284
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.64 E-value=2.8e+02 Score=25.53 Aligned_cols=66 Identities=12% Similarity=0.061 Sum_probs=39.2
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-.. ...+.. ...+..++.+| .+.++..+.++++.++
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 8 GVLVTGGARGIGRAIAQAFAREGALVALCDLRP--EGKEVA--EAIGGAFFQVDLEDERERVRFVEEAAYA 74 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESST--THHHHH--HHHTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh--hHHHHH--HHhhCCEEEeeCCCHHHHHHHHHHHHHH
Confidence 578888889999999988888898877654322 221111 11112455555 3445555566555443
No 285
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=21.53 E-value=40 Score=26.25 Aligned_cols=27 Identities=22% Similarity=0.144 Sum_probs=20.9
Q ss_pred CCCCCCCCccCCCCceeecCCCCcceecc
Q 009957 83 NAGPDSPEFYSLDEIVYRSRSGGLLDVQH 111 (521)
Q Consensus 83 ~~~~~cg~~~~~~~~~~~c~cGGll~~~~ 111 (521)
+.|..|++.+.+ ..+.|+||+.|=-.+
T Consensus 26 nRC~~CrKkvgL--~gf~CrCg~~FCs~H 52 (74)
T 1wfl_A 26 NRCFMCRKKVGL--TGFDCRCGNLFCGLH 52 (74)
T ss_dssp TBCSSSCCBCGG--GCEECTTSCEECSSS
T ss_pred CcChhhCCcccc--cCeecCCCCEechhc
Confidence 468889998875 358899999886544
No 286
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=21.50 E-value=2.6e+02 Score=26.40 Aligned_cols=83 Identities=13% Similarity=0.049 Sum_probs=48.2
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---ccccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP---IYLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
+++++.-.+ .+-..-..++...|++|+.++-+.+...+..+++.+..+ ++..+-.++ +....+.-++.++++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~~~~g- 84 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDE---ALHEALVELAVRRFG- 84 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCH---HHHHHHHHHHHHHcC-
Confidence 455555443 222233345667899999888877766666666533221 112222233 333455566777777
Q ss_pred CCCcEEEEcCCc
Q 009957 321 EVPDWVIVPGGN 332 (521)
Q Consensus 321 ~~pD~VvVP~G~ 332 (521)
.+|.+|-..|.
T Consensus 85 -~iD~lvnnAg~ 95 (280)
T 3tox_A 85 -GLDTAFNNAGA 95 (280)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 68999988873
No 287
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=21.46 E-value=39 Score=31.63 Aligned_cols=66 Identities=12% Similarity=-0.057 Sum_probs=37.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHh
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTS 289 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~ 289 (521)
..+|+..+|--|.+++....+.|.+++++.-.. ....+...+...|.+++.+ +.++..+.++++.+
T Consensus 3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~ 68 (254)
T 1zmt_A 3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESF-KQKDELEAFAETYPQLKPM--SEQEPAELIEAVTS 68 (254)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGG-GSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHH
Confidence 357777778889999988888898876653221 1222222244446555544 44444444444443
No 288
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=21.40 E-value=1.9e+02 Score=29.72 Aligned_cols=73 Identities=15% Similarity=-0.008 Sum_probs=41.5
Q ss_pred ceEEEEeCCchHHHHHHHHHH-hcCCCEEEEccCCcCCHH------------hHHhHHhCCCEEEEECCC---HHHHHHH
Q 009957 220 VVGVGCASTGDTSAALSAYCA-SAGIPSIVFLPANKISIA------------QLVQPIANGAFVLSIDTD---FDGCMKL 283 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa-~~Gi~~~V~vP~~~~s~~------------k~~q~~~~GA~Vi~v~g~---~dd~~~~ 283 (521)
.+.+|+..|...|.|.|...+ +.|-.++++.=....... -...++..|...+.+.+| -+...+.
T Consensus 51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v 130 (401)
T 4ggo_A 51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV 130 (401)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence 356777776777877775444 678877666522111111 123456677777666654 2345556
Q ss_pred HHHHHhcCC
Q 009957 284 IREVTSELP 292 (521)
Q Consensus 284 ~~~~~~~~~ 292 (521)
++++.++.|
T Consensus 131 i~~i~~~~G 139 (401)
T 4ggo_A 131 IEEAKKKGI 139 (401)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhcC
Confidence 666666654
No 289
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=21.35 E-value=2.3e+02 Score=28.73 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=24.7
Q ss_pred EEEEeCCchHHHHHHHHHHhcCCCEEEEccCC
Q 009957 222 GVGCASTGDTSAALSAYCASAGIPSIVFLPAN 253 (521)
Q Consensus 222 ~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~ 253 (521)
.|+..-+|..|..++..+++.|++++++-|..
T Consensus 37 ~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 37 WLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 34445568889999999999999988886653
No 290
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=21.30 E-value=5.8e+02 Score=25.05 Aligned_cols=35 Identities=17% Similarity=0.146 Sum_probs=20.5
Q ss_pred cEEEEc-CCchhHHHHHHHHHHHHHHcCCCCCCCeEEEeccCC-Cch
Q 009957 324 DWVIVP-GGNLGNIYAFYKGFKMCHELGLVDRMPRLVCTQAAN-ANP 368 (521)
Q Consensus 324 D~VvVP-~G~Gg~l~G~~kgf~~l~~~Gl~~~~prli~Vq~~~-~~~ 368 (521)
+.|+.+ +||-|...+.+ +..+|+ +++.+-|.+ .+.
T Consensus 86 ~~vv~aSsGN~g~alA~~-----a~~~G~-----~~~i~~p~~~~~~ 122 (360)
T 2d1f_A 86 RAVLCASTGNTSASAAAY-----AARAGI-----TCAVLIPQGKIAM 122 (360)
T ss_dssp SEEEECCSSHHHHHHHHH-----HHHHTC-----EEEEEECSSCCCH
T ss_pred CEEEEeCCcHHHHHHHHH-----HHHcCC-----cEEEEEcCCCCCH
Confidence 566665 45665544433 456675 667777776 443
No 291
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=21.21 E-value=1e+02 Score=28.04 Aligned_cols=69 Identities=9% Similarity=0.163 Sum_probs=39.7
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHh-HHhHHhCCCEEEE-ECCC---HHHHHHHHHHHHh
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQ-LVQPIANGAFVLS-IDTD---FDGCMKLIREVTS 289 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k-~~q~~~~GA~Vi~-v~g~---~dd~~~~~~~~~~ 289 (521)
+.+|+..+|.-|.+++..-.+.|.+++++.-.+.....+ ...+...|.++.. +..| .++..+.++++.+
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAE 76 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence 467778888889999988888898887764332111111 1223445554433 4433 4444555555443
No 292
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=21.20 E-value=4.9e+02 Score=24.24 Aligned_cols=83 Identities=14% Similarity=0.141 Sum_probs=47.4
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCCccccCCCChHhHhhHHHHHHHHHHhcCCCCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANSLNSLRLEGQKTAAVEILQQFDWEVP 323 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~p 323 (521)
+++++.-.+ .+-..-..++...|++|+.++-+.+...+...++..+...+..+-.++ +....+.-++.++++ .+
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~g--~i 102 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSA---KDAESMVEKTTAKWG--RV 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCH---HHHHHHHHHHHHHHS--CC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCH---HHHHHHHHHHHHHcC--CC
Confidence 455555543 233333445667899999998776666555555321111222332343 233445566677776 68
Q ss_pred cEEEEcCCc
Q 009957 324 DWVIVPGGN 332 (521)
Q Consensus 324 D~VvVP~G~ 332 (521)
|.+|-..|.
T Consensus 103 D~lv~nAg~ 111 (277)
T 4dqx_A 103 DVLVNNAGF 111 (277)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCc
Confidence 999988874
No 293
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=21.18 E-value=3.3e+02 Score=25.00 Aligned_cols=30 Identities=13% Similarity=0.097 Sum_probs=21.9
Q ss_pred eEEEEeCCc-hHHHHHHHHHHhcCCCEEEEc
Q 009957 221 VGVGCASTG-DTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 221 ~~Vv~aSSG-N~g~AlAa~aa~~Gi~~~V~v 250 (521)
..+|+..+| .-|.+++..-.+.|.+++++.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~ 54 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISD 54 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEec
Confidence 456666666 479999987778898866653
No 294
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=21.12 E-value=1.7e+02 Score=27.85 Aligned_cols=54 Identities=9% Similarity=0.052 Sum_probs=35.0
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCC--cCCHHhHH---hHHhCCCEEEEEC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPAN--KISIAQLV---QPIANGAFVLSID 274 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~--~~s~~k~~---q~~~~GA~Vi~v~ 274 (521)
+.+|+..||..|.+++......|.+++++.-.. ...+.+.. .+...|++++..|
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D 64 (321)
T 3c1o_A 6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64 (321)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEec
Confidence 467888889999999977777898888876431 11122322 2345677776554
No 295
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=21.06 E-value=1.8e+02 Score=27.28 Aligned_cols=54 Identities=15% Similarity=0.082 Sum_probs=35.4
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCC--cCCH-HhHH---hHHhCCCEEEEEC
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPAN--KISI-AQLV---QPIANGAFVLSID 274 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~--~~s~-~k~~---q~~~~GA~Vi~v~ 274 (521)
+.+|+..||..|.+++......|.+++++.-.. ...+ .+.. .+...|++++..|
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D 63 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeC
Confidence 467888889999999977777898888876331 1112 2322 2345688776554
No 296
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=20.96 E-value=2.6e+02 Score=25.33 Aligned_cols=83 Identities=16% Similarity=0.038 Sum_probs=45.9
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---ccccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP---IYLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
+.+++.-.+ .+-..-..++...|++|+.+.-+.+...+...++.+... ++..+-.++ +....+.-++.++.+
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~~- 81 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDI---ESIQNFFAEIKAENL- 81 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCH---HHHHHHHHHHHHTTC-
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH---HHHHHHHHHHHHHcC-
Confidence 345555443 222222344667899999888777666655555543221 122222233 333455556666665
Q ss_pred CCCcEEEEcCCc
Q 009957 321 EVPDWVIVPGGN 332 (521)
Q Consensus 321 ~~pD~VvVP~G~ 332 (521)
.+|.||...|.
T Consensus 82 -~id~li~~Ag~ 92 (247)
T 3lyl_A 82 -AIDILVNNAGI 92 (247)
T ss_dssp -CCSEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 68998888764
No 297
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=20.95 E-value=2.9e+02 Score=25.62 Aligned_cols=61 Identities=15% Similarity=0.062 Sum_probs=39.5
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|.-|.+++..-.+.|.+++++.-.. . + ...+..+.+| .+.++..+.++++.++
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~--~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 71 (264)
T 2dtx_A 10 VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD--P--G-----EAKYDHIECDVTNPDQVKASIDHIFKE 71 (264)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSC--C--C-----SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCc--c--c-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 578888889999999988888899877765332 1 1 1234555555 3455555666655544
No 298
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=20.95 E-value=4e+02 Score=26.67 Aligned_cols=108 Identities=15% Similarity=0.143 Sum_probs=58.5
Q ss_pred EEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEEEECCCHHHH---HHHHH-------------
Q 009957 222 GVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTDFDGC---MKLIR------------- 285 (521)
Q Consensus 222 ~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi~v~g~~dd~---~~~~~------------- 285 (521)
.|+...+|-.|..++..+++.|++++++- ....+..+... .... +.++++|. .+.++
T Consensus 26 ~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad----~~~~--~~~~~~d~~~l~~~a~~~d~i~~e~e~~~ 98 (403)
T 3k5i_A 26 KVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISA----HDGH--VTGSFKEREAVRQLAKTCDVVTAEIEHVD 98 (403)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCC----SSCC--EESCTTCHHHHHHHHTTCSEEEESSSCSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhcc----ccce--eecCCCCHHHHHHHHHhCCEEEECCCCCC
Confidence 45555668899999999999999999887 32222222111 0011 11222221 11111
Q ss_pred ----HHHhcCCccccCCCChHhHhhHHHHHHHHHHhcCCCCCcEEEEcCCchhHHH
Q 009957 286 ----EVTSELPIYLANSLNSLRLEGQKTAAVEILQQFDWEVPDWVIVPGGNLGNIY 337 (521)
Q Consensus 286 ----~~~~~~~~~~~ns~Np~~i~G~~T~a~EI~eQl~~~~pD~VvVP~G~Gg~l~ 337 (521)
+..++ +....++.....+..-|....+++++.+-..|.+.++..++...+.
T Consensus 99 ~~~l~~l~~-g~~v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~ 153 (403)
T 3k5i_A 99 TYALEEVAS-EVKIEPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRELVENTPAELA 153 (403)
T ss_dssp HHHHHHHTT-TSEESSCHHHHHHHTSHHHHHHHHHTTTCCBCCEEEESSCCHHHHH
T ss_pred HHHHHHHHc-CCccCcCHHHHHHhcCHHHHHHHHHHCCcCCCCEEEEcCCCHHHHH
Confidence 11222 3322233334456667778888888877556777777644444443
No 299
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=20.81 E-value=85 Score=30.84 Aligned_cols=47 Identities=17% Similarity=0.072 Sum_probs=33.5
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEE
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVL 271 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 271 (521)
..++.+.+|..|.+++..++..|.+++++... +.++..++.+|++.+
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~----~~~~~~~~~~Ga~~~ 213 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVRR----DEQIALLKDIGAAHV 213 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEESC----GGGHHHHHHHTCSEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHcCCCEE
Confidence 34555567888999999999999977666543 346666777888654
No 300
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=20.80 E-value=1.5e+02 Score=29.21 Aligned_cols=51 Identities=16% Similarity=0.028 Sum_probs=34.8
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEEE
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVL 271 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~Vi 271 (521)
+.+|.+.+|..|.+...+|+..|.++++.+....-...++..++.+||+.+
T Consensus 170 ~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v 220 (357)
T 1zsy_A 170 SVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV 220 (357)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE
T ss_pred EEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE
Confidence 444445558889988889999999887777443112335566778898654
No 301
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=20.80 E-value=3.7e+02 Score=24.76 Aligned_cols=83 Identities=11% Similarity=0.032 Sum_probs=49.0
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---ccccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP---IYLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
+++++.-.+ .+-..-..++...|++|+.++-+.+...+..+++.+... ++..+-.++ +....+.-++.++++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~~~~g- 87 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDD---AQVAHLVDETMKAYG- 87 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH---HHHHHHHHHHHHHTS-
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH---HHHHHHHHHHHHHcC-
Confidence 455555443 233333445667899999988887777666666544322 122222233 334455667777776
Q ss_pred CCCcEEEEcCCc
Q 009957 321 EVPDWVIVPGGN 332 (521)
Q Consensus 321 ~~pD~VvVP~G~ 332 (521)
.+|.+|-..|.
T Consensus 88 -~id~lv~nAg~ 98 (264)
T 3ucx_A 88 -RVDVVINNAFR 98 (264)
T ss_dssp -CCSEEEECCCS
T ss_pred -CCcEEEECCCC
Confidence 68988887653
No 302
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=20.69 E-value=2.4e+02 Score=24.67 Aligned_cols=47 Identities=15% Similarity=-0.089 Sum_probs=30.6
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEE
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFV 270 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~V 270 (521)
...++.+.+|..|.+++..++..|.+++++.. ++.++..++.+|+..
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~----~~~~~~~~~~~g~~~ 86 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAG----SDAKREMLSRLGVEY 86 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEES----SHHHHHHHHTTCCSE
T ss_pred CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHcCCCE
Confidence 34455555788899999888888987665533 334555555667643
No 303
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=20.49 E-value=2e+02 Score=26.64 Aligned_cols=83 Identities=16% Similarity=0.094 Sum_probs=46.9
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---ccccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP---IYLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
+++++.-.+ .+-..-..++...|++|+.++-+.+...+..+++.+..+ ++..+-.++ +....+.-++.++++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~g- 88 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDE---QHREAVIKAALDQFG- 88 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCH---HHHHHHHHHHHHHcC-
Confidence 355555443 222222344566799999888777666666665543222 122222233 333455566777776
Q ss_pred CCCcEEEEcCCc
Q 009957 321 EVPDWVIVPGGN 332 (521)
Q Consensus 321 ~~pD~VvVP~G~ 332 (521)
.+|.+|-..|.
T Consensus 89 -~id~lv~nAg~ 99 (256)
T 3gaf_A 89 -KITVLVNNAGG 99 (256)
T ss_dssp -CCCEEEECCCC
T ss_pred -CCCEEEECCCC
Confidence 68998888764
No 304
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=20.39 E-value=3e+02 Score=25.10 Aligned_cols=66 Identities=9% Similarity=-0.069 Sum_probs=40.9
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhC--CCEEEEEC-CCHHHHHHHHHHHHhc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIAN--GAFVLSID-TDFDGCMKLIREVTSE 290 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~--GA~Vi~v~-g~~dd~~~~~~~~~~~ 290 (521)
..+|+..+|--|.++|..-.+.|.+++++-- +..+...+... +...+.+| .+.+++.+.++++.++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 72 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDI----DEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHH
Confidence 4688888888899999888888988776532 23344444332 23334444 3455566666666554
No 305
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=20.31 E-value=1.5e+02 Score=27.95 Aligned_cols=30 Identities=10% Similarity=0.027 Sum_probs=23.9
Q ss_pred eEEEEeCCchHHHHHHHHHHhcCCCEEEEc
Q 009957 221 VGVGCASTGDTSAALSAYCASAGIPSIVFL 250 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~v 250 (521)
..+|+..||--|.+++......|.+++++.
T Consensus 30 ~vlITGasggIG~~la~~l~~~G~~V~~~~ 59 (286)
T 1xu9_A 30 KVIVTGASKGIGREMAYHLAKMGAHVVVTA 59 (286)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 567888888889999987778898876654
No 306
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=20.23 E-value=1.6e+02 Score=26.22 Aligned_cols=55 Identities=13% Similarity=0.128 Sum_probs=34.8
Q ss_pred eEEEEeCCchHHHHHHHHHH-hcCCCEEEEccCCcCCHH-hHHhHHhCCCEEEEECCCHHH
Q 009957 221 VGVGCASTGDTSAALSAYCA-SAGIPSIVFLPANKISIA-QLVQPIANGAFVLSIDTDFDG 279 (521)
Q Consensus 221 ~~Vv~aSSGN~g~AlAa~aa-~~Gi~~~V~vP~~~~s~~-k~~q~~~~GA~Vi~v~g~~dd 279 (521)
+.+|+..||..|.+++.... ..|.+++++.-. +. ++..+...+..+..+.+|..|
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~d 63 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQ----LKTRIPPEIIDHERVTVIEGSFQN 63 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS----HHHHSCHHHHTSTTEEEEECCTTC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC----ccccchhhccCCCceEEEECCCCC
Confidence 36788888999999997776 899988776532 23 333332234444445555443
No 307
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=20.19 E-value=3.5e+02 Score=26.42 Aligned_cols=47 Identities=13% Similarity=0.037 Sum_probs=33.2
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCCEE
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFV 270 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA~V 270 (521)
...++.+.+|..|.+++..++..|.+++++.. ++.++..++.+|+..
T Consensus 172 ~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~----~~~~~~~~~~~ga~~ 218 (351)
T 1yb5_A 172 ESVLVHGASGGVGLAACQIARAYGLKILGTAG----TEEGQKIVLQNGAHE 218 (351)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----ChhHHHHHHHcCCCE
Confidence 45566676789999999999999987665443 344666666777754
No 308
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=20.18 E-value=1.5e+02 Score=30.57 Aligned_cols=70 Identities=20% Similarity=0.191 Sum_probs=44.3
Q ss_pred ceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHh-HHhCCCEEEEEC-CCHHHHHHHHHHHHhcC
Q 009957 220 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQ-PIANGAFVLSID-TDFDGCMKLIREVTSEL 291 (521)
Q Consensus 220 ~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q-~~~~GA~Vi~v~-g~~dd~~~~~~~~~~~~ 291 (521)
...+|+..+|--|.++|..-.+.|.+++++--.. ...++.. ....+++++.+| .+.++..+.++++.++.
T Consensus 214 k~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~--~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDG--AAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG--GHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc--cHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 3567877778889999977677799866653221 2223222 345678887777 44556666666665554
No 309
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=20.07 E-value=2.2e+02 Score=26.30 Aligned_cols=82 Identities=11% Similarity=0.047 Sum_probs=46.8
Q ss_pred CEEEEccCC-cCCHHhHHhHHhCCCEEEEECCCHHHHHHHHHHHHhcCC---ccccCCCChHhHhhHHHHHHHHHHhcCC
Q 009957 245 PSIVFLPAN-KISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELP---IYLANSLNSLRLEGQKTAAVEILQQFDW 320 (521)
Q Consensus 245 ~~~V~vP~~-~~s~~k~~q~~~~GA~Vi~v~g~~dd~~~~~~~~~~~~~---~~~~ns~Np~~i~G~~T~a~EI~eQl~~ 320 (521)
+++++.-.+ .+-..-..++...|++|+.++-+.+...+...++.+..+ ++..+-.++ +....+.-++.++++
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~~~~g- 82 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNT---DDIQKMIEQIDEKFG- 82 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCH---HHHHHHHHHHHHHHS-
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH---HHHHHHHHHHHHHcC-
Confidence 455555443 222223344667899999988877766666555532211 122222233 333455566777776
Q ss_pred CCCcEEEEcCC
Q 009957 321 EVPDWVIVPGG 331 (521)
Q Consensus 321 ~~pD~VvVP~G 331 (521)
.+|.+|...|
T Consensus 83 -~id~lv~nAg 92 (257)
T 3imf_A 83 -RIDILINNAA 92 (257)
T ss_dssp -CCCEEEECCC
T ss_pred -CCCEEEECCC
Confidence 6899888876
No 310
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=20.04 E-value=42 Score=25.06 Aligned_cols=24 Identities=21% Similarity=0.328 Sum_probs=16.6
Q ss_pred CCCCCCCccCCCCceeecC-CCCcceecc
Q 009957 84 AGPDSPEFYSLDEIVYRSR-SGGLLDVQH 111 (521)
Q Consensus 84 ~~~~cg~~~~~~~~~~~c~-cGGll~~~~ 111 (521)
.|+.|| .|++.+ .|+ ||+.....+
T Consensus 8 ~C~~Cg-vYTLk~---~CP~CG~~T~~~h 32 (60)
T 2apo_B 8 KCPKCG-LYTLKE---ICPKCGEKTVIPK 32 (60)
T ss_dssp ECTTTC-CEESSS---BCSSSCSBCBCCC
T ss_pred eCCCCC-CEeccc---cCcCCCCcCCCCC
Confidence 799995 455532 496 999987644
No 311
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=20.02 E-value=97 Score=29.47 Aligned_cols=75 Identities=11% Similarity=0.050 Sum_probs=0.0
Q ss_pred CCceEEEEeCCchHHHHHHHHHHhcCCCEEEEccCCcCCHHhHHhHHhCCC---EEEEEC-CCHHHHHHHHHHHHhcCC
Q 009957 218 RPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGA---FVLSID-TDFDGCMKLIREVTSELP 292 (521)
Q Consensus 218 ~~~~~Vv~aSSGN~g~AlAa~aa~~Gi~~~V~vP~~~~s~~k~~q~~~~GA---~Vi~v~-g~~dd~~~~~~~~~~~~~ 292 (521)
.+...+|+..+|--|.++|..-...|.+++++.-.......-...+...+. ..+.+| .+.+++.+.++++.++.+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Done!