BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009960
(521 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 144/504 (28%), Positives = 228/504 (45%), Gaps = 57/504 (11%)
Query: 2 FPGPLINSTTNDFVHVNVFNNLD-EPLLFTWNGIQQRLNSWQDGVSG-TNCPILPRKNWT 59
FPGP I + D V V + N L E ++ W+GI QR W DG + + C I P + +
Sbjct: 31 FPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFF 90
Query: 60 YVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDD 119
Y F V D G+FFY + Q++ G +G + V+ PF + E +LL+ DW++
Sbjct: 91 YNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQS 148
Query: 120 YKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTRE-----------------PESFTV 162
K ++ + P IL+NG+G F + + P F V
Sbjct: 149 IHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHV 208
Query: 163 TKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTA 222
+ TYR RI++ ++ + NF I NH++++VE +G+Y +D++ G+SYSVL+T
Sbjct: 209 SPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITT 268
Query: 223 DQNEAD-YYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQA 281
DQN ++ Y++ + N L L L S SK T P P P D D ++
Sbjct: 269 DQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLP-TSPPPQTPAWDDFD----RS 323
Query: 282 KSVRWNLTAGAARPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETP- 340
K+ + +TA P P FN + L ++ I+G+ ++ IN+VS TP
Sbjct: 324 KNFTYRITAAMGSPKPPVKFN-------RRIFLLNTQNVINGYVKWAINDVSLALPPTPY 376
Query: 341 LKLADYFVNGS-----------GVYQLDWFPTNSVNDEATR-GVSVVTGNHKGWIELVFN 388
L Y + + Y +D PTN E TR G V ++++
Sbjct: 377 LGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTN----EKTRIGNGVYQFKIGEVVDVILQ 432
Query: 389 N------NLDVIDSWHLDXXXXXXXXXXXXEWAPESRSTYNLFDPVVRSTVQVYPGGWTA 442
N NL WHL +++ E S+ NL +P +R+TV ++P GWTA
Sbjct: 433 NANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTA 492
Query: 443 VYAFLDNPGMWNLRSQLLQNWFLG 466
+ DNPG+W + + +G
Sbjct: 493 IRFVADNPGVWAFHCHIEPHLHMG 516
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 183/461 (39%), Gaps = 56/461 (12%)
Query: 4 GPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILPRKN 57
GPLI ND +NV N+LD P + W+G+ QR +W DG G N CPI P
Sbjct: 33 GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHA 92
Query: 58 WTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRV-NNRIVISVPFPKPEAEFDLLIGDWF 116
+ Y F G+F+Y Q G GP+ + ++ + + + + + + DW+
Sbjct: 93 FLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWY 152
Query: 117 YDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVG 176
+ + A PD L+NGKG + E V +G YR R+ ++
Sbjct: 153 HIPAPSIQGAAQ---------PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLS 203
Query: 177 SVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIVASPK 236
++ F I H++ ++E +G T T+ L + GQ YS ++ A+Q +Y+I A P
Sbjct: 204 CDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPN 263
Query: 237 LISTNDS---SNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAA 293
+ +N V +L Y+ + + P+P L N+A A
Sbjct: 264 KGRNGLAGTFANGVNSAILRYAGA-ANADPTTSANPNPAQL----NEADLHALIDPAAPG 318
Query: 294 RPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGV 353
P P ++V L G + I+G + + L + + + A+ + V
Sbjct: 319 IPTP----GAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSV 374
Query: 354 YQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFNNNLDVIDSWHLDXXXXXXXXXXXXE 413
Y+L P N V E V+ G H + + V+ S
Sbjct: 375 YEL---PRNQVV-ELVVPAGVLGGPHPFHLH---GHAFSVVRS----------------- 410
Query: 414 WAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFL-DNPGMW 453
STYN +PV R V + G F+ DNPG W
Sbjct: 411 ---AGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPW 448
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 183/461 (39%), Gaps = 56/461 (12%)
Query: 4 GPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILPRKN 57
GPLI ND +NV N+LD P + W+G+ QR +W DG G N CPI P
Sbjct: 33 GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHA 92
Query: 58 WTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRV-NNRIVISVPFPKPEAEFDLLIGDWF 116
+ Y F G+F+Y Q G GP+ + ++ + + + + + + DW+
Sbjct: 93 FLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWY 152
Query: 117 YDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVG 176
+ + A PD L+NGKG + E V +G YR R+ ++
Sbjct: 153 HIPAPSIQGAAQ---------PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLS 203
Query: 177 SVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIVASPK 236
++ F I H++ ++E +G T T+ L + GQ YS ++ A+Q +Y+I A P
Sbjct: 204 CDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPN 263
Query: 237 LISTNDS---SNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAA 293
+ +N V +L Y+ + + P+P L N+A A
Sbjct: 264 KGRNGLAGTFANGVNSAILRYAGA-ANADPTTSANPNPAQL----NEADLHALIDPAAPG 318
Query: 294 RPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGV 353
P P ++V L G + I+G + + L + + + A+ + V
Sbjct: 319 IPTP----GAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSV 374
Query: 354 YQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFNNNLDVIDSWHLDXXXXXXXXXXXXE 413
Y+L P N V E V+ G H + + V+ S
Sbjct: 375 YEL---PRNQVV-ELVVPAGVLGGPHPFHLH---GHAFSVVRS----------------- 410
Query: 414 WAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFL-DNPGMW 453
STYN +PV R V + G F+ DNPG W
Sbjct: 411 ---AGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPW 448
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 190/513 (37%), Gaps = 88/513 (17%)
Query: 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILP 54
+FP PLI D +NV +N+ + W+G Q +W DG + N CPI
Sbjct: 30 VFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCPIST 89
Query: 55 RKNWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD----- 109
+ Y FQV DQ G+F+Y ++ Q G GPI V+ P + +D
Sbjct: 90 GHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPI------VVYDPNDPHASLYDVDDDS 143
Query: 110 --LLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMT 167
+ + DW++ K + D L+NG G + + TVTKG
Sbjct: 144 TVITLADWYHLAAKVGAPVPTA---------DATLINGLGRSAATLAADLAVITVTKGKR 194
Query: 168 YRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEA 227
YRFR+ ++ ++ F I H + ++E + T+ SL + Q YS ++ ADQ+
Sbjct: 195 YRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVD 254
Query: 228 DYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWN 287
+Y+I A P T + + +L Y G P+ P + +S
Sbjct: 255 NYWIRALPN-SGTQNFAGGTNSAILRYD-------GAAPVEPTTSQTPSTNPLVESALTT 306
Query: 288 L--TAGAARPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKL-- 343
L TA P P G ++ L+ F G + IN S+ P+ L
Sbjct: 307 LKGTAAPGSPTPGGV----DLALNMAFGFAGGN--------FTINGASFTPPTVPVLLQI 354
Query: 344 -------ADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFNNNLDVIDS 396
AD GS VY L P N+ + + + G
Sbjct: 355 LSGAQSAADLLPAGS-VYSL---PANADIEISLPATAAAPG---------------FPHP 395
Query: 397 WHLDXXXXXXXXXXXXEWAPESRSTYNLFDPVVRSTVQV-YPGGWTAVYAFLDNPGMWNL 455
+HL STYN +PV R V PG + DNPG W L
Sbjct: 396 FHLHGHVFAVVRS-------AGSSTYNYANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFL 448
Query: 456 RSQLLQNWFLGQELYIRVHNSDPNPAKERPPPE 488
+ ++ L + + P+ A P P+
Sbjct: 449 HCHI--DFHLEAGFAVVMAEDIPDVAATNPVPQ 479
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 190/513 (37%), Gaps = 88/513 (17%)
Query: 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILP 54
+FP PLI D +NV +N+ + W+G Q +W DG + N CPI
Sbjct: 30 VFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCPIST 89
Query: 55 RKNWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD----- 109
+ Y FQV DQ G+F+Y ++ Q G GPI V+ P + +D
Sbjct: 90 GHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPI------VVYDPNDPHASLYDVDDDS 143
Query: 110 --LLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMT 167
+ + DW++ K + D L+NG G + + TVTKG
Sbjct: 144 TVITLADWYHLAAKVGAPVPTA---------DATLINGLGRSAATLAADLAVITVTKGKR 194
Query: 168 YRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEA 227
YRFR+ ++ ++ F I H + ++E + T+ SL + Q YS ++ ADQ+
Sbjct: 195 YRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVD 254
Query: 228 DYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWN 287
+Y+I A P T + + +L Y G P+ P + +S
Sbjct: 255 NYWIRALPN-SGTQNFAGGTNSAILRYD-------GAAPVEPTTSQTPSTNPLVESALTT 306
Query: 288 L--TAGAARPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKL-- 343
L TA P P G ++ L+ F G + IN S+ P+ L
Sbjct: 307 LKGTAAPGSPTPGGV----DLALNMAFGFAGGN--------FTINGASFTPPTVPVLLQI 354
Query: 344 -------ADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFNNNLDVIDS 396
AD GS VY L P N+ + + + G
Sbjct: 355 LSGAQSAADLLPAGS-VYSL---PANADIEISLPATAAAPG---------------FPHP 395
Query: 397 WHLDXXXXXXXXXXXXEWAPESRSTYNLFDPVVRSTVQV-YPGGWTAVYAFLDNPGMWNL 455
+HL STYN +PV R V PG + DNPG W L
Sbjct: 396 FHLHGHVFAVVRS-------AGSSTYNYANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFL 448
Query: 456 RSQLLQNWFLGQELYIRVHNSDPNPAKERPPPE 488
+ ++ L + + P+ A P P+
Sbjct: 449 HCHI--DFHLEAGFAVVMAEDIPDVAATNPVPQ 479
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 22/268 (8%)
Query: 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILP 54
+FPGPLI D +NV +NL + W+G+ Q +W DG + N CPI
Sbjct: 30 VFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGLFQHGTNWADGPAFVNQCPIAS 89
Query: 55 RKNWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD----L 110
++ Y F V DQ G+F+Y ++ Q G GP+ V + S P+ D +
Sbjct: 90 GNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDP---SDPYASMYDVDDDTTVI 146
Query: 111 LIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRF 170
+ DW++ K A+ D +L+NG G F + TV + YRF
Sbjct: 147 TLSDWYHTAAKLGP--------AFPPNADSVLINGLGRFAGGNASDLAVITVEQNKRYRF 198
Query: 171 RISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYY 230
R+ ++ +F F I H M ++E +G + + S+ + Q YS ++ A Q+ +Y+
Sbjct: 199 RLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQRYSFVLNATQSVDNYW 258
Query: 231 IVASPKLISTNDSSNLVGLGVLHYSNSK 258
I A P T D++ + +L YS +
Sbjct: 259 IRAIPN-TGTIDTTGGLNSAILRYSGAD 285
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 27/248 (10%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILPRK 56
PGPL+ D +NV +NL + W+G Q+ +W DG + N CPI P
Sbjct: 32 PGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPAFINQCPISPGH 91
Query: 57 NWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD------- 109
++ Y FQV +Q G+F+Y ++ Q G GP V+ P + +D
Sbjct: 92 SFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPF------VVYDPNDPHASRYDVDNDDTV 145
Query: 110 LLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYR 169
+ + DW++ K + A D L+NGKG + E VTKG R
Sbjct: 146 ITLADWYHTAAKLGPR--------FPAGADATLINGKGRAPSDTSAELSVIKVTKGKRXR 197
Query: 170 FRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADY 229
FR+ ++ +F F I H + ++E + S + +++ S+ + Q YS ++ A+Q +Y
Sbjct: 198 FRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNANQAVDNY 257
Query: 230 YIVASPKL 237
+I A+P
Sbjct: 258 WIRANPNF 265
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 192/508 (37%), Gaps = 78/508 (15%)
Query: 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILP 54
+FP PLI D +NV +N+ + W+G Q +W DG + N CPI
Sbjct: 30 VFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCPIST 89
Query: 55 RKNWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD----- 109
+ Y FQV DQ G+F+Y ++ Q G GPI V+ P ++ +D
Sbjct: 90 GHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPI------VVYDPQDPHKSLYDVDDDS 143
Query: 110 --LLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMT 167
+ + DW++ K + D L+NG G + + TVTKG
Sbjct: 144 TVITLADWYHLAAKVGSPVPTA---------DATLINGLGRSIDTLNADLAVITVTKGKR 194
Query: 168 YRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEA 227
YRFR+ ++ + F I H + ++E + T+ S+ + Q YS ++ ADQ+
Sbjct: 195 YRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYSFVLNADQDVG 254
Query: 228 DYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWN 287
+Y+I A P T + V +L Y G P+ P + +S
Sbjct: 255 NYWIRALPN-SGTRNFDGGVNSAILRYD-------GAAPVEPTTSQTPSTNPLVESALTT 306
Query: 288 L--TAGAARPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLAD 345
L TA P P G ++ L+ F G K + IN S+ P+ L
Sbjct: 307 LEGTAAPGSPAPGGV----DLALNMAFGFAGGK--------FTINGASFTPPTVPVLL-- 352
Query: 346 YFVNGSGVYQLDWFPTNSVND-EATRGVSV---VTGNHKGWIELVFNNNLDVIDSWHLDX 401
++G+ Q D P+ SV A + + T G+ +HL
Sbjct: 353 QILSGAQSAQ-DLLPSGSVYSLPANADIEISLPATAAAPGFPH-----------PFHLHG 400
Query: 402 XXXXXXXXXXXEWAPESRSTYNLFDPVVRSTVQV-YPGGWTAVYAFLDNPGMWNLRSQLL 460
STYN +PV R V PG + DNPG W L +
Sbjct: 401 HTFAVVRS-------AGSSTYNYENPVYRDVVSTGSPGDNVTIRFRTDNPGPWFLHCHI- 452
Query: 461 QNWFLGQELYIRVHNSDPNPAKERPPPE 488
++ L + + P A P P+
Sbjct: 453 -DFHLEAGFAVVMAEDIPEVAATNPVPQ 479
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 16/265 (6%)
Query: 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILP 54
+FP PLI D +N+ N + + W+G Q+ +W DG + N CPI
Sbjct: 30 VFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAFINQCPIAS 89
Query: 55 RKNWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLL-IG 113
++ Y FQV Q G+F+Y ++ Q G GP V + + E ++ +
Sbjct: 90 GNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHANLYDVDDESTVITLA 149
Query: 114 DWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRIS 173
DW++ K + D L+NG G T + +VTKG YRFR+
Sbjct: 150 DWYHVAAKLGPRFPKGA--------DSTLINGLGRSTSTPTADLAVISVTKGKRYRFRLV 201
Query: 174 NVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIVA 233
++ ++ F I +H++ ++E +G T +T+ S+ + Q YS ++ A+Q+ +Y+I A
Sbjct: 202 SLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQDVDNYWIRA 261
Query: 234 SPKLISTNDSSNLVGLGVLHYSNSK 258
+P T ++ V +L Y ++
Sbjct: 262 NPNF-GTTGFADGVNSAILRYDDAD 285
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 114/249 (45%), Gaps = 29/249 (11%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILPRK 56
PGPLI D +NV +NL + W+G Q+ +W DG + N CPI
Sbjct: 32 PGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPAFINQCPISSGH 91
Query: 57 NWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEF------DL 110
++ Y FQV DQ G+F+Y ++ Q G GP V + P A+ D
Sbjct: 92 SFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDP-------NDPAADLYDVDNDDT 144
Query: 111 LIG--DWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTY 168
+I DW++ +A A+ D L+NGKG T + +VT G Y
Sbjct: 145 VITLVDWYH--------VAAKLGPAFPLGADATLINGKGRSPSTTTADLSVISVTPGKRY 196
Query: 169 RFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEAD 228
RFR+ ++ ++ F I H M ++ET+ T + + S+ + Q YS ++ A+Q +
Sbjct: 197 RFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQAVDN 256
Query: 229 YYIVASPKL 237
Y+I A+P
Sbjct: 257 YWIRANPNF 265
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 27/248 (10%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILPRK 56
PGPL+ D +NV +NL + W+G Q +W DG + N CPI P
Sbjct: 32 PGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGH 91
Query: 57 NWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD------- 109
++ Y FQV DQ G+F+Y ++ Q G GP V+ P + +D
Sbjct: 92 SFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPF------VVYDPNDPHASRYDVDNDDTV 145
Query: 110 LLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYR 169
+ + DW++ K + D L+NGKG E VTKG YR
Sbjct: 146 ITLADWYHTAAKLGPRFPGGA--------DATLINGKGRAPSDSVAELSVIKVTKGKRYR 197
Query: 170 FRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADY 229
FR+ ++ + F I H + ++E + + + + S+ + Q YS ++ A+Q +Y
Sbjct: 198 FRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNY 257
Query: 230 YIVASPKL 237
+I A+P
Sbjct: 258 WIRANPNF 265
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 27/248 (10%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILPRK 56
PGPL+ D +NV +NL + W+G Q +W DG + N CPI P
Sbjct: 32 PGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGH 91
Query: 57 NWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD------- 109
++ Y FQV DQ G+F+Y ++ Q G GP V+ P + +D
Sbjct: 92 SFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPF------VVYDPNDPHASRYDVDNDDTV 145
Query: 110 LLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYR 169
+ + DW++ K + D L+NGKG E VTKG YR
Sbjct: 146 ITLADWYHTAAKLGPRFPGGA--------DATLINGKGRAPSDSVAELSVIKVTKGKRYR 197
Query: 170 FRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADY 229
FR+ ++ + F I H + ++E + + + + S+ + Q YS ++ A+Q +Y
Sbjct: 198 FRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNY 257
Query: 230 YIVASPKL 237
+I A+P
Sbjct: 258 WIRANPNF 265
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 120/281 (42%), Gaps = 24/281 (8%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDE-PLLFTWNGIQQRLNSWQDGVSG-TNCPILPRKNWTY 60
PGP I + D + ++V NNL+ W+GI+Q + DGV G T CPI P TY
Sbjct: 96 PGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTY 155
Query: 61 VFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDY 120
FQV Q G+ +Y + Q G FGP+ +N A++D +G F D+
Sbjct: 156 KFQVT-QYGTTWYHSHFSLQYGDGLFGPLIING---------PATADYDEDVGVIFLQDW 205
Query: 121 KKTRSMANTSLTAYNAIPDV--ILMNGKGPFGYQMTREPES--------FTVTKGMTYRF 170
A P + LMNG F + +P T +G YR
Sbjct: 206 AHESVFEIWDTARLGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRL 265
Query: 171 RISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYY 230
R+ NVG F F I NH + ++ + T +L + +GQ Y V+V A+ +Y+
Sbjct: 266 RLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYW 325
Query: 231 IVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDP 271
I + + ++ G+L Y +S + P +G P
Sbjct: 326 IRGNWGTTCSTNNEAANATGILRYDSSS--IANPTSVGTTP 364
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 417 ESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWNLRSQLLQNWFLGQELYIR 472
ES + +NL +P R + G+ A+ LDNPG W L + W + L ++
Sbjct: 486 ESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIA--WHASEGLAMQ 539
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 120/281 (42%), Gaps = 24/281 (8%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDE-PLLFTWNGIQQRLNSWQDGVSG-TNCPILPRKNWTY 60
PGP I + D + ++V NNL+ W+GI+Q + DGV G T CPI P TY
Sbjct: 96 PGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTY 155
Query: 61 VFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDY 120
FQV Q G+ +Y + Q G FGP+ +N A++D +G F D+
Sbjct: 156 KFQVT-QYGTTWYHSHFSLQYGDGLFGPLIING---------PATADYDEDVGVIFLQDW 205
Query: 121 KKTRSMANTSLTAYNAIPDV--ILMNGKGPFGYQMTREPES--------FTVTKGMTYRF 170
A P + LMNG F + +P T +G YR
Sbjct: 206 AHESVFEIWDTARLGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRL 265
Query: 171 RISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYY 230
R+ NVG F F I NH + ++ + T +L + +GQ Y V+V A+ +Y+
Sbjct: 266 RLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYW 325
Query: 231 IVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDP 271
I + + ++ G+L Y +S + P +G P
Sbjct: 326 IRGNWGTTCSTNNEAANATGILRYDSSS--IANPTSVGTTP 364
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 417 ESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWNLRSQL 459
ES + +NL +P R + G+ A+ LDNPG W L +
Sbjct: 486 ESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHI 528
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 195/502 (38%), Gaps = 66/502 (13%)
Query: 2 FPGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSG-TNCPILPR 55
FPGP+I D + FN L E + W+G Q+ +W DG + T CPI+
Sbjct: 32 FPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVG 91
Query: 56 KNWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLL-IGD 114
+++Y F V G+++Y + Q G GP V + + + ++ + D
Sbjct: 92 NSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLAD 151
Query: 115 WFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPES-FTVTKGMTYRFRIS 173
W++ K+ A ++TA D L++G G + P S TV G YR R+
Sbjct: 152 WYHVLAKEMG--AGGAITA-----DSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLV 204
Query: 174 NVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIVA 233
++ +++F I H M ++ET+G + ++T+ + + Q YS ++ A+Q +Y+I A
Sbjct: 205 SISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRA 264
Query: 234 SPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWN---LTA 290
+P + +L Y + + DP + +++ + + L+
Sbjct: 265 NPNS-GGEGFDGGINSAILRYDGATTA---------DPVTVASTVHTKCLIETDLHPLSR 314
Query: 291 GAARPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNG 350
NP N+ LS F +VIN VS+ P+ L +G
Sbjct: 315 NGVPGNPHQGGADCNLNLSLGFACG----------NFVINGVSFTPPTVPVLLQ--ICSG 362
Query: 351 SGVYQLDWFPTNSV---NDEATRGVSVVTGNHKGWIELVFNNNLDVIDSWHLDXXXXXXX 407
+ D P+ SV +T +++ G G +HL
Sbjct: 363 ANT-AADLLPSGSVISLPSNSTIEIALPAGAAGG------------PHPFHLHGHDFAVS 409
Query: 408 XXXXXEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFL-DNPGMWNLRSQLLQNWFLG 466
S ST N DP+ R V + G F DNPG W L + +W L
Sbjct: 410 ES-------ASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHI--DWHLD 460
Query: 467 QELYIRVHNSDPNPAKERPPPE 488
I PN A P PE
Sbjct: 461 AGFAIVFAEDIPNTASANPVPE 482
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 27/248 (10%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILPRK 56
PGPL+ D +NV +NL + W+G Q+ +W DG + N CPI P
Sbjct: 32 PGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPAFINQCPISPGH 91
Query: 57 NWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD------- 109
++ Y FQV +Q G+F+Y ++ Q G GP V+ P + +D
Sbjct: 92 SFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPF------VVYDPNDPHASRYDVDNDDTT 145
Query: 110 LLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYR 169
+ + DW++ K + N + D L+NGKG + + +VTKG R
Sbjct: 146 ITLADWYHTAAKLGPAFPNGA--------DSTLINGKGRAPSDSSAQLSVVSVTKGKRXR 197
Query: 170 FRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADY 229
FR+ ++ +F F I H ++ET+ + + S+ + Q YS + A+Q +Y
Sbjct: 198 FRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTLNANQAVDNY 257
Query: 230 YIVASPKL 237
+I A+P
Sbjct: 258 WIRANPNF 265
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 197/504 (39%), Gaps = 92/504 (18%)
Query: 4 GPLINSTTNDFVHVNVFNNLDEPLL-----FTWNGIQQRLNSWQDGVSGTN-CPILPRKN 57
PLI +D +NV + L + + W+G Q + DG + N CPI+P ++
Sbjct: 54 APLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNES 113
Query: 58 WTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRV--NNRIVISVPFPKPEAEFDLLIGDW 115
+ Y F V Q G+++Y ++ Q G G V N +S+ + +A + I DW
Sbjct: 114 FVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSL-YDVDDASTVITIADW 172
Query: 116 FYDDYKKTRSMANTSLTAYNAIPDVILMNGKG-----PFGYQMTREPESFTVTKGMTYRF 170
Y ++ + PD L+NG G P Q+ +V G YRF
Sbjct: 173 ----YHSLSTVLFPNPNKAPPAPDTTLINGLGRNSANPSAGQLA----VVSVQSGKRYRF 224
Query: 171 RISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYY 230
RI + ++ F I H+M ++E +G +T+ SL + GQ YSV+V A+Q +Y+
Sbjct: 225 RIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYW 284
Query: 231 IVASPKLISTNDSSNLVGLGVLHYSNSK------SQVTGPLPIGPDPFDLDFSMNQAKSV 284
I A+P N + + + Y + SQ +G ++N+A +
Sbjct: 285 IRANPSN-GRNGFTGGINSAIFRYQGAAVAEPTTSQNSG------------TALNEANLI 331
Query: 285 RWNLTAGAARPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKL- 343
P P G +++ L+ + A+ + IN ++ P+ L
Sbjct: 332 PLINPGAPGNPVPGG----ADINLNLRIGRNATTAD------FTINGAPFIPPTVPVLLQ 381
Query: 344 -------ADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFNNNLDVIDS 396
+ + G V L P N V + + G GNH + +N DV+ +
Sbjct: 382 ILSGVTNPNDLLPGGAVISL---PANQVIEISIPG----GGNHPFHLH---GHNFDVVRT 431
Query: 397 WHLDXXXXXXXXXXXXEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFL-DNPGMWNL 455
S YN +PV R V + GG + F+ DNPG W L
Sbjct: 432 --------------------PGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFL 471
Query: 456 RSQLLQNWFLGQELYIRVHNSDPN 479
+ +W L L + PN
Sbjct: 472 HCHI--DWHLEAGLAVVFAEDIPN 493
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 27/250 (10%)
Query: 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILP 54
+FP PLI D +NV + L + W+G Q +W DG + N CPI
Sbjct: 30 VFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQCPIAS 89
Query: 55 RKNWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD----- 109
++ Y F V DQ G+F+Y ++ Q G GP V+ P + +D
Sbjct: 90 GHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPF------VVYDPKDPHASRYDVDNES 143
Query: 110 --LLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMT 167
+ + DW++ R L A D L+NG G T V G
Sbjct: 144 TVITLTDWYH---TAARLGPRFPLGA-----DATLINGLGRSASTPTAALAVINVQHGKR 195
Query: 168 YRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEA 227
YRFR+ ++ ++ F I H + ++E +G + + + S+ + Q YS ++ A+Q
Sbjct: 196 YRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVG 255
Query: 228 DYYIVASPKL 237
+Y+I A+P
Sbjct: 256 NYWIRANPNF 265
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 108/251 (43%), Gaps = 27/251 (10%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILPRK 56
P PLI D +NV + L + W+G Q+ +W DG + N CPI
Sbjct: 32 PAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWADGPAFVNQCPIASGH 91
Query: 57 NWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDL------ 110
++ Y FQV DQ G+F+Y ++ Q G GP V+ P + +D+
Sbjct: 92 SFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPF------VVYDPNDPHASLYDIDNDDTV 145
Query: 111 -LIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYR 169
+ DW++ K S D L+NG G + VT+G YR
Sbjct: 146 ITLADWYHVAAKLGPRFPFGS--------DSTLINGLGRTTGIAPSDLAVIKVTQGKRYR 197
Query: 170 FRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADY 229
FR+ ++ + F I NH M ++E + T + + S+ + Q YS ++ A Q +Y
Sbjct: 198 FRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLDASQPVDNY 257
Query: 230 YIVASPKLIST 240
+I A+P +T
Sbjct: 258 WIRANPAFGNT 268
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 28/270 (10%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPILPRK 56
PGPLI D +NV NNL + W+G Q+ +W DG + N CPI
Sbjct: 32 PGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGPAFVNQCPIAAGS 91
Query: 57 NWTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD------- 109
++ Y F Q G+F+Y ++ Q G GP V+ P +D
Sbjct: 92 SFLYDFSTPIQAGTFWYHSHLSTQYCDGDRGPF------VVYDPNDPSANLYDVDNLNTV 145
Query: 110 LLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYR 169
+ + DW++ + + + D L+NG+G + + +VT G YR
Sbjct: 146 ITLTDWYHTAAQNGPAKPGGA--------DATLINGQGRGPSSPSADLAVISVTAGKRYR 197
Query: 170 FRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADY 229
FR+ + ++ F I H+M +++ + + + + ++ Q YS ++ A+Q +Y
Sbjct: 198 FRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSFILNANQAVNNY 257
Query: 230 YIVASPKLISTNDSSNLVGLGVLHYSNSKS 259
+I A+P + +N + +L YS + +
Sbjct: 258 WIRANPNQGNVG-FTNGINSAILRYSGAAA 286
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 195/480 (40%), Gaps = 64/480 (13%)
Query: 4 GPLINSTTNDFVHVNVFNNL-DEPLLFTWNGIQQRLNSWQDGVSG-TNCPILPRKNW-TY 60
GP I + D V V V NNL W+GI Q+ + DG +G T CPI P+ TY
Sbjct: 66 GPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTY 125
Query: 61 VFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDY 120
++ + Q G+ +Y + Q G G I++N S+P+ D+ +G + DY
Sbjct: 126 RWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPA--SLPY-------DIDLGVFPITDY 175
Query: 121 KKTRSMANTSLTAYNAIP--DVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSV 178
+ T NA P D +L+NG + + T+T G +R RI N +
Sbjct: 176 YYRAADDLVHFTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTE 235
Query: 179 FSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYI-VASPKL 237
F + NH M ++ + N +T+ SL + VGQ Y V++ A + +Y+ V
Sbjct: 236 NHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQ 295
Query: 238 ISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFD---LDFSMNQAKSVRWNLTAGAAR 294
+ S N + HY+ + + P G P D LD +++ V ++ +
Sbjct: 296 AACGGSLNPHPAAIFHYAGAPGGL--PTDEGTPPVDHQCLD-TLDVRPVVPRSVPVNSFV 352
Query: 295 PNPQGTFNVS-NVTLSQTFILQGSKAEIS-GWPRYVINNVSYLTLETPLKLADYFVNGSG 352
P T V+ ++T + F+ + + ++I+ W + +I+ + LT T ++D V
Sbjct: 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYI--LTGNTSYPVSDNIVQVDA 410
Query: 353 VYQLDWFPTNSVNDEATRGVSVVTGNH-KGWIELVFNNNLDVIDSWHLDXXXXXXXXXXX 411
V Q ++ + ++ S+ H G LV + DV
Sbjct: 411 VDQWTYW---LIENDPEGPFSLPHPMHLHGHDFLVLGRSPDV------------------ 449
Query: 412 XEWAPESRSTYNLFDPVV------------RSTVQVYPGGWTAVYAFLDNPGMWNLRSQL 459
P + +FDP V R T + GGW + DNPG W +
Sbjct: 450 ----PAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHI 505
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 195/480 (40%), Gaps = 64/480 (13%)
Query: 4 GPLINSTTNDFVHVNVFNNL-DEPLLFTWNGIQQRLNSWQDGVSG-TNCPILPRKNW-TY 60
GP I + D V V V NNL W+GI Q+ + DG +G T CPI P+ TY
Sbjct: 66 GPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTY 125
Query: 61 VFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDY 120
++ + Q G+ +Y + Q G G I++N S+P+ D+ +G + DY
Sbjct: 126 RWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPA--SLPY-------DIDLGVFPITDY 175
Query: 121 KKTRSMANTSLTAYNAIP--DVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSV 178
+ T NA P D +L+NG + + T+T G +R RI N +
Sbjct: 176 YYRAADDLVHFTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTE 235
Query: 179 FSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYI-VASPKL 237
F + NH M ++ + N +T+ SL + VGQ Y V++ A + +Y+ V
Sbjct: 236 NHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQ 295
Query: 238 ISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFD---LDFSMNQAKSVRWNLTAGAAR 294
+ S N + HY+ + + P G P D LD +++ V ++ +
Sbjct: 296 AACGGSLNPHPAAIFHYAGAPGGL--PTDEGTPPVDHQCLD-TLDVRPVVPRSVPVNSFV 352
Query: 295 PNPQGTFNVS-NVTLSQTFILQGSKAEIS-GWPRYVINNVSYLTLETPLKLADYFVNGSG 352
P T V+ ++T + F+ + + ++I+ W + +I+ + LT T ++D V
Sbjct: 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYI--LTGNTSYPVSDNIVQVDA 410
Query: 353 VYQLDWFPTNSVNDEATRGVSVVTGNH-KGWIELVFNNNLDVIDSWHLDXXXXXXXXXXX 411
V Q ++ + ++ S+ H G LV + DV
Sbjct: 411 VDQWTYW---LIENDPEGPFSLPHPMHLHGHDFLVLGRSPDV------------------ 449
Query: 412 XEWAPESRSTYNLFDPVV------------RSTVQVYPGGWTAVYAFLDNPGMWNLRSQL 459
P + +FDP V R T + GGW + DNPG W +
Sbjct: 450 ----PAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHI 505
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 195/480 (40%), Gaps = 64/480 (13%)
Query: 4 GPLINSTTNDFVHVNVFNNL-DEPLLFTWNGIQQRLNSWQDGVSG-TNCPILPRKNW-TY 60
GP I + D V V V NNL W+GI Q+ + DG +G T CPI P+ TY
Sbjct: 66 GPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTY 125
Query: 61 VFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDY 120
++ + Q G+ +Y + Q G G I++N S+P+ D+ +G + DY
Sbjct: 126 RWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPA--SLPY-------DIDLGVFPITDY 175
Query: 121 KKTRSMANTSLTAYNAIP--DVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSV 178
+ T NA P D +L+NG + + T+T G +R RI N +
Sbjct: 176 YYRAADDLVHFTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTE 235
Query: 179 FSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYI-VASPKL 237
F + NH M ++ + N +T+ SL + VGQ Y V++ A + +Y+ V
Sbjct: 236 NHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQ 295
Query: 238 ISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFD---LDFSMNQAKSVRWNLTAGAAR 294
+ S N + HY+ + + P G P D LD +++ V ++ +
Sbjct: 296 AACGGSLNPHPAAIFHYAGAPGGL--PTDEGTPPVDHQCLD-TLDVRPVVPRSVPVNSFV 352
Query: 295 PNPQGTFNVS-NVTLSQTFILQGSKAEIS-GWPRYVINNVSYLTLETPLKLADYFVNGSG 352
P T V+ ++T + F+ + + ++I+ W + +I+ + LT T ++D V
Sbjct: 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYI--LTGNTSYPVSDNIVQVDA 410
Query: 353 VYQLDWFPTNSVNDEATRGVSVVTGNH-KGWIELVFNNNLDVIDSWHLDXXXXXXXXXXX 411
V Q ++ + ++ S+ H G LV + DV
Sbjct: 411 VDQWTYW---LIENDPEGPFSLPHPMHLHGHDFLVLGRSPDV------------------ 449
Query: 412 XEWAPESRSTYNLFDPVV------------RSTVQVYPGGWTAVYAFLDNPGMWNLRSQL 459
P + +FDP V R T + GGW + DNPG W +
Sbjct: 450 ----PAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHI 505
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 105/239 (43%), Gaps = 29/239 (12%)
Query: 4 GPLINSTTNDFVHVNVFNNLD-EPLLFTWNGIQQRLNSWQDGVSG-TNCPILPRKNW-TY 60
GP I + D + V V NNL W+G++Q N + DG +G T CPI P+ TY
Sbjct: 107 GPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTY 166
Query: 61 VFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDY 120
F+ Q G+ +Y + Q G G I+++ S+P+ F L+ D++Y
Sbjct: 167 KFRAT-QYGTSWYHSHFSAQYGNGVVGTIQIDGPA--SLPYDIDLGVFPLM--DYYYRSA 221
Query: 121 KKTRSMANTSLTAYNAIP--DVILMNGKGPFGYQMTREPES-------FTVTKGMTYRFR 171
+ T N P D +L NG R PE+ T+T G +R R
Sbjct: 222 DEL-----VHFTQSNGAPPSDNVLFNGTA-------RHPETGAGQWYNVTLTPGKRHRLR 269
Query: 172 ISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYY 230
I N + F + H M ++ T+ N T+ SL + VGQ Y V + A+ +Y+
Sbjct: 270 IINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYW 328
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 2 FPGPLINSTTNDFVHV---NVFNNLDEPLLFTWNGIQQRLNSWQDGVSG-TNCPILPRKN 57
FP P I D V + N NN + + F +G+ Q + DGV T CPI P
Sbjct: 31 FPWPDITVNKGDRVQIYLTNGMNNTNTSMHF--HGLFQNGTASMDGVPFLTQCPIAPGST 88
Query: 58 WTYVFQVKDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFY 117
Y F V +G+++Y + Q G G + + S P+ E E L + +W++
Sbjct: 89 MLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDD---SFPYDYDE-ELSLSLSEWYH 144
Query: 118 D---DYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISN 174
D D K+ M+ + T IP +++N +++ +P++ TY RI N
Sbjct: 145 DLVTDLTKSF-MSVYNPTGAEPIPQNLIVNNTMNLTWEV--QPDT-------TYLLRIVN 194
Query: 175 VGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEAD 228
VG S F I++H+M +VE +G T + L + V Q Y+VLV +N+ D
Sbjct: 195 VGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHT-KNDTD 247
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 27/241 (11%)
Query: 2 FPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYV 61
FPGP + D V + + N L EP W+G+ V I P ++WTY
Sbjct: 44 FPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGL-----PISPKVDDPFLEIPPGESWTYE 98
Query: 62 FQV-KDQIGSFFYFPSINFQKA----GGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWF 116
F V K+ G+F+Y P ++ + A G G + V + + ++P + E L++ D
Sbjct: 99 FTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSL-DAIPELREAEEHLLVLKDL- 156
Query: 117 YDDYKKTRSMANTSLTAYNAIP-DVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNV 175
+ R +T + N D++L+NG V + T R R+ N
Sbjct: 157 --ALQGGRPAPHTPMDWMNGKEGDLVLVNGAL----------RPTLVAQKATLRLRLLNA 204
Query: 176 GSVFSFNFRIQNHKMVLVETEGSYTNQ-ITLRSLDVHVGQSYSVLVTADQNEADYYIVAS 234
+ + +Q+H + L+ +G + + + + L + G+ VLV + E + + A
Sbjct: 205 SNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQAL 263
Query: 235 P 235
P
Sbjct: 264 P 264
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 37/244 (15%)
Query: 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTY 60
+ P P I D + + V N L E W+G+ + QDG + PIL + Y
Sbjct: 78 LVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVP--VPPDQDG--SPHDPILAGEERIY 133
Query: 61 VFQV-KDQIGSFFYFPSINFQKAGGGFGPIRVNNRIVISVPFPKPEA-----EFDLLIGD 114
F++ +D G+++Y P ++ + F + + VI K +A E DL+I D
Sbjct: 134 RFEIPQDSAGTYWYHPHPHYTASKQVF--MGLAGAFVIKA---KKDALSHLKEKDLMISD 188
Query: 115 WFYDDYKKTRSMANTSLTAY--NAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRI 172
D+ + N +L + + +L+NG+ +P+ T R RI
Sbjct: 189 LRLDE---NAQIPNNNLNDWLNGREGEFVLINGQF--------KPKIKLAT---NERIRI 234
Query: 173 SNVGSVFSFNFRIQNHKMVLVETEGSYTNQ-ITLRSLDVHVGQSYSVLVTADQN-----E 226
N + N RIQ K +LV T+G + I L + VL+ A ++ E
Sbjct: 235 YNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPKDGNFKLE 294
Query: 227 ADYY 230
+ YY
Sbjct: 295 SAYY 298
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQ-DGV-SGTNCPILPRKNWTY 60
P PLI+ D V VNV N P W+G+ QR +WQ DGV T I P +TY
Sbjct: 32 PAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQR-GTWQSDGVPHATQHAIEPGDTFTY 90
Query: 61 VFQVKDQIGSFFYFPSINFQK---AGGGFGPIRVNNRIVISVPFPKPEA---EFDLLIGD 114
F+ + G+ +Y +N + G +GP+ V + P P + ++ L++ D
Sbjct: 91 KFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPK----NPLPIEKTVTKDYILMLSD 145
Query: 115 W 115
W
Sbjct: 146 W 146
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 2 FPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYV 61
PGPLI D +H+ N +D P+ +G+ ++S DG + + P TY
Sbjct: 39 IPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEISS--DGTKQSRSDVEPGGTRTYT 96
Query: 62 FQV 64
++
Sbjct: 97 WRT 99
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 22/231 (9%)
Query: 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQ 63
GP + V V+++N L E W+G++ + DG G I P +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 VKDQIGSFFYFP----SINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD--LLIGDWFY 117
V + ++ P Q A G G + + + ++ + PK D +++ D +
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 DDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGS 177
+ + A D +L NG Y P + R R+ N +
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGA---IYPQHAAPRGW-------LRLRLLNGCN 212
Query: 178 VFSFNFRIQNHK--MVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNE 226
S NF +++ V+ G + + L V +G+ + VLV + N+
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK 263
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 22/231 (9%)
Query: 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQ 63
GP + V V+++N L E W+G++ + DG G I P +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 VKDQIGSFFYFP----SINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD--LLIGDWFY 117
V + ++ P Q A G G + + + ++ + PK D +++ D +
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 DDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGS 177
+ + A D +L NG Y P + R R+ N +
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGA---IYPQHAAPRGW-------LRLRLLNGCN 212
Query: 178 VFSFNFRIQNHK--MVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNE 226
S NF +++ V+ G + + L V +G+ + VLV + N+
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK 263
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 22/231 (9%)
Query: 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQ 63
GP + V V+++N L E W+G++ + DG G I P +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 VKDQIGSFFYFP----SINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD--LLIGDWFY 117
V + ++ P Q A G G + + + ++ + PK D +++ D +
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 DDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGS 177
+ + A D +L NG Y P + R R+ N +
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGA---IYPQHAAPRGW-------LRLRLLNGCN 212
Query: 178 VFSFNFRIQNHK--MVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNE 226
S NF +++ V+ G + + L V +G+ + VLV + N+
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK 263
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 22/231 (9%)
Query: 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQ 63
GP + V V+++N L E W+G++ + DG G I P +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 VKDQIGSFFYFP----SINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD--LLIGDWFY 117
V + ++ P Q A G G + + + ++ + PK D +++ D +
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 DDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGS 177
+ + A D +L NG Y P + R R+ N +
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGA---IYPQHAAPRGW-------LRLRLLNGCN 212
Query: 178 VFSFNFRIQNHK--MVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNE 226
S NF +++ V+ G + + L V +G+ + VLV + N+
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK 263
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 22/231 (9%)
Query: 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQ 63
GP + V V+++N L E W+G++ + DG G I P +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 VKDQIGSFFYFP----SINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD--LLIGDWFY 117
V + ++ P Q A G G + + + ++ + PK D +++ D +
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 DDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGS 177
+ + A D +L NG Y P + R R+ N +
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGA---IYPQHAAPRGW-------LRLRLLNGCN 212
Query: 178 VFSFNFRIQNHK--MVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNE 226
S NF +++ V+ G + + L V +G+ + VLV + N+
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK 263
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 22/231 (9%)
Query: 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQ 63
GP + V V+++N L E W+G++ + DG G I P +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 VKDQIGSFFYFP----SINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD--LLIGDWFY 117
V + ++ P Q A G G + + + ++ + PK D +++ D +
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 DDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGS 177
+ + A D +L NG Y P + R R+ N +
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGA---IYPQHAAPRGW-------LRLRLLNGCN 212
Query: 178 VFSFNFRIQNHK--MVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNE 226
S NF +++ V+ G + + L V +G+ + VLV + N+
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK 263
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 22/231 (9%)
Query: 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQ 63
GP + V V+++N L E W+G++ + DG G I P +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 VKDQIGSFFYFP----SINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD--LLIGDWFY 117
V + ++ P Q A G G + + + ++ + PK D +++ D +
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 DDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGS 177
+ + A D +L NG Y P + R R+ N +
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGA---IYPQHAAPRGW-------LRLRLLNGCN 212
Query: 178 VFSFNFRIQNHK--MVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNE 226
S NF +++ V+ G + + L V +G+ + VLV + N+
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK 263
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 22/231 (9%)
Query: 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQ 63
GP + V V+++N L E W+G++ + DG G I P +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 VKDQIGSFFYFP----SINFQKAGGGFGPIRVNNRIVISVPFPKPEAEFD--LLIGDWFY 117
V + ++ P Q A G G + + + ++ + PK D +++ D +
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 DDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGS 177
+ + A D +L NG Y P + R R+ N +
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGA---IYPQHAAPRGW-------LRLRLLNGCN 212
Query: 178 VFSFNFRIQNHK--MVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNE 226
S NF +++ V+ G + + L V +G+ + VLV + N+
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK 263
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQV 64
P I V + + N L EP + W+G +W + + I P +++ Y F V
Sbjct: 38 PTIILRRGQRVDMTLKNKLTEPTIVHWHGFDV---NWHNDAH-PSFAITPGESYNYSFDV 93
Query: 65 KDQIGSFFYFP 75
++ G++ Y P
Sbjct: 94 VNRAGTYLYHP 104
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
Length = 278
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVF 62
PGPLI D +H+ N +D +G+ ++S DG + + P TY +
Sbjct: 37 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDAEISS--DGTAMNKSDVEPGGTRTYTW 94
Query: 63 QV 64
+
Sbjct: 95 RT 96
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVF 62
PGPLI D +H+ N +D +G+ ++S DG + + P TY +
Sbjct: 75 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEISS--DGTAMNKSDVEPGGTRTYTW 132
Query: 63 QV 64
+
Sbjct: 133 RT 134
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 3 PGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVF 62
PGPLI D +H+ N +D +G+ ++S DG + + P TY +
Sbjct: 34 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEISS--DGTAMNKSDVEPGGTRTYTW 91
Query: 63 QV 64
+
Sbjct: 92 RT 93
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 432 TVQVYPGGWTAVYAFLDNPGMWNLRSQLLQNWFLGQELYIRVHNSDPNPAKE 483
T+ ++P Y NPG W L Q L + G + + +V + + +K+
Sbjct: 294 TINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQECNKSSSKD 345
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles
Of Various Metal Cation Binding Sites
Length = 1065
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 432 TVQVYPGGWTAVYAFLDNPGMWNLRSQLLQNWFLGQELYIRVHNSDPNPAKE 483
T+ ++P Y NPG W L Q L + G + + +V + + +K+
Sbjct: 313 TINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQECNKSSSKD 364
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,513,492
Number of Sequences: 62578
Number of extensions: 722632
Number of successful extensions: 1679
Number of sequences better than 100.0: 53
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1566
Number of HSP's gapped (non-prelim): 79
length of query: 521
length of database: 14,973,337
effective HSP length: 103
effective length of query: 418
effective length of database: 8,527,803
effective search space: 3564621654
effective search space used: 3564621654
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)