Query 009960
Match_columns 521
No_of_seqs 231 out of 1834
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:47:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 2.9E-96 1E-100 791.3 52.3 475 1-497 30-542 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.1E-93 3.7E-98 765.4 47.8 452 1-498 94-566 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 1.2E-91 4.3E-96 741.3 45.8 454 1-502 30-497 (499)
4 1zpu_A Iron transport multicop 100.0 2.2E-91 7.6E-96 748.1 46.6 453 1-497 30-504 (534)
5 3t6v_A Laccase; beta barrel, o 100.0 1.6E-91 5.4E-96 740.6 44.8 451 1-497 31-492 (495)
6 1v10_A Laccase; multicopper bl 100.0 1E-90 3.5E-95 742.1 43.4 455 1-500 51-515 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 6.1E-90 2.1E-94 733.7 42.0 452 1-501 31-495 (503)
8 2q9o_A Laccase-1; multicopper 100.0 8.3E-89 2.8E-93 732.6 44.9 458 1-499 63-546 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 6.9E-82 2.4E-86 661.7 40.1 374 1-474 43-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 1.4E-81 4.7E-86 660.2 32.7 379 1-477 46-443 (451)
11 3aw5_A Multicopper oxidase; be 100.0 3.3E-80 1.1E-84 648.6 36.2 380 2-474 35-448 (448)
12 3abg_A Bilirubin oxidase; clea 100.0 7.2E-80 2.5E-84 657.9 35.5 394 1-477 65-477 (534)
13 2wsd_A Spore coat protein A; o 100.0 1.4E-79 4.9E-84 655.4 35.1 401 1-476 54-511 (513)
14 3zx1_A Oxidoreductase, putativ 100.0 2.4E-78 8.2E-83 635.7 39.4 377 1-474 78-480 (481)
15 3gyr_A PHS, phenoxazinone synt 100.0 3.7E-77 1.3E-81 653.9 37.1 419 1-478 61-594 (612)
16 3od3_A Blue copper oxidase CUE 100.0 2.5E-76 8.6E-81 620.0 31.9 387 1-473 44-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 1.9E-74 6.5E-79 620.5 41.6 418 1-477 61-593 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 2.1E-52 7.1E-57 478.7 34.6 360 1-410 91-488 (1065)
19 2r7e_A Coagulation factor VIII 100.0 1.5E-54 5E-59 477.8 14.0 217 1-236 71-314 (742)
20 2dv6_A Nitrite reductase; elec 100.0 2.9E-48 9.8E-53 408.9 28.7 371 4-477 54-435 (447)
21 3g5w_A Multicopper oxidase typ 100.0 2.2E-48 7.5E-53 389.7 23.1 242 1-258 30-278 (318)
22 2zwn_A Two-domain type laccase 100.0 5.9E-47 2E-51 383.4 27.5 242 1-258 31-279 (339)
23 3kw8_A Laccase, putative coppe 100.0 6E-46 2.1E-50 365.3 24.3 93 1-95 32-142 (276)
24 2j5w_A Ceruloplasmin, ferroxid 100.0 4.5E-45 1.5E-49 418.1 22.6 385 1-477 626-1060(1065)
25 1kbv_A ANIA, major outer membr 100.0 3E-44 1E-48 361.8 23.1 231 1-258 66-309 (327)
26 3cg8_A Laccase; oxidoreductase 100.0 2.1E-43 7.2E-48 357.0 23.2 107 1-114 73-197 (343)
27 3gdc_A Multicopper oxidase; be 100.0 5E-43 1.7E-47 346.7 25.0 206 1-236 62-273 (288)
28 3tas_A Small laccase, multi-co 100.0 2.7E-42 9.2E-47 345.2 20.3 196 1-236 38-256 (313)
29 3t9w_A Small laccase, multi-co 100.0 1.4E-41 4.9E-46 337.4 20.4 196 1-236 54-272 (299)
30 2zoo_A Probable nitrite reduct 100.0 8.1E-41 2.8E-45 351.3 22.6 237 1-259 56-300 (442)
31 1sdd_B Coagulation factor V; c 100.0 9.7E-41 3.3E-45 366.1 20.2 219 1-236 65-312 (647)
32 1sdd_A Coagulation factor V; c 100.0 4.2E-41 1.4E-45 335.8 10.8 206 1-236 56-285 (306)
33 1mzy_A Copper-containing nitri 100.0 3.1E-39 1.1E-43 326.6 22.3 238 1-258 60-320 (333)
34 1oe1_A Dissimilatory copper-co 100.0 5.8E-39 2E-43 325.2 20.8 237 1-258 61-320 (336)
35 2bw4_A Copper-containing nitri 100.0 1.8E-38 6E-43 322.1 21.0 238 1-258 67-326 (340)
36 2r7e_B Coagulation factor VIII 100.0 3E-39 1E-43 356.4 10.4 221 1-236 195-441 (770)
37 2dv6_A Nitrite reductase; elec 100.0 3.7E-36 1.3E-40 316.5 25.4 230 1-258 191-435 (447)
38 2r7e_A Coagulation factor VIII 100.0 4.8E-37 1.7E-41 338.4 4.7 217 1-236 448-696 (742)
39 3gdc_A Multicopper oxidase; be 100.0 6E-30 2.1E-34 252.9 18.6 230 138-475 54-288 (288)
40 2zwn_A Two-domain type laccase 100.0 3.5E-29 1.2E-33 253.1 18.5 247 138-476 23-278 (339)
41 3g5w_A Multicopper oxidase typ 100.0 4.9E-29 1.7E-33 249.4 16.9 249 139-477 23-278 (318)
42 3t9w_A Small laccase, multi-co 100.0 1.2E-27 4.2E-32 237.2 16.7 217 158-478 58-290 (299)
43 3tas_A Small laccase, multi-co 99.9 1.6E-26 5.5E-31 230.9 20.2 219 157-479 41-275 (313)
44 1sdd_A Coagulation factor V; c 99.9 2.1E-25 7.1E-30 222.2 1.7 235 141-476 52-301 (306)
45 1kbv_A ANIA, major outer membr 99.9 3.4E-22 1.2E-26 200.9 18.2 248 139-477 59-309 (327)
46 1sdd_B Coagulation factor V; c 99.9 3.3E-22 1.1E-26 219.1 19.3 244 158-477 69-329 (647)
47 2bw4_A Copper-containing nitri 99.9 2E-21 6.8E-26 196.7 21.1 259 138-477 59-326 (340)
48 2r7e_B Coagulation factor VIII 99.8 2.4E-22 8.3E-27 221.8 4.5 246 156-477 197-458 (770)
49 1mzy_A Copper-containing nitri 99.8 5.6E-20 1.9E-24 185.5 20.1 261 139-477 53-320 (333)
50 2zoo_A Probable nitrite reduct 99.8 3.5E-19 1.2E-23 186.7 19.2 249 139-478 49-300 (442)
51 1oe1_A Dissimilatory copper-co 99.8 2.5E-18 8.5E-23 173.6 22.0 258 139-477 54-320 (336)
52 3cvb_A Plastocyanin; cupredoxi 99.6 5.7E-17 2E-21 134.9 3.1 89 1-93 15-105 (105)
53 2xu9_A Laccase; oxidoreductase 99.6 2E-14 6.9E-19 150.1 20.7 200 4-236 187-425 (439)
54 2uxt_A Protein SUFI, SUFI; oxi 99.6 2.1E-14 7.1E-19 150.3 19.1 209 3-236 191-426 (451)
55 1v10_A Laccase; multicopper bl 99.6 8.9E-14 3E-18 148.1 21.9 224 5-236 212-476 (521)
56 1hfu_A Laccase 1; oxidoreducta 99.6 1.7E-13 5.8E-18 145.4 23.0 227 4-236 184-455 (503)
57 3t6v_A Laccase; beta barrel, o 99.5 7.3E-13 2.5E-17 139.7 16.6 226 4-236 188-456 (495)
58 3kw8_A Laccase, putative coppe 99.4 2.9E-13 9.9E-18 132.4 10.2 92 3-96 166-268 (276)
59 1aoz_A Ascorbate oxidase; oxid 99.4 4.1E-12 1.4E-16 136.4 18.7 223 5-236 204-510 (552)
60 3zx1_A Oxidoreductase, putativ 99.4 1.2E-11 4E-16 129.8 21.6 216 4-236 221-466 (481)
61 3pxl_A Laccase; 4-copper prote 99.4 1.1E-11 3.6E-16 130.9 21.0 224 4-236 185-456 (499)
62 1zpu_A Iron transport multicop 99.4 1.8E-11 6E-16 130.6 22.8 230 4-236 177-466 (534)
63 2cal_A Rusticyanin; iron respi 99.4 2.8E-13 9.5E-18 120.2 6.6 86 3-92 59-154 (154)
64 2q9o_A Laccase-1; multicopper 99.3 7.6E-11 2.6E-15 126.5 22.2 230 4-236 214-506 (559)
65 3aw5_A Multicopper oxidase; be 99.3 5.9E-11 2E-15 123.9 19.5 200 4-236 179-434 (448)
66 3od3_A Blue copper oxidase CUE 99.3 4.1E-11 1.4E-15 125.6 18.3 222 4-236 193-475 (488)
67 3cg8_A Laccase; oxidoreductase 99.2 2E-11 6.8E-16 122.9 10.0 94 3-98 207-311 (343)
68 2ov0_A Amicyanin; beta-sandwic 99.2 2.1E-11 7E-16 101.1 8.3 75 2-92 30-105 (105)
69 2g23_A PHS, phenoxazinone synt 99.2 4.5E-10 1.5E-14 120.8 20.5 222 4-236 264-576 (612)
70 1iby_A Nitrosocyanin; RED copp 99.2 3E-11 1E-15 101.4 8.2 78 2-93 35-112 (112)
71 2aan_A Auracyanin A; cupredoxi 99.2 2.7E-11 9.1E-16 105.8 7.0 94 374-474 36-139 (139)
72 2wsd_A Spore coat protein A; o 99.2 3E-10 1E-14 120.7 16.5 207 4-236 240-495 (513)
73 3cvb_A Plastocyanin; cupredoxi 99.2 7.9E-11 2.7E-15 97.4 9.2 85 374-475 20-105 (105)
74 3abg_A Bilirubin oxidase; clea 99.2 7E-11 2.4E-15 125.8 11.2 220 4-236 211-460 (534)
75 3sqr_A Laccase; multicopper ox 99.1 1.7E-09 5.8E-14 115.6 18.9 225 4-236 252-529 (580)
76 2gim_A Plastocyanin; beta shee 99.1 1.3E-10 4.5E-15 96.3 7.9 82 5-93 20-106 (106)
77 1fwx_A Nitrous oxide reductase 99.0 3E-10 1E-14 120.5 9.0 84 1-94 509-593 (595)
78 2aan_A Auracyanin A; cupredoxi 99.0 1.7E-09 5.8E-14 94.2 9.8 86 4-92 34-139 (139)
79 3gyr_A PHS, phenoxazinone synt 98.9 2E-08 7E-13 109.2 18.0 92 138-236 458-576 (612)
80 2gim_A Plastocyanin; beta shee 98.9 3.5E-09 1.2E-13 87.6 7.1 84 374-474 21-105 (106)
81 2plt_A Plastocyanin; electron 98.8 3.8E-09 1.3E-13 86.1 6.3 79 5-92 18-98 (98)
82 4hci_A Cupredoxin 1; structura 98.8 7.3E-09 2.5E-13 84.7 7.4 73 5-92 28-100 (100)
83 1qhq_A Protein (auracyanin); e 98.8 2.3E-08 7.9E-13 87.1 10.6 89 4-93 32-140 (140)
84 1pcs_A Plastocyanin; electron 98.8 4.3E-09 1.5E-13 85.7 5.1 80 5-92 19-98 (98)
85 1qhq_A Protein (auracyanin); e 98.7 2.6E-08 8.8E-13 86.8 8.4 96 374-474 34-139 (140)
86 1bxv_A Plastocyanin; copper pr 98.7 2.5E-08 8.7E-13 79.8 7.6 74 4-92 18-91 (91)
87 1pcs_A Plastocyanin; electron 98.7 2.9E-08 1E-12 80.7 6.9 78 374-474 20-98 (98)
88 1b3i_A PETE protein, protein ( 98.7 4.8E-08 1.7E-12 79.3 8.1 76 5-92 19-97 (97)
89 1kdj_A Plastocyanin; electron 98.6 5.4E-08 1.9E-12 79.7 7.6 76 5-92 17-102 (102)
90 2plt_A Plastocyanin; electron 98.6 1E-07 3.5E-12 77.4 8.7 80 374-474 19-98 (98)
91 1byp_A Protein (plastocyanin); 98.6 1.4E-07 4.9E-12 76.7 9.4 76 5-92 17-99 (99)
92 1plc_A Plastocyanin; electron 98.6 1.5E-07 5.1E-12 76.7 9.3 76 5-92 17-99 (99)
93 3erx_A Pseudoazurin; copper pr 98.6 9.7E-08 3.3E-12 80.8 8.3 74 5-93 21-94 (123)
94 1bxv_A Plastocyanin; copper pr 98.6 1.5E-07 5.2E-12 75.2 8.6 72 374-474 20-91 (91)
95 3tu6_A Pseudoazurin (blue copp 98.6 8.8E-08 3E-12 81.5 7.0 76 5-95 23-98 (127)
96 1iby_A Nitrosocyanin; RED copp 98.5 4.1E-07 1.4E-11 75.8 10.0 74 374-475 39-112 (112)
97 3ef4_A Pseudoazurin, blue copp 98.5 2.1E-07 7.3E-12 78.6 7.8 75 5-94 22-96 (124)
98 1b3i_A PETE protein, protein ( 98.5 7.7E-08 2.6E-12 78.0 4.6 78 374-474 20-97 (97)
99 3c75_A Amicyanin; copper prote 98.5 4.2E-07 1.5E-11 78.1 8.8 72 5-92 60-132 (132)
100 1iuz_A Plastocyanin; electron 98.4 4.4E-07 1.5E-11 73.7 7.0 76 5-92 18-98 (98)
101 4hci_A Cupredoxin 1; structura 98.4 1.2E-06 4E-11 71.4 9.5 72 374-474 29-100 (100)
102 1byp_A Protein (plastocyanin); 98.4 8.7E-07 3E-11 72.0 8.2 82 374-474 18-99 (99)
103 1cuo_A Protein (azurin ISO-2); 98.3 2.8E-06 9.7E-11 72.4 9.7 88 5-93 18-129 (129)
104 1paz_A Pseudoazurin precursor; 98.3 1.7E-06 5.9E-11 73.2 8.2 75 5-94 21-95 (123)
105 1pmy_A Pseudoazurin; electron 98.3 1.9E-06 6.6E-11 72.8 7.7 75 5-94 21-95 (123)
106 1id2_A Amicyanin; beta barrel, 98.3 3.2E-06 1.1E-10 69.6 8.9 72 5-92 34-106 (106)
107 1kdj_A Plastocyanin; electron 98.3 1.2E-06 4E-11 71.7 6.0 84 374-474 18-102 (102)
108 3ay2_A Lipid modified azurin p 98.1 4.8E-06 1.6E-10 73.9 8.0 88 5-93 58-167 (167)
109 1plc_A Plastocyanin; electron 98.1 9E-06 3.1E-10 65.9 7.4 82 374-474 18-99 (99)
110 2ccw_A Azurin II, AZN-2; elect 98.1 1.8E-05 6.2E-10 67.3 9.5 87 5-92 18-128 (129)
111 2ux6_A Pseudoazurin; type-1 co 98.0 1.3E-05 4.6E-10 67.5 7.5 73 5-94 21-93 (122)
112 1nwp_A Azurin; electron transp 98.0 3E-05 1E-09 65.8 9.6 87 5-92 18-128 (128)
113 2iaa_C Azurin; quinoprotein, t 98.0 2.7E-05 9.3E-10 66.1 9.0 87 5-92 17-127 (128)
114 2ov0_A Amicyanin; beta-sandwic 97.9 2.2E-05 7.4E-10 64.4 7.6 71 374-473 34-104 (105)
115 2cal_A Rusticyanin; iron respi 97.9 4.8E-05 1.6E-09 66.9 9.5 83 373-473 61-153 (154)
116 1fwx_A Nitrous oxide reductase 97.9 4E-05 1.4E-09 81.4 10.3 74 374-476 514-593 (595)
117 3sbq_A Nitrous-oxide reductase 97.8 4.3E-05 1.5E-09 79.6 8.9 78 3-93 556-637 (638)
118 3tu6_A Pseudoazurin (blue copp 97.6 0.00017 5.7E-09 61.1 7.7 101 374-514 24-124 (127)
119 3erx_A Pseudoazurin; copper pr 97.6 0.00017 5.7E-09 60.8 7.3 99 374-511 22-120 (123)
120 3fsa_A Azurin; copper, cupredo 97.4 0.00057 1.9E-08 57.2 9.1 83 4-92 17-125 (125)
121 3ef4_A Pseudoazurin, blue copp 97.4 0.00028 9.5E-09 59.4 6.2 74 374-476 23-96 (124)
122 1iuz_A Plastocyanin; electron 97.2 0.0011 3.9E-08 53.2 8.5 80 374-474 19-98 (98)
123 1id2_A Amicyanin; beta barrel, 97.2 0.001 3.5E-08 54.4 7.8 71 374-473 35-105 (106)
124 3c75_A Amicyanin; copper prote 97.0 0.0017 6E-08 55.3 7.8 72 374-474 61-132 (132)
125 1paz_A Pseudoazurin precursor; 97.0 0.003 1E-07 53.1 8.9 36 436-475 59-94 (123)
126 1pmy_A Pseudoazurin; electron 96.9 0.0019 6.6E-08 54.2 6.8 38 435-476 58-95 (123)
127 2cua_A Protein (CUA); CUA cent 96.6 0.0058 2E-07 52.1 7.9 74 6-93 61-135 (135)
128 3sbq_A Nitrous-oxide reductase 96.4 0.013 4.3E-07 61.3 10.3 74 374-474 559-636 (638)
129 2ux6_A Pseudoazurin; type-1 co 96.4 0.01 3.5E-07 49.7 7.7 71 374-475 22-92 (122)
130 3s8f_B Cytochrome C oxidase su 96.1 0.016 5.3E-07 51.2 8.0 75 5-93 93-168 (168)
131 3ay2_A Lipid modified azurin p 95.9 0.015 5.1E-07 51.3 6.9 87 374-474 59-166 (167)
132 2cua_A Protein (CUA); CUA cent 95.7 0.046 1.6E-06 46.5 9.0 72 375-474 62-134 (135)
133 1cuo_A Protein (azurin ISO-2); 95.3 0.055 1.9E-06 45.6 8.1 87 374-474 19-128 (129)
134 2iaa_C Azurin; quinoprotein, t 94.8 0.079 2.7E-06 44.5 7.4 93 374-474 18-127 (128)
135 3s8f_B Cytochrome C oxidase su 94.6 0.19 6.3E-06 44.3 9.5 73 375-475 95-168 (168)
136 2ccw_A Azurin II, AZN-2; elect 94.5 0.13 4.3E-06 43.4 8.0 86 374-474 19-128 (129)
137 1nwp_A Azurin; electron transp 94.2 0.15 5.2E-06 42.8 7.8 92 374-473 19-127 (128)
138 3fsa_A Azurin; copper, cupredo 91.5 0.73 2.5E-05 38.2 8.0 94 374-473 19-124 (125)
139 3isy_A Bsupi, intracellular pr 83.2 9.2 0.00031 31.3 9.7 71 164-235 16-101 (120)
140 1cyx_A CYOA; electron transpor 79.2 2 6.7E-05 38.9 4.6 73 374-474 42-115 (205)
141 3isy_A Bsupi, intracellular pr 73.7 10 0.00034 31.1 7.1 62 14-75 21-99 (120)
142 2gsm_B Cytochrome C oxidase su 70.9 5 0.00017 37.8 5.3 76 373-476 171-247 (262)
143 3hb3_B Cytochrome C oxidase su 65.2 16 0.00055 35.0 7.6 77 373-477 189-266 (298)
144 2r39_A FIXG-related protein; s 61.2 19 0.00064 29.2 6.4 46 167-222 34-81 (118)
145 1cyx_A CYOA; electron transpor 60.6 27 0.00093 31.4 7.8 73 6-92 42-115 (205)
146 1v54_B Cytochrome C oxidase po 57.0 12 0.0004 34.5 4.9 77 373-477 140-217 (227)
147 1xwv_A DER F II; beta sheets, 54.1 19 0.00064 29.7 5.3 58 8-65 28-93 (129)
148 2gsm_B Cytochrome C oxidase su 51.7 41 0.0014 31.5 7.8 73 6-93 172-246 (262)
149 2f1e_A Protein APAG; APAG prot 50.9 14 0.00046 30.7 3.8 48 15-62 33-86 (127)
150 1nep_A EPV20, BNPC2, epididyma 49.3 23 0.00078 29.3 5.1 58 8-65 29-95 (130)
151 3hb3_B Cytochrome C oxidase su 48.9 52 0.0018 31.4 8.1 76 5-94 189-265 (298)
152 1xvs_A Protein APAG; MCSG APC2 48.3 14 0.00046 30.6 3.4 56 15-70 32-95 (126)
153 1xq4_A Protein APAG; all beta 46.1 17 0.00059 30.5 3.7 56 15-70 37-100 (139)
154 1tza_A APAG protein, SOR45; st 42.5 15 0.00052 30.6 2.8 56 15-70 32-95 (134)
155 1fft_B Ubiquinol oxidase; elec 42.2 22 0.00076 34.3 4.4 73 374-474 152-225 (315)
156 2p9r_A Alpha-2-M, alpha-2-macr 36.9 26 0.00088 27.3 3.3 68 162-235 13-84 (102)
157 2wtp_A ORF131 protein, CZCE; m 36.8 17 0.00058 30.1 2.2 24 158-181 71-94 (131)
158 2h7w_A Chagasin; beta-strands, 36.6 1.5E+02 0.005 24.4 8.0 65 4-71 32-104 (131)
159 1x9u_A Umecyanin; cupredoxin, 36.1 36 0.0012 27.5 4.1 34 444-477 73-107 (116)
160 3idu_A Uncharacterized protein 35.9 1.8E+02 0.0061 23.7 9.1 66 161-235 28-96 (127)
161 1v54_B Cytochrome C oxidase po 35.8 84 0.0029 28.6 7.1 74 5-93 140-215 (227)
162 1x9u_A Umecyanin; cupredoxin, 33.6 35 0.0012 27.6 3.7 35 60-95 72-107 (116)
163 1jer_A Cucumber stellacyanin; 30.1 70 0.0024 26.7 5.0 34 444-477 76-110 (138)
164 2xzz_A Protein-glutamine gamma 29.5 50 0.0017 26.0 3.8 51 14-70 23-78 (102)
165 3e8v_A Possible transglutamina 28.6 1.5E+02 0.0052 22.2 6.1 45 189-233 4-48 (82)
166 1ws8_A Mavicyanin; oxidized fo 27.9 62 0.0021 25.8 4.2 33 444-476 73-105 (109)
167 2r5o_A Putative ATP binding co 27.4 1.4E+02 0.0048 26.0 6.9 85 139-235 52-145 (188)
168 1yew_A Particulate methane mon 26.6 1.1E+02 0.0039 29.7 6.4 16 49-64 319-334 (382)
169 2yev_B Cytochrome C oxidase su 32.1 14 0.00048 36.1 0.0 77 374-478 142-219 (337)
170 3rfr_A PMOB; membrane, oxidore 25.3 1.2E+02 0.0042 29.8 6.4 49 14-64 301-366 (419)
171 2c34_A ICP, inhibitor of cyste 23.7 2.8E+02 0.0095 22.1 7.5 66 4-70 14-88 (116)
172 2cio_B Inhibitor of cysteine p 21.9 2.6E+02 0.009 22.4 7.0 30 4-33 12-41 (121)
173 1xvs_A Protein APAG; MCSG APC2 21.6 1.3E+02 0.0043 24.7 4.9 51 167-220 31-85 (126)
174 3es6_B Prolactin-inducible pro 21.3 1.7E+02 0.0059 23.5 5.7 54 8-64 17-74 (118)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=2.9e-96 Score=791.34 Aligned_cols=475 Identities=29% Similarity=0.538 Sum_probs=371.0
Q ss_pred CCCCCeEEEecCCEEEEEEEECCC-CCeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEecCch
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLD-EPLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYFPSIN 78 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~ 78 (521)
++|||+|||++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ ||+|+||++|+|+|++ +++||||||||.+
T Consensus 30 ~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~-~~~GT~wYHsH~~ 108 (552)
T 1aoz_A 30 QFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLG 108 (552)
T ss_dssp BSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEEECST
T ss_pred ccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEEC-CCCEEEEEEECch
Confidence 589999999999999999999997 999999999999988999999998 9999999999999997 8899999999999
Q ss_pred hhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEEEcCcCCCCCCC-----
Q 009960 79 FQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQM----- 153 (521)
Q Consensus 79 ~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~----- 153 (521)
.|+++||+|+|||+++.....++ ..|+|++|+|+||+++...++...+.....+..+.++.+||||+..+.|..
T Consensus 109 ~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~c~~~~~~~ 187 (552)
T 1aoz_A 109 MQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYD 187 (552)
T ss_dssp TTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGC
T ss_pred hHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCccccCcccCcccc
Confidence 99999999999999976544455 347899999999999887665443333222233467899999999875421
Q ss_pred ------C------CCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEE
Q 009960 154 ------T------REPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVT 221 (521)
Q Consensus 154 ------~------~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~ 221 (521)
+ ...+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++++.|+|||||||+|+
T Consensus 188 ~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~ 267 (552)
T 1aoz_A 188 SNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLIT 267 (552)
T ss_dssp TTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEE
T ss_pred cccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEE
Confidence 1 1234899999999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCCCcceEEEeccccccCCCCCCceeEEEEEeCCCCCCC--CCCCCCCCCCCCcccccccccccccccccCCCCCCCC
Q 009960 222 A-DQNEADYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQV--TGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQ 298 (521)
Q Consensus 222 ~-~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~--~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~ 298 (521)
+ ++.+|+|||++....... ......|+|+|.+..... ..+.|..|...+....... .+. .+....+.+.|
T Consensus 268 ~~~~~~g~y~i~~~~~~~~~---~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~--~l~-~l~~~~~~~~~- 340 (552)
T 1aoz_A 268 TDQNPSENYWVSVGTRARHP---NTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNF--TYR-ITAAMGSPKPP- 340 (552)
T ss_dssp CCSCTTCCEEEEEEEESSCC---CSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHH--HTT-CCBCTTCCCCC-
T ss_pred cCCCCCCCEEEEEEcccCCC---CCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccc--ccc-ccccCCCCCCC-
Confidence 9 556899999998653211 245678999998765311 1122222222222111000 010 11100011111
Q ss_pred ccccccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCC----------CCCCCCc
Q 009960 299 GTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPT----------NSVNDEA 368 (521)
Q Consensus 299 ~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~----------~p~~~~~ 368 (521)
...++++.|.......++...|+|||++|..+..|+|++.+. +++++|+.++... .+.+...
T Consensus 341 -------~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~-~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~ 412 (552)
T 1aoz_A 341 -------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKY-NLLHAFDQNPPPEVFPEDYDIDTPPTNEKT 412 (552)
T ss_dssp -------SSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHT-TCTTSSCCSCCCSCCCTTCCTTSCCCCTTC
T ss_pred -------CCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhh-cCccccccCCCccccccccccccccccccc
Confidence 235677777654322345668999999999899998877654 5566665432211 1112334
Q ss_pred ccceeEEecCCCcEEEEEEEcCCC------CccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEE
Q 009960 369 TRGVSVVTGNHKGWIELVFNNNLD------VIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTA 442 (521)
Q Consensus 369 ~~~~~~~~~~~g~~v~~vi~N~~~------~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~ 442 (521)
+.++.++.++.|++|+|+|+|.+. +.||||||||+||||++|.|.|++.....+|+.+|+|||||.|+++||++
T Consensus 413 ~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~ 492 (552)
T 1aoz_A 413 RIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTA 492 (552)
T ss_dssp EEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEE
T ss_pred cccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEE
Confidence 567788899999999999999874 46999999999999999989888744557899999999999999999999
Q ss_pred EEEEecCCeeeEEeecchhhhhccceEEEEEeCCCCCCCCCCCCCCChhcccccc
Q 009960 443 VYAFLDNPGMWNLRSQLLQNWFLGQELYIRVHNSDPNPAKERPPPENLLLCGQCK 497 (521)
Q Consensus 443 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~ 497 (521)
|||+|||||.|+|||||++|++.|||++|.|... ...++|++++.|+.++
T Consensus 493 Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C~~~~ 542 (552)
T 1aoz_A 493 IRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGGTA 542 (552)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHHHH
T ss_pred EEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhhhccC
Confidence 9999999999999999999999999999977532 2455899999998765
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.1e-93 Score=765.37 Aligned_cols=452 Identities=23% Similarity=0.354 Sum_probs=352.7
Q ss_pred CCCCCeEEEecCCEEEEEEEECCC-CCeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEecCch
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLD-EPLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYFPSIN 78 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~ 78 (521)
++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ ||||+||++|+|+|++ .++||||||||.+
T Consensus 94 ~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~-~q~GT~WYHsH~~ 172 (580)
T 3sqr_A 94 TVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV-TQYGTTWYHSHFS 172 (580)
T ss_dssp BSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CCCEEEEEEECST
T ss_pred ccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccccCCCCCCCeEEEEEEC-CCCcceEEeeccc
Confidence 689999999999999999999997 899999999999989999999998 9999999999999997 6899999999999
Q ss_pred hhhcCCceecEEEeCCCCCCCCCCCCCcce-eEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEEEcCcCCCCCCC----
Q 009960 79 FQKAGGGFGPIRVNNRIVISVPFPKPEAEF-DLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQM---- 153 (521)
Q Consensus 79 ~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~---- 153 (521)
.|+++||+|+|||+++.. .+| |.|+ +|+|+||+++...++...... +..+.++.+||||+..+.|..
T Consensus 173 ~q~~~GL~G~lIV~~p~~--~~y---D~d~~~l~l~Dw~~~~~~~~~~~~~~---~~~~~~d~~liNG~~~~~c~~~~~~ 244 (580)
T 3sqr_A 173 LQYGDGLFGPLIINGPAT--ADY---DEDVGVIFLQDWAHESVFEIWDTARL---GAPPALENTLMNGTNTFDCSASTDP 244 (580)
T ss_dssp TGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHHHHHHTT---SCCCCBSEEEETTBCCCCCTTCCCT
T ss_pred ccccCcCEEEEEeeCccc--CCC---CccceEEEEEEEecCCHHHHHHHHhc---cCCCCCceEEECCcccCCCcccccc
Confidence 999999999999998653 234 8888 999999999988776544332 235678999999998876532
Q ss_pred ----CCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCCCCcce
Q 009960 154 ----TREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADY 229 (521)
Q Consensus 154 ----~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~ 229 (521)
....+.++|++|++|||||||+|....+.|+|+||+|+|||+||.+++|+.+++|.|+|||||||+|++++.+|+|
T Consensus 245 ~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y 324 (580)
T 3sqr_A 245 NCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNY 324 (580)
T ss_dssp TBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEE
T ss_pred ccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeE
Confidence 2356899999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred EEEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccc-cccccCCCCCCCCccccccccCc
Q 009960 230 YIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVR-WNLTAGAARPNPQGTFNVSNVTL 308 (521)
Q Consensus 230 ~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~-~~l~~~~~~p~p~~~~~~~~~~~ 308 (521)
|||+.....+..........|||+|.++... .|..+.....+ .+.+.. ..|.+..+.+.|. ..
T Consensus 325 ~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~~~~~~----~~~~~~~~~L~P~~~~~~~~--------~~ 388 (580)
T 3sqr_A 325 WIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVGTTPRG----TCEDEPVASLVPHLALDVGG--------YS 388 (580)
T ss_dssp EEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCCCCCCC----CSCCSCGGGCCBSSCCBCCS--------EE
T ss_pred EEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCCCCccc----hhhcccccccccCCCCCCCC--------cc
Confidence 9999876544221234578999999875421 12211111111 011100 1233322222221 12
Q ss_pred ceEEEEeccccccCCceEEEEccEEee-cCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEec----CCCcEE
Q 009960 309 SQTFILQGSKAEISGWPRYVINNVSYL-TLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTG----NHKGWI 383 (521)
Q Consensus 309 ~~~~~l~~~~~~~~g~~~~~iNg~~f~-~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~----~~g~~v 383 (521)
+.++.+... .++...|+|||.+|. .++.|+|++.+. |. .+ ......++.+ +.|++|
T Consensus 389 ~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~----g~--~~----------~~~~~~~~~~~~~~~~~~~V 449 (580)
T 3sqr_A 389 LVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFN----NE--TI----------FPTEYNVVALEQTNANEEWV 449 (580)
T ss_dssp EEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHT----TC--CC----------CCGGGCEEEECC----CCEE
T ss_pred ceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhc----CC--cc----------CCCCcceeecccccCCCcEE
Confidence 233333321 245678999999997 468898765432 10 00 1123344555 469999
Q ss_pred EEEEEcCC--CCccceeecCcceEEEeeccccCCCCC-CCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeEEeecch
Q 009960 384 ELVFNNNL--DVIDSWHLDGFGFHVVGFGIGEWAPES-RSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWNLRSQLL 460 (521)
Q Consensus 384 ~~vi~N~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~~-~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil 460 (521)
||+|+|.+ .+.||||||||+||||++|.|.|+++. ...+|+.||++||||.|+++||++|||++||||+|+|||||+
T Consensus 450 eiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~ 529 (580)
T 3sqr_A 450 VYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIA 529 (580)
T ss_dssp EEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSH
T ss_pred EEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcH
Confidence 99999998 889999999999999999999998654 367999999999999999999999999999999999999999
Q ss_pred hhhhccceEEEEEeCCCCCCCCCCCCCCC-hhccccccc
Q 009960 461 QNWFLGQELYIRVHNSDPNPAKERPPPEN-LLLCGQCKF 498 (521)
Q Consensus 461 ~H~d~GMm~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~~ 498 (521)
+|++.||+++|.+ .+++.. +...+|++ ...|..+..
T Consensus 530 ~H~~~Gm~~~~~e-~~~~i~-~~~~~~~~~~~~C~~~~~ 566 (580)
T 3sqr_A 530 WHASEGLAMQFVE-SQSSIA-VKMTDTAIFEDTCANWNA 566 (580)
T ss_dssp HHHHTTCEEEEEE-SGGGCC-CCHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCcEEEEE-CHHHHh-hccCCcHHHHHhhHHHhh
Confidence 9999999999966 444442 22224444 678976654
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.2e-91 Score=741.26 Aligned_cols=454 Identities=23% Similarity=0.374 Sum_probs=348.9
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCC-----CeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEe
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDE-----PLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYF 74 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH 74 (521)
++|||+|||++||+|+|+|+|+|++ ++||||||+++..++++||++++ ||+|+||++|+|+|++++++||||||
T Consensus 30 ~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYH 109 (499)
T 3pxl_A 30 VTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYH 109 (499)
T ss_dssp BSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEE
T ss_pred cccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeee
Confidence 6899999999999999999999974 79999999999989999999998 99999999999999987889999999
Q ss_pred cCchhhhcCCceecEEEeCCCCC-CCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEEEcCcCCCCCCC
Q 009960 75 PSINFQKAGGGFGPIRVNNRIVI-SVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQM 153 (521)
Q Consensus 75 ~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~ 153 (521)
||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++.... .+ +....++++||||+++..|..
T Consensus 110 sH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~------~~--~~p~~~d~~liNG~~~~~~~~ 181 (499)
T 3pxl_A 110 SHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL------GP--RFPGGADATLINGKGRAPSDS 181 (499)
T ss_dssp ECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT------SC--SSCSSCSEEEETTBCCCTTCT
T ss_pred ccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc------cc--CCCCCCcEEEECCCCcCCCCC
Confidence 99999999999999999986532 1234333567899999999976532 11 133478999999998876655
Q ss_pred CCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCCCCcceEEEe
Q 009960 154 TREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIVA 233 (521)
Q Consensus 154 ~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~ 233 (521)
....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+|||||||+|++++.+|+|||++
T Consensus 182 ~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a 261 (499)
T 3pxl_A 182 VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRA 261 (499)
T ss_dssp TCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEE
T ss_pred CCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEE
Confidence 56678999999999999999999999999999999999999999999999999999999999999999998789999999
Q ss_pred ccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCccccccccCcceEEE
Q 009960 234 SPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLSQTFI 313 (521)
Q Consensus 234 ~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~ 313 (521)
.....+... ......|+|+|.++.... +..+..+...+ .. +..|.+....+.|... ....+++++.
T Consensus 262 ~~~~~~~~~-~~~~~~ail~Y~~~~~~~-p~~~~~~~~~~-------~~--~~~L~p~~~~~~p~~~---~~~~~d~~~~ 327 (499)
T 3pxl_A 262 NPNFGNVGF-DGGINSAILRYDGAPAVE-PTTNQTTSVKP-------LN--EVDLHPLVSTPVPGAP---SSGGVDKAIN 327 (499)
T ss_dssp EESSSSCSC-GGGTTEEEEEETTSCSSC-CCCCCCCCSSB-------CC--GGGCCBSSCCCCSSCS---STTCSSEEEE
T ss_pred ecccCcccc-CCCceEEEEEeCCCCCCC-CCCCCCCCCcc-------cc--cccccccccccCCCcc---cCCCCcEEEE
Confidence 764333211 122347999998764311 11111010000 00 1122222211111100 0112456666
Q ss_pred EeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcEEEEEEE---cC
Q 009960 314 LQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFN---NN 390 (521)
Q Consensus 314 l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~vi~---N~ 390 (521)
+...+ ++ ..|+|||++|..++.|+|++.+. +..+.. .......++.++.|++|||+|+ |.
T Consensus 328 l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~----g~~~~~---------~~~~~~~v~~~~~g~~V~ivl~~~~n~ 390 (499)
T 3pxl_A 328 MAFNF---NG-SNFFINGASFVPPTVPVLLQILS----GAQTAQ---------DLLPSGSVYVLPSNASIEISFPATAAA 390 (499)
T ss_dssp CCEEE---CS-SCEEETTBCCCCCSSCHHHHHHT----TCCSTT---------TSSSTTSEEEECTTCEEEEEEECCTTS
T ss_pred EEEEe---cC-cEEEEcCEecCCCCCchhhhhhc----CCcccc---------ccCCCceeEEecCCCEEEEEEecCccc
Confidence 55432 22 27999999999999998877543 221110 0112356788999999999998 66
Q ss_pred CCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCC---CCEEEEEEEecCCeeeEEeecchhhhhccc
Q 009960 391 LDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYP---GGWTAVYAFLDNPGMWNLRSQLLQNWFLGQ 467 (521)
Q Consensus 391 ~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~---~g~v~irf~adnpG~w~~HCHil~H~d~GM 467 (521)
..+.||||||||+|+||++++. ..+|+.+|+|||||.|++ ++|++|||++||||.|+|||||++|++.||
T Consensus 391 ~~~~HP~HLHGh~F~Vl~~~g~-------~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm 463 (499)
T 3pxl_A 391 PGAPHPFHLHGHTFAVVRSAGS-------TVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGF 463 (499)
T ss_dssp CSCSCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTC
T ss_pred CCCCccceecCCcEEEEeccCC-------cccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCC
Confidence 6889999999999999987532 357889999999999997 999999999999999999999999999999
Q ss_pred eEEEEEeCCCCCCCCCCCCC-CChhcccccccCccc
Q 009960 468 ELYIRVHNSDPNPAKERPPP-ENLLLCGQCKFLHLK 502 (521)
Q Consensus 468 m~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~~~~~~ 502 (521)
+++| ++.+++.. +...+| ++..+|..|...+.+
T Consensus 464 ~~~~-~e~~~~~~-~~~~~p~~~~~~C~~~~~~~~~ 497 (499)
T 3pxl_A 464 AVVM-AEDTPDVK-AVNPVPQAWSDLCPTYDALDPN 497 (499)
T ss_dssp EEEE-EESGGGHH-HHSCCCHHHHTHHHHHHTSCGG
T ss_pred cEEE-EEChhHhc-cccCCCHHHHHhhhHhhccCcc
Confidence 9998 56665442 233444 447899888776654
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-91 Score=748.06 Aligned_cols=453 Identities=22% Similarity=0.318 Sum_probs=348.2
Q ss_pred CCCCCeEEEecCCEEEEEEEECCC-CCeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEecCch
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLD-EPLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYFPSIN 78 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~ 78 (521)
++|||+|||++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ ||+|+||++|+|+|++++++||||||||.+
T Consensus 30 ~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~ 109 (534)
T 1zpu_A 30 QFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTD 109 (534)
T ss_dssp BSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSS
T ss_pred ccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCc
Confidence 589999999999999999999998 999999999999888999999998 999999999999999866899999999999
Q ss_pred hhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHHHHhcc--CCCCCCCCCCeEEEcCcCCCCCCCCCC
Q 009960 79 FQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTRSMANT--SLTAYNAIPDVILMNGKGPFGYQMTRE 156 (521)
Q Consensus 79 ~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~liNG~~~~~~~~~~~ 156 (521)
.|+++||+|+|||+++.. ++ .+|+|++|+|+||+++...++...+.. ...+..+.++.+||||+..
T Consensus 110 ~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~~-------- 177 (534)
T 1zpu_A 110 GQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMN-------- 177 (534)
T ss_dssp SGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBSS--------
T ss_pred ccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCCc--------
Confidence 999999999999998753 33 458999999999999988776543221 1234556889999999987
Q ss_pred CceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCCC-CcceEEEecc
Q 009960 157 PESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQN-EADYYIVASP 235 (521)
Q Consensus 157 ~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~~-~g~~~i~~~~ 235 (521)
+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|..+++|.|+|||||||+|++++. .++|||++..
T Consensus 178 -~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~ 256 (534)
T 1zpu_A 178 -LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKF 256 (534)
T ss_dssp -CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEE
T ss_pred -eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEec
Confidence 89999999999999999999999999999999999999999999999999999999999999999864 4799999875
Q ss_pred ccccC---CCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCccccccccCcceEE
Q 009960 236 KLIST---NDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLSQTF 312 (521)
Q Consensus 236 ~~~~~---~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~ 312 (521)
...+. .........++|+|+++... |..+....+... ..+. .+.+....+.+ ..+++++
T Consensus 257 ~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~~~~~~~~---~~~~--~l~p~~~~~~~--------~~~~~~~ 318 (534)
T 1zpu_A 257 DDTMLDVIPSDLQLNATSYMVYNKTAAL-----PTQNYVDSIDNF---LDDF--YLQPYEKEAIY--------GEPDHVI 318 (534)
T ss_dssp CGGGSSSCCTTCCCEEEEEEESCTTSCB-----CCCCCCSCSSCS---CCGG--GCCBSSCCCCC--------CSCSEEE
T ss_pred cccccccCCCCCCcceEEEEEeCCCCCC-----CCCCcccccccc---cccc--cceeCCCCCCC--------CCCCeEE
Confidence 43211 11234567899999875421 110000000000 0110 11111111111 1255677
Q ss_pred EEeccccc-cCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcEEEEEEEcCC
Q 009960 313 ILQGSKAE-ISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFNNNL 391 (521)
Q Consensus 313 ~l~~~~~~-~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~vi~N~~ 391 (521)
.+...+.. .++...|+|||++|..++.|+|++.+. .+.+. .++. ....++..+.++.|++|+|+|+|.+
T Consensus 319 ~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~---~~~~~-----~~~~--~~~~~~~~~~~~~g~~v~ivi~N~~ 388 (534)
T 1zpu_A 319 TVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLS---SGDQA-----NNSE--IYGSNTHTFILEKDEIVEIVLNNQD 388 (534)
T ss_dssp EEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTT---SGGGT-----TCGG--GGCSSSCEEEECTTCEEEEEEEECS
T ss_pred EEEEEeeccCCceeEEEECCCcccCCCCCceeeecc---cCccc-----CCCc--ccCCCceEEEeCCCCEEEEEEeCCC
Confidence 66554321 244567999999999999998876543 11110 0111 1122466788999999999999999
Q ss_pred CCccceeecCcceEEEeeccc----------cCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeEEeecchh
Q 009960 392 DVIDSWHLDGFGFHVVGFGIG----------EWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWNLRSQLLQ 461 (521)
Q Consensus 392 ~~~HP~HlHG~~F~Vl~~g~g----------~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~ 461 (521)
.+.||||||||+||||+++.+ .|++.....+ ..+|+|||||.|++++|++|||++||||.|+|||||++
T Consensus 389 ~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~ 467 (534)
T 1zpu_A 389 TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEW 467 (534)
T ss_dssp SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHH
T ss_pred CCCCCeEecCCceEEEeecCCccccccCcccccCccccccc-cCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchh
Confidence 999999999999999999864 4443322222 46899999999999999999999999999999999999
Q ss_pred hhhccceEEEEEeCCCCCCCCC--CCCCCC-hhcccccc
Q 009960 462 NWFLGQELYIRVHNSDPNPAKE--RPPPEN-LLLCGQCK 497 (521)
Q Consensus 462 H~d~GMm~~~~V~~~~~~~~~~--~~~p~~-~~~c~~~~ 497 (521)
|++.|||++|.+.. ++.. +. ..+|++ .+.|..+.
T Consensus 468 H~~~GM~~~~~~~~-~~~~-~~~~~~~p~~~~~~C~~~~ 504 (534)
T 1zpu_A 468 HLLQGLGLVLVEDP-FGIQ-DAHSQQLSENHLEVCQSCS 504 (534)
T ss_dssp HHHTTCEEEEEECH-HHHH-HCGGGSCCHHHHHHHHHTT
T ss_pred HhhcCCeEEEEECc-cccc-cccccCCChhHhhhhhccC
Confidence 99999999997753 3222 22 445544 67885553
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.6e-91 Score=740.57 Aligned_cols=451 Identities=23% Similarity=0.359 Sum_probs=343.3
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCC-----CeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEe
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDE-----PLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYF 74 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH 74 (521)
++|||+|||++||+|+|+|+|+|++ ++||||||+++.+++++||++++ ||+|+||++|+|+|++++++||||||
T Consensus 31 ~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYH 110 (495)
T 3t6v_A 31 TFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYH 110 (495)
T ss_dssp SSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEE
T ss_pred cccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEeCCCCceeeee
Confidence 6899999999999999999999974 79999999999988999999998 99999999999999987889999999
Q ss_pred cCchhhhcCCceecEEEeCCCCC-CCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEEEcCcCCCCCCC
Q 009960 75 PSINFQKAGGGFGPIRVNNRIVI-SVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQM 153 (521)
Q Consensus 75 ~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~ 153 (521)
||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++....+ . + +....+|++||||+++..|..
T Consensus 111 sH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~----~-~--~~p~~~d~~liNG~g~~~~~~ 183 (495)
T 3t6v_A 111 SHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM----G-A--GGAITADSTLIDGLGRTHVNV 183 (495)
T ss_dssp ECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----C-S--SSCCCCSEEEETTBCCBSSSC
T ss_pred ccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----c-c--CCCCCCcEEEECCcCcCCCCc
Confidence 99999999999999999986532 12343335678999999999876432 1 1 133478999999998755443
Q ss_pred -CCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCCCCcceEEE
Q 009960 154 -TREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIV 232 (521)
Q Consensus 154 -~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~ 232 (521)
....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+++|.|+|||||||+|++++++|+|||+
T Consensus 184 ~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~ 263 (495)
T 3t6v_A 184 AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIR 263 (495)
T ss_dssp CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEE
T ss_pred ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEEEE
Confidence 3456899999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred eccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCccccccccCcceEE
Q 009960 233 ASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLSQTF 312 (521)
Q Consensus 233 ~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~ 312 (521)
+.....+... ......|+|+|+++.... +....+.. .. .... +..|.+....+.|... ....+++++
T Consensus 264 a~~~~~~~~~-~~~~~~ail~Y~~~~~~~--p~~~~~~~-~~----~~~~--~~~L~p~~~~~~p~~~---~~~~~d~~~ 330 (495)
T 3t6v_A 264 ANPNSGGEGF-DGGINSAILRYDGATTAD--PVTVASTV-HT----KCLI--ETDLHPLSRNGVPGNP---HQGGADCNL 330 (495)
T ss_dssp EEESSSSCSC-GGGTTEEEEEETTSCSSC--CCCCCCSS-CS----SBCC--GGGCCBSSCCCCSSCS---STTCSSEEE
T ss_pred EecccCcccc-CCCceEEEEEECCCCCCC--CCCCCCCC-Cc----cccc--cccccccccccCCCcc---CCCCCcEEE
Confidence 9764333211 112347999998764311 11000000 00 0000 1122222111111100 011245566
Q ss_pred EEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcEEEEEEE-cCC
Q 009960 313 ILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFN-NNL 391 (521)
Q Consensus 313 ~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~vi~-N~~ 391 (521)
.+.... ++ ..|+|||++|..++.|+|++.+. +.++.. .......++.++.|++|||+|+ |..
T Consensus 331 ~l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~----g~~~~~---------~~~~~~~v~~~~~g~~V~ivl~~n~~ 393 (495)
T 3t6v_A 331 NLSLGF---AC-GNFVINGVSFTPPTVPVLLQICS----GANTAA---------DLLPSGSVISLPSNSTIEIALPAGAA 393 (495)
T ss_dssp ECCEEE---ET-TEEEETTBCCCCCSSCHHHHHHT----TCCSST---------TSSSTTSEEEECTTCEEEEEEECCSS
T ss_pred EEEEEe---cC-cEEEEcCEecCCCCCcchhhhhc----CCcCcc---------cccCCcceEEecCCCEEEEEEccCCC
Confidence 554432 12 27999999999999998877543 222111 0112345788999999999998 677
Q ss_pred CCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCC-CCEEEEEEEecCCeeeEEeecchhhhhccceEE
Q 009960 392 DVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYP-GGWTAVYAFLDNPGMWNLRSQLLQNWFLGQELY 470 (521)
Q Consensus 392 ~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~-~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~ 470 (521)
.+.||||||||+|+||++++. ..+|+.+|+|||||.|++ |+|++|||++||||.|+|||||++|++.||+++
T Consensus 394 ~~~HP~HLHGh~F~vl~~~g~-------~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~ 466 (495)
T 3t6v_A 394 GGPHPFHLHGHDFAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIV 466 (495)
T ss_dssp SCCCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEE
T ss_pred CCCcceeecCCcEEEEecCCC-------CCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEE
Confidence 899999999999999987542 257889999999999997 899999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCCCCCCCC-hhcccccc
Q 009960 471 IRVHNSDPNPAKERPPPEN-LLLCGQCK 497 (521)
Q Consensus 471 ~~V~~~~~~~~~~~~~p~~-~~~c~~~~ 497 (521)
| ++.+++.. +...+|++ ..+|..|.
T Consensus 467 ~-~e~~~~~~-~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 467 F-AEDIPNTA-SANPVPEAWSNLCPSYD 492 (495)
T ss_dssp E-EETHHHHH-HHCCCCHHHHHHHHHHH
T ss_pred E-EEChhHhc-cccCCCHHHHHHhhHhh
Confidence 8 55555432 23344544 78996654
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1e-90 Score=742.12 Aligned_cols=455 Identities=22% Similarity=0.322 Sum_probs=346.7
Q ss_pred CCCCCeEEEecCCEEEEEEEECCC-----CCeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEe
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLD-----EPLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYF 74 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~-----~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH 74 (521)
++|||+|||++||+|+|+|+|+|+ +++||||||+++.+++++||+|++ ||+|+||++|+|+|++++++||||||
T Consensus 51 ~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH 130 (521)
T 1v10_A 51 TTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYH 130 (521)
T ss_dssp SSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEE
T ss_pred ccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEE
Confidence 689999999999999999999998 999999999999888999999998 99999999999999987899999999
Q ss_pred cCchhhhcCCceecEEEeCCCCC-CCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEEEcCcCCCCCC-
Q 009960 75 PSINFQKAGGGFGPIRVNNRIVI-SVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQ- 152 (521)
Q Consensus 75 ~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~- 152 (521)
||.+.|+++||+|+|||+++.+. +.+|+..++|++|+++||+++...++... .+ +..+.++.+||||+.++.|.
T Consensus 131 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~~--~~--~~~~~~d~~liNG~~~~~~~~ 206 (521)
T 1v10_A 131 SHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFPN--PN--KAPPAPDTTLINGLGRNSANP 206 (521)
T ss_dssp ECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-----------CCCSCCSEEEETTBCCCSSCG
T ss_pred eccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHHHhhc--cC--CCCCCCCEEEECCcccCCCCC
Confidence 99999999999999999986432 22343334799999999999877655321 11 23457899999999886554
Q ss_pred CCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCCCCcceEEE
Q 009960 153 MTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIV 232 (521)
Q Consensus 153 ~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~ 232 (521)
.....+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|..++++.|+|||||||+|++++.+|+|||+
T Consensus 207 ~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~ 286 (521)
T 1v10_A 207 SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIR 286 (521)
T ss_dssp GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEE
T ss_pred CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeee
Confidence 33455899999999999999999999999999999999999999999999999999999999999999999778999999
Q ss_pred eccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCccccccccCcceEE
Q 009960 233 ASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLSQTF 312 (521)
Q Consensus 233 ~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~ 312 (521)
+.....+... ......++|+|++.....+.. +. ....+.+ . ..+.+....+.|... .....++++
T Consensus 287 ~~~~~~~~~~-~~~~~~ail~y~~~~~~~p~~-~~-~~~~~~~-------~--~~l~p~~~~~~p~~~---~~~~~~~~~ 351 (521)
T 1v10_A 287 ANPSNGRNGF-TGGINSAIFRYQGAAVAEPTT-SQ-NSGTALN-------E--ANLIPLINPGAPGNP---VPGGADINL 351 (521)
T ss_dssp EEESSSSCSC-GGGTTEEEEEETTCCSCCCCC-CC-CCSCBCC-------G--GGCCBSSCCCCSSCS---STTCSSEEE
T ss_pred eccccccccC-CCCceeEEEEECCCCCCCCCC-CC-Ccccccc-------h--hhcccCCcccCCCcc---cCCcceEEE
Confidence 9765322111 012236999998764321100 00 0001110 0 122222111112110 001234555
Q ss_pred EEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcEEEEEEEcCCC
Q 009960 313 ILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFNNNLD 392 (521)
Q Consensus 313 ~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~vi~N~~~ 392 (521)
.+.... .+....|+|||++|..+..|+|++.+. +.++.. ....++.++.++.|++|||+|+| .
T Consensus 352 ~l~~~~--~~~~~~~~iNg~~~~~~~~P~l~~~~~----g~~~~~---------~~~~~~~~~~v~~g~~vei~l~N--~ 414 (521)
T 1v10_A 352 NLRIGR--NATTADFTINGAPFIPPTVPVLLQILS----GVTNPN---------DLLPGGAVISLPANQVIEISIPG--G 414 (521)
T ss_dssp ECCEEC--CSSSSCCEESSCCCCCCSSCHHHHHHH----TCCCGG---------GSSSTTTEEEECTTCEEEEEEEC--C
T ss_pred EEEEec--CCceeEEEECCCcccCCCCchhhhhhc----CCcccc---------cCCCCceEEEecCCCEEEEEEcC--C
Confidence 554321 112247999999999888898776543 111100 11235677899999999999999 7
Q ss_pred CccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEe-CCCCEEEEEEEecCCeeeEEeecchhhhhccceEEE
Q 009960 393 VIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQV-YPGGWTAVYAFLDNPGMWNLRSQLLQNWFLGQELYI 471 (521)
Q Consensus 393 ~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v-p~~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~ 471 (521)
+.||||||||+||||+++++. .+|+.+|+|||||.| ++++|++|||++||||.|+|||||++|++.|||++|
T Consensus 415 ~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~ 487 (521)
T 1v10_A 415 GNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVF 487 (521)
T ss_dssp BSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEE
T ss_pred CCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEE
Confidence 899999999999999998753 467889999999999 899999999999999999999999999999999999
Q ss_pred EEeCCCCCCCCCCCCC-CChhcccccccCc
Q 009960 472 RVHNSDPNPAKERPPP-ENLLLCGQCKFLH 500 (521)
Q Consensus 472 ~V~~~~~~~~~~~~~p-~~~~~c~~~~~~~ 500 (521)
.|...+ . ++..++| ++.+.|..+....
T Consensus 488 ~v~~~~-~-~~~~~~p~~~~~~C~~~~~~~ 515 (521)
T 1v10_A 488 AEDIPN-I-PIANAISPAWDDLCPKYNANN 515 (521)
T ss_dssp EESGGG-H-HHHSCCCHHHHTHHHHHTTCC
T ss_pred EECCcc-h-hhccCCChHHhhhchhhhccC
Confidence 885433 2 2344455 4589998887654
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=6.1e-90 Score=733.65 Aligned_cols=452 Identities=26% Similarity=0.425 Sum_probs=346.9
Q ss_pred CCCCCeEEEecCCEEEEEEEECCC-----CCeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEe
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLD-----EPLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYF 74 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~-----~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH 74 (521)
++ ||+|||++||+|+|+|+|+|+ +++||||||+++.+++++||+|++ ||+|+||++|+|+|++++++||||||
T Consensus 31 ~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~GT~wYH 109 (503)
T 1hfu_A 31 VH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYH 109 (503)
T ss_dssp BS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCEEEEEE
T ss_pred cc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeEEEEEEeCCCCccEEEE
Confidence 57 999999999999999999998 999999999999888999999998 99999999999999987889999999
Q ss_pred cCchhhhcCCceecEEEeCCCCC-CCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEEEcCcCCCCCCC
Q 009960 75 PSINFQKAGGGFGPIRVNNRIVI-SVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQM 153 (521)
Q Consensus 75 ~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~ 153 (521)
||.+.|+++||+|+|||+++.+. +.+|+..++|++|+|+||+++...++. ..+.++.+||||+.++.|..
T Consensus 110 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~---------~~~~~d~~liNG~~~~~~~~ 180 (503)
T 1hfu_A 110 SHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ---------GAAQPDATLINGKGRYVGGP 180 (503)
T ss_dssp ECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC------------CCSEEEETTBCCBTTCC
T ss_pred ecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---------CCCCCCEEEECcccccCCCC
Confidence 99999999999999999986432 223433347999999999998765432 11467899999999876665
Q ss_pred CCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCCCCcceEEEe
Q 009960 154 TREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIVA 233 (521)
Q Consensus 154 ~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~ 233 (521)
....+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|+.++++.|+|||||||+|++++.+|+|||++
T Consensus 181 ~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a 260 (503)
T 1hfu_A 181 AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRA 260 (503)
T ss_dssp CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEE
T ss_pred CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEEcccceEEEEEEcCCCccceeeee
Confidence 56678999999999999999999999999999999999999999999999999999999999999999997789999999
Q ss_pred ccccccCC---CCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCccccccccCcce
Q 009960 234 SPKLISTN---DSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLSQ 310 (521)
Q Consensus 234 ~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~ 310 (521)
........ ........++|+|.+..... +..+..+...+++ . ..+.+....+.|... .....++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~-p~~~~~~~~~~l~----~-----~~l~p~~~~~~p~~~---~~~~~~~ 327 (503)
T 1hfu_A 261 QPNKGRNGLAGTFANGVNSAILRYAGAANAD-PTTSANPNPAQLN----E-----ADLHALIDPAAPGIP---TPGAADV 327 (503)
T ss_dssp EESSCGGGGGGCCGGGTTEEEEEETTSCSSC-CCCCCCSSCCBCC----G-----GGCBBSSSCSCSSCS---STTCSSE
T ss_pred ccccCCcccccccCCCceEEEEEECCCCCCC-CCCCCCCccCCCc----c-----ccccccCccCCCCcc---cCCcceE
Confidence 76532211 00112336999998764321 1111111111111 0 112222111111110 0012344
Q ss_pred EEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcEEEEEEE-c
Q 009960 311 TFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFN-N 389 (521)
Q Consensus 311 ~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~vi~-N 389 (521)
++.+.... ++. .|+|||++|..+..|+|++.+. +.++.. ....++.++.++.|++|||+|+ |
T Consensus 328 ~~~l~~~~---~~~-~~~iNg~~~~~~~~P~l~~~~~----g~~~~~---------~~~~~~~~~~v~~g~~vei~l~~n 390 (503)
T 1hfu_A 328 NLRFQLGF---SGG-RFTINGTAYESPSVPTLLQIMS----GAQSAN---------DLLPAGSVYELPRNQVVELVVPAG 390 (503)
T ss_dssp EEECCEEE---ETT-EEEETTBCCCCCSSCHHHHHHT----TCCSGG---------GSSSTTSEEEECSSCEEEEEEECC
T ss_pred EEEEEeec---cCc-eEEECCCccCCCCCcchhhhhc----CCcccc---------cCCCCceEEEccCCCEEEEEEECC
Confidence 55443321 222 7999999999888898776543 111100 1223567889999999999999 4
Q ss_pred CCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEe-CCCCEEEEEEEecCCeeeEEeecchhhhhccce
Q 009960 390 NLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQV-YPGGWTAVYAFLDNPGMWNLRSQLLQNWFLGQE 468 (521)
Q Consensus 390 ~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v-p~~g~v~irf~adnpG~w~~HCHil~H~d~GMm 468 (521)
...+.||||||||+||||+++++. .+|+.+|.|||||.| ++++|++|||++||||.|+|||||++|++.|||
T Consensus 391 ~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~ 463 (503)
T 1hfu_A 391 VLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLA 463 (503)
T ss_dssp STTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCE
T ss_pred CCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCe
Confidence 558899999999999999998753 367889999999999 999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCCCCCCCCC-CChhcccccccCcc
Q 009960 469 LYIRVHNSDPNPAKERPPP-ENLLLCGQCKFLHL 501 (521)
Q Consensus 469 ~~~~V~~~~~~~~~~~~~p-~~~~~c~~~~~~~~ 501 (521)
++|.|...+ . ++..++| ++.+.|+.+.....
T Consensus 464 ~~~~v~~~~-~-~~~~~~p~~~~~~C~~~~~~~~ 495 (503)
T 1hfu_A 464 IVFAEDMAN-T-VDANNPPVEWAQLCEIYDDLPP 495 (503)
T ss_dssp EEEEECHHH-H-HHHCCCCHHHHHHHHHHHTCCH
T ss_pred EEEEECchh-h-hhccCCChHHhhhccchhhcCC
Confidence 999885433 2 1344456 45899998887643
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=8.3e-89 Score=732.62 Aligned_cols=458 Identities=22% Similarity=0.329 Sum_probs=347.8
Q ss_pred CCCCCeEEEecCCEEEEEEEECC-CCCeeEEecCcCCCCCCCCCCCccc-CcccCC-CCceEEEEEEcceeeeEEEecCc
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNL-DEPLLFTWNGIQQRLNSWQDGVSGT-NCPILP-RKNWTYVFQVKDQIGSFFYFPSI 77 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~p-G~~~~y~f~~~~~~Gt~wYH~H~ 77 (521)
++|||+|||++||+|+|+|+|+| +++++|||||+++.+++++||+|++ ||+|+| |++|+|+|++ .++||||||||.
T Consensus 63 ~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~ 141 (559)
T 2q9o_A 63 NIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHF 141 (559)
T ss_dssp BSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECS
T ss_pred cccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEEC-CCCEEEEEEEcc
Confidence 58999999999999999999999 6899999999999888999999998 999999 9999999997 679999999999
Q ss_pred hhhhcCCceecEEEeCCCCCCCCCCCCCcce-eEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEEEcCcCCCCCCCCCC
Q 009960 78 NFQKAGGGFGPIRVNNRIVISVPFPKPEAEF-DLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTRE 156 (521)
Q Consensus 78 ~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~ 156 (521)
+.|+++||+|+|||+++.. .+| |+|+ +|+|+||+++...++..... .+..+.++.+||||+....|.....
T Consensus 142 ~~q~~~Gl~G~liV~~~~~--~~~---d~d~~~l~l~Dw~~~~~~~~~~~~~---~~~~~~~d~~liNG~~~~~~~~~g~ 213 (559)
T 2q9o_A 142 SAQYGNGVVGTIQINGPAS--LPY---DIDLGVFPITDYYYRAADDLVHFTQ---NNAPPFSDNVLINGTAVNPNTGEGQ 213 (559)
T ss_dssp TTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHHHHHHT---TSCCCCBSEEEETTBCBCTTTCCBC
T ss_pred cchhcCCceEEEEecCCCc--CCC---cccceEEEEeccccCCHHHHhhhhh---cCCCCccceeEECCccccCcCCCCC
Confidence 9999999999999998653 234 7887 99999999998876643222 2244578999999999765544455
Q ss_pred CceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCCCCcceEEEecc-
Q 009960 157 PESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIVASP- 235 (521)
Q Consensus 157 ~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~~- 235 (521)
.+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.++++.|+|||||||+|++++.+|+|||++..
T Consensus 214 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~ 293 (559)
T 2q9o_A 214 YANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFG 293 (559)
T ss_dssp CCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECC
T ss_pred ceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEec
Confidence 6899999999999999999999999999999999999999999999999999999999999999999878999999986
Q ss_pred -ccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcc-cccccccccccccccCCCCCCCCccccccccCcceEEE
Q 009960 236 -KLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLD-FSMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLSQTFI 313 (521)
Q Consensus 236 -~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~-~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~ 313 (521)
...+. ........++|+|.+.... +|..+.....+ .+.+. ..+.+..+.+.|...+ ....++++.
T Consensus 294 ~~~~~~-~~~~~~~~ail~y~~~~~~----~P~~~~~~~~~~~~~~~-----~~l~p~~~~~~p~~~~---~~~~~~~~~ 360 (559)
T 2q9o_A 294 GQAACG-GSLNPHPAAIFHYAGAPGG----LPTDEGTPPVDHQCLDT-----LDVRPVVPRSVPVNSF---VKRPDNTLP 360 (559)
T ss_dssp GGGTTC-CBSSSCCEEEEEETTSCCS----CCCCCCCCCCCCTTCCC-----SCCCBSSCCBCCCTTC---CCCGGGEEE
T ss_pred cccccC-CCCCCceeEEEEECCCCCC----CCCCCCCcCCCcccccc-----cccccCCCCCCCCccc---ccceeEEEE
Confidence 22221 1113356899999876431 12111100000 00000 1122221111111100 111234555
Q ss_pred EeccccccCCceEEEEccEEeec-CCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecC-CCcEEEEEEEcCC
Q 009960 314 LQGSKAEISGWPRYVINNVSYLT-LETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGN-HKGWIELVFNNNL 391 (521)
Q Consensus 314 l~~~~~~~~g~~~~~iNg~~f~~-~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~g~~v~~vi~N~~ 391 (521)
+.... ...+...|+|||++|.. +..|+|.+..... . + ...+..++.++ .++|++|+|+|.+
T Consensus 361 ~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~-~---~------------~~~~~~~~~~~~~~~v~~~vi~n~~ 423 (559)
T 2q9o_A 361 VALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGN-T---S------------YPVSDNIVQVDAVDQWTYWLIENDP 423 (559)
T ss_dssp EEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC-C---C------------CCGGGCEEEECCSSCEEEEEEEECT
T ss_pred EEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCC-c---c------------CCCCceEEEcCCCCEEEEEEEeCCC
Confidence 44321 12345689999999975 4678765543210 0 0 11245566665 4688889999976
Q ss_pred ----CCccceeecCcceEEEeecc---------ccCCCCC-CCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeEEee
Q 009960 392 ----DVIDSWHLDGFGFHVVGFGI---------GEWAPES-RSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWNLRS 457 (521)
Q Consensus 392 ----~~~HP~HlHG~~F~Vl~~g~---------g~~~~~~-~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HC 457 (521)
.+.||||||||+||||+++. |.|++.. ...+|+.+|+|||||.|++++|++|||+|||||.|+|||
T Consensus 424 ~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HC 503 (559)
T 2q9o_A 424 EGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHC 503 (559)
T ss_dssp TSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEE
T ss_pred ccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEe
Confidence 78999999999999999997 6676421 246889999999999999999999999999999999999
Q ss_pred cchhhhhccceEEEEEeCCCCCCCCCCCC--CC-ChhcccccccC
Q 009960 458 QLLQNWFLGQELYIRVHNSDPNPAKERPP--PE-NLLLCGQCKFL 499 (521)
Q Consensus 458 Hil~H~d~GMm~~~~V~~~~~~~~~~~~~--p~-~~~~c~~~~~~ 499 (521)
||++|++.|||++|.|...+ . ++...+ |+ ..++|+.|..-
T Consensus 504 Hil~H~~~GM~~~~~v~~~~-~-~~~~~~~~p~~~~~~C~~~~~~ 546 (559)
T 2q9o_A 504 HIAWHVSGGLSVDFLERPAD-L-RQRISQEDEDDFNRVCDEWRAY 546 (559)
T ss_dssp CCHHHHHTTCEEEEEECHHH-H-GGGCCHHHHHHHHHHHHHHHHH
T ss_pred cchhHhhcCCeEEEEECcch-h-hhccccCCchhhhhhccccccc
Confidence 99999999999999775432 2 223333 44 57899887654
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=6.9e-82 Score=661.66 Aligned_cols=374 Identities=21% Similarity=0.316 Sum_probs=298.5
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEc-ceeeeEEEecCc--
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVK-DQIGSFFYFPSI-- 77 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~-~~~Gt~wYH~H~-- 77 (521)
++|||+|||++||+|+|+|+|+|+++++|||||+++. +++||++ +.|+||++|+|+|+++ +++||||||||.
T Consensus 43 ~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~---~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~ 117 (439)
T 2xu9_A 43 SFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF---LEIPPGESWTYEFTVPKELAGTFWYHPHLHG 117 (439)
T ss_dssp BSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---CCBCTTCEEEEEEECCSSCCEEEEEECCCTT
T ss_pred cccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---ccCCCCCeEEEEEecCCCCCcceEeccCCCC
Confidence 5899999999999999999999999999999999874 5899987 6799999999999985 479999999997
Q ss_pred --hhhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHH---HHHhccCCCCCCCCCCeEEEcCcCCCCCC
Q 009960 78 --NFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKT---RSMANTSLTAYNAIPDVILMNGKGPFGYQ 152 (521)
Q Consensus 78 --~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~liNG~~~~~~~ 152 (521)
+.|+++||+|+|||+++.+.. +....++|++|+++||+++..... ......+ ..++.++|||+..
T Consensus 118 ~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~~~~~~~~~g-----~~~~~~~iNG~~~---- 187 (439)
T 2xu9_A 118 RVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAPHTPMDWMNG-----KEGDLVLVNGALR---- 187 (439)
T ss_dssp SHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECCCCHHHHHHC-----CCCSEEEETTEES----
T ss_pred chHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCCCCccccccC-----CCCCEEEECCccC----
Confidence 479999999999999865321 111348899999999998753100 0000011 2468999999988
Q ss_pred CCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcc-cceeeeeEEecCCcEEEEEEEeCCCCcceEE
Q 009960 153 MTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYT-NQITLRSLDVHVGQSYSVLVTADQNEADYYI 231 (521)
Q Consensus 153 ~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i 231 (521)
|.++|++| +|||||||+|+.+.+.|+|+||+|+||++||+++ +|..++++.|+|||||||+|++++ +|+|+|
T Consensus 188 -----p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l 260 (439)
T 2xu9_A 188 -----PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLL 260 (439)
T ss_dssp -----CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEE
T ss_pred -----CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEE
Confidence 89999999 9999999999999999999999999999999997 899999999999999999999996 899999
Q ss_pred EeccccccCC--------------CCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCC
Q 009960 232 VASPKLISTN--------------DSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNP 297 (521)
Q Consensus 232 ~~~~~~~~~~--------------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p 297 (521)
++.....+.. ........++|+|.+...+ .++|.. +.+....+.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~p~~-------------------l~~~~~l~~~ 319 (439)
T 2xu9_A 261 QALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LPLPKA-------------------LSPFPTLPAP 319 (439)
T ss_dssp EEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CCCCSC-------------------CCCCCCCCCC
T ss_pred EecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--ccCccc-------------------CCCcccCCCC
Confidence 9975432210 0112356788999765321 112210 0000000111
Q ss_pred CccccccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEec
Q 009960 298 QGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTG 377 (521)
Q Consensus 298 ~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 377 (521)
..++++.|.... .+ ..|+|||++|..+..+ +.+
T Consensus 320 ---------~~~r~~~l~~~~---~g-~~~~iNg~~~~~~~~~----------------------------------~~~ 352 (439)
T 2xu9_A 320 ---------VVTRRLVLTEDM---MA-ARFFINGQVFDHRRVD----------------------------------LKG 352 (439)
T ss_dssp ---------SEEEEEEEEEEG---GG-TEEEETTBCCCTTCCC----------------------------------EEE
T ss_pred ---------CcceEEEEEeec---cC-ceEeECCEECCCCCCc----------------------------------eec
Confidence 123677766532 11 3799999998643221 457
Q ss_pred CCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeEEee
Q 009960 378 NHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWNLRS 457 (521)
Q Consensus 378 ~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HC 457 (521)
+.|++++|+|+|.+.+.||||||||+||||+++++++ .+|.|||||.|+++++++|||++||||.|+|||
T Consensus 353 ~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HC 422 (439)
T 2xu9_A 353 QAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHC 422 (439)
T ss_dssp CTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEE
T ss_pred CCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEEC
Confidence 8899999999999999999999999999999987654 268899999999999999999999999999999
Q ss_pred cchhhhhccceEEEEEe
Q 009960 458 QLLQNWFLGQELYIRVH 474 (521)
Q Consensus 458 Hil~H~d~GMm~~~~V~ 474 (521)
||++|++.|||+.++|.
T Consensus 423 Hil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 423 HIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp SSHHHHHTTCEEEEEEC
T ss_pred CcchhhhcCCcEEEEeC
Confidence 99999999999999883
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=1.4e-81 Score=660.17 Aligned_cols=379 Identities=18% Similarity=0.226 Sum_probs=296.0
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCc---
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSI--- 77 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~--- 77 (521)
++|||+|||++||+|+|+|+|+|+++++|||||+++.. .+||+| ||+|+||++|+|+|++++++||||||||.
T Consensus 46 ~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~--~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~ 121 (451)
T 2uxt_A 46 RYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPG--PLMGGP--ARMMSPNADWAPVLPIRQNAATLWYHANTPNR 121 (451)
T ss_dssp SSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCG--GGSCSG--GGCBCTTCEECCEEECCSCSEEEEEEECCTTT
T ss_pred cccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCC--CCCCCC--cCcCCCCCeEEEEEEcCCCCcceEEecCCCCc
Confidence 68999999999999999999999999999999998865 499998 89999999999999986569999999998
Q ss_pred -hhhhcCCceecEEEeCCCCCCCCCCC--CCcceeEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEEEcCcCCCCCCCC
Q 009960 78 -NFQKAGGGFGPIRVNNRIVISVPFPK--PEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMT 154 (521)
Q Consensus 78 -~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~ 154 (521)
+.|+++||+|+|||+++.....+++. .++|++|+++||+++.++++.. ...+. ....++.++|||+..
T Consensus 122 t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~-~~~~~--~~~~~d~~liNG~~~------ 192 (451)
T 2uxt_A 122 TAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY-NEPGS--GGFVGDTLLVNGVQS------ 192 (451)
T ss_dssp HHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC-CCCSS--SCCCCSEEEETTEES------
T ss_pred hhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec-ccccC--CCCcCCEEEECCccc------
Confidence 68999999999999987543333322 5889999999999986544321 01111 234689999999998
Q ss_pred CCCceEEEecCcEEEEEEEecCccceeeEEE-cCceeEEEEecCCcc-cceeeeeEEecCCcEEEEEEEeCCCCcceEEE
Q 009960 155 REPESFTVTKGMTYRFRISNVGSVFSFNFRI-QNHKMVLVETEGSYT-NQITLRSLDVHVGQSYSVLVTADQNEADYYIV 232 (521)
Q Consensus 155 ~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~ 232 (521)
|.++|++| +|||||||+|+.+.+.|+| +||+|+||++||+++ +|..++++.|+|||||||+|++++ ++.|+|+
T Consensus 193 ---p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~ 267 (451)
T 2uxt_A 193 ---PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN-GDEVSIT 267 (451)
T ss_dssp ---CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT-CCCEEEE
T ss_pred ---ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC-CCEEEEE
Confidence 89999999 9999999999999999999 899999999999997 899999999999999999999994 6899999
Q ss_pred eccccccCC-------CCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCccccccc
Q 009960 233 ASPKLISTN-------DSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNVSN 305 (521)
Q Consensus 233 ~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~ 305 (521)
+.......+ ........++++|........ .....| ..|.+....+. .
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p----------------~~L~~~~~~~~--------~ 322 (451)
T 2uxt_A 268 CGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLP----------------MRLLPTEIMAG--------S 322 (451)
T ss_dssp C----------------CCCCSCCEEEEEEECSCCC-----CCC----------------SCSSSSCCCCC--------C
T ss_pred ecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCc----------------cccCCCCCCCC--------C
Confidence 876432111 011223457888875432110 000011 01111110010 1
Q ss_pred cCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcEEEE
Q 009960 306 VTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIEL 385 (521)
Q Consensus 306 ~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 385 (521)
...++++.|.. .|+|||++|..+.. .+.++.|++++|
T Consensus 323 ~~~~~~~~l~~---------~~~iNg~~f~~~~~----------------------------------~~~~~~G~~~~~ 359 (451)
T 2uxt_A 323 PIRSRDISLGD---------DPGINGQLWDVNRI----------------------------------DVTAQQGTWERW 359 (451)
T ss_dssp CSEEEEEEECS---------SSSBTTBCCCTTCC----------------------------------CEEEETTCEEEE
T ss_pred CcceEEEEEee---------EEEECCEeCCCCCC----------------------------------cEEcCCCCEEEE
Confidence 12445666541 58999999864311 145688999999
Q ss_pred EEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCee----eEEeecchh
Q 009960 386 VFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGM----WNLRSQLLQ 461 (521)
Q Consensus 386 vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~----w~~HCHil~ 461 (521)
+|+|. +.||||||||+||||++++.+ +++.+|.|||||.| +++++|+|+|||||. |+|||||++
T Consensus 360 ~l~N~--~~HP~HLHGh~F~Vl~~~G~~--------~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~ 427 (451)
T 2uxt_A 360 TVRAD--EPQAFHIEGVMFQIRNVNGAM--------PFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLE 427 (451)
T ss_dssp EEEEE--EEEEEEETTCEEEEEEETTBC--------CCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHH
T ss_pred EEECC--CCcCeEECCceEEEEeeCCcC--------CCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchh
Confidence 99998 799999999999999997542 45567899999999 999999999999988 999999999
Q ss_pred hhhccceEEEEEeCCC
Q 009960 462 NWFLGQELYIRVHNSD 477 (521)
Q Consensus 462 H~d~GMm~~~~V~~~~ 477 (521)
|++.|||+.|.|...+
T Consensus 428 H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 428 MADRGSIGQLLVNPVP 443 (451)
T ss_dssp HHHTTCEEEEEEECSC
T ss_pred HHhCCCcEEEEEccCc
Confidence 9999999999998654
No 11
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=3.3e-80 Score=648.63 Aligned_cols=380 Identities=20% Similarity=0.265 Sum_probs=294.9
Q ss_pred CCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecC----c
Q 009960 2 FPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPS----I 77 (521)
Q Consensus 2 ~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H----~ 77 (521)
+|||+|||++||+|+|+|+|+|+++++|||||+++ .+++||+|+ |+|+||++|+|+|++++++|||||||| +
T Consensus 35 ~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~--~~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~ 110 (448)
T 3aw5_A 35 VLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDV--NWHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYHPHPHGLT 110 (448)
T ss_dssp EESCEEEEETTCEEEEEEEECSSSCBCEEEETCCC--CHHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEEECCTTTH
T ss_pred ccCceEEEeCCCEEEEEEEECCCCceeEEeCCccC--CCccCCCCC--ccCCCCCEEEEEEEcCCCCCceEeccCCCCch
Confidence 89999999999999999999999999999999987 467999996 999999999999998668999999999 7
Q ss_pred hhhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHHHHh--ccCCCCCCCCCCeEEEcCcCCCCCCCCC
Q 009960 78 NFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTRSMA--NTSLTAYNAIPDVILMNGKGPFGYQMTR 155 (521)
Q Consensus 78 ~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~liNG~~~~~~~~~~ 155 (521)
+.|+++||+|+|||+++... .+++...+|++|+++||+++. +++.... ..+. ....++.++|||+..
T Consensus 111 ~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~--~~~~~~~~liNG~~~------- 179 (448)
T 3aw5_A 111 AKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVYNPTPMEMI--AGFLGNAVLVNGVKD------- 179 (448)
T ss_dssp HHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEECCCCHHHHH--HCCCCSEEEETTEET-------
T ss_pred HHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccccccccccc--cCccccEEEECCccc-------
Confidence 79999999999999997653 222222389999999999876 4321100 0001 123678999999998
Q ss_pred CCceEEEecCcEEEEEEEecCccceeeEEE--cC---ceeEEEEecCCccc-ceeeeeEEecCCcEEEEEEEeCCCCcce
Q 009960 156 EPESFTVTKGMTYRFRISNVGSVFSFNFRI--QN---HKMVLVETEGSYTN-QITLRSLDVHVGQSYSVLVTADQNEADY 229 (521)
Q Consensus 156 ~~p~~~v~~G~~~rlRliNa~~~~~~~~~i--~g---h~~~via~DG~~~~-p~~~d~v~l~pGeR~dv~v~~~~~~g~~ 229 (521)
|.++|++| +|||||||+|+.+.+.|+| +| |+|+||++||++++ |..++++.|+|||||||+|+++ .+.|
T Consensus 180 --p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y 254 (448)
T 3aw5_A 180 --AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVY 254 (448)
T ss_dssp --CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEE
T ss_pred --ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECC--CCce
Confidence 89999999 9999999999999999999 99 99999999999997 9999999999999999999998 3789
Q ss_pred EEEeccccccCC----------CCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCc
Q 009960 230 YIVASPKLISTN----------DSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQG 299 (521)
Q Consensus 230 ~i~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~ 299 (521)
+|++.....+.+ ........++++|.+..... . |. .+ .. +.+ .+.
T Consensus 255 ~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----p~--~L-------~~----lp~---~~~--- 309 (448)
T 3aw5_A 255 LLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAV--P----VE--AL-------SD----PPP---EPP--- 309 (448)
T ss_dssp EEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCC--C----CC--CC-------SC----CCC---CCC---
T ss_pred EEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCC--C----cc--cc-------CC----CCC---CCC---
Confidence 999876532111 11123456778886543211 0 10 00 00 000 010
Q ss_pred cccccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEe-cC
Q 009960 300 TFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVT-GN 378 (521)
Q Consensus 300 ~~~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~ 378 (521)
....++++.|... ...|+|||++|... .|+ +. ++
T Consensus 310 -----~~~~~~~~~l~~~------~~~~~iNg~~~~~~-~p~---------------------------------~~~~~ 344 (448)
T 3aw5_A 310 -----KPTRTRRFALSLS------GMQWTINGMFWNAS-NPL---------------------------------FEHVS 344 (448)
T ss_dssp -----CCSEEEEEEEEEE------TTEEEETTBCCCTT-CTT---------------------------------CCCEE
T ss_pred -----CCCceEEEEEeCC------CceeeECCCcCCCC-CCc---------------------------------eeccC
Confidence 1124577777542 13699999998632 120 23 57
Q ss_pred CCcEEEEEEEcCC-CCccceeecCcceEEEeeccccCC-CCCCCCCC----CCCCCcceEEEeCCCCEEEEE--EE---e
Q 009960 379 HKGWIELVFNNNL-DVIDSWHLDGFGFHVVGFGIGEWA-PESRSTYN----LFDPVVRSTVQVYPGGWTAVY--AF---L 447 (521)
Q Consensus 379 ~g~~v~~vi~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~-~~~~~~~n----~~~p~~rDTv~vp~~g~v~ir--f~---a 447 (521)
.|++|+|+|+|.+ .+.||||||||+||||++++ .+. ......+| ..++.|||||.|+|+++++|+ |+ +
T Consensus 345 ~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G-~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~a 423 (448)
T 3aw5_A 345 VEGVELWEIVNDKASMPHPMHLHGFPMWIIERKD-SPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKR 423 (448)
T ss_dssp ECEEEEEEEEECSSSCCEEEEESSSCBEEEEEES-CCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGT
T ss_pred CCCeEEEEEEcCCCCCCcCEEECCceEEEEEecC-CCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCC
Confidence 8999999999998 89999999999999999964 232 11112222 334579999999999999766 88 8
Q ss_pred cCCeeeEEeecchhhhhccceEEEEEe
Q 009960 448 DNPGMWNLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 448 dnpG~w~~HCHil~H~d~GMm~~~~V~ 474 (521)
||| |+|||||++|++.|||+.|+|.
T Consensus 424 dnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 424 GQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp TCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred CCc--EEEEcCChHHHhCCCceEEEeC
Confidence 999 9999999999999999999883
No 12
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=7.2e-80 Score=657.89 Aligned_cols=394 Identities=15% Similarity=0.150 Sum_probs=302.0
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCch--
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSIN-- 78 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~-- 78 (521)
++|||+|||++||+|+|+|+|+|+++++|||||+++. ..+||++ ||+|+||++|+|+|++.+++||||||||.+
T Consensus 65 ~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~~--~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~ 140 (534)
T 3abg_A 65 MSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSR--AAFDGWA--EDITEPGSFKDYYYPNRQSARTLWYHDHAMHI 140 (534)
T ss_dssp CSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCC--TTTTTCS--SSCBSSCSCCCEEECCCSSSCEEEEEECCTTC
T ss_pred cCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCC--CCCCCCC--CCCCCCCCeEEEEEecCCcceeEEEecCcccc
Confidence 6899999999999999999999999999999999875 4699987 899999999999999766689999999975
Q ss_pred --hhhcCCceecEEEeCCCCCCCCCCC--CCcceeEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEEEcCcCCCCCCCC
Q 009960 79 --FQKAGGGFGPIRVNNRIVISVPFPK--PEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMT 154 (521)
Q Consensus 79 --~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~ 154 (521)
.|+++||+|+|||+++.+...+++. .++|++|+|+||+++..+++.. ..+. .....+|.++|||+.+
T Consensus 141 t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~--~~~~-~~~~~gd~~lvNG~~~------ 211 (534)
T 3abg_A 141 TAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT--TNGE-LNSFWGDVIHVNGQPW------ 211 (534)
T ss_dssp HHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC--CTTC-SSCCCCSEEEETTEES------
T ss_pred chhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceec--cCCC-CccccCceeccCCccC------
Confidence 5889999999999997665444433 3678999999999876543211 1111 1223679999999998
Q ss_pred CCCceEEEecCcEEEEEEEecCccceeeEEEcC-------ceeEEEEecCCc-ccceeeeeEEecCCcEEEEEEEeCCCC
Q 009960 155 REPESFTVTKGMTYRFRISNVGSVFSFNFRIQN-------HKMVLVETEGSY-TNQITLRSLDVHVGQSYSVLVTADQNE 226 (521)
Q Consensus 155 ~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~g-------h~~~via~DG~~-~~p~~~d~v~l~pGeR~dv~v~~~~~~ 226 (521)
|.++|++ ++|||||||+|+.+.+.|+|++ |+|+||++||++ .+|..+++|.|+|||||||+|++++.+
T Consensus 212 ---p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~ 287 (534)
T 3abg_A 212 ---PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYA 287 (534)
T ss_dssp ---CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCT
T ss_pred ---ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCC
Confidence 7899998 5999999999999999999987 999999999985 589999999999999999999999767
Q ss_pred c-ceEEEecccc-ccCC-CCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCccccc
Q 009960 227 A-DYYIVASPKL-ISTN-DSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNV 303 (521)
Q Consensus 227 g-~~~i~~~~~~-~~~~-~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~ 303 (521)
| +|+|++.... .+.. ........++++|.....+........| ..+.+. +.|.+
T Consensus 288 g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P----------------~~L~~~-~~p~~------ 344 (534)
T 3abg_A 288 GKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP----------------ANLRDV-PFPSP------ 344 (534)
T ss_dssp TSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC----------------CCCCCC-SCCCC------
T ss_pred CceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc----------------cccccC-CCCCC------
Confidence 7 6999985421 1111 1112234588998754321000000001 011110 01111
Q ss_pred cccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcEE
Q 009960 304 SNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWI 383 (521)
Q Consensus 304 ~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 383 (521)
....++++.|... + ..|+|||++|..+..|++ ..++.|+++
T Consensus 345 -~~~~~~~~~~~~~-----~-~~w~iNG~~f~~~~~p~l--------------------------------~~v~~G~~~ 385 (534)
T 3abg_A 345 -TTNTPRQFRFGRT-----G-PTWTINGVAFADVQNRLL--------------------------------ANVPVGTVE 385 (534)
T ss_dssp -CCCCCEEEECSCC-----C-STTCCCCBTTBCTTSCCC--------------------------------CEECTTCEE
T ss_pred -ccccceEEEEecc-----C-ceeEECCcccCCCCCcce--------------------------------eeccCCCEE
Confidence 1124567766532 1 259999999975544421 246789999
Q ss_pred EEEEEcCC-CCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEE-ecCCeeeEEeecchh
Q 009960 384 ELVFNNNL-DVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAF-LDNPGMWNLRSQLLQ 461 (521)
Q Consensus 384 ~~vi~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~-adnpG~w~~HCHil~ 461 (521)
+|+|+|.+ .+.||||||||+||||+++.|.+.. ..+++.+ .|||||.|+|+++++|||+ +||||.|+|||||++
T Consensus 386 ~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~ 461 (534)
T 3abg_A 386 RWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLI 461 (534)
T ss_dssp EEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHH
T ss_pred EEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHH
Confidence 99999987 4699999999999999996553321 1244455 7999999999999999998 899999999999999
Q ss_pred hhhccceEEEEEeCCC
Q 009960 462 NWFLGQELYIRVHNSD 477 (521)
Q Consensus 462 H~d~GMm~~~~V~~~~ 477 (521)
|++.|||+.|.|...+
T Consensus 462 H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 462 HEDHDMMAAFNATVLP 477 (534)
T ss_dssp HHHTTCEEEEEECSSC
T ss_pred HHhcCCceEEEEEecc
Confidence 9999999999998665
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.4e-79 Score=655.40 Aligned_cols=401 Identities=16% Similarity=0.197 Sum_probs=299.6
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCC----------------------CeeEEecCcCCCCCCCCCCCcc--c-CcccCCC
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDE----------------------PLLFTWNGIQQRLNSWQDGVSG--T-NCPILPR 55 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~----------------------~~~iH~HG~~~~~~~~~DG~~~--~-q~~i~pG 55 (521)
++|||+|||++||+|+|+|+|+|++ +|+|||||+++. +++||+|+ + ||+|+||
T Consensus 54 ~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~--~~~DG~p~~~i~~g~i~pG 131 (513)
T 2wsd_A 54 LFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGYPEAWFSKDFEQTG 131 (513)
T ss_dssp BSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC--GGGSCCTTSCBCGGGSSBC
T ss_pred CccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC--CccCCCCcccccCCcccCC
Confidence 5899999999999999999999975 899999999874 67999996 4 9999999
Q ss_pred Cce---EEEEEEcceeeeEEEecCch----hhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHHHHhc
Q 009960 56 KNW---TYVFQVKDQIGSFFYFPSIN----FQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTRSMAN 128 (521)
Q Consensus 56 ~~~---~y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~ 128 (521)
++| +|+|++.+++||||||||.. .|+++||+|+|||+++.+.+.+++.+++|++|+|+||+++.++++.....
T Consensus 132 ~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~ 211 (513)
T 2wsd_A 132 PYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSA 211 (513)
T ss_dssp TTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGGCCCCGGGEEEEEEEEEEECTTSCEECCSS
T ss_pred CccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccccCCCCCCcEEEEEEeeecCCCCceecccc
Confidence 555 99999766899999999985 58999999999999976555455567899999999999876543311100
Q ss_pred c----C----C-CCCCCCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCc-eeEEEEecCC
Q 009960 129 T----S----L-TAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNH-KMVLVETEGS 198 (521)
Q Consensus 129 ~----~----~-~~~~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh-~~~via~DG~ 198 (521)
. + . ......++.+||||+.+ |.++|++| +|||||||+|+.+.+.|+|+|| +|+||++||+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~d~~liNG~~~---------p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~ 281 (513)
T 2wsd_A 212 PENPSPSLPNPSIVPAFCGETILVNGKVW---------PYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGG 281 (513)
T ss_dssp CSSCCTTSCSSCCCSCCCCSEEEETTEES---------CEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTE
T ss_pred cccccccccccccccccccceEEECCccc---------ceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEccCCC
Confidence 0 0 0 01234679999999999 78999985 8999999999999999999999 9999999999
Q ss_pred cc-cceeeeeEEecCCcEEEEEEEeCCCCcceE-EEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCccc
Q 009960 199 YT-NQITLRSLDVHVGQSYSVLVTADQNEADYY-IVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDF 276 (521)
Q Consensus 199 ~~-~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~-i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~ 276 (521)
++ +|..++++.|+|||||||+|++++.+|++. ++... .+..........++++|..............|.
T Consensus 282 ~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~--~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~------ 353 (513)
T 2wsd_A 282 LLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSA--GCGGDVNPETDANIMQFRVTKPLAQKDESRKPK------ 353 (513)
T ss_dssp EEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECC--CSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCS------
T ss_pred cccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecc--cccccCCCCCCcceEEEEeccCcccCccCCCCc------
Confidence 98 899999999999999999999997678743 33322 111111112345788887653211000001110
Q ss_pred ccccccccccccccCCCCCCCCccccccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccC
Q 009960 277 SMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQL 356 (521)
Q Consensus 277 ~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~ 356 (521)
.+......+. .....++++.|...+. ..+...|+|||++|..+ .
T Consensus 354 ----------~l~~~~~~~~-------~~~~~~~~~~l~~~~~-~~g~~~~~iNg~~~~~~-~----------------- 397 (513)
T 2wsd_A 354 ----------YLASYPSVQH-------ERIQNIRTLKLAGTQD-EYGRPVLLLNNKRWHDP-V----------------- 397 (513)
T ss_dssp ----------BCSCCGGGCC-------CCEEEEEEEEEEEEEC-TTSCEEEEETTBCTTSC-C-----------------
T ss_pred ----------cccCCCCccc-------CCCcceEEEEEEeecC-CCCCceEeECCccCCCc-c-----------------
Confidence 0000000010 0112456666654322 13445799999988532 0
Q ss_pred CCCCCCCCCCCcccceeEEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccc---cCCCCCCCCCCC---------
Q 009960 357 DWFPTNSVNDEATRGVSVVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIG---EWAPESRSTYNL--------- 424 (521)
Q Consensus 357 ~~~~~~p~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~~~~~~n~--------- 424 (521)
.+.++.|++++|+|+|.+.+.||||||||+||||++++. .|++.. .+|+
T Consensus 398 -----------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 458 (513)
T 2wsd_A 398 -----------------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESG--ELSYTGPAVPPPP 458 (513)
T ss_dssp -----------------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHC--CCCBSSCCBCCCG
T ss_pred -----------------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccccccccc--cccccCCCCCCCc
Confidence 124678999999999999999999999999999999762 222111 1222
Q ss_pred CCCCcceEEEeCCCCEEEEEEEe-cCCeeeEEeecchhhhhccceEEEEEeCC
Q 009960 425 FDPVVRSTVQVYPGGWTAVYAFL-DNPGMWNLRSQLLQNWFLGQELYIRVHNS 476 (521)
Q Consensus 425 ~~p~~rDTv~vp~~g~v~irf~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~ 476 (521)
.++.|||||.|+|+++++|+|+| ||||.|+|||||++|++.|||+.|+|.++
T Consensus 459 ~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 459 SEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp GGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred cccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 23469999999999999999999 89999999999999999999999999754
No 14
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.4e-78 Score=635.72 Aligned_cols=377 Identities=20% Similarity=0.234 Sum_probs=289.5
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcce-eeeEEEecCc--
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQ-IGSFFYFPSI-- 77 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~-~Gt~wYH~H~-- 77 (521)
++|||+|||++||+|+|+|+|+|+++|||||||+++ ++++||+| ||+|+||++|+|+|+++++ +||||||||.
T Consensus 78 ~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DG~p--q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~ 153 (481)
T 3zx1_A 78 LVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDGSP--HDPILAGEERIYRFEIPQDSAGTYWYHPHPHY 153 (481)
T ss_dssp BSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCCT--TSCBCTTCEEEEEEECCTTCCEEEEEECCCTT
T ss_pred CCCCceEEEECCcEEEEEEEeCCCCCeeEEecCccc--CCccCCCc--cCcCCCCCeEEEEEeCCCCCCceEEEeecCCC
Confidence 589999999999999999999999999999999987 57899998 9999999999999998543 8999999996
Q ss_pred --hhhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHH----HHhccCCCCCCCCCCeEEEcCcCCCCC
Q 009960 78 --NFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTR----SMANTSLTAYNAIPDVILMNGKGPFGY 151 (521)
Q Consensus 78 --~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~----~~~~~~~~~~~~~~~~~liNG~~~~~~ 151 (521)
+.|+++||+|+|||+++.+...++ ++++ |+++||+++..+.+. .....| ..++.++|||+..
T Consensus 154 ~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~~~~~~~~~~~~g-----~~gd~~lvNG~~~--- 221 (481)
T 3zx1_A 154 TASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQIPNNNLNDWLNG-----REGEFVLINGQFK--- 221 (481)
T ss_dssp THHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSCCCCCCHHHHHHC-----CCCSEEEETTEES---
T ss_pred cchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCccccccchhhccC-----CcCCEEEECCccC---
Confidence 589999999999999976543333 4565 999999987654321 000111 2578999999998
Q ss_pred CCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcc-cceeeeeEEecCCcEEEEEEEeCCCCcceE
Q 009960 152 QMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYT-NQITLRSLDVHVGQSYSVLVTADQNEADYY 230 (521)
Q Consensus 152 ~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~ 230 (521)
|.++|++|+ ||||||+|+.+.+.|+|+||+|+||++||+++ +|..++++.|+|||||||+|+++ .++.|.
T Consensus 222 ------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~ 292 (481)
T 3zx1_A 222 ------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFK 292 (481)
T ss_dssp ------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEE
T ss_pred ------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEE
Confidence 899999998 99999999999999999999999999998775 89999999999999999999998 477899
Q ss_pred EEeccccccCC-CCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCccccccccCcc
Q 009960 231 IVASPKLISTN-DSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLS 309 (521)
Q Consensus 231 i~~~~~~~~~~-~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~ 309 (521)
|++........ .........++++..... ..++|.. +.+..+.+.+ ..+
T Consensus 293 l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~lP~~-------------------l~~~~~~~~~---------~~~ 342 (481)
T 3zx1_A 293 LESAYYDRDKMMVKEEPNTLFLANINLKKE--NVELPKN-------------------LKIFKPSEEP---------KEF 342 (481)
T ss_dssp EEECCCCCCCSSCCCCCCCEEEEEEEEECC--CCCCCSC-------------------SCCCCCCCCC---------CEE
T ss_pred EEEecccccCccccCCCCceeEEEEecCCC--CccCCcc-------------------ccCCCCCCCC---------CcE
Confidence 98754322111 011122333444432211 0122210 1110001111 145
Q ss_pred eEEEEeccccccC-----Cc--------eEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEe
Q 009960 310 QTFILQGSKAEIS-----GW--------PRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVT 376 (521)
Q Consensus 310 ~~~~l~~~~~~~~-----g~--------~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 376 (521)
+++.|........ +. ..|+|||+.|... .| .+.
T Consensus 343 r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~-~~---------------------------------~~~ 388 (481)
T 3zx1_A 343 KEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLK-RI---------------------------------DLS 388 (481)
T ss_dssp EEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTT-CC---------------------------------CEE
T ss_pred EEEEEeccchhcccccccccccccccccceeEECCEeCCCC-Cc---------------------------------eEE
Confidence 6666654221000 11 2499999988521 11 146
Q ss_pred cCCCcEEEEEEEcCCCCccceeecCcceEEEee--ccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeE
Q 009960 377 GNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGF--GIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWN 454 (521)
Q Consensus 377 ~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~--g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~ 454 (521)
++.|++|+|+|.|.+.+.|||||||+.|+|+++ ++.+.. ..++.|||||.|+|+++++|+|+|||||.|+
T Consensus 389 ~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~~--------~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~ 460 (481)
T 3zx1_A 389 SKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQK--------AEFRALRDTINVRPNEELRLRMKQDFKGLRM 460 (481)
T ss_dssp EETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEEE--------CSSCCEESEEEECTTCEEEEEECCCSCEEEE
T ss_pred eCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCCC--------cccCcccceEEECCCCEEEEEEEcCCCeeEE
Confidence 788999999999999999999999999999999 443221 1246899999999999999999999999999
Q ss_pred EeecchhhhhccceEEEEEe
Q 009960 455 LRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 455 ~HCHil~H~d~GMm~~~~V~ 474 (521)
|||||++|++.|||..|+|.
T Consensus 461 ~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 461 YHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EEESSHHHHHTTCEEEEEEE
T ss_pred EEcCChHHHhcCCceEEEEe
Confidence 99999999999999999996
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=3.7e-77 Score=653.91 Aligned_cols=419 Identities=14% Similarity=0.106 Sum_probs=288.7
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCC-----------------------------------------eeEEecCcCCCCC
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEP-----------------------------------------LLFTWNGIQQRLN 39 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~-----------------------------------------~~iH~HG~~~~~~ 39 (521)
++|||||||++||+|+|+|+|+|+++ |+|||||+++ .
T Consensus 61 ~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~--~ 138 (612)
T 3gyr_A 61 QVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQT--G 138 (612)
T ss_dssp BSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCC--C
T ss_pred cccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccCCCCceEEcCCCcc--C
Confidence 68999999999999999999999654 6889999987 4
Q ss_pred CCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCc----hhhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeee
Q 009960 40 SWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSI----NFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDW 115 (521)
Q Consensus 40 ~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~ 115 (521)
+.+||++ ||+|+||++|+|+|++.+++||||||||. +.|+++||+|+|||+++.+...+.+.+++|++|+|+||
T Consensus 139 ~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw 216 (612)
T 3gyr_A 139 GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDREIPLLIADR 216 (612)
T ss_dssp TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEE
T ss_pred CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccccccCCCCCCccEEEEEEEE
Confidence 6799988 99999999999999986678999999996 58999999999999997766666667899999999999
Q ss_pred ccCCHHHHHHH--h-------c-----cCC-CCCCCCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccce
Q 009960 116 FYDDYKKTRSM--A-------N-----TSL-TAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFS 180 (521)
Q Consensus 116 ~~~~~~~~~~~--~-------~-----~~~-~~~~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~ 180 (521)
+++.+.+.... + . .+. ......++.++|||+.+ |.+.++. ++|||||||+|+.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~---------p~~~v~~-~~yRlRliNas~~~~ 286 (612)
T 3gyr_A 217 NLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW---------PYADVDD-GWYRLRLVNASNARI 286 (612)
T ss_dssp CEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES---------CEEEEES-SEEEEEEEECCSSCC
T ss_pred ecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc---------ceEeccC-cEEEEEEEeccCCcc
Confidence 98654322100 0 0 000 01123578999999998 7888876 589999999999999
Q ss_pred eeEEEcCc-------eeEEEEecCCcc-cceee------eeEEecCCcEEEEEEEeCCCCcceEEEeccccccC-C---C
Q 009960 181 FNFRIQNH-------KMVLVETEGSYT-NQITL------RSLDVHVGQSYSVLVTADQNEADYYIVASPKLIST-N---D 242 (521)
Q Consensus 181 ~~~~i~gh-------~~~via~DG~~~-~p~~~------d~v~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~-~---~ 242 (521)
+.|+|++| +|+|||+||+++ +|+.+ ++|.|+|||||||+|++++.+|.++.......... . .
T Consensus 287 ~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (612)
T 3gyr_A 287 YNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDP 366 (612)
T ss_dssp EEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBG
T ss_pred eeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCc
Confidence 99999998 599999999998 46554 48999999999999999987776554443221111 0 0
Q ss_pred CCCceeEEEEEeCCCCCC--CCCCCCCCCCCCCcc--cccccccccccccccCCCCCCCCccccccccCcceEEEEeccc
Q 009960 243 SSNLVGLGVLHYSNSKSQ--VTGPLPIGPDPFDLD--FSMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLSQTFILQGSK 318 (521)
Q Consensus 243 ~~~~~~~ail~y~~~~~~--~~~~~p~~p~~~~~~--~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~ 318 (521)
........+++|...... ....+|......... .......... .+.. +.... .......+.+....
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~-----~~~~~~~~~~~~~~ 436 (612)
T 3gyr_A 367 LGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLI-VLTP----PGTKG-----SGGHPEIWEMAEVE 436 (612)
T ss_dssp GGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEE-EEEC----TTCTT-----TTTCCEEEEEEECC
T ss_pred cccccccceeeecccCCCCCCcccccccccccccccccccccccccc-cccc----ccccc-----cccccccccccccc
Confidence 112233456666433221 111111110000000 0000000000 0000 00000 00000000000000
Q ss_pred ----------------cccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcE
Q 009960 319 ----------------AEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGW 382 (521)
Q Consensus 319 ----------------~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 382 (521)
........|.+|++.|. +...+.++.|++
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-----------------------------------~~~~~~~~~g~~ 481 (612)
T 3gyr_A 437 DPADVQVPAEGVIQVTGADGRTKTYRRTARTFN-----------------------------------DGLGFTIGEGTH 481 (612)
T ss_dssp -----CCSCTTEEEEECTTSCEEEEEEEECSTT-----------------------------------SCCCEEEETTCE
T ss_pred ccccccccccceeeeccCCCccccccccCccCC-----------------------------------CCcceEeCCCCE
Confidence 00011123444443321 122356789999
Q ss_pred EEEEEEcCCCCccceeecCcceEEEeeccccCCCCC----------------CCCCCCCCCCcceEEEeCCCCEEEEEEE
Q 009960 383 IELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPES----------------RSTYNLFDPVVRSTVQVYPGGWTAVYAF 446 (521)
Q Consensus 383 v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~----------------~~~~n~~~p~~rDTv~vp~~g~v~irf~ 446 (521)
++|+|+|.+.+.||||||||+||||+++++.+.... ....+..++.|||||.|+++++++|||+
T Consensus 482 ~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~r 561 (612)
T 3gyr_A 482 EQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGK 561 (612)
T ss_dssp EEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEE
T ss_pred EEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEE
Confidence 999999999999999999999999999765433210 1234567789999999999999999998
Q ss_pred -ecCCeeeEEeecchhhhhccceEEEEEeCCCC
Q 009960 447 -LDNPGMWNLRSQLLQNWFLGQELYIRVHNSDP 478 (521)
Q Consensus 447 -adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 478 (521)
+||||.||||||||+|||.|||+.|+|.+++.
T Consensus 562 fadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 562 FDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred eCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 69999999999999999999999999988763
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.5e-76 Score=619.98 Aligned_cols=387 Identities=18% Similarity=0.230 Sum_probs=283.7
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCc---
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSI--- 77 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~--- 77 (521)
++|||+||+++||+|+|+|+|+|+++++|||||+++. +.+||+| ||+|.||++|+|+|++.+++||||||||.
T Consensus 44 ~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~ 119 (488)
T 3od3_A 44 NLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGK 119 (488)
T ss_dssp SSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TCCBCTTCEEEEEEECCSCSEEEEEECCCTTT
T ss_pred cCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cCcCcCCCeEEEEEecCCCceeEEEEecCCCc
Confidence 5899999999999999999999999999999999875 5699988 89999999999999986668999999996
Q ss_pred -hhhhcCCceecEEEeCCCCCCCCCC--CCCcceeEEeeeeccCCHHHHHHHhc--cCCCCCCCCCCeEEEcCcCCCCCC
Q 009960 78 -NFQKAGGGFGPIRVNNRIVISVPFP--KPEAEFDLLIGDWFYDDYKKTRSMAN--TSLTAYNAIPDVILMNGKGPFGYQ 152 (521)
Q Consensus 78 -~~q~~~Gl~G~liV~~~~~~~~~~~--~~~~e~~l~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~liNG~~~~~~~ 152 (521)
+.|+++||+|+|||+++.....+++ ...+|++|+|+||+++.++++..... ... ....++.++|||+.+
T Consensus 120 t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~~~~~~--~g~~gd~~lvNG~~~---- 193 (488)
T 3od3_A 120 TGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAA--VGWFGDTLLTNGAIY---- 193 (488)
T ss_dssp HHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCSHHHHH--HCCCCSEEEETTBSS----
T ss_pred chhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceeccccccccc--cCCCCCEEEEcCCcC----
Confidence 5899999999999998765443332 23569999999999976543211000 000 112578999999988
Q ss_pred CCCCCceEEEecCcEEEEEEEecCccceeeEEE-cCceeEEEEecCCcc-cceeeeeEEecCCcEEEEEEEeCCCCcceE
Q 009960 153 MTREPESFTVTKGMTYRFRISNVGSVFSFNFRI-QNHKMVLVETEGSYT-NQITLRSLDVHVGQSYSVLVTADQNEADYY 230 (521)
Q Consensus 153 ~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~ 230 (521)
|.+.+ +|++|||||||+|+.+.+.|+| +||+|+||++||+++ +|+.+++|.|+|||||||+|+++ ..+.|.
T Consensus 194 -----p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~ 266 (488)
T 3od3_A 194 -----PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFD 266 (488)
T ss_dssp -----CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEE
T ss_pred -----ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEE
Confidence 67766 5689999999999999999999 699999999999987 89999999999999999999999 467899
Q ss_pred EEeccccccCCC-CCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCccccccccCcc
Q 009960 231 IVASPKLISTND-SSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLS 309 (521)
Q Consensus 231 i~~~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~ 309 (521)
|++......... ........+++......+....+|.. |.+....| . .....+
T Consensus 267 l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~-------------------L~~~~~~~--~-----~~~~~~ 320 (488)
T 3od3_A 267 LVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDT-------------------LSSLPALP--S-----LEGLTV 320 (488)
T ss_dssp EEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSC-------------------CCCCCCCC--C-----CTTCCE
T ss_pred EEEeccCCCCcccccccCccceeEecccccCCCCCCCcc-------------------cccCCCCc--c-----cccccc
Confidence 987653221110 00111222333322111001111110 00000000 0 001123
Q ss_pred eEEEEeccc-------------------cc----------cCC-------------ceEEEEccEEeecCCCchhhhhhh
Q 009960 310 QTFILQGSK-------------------AE----------ISG-------------WPRYVINNVSYLTLETPLKLADYF 347 (521)
Q Consensus 310 ~~~~l~~~~-------------------~~----------~~g-------------~~~~~iNg~~f~~~~~P~l~~~~~ 347 (521)
|++.|.... .. ..| ...|+|||+.|... .|
T Consensus 321 r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~~-~~------- 392 (488)
T 3od3_A 321 RKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMN-KP------- 392 (488)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCTT-CC-------
T ss_pred eEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCeeCCCC-CC-------
Confidence 455442100 00 001 01389999998522 11
Q ss_pred ccCCccccCCCCCCCCCCCCcccceeEEecCCCcEEEEEEEcCC-CCccceeecCcceEEEeeccccCCCCCCCCCCCCC
Q 009960 348 VNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFNNNL-DVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFD 426 (521)
Q Consensus 348 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~vi~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~ 426 (521)
.+.++.|++++|.|.|.+ .+.|||||||++|+|+++++.+..+ .+
T Consensus 393 --------------------------~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~--------~~ 438 (488)
T 3od3_A 393 --------------------------MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAA--------HR 438 (488)
T ss_dssp --------------------------SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCG--------GG
T ss_pred --------------------------ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCcccc--------cc
Confidence 146789999999999988 7899999999999999997643321 23
Q ss_pred CCcceEEEeCCCCEEEEEEEec----CCeeeEEeecchhhhhccceEEEEE
Q 009960 427 PVVRSTVQVYPGGWTAVYAFLD----NPGMWNLRSQLLQNWFLGQELYIRV 473 (521)
Q Consensus 427 p~~rDTv~vp~~g~v~irf~ad----npG~w~~HCHil~H~d~GMm~~~~V 473 (521)
+.|||||.|+ |++++|+|+|+ |||.||||||||+|+|.|||..|+|
T Consensus 439 ~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 439 AGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp SSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred CCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 5799999999 99999999985 4689999999999999999999976
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=1.9e-74 Score=620.46 Aligned_cols=418 Identities=15% Similarity=0.139 Sum_probs=294.8
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCC-----------------------------------------eeEEecCcCCCCC
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEP-----------------------------------------LLFTWNGIQQRLN 39 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~-----------------------------------------~~iH~HG~~~~~~ 39 (521)
++|||||+|++||+|+|+++|+|++. +++||||+++.
T Consensus 61 ~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~-- 138 (612)
T 2g23_A 61 QVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTG-- 138 (612)
T ss_dssp BSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCC--
T ss_pred ccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccccccccccccccccccCCceEEEcCCCCCC--
Confidence 58999999999999999999999753 89999999875
Q ss_pred CCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCch----hhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeee
Q 009960 40 SWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSIN----FQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDW 115 (521)
Q Consensus 40 ~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~ 115 (521)
+.+||++ ||+|.||++|+|+|++.+++||||||||.. .|+++||+|+|||+++.+...+++.+++|++|+|+||
T Consensus 139 ~~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw 216 (612)
T 2g23_A 139 GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDREIPLLIADR 216 (612)
T ss_dssp TTTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEE
T ss_pred CccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcccccccCCCCcceEEEEEEEE
Confidence 4599987 899999999999999766799999999986 4999999999999997655555556799999999999
Q ss_pred ccCCHHH--HHHHh-------ccC-CC-C----CCCCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccce
Q 009960 116 FYDDYKK--TRSMA-------NTS-LT-A----YNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFS 180 (521)
Q Consensus 116 ~~~~~~~--~~~~~-------~~~-~~-~----~~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~ 180 (521)
+++.+.. +...+ ... .. + ....+|.+||||+.+ |.++|++| +|||||||+|+.+.
T Consensus 217 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~---------p~~~V~~g-~yRlRliNas~~r~ 286 (612)
T 2g23_A 217 NLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW---------PYADVDDG-WYRLRLVNASNARI 286 (612)
T ss_dssp CEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES---------CEEEEESS-EEEEEEEECCSSCC
T ss_pred eccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC---------CeEEecCC-eEEEEEEecCCCeE
Confidence 9975421 10000 000 00 0 113679999999998 89999999 99999999999999
Q ss_pred eeEEEcCc-------eeEEEEecCCcc-cceeee------eEEecCCcEEEEEEEeCCCCc-ceEEEeccccccCCCCC-
Q 009960 181 FNFRIQNH-------KMVLVETEGSYT-NQITLR------SLDVHVGQSYSVLVTADQNEA-DYYIVASPKLISTNDSS- 244 (521)
Q Consensus 181 ~~~~i~gh-------~~~via~DG~~~-~p~~~d------~v~l~pGeR~dv~v~~~~~~g-~~~i~~~~~~~~~~~~~- 244 (521)
+.|+|++| +|+|||+||+++ +|+.++ +|.|+|||||||+|++++.+| +|+|+........+...
T Consensus 287 ~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~ 366 (612)
T 2g23_A 287 YNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDP 366 (612)
T ss_dssp EEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBG
T ss_pred EEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCcccc
Confidence 99999999 899999999999 599999 999999999999999998777 58888764211111000
Q ss_pred --CceeEEEEEeCCCCCC--CCCCCCCCC-C-CCCcccccccccccccccccCCCCCCCCccccccccCcceEEEEeccc
Q 009960 245 --NLVGLGVLHYSNSKSQ--VTGPLPIGP-D-PFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLSQTFILQGSK 318 (521)
Q Consensus 245 --~~~~~ail~y~~~~~~--~~~~~p~~p-~-~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~ 318 (521)
......+++++..... .+..+|..- . ...+........++. .+. | |.. .+.....+.+.+....
T Consensus 367 ~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r~~-~~~-----~-~~~---~~~~~~~~~~~~~~~~ 436 (612)
T 2g23_A 367 LGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLI-VLT-----P-PGT---KGSGGHPEIWEMAEVE 436 (612)
T ss_dssp GGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEE-EEC-----C-TTC---TTSTTCCCEEEEEEEC
T ss_pred ccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccceeEE-eec-----c-ccc---cccccccceeeccccc
Confidence 0111235555432211 111222110 0 000000000000000 000 0 000 0000000111111100
Q ss_pred ---------------cccCC-ceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcE
Q 009960 319 ---------------AEISG-WPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGW 382 (521)
Q Consensus 319 ---------------~~~~g-~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 382 (521)
...+| ...|+|||+.|... ..+.++.|++
T Consensus 437 ~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~-----------------------------------~~~~v~~G~~ 481 (612)
T 2g23_A 437 DPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDG-----------------------------------LGFTIGEGTH 481 (612)
T ss_dssp -----CCSCTTEEEEECTTSCEEEEEEEECSTTSC-----------------------------------CCEEEETTCE
T ss_pred cccccccccccceeeeccCCceeEEEECCccCCCC-----------------------------------CceEecCCCE
Confidence 00122 24578888876421 1246788999
Q ss_pred EEEEEEcCCCCccceeecCcceEEEeeccccCC---CC-------------CCCCCCCCCCCcceEEEeCCCCEEEEEEE
Q 009960 383 IELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWA---PE-------------SRSTYNLFDPVVRSTVQVYPGGWTAVYAF 446 (521)
Q Consensus 383 v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~---~~-------------~~~~~n~~~p~~rDTv~vp~~g~v~irf~ 446 (521)
|+|+|.|.+.+.|||||||+.|+|++++...++ .. .....+..++.|||||.|+|+++++|+|+
T Consensus 482 v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~ 561 (612)
T 2g23_A 482 EQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGK 561 (612)
T ss_dssp EEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEE
T ss_pred EEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEE
Confidence 999999999999999999999999998653221 10 00234556678999999999999999999
Q ss_pred ec-CCeeeEEeecchhhhhccceEEEEEeCCC
Q 009960 447 LD-NPGMWNLRSQLLQNWFLGQELYIRVHNSD 477 (521)
Q Consensus 447 ad-npG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (521)
|+ |||.|||||||++|+|.|||..|.|...+
T Consensus 562 ~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 562 FDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp CCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred eCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 99 99999999999999999999999997543
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.1e-52 Score=478.73 Aligned_cols=360 Identities=14% Similarity=0.192 Sum_probs=247.3
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCC----CCCCCCCCcc--c-CcccCCCCceEEEEEEcce------
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQR----LNSWQDGVSG--T-NCPILPRKNWTYVFQVKDQ------ 67 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~----~~~~~DG~~~--~-q~~i~pG~~~~y~f~~~~~------ 67 (521)
++|||+|||++||+|+|+|+|+|+++++|||||+++. +.+++||+++ + ||+|+||++|+|+|+++++
T Consensus 91 ~~PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~ 170 (1065)
T 2j5w_A 91 GFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEG 170 (1065)
T ss_dssp TTSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTT
T ss_pred CCcCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccC
Confidence 5899999999999999999999999999999999886 4577888887 5 9999999999999998654
Q ss_pred ---eeeEEEecCchh--hhcCCceecEEEeCCCCCCCCCC-CCCcceeEEeee------eccCCHHHHHHHh-ccCCC-C
Q 009960 68 ---IGSFFYFPSINF--QKAGGGFGPIRVNNRIVISVPFP-KPEAEFDLLIGD------WFYDDYKKTRSMA-NTSLT-A 133 (521)
Q Consensus 68 ---~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~l~d------~~~~~~~~~~~~~-~~~~~-~ 133 (521)
+||||||||.+. |+++||+|+|||+++.....+.+ ..|+|++|+++| |++... +..+. +.+.. .
T Consensus 171 d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~ 248 (1065)
T 2j5w_A 171 DGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDK 248 (1065)
T ss_dssp SCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCT
T ss_pred CCCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccc
Confidence 599999999874 56899999999999765433322 458899999995 544321 11111 11100 0
Q ss_pred -CC---CCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCcc-ceeeEEEcCceeEEEEecCCcccceeeeeE
Q 009960 134 -YN---AIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSV-FSFNFRIQNHKMVLVETEGSYTNQITLRSL 208 (521)
Q Consensus 134 -~~---~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v 208 (521)
.. ..++.++|||+.+. ..+.++|++|++|||||+|+|.. ..+.|||+||+|+ ++|..+|++
T Consensus 249 ~~~~~~~~~~~~~iNG~~~~------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv 314 (1065)
T 2j5w_A 249 DNEDFQQSNRMYSVNGYTFG------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTI 314 (1065)
T ss_dssp TCHHHHHHTEEEEETTEETT------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEE
T ss_pred ccccccccCcEEEECCccCC------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEE
Confidence 00 02357999999862 23789999999999999999986 5889999999999 357899999
Q ss_pred EecCCcEEEEEEEeCCCCcceEEEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCccccccccccccccc
Q 009960 209 DVHVGQSYSVLVTADQNEADYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNL 288 (521)
Q Consensus 209 ~l~pGeR~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l 288 (521)
.|+|||||||+|++++ +|+|+|+++...... ....+.++|.+.....+.+.|..+ ....+ +..++++.|++
T Consensus 315 ~I~pGer~dVlv~~~~-pG~y~i~~h~~~h~~-----~Gm~~~~~V~~~~~~~~~~~~~g~--~~~~~-~i~A~e~~wdy 385 (1065)
T 2j5w_A 315 NLFPATLFDAYMVAQN-PGEWMLSCQNLNHLK-----AGLQAFFQVQECNKSSSKDNIRGK--HVRHY-YIAAEEIIWNY 385 (1065)
T ss_dssp EECBTCEEEEEEECCS-CEEEEEEECSHHHHH-----TTCEEEEEEECSCCCCCCCCCTTS--EEEEE-EEEEEEEEEES
T ss_pred EECCCcEEEEEEEeCC-CeeEEEEecCcchhh-----CCCEEEEEEecCCCcccccccccc--ceeEE-EEeceeccccc
Confidence 9999999999999995 899999998653211 234677888765432222222211 01112 34567778888
Q ss_pred ccCCC------CCCCCccccccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCC
Q 009960 289 TAGAA------RPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTN 362 (521)
Q Consensus 289 ~~~~~------~p~p~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~ 362 (521)
.+... .+.+++++ ...+ |..+....++++.-.++ +.|.+. .|+.. .+..
T Consensus 386 ~~~~~~~~~~~~~~~~~s~-------~~~~-l~~~~~~ig~~y~k~v~-~~y~d~---------------~f~~~-~~~~ 440 (1065)
T 2j5w_A 386 APSGIDIFTKENLTAPGSD-------SAVF-FEQGTTRIGGSYKKLVY-REYTDA---------------SFTNR-KERG 440 (1065)
T ss_dssp CTTSBCTTTCCBTTCTTCT-------THHH-HCCBTTBCCSEEEEEEE-EEESST---------------TCCSB-CCCC
T ss_pred CCCCcccccccccCCCccc-------chhh-hccCCcccCceEeeeee-ecccCC---------------ceEEc-CcCC
Confidence 76643 12222211 1111 22211122344444444 444321 11111 1111
Q ss_pred CCCCCcccceeEEecCCCcEEEEEEEcCCCCccceeecCcceEEEeec
Q 009960 363 SVNDEATRGVSVVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFG 410 (521)
Q Consensus 363 p~~~~~~~~~~~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g 410 (521)
|.......-.+++..+.|++|+++|.|.....|+||+||+.|++++.|
T Consensus 441 ~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 441 PEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp GGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCS
T ss_pred cccccccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeeccCCC
Confidence 110011123567899999999999999999999999999999987754
No 19
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.5e-54 Score=477.82 Aligned_cols=217 Identities=14% Similarity=0.197 Sum_probs=168.6
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcc--------c-CcccCCCCceEEEEEEcc-----
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSG--------T-NCPILPRKNWTYVFQVKD----- 66 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~--------~-q~~i~pG~~~~y~f~~~~----- 66 (521)
++|||+|||++||+|+|+|+|+|++++||||||+++. +.+||+|+ + ||+|+||++|+|+|++++
T Consensus 71 ~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~--~~~DG~p~~Dg~~~~~vtq~~I~PG~s~tY~f~v~~~~gP~ 148 (742)
T 2r7e_A 71 GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYW--KASEGAEYDDQTSQREKEDDKVFPGGSHTYVWQVLKENGPM 148 (742)
T ss_dssp TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCC--SSSSCCCSSCSCCSSSSSSSSCCTTCEECCEEEECGGGSCC
T ss_pred CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccC--ccccCCccCCCCcccccccCcCCCCCeEEEEEEeccccCCC
Confidence 5899999999999999999999999999999999874 34565553 5 999999999999999854
Q ss_pred ----eeeeEEEecCchh--hhcCCceecEEEeCCCCCCCCCCCCCcceeEEeee------eccCCHHHHHHHhccCCCCC
Q 009960 67 ----QIGSFFYFPSINF--QKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGD------WFYDDYKKTRSMANTSLTAY 134 (521)
Q Consensus 67 ----~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~~~~~~ 134 (521)
++||||||||.+. |+++||+|+|||+++...........+|++|++++ |+++........+... ..
T Consensus 149 ~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~~~~~~~~--~~ 226 (742)
T 2r7e_A 149 ASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAA--SA 226 (742)
T ss_dssp SSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC-------CC--SC
T ss_pred cCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccccccccccccccCCCc--cc
Confidence 4699999999875 89999999999998754321111123888888764 4443221100001111 11
Q ss_pred CCCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccc-eeeEEEcCceeEEEEecCCcccceeeeeEEecCC
Q 009960 135 NAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVF-SFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVG 213 (521)
Q Consensus 135 ~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pG 213 (521)
....+.++|||+... ..+.+++++|++|||||+|+|... .+.||||||.|+|++ ..+|++.|.||
T Consensus 227 ~~~~~~~~ING~~~~------~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg--------~~~Dtv~v~Pg 292 (742)
T 2r7e_A 227 RAWPKMHTVNGYVNR------SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRN--------HRQASLEISPI 292 (742)
T ss_dssp CCCCCCCEETTBCTB------CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETT--------EECCSCCCCTT
T ss_pred cccCceEEECCccCC------CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEe--------EecceEEeCCC
Confidence 223567899999862 246799999999999999999875 679999999999984 24789999999
Q ss_pred cEEEEEEEeCCCCcceEEEeccc
Q 009960 214 QSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 214 eR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
++++|+++++ .+|.|.++++..
T Consensus 293 ~~~~v~~~~~-~pG~w~~hCH~~ 314 (742)
T 2r7e_A 293 TFLTAQTLLM-DLGQFLLFCHIS 314 (742)
T ss_dssp CCCEEEECCC-SCSEECCCCCSS
T ss_pred cEEEEEEEeC-CCeeEEEEeCCh
Confidence 9999999998 689999988764
No 20
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=2.9e-48 Score=408.91 Aligned_cols=371 Identities=18% Similarity=0.109 Sum_probs=245.0
Q ss_pred CCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCchhhhcC
Q 009960 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAG 83 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 83 (521)
||+|+|++||+|+|+|+|.+...+++||||.... .+|+|+||++++|+|++ .++||||||||...|+.+
T Consensus 54 ~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~----------~~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~ 122 (447)
T 2dv6_A 54 NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAAR----------SAIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQA 122 (447)
T ss_dssp SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEE----------CCCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHH
T ss_pred CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCcc----------cceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhC
Confidence 8999999999999999999987899999996321 27999999999999997 569999999999899999
Q ss_pred CceecEEEeCCCCCCCC--CC---CCCcceeEEeeeeccCCHHH--HH-HHhccCCCCCCCCCCeEEEcCcCCCCCCCCC
Q 009960 84 GGFGPIRVNNRIVISVP--FP---KPEAEFDLLIGDWFYDDYKK--TR-SMANTSLTAYNAIPDVILMNGKGPFGYQMTR 155 (521)
Q Consensus 84 Gl~G~liV~~~~~~~~~--~~---~~~~e~~l~l~d~~~~~~~~--~~-~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~ 155 (521)
||+|.|+|+++...... +. ....+++..+ |+....... +. ........ .....+.++|||+...
T Consensus 123 Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~~~~~~~~~-~g~~~~~~~~NG~~pg------ 194 (447)
T 2dv6_A 123 GMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDLETVEVKGQLD-DNTTYTYWTFNGKVPG------ 194 (447)
T ss_dssp TCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEEEEEEEEEEEE-TTEEEEEEEETTBBSC------
T ss_pred CCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEEEEEEEEEecc-CCceeEEEEECCccCC------
Confidence 99999999986532110 00 0001111111 110000000 00 00000000 0013457999999632
Q ss_pred CCceEEEecCcEEEEEEEecCc-cceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCCCCcceEEEec
Q 009960 156 EPESFTVTKGMTYRFRISNVGS-VFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIVAS 234 (521)
Q Consensus 156 ~~p~~~v~~G~~~rlRliNa~~-~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~ 234 (521)
|.+++++|++|||||+|.+. ...+.+|+||. ++.||.+ +++.|.||||++++++++ .+|+||++++
T Consensus 195 --p~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~------~~~~i~pG~~~~~~~~~~-~~G~~~yh~h 261 (447)
T 2dv6_A 195 --PFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA------AFTQTDPGEETVVTFKAL-IPGIYVYHCA 261 (447)
T ss_dssp --CCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG------GGCCBCTTCEEEEEEECC-SCEEEEEECC
T ss_pred --CeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC------ccEEeCCCCEEEEEEECC-CCeEEEEEeC
Confidence 89999999999999999986 34567788774 3678873 234699999999999998 5799999997
Q ss_pred cccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCccccccccCcceEEEE
Q 009960 235 PKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNVSNVTLSQTFIL 314 (521)
Q Consensus 235 ~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l 314 (521)
....... ......+.|.|.... .+|. .+.+..+. ..+ +.... ..+ ......+
T Consensus 262 ~~~~~~~--~~~Gl~g~l~v~~~~-----~~P~----~d~~~~~~-~~~--~~~~~------~~~--------~~g~~~~ 313 (447)
T 2dv6_A 262 TPSVPTH--ITNGMYGLLLVEPEG-----GLPQ----VDREFYVM-QGE--IYTVK------SFG--------TSGEQEM 313 (447)
T ss_dssp SSSHHHH--HHTTCEEEEEEECTT-----CSCC----CSEEEEEE-EEE--ECBSS------CTT--------CCEECCB
T ss_pred CCChHHH--HhCCCEEEEEEeCCC-----CCCC----CCeeEEEE-ecc--cccCC------ccc--------ccccccC
Confidence 5211000 011234666665432 1221 11110000 000 00000 000 0000000
Q ss_pred eccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcEEEEEEEcCC-CC
Q 009960 315 QGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFNNNL-DV 393 (521)
Q Consensus 315 ~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~vi~N~~-~~ 393 (521)
............|+|||+.|... ....+.++.|++++|+|.|.+ ..
T Consensus 314 ~~~~~~~~~~~~~~iNG~~~~~~---------------------------------~~~~~~v~~g~~vrlrliN~~~~~ 360 (447)
T 2dv6_A 314 DYEKLINEKPEYFLFNGSVGSLT---------------------------------RSHPLYASVGETVRIFFGVGGPNF 360 (447)
T ss_dssp BHHHHHTTCCSEEEETTSTTCCC---------------------------------CCCCEEECTTCEEEEEEEEEESSC
T ss_pred ChHHhhccCCCEEEECCcccCCC---------------------------------CCcceEECCCCEEEEEEEeCCCCc
Confidence 00000011234689999865311 012367889999999999987 67
Q ss_pred ccceeecCcceEEEeeccccCCCCCCCCCCCCCCC-cceEEEeCCCCEEEEEEEecCCeeeEEeecchhhhhccceEEEE
Q 009960 394 IDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPV-VRSTVQVYPGGWTAVYAFLDNPGMWNLRSQLLQNWFLGQELYIR 472 (521)
Q Consensus 394 ~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~-~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~ 472 (521)
.||||||||+|+||+++++.. ..|. +|||+.|+++++++|+|+++|||.|+||||+++|++.||++.+.
T Consensus 361 ~h~~hlhGh~f~vv~~dG~~~----------~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~ 430 (447)
T 2dv6_A 361 TSSFHVIGEIFDHVYSLGSVV----------SPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLN 430 (447)
T ss_dssp CEEEEEETCCEEEECGGGCSS----------SCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEE
T ss_pred eEeEEEcCcEEEEEEcCCccc----------CCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEE
Confidence 899999999999999975432 2344 69999999999999999999999999999999999999999999
Q ss_pred EeCCC
Q 009960 473 VHNSD 477 (521)
Q Consensus 473 V~~~~ 477 (521)
|.+..
T Consensus 431 v~~~~ 435 (447)
T 2dv6_A 431 VDGPK 435 (447)
T ss_dssp ECSCS
T ss_pred EeCCC
Confidence 97654
No 21
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=2.2e-48 Score=389.72 Aligned_cols=242 Identities=23% Similarity=0.350 Sum_probs=198.7
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEecCchh
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYFPSINF 79 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~ 79 (521)
++|||+|||++||+|+|+|+|.++++++|||||+.+..+.++||+|++ ||+|+||++++|+|++ +++||||||||...
T Consensus 30 ~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~ 108 (318)
T 3g5w_A 30 QVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYHCHVNV 108 (318)
T ss_dssp BSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEECCSSH
T ss_pred ccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEc-CCCEEEEEEccCCh
Confidence 589999999999999999999999999999999998877789999998 9999999999999997 68999999999875
Q ss_pred hh---cCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCC-CCCCCCeEEEcCcCCCCCCCCC
Q 009960 80 QK---AGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTA-YNAIPDVILMNGKGPFGYQMTR 155 (521)
Q Consensus 80 q~---~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~liNG~~~~~~~~~~ 155 (521)
+. .+||+|+|||+++...+.+. ..++|++|+++||+++.... .+..+ ....++.++|||+.++.
T Consensus 109 ~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~------~~~~~~~~~~~d~~~ING~~~~~----- 176 (318)
T 3g5w_A 109 NEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANK------PGEGGIPGDVFDYYTINAKSFPE----- 176 (318)
T ss_dssp HHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTC------TTCCCCTTCCCCEEEETTBCBTS-----
T ss_pred hhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccc------cccCCCCCCcCcEEEEcCcCCCC-----
Confidence 43 58999999999865322111 35899999999998754221 11111 12257899999998742
Q ss_pred CCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcc-cceeeeeEEecCCcEEEEEEEeCCCCcceEEEec
Q 009960 156 EPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYT-NQITLRSLDVHVGQSYSVLVTADQNEADYYIVAS 234 (521)
Q Consensus 156 ~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~ 234 (521)
...+++++|++|||||+|++.. .+.||||||.|+||+.||.++ +|..+|++.|+||||+||+++++ .||.|.++++
T Consensus 177 -~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~-~pG~w~~hCH 253 (318)
T 3g5w_A 177 -TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMD-NPGLWMIHDH 253 (318)
T ss_dssp -SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC-SCSEEEEEES
T ss_pred -CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECC-CCeeEEEEec
Confidence 2459999999999999999976 569999999999999999998 78999999999999999999998 6999999998
Q ss_pred cccccCC-CCCCceeEEEEEeCCCC
Q 009960 235 PKLISTN-DSSNLVGLGVLHYSNSK 258 (521)
Q Consensus 235 ~~~~~~~-~~~~~~~~ail~y~~~~ 258 (521)
...-..+ ........++|+|++..
T Consensus 254 ~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 254 VDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp SGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred cHHHhhccCcCCCCCEEEEEECCCC
Confidence 6532210 01123456889998754
No 22
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=5.9e-47 Score=383.42 Aligned_cols=242 Identities=23% Similarity=0.376 Sum_probs=198.1
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEecCchh
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYFPSINF 79 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~ 79 (521)
++|||+|+|++||+|+|+|+|.++++++|||||+.+...+++||+|++ ||+|+||++|+|+|++ +++||||||||...
T Consensus 31 ~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~ 109 (339)
T 2zwn_A 31 QVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKA-DRIGTLWYHCHVNV 109 (339)
T ss_dssp BSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEECCSSH
T ss_pred ccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEEC-CCCEEEEEEecCCc
Confidence 589999999999999999999999999999999999888889999998 9999999999999997 68999999999864
Q ss_pred --hhc-CCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCCC-CCCCCeEEEcCcCCCCCCCCC
Q 009960 80 --QKA-GGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAY-NAIPDVILMNGKGPFGYQMTR 155 (521)
Q Consensus 80 --q~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~liNG~~~~~~~~~~ 155 (521)
|+. +||+|++||+++.....+. ..++|++++++||++.... ..+..+. ...++.++|||+.+..
T Consensus 110 ~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~------~~~~~g~~~~~~~~~~ING~~~~~----- 177 (339)
T 2zwn_A 110 NEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVAD------KYGEGGTPMNVADYFSVNAKSFPL----- 177 (339)
T ss_dssp HHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTT------CTTCCCSTTSCCCEEEETTBCTTS-----
T ss_pred hhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheeccccc------ccCCCCCCccccceEEEccccCCC-----
Confidence 888 9999999999865422111 3478999999999873211 0111111 1257899999998742
Q ss_pred CCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCccc-ceeeeeEEecCCcEEEEEEEeCCCCcceEEEec
Q 009960 156 EPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTN-QITLRSLDVHVGQSYSVLVTADQNEADYYIVAS 234 (521)
Q Consensus 156 ~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~-p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~ 234 (521)
.+.+++++|++|||||+|++.. .++|||+||+|+||+.||.+++ |..+|++.|+||||+||+|+++ .+|.|.++++
T Consensus 178 -~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~-~pG~w~~hch 254 (339)
T 2zwn_A 178 -TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEAD-NPGRFIFHDH 254 (339)
T ss_dssp -SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC-SCSEEEEEEC
T ss_pred -cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeC-CCeeEEEEEe
Confidence 2459999999999999999965 7799999999999999999985 8889999999999999999998 5899999988
Q ss_pred cccccC-CCCCCceeEEEEEeCCCC
Q 009960 235 PKLIST-NDSSNLVGLGVLHYSNSK 258 (521)
Q Consensus 235 ~~~~~~-~~~~~~~~~ail~y~~~~ 258 (521)
...-.. +........++|+|++..
T Consensus 255 ~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 255 VDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp CGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred chhhcccccccCCCcEEEEEECCCC
Confidence 653211 111123447899998754
No 23
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=6e-46 Score=365.33 Aligned_cols=93 Identities=23% Similarity=0.408 Sum_probs=84.5
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcc------------ee
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKD------------QI 68 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~------------~~ 68 (521)
++|||+|||++||+|+|+|+|.++++++|||||+.+. .++||++..||+|+||++|+|+|++++ ++
T Consensus 32 ~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~--~~~DG~~~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~ 109 (276)
T 3kw8_A 32 SVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSA 109 (276)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTTCSBCTTCEEEEEEECCCCEECTTSCEECCSC
T ss_pred cccCCeEEEECCCEEEEEEEECCCCCccEeecCcccC--CccCCCcCCcCCCCCCCEEEEEEEcCCccccccCccCCCCC
Confidence 5899999999999999999999999999999999875 469999933999999999999999853 37
Q ss_pred eeEEEecCch------hhhcCCceecEEEeCCC
Q 009960 69 GSFFYFPSIN------FQKAGGGFGPIRVNNRI 95 (521)
Q Consensus 69 Gt~wYH~H~~------~q~~~Gl~G~liV~~~~ 95 (521)
||||||||.. .|+++||+|+|||+++.
T Consensus 110 gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~ 142 (276)
T 3kw8_A 110 GYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 142 (276)
T ss_dssp EEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred EEEEEecCccccccchhhhhCccEEEEEEecCC
Confidence 9999999984 68999999999999865
No 24
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=4.5e-45 Score=418.10 Aligned_cols=385 Identities=14% Similarity=0.149 Sum_probs=252.9
Q ss_pred CCCC--CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCC-CCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCc
Q 009960 1 MFPG--PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRL-NSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSI 77 (521)
Q Consensus 1 ~~PG--P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~-~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~ 77 (521)
++|| |+|+|++||+|+++|.|. .+.+||||+++.+ +.++||++.+.|+|.||.+++|+|++ .++||||||||.
T Consensus 626 ~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~pg~~~t~~~~~-~~~Gt~~~h~h~ 701 (1065)
T 2j5w_A 626 FMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDTANLFPQTSLTLHMWP-DTEGTFNVECLT 701 (1065)
T ss_dssp BCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESEEEECTTCEEEEEECC-CSCEEEEEEECS
T ss_pred EecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecceEeecCCceEEEEEec-CCCeEEEEecCC
Confidence 4678 889999999999999976 4559999999988 89999998778999999999999996 689999999999
Q ss_pred hhhhcCCceecEEEeCCCCCCCCCCCCCcceeEEe----eeeccCCHHHHHHHhccCCCCCCCCCCeEEEcCcCC-----
Q 009960 78 NFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLI----GDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGP----- 148 (521)
Q Consensus 78 ~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~----- 148 (521)
..|+.+||.|.++|++......+...++.|.+++| .||++.....+...+.. ..+.. +..+++|+...
T Consensus 702 ~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~-~~~~~--p~~~~~n~~~~~iG~t 778 (1065)
T 2j5w_A 702 TDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHH-LQEQN--VSNAFLDKGEFYIGSK 778 (1065)
T ss_dssp HHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHH-HHTCC--CCCTTTCCTTTCCCSE
T ss_pred CcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccC-CCccC--ccceeecCCCccccce
Confidence 99999999999999986543334335678999999 89999776543221110 00010 22233333210
Q ss_pred -----C------CCCC-----------CCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeee
Q 009960 149 -----F------GYQM-----------TREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLR 206 (521)
Q Consensus 149 -----~------~~~~-----------~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d 206 (521)
+ .+.. ..+.|.|++++|+++++||.|... ..+.+|.||.. +... |
T Consensus 779 Y~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl~--~~~~-~--------- 845 (1065)
T 2j5w_A 779 YKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGVQ--TESS-T--------- 845 (1065)
T ss_dssp EEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSCB--CSCS-C---------
T ss_pred EeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeecccc--ccCC-C---------
Confidence 0 0000 123489999999999999999965 45577777643 3332 2
Q ss_pred eEEecCCcEEEEEEEeCCC---------CcceEEEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccc
Q 009960 207 SLDVHVGQSYSVLVTADQN---------EADYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFS 277 (521)
Q Consensus 207 ~v~l~pGeR~dv~v~~~~~---------~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~ 277 (521)
...+.||+++...+.+.+. +|.||.+.+.....+ ....+ .+.|.+...... .+..+ ..+.+..
T Consensus 846 ~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q-~~~GL--~G~liV~~~~~l----~~~~~-~~d~D~~ 917 (1065)
T 2j5w_A 846 VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKD-LYSGL--IGPLIVCRRPYL----KVFNP-RRKLEFA 917 (1065)
T ss_dssp CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHH-HHTTC--EEEEEEECCC---------CC-CCEEEEE
T ss_pred CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHh-hhccc--cceeEecCcccc----cccCC-CcceEEE
Confidence 1256799998888877642 258999876431111 00112 233333222110 00001 1122211
Q ss_pred ccc--cc-ccccccccC--CCCCCCCccccccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCc
Q 009960 278 MNQ--AK-SVRWNLTAG--AARPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSG 352 (521)
Q Consensus 278 ~~~--~~-~~~~~l~~~--~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~ 352 (521)
+.. .. ...+.+... ...+.|.. ...... .+. .....|.|||+.|..
T Consensus 918 l~~~~~d~~~~~y~~~n~~~~~~~P~~------v~~~~~-~~~------~~~~~~~iNG~~~~~---------------- 968 (1065)
T 2j5w_A 918 LLFLVFDENESWYLDDNIKTYSDHPEK------VNKDDE-EFI------ESNKMHAINGRMFGN---------------- 968 (1065)
T ss_dssp EEEEEEEGGGSTTHHHHHHHHCSCGGG------CCTTCH-HHH------HHTEEEEETTBCTTC----------------
T ss_pred EEEEeecCCcceeeccCcccccCCccc------cCcchh-hhh------ccCceEEECCccCCC----------------
Confidence 100 00 000000000 00000100 000000 000 011358899987631
Q ss_pred cccCCCCCCCCCCCCcccceeEEecCCCcEEEEEEEcCC--CCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcc
Q 009960 353 VYQLDWFPTNSVNDEATRGVSVVTGNHKGWIELVFNNNL--DVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVR 430 (521)
Q Consensus 353 ~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~vi~N~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~r 430 (521)
...+.++.|++|+|+|.|.+ .+.||||||||.|+|++++ |.||
T Consensus 969 -------------------~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p~~~ 1013 (1065)
T 2j5w_A 969 -------------------LQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSS 1013 (1065)
T ss_dssp -------------------CCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEE
T ss_pred -------------------CccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------Ccee
Confidence 11246789999999999985 6789999999999999864 4689
Q ss_pred eEEEeCCCCEEEEEEEecCCeeeEEeecchhhhhccceEEEEEeCCC
Q 009960 431 STVQVYPGGWTAVYAFLDNPGMWNLRSQLLQNWFLGQELYIRVHNSD 477 (521)
Q Consensus 431 DTv~vp~~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (521)
|||.|+|+++++|+|++||||.|+||||+++|++.|||+.|.|.+.+
T Consensus 1014 DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1014 DVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp SEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred eEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 99999999999999999999999999999999999999999998654
No 25
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=3e-44 Score=361.83 Aligned_cols=231 Identities=23% Similarity=0.297 Sum_probs=191.9
Q ss_pred CCCCCeEEEecCCEEEEEEEECCC--CCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCc-
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLD--EPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSI- 77 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~- 77 (521)
++|||+|+|++||+|+|+|+|.++ .++++||||+. .+||++. ...|.||++++|+|++ +++||||||||.
T Consensus 66 ~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~~~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~ 138 (327)
T 1kbv_A 66 DVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGGAA-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVA 138 (327)
T ss_dssp BSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGTT-TTCBCTTEEEEEEEEC-CSCEEEEEECCCS
T ss_pred ccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCCCc-ceeecCCCEEEEEEEC-CCCeEEEEEeCCC
Confidence 589999999999999999999996 58999999984 3788764 3459999999999996 679999999996
Q ss_pred --hhhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHH--------HHHHhccCCCCCCCCCCeEEEcCcC
Q 009960 78 --NFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKK--------TRSMANTSLTAYNAIPDVILMNGKG 147 (521)
Q Consensus 78 --~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--------~~~~~~~~~~~~~~~~~~~liNG~~ 147 (521)
..|+.+||+|+|||+++.. .+.+|+|++++++||+++.... +.... + ..++.++|||+.
T Consensus 139 ~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~--~-----~~~~~~~iNG~~ 207 (327)
T 1kbv_A 139 PVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAV--A-----EQPEYVVFNGHV 207 (327)
T ss_dssp SHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTCCEEECBCHHHHH--H-----TCCSEEEETTST
T ss_pred ChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccccccccccChhHhc--c-----CCCceEEEcCcc
Confidence 5899999999999998642 2246899999999999875210 11000 1 246899999999
Q ss_pred CCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCCCCc
Q 009960 148 PFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEA 227 (521)
Q Consensus 148 ~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~~~g 227 (521)
++.+ ..+.+++++|++|||||+|+|+.+.+.|||+||+|+||+.||.+++|..++++.|+||||+||+|+++ .+|
T Consensus 208 ~~~~----~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~-~pG 282 (327)
T 1kbv_A 208 GALT----GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVD-IPG 282 (327)
T ss_dssp TTTS----GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEEC-SCE
T ss_pred cCCC----CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeC-CCe
Confidence 8531 12579999999999999999998889999999999999999999999999999999999999999999 589
Q ss_pred ceEEEeccccccCCCCCCceeEEEEEeCCCC
Q 009960 228 DYYIVASPKLISTNDSSNLVGLGVLHYSNSK 258 (521)
Q Consensus 228 ~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 258 (521)
.|+|+++...... .....|+|+|.+..
T Consensus 283 ~y~l~~h~~~~~~----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 283 NYTLVDHSIFRAF----NKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEEESSTHHHH----HSSCEEEEEEESCC
T ss_pred EEEEEeccccccc----cCCcEEEEEECCCC
Confidence 9999998754321 13458999998754
No 26
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=2.1e-43 Score=357.02 Aligned_cols=107 Identities=22% Similarity=0.429 Sum_probs=90.9
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcc------------ee
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKD------------QI 68 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~------------~~ 68 (521)
++|||+|+|++||+|+|+|+|.++++++|||||+.+. .++||++..||+|.||++|+|+|++.+ ++
T Consensus 73 ~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~ 150 (343)
T 3cg8_A 73 SVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSA 150 (343)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTTCSBCTTCEEEEEEECCCCEECTTSCEECCSC
T ss_pred CccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcccccccccCCCEEEEEEEeCCCCcccccccCCCCc
Confidence 5899999999999999999999999999999999875 679999943999999999999999732 35
Q ss_pred eeEEEecCc------hhhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeee
Q 009960 69 GSFFYFPSI------NFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGD 114 (521)
Q Consensus 69 Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d 114 (521)
||||||||. ..|+.+||+|++||+++... ..|+|++|+++|
T Consensus 151 Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~~~d 197 (343)
T 3cg8_A 151 GYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIVFND 197 (343)
T ss_dssp EEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEEEET
T ss_pred eEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEEccc
Confidence 999999996 36899999999999986431 136777766654
No 27
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=5e-43 Score=346.66 Aligned_cols=206 Identities=17% Similarity=0.218 Sum_probs=179.2
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEecCch-
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYFPSIN- 78 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~- 78 (521)
++|||+|||++||+|+|+|+|.++++++|||||++ ..++||+|++ ||+|+||++++|+|++ +++||||||||..
T Consensus 62 ~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~ 137 (288)
T 3gdc_A 62 RIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSP 137 (288)
T ss_dssp BSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTTCSBCTTCEEEEEEEC-CSCEEEEEECCCSS
T ss_pred ccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccceeECCCCEEEEEEEc-CCCccEEEEecCcc
Confidence 58999999999999999999999999999999996 3679999998 9999999999999997 7899999999986
Q ss_pred --hhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEEEcCcCCCCCCCCCC
Q 009960 79 --FQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVILMNGKGPFGYQMTRE 156 (521)
Q Consensus 79 --~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~ 156 (521)
.|+.+||+|+|||+++... +..++|++|+++||+.++ +. .++.++|||+.+.. .
T Consensus 138 ~~~~~~~Gl~G~liV~~~~~~----~~~d~e~~l~~~d~~~~~----------g~-----~~~~~~iNG~~~~~-----~ 193 (288)
T 3gdc_A 138 LAPHIAKGLYGGFIVEPKEGR----PPADDEMVMVMNGYNTDG----------GD-----DNEFYSVNGLPFHF-----M 193 (288)
T ss_dssp HHHHHHTTCEEEEEEECSSCC----CCCSEEEEEEEEEECCSS----------TT-----CCSEEEETTSTTHH-----H
T ss_pred hHHHHhCcCeEEEEEeCCccC----CCCcceEEEEEeeEecCC----------CC-----CcceEEECcccccc-----c
Confidence 7899999999999986542 234799999999998762 11 35789999998721 0
Q ss_pred CceEEEecCcEEEEEEEecCccc-eeeEEEcCceeEEEEecCCcc-cceeeeeEEecCCcEEEEEEEeCCCCcceEEEec
Q 009960 157 PESFTVTKGMTYRFRISNVGSVF-SFNFRIQNHKMVLVETEGSYT-NQITLRSLDVHVGQSYSVLVTADQNEADYYIVAS 234 (521)
Q Consensus 157 ~p~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~-~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~ 234 (521)
.+.+++++|++|||||+|++... .+.|||+||.|+|++ +|..+ .|...|++.|.||||++|+++++ .||.|.+.++
T Consensus 194 ~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH 271 (288)
T 3gdc_A 194 DFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPSEYTDTISQVQGQRGILELRFP-YPGKFMFHAH 271 (288)
T ss_dssp HSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCSEEESEEEEETTCEEEEEECCC-SCEEEEEECS
T ss_pred CcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCCceeeEEEeCCCceEEEEEECC-CCEEEEEEec
Confidence 13699999999999999999654 679999999999998 45454 57889999999999999999998 7999999987
Q ss_pred cc
Q 009960 235 PK 236 (521)
Q Consensus 235 ~~ 236 (521)
..
T Consensus 272 ~~ 273 (288)
T 3gdc_A 272 KT 273 (288)
T ss_dssp SH
T ss_pred Ch
Confidence 54
No 28
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=2.7e-42 Score=345.23 Aligned_cols=196 Identities=18% Similarity=0.310 Sum_probs=168.8
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEc------------cee
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVK------------DQI 68 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~------------~~~ 68 (521)
++|||+|||++||+|+|+|+|+|++++||||||+++ .+.+||++..||+|+||++|+|+|++. .++
T Consensus 38 t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~--~~~~dG~~~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~ 115 (313)
T 3tas_A 38 TIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDY--EISSDGTKQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSA 115 (313)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBC--CGGGSCSTTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSC
T ss_pred cccCCeEEEECCCEEEEEEEECCCCCccEeecCCcC--CccCCCCccccCCcCCCCEEEEEEEeccCCccccccccCCCc
Confidence 589999999999999999999999999999999987 467999997799999999999999853 357
Q ss_pred eeEEEecCch------hhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEE
Q 009960 69 GSFFYFPSIN------FQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVIL 142 (521)
Q Consensus 69 Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l 142 (521)
||||||||.. .|+++||+|+|||+++... .+|+|++|+++||+
T Consensus 116 gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e~~l~~~d~t-------------------------- 164 (313)
T 3tas_A 116 GYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRTHTIVFNDMT-------------------------- 164 (313)
T ss_dssp EEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEEEEEEEETTE--------------------------
T ss_pred eEEEEeecCcccccchhhhhccccCceEeeccccc-----cccccceeeccchh--------------------------
Confidence 9999999964 4578999999999986531 34899999998874
Q ss_pred EcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcc---cceeeeeEEecCCcEEEEE
Q 009960 143 MNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYT---NQITLRSLDVHVGQSYSVL 219 (521)
Q Consensus 143 iNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~---~p~~~d~v~l~pGeR~dv~ 219 (521)
+||+... ..+.+.++.|++|||||+|++.. .++|||+||.|+|++.||... .|..+|++.|.||||++++
T Consensus 165 ~Ng~~~~------~~~~l~v~~Ge~vr~~liN~g~~-~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~ 237 (313)
T 3tas_A 165 INNRPAH------TGPDFEATVGDRVEFVMITHGEY-YHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQ 237 (313)
T ss_dssp ETTCCTT------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEE
T ss_pred cccCCcc------cccccccccCCEEEEEEeccccc-ceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEE
Confidence 4555442 23679999999999999999964 569999999999999999876 3678999999999999999
Q ss_pred EEeCC--CCcceEEEeccc
Q 009960 220 VTADQ--NEADYYIVASPK 236 (521)
Q Consensus 220 v~~~~--~~g~~~i~~~~~ 236 (521)
|.+.+ .||.|.+.++..
T Consensus 238 v~a~~~~nPG~w~~HCHi~ 256 (313)
T 3tas_A 238 VIAGEGVGAGAWMYHCHVQ 256 (313)
T ss_dssp EETTTTTCSEEEEEEECSH
T ss_pred EEeccCCCCEeEEEEeCCh
Confidence 98764 589999999864
No 29
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=1.4e-41 Score=337.36 Aligned_cols=196 Identities=17% Similarity=0.320 Sum_probs=168.0
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEc------------cee
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVK------------DQI 68 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~------------~~~ 68 (521)
++|||+|||++||+|+|+|+|+|++++||||||+.+ .+.+||++..||+|+||++|+|+|+++ .++
T Consensus 54 t~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~--~~~~DG~~~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~ 131 (299)
T 3t9w_A 54 TVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDY--DVNSDGTLMNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTA 131 (299)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBC--CGGGSCCTTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCC
T ss_pred CccCceEEEECCeEEEEEEEECCCCCccEEeCCccc--CCccCCCccccCccCCCCeEEEEEEeecccccCCCcCCCCCc
Confidence 589999999999999999999999999999999976 467999985599999999999999874 258
Q ss_pred eeEEEecCch------hhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEE
Q 009960 69 GSFFYFPSIN------FQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVIL 142 (521)
Q Consensus 69 Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l 142 (521)
||||||||.. .|+++||+|+|||+++.. . ..|+|+++++++| .
T Consensus 132 gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--~---~~d~e~~l~~~~~--------------------------~ 180 (299)
T 3t9w_A 132 GYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--L---LPKRQFTVVFNDM--------------------------M 180 (299)
T ss_dssp EEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--C---CCSEEEEEEEETT--------------------------E
T ss_pred eeEEEecCCcccccchhhhcccccceEEEecccc--c---Cccccceeeeeee--------------------------e
Confidence 9999999964 478899999999998643 1 3489999988665 3
Q ss_pred EcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCccc---ceeeeeEEecCCcEEEEE
Q 009960 143 MNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTN---QITLRSLDVHVGQSYSVL 219 (521)
Q Consensus 143 iNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~---p~~~d~v~l~pGeR~dv~ 219 (521)
+||+... ..+.+.++.|++|||||+|++... ++|||+||.|+|+..|+.... +..+|++.|.||||++++
T Consensus 181 ~Ng~~~~------~~p~l~v~~Ge~Vr~~liN~~~~~-HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~ 253 (299)
T 3t9w_A 181 INNRAHH------DAPTFEANLGERVEWIAIGHGSNF-HTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQ 253 (299)
T ss_dssp ETTCCTT------CCCEEEEETTCEEEEEEEEESSCC-CEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEE
T ss_pred ecCcccc------ccccceecCCCEEEEEEEeccccc-eeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEE
Confidence 6777653 247899999999999999999754 599999999999999887764 346899999999999999
Q ss_pred EEeCC--CCcceEEEeccc
Q 009960 220 VTADQ--NEADYYIVASPK 236 (521)
Q Consensus 220 v~~~~--~~g~~~i~~~~~ 236 (521)
|.+.+ .||.|.+.++..
T Consensus 254 via~~~dnPG~w~~HCHi~ 272 (299)
T 3t9w_A 254 VIAGEGVGPGMWMYHCHVQ 272 (299)
T ss_dssp EETTTTTCSEEEEEEECSH
T ss_pred EEEeeCCCCeeEEEEcCCH
Confidence 97653 589999998864
No 30
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=8.1e-41 Score=351.33 Aligned_cols=237 Identities=18% Similarity=0.250 Sum_probs=191.8
Q ss_pred CCCCCeEEEecCCEEEEEEEECCC--CCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecC--
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLD--EPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPS-- 76 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H-- 76 (521)
++|||+|+|++||+|+|+|+|.++ .++++||||+.+ +||++.+ .+|.||++++|+|++ +++||||||||
T Consensus 56 ~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~ 128 (442)
T 2zoo_A 56 TVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGAES-SFTAPGHTSTFNFKA-LNPGLYIYHCATA 128 (442)
T ss_dssp BSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCS
T ss_pred cCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCCcc-EEECCCCEEEEEEEc-CCCeEEEEecCCC
Confidence 579999999999999999999985 599999999853 6887653 369999999999996 67999999997
Q ss_pred -chhhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHH-HHH-Hhc-cCCCCCCCCCCeEEEcCcCCCCCC
Q 009960 77 -INFQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKK-TRS-MAN-TSLTAYNAIPDVILMNGKGPFGYQ 152 (521)
Q Consensus 77 -~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~-~~~-~~~-~~~~~~~~~~~~~liNG~~~~~~~ 152 (521)
...|+.+||+|+|||+++... +.+|+|++|+++||+++.... ... ... ... ....++.++|||+.+..
T Consensus 129 ~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~liNG~~~~~-- 200 (442)
T 2zoo_A 129 PVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFGEAGLQPFDMAKA--IDEDADYVVFNGSVGST-- 200 (442)
T ss_dssp SHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTTCCEEECBCHHHH--HTTCCSEEEETTSTTTT--
T ss_pred ChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCcccccccccCChhHh--ccCCCCEEEECCCcCCC--
Confidence 458999999999999976432 245899999999999875310 000 000 000 11367899999998731
Q ss_pred CCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCCCCcceEEE
Q 009960 153 MTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIV 232 (521)
Q Consensus 153 ~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~ 232 (521)
...+.+++++|++|||||+|+|....+.|||+||+|+||+.||.+++|..++++.|.||||+||+|+++ .+|.|+++
T Consensus 201 --~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~ 277 (442)
T 2zoo_A 201 --TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVE-VPGTFILV 277 (442)
T ss_dssp --SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECC-SCEEEEEE
T ss_pred --CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcC-CCCeEEEE
Confidence 012579999999999999999988888999999999999999999999999999999999999999999 58999999
Q ss_pred eccccccCCCCCCceeEEEEEeCCCCC
Q 009960 233 ASPKLISTNDSSNLVGLGVLHYSNSKS 259 (521)
Q Consensus 233 ~~~~~~~~~~~~~~~~~ail~y~~~~~ 259 (521)
++...... .....++|+|.+...
T Consensus 278 ~~~~~~~~----~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 278 DHSIFRAF----NKGALAMLKVEGPDD 300 (442)
T ss_dssp ESSTHHHH----TTSCEEEEEEESCCC
T ss_pred eccccccc----ccCceEEEEecCCCC
Confidence 98653311 234679999987653
No 31
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=9.7e-41 Score=366.14 Aligned_cols=219 Identities=18% Similarity=0.269 Sum_probs=167.9
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCccc---------CcccCCCCceEEEEEEcce----
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGT---------NCPILPRKNWTYVFQVKDQ---- 67 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~---------q~~i~pG~~~~y~f~~~~~---- 67 (521)
++|||+|||++||+|+|+|+|.|+++++|||||+++. +.+||+|++ ||+|+||++|+|+|+++++
T Consensus 65 ~~pGP~I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~ 142 (647)
T 1sdd_B 65 GILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPE 142 (647)
T ss_dssp TTSCCCEEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCC
T ss_pred CCcCceEEEeCCCEEEEEEEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCC
Confidence 5899999999999999999999999999999999874 679999863 8999999999999998654
Q ss_pred -ee----eEEEecCch--hhhcCCceecEEEeCCCCCCC--CCCCCCcceeEEee------eeccCCHHHHHHHhccCCC
Q 009960 68 -IG----SFFYFPSIN--FQKAGGGFGPIRVNNRIVISV--PFPKPEAEFDLLIG------DWFYDDYKKTRSMANTSLT 132 (521)
Q Consensus 68 -~G----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~------d~~~~~~~~~~~~~~~~~~ 132 (521)
+| |||||||.+ .|+.+||+|+|||+++..... ..+..++|++|+++ ||+++.............
T Consensus 143 ~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~- 221 (647)
T 1sdd_B 143 NPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSE- 221 (647)
T ss_dssp SSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC--------------
T ss_pred CCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCcc-
Confidence 57 999999985 799999999999998754221 12234689999999 677765432110000001
Q ss_pred CCCCCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccc-eeeEEEcCceeEEEEecCCcccceeeeeEEec
Q 009960 133 AYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVF-SFNFRIQNHKMVLVETEGSYTNQITLRSLDVH 211 (521)
Q Consensus 133 ~~~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~ 211 (521)
....++.++|||+.+. .|.++|++|++|||||+|++... .+.||+|||.|+|++.|| ..+|++.|+
T Consensus 222 -~~~~~~~~~iNG~~~~-------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~ 288 (647)
T 1sdd_B 222 -VKNSHEFHAINGMIYN-------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLL 288 (647)
T ss_dssp ---CCCEEEEETTBSSC-------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEEC
T ss_pred -hhhcCceeccCCEecC-------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEEC
Confidence 1235689999999862 27899999999999999999864 789999999999999886 478999999
Q ss_pred CCcEEEEEEEeCCCCcceEEEeccc
Q 009960 212 VGQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 212 pGeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
||||+||+|+++ .+|.|.++++..
T Consensus 289 pg~r~~v~~~~~-~pG~w~~hch~~ 312 (647)
T 1sdd_B 289 PGSFKTLEMKAS-KPGWWLLDTEVG 312 (647)
T ss_dssp TTEEEEEEEECC-SSEEEEEECCCH
T ss_pred CCeEEEEEEEec-cceEeecccCcc
Confidence 999999999999 579999998864
No 32
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=4.2e-41 Score=335.75 Aligned_cols=206 Identities=15% Similarity=0.216 Sum_probs=155.1
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcc------c---CcccCCCCceEEEEEEcce----
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSG------T---NCPILPRKNWTYVFQVKDQ---- 67 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~---q~~i~pG~~~~y~f~~~~~---- 67 (521)
++|||+|||++||+|+|+|+|.++++++|||||+++ .+.+||++. + ||+|+||++|+|+|+++++
T Consensus 56 ~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~--~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~ 133 (306)
T 1sdd_A 56 GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKY--SKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPT 133 (306)
T ss_dssp CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCC--CTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCC
T ss_pred CccCCEEEEeCCCEEEEEEEECCCCcccEeecceec--ccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCC
Confidence 479999999999999999999999999999999984 234555543 2 6999999999999998554
Q ss_pred -----eeeEEEecCchh--hhcCCceecEEEeCCCCC---CCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCCCCCC
Q 009960 68 -----IGSFFYFPSINF--QKAGGGFGPIRVNNRIVI---SVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAI 137 (521)
Q Consensus 68 -----~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~ 137 (521)
+||||||||... |+.+||+|+|||+++... ..+. ..++|++|+++||..... . ....
T Consensus 134 ~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~----------~--~~~~ 200 (306)
T 1sdd_A 134 HDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS----------W--NQTS 200 (306)
T ss_dssp SSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS----------S--SCCC
T ss_pred CCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc----------c--ccCC
Confidence 489999999775 889999999999986421 1122 358899999999853210 1 1124
Q ss_pred CCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCcc-ceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEE
Q 009960 138 PDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSV-FSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSY 216 (521)
Q Consensus 138 ~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~ 216 (521)
++.++|||+.+. ..|.+++++|++|||||+|+|.. ..+.||+|||.|++ || ..+|++.|.||||+
T Consensus 201 ~~~~~ING~~~~------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~pger~ 266 (306)
T 1sdd_A 201 SLMYTVNGYVNG------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVSATST 266 (306)
T ss_dssp CEEECSSSCCSS------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEETTCCB
T ss_pred CcceeeCCEecC------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECCCcEE
Confidence 578999999873 23789999999999999999986 56789999999885 77 35899999999999
Q ss_pred EEEEEeCCCCcceEEEeccc
Q 009960 217 SVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 217 dv~v~~~~~~g~~~i~~~~~ 236 (521)
||+|+++ .+|.|+++++..
T Consensus 267 ~v~~~~~-~pG~~~~hch~~ 285 (306)
T 1sdd_A 267 TANMTVS-PEGRWTIASLIP 285 (306)
T ss_dssp C---------CCCCCBCCST
T ss_pred EEEEEcC-CCeEEEEEeCCh
Confidence 9999998 689999998754
No 33
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=3.1e-39 Score=326.59 Aligned_cols=238 Identities=18% Similarity=0.178 Sum_probs=179.2
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCch--
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSIN-- 78 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~-- 78 (521)
++|||+|+|++||+|+|+|+|. .+++||||+++......||.+++ ..|+||++++|+|++ +++||||||||..
T Consensus 60 ~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~-~~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~ 134 (333)
T 1mzy_A 60 SIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGL-TLINPGEKVVLRFKA-TRAGAFVYHCAPGGP 134 (333)
T ss_dssp BSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGG-CCBCTTEEEEEEEEC-CSCEEEEEECCCSTT
T ss_pred ccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCce-eEeCCCCEEEEEEEC-CCCEEEEEeecCCcc
Confidence 5899999999999999999999 57899999988654445554444 249999999999997 6799999999986
Q ss_pred ---hhhcCCceecEEEeCCCCCC----CCCCCCCcceeEEeeeeccC--CHHHH----------HHHhccCCCCCCCCCC
Q 009960 79 ---FQKAGGGFGPIRVNNRIVIS----VPFPKPEAEFDLLIGDWFYD--DYKKT----------RSMANTSLTAYNAIPD 139 (521)
Q Consensus 79 ---~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~--~~~~~----------~~~~~~~~~~~~~~~~ 139 (521)
.|+.+||+|+|||+++...+ .+. .+|+|++|+++||++. ..+.+ ...+.. . ....++
T Consensus 135 ~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~--~~~~~~ 210 (333)
T 1mzy_A 135 MIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAV-M--DTLIPS 210 (333)
T ss_dssp HHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHH-H--TTTCCS
T ss_pred cchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeeccCccccccccccccccccccchhHH-h--hccCCc
Confidence 69999999999999764321 122 4589999999999983 11111 000000 0 113578
Q ss_pred eEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccc-e-eeeeEEecCCcEEE
Q 009960 140 VILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQ-I-TLRSLDVHVGQSYS 217 (521)
Q Consensus 140 ~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p-~-~~d~v~l~pGeR~d 217 (521)
.++|||+.+.. ...+.++|++|++||||++|++....+ ..+++|.|+|++ ||.++++ . .+|++.|.||||+|
T Consensus 211 ~~~ING~~~~~----~~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~ 284 (333)
T 1mzy_A 211 HIVFNGAVGAL----TGEGALKAKVGDNVLFVHSQPNRDSRP-HLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGA 284 (333)
T ss_dssp EEEETTSTTTT----SGGGCEEEETTCEEEEEEEESSSCBCE-EEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEE
T ss_pred EEEECCccccc----CCCcceEecCCCEEEEEECCCCCcccc-EEECCCCeEEEe-CCcccCCCccCcceEEECCCceEE
Confidence 99999998531 012679999999988877665543332 347899999999 9999864 3 48999999999999
Q ss_pred EEEEeCCCCcceEEEeccccccCCCCCCceeEEEEEeCCCC
Q 009960 218 VLVTADQNEADYYIVASPKLISTNDSSNLVGLGVLHYSNSK 258 (521)
Q Consensus 218 v~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 258 (521)
|+|+++ .+|+|+++++...... .....++++|.+..
T Consensus 285 v~v~a~-~pG~y~~~ch~~~h~~----~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 285 ALYKFL-QPGVYAYVNHNLIEAV----HKGATAHVLVEGEW 320 (333)
T ss_dssp EEEECC-SCEEEEEEESSHHHHH----TTCCEEEEEEESCC
T ss_pred EEEEcC-CCEEEEEecChhhhHh----hCCCEEEEEEcCCC
Confidence 999999 5899999998753210 13456899997654
No 34
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=5.8e-39 Score=325.17 Aligned_cols=237 Identities=18% Similarity=0.185 Sum_probs=176.7
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCch--
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSIN-- 78 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~-- 78 (521)
++|||+|+|++||+|+|+|+|.+. ++||||+++.+..++||.+.+ ..|.||++++|+|++ +++||||||||..
T Consensus 61 ~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~-~~i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~ 135 (336)
T 1oe1_A 61 SMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL-TNVNPGEQATLRFKA-DRSGTFVYHCAPEGM 135 (336)
T ss_dssp BSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTC
T ss_pred ccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce-EEeCCCCEEEEEEEC-CCCeEEEEecCCCCc
Confidence 589999999999999999999973 345565555544456665544 239999999999997 6799999999974
Q ss_pred --hhhcCCceecEEEeCCCCCC----CCCCCCCcceeEEeeeeccCCH--HHHH----------HHhccCCCCCCCCCCe
Q 009960 79 --FQKAGGGFGPIRVNNRIVIS----VPFPKPEAEFDLLIGDWFYDDY--KKTR----------SMANTSLTAYNAIPDV 140 (521)
Q Consensus 79 --~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~~~--~~~~----------~~~~~~~~~~~~~~~~ 140 (521)
.|+.+||+|+|||+++.+.+ .+. .+|+|++|+++||++..+ +.+. ..+.. . ....++.
T Consensus 136 ~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~--~~~~~~~ 211 (336)
T 1oe1_A 136 VPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQV-M--RTLTPSH 211 (336)
T ss_dssp HHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHH-H--HTTCCSE
T ss_pred hhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeeccccCCceeecccccccccchhhH-h--hcCCCCE
Confidence 69999999999999865321 122 458999999999998421 1110 00000 0 1136789
Q ss_pred EEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEE-EcCceeEEEEecCCcccce--eeeeEEecCCcEEE
Q 009960 141 ILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFR-IQNHKMVLVETEGSYTNQI--TLRSLDVHVGQSYS 217 (521)
Q Consensus 141 ~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~-i~gh~~~via~DG~~~~p~--~~d~v~l~pGeR~d 217 (521)
++|||+.+..+. .+.++|++|++||| +|++..+.+.++ |++|.|+|++ ||.+++|. .++++.|++|||+|
T Consensus 212 ~liNG~~~~~~~----~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~d 284 (336)
T 1oe1_A 212 IVFNGKVGALTG----ANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGA 284 (336)
T ss_dssp EEETTSTTTTSG----GGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEE
T ss_pred EEECCeeccCCC----CcceEcCCCCEEEE--EecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEE
Confidence 999999874211 27899999997765 676666655555 5999999997 99999764 36899999999999
Q ss_pred EEEEeCCCCcceEEEeccccccCCCCCCceeEEEEEeCCCC
Q 009960 218 VLVTADQNEADYYIVASPKLISTNDSSNLVGLGVLHYSNSK 258 (521)
Q Consensus 218 v~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 258 (521)
|+|++++ +|.|+++++...... .....|+++|.+..
T Consensus 285 vlv~~~~-pG~y~~~~h~~~~~~----~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 285 ALYTFKQ-PGVYAYLNHNLIEAF----ELGAAGHIKVEGKW 320 (336)
T ss_dssp EEEECCS-CEEEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred EEEEcCC-CceEEEEechhhccc----cCCCeEEEEECCCC
Confidence 9999995 899999998653211 13456899998754
No 35
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.8e-38 Score=322.14 Aligned_cols=238 Identities=17% Similarity=0.170 Sum_probs=176.3
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCch--
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSIN-- 78 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~-- 78 (521)
++|||+|+|++||+|+|+|+|.+ +++||||+++.+....||...+ ..|.||++++|+|++ .++||||||||..
T Consensus 67 ~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~~-~~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~ 141 (340)
T 2bw4_A 67 SVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGAL-TQVNPGEETTLRFKA-TKPGVFVYHCAPEGM 141 (340)
T ss_dssp BSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGGG-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTC
T ss_pred CCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCccc-eEeCCCCEEEEEEEC-CCCeEEEEEcCCCCc
Confidence 58999999999999999999998 6789999987654434443333 349999999999997 5799999999975
Q ss_pred --hhhcCCceecEEEeCCCCCC----CCCCCCCcceeEEeeeeccC--CHHHH----------HHHhccCCCCCCCCCCe
Q 009960 79 --FQKAGGGFGPIRVNNRIVIS----VPFPKPEAEFDLLIGDWFYD--DYKKT----------RSMANTSLTAYNAIPDV 140 (521)
Q Consensus 79 --~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~--~~~~~----------~~~~~~~~~~~~~~~~~ 140 (521)
.|+.+||+|+|||+++...+ .+. .+++|++|+++||++. ..+.+ ....+. . ....++.
T Consensus 142 ~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~-~--~~~~~~~ 217 (340)
T 2bw4_A 142 VPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKA-M--RTLTPTH 217 (340)
T ss_dssp HHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHH-H--HTTCCSE
T ss_pred hhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeeccccCCcccccccccccccchhhH-h--hcCCCCE
Confidence 69999999999999865321 122 4589999999999983 21111 000000 0 0125689
Q ss_pred EEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccc-e-eeeeEEecCCcEEEE
Q 009960 141 ILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQ-I-TLRSLDVHVGQSYSV 218 (521)
Q Consensus 141 ~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p-~-~~d~v~l~pGeR~dv 218 (521)
++|||+.+.. ...+.++|++|++|||+++|++...+ ..++++|.|+|++ ||.++.+ . .++++.|.||||+||
T Consensus 218 ~~iNG~~~~~----~~~~~l~v~~G~r~Rl~n~~~~~~~~-~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v 291 (340)
T 2bw4_A 218 IVFNGAVGAL----TGDHALTAAVGERVLVVHSQANRDTR-PHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAA 291 (340)
T ss_dssp EEETTSTTTT----SGGGCEEEETTCEEEEEEEESSSCBC-EEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEE
T ss_pred EEECCccCCc----cCCCceEcCCCCEEEEEECCCCCccc-eEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEE
Confidence 9999998631 01378999999988776665543333 3358999999997 9998854 3 479999999999999
Q ss_pred EEEeCCCCcceEEEeccccccCCCCCCceeEEEEEeCCCC
Q 009960 219 LVTADQNEADYYIVASPKLISTNDSSNLVGLGVLHYSNSK 258 (521)
Q Consensus 219 ~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 258 (521)
+|++++ +|+|+++++...... .....++++|.+..
T Consensus 292 ~v~~~~-pG~y~~~~h~~~~h~----~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 292 FYTFRQ-PGVYAYVNHNLIEAF----ELGAAGHFKVTGEW 326 (340)
T ss_dssp EEECCS-CEEEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred EEECCC-CeeeEEEcCchHHHH----hCCCEEEEEECCCC
Confidence 999995 899999998752111 12345889997654
No 36
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=3e-39 Score=356.43 Aligned_cols=221 Identities=14% Similarity=0.214 Sum_probs=176.6
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcc---------eeeeE
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKD---------QIGSF 71 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~---------~~Gt~ 71 (521)
++|||+|||++||+|+|+|+|.++++++|||||+++..... ||+++.||+|+||++|+|+|++++ ++|||
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~ 273 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAW 273 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEE
T ss_pred CCCCCeEEEEcCCEEEEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeE
Confidence 47999999999999999999999999999999999876643 699888999999999999999864 79999
Q ss_pred EEecCchh--hhcCCceecEEEeCCCCCCC--CCCCCCcceeEEeee------eccCCHHHHHHHhcc-C-CCC----CC
Q 009960 72 FYFPSINF--QKAGGGFGPIRVNNRIVISV--PFPKPEAEFDLLIGD------WFYDDYKKTRSMANT-S-LTA----YN 135 (521)
Q Consensus 72 wYH~H~~~--q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~-~-~~~----~~ 135 (521)
|||||.+. |+++||+|+|||+++..... .....++|++|++++ |+++... ..+... . ... ..
T Consensus 274 wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~--~~~~~~p~~~~~~d~~~~ 351 (770)
T 2r7e_B 274 AYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENM--ERNCRAPCNIQMEDPTFK 351 (770)
T ss_dssp EECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGG--SSCSCCSSCCCSSSSSST
T ss_pred EeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccch--hhcccCccccccCCcccc
Confidence 99999875 89999999999998753221 112457899988765 4443221 101100 0 000 01
Q ss_pred CCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCcc-ceeeEEEcCceeEEEEecCCcccceeeeeEEecCCc
Q 009960 136 AIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSV-FSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQ 214 (521)
Q Consensus 136 ~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGe 214 (521)
...+.++|||+.+. ..+.+++++|++|||||+|++.. ..++||||||.|+|++.||. .+|++.|.|||
T Consensus 352 ~~~~~~~ING~~~~------~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~ 420 (770)
T 2r7e_B 352 ENYRFHAINGYIMD------TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGV 420 (770)
T ss_dssp TTSCEECTTSCTTT------TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTC
T ss_pred ccCCccccCCccCC------CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCe
Confidence 12456899999862 24678999999999999999875 37799999999999999974 78999999999
Q ss_pred EEEEEEEeCCCCcceEEEeccc
Q 009960 215 SYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 215 R~dv~v~~~~~~g~~~i~~~~~ 236 (521)
|++|+|+++ .+|.|.++++..
T Consensus 421 ~~~v~~~ad-~pG~w~~hcH~~ 441 (770)
T 2r7e_B 421 FETVEMLPS-KAGIWRVECLIG 441 (770)
T ss_dssp CCEEEECCS-SCBCCCBCCCSH
T ss_pred EEEEEEEeC-CCCceEEEeccc
Confidence 999999998 689999988754
No 37
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.7e-36 Score=316.51 Aligned_cols=230 Identities=18% Similarity=0.227 Sum_probs=186.4
Q ss_pred CCCCCeEEEecCCEEEEEEEECCC--CCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCch
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLD--EPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSIN 78 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~ 78 (521)
++|||+|+|++||+|+|||.|.++ ..++|||||+. .+||+|.. ..|.||++++|.|++ +++||||||||..
T Consensus 191 ~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~-~~i~pG~~~~~~~~~-~~~G~~~yh~h~~ 263 (447)
T 2dv6_A 191 KVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAF-TQTDPGEETVVTFKA-LIPGIYVYHCATP 263 (447)
T ss_dssp BBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGG-CCBCTTCEEEEEEEC-CSCEEEEEECCSS
T ss_pred ccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCcc-EEeCCCCEEEEEEEC-CCCeEEEEEeCCC
Confidence 369999999999999999999985 57999999984 37998754 239999999999997 6799999999964
Q ss_pred ---hhhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHH--------HHHHHhccCCCCCCCCCCeEEEcCcC
Q 009960 79 ---FQKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYK--------KTRSMANTSLTAYNAIPDVILMNGKG 147 (521)
Q Consensus 79 ---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~~liNG~~ 147 (521)
.|+.+||+|+|+|+++.. .+..++|++++++||++.... .+.... + ..++.++|||+.
T Consensus 264 ~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~-----~~~~~~~iNG~~ 332 (447)
T 2dv6_A 264 SVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLI--N-----EKPEYFLFNGSV 332 (447)
T ss_dssp SHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCCEECCBBHHHHH--T-----TCCSEEEETTST
T ss_pred ChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCcccccccccCChHHhh--c-----cCCCEEEECCcc
Confidence 789999999999998642 224588999999999875320 011111 1 146789999998
Q ss_pred CCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccce--eeeeEEecCCcEEEEEEEeCCC
Q 009960 148 PFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQI--TLRSLDVHVGQSYSVLVTADQN 225 (521)
Q Consensus 148 ~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~--~~d~v~l~pGeR~dv~v~~~~~ 225 (521)
+..+ ..+.+++++|++|||||+|++....++|||+||.|+||+.||.+++|. .+|++.|.||||++|+|+++ .
T Consensus 333 ~~~~----~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~-~ 407 (447)
T 2dv6_A 333 GSLT----RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKID-R 407 (447)
T ss_dssp TCCC----CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECC-S
T ss_pred cCCC----CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECC-C
Confidence 8421 114799999999999999999878889999999999999999998654 58999999999999999999 5
Q ss_pred CcceEEEeccccccCCCCCCceeEEEEEeCCCC
Q 009960 226 EADYYIVASPKLISTNDSSNLVGLGVLHYSNSK 258 (521)
Q Consensus 226 ~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 258 (521)
+|.|+++++..... .....++++|.+..
T Consensus 408 pG~~~~hch~~~h~-----~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 408 AGRYILVDHALSRL-----EHGLVGFLNVDGPK 435 (447)
T ss_dssp CEEEEEEESSGGGG-----GGTCCEEEEECSCS
T ss_pred CEEEEEEecCcCcc-----ccCCEEEEEEeCCC
Confidence 89999999875432 23346899997654
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=4.8e-37 Score=338.41 Aligned_cols=217 Identities=15% Similarity=0.162 Sum_probs=167.8
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCC-----Cccc-CcccCCCCceEEEEEEcceee-----
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDG-----VSGT-NCPILPRKNWTYVFQVKDQIG----- 69 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG-----~~~~-q~~i~pG~~~~y~f~~~~~~G----- 69 (521)
.+|||+||+++||+|+|+|+|.+++++||||||+.+. .+++|| ++++ ||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 4799999999999999999999999999999999874 456665 5555 999999999999999876544
Q ss_pred ----eEEEecCch--hhhcCCceecEEEeCCCCCC-CC-CCCCCcceeEEeeee------ccCCHHHHHHHhccC--CCC
Q 009960 70 ----SFFYFPSIN--FQKAGGGFGPIRVNNRIVIS-VP-FPKPEAEFDLLIGDW------FYDDYKKTRSMANTS--LTA 133 (521)
Q Consensus 70 ----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~l~d~------~~~~~~~~~~~~~~~--~~~ 133 (521)
|||||||.+ .|+++||+|+|||+++.... .. ....|+|++|++++| +++. .+..+.... ...
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v~~ 604 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGVQL 604 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCSCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeecccccccccccc--chhhcccCchhccc
Confidence 999999986 47899999999999864211 11 124589999999754 4321 122221100 000
Q ss_pred CC----CCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCcc-ceeeEEEcCceeEEEEecCCcccceeeeeE
Q 009960 134 YN----AIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSV-FSFNFRIQNHKMVLVETEGSYTNQITLRSL 208 (521)
Q Consensus 134 ~~----~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v 208 (521)
.. .....++|||+.+.. . .+.+++|++|||||+|+|+. ..+.|||+||.|+|+ +..+|+|
T Consensus 605 ~~~~~~~~~~~~~ING~~~~~------~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv 669 (742)
T 2r7e_A 605 EDPEFQASNIMHSINGYVFDS------L-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTL 669 (742)
T ss_dssp CCHHHHGGGCCBCTTTTCSSC------C-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSS
T ss_pred ccccccccCceeeecCcCCCC------C-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEE
Confidence 00 001247899998732 2 38999999999999998764 457999999999987 5778999
Q ss_pred EecCCcEEEEEEEeCCCCcceEEEeccc
Q 009960 209 DVHVGQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 209 ~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
.|.||||++|+|+++ .+|.|.+.++..
T Consensus 670 ~l~Pg~~~~v~~~ad-~pG~w~~hcH~~ 696 (742)
T 2r7e_A 670 TLFPFSGETVFMSME-NPGLWILGCHNS 696 (742)
T ss_dssp CCCCCSSEECCEECC-CCCCSCCEECCC
T ss_pred EECCCcEEEEEEEcC-CCeEEEEEeCCc
Confidence 999999999999998 689999999865
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=6e-30 Score=252.86 Aligned_cols=230 Identities=15% Similarity=0.143 Sum_probs=164.3
Q ss_pred CCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEE
Q 009960 138 PDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYS 217 (521)
Q Consensus 138 ~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~d 217 (521)
...|++||+... |.|++++|+++++||.|..... ..+|+||.. ..+.||.+. .+...|.||++++
T Consensus 54 ~~~~~~ng~~pg--------P~i~~~~Gd~v~v~~~N~~~~~-~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~ 118 (288)
T 3gdc_A 54 FKGWSYNGRIPG--------PTLWAREGDALRIHFTNAGAHP-HTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFT 118 (288)
T ss_dssp EEEEEETTBSSC--------CEEEEETTCEEEEEEEECSSSC-BCCEESSCC--CGGGSCCTT----STTCSBCTTCEEE
T ss_pred EEEEEECCccCC--------CcEEEeCCCEEEEEEEeCCCCc-ccEEecccc--ccccCCCCC----ccceeECCCCEEE
Confidence 358999999763 8999999999999999998754 599999975 457899764 1345789999999
Q ss_pred EEEEeCCCCcceEEEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCC
Q 009960 218 VLVTADQNEADYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNP 297 (521)
Q Consensus 218 v~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p 297 (521)
+.++++ .+|.||+.++........ .....+.|.+..... .+ + .
T Consensus 119 y~f~~~-~~Gt~~yH~H~~~~~~~~--~~Gl~G~liV~~~~~-----~~--~--~------------------------- 161 (288)
T 3gdc_A 119 YEFDAT-PFGTHLYHCHQSPLAPHI--AKGLYGGFIVEPKEG-----RP--P--A------------------------- 161 (288)
T ss_dssp EEEECC-SCEEEEEECCCSSHHHHH--HTTCEEEEEEECSSC-----CC--C--C-------------------------
T ss_pred EEEEcC-CCccEEEEecCcchHHHH--hCcCeEEEEEeCCcc-----CC--C--C-------------------------
Confidence 999996 799999999864100000 011223333322210 00 0 0
Q ss_pred CccccccccCcceEEEEeccc-c--ccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeE
Q 009960 298 QGTFNVSNVTLSQTFILQGSK-A--EISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSV 374 (521)
Q Consensus 298 ~~~~~~~~~~~~~~~~l~~~~-~--~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 374 (521)
++++.+.... . .......|+|||+.|... ...
T Consensus 162 -----------d~e~~l~~~d~~~~~g~~~~~~~iNG~~~~~~----------------------------------~~~ 196 (288)
T 3gdc_A 162 -----------DDEMVMVMNGYNTDGGDDNEFYSVNGLPFHFM----------------------------------DFP 196 (288)
T ss_dssp -----------SEEEEEEEEEECCSSTTCCSEEEETTSTTHHH----------------------------------HSC
T ss_pred -----------cceEEEEEeeEecCCCCCcceEEECccccccc----------------------------------Ccc
Confidence 0111110000 0 001224699999876311 011
Q ss_pred EecCCCcEEEEEEEcCCC--CccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCee
Q 009960 375 VTGNHKGWIELVFNNNLD--VIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGM 452 (521)
Q Consensus 375 ~~~~~g~~v~~vi~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~ 452 (521)
+.++.|++|+|.|.|.+. +.|||||||+.|+|++.+.. +..|.++||+.|+||++++|+|++++||.
T Consensus 197 l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~ 265 (288)
T 3gdc_A 197 VKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGK 265 (288)
T ss_dssp EEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEE
T ss_pred cccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEE
Confidence 467889999999999985 46999999999999985432 12357999999999999999999999999
Q ss_pred eEEeecchhhhhccceEEEEEeC
Q 009960 453 WNLRSQLLQNWFLGQELYIRVHN 475 (521)
Q Consensus 453 w~~HCHil~H~d~GMm~~~~V~~ 475 (521)
|+||||+++|++.|||..++|.+
T Consensus 266 ~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 266 FMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEEEecChHHHhcCCCEEEEEeC
Confidence 99999999999999999999963
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=3.5e-29 Score=253.10 Aligned_cols=247 Identities=17% Similarity=0.159 Sum_probs=164.3
Q ss_pred CCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEe---cCCcccceeeeeEEecCCc
Q 009960 138 PDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVET---EGSYTNQITLRSLDVHVGQ 214 (521)
Q Consensus 138 ~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~---DG~~~~p~~~d~v~l~pGe 214 (521)
...+++||+... |.|++++|+++|+||+|.+... ++||.|.+.+.+. ||.+. +....|.|||
T Consensus 23 ~~~~~~NG~~pG--------P~I~v~~Gd~v~v~v~N~l~~~---~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~ 87 (339)
T 2zwn_A 23 YKVFGFNGQVPG--------PLIHVQEGDDVIVNVTNNTSLP---HTIHWHGVHQKGTWRSDGVPG----VTQQPIEAGD 87 (339)
T ss_dssp EEEEEETTBSSC--------CEEEEETTCEEEEEEEEESSSC---BCCEEETCCCTTCGGGSCCBT----TTBCCBCTTC
T ss_pred EEEEEECCccCC--------CeEEEECCCEEEEEEEECCCCC---ccEEeCCCCcCCCcccCCCCc----cccCccCCCC
Confidence 357999999653 8999999999999999998643 3444455666664 99863 2345799999
Q ss_pred EEEEEEEeCCCCcceEEEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCC
Q 009960 215 SYSVLVTADQNEADYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAAR 294 (521)
Q Consensus 215 R~dv~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~ 294 (521)
|+++.++++ .+|+||++++.....+.......+. ++. ..... ..++.. .+.+..+. ..+ +.... ...
T Consensus 88 ~~~y~f~~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~-liV-~p~~~---~~~~~~---~d~e~~l~-l~d--~~~~~-~~~ 154 (339)
T 2zwn_A 88 SYTYKFKAD-RIGTLWYHCHVNVNEHVGVRGMWGP-LIV-DPKQP---LPIEKR---VTKDVIMM-MST--WESAV-ADK 154 (339)
T ss_dssp EEEEEEECC-SCEEEEEECCSSHHHHTTTSCCEEE-EEE-ECSSC---CTTGGG---CSEEEEEE-EEE--ECGGG-TTC
T ss_pred eEEEEEECC-CCEEEEEEecCCchhhhhcCCceEe-EEe-cCCCc---cccccc---CCceEEEE-eeh--eeccc-ccc
Confidence 999999998 6899999987532111000122222 222 22111 011110 01110000 000 00000 000
Q ss_pred CCCCccccccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeE
Q 009960 295 PNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSV 374 (521)
Q Consensus 295 p~p~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 374 (521)
+... . . .......|+|||+.|.. ...
T Consensus 155 ~~~~------g----------~---~~~~~~~~~ING~~~~~-----------------------------------~~~ 180 (339)
T 2zwn_A 155 YGEG------G----------T---PMNVADYFSVNAKSFPL-----------------------------------TQP 180 (339)
T ss_dssp TTCC------C----------S---TTSCCCEEEETTBCTTS-----------------------------------SCC
T ss_pred cCCC------C----------C---CccccceEEEccccCCC-----------------------------------ccc
Confidence 0000 0 0 00112468999976521 112
Q ss_pred EecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeE
Q 009960 375 VTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWN 454 (521)
Q Consensus 375 ~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~ 454 (521)
+.++.|++++|+|.|.+...||||||||+|+||+.++... .+|.++||+.|+||+++.|+|+++|||.|+
T Consensus 181 ~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~DG~~~----------~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~ 250 (339)
T 2zwn_A 181 LRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTHKDGLPL----------DSPYYADTVLVSPGERYDVIIEADNPGRFI 250 (339)
T ss_dssp EEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEETTEEE----------EEEEEESEEEECTTCEEEEEEECCSCSEEE
T ss_pred EEECCCCEEEEEEEeCCCceEEEEECCcEEEEEEeCCeec----------CCCcEEEEEEECCCCEEEEEEEeCCCeeEE
Confidence 5678899999999999988999999999999999965432 236789999999999999999999999999
Q ss_pred Eeecchhh------hhccceEEEEEeCC
Q 009960 455 LRSQLLQN------WFLGQELYIRVHNS 476 (521)
Q Consensus 455 ~HCHil~H------~d~GMm~~~~V~~~ 476 (521)
||||+++| ++.|||..+.+...
T Consensus 251 ~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 251 FHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred EEEechhhcccccccCCCcEEEEEECCC
Confidence 99999999 78999999999754
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=4.9e-29 Score=249.40 Aligned_cols=249 Identities=15% Similarity=0.173 Sum_probs=167.7
Q ss_pred CeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeE-EEEecCCcccceeeeeEEecCCcEEE
Q 009960 139 DVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMV-LVETEGSYTNQITLRSLDVHVGQSYS 217 (521)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~-via~DG~~~~p~~~d~v~l~pGeR~d 217 (521)
..+++||+... |.|++++|+++++||.|.... ...+|+||.... ..+.||.+. +....|.||++++
T Consensus 23 ~~~~~ng~~pG--------P~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~ 89 (318)
T 3g5w_A 23 HTFAFNGQVPA--------PLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFT 89 (318)
T ss_dssp EEEEETTBSSC--------CEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEE
T ss_pred EEEEECCccCC--------ceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEE
Confidence 57999999763 899999999999999998765 458899987654 236799763 1235789999999
Q ss_pred EEEEeCCCCcceEEEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCC
Q 009960 218 VLVTADQNEADYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNP 297 (521)
Q Consensus 218 v~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p 297 (521)
..++++ .+|+||.+++.....+.. .....+.|.+..... .+++.. .+.+..+. ..+ +...... ..
T Consensus 90 y~f~~~-~~Gt~wYH~H~~~~~~~~--~~Gl~G~lIV~~~~~---~~~~~~---~d~e~~l~-l~d--w~~~~~~-~~-- 154 (318)
T 3g5w_A 90 YKFKAE-PAGTMWYHCHVNVNEHVT--MRGMWGPLIVEPKNP---LPIEKT---VTKDYILM-LSD--WVSSWAN-KP-- 154 (318)
T ss_dssp EEEECC-SCEEEEEECCSSHHHHHH--HSCCEEEEEEECSSC---CHHHHT---CCEEEEEE-EEE--ECGGGTT-CT--
T ss_pred EEEEcC-CCEEEEEEccCChhhhhc--cCCCEEEEEEcCCCc---cccccc---ccceeEEE-EEe--ecccccc-cc--
Confidence 999997 799999998863211000 011223333332211 000000 01110000 000 0000000 00
Q ss_pred CccccccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEec
Q 009960 298 QGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTG 377 (521)
Q Consensus 298 ~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 377 (521)
. ...........|+|||+.|.. +..+.+
T Consensus 155 -~----------------~~~~~~~~~d~~~ING~~~~~-----------------------------------~~~l~v 182 (318)
T 3g5w_A 155 -G----------------EGGIPGDVFDYYTINAKSFPE-----------------------------------TQPIRV 182 (318)
T ss_dssp -T----------------CCCCTTCCCCEEEETTBCBTS-----------------------------------SCCEEE
T ss_pred -c----------------cCCCCCCcCcEEEEcCcCCCC-----------------------------------CccEEe
Confidence 0 000000112369999987621 112577
Q ss_pred CCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeEEee
Q 009960 378 NHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWNLRS 457 (521)
Q Consensus 378 ~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HC 457 (521)
+.|++++|+|.|.+...||||||||.|+||+++++.. .+|.++||+.|.||+++.|+|+++|||.|+|||
T Consensus 183 ~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~~----------~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hC 252 (318)
T 3g5w_A 183 KKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFPL----------DKPIKGDTVLIGPGERYDVILNMDNPGLWMIHD 252 (318)
T ss_dssp CTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTEEE----------EEEEEESEEEECTTCEEEEEEECCSCSEEEEEE
T ss_pred CCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCccc----------CCCccccEEEECCCCEEEEEEECCCCeeEEEEe
Confidence 8999999999999988999999999999999976432 246789999999999999999999999999999
Q ss_pred cchhhhh------ccceEEEEEeCCC
Q 009960 458 QLLQNWF------LGQELYIRVHNSD 477 (521)
Q Consensus 458 Hil~H~d------~GMm~~~~V~~~~ 477 (521)
|+++|++ .|||..++|....
T Consensus 253 H~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 253 HVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp SSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred ccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999998 6899999997644
No 42
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=1.2e-27 Score=237.21 Aligned_cols=217 Identities=14% Similarity=0.113 Sum_probs=151.9
Q ss_pred ceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCC------------C
Q 009960 158 ESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQ------------N 225 (521)
Q Consensus 158 p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~------------~ 225 (521)
|+|++++|++++++|.|.... ...+|.||..+. -+.||.++. .-.|.|||++...++++. .
T Consensus 58 P~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~ 130 (299)
T 3t9w_A 58 PVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEGT 130 (299)
T ss_dssp CCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECCC
T ss_pred ceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCCC
Confidence 999999999999999998765 448899998655 367897642 124789999999988752 4
Q ss_pred CcceEEEeccccccCCC-CCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCcccccc
Q 009960 226 EADYYIVASPKLISTND-SSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNVS 304 (521)
Q Consensus 226 ~g~~~i~~~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~ 304 (521)
+|.||...+........ .......+.|.......
T Consensus 131 ~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--------------------------------------------- 165 (299)
T 3t9w_A 131 AGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--------------------------------------------- 165 (299)
T ss_dssp CEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------------------------------------------
T ss_pred ceeEEEecCCcccccchhhhcccccceEEEecccc---------------------------------------------
Confidence 68888887643211100 00001122222211100
Q ss_pred ccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcEEE
Q 009960 305 NVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWIE 384 (521)
Q Consensus 305 ~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ 384 (521)
...++++.+... .|.+|++.|. ....+.++.|++|+
T Consensus 166 -~~~d~e~~l~~~--------~~~~Ng~~~~-----------------------------------~~p~l~v~~Ge~Vr 201 (299)
T 3t9w_A 166 -LLPKRQFTVVFN--------DMMINNRAHH-----------------------------------DAPTFEANLGERVE 201 (299)
T ss_dssp -CCCSEEEEEEEE--------TTEETTCCTT-----------------------------------CCCEEEEETTCEEE
T ss_pred -cCccccceeeee--------eeeecCcccc-----------------------------------ccccceecCCCEEE
Confidence 002344444331 3778887542 12236788999999
Q ss_pred EEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEE---EEEecCCeeeEEeecchh
Q 009960 385 LVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAV---YAFLDNPGMWNLRSQLLQ 461 (521)
Q Consensus 385 ~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~i---rf~adnpG~w~~HCHil~ 461 (521)
|+|.|.+...||||||||.|+|+.++..... ...+.++||+.|.|++...+ +|+++|||.|+|||||++
T Consensus 202 ~~liN~~~~~HpfHlHGh~F~v~~~g~~~~~--------~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~ 273 (299)
T 3t9w_A 202 WIAIGHGSNFHTFHLHGHRWLDNRTGMRTSE--------YDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQN 273 (299)
T ss_dssp EEEEEESSCCCEEEETTCCEESSSSSSCCST--------TCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHH
T ss_pred EEEEeccccceeeeEecceEEEEecccccCC--------cCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHH
Confidence 9999999999999999999999888654322 22346899999999976654 456789999999999999
Q ss_pred hhhccceEEEEEeCCCC
Q 009960 462 NWFLGQELYIRVHNSDP 478 (521)
Q Consensus 462 H~d~GMm~~~~V~~~~~ 478 (521)
|++.|||..|.|.+.+.
T Consensus 274 H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 274 HSDMGMAGMFLVRNADG 290 (299)
T ss_dssp HHHTTCEEEEEEECTTS
T ss_pred HHhcCCeEEEEEECCCC
Confidence 99999999999987654
No 43
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.94 E-value=1.6e-26 Score=230.91 Aligned_cols=219 Identities=13% Similarity=0.077 Sum_probs=153.1
Q ss_pred CceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCC------------
Q 009960 157 PESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQ------------ 224 (521)
Q Consensus 157 ~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~------------ 224 (521)
.|.|+++.|++++++|.|.... ...+|.||..+.. +.||.+.. .-.|.||+++...+++..
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~-~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYEI-SSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCCC-CccEeecCCcCCc-cCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 3899999999999999998765 4488999876543 57887641 124789999998887652
Q ss_pred CCcceEEEeccccccCCC-CCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCccccc
Q 009960 225 NEADYYIVASPKLISTND-SSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNPQGTFNV 303 (521)
Q Consensus 225 ~~g~~~i~~~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~ 303 (521)
..|.||.+.+........ .......+.|.......
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~-------------------------------------------- 149 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-------------------------------------------- 149 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--------------------------------------------
T ss_pred CceEEEEeecCcccccchhhhhccccCceEeecccc--------------------------------------------
Confidence 357788877642111000 00011122222211100
Q ss_pred cccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcEE
Q 009960 304 SNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGWI 383 (521)
Q Consensus 304 ~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 383 (521)
...++++.+..+ .|++|+..+.. ...+.++.|++|
T Consensus 150 --~~~d~e~~l~~~--------d~t~Ng~~~~~-----------------------------------~~~l~v~~Ge~v 184 (313)
T 3tas_A 150 --VLPDRTHTIVFN--------DMTINNRPAHT-----------------------------------GPDFEATVGDRV 184 (313)
T ss_dssp --BCCSEEEEEEEE--------TTEETTCCTTC-----------------------------------CCCEEEETTCEE
T ss_pred --ccccccceeecc--------chhcccCCccc-----------------------------------ccccccccCCEE
Confidence 012344444331 27888875421 112567889999
Q ss_pred EEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEe---cCCeeeEEeecch
Q 009960 384 ELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFL---DNPGMWNLRSQLL 460 (521)
Q Consensus 384 ~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~a---dnpG~w~~HCHil 460 (521)
+|+|.|.+.+.||||||||.|+|+.++.... ....+.++||+.|.|++.+.+++.+ +|||.|+|||||+
T Consensus 185 r~~liN~g~~~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~ 256 (313)
T 3tas_A 185 EFVMITHGEYYHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQ 256 (313)
T ss_dssp EEEEEEESSCCEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred EEEEecccccceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCCh
Confidence 9999999999999999999999998765321 1234679999999999998887755 6899999999999
Q ss_pred hhhhccceEEEEEeCCCCC
Q 009960 461 QNWFLGQELYIRVHNSDPN 479 (521)
Q Consensus 461 ~H~d~GMm~~~~V~~~~~~ 479 (521)
+|++.|||..|.|++++..
T Consensus 257 ~H~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 257 SHSDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp HHHHTTCEEEEEEECTTCC
T ss_pred HHHHCCCeEEEEEECCCCC
Confidence 9999999999999988754
No 44
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=2.1e-25 Score=222.24 Aligned_cols=235 Identities=16% Similarity=0.121 Sum_probs=138.5
Q ss_pred EEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCccc----ceeeeeEEecCCcEE
Q 009960 141 ILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTN----QITLRSLDVHVGQSY 216 (521)
Q Consensus 141 ~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~v~l~pGeR~ 216 (521)
.++||... |+|++++|+++++||.|... ....+|.||..+.. +.||.+.. +...+...|.||||+
T Consensus 52 ~~~n~~pG---------P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~~ 120 (306)
T 1sdd_A 52 SRTSGLLG---------PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQEY 120 (306)
T ss_dssp CSSCCSCC---------CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCEE
T ss_pred cccCCccC---------CEEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCeE
Confidence 45787655 89999999999999999875 45588888877432 68898752 223335689999999
Q ss_pred EEEEEeCCCC---------cceEEEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 009960 217 SVLVTADQNE---------ADYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWN 287 (521)
Q Consensus 217 dv~v~~~~~~---------g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~ 287 (521)
+..+++++.+ |+||++++.....+. ...+.+ ++|.+....... ...+. ..+ +++.+.
T Consensus 121 ~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q~-~~GL~G-~liV~~~~~~~~-~~~~~-----~~d------~e~~l~ 186 (306)
T 1sdd_A 121 TYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDF-NSGLIG-PLLICKKGTLTE-DGTQK-----MFE------KQHVLM 186 (306)
T ss_dssp EEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHH-HTTCCE-EEEEECTTCBCT-TSSBS-----SSC------CCCCCB
T ss_pred EEEEEeCCccCCCCCCCCceEEEEeccCCchhhh-ccCceE-EEEEccCCCCCc-cCCcC-----ccc------ceEEEE
Confidence 9999997643 699999984321110 011222 344443221100 00000 000 000000
Q ss_pred cccCCCCCCCCccccccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCC
Q 009960 288 LTAGAARPNPQGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDE 367 (521)
Q Consensus 288 l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~ 367 (521)
+.. +.-..+. .......|+|||+.|.. .|
T Consensus 187 ~~d---------------------~d~~~~~-~~~~~~~~~ING~~~~~--~p--------------------------- 215 (306)
T 1sdd_A 187 FAV---------------------FDESKSW-NQTSSLMYTVNGYVNGT--MP--------------------------- 215 (306)
T ss_dssp CCE---------------------EETTSSS-SCCCCEEECSSSCCSSC--CC---------------------------
T ss_pred EEe---------------------ccccccc-ccCCCcceeeCCEecCC--Cc---------------------------
Confidence 000 0000000 00112358899987521 11
Q ss_pred cccceeEEecCCCcEEEEEEEcCCC--CccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEE
Q 009960 368 ATRGVSVVTGNHKGWIELVFNNNLD--VIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYA 445 (521)
Q Consensus 368 ~~~~~~~~~~~~g~~v~~vi~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf 445 (521)
.+.++.|++++|+|.|.+. ..||||+||+.|++ .| .++||+.|.||+.+.|+|
T Consensus 216 ------~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~ 270 (306)
T 1sdd_A 216 ------DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANM 270 (306)
T ss_dssp ------CCCCCCC------BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC---
T ss_pred ------ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEE
Confidence 1456789999999999985 57999999999986 11 258999999999999999
Q ss_pred EecCCeeeEEeecchhhhhccceEEEEEeCC
Q 009960 446 FLDNPGMWNLRSQLLQNWFLGQELYIRVHNS 476 (521)
Q Consensus 446 ~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 476 (521)
++++||.|+||||+++|++.|||..+.|.+.
T Consensus 271 ~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 271 TVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp -----CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred EcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 9999999999999999999999999999753
No 45
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.88 E-value=3.4e-22 Score=200.88 Aligned_cols=248 Identities=17% Similarity=0.112 Sum_probs=163.3
Q ss_pred CeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCcc-ceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEE
Q 009960 139 DVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSV-FSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYS 217 (521)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~d 217 (521)
..|++||+... |.|++++|+++++|++|.... ..+.+|+||.. +.||... ...|.|||+++
T Consensus 59 ~~~~~ng~~pg--------P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~ 120 (327)
T 1kbv_A 59 RYWTFDGDVPG--------RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTST 120 (327)
T ss_dssp EEEEETTBSSC--------CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEE
T ss_pred EEEEECCccCC--------CeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEE
Confidence 47999998653 899999999999999999753 46688998863 5788642 12489999999
Q ss_pred EEEEeCCCCcceEEEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCC
Q 009960 218 VLVTADQNEADYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNP 297 (521)
Q Consensus 218 v~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p 297 (521)
+.++++ .+|.||++++............. .+++... .. .+|. .+.+..+- ..+ +..... .
T Consensus 121 y~f~~~-~~Gt~wyH~h~~~~~~~~~~Gl~-G~~iV~~-~~-----~~p~----~d~e~~l~-~~d--~~~~~~-----~ 180 (327)
T 1kbv_A 121 FSFKAL-QPGLYIYHCAVAPVGMHIANGMY-GLILVEP-KE-----GLPK----VDKEFYIV-QGD--FYTKGK-----K 180 (327)
T ss_dssp EEEECC-SCEEEEEECCCSSHHHHHHTTCE-EEEEEEC-TT-----CCCC----CSEEEEEE-EEE--ECBSSC-----T
T ss_pred EEEECC-CCeEEEEEeCCCChhhhhhcceE-EEEEEec-CC-----CCCC----CceEEEEE-eee--eeccCc-----c
Confidence 999998 58999999874311000000122 2334332 21 1221 11110000 000 101000 0
Q ss_pred CccccccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEec
Q 009960 298 QGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTG 377 (521)
Q Consensus 298 ~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 377 (521)
+ ......+............+.|||+.+... ....+.+
T Consensus 181 -~--------~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~---------------------------------~~~~l~v 218 (327)
T 1kbv_A 181 -G--------AQGLQPFDMDKAVAEQPEYVVFNGHVGALT---------------------------------GDNALKA 218 (327)
T ss_dssp -T--------CCEEECBCHHHHHHTCCSEEEETTSTTTTS---------------------------------GGGCEEE
T ss_pred -c--------cccccccChhHhccCCCceEEEcCcccCCC---------------------------------CceeEEe
Confidence 0 000000000000001124688999764210 0123578
Q ss_pred CCCcEEEEEEEcCC-CCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeEEe
Q 009960 378 NHKGWIELVFNNNL-DVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWNLR 456 (521)
Q Consensus 378 ~~g~~v~~vi~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~H 456 (521)
+.|++++|+|.|.+ ...|+||||||.|+||+.+++.. .|.++|++.|.||+.+.|.|++++||.|+||
T Consensus 219 ~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~ 287 (327)
T 1kbv_A 219 KAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPGNYTLV 287 (327)
T ss_dssp ETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCEEEEEE
T ss_pred CCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCeEEEEE
Confidence 89999999999987 57899999999999999977532 2568999999999999999999999999999
Q ss_pred ecchhhh-hccceEEEEEeCCC
Q 009960 457 SQLLQNW-FLGQELYIRVHNSD 477 (521)
Q Consensus 457 CHil~H~-d~GMm~~~~V~~~~ 477 (521)
||++.|. ..||++.+.|....
T Consensus 288 ~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 288 DHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp ESSTHHHHHSSCEEEEEEESCC
T ss_pred eccccccccCCcEEEEEECCCC
Confidence 9999995 88999999997543
No 46
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.88 E-value=3.3e-22 Score=219.11 Aligned_cols=244 Identities=14% Similarity=0.180 Sum_probs=147.5
Q ss_pred ceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCccc---c-eeeeeEEecCCcEEEEEEEeCCC-----Cc-
Q 009960 158 ESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTN---Q-ITLRSLDVHVGQSYSVLVTADQN-----EA- 227 (521)
Q Consensus 158 p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~---p-~~~d~v~l~pGeR~dv~v~~~~~-----~g- 227 (521)
|+|++++|+++++||.|.... ...+|.||.... .+.||.+.. | ..+....|.||++++..+++++. +|
T Consensus 69 P~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~ 146 (647)
T 1sdd_B 69 PVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGS 146 (647)
T ss_dssp CCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSSC
T ss_pred ceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCC
Confidence 899999999999999999864 458888887664 478998642 2 22335679999999999999864 57
Q ss_pred ---ceEEEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccc-cccccccCCCCCCCCccccc
Q 009960 228 ---DYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKS-VRWNLTAGAARPNPQGTFNV 303 (521)
Q Consensus 228 ---~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~-~~~~l~~~~~~p~p~~~~~~ 303 (521)
.||.+.+.....+- ...+.+ ++|.............|. ...+....+..... ..+.+... ..
T Consensus 147 ~c~T~wYHsH~~~~~q~-~~GL~G-~lIV~~~~~~~~~~~~~~--~~~e~~l~l~~~d~~~~w~~~~~-----~~----- 212 (647)
T 1sdd_B 147 ACRAWAYYSAVNPEKDI-HSGLIG-PLLICRKGTLDKETNMPV--DMREFVLLFMVFDEKKSWYYDKK-----PT----- 212 (647)
T ss_dssp SEEEEEEECCSSHHHHH-TTTCEE-EEEEECTTSSCTTSCCCS--SCCEEEEEEEEEEGGGSSCCC--------------
T ss_pred CceEEEEccCCCCcccc-cccCcc-CEEEeeCCCcccccCCCC--cceeEEEEEEeecCccccccccC-----cc-----
Confidence 99999986321110 012222 334333221100000111 00111111100000 00101000 00
Q ss_pred cccCcceEEE-EeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCcE
Q 009960 304 SNVTLSQTFI-LQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKGW 382 (521)
Q Consensus 304 ~~~~~~~~~~-l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 382 (521)
..+. +.... ......+.|||+.|. .| .+.++.|++
T Consensus 213 ------~~~~~~~~~~--~~~~~~~~iNG~~~~---~p---------------------------------~l~v~~G~~ 248 (647)
T 1sdd_B 213 ------RSWRRASSEV--KNSHEFHAINGMIYN---LP---------------------------------GLRMYEQEW 248 (647)
T ss_dssp -------------------CCCEEEEETTBSSC---CC---------------------------------CCEEETTCE
T ss_pred ------cccccCCcch--hhcCceeccCCEecC---CC---------------------------------CeEEcCCCE
Confidence 0000 00000 011246889998761 11 145778999
Q ss_pred EEEEEEcCCC--CccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeEEeecch
Q 009960 383 IELVFNNNLD--VIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWNLRSQLL 460 (521)
Q Consensus 383 v~~vi~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil 460 (521)
++|+|.|.+. +.||||+|||.|+|++.+ +.++||+.|.||+.+.|+|++++||.|+||||++
T Consensus 249 vrlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~ 312 (647)
T 1sdd_B 249 VRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVG 312 (647)
T ss_dssp EEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCH
T ss_pred EEEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCcc
Confidence 9999999884 489999999999999752 3479999999999999999999999999999999
Q ss_pred hhhhccceEEEEEeCCC
Q 009960 461 QNWFLGQELYIRVHNSD 477 (521)
Q Consensus 461 ~H~d~GMm~~~~V~~~~ 477 (521)
+|++.|||..|.|.+.+
T Consensus 313 ~h~~~Gm~~~~~V~~~~ 329 (647)
T 1sdd_B 313 EIQRAGMQTPFLIVDRE 329 (647)
T ss_dssp HHHTTTCEEEEEEECTT
T ss_pred cccccccccceeeeccc
Confidence 99999999999997543
No 47
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.88 E-value=2e-21 Score=196.70 Aligned_cols=259 Identities=14% Similarity=0.164 Sum_probs=157.1
Q ss_pred CCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCc-cceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEE
Q 009960 138 PDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGS-VFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSY 216 (521)
Q Consensus 138 ~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~-~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~ 216 (521)
...+++||+... |.|++++|+++|+|++|... ...+.+++++... +.||.. .. .|.|||++
T Consensus 59 ~~~~~~ng~~pg--------P~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~---~~----~i~PG~~~ 120 (340)
T 2bw4_A 59 IHAMTFNGSVPG--------PLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGA---LT----QVNPGEET 120 (340)
T ss_dssp EEEEEETTBSSC--------CEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGG---GC----CBCTTEEE
T ss_pred EEEEEECCCCCC--------CcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCcc---ce----EeCCCCEE
Confidence 357999999642 89999999999999999874 2445778877542 223322 21 39999999
Q ss_pred EEEEEeCCCCcceEEEeccccc--cCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCC
Q 009960 217 SVLVTADQNEADYYIVASPKLI--STNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAAR 294 (521)
Q Consensus 217 dv~v~~~~~~g~~~i~~~~~~~--~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~ 294 (521)
++.++++ .+|.||++++.... .+ ......+ +++.+...... ...+. |...+.+..+. ..+ +.+..
T Consensus 121 ~y~~~~~-~~Gt~wyH~h~~~~~~~~-~~~Gl~G-~~iV~~~~~~~--~~~~~-p~~~d~e~~l~-l~D--~~~~~---- 187 (340)
T 2bw4_A 121 TLRFKAT-KPGVFVYHCAPEGMVPWH-VTSGMNG-AIMVLPRDGLK--DEKGQ-PLTYDKIYYVG-EQD--FYVPK---- 187 (340)
T ss_dssp EEEEECC-SCEEEEEECCCTTCHHHH-HHTTCEE-EEEEECTBCEE--CTTSC-EECCSEEEEEE-EEE--ECCCB----
T ss_pred EEEEECC-CCeEEEEEcCCCCchhhH-HhCcCEE-EEEEccCcCcc--cccCC-CcCcceeEEEe-eee--eeecc----
Confidence 9999998 59999999985310 00 0001222 23333221100 01110 10011111100 001 10100
Q ss_pred CCCCcccc-cccc--CcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccc
Q 009960 295 PNPQGTFN-VSNV--TLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRG 371 (521)
Q Consensus 295 p~p~~~~~-~~~~--~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 371 (521)
.+.+.+. +... ..... +.. + .......|.|||+.|... .
T Consensus 188 -~~~g~~~~~~~~~~~~~~~--~~~-~-~~~~~~~~~iNG~~~~~~---------------------------------~ 229 (340)
T 2bw4_A 188 -DEAGNYKKYETPGEAYEDA--VKA-M-RTLTPTHIVFNGAVGALT---------------------------------G 229 (340)
T ss_dssp -CTTSCBCCCCSHHHHHHHH--HHH-H-HTTCCSEEEETTSTTTTS---------------------------------G
T ss_pred -ccCCcccccccccccccch--hhH-h-hcCCCCEEEECCccCCcc---------------------------------C
Confidence 0000000 0000 00000 000 0 001124689999875311 0
Q ss_pred eeEEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCC--cceEEEeCCCCEEEEEEEecC
Q 009960 372 VSVVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPV--VRSTVQVYPGGWTAVYAFLDN 449 (521)
Q Consensus 372 ~~~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~vp~~g~v~irf~adn 449 (521)
...+.++.|++++|++.|.+...|++|+|||.|+|+. .++ +. +++ ++||+.|.+|+.+.|.|.+++
T Consensus 230 ~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~-dG~-~~----------~~p~~~~dtv~l~pGer~~v~v~~~~ 297 (340)
T 2bw4_A 230 DHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWA-TGK-FR----------NPPDLDQETWLIPGGTAGAAFYTFRQ 297 (340)
T ss_dssp GGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET-TCC-TT----------SCCEEEESCCCBCTTEEEEEEEECCS
T ss_pred CCceEcCCCCEEEEEECCCCCccceEEecCcceEEeC-CCc-cc----------CCccccceEEEeCCCceEEEEEECCC
Confidence 1235778899999988888888899999999999996 322 21 122 479999999999999999999
Q ss_pred CeeeEEeecch-hhhhccceEEEEEeCCC
Q 009960 450 PGMWNLRSQLL-QNWFLGQELYIRVHNSD 477 (521)
Q Consensus 450 pG~w~~HCHil-~H~d~GMm~~~~V~~~~ 477 (521)
||.|+||||++ +|++.|||+.++|.+..
T Consensus 298 pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 298 PGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp CEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred CeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 99999999999 59999999999998644
No 48
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.85 E-value=2.4e-22 Score=221.81 Aligned_cols=246 Identities=14% Similarity=0.130 Sum_probs=152.1
Q ss_pred CCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCC---------CC
Q 009960 156 EPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQ---------NE 226 (521)
Q Consensus 156 ~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~---------~~ 226 (521)
..|.|+++.|++++++|.|.... ...+|.||..+....-||.+- + ...|.||++++..+++++ .+
T Consensus 197 pGP~Ir~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~~~~dG~~~-~----~~~I~PG~~~tY~f~~~~~~gp~~~d~~~ 270 (770)
T 2r7e_B 197 LGPYIRAEVEDNIMVTFRNQASR-PYSFYSSLISYEEDQRQGAEP-R----KNFVKPNETKTYFWKVQHHMAPTKDEFDC 270 (770)
T ss_dssp CCCCCCCCSSSCEEEEEECCSSS-CCCCCBTTCCCCCCSSSCTTT-T----SSCCCSSCEEEEECCCCSSSSCCSSCCSE
T ss_pred CCCeEEEEcCCEEEEEEEECCCC-CcceeecccccccccCCCCcC-c----cCccCCCCeEEEEEEecCccCCccCCCCC
Confidence 34899999999999999999764 558888887765544358752 1 236899999999999875 57
Q ss_pred cceEEEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCccccccc--ccc-cccccccCC--CCCCCCccc
Q 009960 227 ADYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQ--AKS-VRWNLTAGA--ARPNPQGTF 301 (521)
Q Consensus 227 g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~--~~~-~~~~l~~~~--~~p~p~~~~ 301 (521)
|.||.+.+.....+. ...+ .+.|.+....... +. ..+...+.+..+.. ... ..+.+.... ..+.|.. .
T Consensus 271 Gt~wYHsh~~~~~q~-~~GL--~G~liV~~~~~~~--~~-~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~-~ 343 (770)
T 2r7e_B 271 KAWAYSSDVDLEKDV-HSGL--IGPLLVCHTNTLN--PA-HGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCN-I 343 (770)
T ss_dssp EEEEECCCSSSSHHH-HTSC--CEEEEEECSTTSC--SS-SCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSC-C
T ss_pred eeEEeeccCCcHHHH-hCCc--eeeEEECCCcccc--cc-cCCCccceEEEEEEeecCccccchhccchhhcccCccc-c
Confidence 999998875421110 0112 2322232222110 00 00000111110000 000 000000000 0000100 0
Q ss_pred cccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEecCCCc
Q 009960 302 NVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTGNHKG 381 (521)
Q Consensus 302 ~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~ 381 (521)
. ..+.. + ......|+|||+.|. . ...+.++.|+
T Consensus 344 ~----~~d~~--~------~~~~~~~~ING~~~~--~---------------------------------~~~l~v~~Ge 376 (770)
T 2r7e_B 344 Q----MEDPT--F------KENYRFHAINGYIMD--T---------------------------------LPGLVMAQDQ 376 (770)
T ss_dssp C----SSSSS--S------TTTSCEECTTSCTTT--T---------------------------------CCCCCCCSSS
T ss_pred c----cCCcc--c------cccCCccccCCccCC--C---------------------------------CCCeEEeCCC
Confidence 0 00000 0 011224778887542 0 1124678899
Q ss_pred EEEEEEEcCCC--CccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeEEeecc
Q 009960 382 WIELVFNNNLD--VIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWNLRSQL 459 (521)
Q Consensus 382 ~v~~vi~N~~~--~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHi 459 (521)
+|+|+|.|.+. +.||||||||.|+|++.++ .++||+.|.|++++.|+|++|+||.|+||||+
T Consensus 377 ~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg----------------~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~ 440 (770)
T 2r7e_B 377 RIRWYLLSMGSNENIHSIHFSGHVFTVRKKEE----------------YKMALYNLYPGVFETVEMLPSKAGIWRVECLI 440 (770)
T ss_dssp CEEEECCCCCSSSCCCEEEBSSCCEECCSSSC----------------CEESEEECCTTCCCEEEECCSSCBCCCBCCCS
T ss_pred EEEEEEEeCCCCcceEEEEEcCCEEEEEecCC----------------ceeeEEEECCCeEEEEEEEeCCCCceEEEecc
Confidence 99999999874 4899999999999998742 27999999999999999999999999999999
Q ss_pred hhhhhccceEEEEEeCCC
Q 009960 460 LQNWFLGQELYIRVHNSD 477 (521)
Q Consensus 460 l~H~d~GMm~~~~V~~~~ 477 (521)
++|++.|||..|.|...+
T Consensus 441 ~~H~~~GM~~~~~V~s~~ 458 (770)
T 2r7e_B 441 GEHLHAGMSTLFLVYSNK 458 (770)
T ss_dssp HHHHTTBCCCCCCBCCSS
T ss_pred cccccccccccccccccc
Confidence 999999999999885433
No 49
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.84 E-value=5.6e-20 Score=185.46 Aligned_cols=261 Identities=14% Similarity=0.100 Sum_probs=151.2
Q ss_pred CeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCcc-ceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEE
Q 009960 139 DVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSV-FSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYS 217 (521)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~d 217 (521)
..+++||+... |.|++++|+++++|+.|.+.. ..+.++++++. ..||.. +.. .|.||++++
T Consensus 53 ~~~~~ng~~pg--------P~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~~----~i~PG~~~~ 114 (333)
T 1mzy_A 53 QAMTFDGSIPG--------PLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GLT----LINPGEKVV 114 (333)
T ss_dssp EEEEETTBSSC--------CEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GGC----CBCTTEEEE
T ss_pred EEEEECCccCC--------CcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--cee----EeCCCCEEE
Confidence 57999999753 899999999999999998642 23355555432 122221 221 399999999
Q ss_pred EEEEeCCCCcceEEEecccc--c-cCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCC
Q 009960 218 VLVTADQNEADYYIVASPKL--I-STNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAAR 294 (521)
Q Consensus 218 v~v~~~~~~g~~~i~~~~~~--~-~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~ 294 (521)
+.++++ .+|.||++++... . .+. .....+.-+++ .....+ .+... |...+.+..+. ..+ |.+...
T Consensus 115 y~f~~~-~~Gt~~yH~h~~~~~~~~~~-~~Gl~G~~iV~-~~~~~~--~~~~~-p~~~d~e~~l~-l~D--~~~~~~--- 182 (333)
T 1mzy_A 115 LRFKAT-RAGAFVYHCAPGGPMIPWHV-VSGMAGCIMVL-PRDGLK--DHEGK-PVRYDTVYYIG-ESD--HYIPKD--- 182 (333)
T ss_dssp EEEECC-SCEEEEEECCCSTTHHHHHH-HTTCEEEEEEE-CTTCCB--CTTSC-BCCCSEEEEEE-EEE--ECCCBC---
T ss_pred EEEECC-CCEEEEEeecCCcccchhhh-hCCCEEEEEEc-cCcCcc--ccccC-CCccchheeee-eee--eccCcc---
Confidence 999997 5999999998631 0 000 00223333333 211110 01100 10111111000 011 111000
Q ss_pred CCCCcccc-ccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCccccee
Q 009960 295 PNPQGTFN-VSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVS 373 (521)
Q Consensus 295 p~p~~~~~-~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 373 (521)
..+.+. +... . ..+.-............|.|||+.+... ...
T Consensus 183 --~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ING~~~~~~---------------------------------~~~ 225 (333)
T 1mzy_A 183 --EDGTYMRFSDP-S-EGYEDMVAVMDTLIPSHIVFNGAVGALT---------------------------------GEG 225 (333)
T ss_dssp --TTSCBCCCSSH-H-HHHHHHHHHHTTTCCSEEEETTSTTTTS---------------------------------GGG
T ss_pred --ccccccccccc-c-ccccchhHHhhccCCcEEEECCcccccC---------------------------------CCc
Confidence 000000 0000 0 0000000000001224689999764211 012
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCC-cceEEEeCCCCEEEEEEEecCCee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPV-VRSTVQVYPGGWTAVYAFLDNPGM 452 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~-~rDTv~vp~~g~v~irf~adnpG~ 452 (521)
.+.++.|++++|++.|.+...+++++|+|.|+|++ + |.+.. .|. ++||+.|.||+.+.|.|.+++||.
T Consensus 226 ~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~~---------~p~~~~dtv~l~pGer~~v~v~a~~pG~ 294 (333)
T 1mzy_A 226 ALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFHN---------APERDLETWFIRGGTAGAALYKFLQPGV 294 (333)
T ss_dssp CEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET-T-CCTTS---------CCEEEESBCCBCTTEEEEEEEECCSCEE
T ss_pred ceEecCCCEEEEEECCCCCccccEEECCCCeEEEe-C-CcccC---------CCccCcceEEECCCceEEEEEEcCCCEE
Confidence 25678899999887776666666668889999987 3 32211 122 589999999999999999999999
Q ss_pred eEEeecchhhh-hccceEEEEEeCCC
Q 009960 453 WNLRSQLLQNW-FLGQELYIRVHNSD 477 (521)
Q Consensus 453 w~~HCHil~H~-d~GMm~~~~V~~~~ 477 (521)
|+||||++.|+ +.|||..|+|....
T Consensus 295 y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 295 YAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp EEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EEEecChhhhHhhCCCEEEEEEcCCC
Confidence 99999999997 99999999998644
No 50
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.81 E-value=3.5e-19 Score=186.68 Aligned_cols=249 Identities=17% Similarity=0.114 Sum_probs=163.5
Q ss_pred CeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCcc-ceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEE
Q 009960 139 DVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSV-FSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYS 217 (521)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~d 217 (521)
..|++||+... |.|+++.|+++++||.|.... ..+.+|+||+. ..||... +..|.||++++
T Consensus 49 ~~~~~ng~~pg--------p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~ 110 (442)
T 2zoo_A 49 VFWSFGETVPG--------SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTST 110 (442)
T ss_dssp EEEEETTBSSC--------CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEE
T ss_pred EEEEECCcCCC--------CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEE
Confidence 47999999742 899999999999999998643 46689999975 4677542 23589999999
Q ss_pred EEEEeCCCCcceEEEeccccccCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCC
Q 009960 218 VLVTADQNEADYYIVASPKLISTNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARPNP 297 (521)
Q Consensus 218 v~v~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p 297 (521)
+.++++ .+|.||++++........ .....+.|.+.... .+|. .+.+..+- ..+ +......
T Consensus 111 y~f~~~-~~Gt~~yH~H~~~~~~~~--~~Gl~G~~iv~~~~-----~~~~----~d~e~~l~-l~d--~~~~~~~----- 170 (442)
T 2zoo_A 111 FNFKAL-NPGLYIYHCATAPVGMHI--ANGMYGLILVEPKE-----GLAP----VDREYYLV-QGD--FYTKGEF----- 170 (442)
T ss_dssp EEEECC-SCEEEEEECCCSSHHHHH--HTTCEEEEEEECTT-----CCCC----CSEEEEEE-EEE--ECBSSCT-----
T ss_pred EEEEcC-CCeEEEEecCCCChHHHH--hCccEEEEEEeCCC-----CCCC----CCceEEEE-eee--eeccCcc-----
Confidence 999997 699999999632110000 01123334443321 1221 11111100 001 1110000
Q ss_pred CccccccccCcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccceeEEec
Q 009960 298 QGTFNVSNVTLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGVSVVTG 377 (521)
Q Consensus 298 ~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 377 (521)
+. . ....+............+.|||+.+... ....+.+
T Consensus 171 -~~-------~-~~~~~~~~~~~~~~~~~~liNG~~~~~~---------------------------------~~~~l~v 208 (442)
T 2zoo_A 171 -GE-------A-GLQPFDMAKAIDEDADYVVFNGSVGSTT---------------------------------DENSLTA 208 (442)
T ss_dssp -TC-------C-EEECBCHHHHHTTCCSEEEETTSTTTTS---------------------------------GGGCEEE
T ss_pred -cc-------c-ccccCChhHhccCCCCEEEECCCcCCCC---------------------------------CCCceEe
Confidence 00 0 0000000000001124688999754210 0113567
Q ss_pred CCCcEEEEEEEcCC-CCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeEEe
Q 009960 378 NHKGWIELVFNNNL-DVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWNLR 456 (521)
Q Consensus 378 ~~g~~v~~vi~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~H 456 (521)
+.|++++|+|.|.+ ...|+||+||+.|.||+.+++.. .|.+.|++.|.||+.+.|.|++++||.|++|
T Consensus 209 ~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~ 277 (442)
T 2zoo_A 209 KVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPGTFILV 277 (442)
T ss_dssp ETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCEEEEEE
T ss_pred CCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCCeEEEE
Confidence 88999999999976 57899999999999999976532 2567899999999999999999999999999
Q ss_pred ecchhh-hhccceEEEEEeCCCC
Q 009960 457 SQLLQN-WFLGQELYIRVHNSDP 478 (521)
Q Consensus 457 CHil~H-~d~GMm~~~~V~~~~~ 478 (521)
||.+.| .+.||+..+.|...+.
T Consensus 278 ~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 278 DHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp ESSTHHHHTTSCEEEEEEESCCC
T ss_pred ecccccccccCceEEEEecCCCC
Confidence 999999 5999999999986553
No 51
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.80 E-value=2.5e-18 Score=173.65 Aligned_cols=258 Identities=17% Similarity=0.203 Sum_probs=154.7
Q ss_pred CeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCcc-ceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEE
Q 009960 139 DVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSV-FSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYS 217 (521)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~d 217 (521)
..|++||+... |.|++++|+++++|+.|.... ..+.++++++.. .||.. +.. .|.||++++
T Consensus 54 ~~~~~ng~~pg--------P~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~~----~i~pG~~~~ 115 (336)
T 1oe1_A 54 QAMTFNGSMPG--------PTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KLT----NVNPGEQAT 115 (336)
T ss_dssp EEEEETTBSSC--------CCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GGC----CBCTTEEEE
T ss_pred EEEEECCccCC--------CeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ceE----EeCCCCEEE
Confidence 57999998653 899999999999999998652 455889998752 33332 211 399999999
Q ss_pred EEEEeCCCCcceEEEeccccc--cCCCCCCceeEEEEEeCCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCC
Q 009960 218 VLVTADQNEADYYIVASPKLI--STNDSSNLVGLGVLHYSNSKSQVTGPLPIGPDPFDLDFSMNQAKSVRWNLTAGAARP 295 (521)
Q Consensus 218 v~v~~~~~~g~~~i~~~~~~~--~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p 295 (521)
+.++++ .+|.||++++.... .+ ......+.-|++-... .+ .+.+. +...+.+..+. ..+ |.+...
T Consensus 116 y~f~~~-~~Gt~~yH~h~~~~~~~~-~~~Gl~G~liV~~~~~-~~--~~~~~-~~~~D~e~~l~-~~D--~~~~~~---- 182 (336)
T 1oe1_A 116 LRFKAD-RSGTFVYHCAPEGMVPWH-VVSGMSGTLMVLPRDG-LK--DPQGK-PLHYDRAYTIG-EFD--LYIPKG---- 182 (336)
T ss_dssp EEEECC-SCEEEEEECCCTTCHHHH-HHTTCEEEEEEECTTC-CB--CTTSC-BCCCSEEEEEE-EEE--ECCCBC----
T ss_pred EEEECC-CCeEEEEecCCCCchhHH-HhCCCeEEEEEecCcC-Cc--ccccC-cccCCceeEee-eee--eeeccc----
Confidence 999998 59999999985310 00 0002233333332211 10 11111 11111111000 001 101000
Q ss_pred CCCccc-ccccc--CcceEEEEeccccccCCceEEEEccEEeecCCCchhhhhhhccCCccccCCCCCCCCCCCCcccce
Q 009960 296 NPQGTF-NVSNV--TLSQTFILQGSKAEISGWPRYVINNVSYLTLETPLKLADYFVNGSGVYQLDWFPTNSVNDEATRGV 372 (521)
Q Consensus 296 ~p~~~~-~~~~~--~~~~~~~l~~~~~~~~g~~~~~iNg~~f~~~~~P~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 372 (521)
+.+.+ .+... ..... +.. + .......+.|||+.+... +.
T Consensus 183 -~~g~~~~~~~~~~~~~~~--~~~-~-~~~~~~~~liNG~~~~~~---------------------------------~~ 224 (336)
T 1oe1_A 183 -PDGKYKDYATLAESYGDT--VQV-M-RTLTPSHIVFNGKVGALT---------------------------------GA 224 (336)
T ss_dssp -TTSSBCCCSSTGGGHHHH--HHH-H-HTTCCSEEEETTSTTTTS---------------------------------GG
T ss_pred -cCCceeecccccccccch--hhH-h-hcCCCCEEEECCeeccCC---------------------------------CC
Confidence 00000 00000 00000 000 0 001123688999754211 11
Q ss_pred eEEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCC--cceEEEeCCCCEEEEEEEecCC
Q 009960 373 SVVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPV--VRSTVQVYPGGWTAVYAFLDNP 450 (521)
Q Consensus 373 ~~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~vp~~g~v~irf~adnp 450 (521)
..+.++.|++++|+..+.+...+++++|||.|.|+. +++ +. +|+ +.||+.|++|+.+.+.|.+++|
T Consensus 225 ~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~-DG~-~~----------~p~~~~~dtv~i~pGer~dvlv~~~~p 292 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE-TGK-FA----------NPPQRDLETWFIRGGSAGAALYTFKQP 292 (336)
T ss_dssp GCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEET-TCC-TT----------SCCEEEESBCCBCTTEEEEEEEECCSC
T ss_pred cceEcCCCCEEEEEecCCCCccceEEECCcCceEeC-CCc-Cc----------CCccccceEEEECCCCcEEEEEEcCCC
Confidence 236778899999876666666677778999999996 332 21 122 4699999999999999999999
Q ss_pred eeeEEeecchhhh-hccceEEEEEeCCC
Q 009960 451 GMWNLRSQLLQNW-FLGQELYIRVHNSD 477 (521)
Q Consensus 451 G~w~~HCHil~H~-d~GMm~~~~V~~~~ 477 (521)
|.|+||||.+.|. +.||++.++|.+..
T Consensus 293 G~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 293 GVYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp EEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred ceEEEEechhhccccCCCeEEEEECCCC
Confidence 9999999999886 99999999998544
No 52
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.63 E-value=5.7e-17 Score=134.93 Aligned_cols=89 Identities=19% Similarity=0.254 Sum_probs=70.2
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCC--CCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCch
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLN--SWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSIN 78 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~--~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~ 78 (521)
+|++|+|++++||+|+ ++|.+..++++||||..+... ..+||.+..++.|.||++++|+|++++++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~-- 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA-- 90 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT--
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC--
Confidence 4788999999999975 679988999999999865320 0122222125789999999999986468999999999
Q ss_pred hhhcCCceecEEEeC
Q 009960 79 FQKAGGGFGPIRVNN 93 (521)
Q Consensus 79 ~q~~~Gl~G~liV~~ 93 (521)
.+..+||.|.|+|++
T Consensus 91 ~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHRGAGMVGKITVEG 105 (105)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred CchhcCCEEEEEEcC
Confidence 566889999999974
No 53
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.61 E-value=2e-14 Score=150.07 Aligned_cols=200 Identities=11% Similarity=0.096 Sum_probs=143.7
Q ss_pred CCeEEEecCCEEEEEEEECCC-CCeeEEecCcCCCCCCCCCCCcc-----c-CcccCCCCceEEEEEEcceeeeEEEecC
Q 009960 4 GPLINSTTNDFVHVNVFNNLD-EPLLFTWNGIQQRLNSWQDGVSG-----T-NCPILPRKNWTYVFQVKDQIGSFFYFPS 76 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~-----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H 76 (521)
.|+|+|++| ++++|+.|... ....+|++|..+.. .+.||.+. + ...|.|||+++..+++ +++|.||++|+
T Consensus 187 ~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~ 263 (439)
T 2xu9_A 187 RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-IAADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQAL 263 (439)
T ss_dssp SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEE
T ss_pred CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-EecCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEec
Confidence 589999999 99999999984 56899999987653 46899863 2 5569999999999997 45999999997
Q ss_pred chhh--hc-CCc--------------eecEEEe--CCCCCCCCCCCC------------CcceeEEeeeeccCCHHHHHH
Q 009960 77 INFQ--KA-GGG--------------FGPIRVN--NRIVISVPFPKP------------EAEFDLLIGDWFYDDYKKTRS 125 (521)
Q Consensus 77 ~~~q--~~-~Gl--------------~G~liV~--~~~~~~~~~~~~------------~~e~~l~l~d~~~~~~~~~~~ 125 (521)
.... .. .|| ....+++ +.. .+.+.+.. ++++.+.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~p~~l~~~~~l~~~~~~r~~~l~~~------------ 330 (439)
T 2xu9_A 264 PYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP-KPLPLPKALSPFPTLPAPVVTRRLVLTED------------ 330 (439)
T ss_dssp CCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC-CCCCCCSCCCCCCCCCCCSEEEEEEEEEE------------
T ss_pred ccccCCccccccccccccccCCCCCcceeEEEEecCCC-ccccCcccCCCcccCCCCCcceEEEEEee------------
Confidence 4311 10 122 1122222 211 11111100 011111100
Q ss_pred HhccCCCCCCCCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcc-ccee
Q 009960 126 MANTSLTAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYT-NQIT 204 (521)
Q Consensus 126 ~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~p~~ 204 (521)
. .+..|+|||+.+.. ..+.+.++.|++++|+|.|.+... ++||||||.|+|++.+|... .|..
T Consensus 331 -----~-----~g~~~~iNg~~~~~-----~~~~~~~~~g~~~~~~~~N~~~~~-HP~HLHG~~F~Vl~~~g~~~~~p~~ 394 (439)
T 2xu9_A 331 -----M-----MAARFFINGQVFDH-----RRVDLKGQAQTVEVWEVENQGDMD-HPFHLHVHPFQVLSVGGRPFPYRAW 394 (439)
T ss_dssp -----G-----GGTEEEETTBCCCT-----TCCCEEECTTCEEEEEEEECSSSC-EEEEESSCCBEEEEETTEECSSCCC
T ss_pred -----c-----cCceEeECCEECCC-----CCCceecCCCCEEEEEEEcCCCCC-CCceeCCCcEEEEeeCCCCCCCCCC
Confidence 0 01368999998742 124589999999999999997654 59999999999999999875 5888
Q ss_pred eeeEEecCCcEEEEEEEeCCCCcceEEEeccc
Q 009960 205 LRSLDVHVGQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 205 ~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
.||+.|.||+++.|.++++ .||.|.++++..
T Consensus 395 rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil 425 (439)
T 2xu9_A 395 KDVVNLKAGEVARLLVPLR-EKGRTVFHCHIV 425 (439)
T ss_dssp BSEEEECTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred eEEEEeCCCCEEEEEEEcC-CCCCEEEECCcc
Confidence 9999999999999999977 799999999864
No 54
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.60 E-value=2.1e-14 Score=150.27 Aligned_cols=209 Identities=10% Similarity=0.020 Sum_probs=133.6
Q ss_pred CCCeEEEecCCEEEEEEEECC-CCCeeEEe-cCcCCCCCCCCCCCcc-----c-CcccCCCCceEEEEEEcceeeeEEEe
Q 009960 3 PGPLINSTTNDFVHVNVFNNL-DEPLLFTW-NGIQQRLNSWQDGVSG-----T-NCPILPRKNWTYVFQVKDQIGSFFYF 74 (521)
Q Consensus 3 PGP~i~v~~Gd~v~v~~~N~l-~~~~~iH~-HG~~~~~~~~~DG~~~-----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH 74 (521)
+.|+|+|++| ++++|+.|.. .....+|+ ||..+.. ...||.+. + ...|.|||++++.++++ +.|+||++
T Consensus 191 ~~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~ 267 (451)
T 2uxt_A 191 QSPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-ISGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSIT 267 (451)
T ss_dssp ESCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-EECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEE
T ss_pred ccceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-EEeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEE
Confidence 3589999999 9999999998 45688999 8976553 46899742 2 67899999999999974 68999999
Q ss_pred cCchhhhcCCcee-----------c-EEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHHHHhccCCCCCCCCCCeEE
Q 009960 75 PSINFQKAGGGFG-----------P-IRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAYNAIPDVIL 142 (521)
Q Consensus 75 ~H~~~q~~~Gl~G-----------~-liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l 142 (521)
++........+.| + +-+....... +. ..+++..|..+..... .............|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~-~~---~~~~p~~L~~~~~~~~-------~~~~~~~~~l~~~~~ 336 (451)
T 2uxt_A 268 CGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLP-LV---TDSLPMRLLPTEIMAG-------SPIRSRDISLGDDPG 336 (451)
T ss_dssp C----------------CCCCSCCEEEEEEECSCCC--------CCCSCSSSSCCCCC-------CCSEEEEEEECSSSS
T ss_pred ecCccccccccccccccCCCCCCcceEEEEecCCCc-Cc---cccCccccCCCCCCCC-------CCcceEEEEEeeEEE
Confidence 9865322111111 1 1111110000 00 0000000000000000 000000000000477
Q ss_pred EcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcc---cceeeeeEEecCCcEEEEE
Q 009960 143 MNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYT---NQITLRSLDVHVGQSYSVL 219 (521)
Q Consensus 143 iNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~---~p~~~d~v~l~pGeR~dv~ 219 (521)
|||+.+.. ..+.+.++.|++++|+|+|. ..++||||||.|+|++.||.++ +|..+||+.| |+++.|.
T Consensus 337 iNg~~f~~-----~~~~~~~~~G~~~~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~ 406 (451)
T 2uxt_A 337 INGQLWDV-----NRIDVTAQQGTWERWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELL 406 (451)
T ss_dssp BTTBCCCT-----TCCCEEEETTCEEEEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEE
T ss_pred ECCEeCCC-----CCCcEEcCCCCEEEEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEE
Confidence 99998742 22468999999999999998 3679999999999999999875 4788999999 9999999
Q ss_pred EEeCCCCcc----eEEEeccc
Q 009960 220 VTADQNEAD----YYIVASPK 236 (521)
Q Consensus 220 v~~~~~~g~----~~i~~~~~ 236 (521)
++++ .+|. |.++++..
T Consensus 407 ~~~d-npg~~~g~w~~HCHil 426 (451)
T 2uxt_A 407 VYFG-QPSWAHFPFYFNSQTL 426 (451)
T ss_dssp EECC-SCCBTTBCEEEEESSH
T ss_pred EEeC-CCCCCCCceEEeCCch
Confidence 9998 4555 99999864
No 55
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.58 E-value=8.9e-14 Score=148.11 Aligned_cols=224 Identities=13% Similarity=0.160 Sum_probs=146.2
Q ss_pred CeEEEecCCEEEEEEEECCC-CCeeEEecCcCCCCCCCCCCCcc----c-CcccCCCCceEEEEEEcceeeeEEEecCch
Q 009960 5 PLINSTTNDFVHVNVFNNLD-EPLLFTWNGIQQRLNSWQDGVSG----T-NCPILPRKNWTYVFQVKDQIGSFFYFPSIN 78 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~ 78 (521)
|+|+|++|+++++|+.|... ....+|++|..+.. .+.||.+. + ...|.|||+++..+++++.+|.||.+++..
T Consensus 212 ~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 212 AVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPS 290 (521)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred eEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccc
Confidence 89999999999999999984 56789999987653 46899853 2 556999999999999755579999999854
Q ss_pred h---hhcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCH------H-----HHHHHhccCCCCCCCCCCeEEEc
Q 009960 79 F---QKAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDY------K-----KTRSMANTSLTAYNAIPDVILMN 144 (521)
Q Consensus 79 ~---q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~------~-----~~~~~~~~~~~~~~~~~~~~liN 144 (521)
. ....|+..+++.........+..... +. ..+.+..+... . .....+.... +.......|.||
T Consensus 291 ~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~-~~~~~~~~~~iN 367 (521)
T 1v10_A 291 NGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGADINLNLRI-GRNATTADFTIN 367 (521)
T ss_dssp SSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCE-ECCSSSSCCEES
T ss_pred cccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcceEEEEEEE-ecCCceeEEEEC
Confidence 2 12223433444332211111110000 00 00000000000 0 0000000000 000011258899
Q ss_pred CcCCCCCCC----------------CCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCc----cccee
Q 009960 145 GKGPFGYQM----------------TREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSY----TNQIT 204 (521)
Q Consensus 145 G~~~~~~~~----------------~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~----~~p~~ 204 (521)
|+.+..... ....+.+.++.|++|+++++| ...++||||||.|+|++.+|.. ..|..
T Consensus 368 g~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~ 444 (521)
T 1v10_A 368 GAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGHNFDVVRTPGSSVYNYVNPVR 444 (521)
T ss_dssp SCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSCCEEEEECTTCSCCCCSSCCE
T ss_pred CCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccceEEEEecCCCCccccCCCCe
Confidence 998742110 012467899999999999999 3456999999999999999975 35889
Q ss_pred eeeEEe-cCCcEEEEEEEeCCCCcceEEEeccc
Q 009960 205 LRSLDV-HVGQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 205 ~d~v~l-~pGeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
.||+.| .+|+++.|.++++ .||.|.++++..
T Consensus 445 rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~ 476 (521)
T 1v10_A 445 RDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHID 476 (521)
T ss_dssp ESEEECCBSSCEEEEEEECC-SCEEEEEEESCH
T ss_pred eeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChH
Confidence 999999 7999999999988 799999999864
No 56
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.57 E-value=1.7e-13 Score=145.38 Aligned_cols=227 Identities=11% Similarity=0.116 Sum_probs=147.1
Q ss_pred CCeEEEecCCEEEEEEEECCC-CCeeEEecCcCCCCCCCCCCCcc----c-CcccCCCCceEEEEEEcceeeeEEEecCc
Q 009960 4 GPLINSTTNDFVHVNVFNNLD-EPLLFTWNGIQQRLNSWQDGVSG----T-NCPILPRKNWTYVFQVKDQIGSFFYFPSI 77 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~ 77 (521)
.|+|+|++|+++++||.|... ....+|++|..+.. .+.||.+. + ...|.|||+++..+++.+.+|.||.+++.
T Consensus 184 ~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~ 262 (503)
T 1hfu_A 184 LSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQP 262 (503)
T ss_dssp CCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred ceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-EeccCccccccccCeEEEcccceEEEEEEcCCCccceeeeecc
Confidence 389999999999999999984 56789999987653 46899853 2 45699999999999975557999999885
Q ss_pred hh--h-----hcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCH--HHH---------HHHhccCCCCCCCCCC
Q 009960 78 NF--Q-----KAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDY--KKT---------RSMANTSLTAYNAIPD 139 (521)
Q Consensus 78 ~~--q-----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~--~~~---------~~~~~~~~~~~~~~~~ 139 (521)
.. + ...|+..+++.........+......+. ..+.+..+... ... ...+.-.. .. ...
T Consensus 263 ~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~-~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~--~~-~~~ 338 (503)
T 1hfu_A 263 NKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP-AQLNEADLHALIDPAAPGIPTPGAADVNLRFQL--GF-SGG 338 (503)
T ss_dssp SSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCE--EE-ETT
T ss_pred ccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-CCCccccccccCccCCCCcccCCcceEEEEEEe--ec-cCc
Confidence 31 1 2233433444332211111110000000 00000000000 000 00000000 00 012
Q ss_pred eEEEcCcCCCCCCC----------------CCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcc---
Q 009960 140 VILMNGKGPFGYQM----------------TREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYT--- 200 (521)
Q Consensus 140 ~~liNG~~~~~~~~----------------~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~--- 200 (521)
.|+|||+.+..... ....+.+.++.|++++++++|......++||||||.|+|++.+|...
T Consensus 339 ~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~ 418 (503)
T 1hfu_A 339 RFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNF 418 (503)
T ss_dssp EEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCC
T ss_pred eEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCcccc
Confidence 68999998742110 01235789999999999999543345669999999999999999752
Q ss_pred -cceeeeeEEe-cCCcEEEEEEEeCCCCcceEEEeccc
Q 009960 201 -NQITLRSLDV-HVGQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 201 -~p~~~d~v~l-~pGeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
.|...||+.| .||+++.|.++++ .||.|.++++..
T Consensus 419 ~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil 455 (503)
T 1hfu_A 419 VNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIE 455 (503)
T ss_dssp SSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCch
Confidence 5889999999 7999999999988 799999999864
No 57
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.46 E-value=7.3e-13 Score=139.70 Aligned_cols=226 Identities=13% Similarity=0.171 Sum_probs=144.7
Q ss_pred CCeEEEecCCEEEEEEEECC-CCCeeEEecCcCCCCCCCCCCCcc----c-CcccCCCCceEEEEEEcceeeeEEEecCc
Q 009960 4 GPLINSTTNDFVHVNVFNNL-DEPLLFTWNGIQQRLNSWQDGVSG----T-NCPILPRKNWTYVFQVKDQIGSFFYFPSI 77 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~ 77 (521)
-|.|+|++|+++++|+.|.. .....++++|..+.. .+.||.+. + ...|.|||+++..+++.+.+|.||..+..
T Consensus 188 ~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 266 (495)
T 3t6v_A 188 LSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANP 266 (495)
T ss_dssp CCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred ceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEec
Confidence 47899999999999999987 456789999987653 46899853 2 45699999999999975556999999864
Q ss_pred hh---hhcCCceecEEEeCCCCCCCCCCCCCc-ceeEEeeeeccCCHH-----------HHHHHhccCCCCCCCCCCeEE
Q 009960 78 NF---QKAGGGFGPIRVNNRIVISVPFPKPEA-EFDLLIGDWFYDDYK-----------KTRSMANTSLTAYNAIPDVIL 142 (521)
Q Consensus 78 ~~---q~~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~l~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l 142 (521)
.. ....|...+++.........|...... ... .+.+..+.... ..+..+.... + .....|.
T Consensus 267 ~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~-~--~~~~~w~ 342 (495)
T 3t6v_A 267 NSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQGGADCNLNLSL-G--FACGNFV 342 (495)
T ss_dssp SSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTTCSSEEEECCE-E--EETTEEE
T ss_pred ccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCCCCcEEEEEEE-E--ecCcEEE
Confidence 31 112223223443332211111100000 000 00010000000 0000000000 0 0123689
Q ss_pred EcCcCCCCCCC----------------CCCCceEEEecCcEEEEEEE-ecCccceeeEEEcCceeEEEEecCCcc----c
Q 009960 143 MNGKGPFGYQM----------------TREPESFTVTKGMTYRFRIS-NVGSVFSFNFRIQNHKMVLVETEGSYT----N 201 (521)
Q Consensus 143 iNG~~~~~~~~----------------~~~~p~~~v~~G~~~rlRli-Na~~~~~~~~~i~gh~~~via~DG~~~----~ 201 (521)
|||+.+..... ....+.+.++.|++|+|.|. |.+. ..++||+|||.|+|++.+|... .
T Consensus 343 iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~-~~HP~HLHGh~F~vl~~~g~~~~n~~~ 421 (495)
T 3t6v_A 343 INGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAG-GPHPFHLHGHDFAVSESASNSTSNYDD 421 (495)
T ss_dssp ETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSS-CCCEEEETTCCEEEEECTTCCCCCSSS
T ss_pred EcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCC-CCcceeecCCcEEEEecCCCCCcccCC
Confidence 99998742110 01235689999999999998 4444 4569999999999999988653 6
Q ss_pred ceeeeeEEecC-CcEEEEEEEeCCCCcceEEEeccc
Q 009960 202 QITLRSLDVHV-GQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 202 p~~~d~v~l~p-GeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
|...|++.|.+ |+.+.+.++++ .||.|.++++..
T Consensus 422 P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~ 456 (495)
T 3t6v_A 422 PIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHID 456 (495)
T ss_dssp CCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCH
T ss_pred CCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecch
Confidence 88999999997 99999999988 799999999864
No 58
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.43 E-value=2.9e-13 Score=132.42 Aligned_cols=92 Identities=17% Similarity=0.215 Sum_probs=78.2
Q ss_pred CCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCc-------c-c-CcccCCCCceEEEEEEcc--eeeeE
Q 009960 3 PGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVS-------G-T-NCPILPRKNWTYVFQVKD--QIGSF 71 (521)
Q Consensus 3 PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~-------~-~-q~~i~pG~~~~y~f~~~~--~~Gt~ 71 (521)
++|.|++++||+|+++|.|.....+++||||..+... .+|.. . . .+.|.||++++|.|++.. .+|+|
T Consensus 166 ~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w 243 (276)
T 3kw8_A 166 TGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAW 243 (276)
T ss_dssp CCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred CCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeE
Confidence 6899999999999999999998999999999866432 35531 1 2 566999999999999632 59999
Q ss_pred EEecCchhhhcCCceecEEEeCCCC
Q 009960 72 FYFPSINFQKAGGGFGPIRVNNRIV 96 (521)
Q Consensus 72 wYH~H~~~q~~~Gl~G~liV~~~~~ 96 (521)
|||||...+...||.|.|+|++++.
T Consensus 244 ~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 244 MYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEECCCchHhhCCCeEEEEEeCCCC
Confidence 9999999999999999999998754
No 59
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.41 E-value=4.1e-12 Score=136.38 Aligned_cols=223 Identities=9% Similarity=0.087 Sum_probs=140.5
Q ss_pred CeEEEecCCEEEEEEEECCC-CCeeEEecCcCCCCCCCCCCCcc----c-CcccCCCCceEEEEEE-cceeeeEEEecCc
Q 009960 5 PLINSTTNDFVHVNVFNNLD-EPLLFTWNGIQQRLNSWQDGVSG----T-NCPILPRKNWTYVFQV-KDQIGSFFYFPSI 77 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~~~y~f~~-~~~~Gt~wYH~H~ 77 (521)
++|+|++|+++++||.|... ....+|++|..+.. .+.||.+. + ...|.|||+++..+++ ++.+|.||-+++.
T Consensus 204 ~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~ 282 (552)
T 1aoz_A 204 YIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGT 282 (552)
T ss_dssp CCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEE
T ss_pred eEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEc
Confidence 48999999999999999974 56789999987653 46899753 2 5679999999999997 3448999999986
Q ss_pred hhhhcCCce--ecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHHHHH-HHhcc----CCC----------------CC
Q 009960 78 NFQKAGGGF--GPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYKKTR-SMANT----SLT----------------AY 134 (521)
Q Consensus 78 ~~q~~~Gl~--G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~-~~~~~----~~~----------------~~ 134 (521)
......... +.|..........+... .... ..| +...... ..+.. ... +.
T Consensus 283 ~~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~----p~~--~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~ 355 (552)
T 1aoz_A 283 RARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQT----PAW--DDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNV 355 (552)
T ss_dssp ESSCCCSCCEEEEEEETTSCTTSCCSSC-CCCC----CCT--TCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEE
T ss_pred ccCCCCCccEEEEEEECCCCCCCCCCCC-CCCC----Ccc--ccccccccccccccccCCCCCCCCCCcEEEEEEEeecc
Confidence 421111122 23333332210000000 0000 000 0000000 00000 000 00
Q ss_pred CCCCCeEEEcCcCCCCC-----------------------------CCC---------CCCceEEEecCcEEEEEEEecC
Q 009960 135 NAIPDVILMNGKGPFGY-----------------------------QMT---------REPESFTVTKGMTYRFRISNVG 176 (521)
Q Consensus 135 ~~~~~~~liNG~~~~~~-----------------------------~~~---------~~~p~~~v~~G~~~rlRliNa~ 176 (521)
......|.|||+.+... +.. .....+.++.|++++|.|.|.+
T Consensus 356 ~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~ 435 (552)
T 1aoz_A 356 INGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNAN 435 (552)
T ss_dssp ETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECC
T ss_pred CCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCc
Confidence 00112478888754210 000 0013588999999999999987
Q ss_pred cc-----ceeeEEEcCceeEEEEec-CCc----------ccceeeeeEEecCCcEEEEEEEeCCCCcceEEEeccc
Q 009960 177 SV-----FSFNFRIQNHKMVLVETE-GSY----------TNQITLRSLDVHVGQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 177 ~~-----~~~~~~i~gh~~~via~D-G~~----------~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
.. ..++||||||.|+|++.. |.+ ..|..+||+.|.+|+.+.|.++++ .||.|.++++..
T Consensus 436 ~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~HCHi~ 510 (552)
T 1aoz_A 436 MMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAFHCHIE 510 (552)
T ss_dssp CSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEEEESSH
T ss_pred ccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEEEeeeh
Confidence 52 357999999999999984 553 257789999999999999999998 799999999864
No 60
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.41 E-value=1.2e-11 Score=129.76 Aligned_cols=216 Identities=13% Similarity=0.128 Sum_probs=141.9
Q ss_pred CCeEEEecCCEEEEEEEECC-CCCeeEEecCcCCCCCCCCCCCc----c-c-CcccCCCCceEEEEEEcceeeeEEEecC
Q 009960 4 GPLINSTTNDFVHVNVFNNL-DEPLLFTWNGIQQRLNSWQDGVS----G-T-NCPILPRKNWTYVFQVKDQIGSFFYFPS 76 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~----~-~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H 76 (521)
.|+|.|++|+ ++|+.|.. .....+|++|..+. ..+.||.. . + ...|.|||+++..+++ .+.|+|-.-++
T Consensus 221 ~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~-vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~ 296 (481)
T 3zx1_A 221 KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFI-LVGTDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESA 296 (481)
T ss_dssp SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEE-EEEETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEEC
T ss_pred CceEEecCCC--EEEEEecCCCeEEEEEECCCceE-EEEcCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEe
Confidence 4799999999 99999997 56789999998755 35789742 2 2 5579999999999997 45788777665
Q ss_pred chhhhcCCce--------ecEEEeCC-CCCCCC--------CCCCCcceeEEeeeeccCCHHHHHHHhccCCCCC-CCCC
Q 009960 77 INFQKAGGGF--------GPIRVNNR-IVISVP--------FPKPEAEFDLLIGDWFYDDYKKTRSMANTSLTAY-NAIP 138 (521)
Q Consensus 77 ~~~q~~~Gl~--------G~liV~~~-~~~~~~--------~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~-~~~~ 138 (521)
.... .|+. -.+.++.. .....| .+..+....+.++....+.. .+...+..+. ....
T Consensus 297 ~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~~----~~~~~~~~~~~~~~~ 370 (481)
T 3zx1_A 297 YYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMH----GMMGKSEGELKIALA 370 (481)
T ss_dssp CCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCCCCCCCCEEEEEEEEECCSTTT----TGGGCCHHHHHHHHH
T ss_pred cccc--cCccccCCCCceeEEEEecCCCCccCCccccCCCCCCCCCcEEEEEEeccchhcc----ccccccccccccccc
Confidence 3221 1111 11112111 001111 11122333344432111000 0000000000 0001
Q ss_pred CeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEe--cCCcc---cceeeeeEEecCC
Q 009960 139 DVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVET--EGSYT---NQITLRSLDVHVG 213 (521)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~--DG~~~---~p~~~d~v~l~pG 213 (521)
..|+|||+.+.. ..+.++++.|++++|+|+|.+.. .++||||||.|+|++. ||... ++...|++.|.||
T Consensus 371 ~~~~iNG~~~~~-----~~~~~~~~~G~~v~w~l~N~~~~-~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg 444 (481)
T 3zx1_A 371 SMFLINRKSYDL-----KRIDLSSKLGVVEDWIVINKSHM-DHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPN 444 (481)
T ss_dssp TTEEETTBCCCT-----TCCCEEEETTCCEEEEEEECSSS-CEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTT
T ss_pred ceeEECCEeCCC-----CCceEEeCCCCEEEEEEEcCCCC-ceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCC
Confidence 249999998831 23679999999999999997755 5599999999999999 99876 3578999999999
Q ss_pred cEEEEEEEeCCCCcceEEEeccc
Q 009960 214 QSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 214 eR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
+++.|.++++ .+|.|.++++..
T Consensus 445 ~~~~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 445 EELRLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp CEEEEEECCC-SCEEEEEEESSH
T ss_pred CEEEEEEEcC-CCeeEEEEcCCh
Confidence 9999999997 799999999864
No 61
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.41 E-value=1.1e-11 Score=130.87 Aligned_cols=224 Identities=11% Similarity=0.162 Sum_probs=143.2
Q ss_pred CCeEEEecCCEEEEEEEECC-CCCeeEEecCcCCCCCCCCCCCcc----c-CcccCCCCceEEEEEEcceeeeEEEecCc
Q 009960 4 GPLINSTTNDFVHVNVFNNL-DEPLLFTWNGIQQRLNSWQDGVSG----T-NCPILPRKNWTYVFQVKDQIGSFFYFPSI 77 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~ 77 (521)
-|.|+|++|+++++|+.|.. .....+|++|..+.. .+.||.+. + ...|.|||+++..+++.+.+|.||-.+..
T Consensus 185 ~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 263 (499)
T 3pxl_A 185 LSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANP 263 (499)
T ss_dssp CCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred cceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEec
Confidence 47999999999999999987 456799999987653 56899853 2 45699999999999975556999998764
Q ss_pred h--hh-hcCCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCHH-----------HHHHH--hccCCCCCCCCCCeE
Q 009960 78 N--FQ-KAGGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDYK-----------KTRSM--ANTSLTAYNAIPDVI 141 (521)
Q Consensus 78 ~--~q-~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~-----------~~~~~--~~~~~~~~~~~~~~~ 141 (521)
. .+ ...|..-+++.........+......... .+.+..+.... ..+.. +..+. ....|
T Consensus 264 ~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~-----~~~~w 337 (499)
T 3pxl_A 264 NFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVK-PLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNF-----NGSNF 337 (499)
T ss_dssp SSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSS-BCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEE-----CSSCE
T ss_pred ccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCc-ccccccccccccccCCCcccCCCCcEEEEEEEEe-----cCcEE
Confidence 2 11 11122123333322111111100000000 00011000000 00000 00000 12268
Q ss_pred EEcCcCCCCCCC----------------CCCCceEEEecCcEEEEEEEe---cCccceeeEEEcCceeEEEEecCCcc--
Q 009960 142 LMNGKGPFGYQM----------------TREPESFTVTKGMTYRFRISN---VGSVFSFNFRIQNHKMVLVETEGSYT-- 200 (521)
Q Consensus 142 liNG~~~~~~~~----------------~~~~p~~~v~~G~~~rlRliN---a~~~~~~~~~i~gh~~~via~DG~~~-- 200 (521)
.|||+.+..... ....+.+.++.|++|+|.|.| .+. ..++||+|||.|+|++.+|...
T Consensus 338 ~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~-~~HP~HLHGh~F~Vl~~~g~~~~n 416 (499)
T 3pxl_A 338 FINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPG-APHPFHLHGHTFAVVRSAGSTVYN 416 (499)
T ss_dssp EETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCS-CSCEEEETTCCEEEEECTTCCCCC
T ss_pred EEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCC-CCccceecCCcEEEEeccCCcccc
Confidence 899988742100 012357899999999999994 333 3569999999999999888643
Q ss_pred --cceeeeeEEecC---CcEEEEEEEeCCCCcceEEEeccc
Q 009960 201 --NQITLRSLDVHV---GQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 201 --~p~~~d~v~l~p---GeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
.|...|++.|.+ |+.+.+.++++ .||.|.++++..
T Consensus 417 ~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~ 456 (499)
T 3pxl_A 417 YDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHID 456 (499)
T ss_dssp SSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSH
T ss_pred cCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCCh
Confidence 588999999986 99999999988 799999999854
No 62
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.8e-11 Score=130.61 Aligned_cols=230 Identities=10% Similarity=0.123 Sum_probs=142.2
Q ss_pred CCeEEEecCCEEEEEEEECC-CCCeeEEecCcCCCCCCCCCCCcc----c-CcccCCCCceEEEEEEcce-eeeEEEecC
Q 009960 4 GPLINSTTNDFVHVNVFNNL-DEPLLFTWNGIQQRLNSWQDGVSG----T-NCPILPRKNWTYVFQVKDQ-IGSFFYFPS 76 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~~~y~f~~~~~-~Gt~wYH~H 76 (521)
.|+|+|++|+++++|+.|.. .....+++.|..+.. ...||.+. + ...|.|||+++..+++.++ .|.||..+.
T Consensus 177 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~ 255 (534)
T 1zpu_A 177 NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQK 255 (534)
T ss_dssp SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEE
T ss_pred ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEe
Confidence 48999999999999999998 456789999987653 46899853 2 5569999999999997543 578999876
Q ss_pred chhhhc------CCceecEEEeCCCCCCCCCCCCCcceeEEeeeeccCCH------HHHHH--HhccCCCCCCCCCCeEE
Q 009960 77 INFQKA------GGGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWFYDDY------KKTRS--MANTSLTAYNAIPDVIL 142 (521)
Q Consensus 77 ~~~q~~------~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~------~~~~~--~~~~~~~~~~~~~~~~l 142 (521)
...... ....+..+++=......+.+....++...+.+...... ..... .+.............++
T Consensus 256 ~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 335 (534)
T 1zpu_A 256 FDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVMDNLKNGVNYAF 335 (534)
T ss_dssp ECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEEEECTTSCEEEE
T ss_pred ccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEeeccCCceeEEE
Confidence 542210 01122223321111110100000000000000000000 00000 00000000000123688
Q ss_pred EcCcCCCCCCC-------------------CCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCC-----
Q 009960 143 MNGKGPFGYQM-------------------TREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGS----- 198 (521)
Q Consensus 143 iNG~~~~~~~~-------------------~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~----- 198 (521)
|||+.+..... ......+.++.|++++|.|.|.+.. .++||||||.|+|++.++.
T Consensus 336 iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~-~HP~HLHGh~F~Vl~~~~~~~~~~ 414 (534)
T 1zpu_A 336 FNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG-THPFHLHGHAFQTIQRDRTYDDAL 414 (534)
T ss_dssp ETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEECCCCCGGG
T ss_pred ECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCC-CCCeEecCCceEEEeecCCccccc
Confidence 99997642100 0013468999999999999998765 4599999999999999853
Q ss_pred ------c---------ccceeeeeEEecCCcEEEEEEEeCCCCcceEEEeccc
Q 009960 199 ------Y---------TNQITLRSLDVHVGQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 199 ------~---------~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
+ ..|..+||+.|.||+.+.|.++++ .||.|.++++..
T Consensus 415 ~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~ 466 (534)
T 1zpu_A 415 GEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIE 466 (534)
T ss_dssp TCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCH
T ss_pred cCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCch
Confidence 1 246789999999999999999998 799999999864
No 63
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.39 E-value=2.8e-13 Score=120.15 Aligned_cols=86 Identities=21% Similarity=0.215 Sum_probs=65.1
Q ss_pred CCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCC------CCccc--CcccCCCC--ceEEEEEEcceeeeEE
Q 009960 3 PGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQD------GVSGT--NCPILPRK--NWTYVFQVKDQIGSFF 72 (521)
Q Consensus 3 PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~D------G~~~~--q~~i~pG~--~~~y~f~~~~~~Gt~w 72 (521)
|+|+|+|++||+|+++++|... ...|.+.+...+....+ ..++. ...|.||+ +++|+|++ ++|+||
T Consensus 59 ~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~--~pGtY~ 134 (154)
T 2cal_A 59 KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP--TAGTYY 134 (154)
T ss_dssp ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC--CSEEEE
T ss_pred CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE--CCceEE
Confidence 5699999999999999999732 34566665543333221 11111 13789999 99999994 799999
Q ss_pred EecCchhhhcCCceecEEEe
Q 009960 73 YFPSINFQKAGGGFGPIRVN 92 (521)
Q Consensus 73 YH~H~~~q~~~Gl~G~liV~ 92 (521)
||||...|..+||+|.|+|+
T Consensus 135 y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 135 YVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EECCSTTTGGGTCEEEEEEC
T ss_pred EECCCCCHHHCCCEEEEEEC
Confidence 99999889999999999985
No 64
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.33 E-value=7.6e-11 Score=126.48 Aligned_cols=230 Identities=8% Similarity=0.014 Sum_probs=140.1
Q ss_pred CCeEEEecCCEEEEEEEECCC-CCeeEEecCcCCCCCCCCCCCcc----c-CcccCCCCceEEEEEEcceeeeEEEecCc
Q 009960 4 GPLINSTTNDFVHVNVFNNLD-EPLLFTWNGIQQRLNSWQDGVSG----T-NCPILPRKNWTYVFQVKDQIGSFFYFPSI 77 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~ 77 (521)
-|+|+|++|+++++||.|... ....+|++|..+.. ...||.+. + ...|.|||+++..+++++.+|.||.....
T Consensus 214 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~ 292 (559)
T 2q9o_A 214 YANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTF 292 (559)
T ss_dssp CCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEEC
T ss_pred ceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEe
Confidence 368999999999999999984 46789999987653 46899863 2 55799999999999975557999998765
Q ss_pred --hhhh--cCCc--eecEEEeCCCCCCCCCCC----CC----cceeE-EeeeeccCCH---HHHHHHhccCCCCCCCCCC
Q 009960 78 --NFQK--AGGG--FGPIRVNNRIVISVPFPK----PE----AEFDL-LIGDWFYDDY---KKTRSMANTSLTAYNAIPD 139 (521)
Q Consensus 78 --~~q~--~~Gl--~G~liV~~~~~~~~~~~~----~~----~e~~l-~l~d~~~~~~---~~~~~~~~~~~~~~~~~~~ 139 (521)
.... .... .+.|....... ..|... .+ .+..+ -+........ ......+............
T Consensus 293 ~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 371 (559)
T 2q9o_A 293 GGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDLTGTPLF 371 (559)
T ss_dssp CGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCCCGGGEEEEEEECSSSSSC
T ss_pred ccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCcccccceeEEEEEEeecCCCceE
Confidence 2110 1111 22233322211 111100 00 00000 0000000000 0000000000000001124
Q ss_pred eEEEcCcCCCCCCCC--------------CCCceEEEecCcEEEEEEEecCc----cceeeEEEcCceeEEEEecC----
Q 009960 140 VILMNGKGPFGYQMT--------------REPESFTVTKGMTYRFRISNVGS----VFSFNFRIQNHKMVLVETEG---- 197 (521)
Q Consensus 140 ~~liNG~~~~~~~~~--------------~~~p~~~v~~G~~~rlRliNa~~----~~~~~~~i~gh~~~via~DG---- 197 (521)
.|+|||+.+...... .....+.++.++.+++.++|... ...++||||||.|+|++.++
T Consensus 372 ~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~ 451 (559)
T 2q9o_A 372 VWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPA 451 (559)
T ss_dssp EEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCT
T ss_pred EEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEeccccccc
Confidence 799999987321000 01134778877777776776643 45679999999999999987
Q ss_pred -----Cc------------ccceeeeeEEecCCcEEEEEEEeCCCCcceEEEeccc
Q 009960 198 -----SY------------TNQITLRSLDVHVGQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 198 -----~~------------~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
+. ..|..+||+.|.+|+++.|.++++ .||.|.++++..
T Consensus 452 ~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil 506 (559)
T 2q9o_A 452 ASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIA 506 (559)
T ss_dssp TSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCH
T ss_pred ccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecch
Confidence 32 146789999999999999999988 799999999864
No 65
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.31 E-value=5.9e-11 Score=123.88 Aligned_cols=200 Identities=11% Similarity=0.034 Sum_probs=133.4
Q ss_pred CCeEEEecCCEEEEEEEECC-CCCeeEEe--cC---cCCCCCCCCCCCcc-----c-CcccCCCCceEEEEEEcceeeeE
Q 009960 4 GPLINSTTNDFVHVNVFNNL-DEPLLFTW--NG---IQQRLNSWQDGVSG-----T-NCPILPRKNWTYVFQVKDQIGSF 71 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l-~~~~~iH~--HG---~~~~~~~~~DG~~~-----~-q~~i~pG~~~~y~f~~~~~~Gt~ 71 (521)
.|+|+|++| ++++|+.|.. .....+|+ +| ..+. ..+.||.+. + ...|.|||+++..++++ .+.|
T Consensus 179 ~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y 254 (448)
T 3aw5_A 179 DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMR-LIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVY 254 (448)
T ss_dssp TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEE-EEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEE
T ss_pred cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEE-EEEeCCCccCCceEeceEEECCcceEEEEEECC--CCce
Confidence 589999999 9999999998 45678999 87 5443 246899842 2 45699999999999974 4789
Q ss_pred EEecCchhhhcCC-------------ceecEE--EeCCCCCCCC--CC-------CCCcceeEEeeeeccCCHHHHHHHh
Q 009960 72 FYFPSINFQKAGG-------------GFGPIR--VNNRIVISVP--FP-------KPEAEFDLLIGDWFYDDYKKTRSMA 127 (521)
Q Consensus 72 wYH~H~~~q~~~G-------------l~G~li--V~~~~~~~~~--~~-------~~~~e~~l~l~d~~~~~~~~~~~~~ 127 (521)
|..++.......+ ....++ +.+....+.+ .. ....+..+.+.
T Consensus 255 ~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~-------------- 320 (448)
T 3aw5_A 255 LLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALS-------------- 320 (448)
T ss_dssp EEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEE--------------
T ss_pred EEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEe--------------
Confidence 9987743210000 111122 2121110000 00 00111111111
Q ss_pred ccCCCCCCCCCCeEEEcCcCCCCCCCCCCCceEE-EecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcc------
Q 009960 128 NTSLTAYNAIPDVILMNGKGPFGYQMTREPESFT-VTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYT------ 200 (521)
Q Consensus 128 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~p~~~-v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~------ 200 (521)
.+ ...|+|||+.+.. ..+.+. ++.|++++|+|.|.+....++||||||.|+|++.+|...
T Consensus 321 -~~-------~~~~~iNg~~~~~-----~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~ 387 (448)
T 3aw5_A 321 -LS-------GMQWTINGMFWNA-----SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELA 387 (448)
T ss_dssp -EE-------TTEEEETTBCCCT-----TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTC
T ss_pred -CC-------CceeeECCCcCCC-----CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCccccccc
Confidence 00 1258999998842 124467 899999999999998344569999999999999999764
Q ss_pred ------cc---eeeeeEEecCCcEEEEEEEeC----CCCcceEEEeccc
Q 009960 201 ------NQ---ITLRSLDVHVGQSYSVLVTAD----QNEADYYIVASPK 236 (521)
Q Consensus 201 ------~p---~~~d~v~l~pGeR~dv~v~~~----~~~g~~~i~~~~~ 236 (521)
.| ...||+.+.||+++.|.+++. +.| |.++++..
T Consensus 388 ~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil 434 (448)
T 3aw5_A 388 VDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNL 434 (448)
T ss_dssp CSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSH
T ss_pred ccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCCh
Confidence 23 578999999999999996664 234 88888754
No 66
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.31 E-value=4.1e-11 Score=125.56 Aligned_cols=222 Identities=16% Similarity=0.157 Sum_probs=138.6
Q ss_pred CCeEEEecCCEEEEEEEECC-CCCeeEEe-cCcCCCCCCCCCCCcc-----c-CcccCCCCceEEEEEEcceeeeEEEec
Q 009960 4 GPLINSTTNDFVHVNVFNNL-DEPLLFTW-NGIQQRLNSWQDGVSG-----T-NCPILPRKNWTYVFQVKDQIGSFFYFP 75 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l-~~~~~iH~-HG~~~~~~~~~DG~~~-----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~ 75 (521)
.|.+.+ +|+++++|+.|.. .....+++ +|..+. ....||.+. + ...|.|||+++..++++ +.++|+.-+
T Consensus 193 ~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~-vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~ 269 (488)
T 3od3_A 193 YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLY-VIASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVT 269 (488)
T ss_dssp SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEE
T ss_pred CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEE-EEEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEE
Confidence 366665 6789999999997 45678888 677544 256899632 2 55799999999999984 467777655
Q ss_pred CchhhhcCCce----e----cEEEeC-----CCCCCC---CC---CC----CCcceeEEeeee-ccCCHHHHHHHhc---
Q 009960 76 SINFQKAGGGF----G----PIRVNN-----RIVISV---PF---PK----PEAEFDLLIGDW-FYDDYKKTRSMAN--- 128 (521)
Q Consensus 76 H~~~q~~~Gl~----G----~liV~~-----~~~~~~---~~---~~----~~~e~~l~l~d~-~~~~~~~~~~~~~--- 128 (521)
..... .|+. . .+-|.+ ....+. +. +. ..+++.+.+... .......+.+...
T Consensus 270 ~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~ 347 (488)
T 3od3_A 270 LPVSQ--MGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQA 347 (488)
T ss_dssp CCCSS--TTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGG
T ss_pred eccCC--CCcccccccCccceeEecccccCCCCCCCcccccCCCCcccccccceEEEEEecccccccccccccccccccc
Confidence 42211 1110 1 122332 111110 00 11 123344443210 0000000100000
Q ss_pred -cCC----------CCCC---------CCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCc
Q 009960 129 -TSL----------TAYN---------AIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNH 188 (521)
Q Consensus 129 -~~~----------~~~~---------~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh 188 (521)
.+. .|.. .....|+|||+.+.. ..+.++++.|+++||+|+|.+....++||||||
T Consensus 348 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~-----~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~ 422 (488)
T 3od3_A 348 MAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDM-----NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT 422 (488)
T ss_dssp GTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCT-----TCCSEECCBSSCEEEEEECTTCCCCEEEEETTC
T ss_pred cccccccccccccccCccccccccccccccceeeECCeeCCC-----CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCc
Confidence 000 0000 011248999999741 235689999999999999998655679999999
Q ss_pred eeEEEEecCCcccc---eeeeeEEecCCcEEEEEEEeCC---CCcceEEEeccc
Q 009960 189 KMVLVETEGSYTNQ---ITLRSLDVHVGQSYSVLVTADQ---NEADYYIVASPK 236 (521)
Q Consensus 189 ~~~via~DG~~~~p---~~~d~v~l~pGeR~dv~v~~~~---~~g~~~i~~~~~ 236 (521)
.|+|++.||....+ ...|+|.|. |+++.|++++++ .+|.|.++++..
T Consensus 423 ~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 423 QFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp CBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSH
T ss_pred eEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCch
Confidence 99999999988743 468999999 999999999974 357999999864
No 67
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.23 E-value=2e-11 Score=122.94 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=77.8
Q ss_pred CCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCc-------c-c-CcccCCCCceEEEEEE--cceeeeE
Q 009960 3 PGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVS-------G-T-NCPILPRKNWTYVFQV--KDQIGSF 71 (521)
Q Consensus 3 PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~-------~-~-q~~i~pG~~~~y~f~~--~~~~Gt~ 71 (521)
..|+|++++||+|+|++.|.....+.+|+||..+... .+|.. . . ...|.||++++|.|++ ++.+|+|
T Consensus 207 ~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w 284 (343)
T 3cg8_A 207 TGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAW 284 (343)
T ss_dssp CCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred CCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeE
Confidence 4689999999999999999998999999999875432 34431 1 1 4569999999999995 3579999
Q ss_pred EEecCchhhhcCCceecEEEeCCCCCC
Q 009960 72 FYFPSINFQKAGGGFGPIRVNNRIVIS 98 (521)
Q Consensus 72 wYH~H~~~q~~~Gl~G~liV~~~~~~~ 98 (521)
+||||...+...||.|.++|.+++...
T Consensus 285 ~~HCHi~~H~~~GM~g~~~V~~~~~~~ 311 (343)
T 3cg8_A 285 MYHCHVQSHSDMGMVGLFLVKKPDGTI 311 (343)
T ss_dssp EEEECSHHHHHTTCEEEEEEECTTSCC
T ss_pred EEeCCCHHHHhccCcEEEEEecCCCCC
Confidence 999999999999999999999865433
No 68
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.23 E-value=2.1e-11 Score=101.06 Aligned_cols=75 Identities=15% Similarity=0.149 Sum_probs=61.0
Q ss_pred CCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEecCchhh
Q 009960 2 FPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYFPSINFQ 80 (521)
Q Consensus 2 ~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q 80 (521)
|-.++|+|++||+|++ +|..+.++++|+++. +||.... +..+.||++++|+| +++|+|||||+.+.
T Consensus 30 F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H~- 96 (105)
T 2ov0_A 30 YETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPHP- 96 (105)
T ss_dssp ESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT-
T ss_pred EcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC-
Confidence 5578999999999655 699888999999852 3565444 56689999999988 46999999998754
Q ss_pred hcCCceecEEEe
Q 009960 81 KAGGGFGPIRVN 92 (521)
Q Consensus 81 ~~~Gl~G~liV~ 92 (521)
||.|.|+|+
T Consensus 97 ---gM~G~i~V~ 105 (105)
T 2ov0_A 97 ---FMRGKVVVE 105 (105)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 899999985
No 69
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.22 E-value=4.5e-10 Score=120.82 Aligned_cols=222 Identities=10% Similarity=0.046 Sum_probs=137.9
Q ss_pred CCeEEEecCCEEEEEEEECC-CCCeeEEecCc-------CCCCCCCCCCCcc----c-C-------cccCCCCceEEEEE
Q 009960 4 GPLINSTTNDFVHVNVFNNL-DEPLLFTWNGI-------QQRLNSWQDGVSG----T-N-------CPILPRKNWTYVFQ 63 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG~-------~~~~~~~~DG~~~----~-q-------~~i~pG~~~~y~f~ 63 (521)
.|.|.|++| ++++||.|.. .....+++.|. .+. ....||.+. . + ..|.|||+++..++
T Consensus 264 ~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd 341 (612)
T 2g23_A 264 WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVD 341 (612)
T ss_dssp SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEE
T ss_pred CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEE
Confidence 489999999 9999999997 56778888765 222 246899853 1 3 35899999999999
Q ss_pred Ecceee-eEEEecCchhhh------cC----CceecEEEeCCC-CCC--CCC------CCCC-----cceeEEee-----
Q 009960 64 VKDQIG-SFFYFPSINFQK------AG----GGFGPIRVNNRI-VIS--VPF------PKPE-----AEFDLLIG----- 113 (521)
Q Consensus 64 ~~~~~G-t~wYH~H~~~q~------~~----Gl~G~liV~~~~-~~~--~~~------~~~~-----~e~~l~l~----- 113 (521)
+.+.+| +++...-..... .+ +..--|.|..+. .+. .|. .... ....+++.
T Consensus 342 ~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r~~~~~~~~~~ 421 (612)
T 2g23_A 342 FRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLIVLTPPGTK 421 (612)
T ss_dssp CTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEEEECCTTCT
T ss_pred CCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccceeEEeecccccc
Confidence 765556 466665431110 00 111124554432 111 111 0000 00112221
Q ss_pred -------eeccCC---HHHHHHHhc-cCC---CCCCCCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccc
Q 009960 114 -------DWFYDD---YKKTRSMAN-TSL---TAYNAIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVF 179 (521)
Q Consensus 114 -------d~~~~~---~~~~~~~~~-~~~---~~~~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~ 179 (521)
-|.... .+.+ .+. .+. .........++|||+.+. +.+.++++.|++++|+|+|.+..
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~iNG~~~~------~~~~~~v~~G~~v~w~l~N~~~~- 492 (612)
T 2g23_A 422 GSGGHPEIWEMAEVEDPADV--QVPAEGVIQVTGADGRTKTYRRTAATFN------DGLGFTIGEGTHEQWTFLNLSPI- 492 (612)
T ss_dssp TSTTCCCEEEEEEEC-------CCSCTTEEEEECTTSCEEEEEEEECSTT------SCCCEEEETTCEEEEEEEECSSS-
T ss_pred ccccccceeecccccccccc--ccccccceeeeccCCceeEEEECCccCC------CCCceEecCCCEEEEEEEeCCCC-
Confidence 011000 0000 000 000 000011235889999884 34789999999999999999865
Q ss_pred eeeEEEcCceeEEEEecCC------------------------cc---cceeeeeEEecCCcEEEEEEEeCCCCcceEEE
Q 009960 180 SFNFRIQNHKMVLVETEGS------------------------YT---NQITLRSLDVHVGQSYSVLVTADQNEADYYIV 232 (521)
Q Consensus 180 ~~~~~i~gh~~~via~DG~------------------------~~---~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~ 232 (521)
.++||||||.|+|++.+|. .+ ++...|++.|.||+++.|.++++..+|.|.++
T Consensus 493 ~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~H 572 (612)
T 2g23_A 493 LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYH 572 (612)
T ss_dssp CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEE
T ss_pred CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEE
Confidence 5599999999999997542 11 22368999999999999999999779999999
Q ss_pred eccc
Q 009960 233 ASPK 236 (521)
Q Consensus 233 ~~~~ 236 (521)
++..
T Consensus 573 CHil 576 (612)
T 2g23_A 573 CHLL 576 (612)
T ss_dssp ESSH
T ss_pred eCch
Confidence 9864
No 70
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.20 E-value=3e-11 Score=101.38 Aligned_cols=78 Identities=19% Similarity=0.124 Sum_probs=61.5
Q ss_pred CCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCchhhh
Q 009960 2 FPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQK 81 (521)
Q Consensus 2 ~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~ 81 (521)
|++|.|++++||+|+++++|.... +||+.... .| ++..+.||++++|.|++ +++|+||||||.....
T Consensus 35 f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~---~~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~ 101 (112)
T 1iby_A 35 NEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FG---VQEVIKAGETKTISFTA-DKAGAFTIWCQLHPKN 101 (112)
T ss_dssp EESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GT---EEEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTT
T ss_pred EcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CC---ceeEeCCCCEEEEEEEC-CCCEEEEEECCCCCch
Confidence 678999999999999999999765 45543321 12 24679999999999995 7899999999976543
Q ss_pred cCCceecEEEeC
Q 009960 82 AGGGFGPIRVNN 93 (521)
Q Consensus 82 ~~Gl~G~liV~~ 93 (521)
.. |.|.|+|.+
T Consensus 102 ~~-M~g~i~V~~ 112 (112)
T 1iby_A 102 IH-LPGTLNVVE 112 (112)
T ss_dssp TB-CCEEEEEEC
T ss_pred HH-CEEEEEEeC
Confidence 33 999999974
No 71
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.18 E-value=2.7e-11 Score=105.80 Aligned_cols=94 Identities=13% Similarity=0.055 Sum_probs=72.3
Q ss_pred EEecCCCcEEEEEEEcCCCC-ccceeecCcceEEEe-------ecc--ccCCCCCCCCCCCCCCCcceEEEeCCCCEEEE
Q 009960 374 VVTGNHKGWIELVFNNNLDV-IDSWHLDGFGFHVVG-------FGI--GEWAPESRSTYNLFDPVVRSTVQVYPGGWTAV 443 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~-~HP~HlHG~~F~Vl~-------~g~--g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~i 443 (521)
.++++.|++|+|+|.|.+.+ .|.||+|+..+.+.. ... ..|.+.. ....++||..|.||+...|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCCEEEE
Confidence 36789999999999999988 899999986532110 000 0121110 1234789999999999999
Q ss_pred EEEecCCeeeEEeecchhhhhccceEEEEEe
Q 009960 444 YAFLDNPGMWNLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 444 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 474 (521)
.|.+++||.|.||||+..|+. ||+..+.|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999999999 999999873
No 72
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.18 E-value=3e-10 Score=120.66 Aligned_cols=207 Identities=12% Similarity=0.049 Sum_probs=132.1
Q ss_pred CCeEEEecCCEEEEEEEECCC-CCeeEEecCc-CCCCCCCCCCCcc-----c-CcccCCCCceEEEEEEcceeeeEEE-e
Q 009960 4 GPLINSTTNDFVHVNVFNNLD-EPLLFTWNGI-QQRLNSWQDGVSG-----T-NCPILPRKNWTYVFQVKDQIGSFFY-F 74 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~-~~~~~~~~DG~~~-----~-q~~i~pG~~~~y~f~~~~~~Gt~wY-H 74 (521)
.|.|.|+.| ++++|+.|... ....+|+.|. .+. ..+.||.+. + ...|.|||+++..+++++.+|.++. .
T Consensus 240 ~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~ 317 (513)
T 2wsd_A 240 WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFI-QIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILA 317 (513)
T ss_dssp SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEE
T ss_pred cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEE-EEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEE
Confidence 478999885 99999999984 4678999887 444 356899642 2 4569999999999997554676332 2
Q ss_pred cCch--hhhcCCc-eecEEEeCCC--CCC--CCCCCC------------CcceeEEeeeeccCCHHHHHHHhccCCCCCC
Q 009960 75 PSIN--FQKAGGG-FGPIRVNNRI--VIS--VPFPKP------------EAEFDLLIGDWFYDDYKKTRSMANTSLTAYN 135 (521)
Q Consensus 75 ~H~~--~q~~~Gl-~G~liV~~~~--~~~--~~~~~~------------~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~ 135 (521)
+-.. .....+. ...+-++... ..+ ...+.. ..+..+.+... .+..
T Consensus 318 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~-------------~~~~--- 381 (513)
T 2wsd_A 318 NSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT-------------QDEY--- 381 (513)
T ss_dssp ECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE-------------ECTT---
T ss_pred ecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee-------------cCCC---
Confidence 1110 0000011 1222232211 000 000000 00111111100 0000
Q ss_pred CCCCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCC---------------c-
Q 009960 136 AIPDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGS---------------Y- 199 (521)
Q Consensus 136 ~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~---------------~- 199 (521)
....++|||+.+.. ...+.++.|++++|+|+|.+.. .++||||||.|+|++.+|. .
T Consensus 382 -g~~~~~iNg~~~~~------~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
T 2wsd_A 382 -GRPVLLLNNKRWHD------PVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPA 453 (513)
T ss_dssp -SCEEEEETTBCTTS------CCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCC
T ss_pred -CCceEeECCccCCC------cccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcccccccccccccccCCC
Confidence 11257899998742 2456889999999999998765 5599999999999998762 1
Q ss_pred -----ccceeeeeEEecCCcEEEEEEEeCCCCcceEEEeccc
Q 009960 200 -----TNQITLRSLDVHVGQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 200 -----~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
-++...|++.|.||+++.|++++++.+|.|.++++..
T Consensus 454 ~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 454 VPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp BCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred CCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 0234789999999999999999965799999999864
No 73
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.17 E-value=7.9e-11 Score=97.44 Aligned_cols=85 Identities=16% Similarity=0.015 Sum_probs=66.4
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEe-cCCee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFL-DNPGM 452 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~a-dnpG~ 452 (521)
.+.++.|++|+| .|.+...|+||+||..|... + +. +. +....++..+.||+...++|.+ +.||.
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~--~-g~-~~---------~~~~~~~~~i~pG~~~~~~f~~~~~~G~ 84 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA--S-KE-LA---------DKLSHSQLMFSPGESYEITFSSDFPAGT 84 (105)
T ss_dssp EEEECTTEEEEE--EECSSCCEEEEECTTSSGGG--C-HH-HH---------HHHCEEEEECSTTCEEEEEECTTSCSEE
T ss_pred EEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc--c-cc-cc---------ccccccccccCCCCeEEEEEecCCCCee
Confidence 467899999876 58888899999999876431 0 00 00 0012588999999999999998 79999
Q ss_pred eEEeecchhhhhccceEEEEEeC
Q 009960 453 WNLRSQLLQNWFLGQELYIRVHN 475 (521)
Q Consensus 453 w~~HCHil~H~d~GMm~~~~V~~ 475 (521)
|.|||| .|...||+..+.|.+
T Consensus 85 y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 85 YTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp EEEECT--TTGGGTCEEEEEECC
T ss_pred EEEEeC--CchhcCCEEEEEEcC
Confidence 999999 599999999998853
No 74
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.17 E-value=7e-11 Score=125.81 Aligned_cols=220 Identities=11% Similarity=-0.011 Sum_probs=132.3
Q ss_pred CCeEEEecCCEEEEEEEECC-CCCeeEEecC-------cCCCCCCCCCCCc----c-c-CcccCCCCceEEEEEEcceee
Q 009960 4 GPLINSTTNDFVHVNVFNNL-DEPLLFTWNG-------IQQRLNSWQDGVS----G-T-NCPILPRKNWTYVFQVKDQIG 69 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l-~~~~~iH~HG-------~~~~~~~~~DG~~----~-~-q~~i~pG~~~~y~f~~~~~~G 69 (521)
.|.|.|+.| ++++||.|.. .....+++.| ..+. ....||.+ . + ...|.|||+++..+++.+.+|
T Consensus 211 ~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g 288 (534)
T 3abg_A 211 WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAG 288 (534)
T ss_dssp SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTT
T ss_pred CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCC
Confidence 578899885 9999999998 4567899976 3332 24689863 2 2 567999999999999755467
Q ss_pred -eEEEecCchhhhcC-------CceecEEEeCCCCCCCCCCCCCcceeEEeeeec-cCCHHHHHHHhccCCCCCCCCCCe
Q 009960 70 -SFFYFPSINFQKAG-------GGFGPIRVNNRIVISVPFPKPEAEFDLLIGDWF-YDDYKKTRSMANTSLTAYNAIPDV 140 (521)
Q Consensus 70 -t~wYH~H~~~q~~~-------Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~ 140 (521)
+||........... ...+.+-+........+. ....+..+.... ..........+..+. ....
T Consensus 289 ~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~~~~~~~~~~~~~~-----~~~~ 360 (534)
T 3abg_A 289 KTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPSPTTNTPRQFRFGR-----TGPT 360 (534)
T ss_dssp SEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCCCCCCCCEEEECSC-----CCST
T ss_pred ceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCCCccccceEEEEec-----cCce
Confidence 68876532100000 011222222211100000 000000000000 000000000000000 1125
Q ss_pred EEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEe-cCC---cc---cceeeeeEEecCC
Q 009960 141 ILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVET-EGS---YT---NQITLRSLDVHVG 213 (521)
Q Consensus 141 ~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~-DG~---~~---~p~~~d~v~l~pG 213 (521)
|+|||+.+... .....++++.|++++|.|.|.+....++||||||.|+|++. +|. .. +....||+.|.||
T Consensus 361 w~iNG~~f~~~---~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg 437 (534)
T 3abg_A 361 WTINGVAFADV---QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRR 437 (534)
T ss_dssp TCCCCBTTBCT---TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSS
T ss_pred eEECCcccCCC---CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCC
Confidence 78999987421 11124579999999999999886556799999999999998 664 11 1256899999999
Q ss_pred cEEEEEEEeCCCCcceEEEeccc
Q 009960 214 QSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 214 eR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
+++.|.+.+.+.+|.|.++++..
T Consensus 438 ~~v~I~~~~adnpG~w~~HCHil 460 (534)
T 3abg_A 438 ETVVVEAHYAPFPGVYMFHCHNL 460 (534)
T ss_dssp EEEEEEEECCSCCEEEEEEESCH
T ss_pred CEEEEEEEECCCCccEEEecChH
Confidence 99999998444899999999864
No 75
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.12 E-value=1.7e-09 Score=115.61 Aligned_cols=225 Identities=8% Similarity=-0.025 Sum_probs=138.8
Q ss_pred CCeEEEecCCEEEEEEEECCC-CCeeEEecCcCCCCCCCCCCCcc----c-CcccCCCCceEEEEEEcceeeeEEEecCc
Q 009960 4 GPLINSTTNDFVHVNVFNNLD-EPLLFTWNGIQQRLNSWQDGVSG----T-NCPILPRKNWTYVFQVKDQIGSFFYFPSI 77 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~ 77 (521)
-++|+|++|+++++|+.|... ....++++|..+.. .+.||++. + ...|.|||+++..+++++.+|.||-....
T Consensus 252 ~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~ 330 (580)
T 3sqr_A 252 KFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNW 330 (580)
T ss_dssp CCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCC
T ss_pred ceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEec
Confidence 479999999999999999984 56699999987653 46899863 2 45699999999999986668999999775
Q ss_pred hhhh---cC-CceecEEEeCCCCCCCCCCCCCccee-EEeee--eccCCH--HHHHH------HhccCCCCCCCCCCeEE
Q 009960 78 NFQK---AG-GGFGPIRVNNRIVISVPFPKPEAEFD-LLIGD--WFYDDY--KKTRS------MANTSLTAYNAIPDVIL 142 (521)
Q Consensus 78 ~~q~---~~-Gl~G~liV~~~~~~~~~~~~~~~e~~-l~l~d--~~~~~~--~~~~~------~~~~~~~~~~~~~~~~l 142 (521)
.... .. +..-+++.........|... ..+.. ..+.+ ..+... ..... .+.-+ ......|.
T Consensus 331 ~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~-~~~~~~~~~~~~~~~L~P~~~~~~~~~~~~~~~l~~~----~~~~~~w~ 405 (580)
T 3sqr_A 331 GTTCSTNNEAANATGILRYDSSSIANPTSV-GTTPRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSA----FTNYFTWT 405 (580)
T ss_dssp CTTTSCBTTGGGCEEEEESSTTCCCCCCCC-CCCCCCCSCCSCGGGCCBSSCCBCCSEEEEEEEEEEE----ESSSEEEE
T ss_pred ccccCccCCCCceEEEEEECCCCCCCCCCC-CCCccchhhcccccccccCCCCCCCCccceEEEEEec----cCCceeEE
Confidence 3210 11 11112232221111111100 00000 00000 000000 00000 00000 00122578
Q ss_pred EcCcCCCCC----------CCCC----CCceEEEe----cCcEEEEEEEecC--ccceeeEEEcCceeEEEEecCC----
Q 009960 143 MNGKGPFGY----------QMTR----EPESFTVT----KGMTYRFRISNVG--SVFSFNFRIQNHKMVLVETEGS---- 198 (521)
Q Consensus 143 iNG~~~~~~----------~~~~----~~p~~~v~----~G~~~rlRliNa~--~~~~~~~~i~gh~~~via~DG~---- 198 (521)
|||..+... .... ....+.+. .|++|.|.|.|.+ . ..++||||||.|+|++.+.+
T Consensus 406 iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~-~~HP~HLHGh~F~vv~~g~G~f~~ 484 (580)
T 3sqr_A 406 INSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG-IWHPIHLHGHDFFIVAQETDVFNS 484 (580)
T ss_dssp ETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC-CCEEEEESSCCEEEEEEESSCCCT
T ss_pred ECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc-cceeeEecCceEEEEecCCCccCc
Confidence 999876311 0000 01134443 5999999999987 4 36699999999999998533
Q ss_pred --------cccceeeeeEEecCCcEEEEEEEeCCCCcceEEEeccc
Q 009960 199 --------YTNQITLRSLDVHVGQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 199 --------~~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
+..|..+|++.+.+|+.+.+.++++ .||.|.++++..
T Consensus 485 ~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~ 529 (580)
T 3sqr_A 485 DESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIA 529 (580)
T ss_dssp TTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSH
T ss_pred cccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcH
Confidence 2357889999999999999999998 799999999854
No 76
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.11 E-value=1.3e-10 Score=96.30 Aligned_cols=82 Identities=15% Similarity=0.223 Sum_probs=62.6
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCc----cc-CcccCCCCceEEEEEEcceeeeEEEecCchh
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVS----GT-NCPILPRKNWTYVFQVKDQIGSFFYFPSINF 79 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~----~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~ 79 (521)
+.|+|++||+|++ +|....++++|+|+.... ..+|.. .. ...+.||++++|+|++++++|+|||||| .
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~--~ 92 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE--P 92 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--T
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--C
Confidence 7899999999755 588777899999886431 123320 01 2458999999999974368999999999 6
Q ss_pred hhcCCceecEEEeC
Q 009960 80 QKAGGGFGPIRVNN 93 (521)
Q Consensus 80 q~~~Gl~G~liV~~ 93 (521)
+...||.|.|+|++
T Consensus 93 H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 93 HRGAGMVGKITVAG 106 (106)
T ss_dssp TGGGTCEEEEEECC
T ss_pred hhhcCcEEEEEEcC
Confidence 77789999999963
No 77
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.04 E-value=3e-10 Score=120.51 Aligned_cols=84 Identities=19% Similarity=0.120 Sum_probs=63.0
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCch-h
Q 009960 1 MFPGPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSIN-F 79 (521)
Q Consensus 1 ~~PGP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~-~ 79 (521)
+||+|+|+|++||+|+++++|.+..... +||+.+.. .| +...+.||++++|+|++ +++|+||||||.. .
T Consensus 509 ~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~g---v~~~i~PG~t~t~~Fta-~~pGtY~yhC~e~Cg 578 (595)
T 1fwx_A 509 SFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YG---VAMEIGPQMTSSVTFVA-ANPGVYWYYCQWFCH 578 (595)
T ss_dssp EESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TT---EEEEECTTCEEEEEEEC-CSCEEEEEECCSCCS
T ss_pred cccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CC---cceeeCCCCeEEEEEEC-CCCEEEEEECCCCCC
Confidence 4799999999999999999998643111 35554321 22 23679999999999995 7899999999931 1
Q ss_pred hhcCCceecEEEeCC
Q 009960 80 QKAGGGFGPIRVNNR 94 (521)
Q Consensus 80 q~~~Gl~G~liV~~~ 94 (521)
..-.||+|.|+|+++
T Consensus 579 ~~H~gM~G~IiV~p~ 593 (595)
T 1fwx_A 579 ALHMEMRGRMLVEPK 593 (595)
T ss_dssp TTCTTCEEEEEEECC
T ss_pred CCccCCEEEEEEEcC
Confidence 111399999999975
No 78
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.98 E-value=1.7e-09 Score=94.24 Aligned_cols=86 Identities=10% Similarity=0.013 Sum_probs=65.5
Q ss_pred CCeEEEecCCEEEEEEEECCCC-CeeEEecCcCC-----------------CCCCCCCCCccc--CcccCCCCceEEEEE
Q 009960 4 GPLINSTTNDFVHVNVFNNLDE-PLLFTWNGIQQ-----------------RLNSWQDGVSGT--NCPILPRKNWTYVFQ 63 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l~~-~~~iH~HG~~~-----------------~~~~~~DG~~~~--q~~i~pG~~~~y~f~ 63 (521)
-+.|+|++||+|+++|+|.... .++++.++... ...+..+ .... ...|.||+++++.|+
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~-~~~~~~t~~l~pGet~~v~f~ 112 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADK-SNIIAESPLANGNETVEVTFT 112 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCC-TTEEEECCCBCTTCEEEEEEE
T ss_pred CCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCccc-ccccccccccCCCCEEEEEEE
Confidence 4789999999999999999777 88998887421 0000001 1111 234899999999999
Q ss_pred EcceeeeEEEecCchhhhcCCceecEEEe
Q 009960 64 VKDQIGSFFYFPSINFQKAGGGFGPIRVN 92 (521)
Q Consensus 64 ~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 92 (521)
+ +++|+|+||||...+.. ||.|.|+|+
T Consensus 113 ~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 113 A-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp C-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred C-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 5 57999999999888888 999999984
No 79
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.92 E-value=2e-08 Score=109.21 Aligned_cols=92 Identities=10% Similarity=0.076 Sum_probs=75.2
Q ss_pred CCeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcc-----------------
Q 009960 138 PDVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYT----------------- 200 (521)
Q Consensus 138 ~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~----------------- 200 (521)
...+.+||+.+. ....+.++.|++++|.|+|.+... ++||||||.|+|++.+|...
T Consensus 458 ~~~~~~n~~~~~------~~~~~~~~~g~~~~w~i~N~~~~~-HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~ 530 (612)
T 3gyr_A 458 TKTYRRTARTFN------DGLGFTIGEGTHEQWTFLNLSPIL-HPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLD 530 (612)
T ss_dssp EEEEEEEECSTT------SCCCEEEETTCEEEEEEEECSSSC-EEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEE
T ss_pred cccccccCccCC------CCcceEeCCCCEEEEEEEcCCCCC-cCEeECCCcEEEEeecCCcCccccccccccccccccc
Confidence 346788888774 235688999999999999998765 49999999999999876421
Q ss_pred ----------cceeeeeEEecCCcEEEEEEEeCCCCcceEEEeccc
Q 009960 201 ----------NQITLRSLDVHVGQSYSVLVTADQNEADYYIVASPK 236 (521)
Q Consensus 201 ----------~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~~~~ 236 (521)
++...|||.|.+|+.+.|.+++.+.+|.|.++++..
T Consensus 531 ~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 531 PDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred cccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 123479999999999999999766899999999865
No 80
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.86 E-value=3.5e-09 Score=87.59 Aligned_cols=84 Identities=14% Similarity=0.026 Sum_probs=63.0
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEe-cCCee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFL-DNPGM 452 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~a-dnpG~ 452 (521)
.++++.|++|+|+ |.+...|.||+|+..+.. . .|. +. ....+|++.+.||+...+.|.+ +.||.
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~-~~---------~~~~~~~~~~~pG~~~~~~f~~~~~~G~ 85 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD-LA---------KSLSHKQLLMSPGQSTSTTFPADAPAGE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH-HH---------HHHCBCSCCCSTTCEEEEECCTTCCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc-cc---------hhccccceeeCCCCEEEEEEecCCCCce
Confidence 4678999998885 777789999999764411 0 000 00 0001467788999999999888 89999
Q ss_pred eEEeecchhhhhccceEEEEEe
Q 009960 453 WNLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 453 w~~HCHil~H~d~GMm~~~~V~ 474 (521)
|.|||| .|...||+..+.|.
T Consensus 86 y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 86 YTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--ChhhcCcEEEEEEc
Confidence 999999 69999999999885
No 81
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.83 E-value=3.8e-09 Score=86.06 Aligned_cols=79 Identities=16% Similarity=0.205 Sum_probs=58.7
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCC--cccCcccCCCCceEEEEEEcceeeeEEEecCchhhhc
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGV--SGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKA 82 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~--~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~ 82 (521)
+.|++++||+|+ ++|....++++|+++.... ...|.- +.....+.||++++++|. ++|+|+|||+ .+..
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p--~~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~~ 88 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP--SGVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQG 88 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSC--TTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCC--CccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--Cccc
Confidence 689999999876 5898778999999986321 111110 000245899999999885 6999999999 4667
Q ss_pred CCceecEEEe
Q 009960 83 GGGFGPIRVN 92 (521)
Q Consensus 83 ~Gl~G~liV~ 92 (521)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 2plt_A 89 AGMVGKIIVQ 98 (98)
T ss_dssp GTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 7999999984
No 82
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.82 E-value=7.3e-09 Score=84.73 Aligned_cols=73 Identities=14% Similarity=0.107 Sum_probs=60.6
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCchhhhcCC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAGG 84 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 84 (521)
..|++++||+|++.++|.....+++...+... ...+.||++.+|.|+ ++++|+|.|+|.. +...|
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t-~~~~G~Y~y~C~~--H~~~g 92 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVK-PKSAGTYELICRY--HLLKG 92 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEEC-CCSCEEEEEECTT--TGGGT
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEe-cccCceEEEECcc--ccCCC
Confidence 57999999999999999987777777765422 234789999999999 4789999999974 55679
Q ss_pred ceecEEEe
Q 009960 85 GFGPIRVN 92 (521)
Q Consensus 85 l~G~liV~ 92 (521)
|.|.|+|+
T Consensus 93 M~G~i~Ve 100 (100)
T 4hci_A 93 MEGKVIVK 100 (100)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999996
No 83
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.80 E-value=2.3e-08 Score=87.09 Aligned_cols=89 Identities=13% Similarity=0.137 Sum_probs=65.9
Q ss_pred CCeEEEecCCEEEEEEEE--CCCCCeeEEecCcC------------C----CCCCCCCCCccc--CcccCCCCceEEEEE
Q 009960 4 GPLINSTTNDFVHVNVFN--NLDEPLLFTWNGIQ------------Q----RLNSWQDGVSGT--NCPILPRKNWTYVFQ 63 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N--~l~~~~~iH~HG~~------------~----~~~~~~DG~~~~--q~~i~pG~~~~y~f~ 63 (521)
.+.|+|++||+|+++++| .....++++.+... . ...+..|..... ...|.||++.++.|+
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEE
Confidence 478999999999999999 66778888887321 0 000000111111 245899999999999
Q ss_pred EcceeeeEEEecCchhhhcCCceecEEEeC
Q 009960 64 VKDQIGSFFYFPSINFQKAGGGFGPIRVNN 93 (521)
Q Consensus 64 ~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 93 (521)
+ +.+|+|||||+...+...||.|.|+|.+
T Consensus 112 ~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 112 T-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp C-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred e-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 6 6799999999998888899999999974
No 84
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.79 E-value=4.3e-09 Score=85.74 Aligned_cols=80 Identities=15% Similarity=0.204 Sum_probs=57.4
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCchhhhcCC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAGG 84 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 84 (521)
+.|+|++||+|++ .|....++++++++....+ ...++.......+.||++++++| +++|+|+|||+ .+...|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg-~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPA-DTAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCH-HHHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCc-cccccccccccccCCCCEEEEEc---CCCeEEEEEcC--CccccC
Confidence 6899999998765 5877778999988753210 00000000024589999999988 36999999999 567789
Q ss_pred ceecEEEe
Q 009960 85 GFGPIRVN 92 (521)
Q Consensus 85 l~G~liV~ 92 (521)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 85
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.73 E-value=2.6e-08 Score=86.80 Aligned_cols=96 Identities=17% Similarity=0.154 Sum_probs=70.9
Q ss_pred EEecCCCcEEEEEEEc--CCCCccceeecCc--ceEEEe-ec-----cccCCCCCCCCCCCCCCCcceEEEeCCCCEEEE
Q 009960 374 VVTGNHKGWIELVFNN--NLDVIDSWHLDGF--GFHVVG-FG-----IGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAV 443 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N--~~~~~HP~HlHG~--~F~Vl~-~g-----~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~i 443 (521)
.++++.|++|+|++.| .+.+.|.|+++.. .|.-+. .+ ...|-+.. + ....+++|..|.+|....+
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP----D-TPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT----T-CTTEEEECCCBCTTEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCcc----c-cccccccceeeCCCceeEE
Confidence 3678999999999999 6689999999853 221100 00 00011000 0 0124689999999999999
Q ss_pred EEEecCCeeeEEeecchhhhhccceEEEEEe
Q 009960 444 YAFLDNPGMWNLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 444 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 474 (521)
.|.++.||.|.|||++..|...||...+.|.
T Consensus 109 ~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 109 TFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999885
No 86
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.72 E-value=2.5e-08 Score=79.82 Aligned_cols=74 Identities=20% Similarity=0.295 Sum_probs=55.8
Q ss_pred CCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCchhhhcC
Q 009960 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAG 83 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 83 (521)
.+.|++++||+|++ .|.....++++.++.. +.. .....+.||+++++.| +++|+|||||+ .+...
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS----HKDLAFSPGETFEATF---SEPGTYTYYCE--PHRGA 82 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC----EEEEECSTTCEEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC----cccceeCCCCEEEEEe---CCCEEEEEEeC--CCccC
Confidence 36899999999865 5877778999988731 000 0124588999999887 46999999999 45556
Q ss_pred CceecEEEe
Q 009960 84 GGFGPIRVN 92 (521)
Q Consensus 84 Gl~G~liV~ 92 (521)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 87
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.68 E-value=2.9e-08 Score=80.74 Aligned_cols=78 Identities=15% Similarity=0.040 Sum_probs=60.2
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCc-ceEEEeCCCCEEEEEEEecCCee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVV-RSTVQVYPGGWTAVYAFLDNPGM 452 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~-rDTv~vp~~g~v~irf~adnpG~ 452 (521)
.+.++.|++|+|+ |.+...|.+|+++..+- +.. .+.+ .|++.+.||+...++| +.||.
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~~---------------~~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--ADT---------------AAKLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HHH---------------HHHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--ccc---------------cccccccccccCCCCEEEEEc--CCCeE
Confidence 4678999998885 77778899999875321 000 0012 5789999999988866 89999
Q ss_pred eEEeecchhhhhccceEEEEEe
Q 009960 453 WNLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 453 w~~HCHil~H~d~GMm~~~~V~ 474 (521)
|.|||+ .|...||...+.|+
T Consensus 79 y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 79 YTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEcC--CccccCCeEEEEEC
Confidence 999999 59999999999873
No 88
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.68 E-value=4.8e-08 Score=79.26 Aligned_cols=76 Identities=14% Similarity=0.294 Sum_probs=56.8
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcc--c-CcccCCCCceEEEEEEcceeeeEEEecCchhhh
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSG--T-NCPILPRKNWTYVFQVKDQIGSFFYFPSINFQK 81 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~--~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~ 81 (521)
+.|+|++||+| ++.|....+++++.++... .+|..+ . ...+.||++++++| +++|+|+|||+ .+.
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Chh
Confidence 58999999986 5568766788888876532 122111 1 24588999999988 46999999999 566
Q ss_pred cCCceecEEEe
Q 009960 82 AGGGFGPIRVN 92 (521)
Q Consensus 82 ~~Gl~G~liV~ 92 (521)
..||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 77999999984
No 89
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.65 E-value=5.4e-08 Score=79.74 Aligned_cols=76 Identities=9% Similarity=0.085 Sum_probs=55.6
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCC-------Cccc---CcccCCCCceEEEEEEcceeeeEEEe
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDG-------VSGT---NCPILPRKNWTYVFQVKDQIGSFFYF 74 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG-------~~~~---q~~i~pG~~~~y~f~~~~~~Gt~wYH 74 (521)
+.|+|++||+|+ ++|....+++++++.-. . .++ .++. ...+.||++++++| +++|+|+||
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~ 86 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPA---G--APGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFY 86 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCT---T--CCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEE
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCcc---c--ccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEE
Confidence 689999999976 55887677888876310 0 110 0111 23479999999988 469999999
Q ss_pred cCchhhhcCCceecEEEe
Q 009960 75 PSINFQKAGGGFGPIRVN 92 (521)
Q Consensus 75 ~H~~~q~~~Gl~G~liV~ 92 (521)
|+ .+...||.|.|+|+
T Consensus 87 C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 87 CT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CS--TTGGGTCEEEEEEC
T ss_pred eC--CCcccCCeEEEEEC
Confidence 99 67778999999984
No 90
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.63 E-value=1e-07 Score=77.44 Aligned_cols=80 Identities=16% Similarity=0.077 Sum_probs=60.7
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|++|+| .|.+...|.+|+|+..+- ..++. ...++|+..+.||+...++| +.||.|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p------~~~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGFPHNIVFDEDAIP------SGVNA---------DAISRDDYLNAPGETYSVKL--TAAGEY 79 (98)
T ss_dssp EEEECTTCEEEE--EECSSCCEEEEECGGGSC------TTCCH---------HHHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceEEEEeCCCCC------Ccccc---------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 467899999887 688888999999975320 00000 00246889999999988865 589999
Q ss_pred EEeecchhhhhccceEEEEEe
Q 009960 454 NLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~ 474 (521)
.|||+ .|...||...+.|.
T Consensus 80 ~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 80 GYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp EEECG--GGGGGTCEEEEEEC
T ss_pred EEEcC--CccccCCeEEEEEC
Confidence 99999 59999999999873
No 91
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.62 E-value=1.4e-07 Score=76.71 Aligned_cols=76 Identities=14% Similarity=0.239 Sum_probs=57.3
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcc------c-CcccCCCCceEEEEEEcceeeeEEEecCc
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSG------T-NCPILPRKNWTYVFQVKDQIGSFFYFPSI 77 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~ 77 (521)
+.|+|++||+| +++|....++++++++... .+|... . ...+.||++++++|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG-
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC-
Confidence 57999999986 4589877788988887432 122210 1 235789999998884 6999999999
Q ss_pred hhhhcCCceecEEEe
Q 009960 78 NFQKAGGGFGPIRVN 92 (521)
Q Consensus 78 ~~q~~~Gl~G~liV~ 92 (521)
.+...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 56778999999984
No 92
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.62 E-value=1.5e-07 Score=76.66 Aligned_cols=76 Identities=14% Similarity=0.218 Sum_probs=56.7
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCc----c--c-CcccCCCCceEEEEEEcceeeeEEEecCc
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVS----G--T-NCPILPRKNWTYVFQVKDQIGSFFYFPSI 77 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~----~--~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~ 77 (521)
+.|+|++||+|+ ++|....+++++.++... -+|.. + . ...+.||++++++|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~- 85 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS- 85 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC-
Confidence 689999999875 588877788888876422 12211 0 0 135789999999884 6999999999
Q ss_pred hhhhcCCceecEEEe
Q 009960 78 NFQKAGGGFGPIRVN 92 (521)
Q Consensus 78 ~~q~~~Gl~G~liV~ 92 (521)
.+...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 -PHQGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CCcccCCEEEEEEC
Confidence 56778999999984
No 93
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.61 E-value=9.7e-08 Score=80.77 Aligned_cols=74 Identities=11% Similarity=0.081 Sum_probs=53.0
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCchhhhcCC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAGG 84 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 84 (521)
..|+|++||+|++.++|. ++++..+.- ..-+|.- ...+.||++++|+|. .+|+|||+|- .+...|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~~--~f~~~pg~t~s~TF~---~pG~y~y~C~--~H~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGVE--SFKSKINESYTLTVT---EPGLYGVKCT--PHFGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeC--CCCcCC
Confidence 689999999988877762 344443321 1112321 233579999999983 6999999999 567789
Q ss_pred ceecEEEeC
Q 009960 85 GFGPIRVNN 93 (521)
Q Consensus 85 l~G~liV~~ 93 (521)
|.|.|+|.+
T Consensus 86 M~G~I~V~~ 94 (123)
T 3erx_A 86 MVGLVQVGD 94 (123)
T ss_dssp CEEEEEESS
T ss_pred cEEEEEECC
Confidence 999999986
No 94
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.59 E-value=1.5e-07 Score=75.21 Aligned_cols=72 Identities=17% Similarity=0.136 Sum_probs=57.9
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|+.|.|+ |.+...|.+|+++. .+ ...++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~~H~v~~~~~---------~~--------------~~~~~~~~~~g~~~~~~f--~~~G~y 72 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLAPHNVVVEGQ---------PE--------------LSHKDLAFSPGETFEATF--SEPGTY 72 (91)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEETTC---------GG--------------GCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCC---------Cc--------------cCcccceeCCCCEEEEEe--CCCEEE
Confidence 4678999998874 77778899999872 11 125788899999887766 899999
Q ss_pred EEeecchhhhhccceEEEEEe
Q 009960 454 NLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~ 474 (521)
.|||+ .|...||...+.|+
T Consensus 73 ~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 73 TYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEEeC--CCccCCCEEEEEEC
Confidence 99999 59999999998873
No 95
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.57 E-value=8.8e-08 Score=81.47 Aligned_cols=76 Identities=14% Similarity=0.083 Sum_probs=53.0
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCchhhhcCC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAGG 84 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 84 (521)
+.|+|++||+|++.+.|. ++++..+.- ..-+|.- ..-+.||++++|+|. .+|+|||||-. +...|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~-----~~P~g~~--~f~s~pGet~s~TF~---~pG~y~y~C~~--H~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKG-----GAPEGAE--TWKGKINEEITVTLS---KPGVYMYQCAP--HVGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTT-----CSCTTCC--CCBCCTTCCCEEECC---SCEEEEEECTT--TGGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccC-----cCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeCC--CCcCC
Confidence 689999999977766653 444443311 0112211 234579999999983 69999999984 56789
Q ss_pred ceecEEEeCCC
Q 009960 85 GFGPIRVNNRI 95 (521)
Q Consensus 85 l~G~liV~~~~ 95 (521)
|.|.|+|.+++
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999743
No 96
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.53 E-value=4.1e-07 Score=75.84 Aligned_cols=74 Identities=14% Similarity=0.181 Sum_probs=58.4
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|+.|+|++.|.+...|-|++... .-+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 46789999999999999876555554421 125679999999999999999999
Q ss_pred EEeecchhhhhccceEEEEEeC
Q 009960 454 NLRSQLLQNWFLGQELYIRVHN 475 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~~ 475 (521)
.||||+..|... |...+.|.+
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEEC
T ss_pred EEECCCCCchHH-CEEEEEEeC
Confidence 999999665444 888888853
No 97
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.51 E-value=2.1e-07 Score=78.57 Aligned_cols=75 Identities=11% Similarity=-0.044 Sum_probs=53.5
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCchhhhcCC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAGG 84 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 84 (521)
..|+|++||+|++. |.. .++++..+.... -+|.. ...+.||++|+|+|. .+|+|||||- .+...|
T Consensus 22 ~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~~-----p~g~~--~~~~~pg~t~s~TF~---~~G~y~Y~C~--~H~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKFV--PTD-KSHNAESVREVW-----PEGVA--PVKGGFSKEVVFNAE---KEGLYVLKCA--PHYGMG 86 (124)
T ss_dssp SEEEECTTCEEEEE--CSS-SSCCCEECTTTS-----CTTSC--CCBCCTTCCEEEECC---SSEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEEEE--ECC-CCccEEEeCCcC-----CCCcc--ccccCCCCEEEEEeC---CCeEEEEEcC--CCCcCC
Confidence 68999999997654 543 566666653211 12221 234679999999984 5999999996 566789
Q ss_pred ceecEEEeCC
Q 009960 85 GFGPIRVNNR 94 (521)
Q Consensus 85 l~G~liV~~~ 94 (521)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
No 98
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.50 E-value=7.7e-08 Score=78.03 Aligned_cols=78 Identities=15% Similarity=0.126 Sum_probs=58.6
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|++|+|+ |.+...|.+++++..+. .+.. ...+++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~---~~~~--------------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG---ESAP--------------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT---SCHH--------------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc---cccc--------------cccccceecCCCCEEEEEe--CCCeEE
Confidence 3678999998775 77778899999876540 0000 0014677788898888866 899999
Q ss_pred EEeecchhhhhccceEEEEEe
Q 009960 454 NLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~ 474 (521)
.|||+ .|...||...+.|.
T Consensus 79 ~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp EEECS--STTTTTCEEEEEEC
T ss_pred EEEcc--ChhhcCCEEEEEEC
Confidence 99999 59999999998873
No 99
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.48 E-value=4.2e-07 Score=78.08 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=54.2
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEecCchhhhcC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAG 83 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 83 (521)
+.|++++||+|++ +|....++++++... .+|.... ...+.||++++|+| +++|+|+|+|-.+.
T Consensus 60 ~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H~---- 123 (132)
T 3c75_A 60 PEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP---- 123 (132)
T ss_dssp SEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT----
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCCCc----
Confidence 6899999999865 588777777776532 1222222 34689999999988 36999999998743
Q ss_pred CceecEEEe
Q 009960 84 GGFGPIRVN 92 (521)
Q Consensus 84 Gl~G~liV~ 92 (521)
||.|.|+|+
T Consensus 124 gM~G~I~V~ 132 (132)
T 3c75_A 124 FMRGKVIVE 132 (132)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999985
No 100
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.41 E-value=4.4e-07 Score=73.72 Aligned_cols=76 Identities=13% Similarity=0.097 Sum_probs=54.9
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCc-c-c---CcccCCCCceEEEEEEcceeeeEEEecCchh
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVS-G-T---NCPILPRKNWTYVFQVKDQIGSFFYFPSINF 79 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~-~-~---q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~ 79 (521)
+.|+|++||+|++ .|.....+++....-.. -+|.- + . ...+.||++++++| +++|+|+|+|-.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~-- 85 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP-- 85 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT--
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchh--
Confidence 6899999999655 58866788887764211 12221 0 0 13589999999988 469999999986
Q ss_pred hhcCCceecEEEe
Q 009960 80 QKAGGGFGPIRVN 92 (521)
Q Consensus 80 q~~~Gl~G~liV~ 92 (521)
+...||.|.|+|+
T Consensus 86 H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 HAGAGMKMTITVQ 98 (98)
T ss_dssp TGGGTCEEEEEEC
T ss_pred hccCCCEEEEEEC
Confidence 5556999999984
No 101
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.41 E-value=1.2e-06 Score=71.41 Aligned_cols=72 Identities=18% Similarity=0.203 Sum_probs=59.9
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|+.|+|++.|.+...|-|.+.+..+ ...+.||....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceE
Confidence 3678999999999999988888877654322 2356788999999999999999
Q ss_pred EEeecchhhhhccceEEEEEe
Q 009960 454 NLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~ 474 (521)
.|+|.. |...||...+.|+
T Consensus 82 ~y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EEECTT--TGGGTCEEEEEEC
T ss_pred EEECcc--ccCCCCEEEEEEC
Confidence 999985 9999999998874
No 102
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.39 E-value=8.7e-07 Score=71.99 Aligned_cols=82 Identities=13% Similarity=0.045 Sum_probs=59.4
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|++|+| .|.+...|.+|+++..|- .+ ++. ... ...+|++.+.+|+...++| +.||.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~-----~~~--~~~~~~~~~~~G~~~~~~f--~~~G~y 80 (99)
T 1byp_A 18 DLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDV-----TKI--SMPEEDLLNAPGEEYSVTL--TEKGTY 80 (99)
T ss_dssp EEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HHH--SCCTTCCBCSTTCEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccc-----ccc--cccccceeeCCCCEEEEEe--CCCcEE
Confidence 467899999877 688888999999975440 00 000 000 0125667788999888866 699999
Q ss_pred EEeecchhhhhccceEEEEEe
Q 009960 454 NLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~ 474 (521)
.|||+ .|...||...+.|.
T Consensus 81 ~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 81 KFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EEECG--GGTTTTCEEEEEEC
T ss_pred EEEcC--CccccCCEEEEEEC
Confidence 99999 59999999999873
No 103
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.30 E-value=2.8e-06 Score=72.35 Aligned_cols=88 Identities=14% Similarity=0.054 Sum_probs=59.3
Q ss_pred CeEEEecC-CEEEEEEEECCCCC-----eeEEe--cCcCC-------CCCCCCC----CCccc---CcccCCCCceEEEE
Q 009960 5 PLINSTTN-DFVHVNVFNNLDEP-----LLFTW--NGIQQ-------RLNSWQD----GVSGT---NCPILPRKNWTYVF 62 (521)
Q Consensus 5 P~i~v~~G-d~v~v~~~N~l~~~-----~~iH~--HG~~~-------~~~~~~D----G~~~~---q~~i~pG~~~~y~f 62 (521)
..|.|++| |+|+|+|+|....+ +++-+ +|... .....++ +-+.+ ...|.||+++++.|
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKF 97 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEE
Confidence 58999999 99999999987543 44332 22100 0000011 11111 23589999999999
Q ss_pred EEc--ceeeeEEEecCchhhhcCCceecEEEeC
Q 009960 63 QVK--DQIGSFFYFPSINFQKAGGGFGPIRVNN 93 (521)
Q Consensus 63 ~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 93 (521)
+++ .++|+|||.|-...+.. ||.|.|+|.+
T Consensus 98 ~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 98 KVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred eccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 964 27999999998766666 8999999963
No 104
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.30 E-value=1.7e-06 Score=73.15 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=50.2
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCchhhhcCC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAGG 84 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 84 (521)
+.|+|++||+|++ .|... ++++..+- ...-+|.. .....||++++|+|. .+|+|||+|.. +...|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESIK-----DMIPEGAE--KFKSKINENYVLTVT---QPGAYLVKCTP--HYAMG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEECT-----TCSCTTCC--CCBCCTTCCEEEECC---SCEEEEEECTT--TGGGT
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEec-----ccCCCCcc--ceecCCCCEEEEEeC---CCEEEEEEeCC--cccCC
Confidence 6899999999755 55432 44444321 01112221 123468999888883 59999999974 66679
Q ss_pred ceecEEEeCC
Q 009960 85 GFGPIRVNNR 94 (521)
Q Consensus 85 l~G~liV~~~ 94 (521)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999873
No 105
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.26 E-value=1.9e-06 Score=72.84 Aligned_cols=75 Identities=11% Similarity=0.038 Sum_probs=50.7
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCchhhhcCC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAGG 84 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 84 (521)
+.|+|++||+|+ ++|... ++++..+. ...-||.. ...+.||++++|+|. .+|+|+|+|.. +...|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGAD--YVKTTVGQEAVVKFD---KEGVYGFKCAP--HYMMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCC--CCBCCTTSCEEEECC---SCEEEEEECST--TTTTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeCC--ccccC
Confidence 689999999965 455532 44444331 11112211 123579999988884 59999999974 66689
Q ss_pred ceecEEEeCC
Q 009960 85 GFGPIRVNNR 94 (521)
Q Consensus 85 l~G~liV~~~ 94 (521)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 106
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.26 E-value=3.2e-06 Score=69.59 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=51.7
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEEcceeeeEEEecCchhhhcC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAG 83 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 83 (521)
+.|+|++||+|++ .|.....+++...... .|.... ...+.||++++++| +++|+|+|+|-.+.
T Consensus 34 ~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~---- 97 (106)
T 1id2_A 34 PEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP---- 97 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT----
T ss_pred CEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC----
Confidence 6899999999865 4886666666554321 111112 23578999999888 36999999998743
Q ss_pred CceecEEEe
Q 009960 84 GGFGPIRVN 92 (521)
Q Consensus 84 Gl~G~liV~ 92 (521)
||.|.|+|+
T Consensus 98 ~M~G~I~V~ 106 (106)
T 1id2_A 98 FMRGKVIVE 106 (106)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 899999984
No 107
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.25 E-value=1.2e-06 Score=71.66 Aligned_cols=84 Identities=11% Similarity=-0.048 Sum_probs=57.9
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCc-ceEEEeCCCCEEEEEEEecCCee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVV-RSTVQVYPGGWTAVYAFLDNPGM 452 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~-rDTv~vp~~g~v~irf~adnpG~ 452 (521)
.++++.|++|+|+ |.+...|.++++.-... .+.+.... ..+.+ .+++.+.||+...+.| +.||.
T Consensus 18 ~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~~pG~~~~~tf--~~~G~ 82 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL------KAASMDENDLLSEDEPSFKAKV--STPGT 82 (102)
T ss_dssp EEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH------HHTSCCTTCCBBTTBCEEEECC--CSCEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh------hcccccccceecCCCCEEEEEe--CCCeE
Confidence 4688999998874 77778899998831100 00000000 00112 3667788999888866 89999
Q ss_pred eEEeecchhhhhccceEEEEEe
Q 009960 453 WNLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 453 w~~HCHil~H~d~GMm~~~~V~ 474 (521)
|.|||+ .|...||...+.|+
T Consensus 83 y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 83 YTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEeC--CCcccCCeEEEEEC
Confidence 999999 69999999999873
No 108
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.14 E-value=4.8e-06 Score=73.88 Aligned_cols=88 Identities=8% Similarity=-0.081 Sum_probs=58.9
Q ss_pred CeEEE-ecCCEEEEEEEECCCCC-----eeEEe--cCcC---------C---CCCCCCCCCccc-CcccCCCCceEEEEE
Q 009960 5 PLINS-TTNDFVHVNVFNNLDEP-----LLFTW--NGIQ---------Q---RLNSWQDGVSGT-NCPILPRKNWTYVFQ 63 (521)
Q Consensus 5 P~i~v-~~Gd~v~v~~~N~l~~~-----~~iH~--HG~~---------~---~~~~~~DG~~~~-q~~i~pG~~~~y~f~ 63 (521)
..|.| ++||+|+|+|+|....+ +++-+ +|.. . ..-+..|..-.. ...|.||+++++.|+
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf~ 137 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLD 137 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEEC
T ss_pred ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEEe
Confidence 57999 99999999999997553 33322 2210 0 000001111001 235899999999998
Q ss_pred Ec-ceeeeEEEecCchhhhcCCceecEEEeC
Q 009960 64 VK-DQIGSFFYFPSINFQKAGGGFGPIRVNN 93 (521)
Q Consensus 64 ~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 93 (521)
++ -++|+|||+|-...+.. ||.|.|+|.+
T Consensus 138 ~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 138 PAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp GGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred cCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 64 26999999998766666 8999999973
No 109
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.05 E-value=9e-06 Score=65.90 Aligned_cols=82 Identities=13% Similarity=0.033 Sum_probs=58.1
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|++|+| .|.+...|.++++...+- .+...+. . ...++.+.+.||+...+.| +.||.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p---~~~~~~~------~----~~~~~~~~~~~G~~~~~tf--~~~G~y 80 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNAGFPHNIVFDEDSIP---SGVDASK------I----SMSEEDLLNAKGETFEVAL--SNKGEY 80 (99)
T ss_dssp EEEECTTCEEEE--EECSSCCBCCEECTTSSC---TTCCHHH------H----CCCTTCCBCSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceEEEEeCCCCc---ccccccc------c----ccccCccccCCCCEEEEEE--CCCceE
Confidence 467899999877 788878999999875330 0000000 0 0113556788999887765 699999
Q ss_pred EEeecchhhhhccceEEEEEe
Q 009960 454 NLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~ 474 (521)
.|||+ .|...||...+.|.
T Consensus 81 ~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 81 SFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp EEECG--GGTTTTCEEEEEEC
T ss_pred EEEcC--CCcccCCEEEEEEC
Confidence 99999 59999999998873
No 110
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.05 E-value=1.8e-05 Score=67.33 Aligned_cols=87 Identities=14% Similarity=-0.004 Sum_probs=57.4
Q ss_pred CeEEE-ecCCEEEEEEEECCCCC-----eeEEe--cCcC-------------CCCCCCCCCCccc-CcccCCCCceEEEE
Q 009960 5 PLINS-TTNDFVHVNVFNNLDEP-----LLFTW--NGIQ-------------QRLNSWQDGVSGT-NCPILPRKNWTYVF 62 (521)
Q Consensus 5 P~i~v-~~Gd~v~v~~~N~l~~~-----~~iH~--HG~~-------------~~~~~~~DG~~~~-q~~i~pG~~~~y~f 62 (521)
..|.| ++||+|+|+|+|....+ +++-+ +|.. ..-.+..|..-.. ...|.||++++..|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTF 97 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEE
Confidence 57999 99999999999997553 44332 2200 0000011111001 23589999999999
Q ss_pred EEc-ceeee-EEEecCchhhhcCCceecEEEe
Q 009960 63 QVK-DQIGS-FFYFPSINFQKAGGGFGPIRVN 92 (521)
Q Consensus 63 ~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 92 (521)
+++ -++|+ |||.|-...+.. ||.|.|+|.
T Consensus 98 ~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 98 DVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 963 04655 999998766666 899999986
No 111
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.99 E-value=1.3e-05 Score=67.55 Aligned_cols=73 Identities=12% Similarity=0.012 Sum_probs=49.1
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCchhhhcCC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSINFQKAGG 84 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 84 (521)
+.|+|++||+|++ .|... .++++...- ..-+|.. ...+.||++++|+|. ++|+|||+|-.+..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~~-----~~p~~~~--~~~~~~g~t~~~tF~---~~G~y~y~C~~H~~---- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIKG-----MIPDGAE--AFKSKINENYKVTFT---APGVYGVKCTPHPF---- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTT-----CSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEEETTEEE----
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEccc-----ccCCCcc--eeecCCCCEEEEEeC---CCEEEEEEeCCCcc----
Confidence 6899999998655 56533 444444321 0112211 134578999999883 69999999987433
Q ss_pred ceecEEEeCC
Q 009960 85 GFGPIRVNNR 94 (521)
Q Consensus 85 l~G~liV~~~ 94 (521)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999873
No 112
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.99 E-value=3e-05 Score=65.78 Aligned_cols=87 Identities=11% Similarity=-0.008 Sum_probs=57.8
Q ss_pred CeEEE-ecCCEEEEEEEECCCCC-----eeEEe--cCcC-------CCCCCCCCC----Ccc-c--CcccCCCCceEEEE
Q 009960 5 PLINS-TTNDFVHVNVFNNLDEP-----LLFTW--NGIQ-------QRLNSWQDG----VSG-T--NCPILPRKNWTYVF 62 (521)
Q Consensus 5 P~i~v-~~Gd~v~v~~~N~l~~~-----~~iH~--HG~~-------~~~~~~~DG----~~~-~--q~~i~pG~~~~y~f 62 (521)
..|.| ++||+|+|+|+|....+ +++-+ .|.. +.....++= -+. . ...|.||+++++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEE
Confidence 57999 99999999999997553 54443 2110 000001110 111 1 23489999999999
Q ss_pred EEcc-eeee-EEEecCchhhhcCCceecEEEe
Q 009960 63 QVKD-QIGS-FFYFPSINFQKAGGGFGPIRVN 92 (521)
Q Consensus 63 ~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 92 (521)
+++. .+|+ |||.|-...+.. ||.|.|+|.
T Consensus 98 ~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 98 DVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 9631 5776 999998777777 899999984
No 113
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.97 E-value=2.7e-05 Score=66.10 Aligned_cols=87 Identities=15% Similarity=0.025 Sum_probs=58.1
Q ss_pred CeEEE-ecCCEEEEEEEECCCCC-----eeEEecC-----------cC----CCCCCCCCCCccc-CcccCCCCceEEEE
Q 009960 5 PLINS-TTNDFVHVNVFNNLDEP-----LLFTWNG-----------IQ----QRLNSWQDGVSGT-NCPILPRKNWTYVF 62 (521)
Q Consensus 5 P~i~v-~~Gd~v~v~~~N~l~~~-----~~iH~HG-----------~~----~~~~~~~DG~~~~-q~~i~pG~~~~y~f 62 (521)
..|.| ++|++|+|+|+|....+ +++-+=. +. ....+..|..-.. ...|.||+++++.|
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vtf 96 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVTF 96 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEEE
Confidence 57999 99999999999997654 5543321 00 0000011111001 23579999999999
Q ss_pred EEc-ceeee-EEEecCchhhhcCCceecEEEe
Q 009960 63 QVK-DQIGS-FFYFPSINFQKAGGGFGPIRVN 92 (521)
Q Consensus 63 ~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 92 (521)
+++ -++|+ |+|.|-...+.. ||.|.|+|.
T Consensus 97 ~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 97 DVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp ESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred eccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 963 15885 999998776766 899999986
No 114
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.94 E-value=2.2e-05 Score=64.44 Aligned_cols=71 Identities=8% Similarity=-0.054 Sum_probs=50.8
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|+.|+| .|.+...|-+|++... .|. +.+ +.-.+.+|+...+.| +.||.|
T Consensus 34 ~i~v~~Gd~V~~--~N~d~~~H~v~~~~~~-------~g~-------------~~~-~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTW--INREAMPHNVHFVAGV-------LGE-------------AAL-KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCCEEEEEcCCC-------CCc-------------ccc-cccccCCCCEEEEEe--CCCEEE
Confidence 367899999888 4888788999988521 010 001 222367888776665 899999
Q ss_pred EEeecchhhhhccceEEEEE
Q 009960 454 NLRSQLLQNWFLGQELYIRV 473 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V 473 (521)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 55 89888877
No 115
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.89 E-value=4.8e-05 Score=66.95 Aligned_cols=83 Identities=18% Similarity=0.121 Sum_probs=59.8
Q ss_pred eEEecCCCcEEEEEEEcCC-CCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEE-------EeCCCC--EEE
Q 009960 373 SVVTGNHKGWIELVFNNNL-DVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTV-------QVYPGG--WTA 442 (521)
Q Consensus 373 ~~~~~~~g~~v~~vi~N~~-~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv-------~vp~~g--~v~ 442 (521)
+.++++.|+.|.+++.|.+ ...|-|-++.. +. .+.. . |...+.+ .|.||+ ...
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~-------~~-~~~~-----~----~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKK-------GP-PYAV-----M----PVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESC-------CS-CCCS-----S----CCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeec-------Cc-chhc-----c----ccccccccccccccccCCCCceEEE
Confidence 3578999999999999974 55565555421 11 1110 0 0011221 567899 999
Q ss_pred EEEEecCCeeeEEeecchhhhhccceEEEEE
Q 009960 443 VYAFLDNPGMWNLRSQLLQNWFLGQELYIRV 473 (521)
Q Consensus 443 irf~adnpG~w~~HCHil~H~d~GMm~~~~V 473 (521)
++|.+ .||.|.||||+-.|...||-..+.|
T Consensus 124 ~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 124 FTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99999 9999999999999999999999877
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.88 E-value=4e-05 Score=81.35 Aligned_cols=74 Identities=15% Similarity=0.182 Sum_probs=60.4
Q ss_pred EEecCCCcEEEEEEEcCC---CCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCC
Q 009960 374 VVTGNHKGWIELVFNNNL---DVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNP 450 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnp 450 (521)
.+.++.|+.|+|++.|.+ +..|.|+++++.+ + ..+.||....++|+++.|
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv-------------------------~--~~i~PG~t~t~~Fta~~p 566 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGV-------------------------A--MEIGPQMTSSVTFVAANP 566 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE-------------------------E--EEECTTCEEEEEEECCSC
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecCCCc-------------------------c--eeeCCCCeEEEEEECCCC
Confidence 467899999999999965 3479998886432 1 468889999999999999
Q ss_pred eeeEEeecc---hhhhhccceEEEEEeCC
Q 009960 451 GMWNLRSQL---LQNWFLGQELYIRVHNS 476 (521)
Q Consensus 451 G~w~~HCHi---l~H~d~GMm~~~~V~~~ 476 (521)
|.|.||||. ..|. ||...+.|+++
T Consensus 567 GtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp EEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred EEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 999999993 3454 99999999764
No 117
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.81 E-value=4.3e-05 Score=79.59 Aligned_cols=78 Identities=19% Similarity=0.123 Sum_probs=58.4
Q ss_pred CCCeEEEecCCEEEEEEEECC---CCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCch-
Q 009960 3 PGPLINSTTNDFVHVNVFNNL---DEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSIN- 78 (521)
Q Consensus 3 PGP~i~v~~Gd~v~v~~~N~l---~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~- 78 (521)
-.+.|+|++||+|++.++|.. +..+++...++. +..-+.||++.++.|++ +++|+|||+|..-
T Consensus 556 sP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslG------------IK~DaiPGrtnsvtFta-dkPGvY~y~CSE~C 622 (638)
T 3sbq_A 556 GVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHG------------VSMEISPQQTSSITFVA-DKPGLHWYYCSWFC 622 (638)
T ss_dssp SCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT------------EEEEECTTCEEEEEEEC-CSCEEEEEECCSCC
T ss_pred cCCEEEEecCceeEEEEecCCcCCCceeeeEecCCC------------ceeeeCCCCeEEEEEEc-CCCEEEEEECCCcC
Confidence 346899999999999999974 344444443321 22357899999999995 7899999999942
Q ss_pred hhhcCCceecEEEeC
Q 009960 79 FQKAGGGFGPIRVNN 93 (521)
Q Consensus 79 ~q~~~Gl~G~liV~~ 93 (521)
...-.+|.|.|+|++
T Consensus 623 Ga~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 623 HALHMEMVGRMMVEP 637 (638)
T ss_dssp STTCTTCEEEEEEEC
T ss_pred CCCcccceEEEEEec
Confidence 222357999999996
No 118
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.58 E-value=0.00017 Score=61.12 Aligned_cols=101 Identities=13% Similarity=-0.003 Sum_probs=61.0
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.++++.|++|+|++.|. .|-+..+.. .+ ++.. ..+.+.||+...+.| +.||.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~-----------~~f~s~pGet~s~TF--~~pG~y 76 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGA-----------ETWKGKINEEITVTL--SKPGVY 76 (127)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTC-----------CCCBCCTTCCCEEEC--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 46789999999976653 444443311 01 1100 111224677655555 899999
Q ss_pred EEeecchhhhhccceEEEEEeCCCCCCCCCCCCCCChhcccccccCccchHHHHHHHHHHH
Q 009960 454 NLRSQLLQNWFLGQELYIRVHNSDPNPAKERPPPENLLLCGQCKFLHLKLEFLMVLIELLA 514 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~~~~~~~~~~~~ 514 (521)
.|||-. |...||-..+.|.++. .+ ..-...+-+..-.+.|-.+++.+.
T Consensus 77 ~y~C~~--H~~~GM~G~I~V~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~~~~ 124 (127)
T 3tu6_A 77 MYQCAP--HVGMGMIGAIVVGEPA----------NL-EAVKGIKYPGKSKAAAEKIFAEIE 124 (127)
T ss_dssp EEECTT--TGGGTCEEEEEESSCT----------TH-HHHHTSCCCTTHHHHHHHHHHHHH
T ss_pred EEEeCC--CCcCCcEEEEEECcCC----------Cc-hhhhhcccchHHHHHHHHHHHHHh
Confidence 999994 9999999999997642 22 222223445555566666665553
No 119
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.55 E-value=0.00017 Score=60.79 Aligned_cols=99 Identities=15% Similarity=0.160 Sum_probs=61.3
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.++++.|++|+|++.|. .|-+..+.. .+ ++.. +.+.+.|++...++| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIKE----------IL-PEGV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECTT----------SS-CTTC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcCC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 46789999999987763 354444311 01 1100 111235677666666 899999
Q ss_pred EEeecchhhhhccceEEEEEeCCCCCCCCCCCCCCChhcccccccCccchHHHHHHHH
Q 009960 454 NLRSQLLQNWFLGQELYIRVHNSDPNPAKERPPPENLLLCGQCKFLHLKLEFLMVLIE 511 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~~~~~~~~~ 511 (521)
.|+|- .|...||-..+.|.++ |.++..-...+-+..-.+.|-.+++
T Consensus 75 ~y~C~--~H~~~GM~G~I~V~~~----------~~n~~~~~~~~~~~~~~~~~~~~~~ 120 (123)
T 3erx_A 75 GVKCT--PHFGMGMVGLVQVGDA----------PENLDAAKTAKMPKKARERMDAELA 120 (123)
T ss_dssp EEECG--GGTTTTCEEEEEESSS----------CTTHHHHHHCCCCHHHHHHHHHHHT
T ss_pred EEEeC--CCCcCCcEEEEEECCC----------CCCHHHHhhcccchHHHHHHHHHHH
Confidence 99999 4999999999999753 3344433334555555555554443
No 120
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.45 E-value=0.00057 Score=57.16 Aligned_cols=83 Identities=14% Similarity=0.139 Sum_probs=54.1
Q ss_pred CCeEEEec-CCEEEEEEEECCCCC-----eeEEe-----------cCcCCCCCCCCCCC----ccc---CcccCCCCceE
Q 009960 4 GPLINSTT-NDFVHVNVFNNLDEP-----LLFTW-----------NGIQQRLNSWQDGV----SGT---NCPILPRKNWT 59 (521)
Q Consensus 4 GP~i~v~~-Gd~v~v~~~N~l~~~-----~~iH~-----------HG~~~~~~~~~DG~----~~~---q~~i~pG~~~~ 59 (521)
-..|.|++ |++|+|+|+|....+ +++=+ -|+.. .+.+|=+ +-+ ..-|.||++++
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~--~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMAS--GLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHH--CGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhc--ChhhccCCCCCccceeccceeCCCcEEE
Confidence 46799976 999999999998543 32211 12210 0011111 111 33489999999
Q ss_pred EEEEEcc--eeeeEEEecCchhhhcCCceecEEEe
Q 009960 60 YVFQVKD--QIGSFFYFPSINFQKAGGGFGPIRVN 92 (521)
Q Consensus 60 y~f~~~~--~~Gt~wYH~H~~~q~~~Gl~G~liV~ 92 (521)
..|+.+. ++|+|.|-|- .+. ||.|.++|.
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999752 7999999999 555 899999883
No 121
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.36 E-value=0.00028 Score=59.37 Aligned_cols=74 Identities=12% Similarity=0.100 Sum_probs=50.0
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.++++.|++|+|+.. + ..|-+..+.. .+.. . .+.+.+.+|....+.| +.||.|
T Consensus 23 ~i~V~~GDTV~f~n~--~-~~Hnv~~~~~----------~~p~-g-----------~~~~~~~pg~t~s~TF--~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPT--D-KSHNAESVRE----------VWPE-G-----------VAPVKGGFSKEVVFNA--EKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEECS--S-SSCCCEECTT----------TSCT-T-----------SCCCBCCTTCCEEEEC--CSSEEE
T ss_pred EEEECCCCEEEEEEC--C-CCccEEEeCC----------cCCC-C-----------ccccccCCCCEEEEEe--CCCeEE
Confidence 467899999998644 3 5666665421 1110 0 1122345677666655 899999
Q ss_pred EEeecchhhhhccceEEEEEeCC
Q 009960 454 NLRSQLLQNWFLGQELYIRVHNS 476 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~~~ 476 (521)
.|||- .|...||...+.|.++
T Consensus 76 ~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 76 VLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp EEECT--TTGGGTCEEEEEESSC
T ss_pred EEEcC--CCCcCCCEEEEEECCC
Confidence 99997 5999999999999754
No 122
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.24 E-value=0.0011 Score=53.15 Aligned_cols=80 Identities=16% Similarity=0.125 Sum_probs=55.0
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|+.|+|+ |.+...|-+.+.... +. + .++. ...-.+...+.+|+...+.| +.||.|
T Consensus 19 ~i~v~~GdtV~~~--n~~~~~H~v~~~~~~----------~p-~---g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~y 79 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNAGFPHNIVFDEDA----------VP-A---GVDA-DAISYDDYLNSKGETVVRKL--STPGVY 79 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECTTS----------SC-T---TCCH-HHHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEeCCC----------Cc-c---cccc-ccccccccccCCCCEEEEEc--CCCEEE
Confidence 4678999998884 777678877665311 10 0 0000 00113456788999888766 899999
Q ss_pred EEeecchhhhhccceEEEEEe
Q 009960 454 NLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~ 474 (521)
.|+|-+ |...||-..+.|.
T Consensus 80 ~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 80 GVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EEECTT--TGGGTCEEEEEEC
T ss_pred EEEchh--hccCCCEEEEEEC
Confidence 999987 9888999988773
No 123
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.20 E-value=0.001 Score=54.39 Aligned_cols=71 Identities=11% Similarity=-0.126 Sum_probs=49.6
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|+.|+|+ |.+...|-+.+....- +.. ..++-.+.+|+...+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~~-----~~~----------------~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-----GED----------------AFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-----SSS----------------CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCCC-----Ccc----------------cccccccCCCCEEEEEe--CCCEEE
Confidence 3678999998885 7777778776653210 000 01333467888777766 899999
Q ss_pred EEeecchhhhhccceEEEEE
Q 009960 454 NLRSQLLQNWFLGQELYIRV 473 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V 473 (521)
.|+|-+ |. ||-..+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999987 65 99988877
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.02 E-value=0.0017 Score=55.27 Aligned_cols=72 Identities=13% Similarity=-0.083 Sum_probs=50.7
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|+.|+|+ |.+...|-+++.... .|. . ..++-.+.+|+...+.| +.||.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g~-------------~-~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE-------------D-AFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------S-CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CCc-------------c-cccccccCCCCEEEEEc--CCCEEE
Confidence 3678999999885 877778887765321 000 0 11333567888877776 799999
Q ss_pred EEeecchhhhhccceEEEEEe
Q 009960 454 NLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~ 474 (521)
.|+|-+ |. ||-..+.|+
T Consensus 116 ~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--Cc--CCEEEEEEC
Confidence 999987 66 999988773
No 125
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.99 E-value=0.003 Score=53.07 Aligned_cols=36 Identities=14% Similarity=0.220 Sum_probs=29.4
Q ss_pred CCCCEEEEEEEecCCeeeEEeecchhhhhccceEEEEEeC
Q 009960 436 YPGGWTAVYAFLDNPGMWNLRSQLLQNWFLGQELYIRVHN 475 (521)
Q Consensus 436 p~~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 475 (521)
.+|....+ .++.||.|.|+|-. |...||-..+.|.+
T Consensus 59 ~pG~t~~~--tF~~~G~y~y~C~~--H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 59 KINENYVL--TVTQPGAYLVKCTP--HYAMGMIALIAVGD 94 (123)
T ss_dssp CTTCCEEE--ECCSCEEEEEECTT--TGGGTCEEEEEESS
T ss_pred CCCCEEEE--EeCCCEEEEEEeCC--cccCCCEEEEEEcC
Confidence 46776554 45899999999984 99999999999975
No 126
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.87 E-value=0.0019 Score=54.21 Aligned_cols=38 Identities=16% Similarity=0.345 Sum_probs=30.4
Q ss_pred eCCCCEEEEEEEecCCeeeEEeecchhhhhccceEEEEEeCC
Q 009960 435 VYPGGWTAVYAFLDNPGMWNLRSQLLQNWFLGQELYIRVHNS 476 (521)
Q Consensus 435 vp~~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 476 (521)
+.+|+...+. ++.||.|.|+|-. |...||-..+.|.++
T Consensus 58 ~~pG~t~~~t--F~~~G~y~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVVK--FDKEGVYGFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEEE--CCSCEEEEEECST--TTTTTCEEEEEESSC
T ss_pred cCCCCEEEEE--eCCCeEEEEEeCC--ccccCCEEEEEEcCC
Confidence 3567765554 4899999999985 999999999999753
No 127
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.61 E-value=0.0058 Score=52.13 Aligned_cols=74 Identities=18% Similarity=0.154 Sum_probs=51.8
Q ss_pred eEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCch-hhhcCC
Q 009960 6 LINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSIN-FQKAGG 84 (521)
Q Consensus 6 ~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~~-~q~~~G 84 (521)
.|.++.|++|++.++|. +..+++-.-.+ | +..-+.||+.-++.|+. +++|+|+|.|..- ...-.+
T Consensus 61 ~l~Vp~G~~V~~~vts~-DV~Hsf~ip~~---------~---~k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H~~ 126 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSP-DVIHGFHVEGT---------N---INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQN 126 (135)
T ss_dssp SEEEETTSEEEEEEEBS-SSCEEEEETTS---------S---CEEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTSTT
T ss_pred EEEEcCCCEEEEEEEeC-CccceEEecCC---------C---ceeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCcCC
Confidence 68999999999999997 34444333222 1 12336789988889985 7899999999631 111147
Q ss_pred ceecEEEeC
Q 009960 85 GFGPIRVNN 93 (521)
Q Consensus 85 l~G~liV~~ 93 (521)
|.|.++|.+
T Consensus 127 M~g~v~V~~ 135 (135)
T 2cua_A 127 MFGTIVVKE 135 (135)
T ss_dssp CEEEEEEEC
T ss_pred CEEEEEEEC
Confidence 999998863
No 128
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.41 E-value=0.013 Score=61.33 Aligned_cols=74 Identities=14% Similarity=0.142 Sum_probs=58.5
Q ss_pred EEecCCCcEEEEEEEcCC---CCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCC
Q 009960 374 VVTGNHKGWIELVFNNNL---DVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNP 450 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnp 450 (521)
.+.++.|+.|+|++.|.+ +..|-|-+.+... -+.+.||....+.|+++.|
T Consensus 559 eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtadkP 611 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVADKP 611 (638)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECCSC
T ss_pred EEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcCCC
Confidence 467899999999999974 6778777654321 1357789999999999999
Q ss_pred eeeEEeecchhhh-hccceEEEEEe
Q 009960 451 GMWNLRSQLLQNW-FLGQELYIRVH 474 (521)
Q Consensus 451 G~w~~HCHil~H~-d~GMm~~~~V~ 474 (521)
|.|.++|...-|. |.+|...+.|+
T Consensus 612 GvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 612 GLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred EEEEEECCCcCCCCcccceEEEEEe
Confidence 9999999975443 56788888775
No 129
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=96.35 E-value=0.01 Score=49.68 Aligned_cols=71 Identities=8% Similarity=0.012 Sum_probs=44.7
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|++|.|+ |.+. .|-+++.. +.+.. .... +.+.+|+...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~--n~d~-~H~v~~~~----------~~~p~-~~~~-----------~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-GHNVETIK----------GMIPD-GAEA-----------FKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-SCCCEECT----------TCSCT-TCCC-----------CBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCC-CcEEEEcc----------cccCC-Ccce-----------eecCCCCEEEEEe--CCCEEE
Confidence 4678999998885 4433 45555543 11111 0001 1234677666555 899999
Q ss_pred EEeecchhhhhccceEEEEEeC
Q 009960 454 NLRSQLLQNWFLGQELYIRVHN 475 (521)
Q Consensus 454 ~~HCHil~H~d~GMm~~~~V~~ 475 (521)
.|+|-+ |.. |-..+.|.+
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEETT--EEE--EEEEEEESS
T ss_pred EEEeCC--Ccc--CEEEEEEeC
Confidence 999987 555 888888865
No 130
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.12 E-value=0.016 Score=51.25 Aligned_cols=75 Identities=17% Similarity=0.147 Sum_probs=54.8
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCc-hhhhcC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSI-NFQKAG 83 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~-~~q~~~ 83 (521)
..|.++.|++|++.++|. +..+++..-++. ++.-+.||+.-++.|++ +++|+|++.|.. -+..-.
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf~IP~lg------------ik~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~Hs 158 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGFHVEGTN------------INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQ 158 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEEEETTSS------------CEEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTGG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEEEECCCC------------eEEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCcC
Confidence 468999999999999997 555555443321 12335689999999985 789999999983 233445
Q ss_pred CceecEEEeC
Q 009960 84 GGFGPIRVNN 93 (521)
Q Consensus 84 Gl~G~liV~~ 93 (521)
+|.|-++|++
T Consensus 159 ~M~g~V~V~e 168 (168)
T 3s8f_B 159 NMFGTIVVKE 168 (168)
T ss_dssp GCEEEEEEEC
T ss_pred CCEEEEEEeC
Confidence 6999999873
No 131
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.92 E-value=0.015 Score=51.33 Aligned_cols=87 Identities=6% Similarity=-0.089 Sum_probs=60.5
Q ss_pred EEec-CCCcEEEEEEEcCCCCc-----cceeecCcceEEEeecc-----------c--cCCCCCCCCCCCCCCCcceEEE
Q 009960 374 VVTG-NHKGWIELVFNNNLDVI-----DSWHLDGFGFHVVGFGI-----------G--EWAPESRSTYNLFDPVVRSTVQ 434 (521)
Q Consensus 374 ~~~~-~~g~~v~~vi~N~~~~~-----HP~HlHG~~F~Vl~~g~-----------g--~~~~~~~~~~n~~~p~~rDTv~ 434 (521)
.+++ +.|+.|.|+|.|.+..+ |-|- |...+. + .|-+.. .......+..
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~v-------i~~~~~~~~v~~~~m~~~~~~~v~~~------d~~vl~~t~~ 125 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLV-------IAKAEDMDGVFKDGVGAADTDYVKPD------DARVVAHTKL 125 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCE-------EEEGGGHHHHHHHHGGGGGGTTSCTT------CTTEEEECCC
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEE-------eccCcchhhhHHHhhhcccccccccc------ccchhcccee
Confidence 3678 89999999999998653 5443 333221 0 111000 0012345667
Q ss_pred eCCCCEEEEEEEec--CCeeeEEeecchhhhhccceEEEEEe
Q 009960 435 VYPGGWTAVYAFLD--NPGMWNLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 435 vp~~g~v~irf~ad--npG~w~~HCHil~H~d~GMm~~~~V~ 474 (521)
|.||+...|.|.++ .||.|-|+|-+-.|.. ||-..+.|.
T Consensus 126 l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 126 IGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp BCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred eCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 89999999999998 8999999999888888 898888885
No 132
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.73 E-value=0.046 Score=46.50 Aligned_cols=72 Identities=22% Similarity=0.223 Sum_probs=51.3
Q ss_pred EecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeE
Q 009960 375 VTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWN 454 (521)
Q Consensus 375 ~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~ 454 (521)
+.++.|+.|+|++.|.+ ..|- |.|-+.+ . -+.+.||....+.|.++.||.|.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~~~------------------~--k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHG-------FHVEGTN------------------I--NVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEE-------EEETTSS------------------C--EEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccce-------EEecCCC------------------c--eeEeCCCCcEEEEEEcCCCEEEE
Confidence 57889999999999874 4444 4332111 1 14467788889999999999999
Q ss_pred Eeecchh-hhhccceEEEEEe
Q 009960 455 LRSQLLQ-NWFLGQELYIRVH 474 (521)
Q Consensus 455 ~HCHil~-H~d~GMm~~~~V~ 474 (521)
+.|...- .-|.+|-..+.|.
T Consensus 114 ~~C~e~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGHQNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EECcccCCCCcCCCEEEEEEE
Confidence 9997621 2335888888775
No 133
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.34 E-value=0.055 Score=45.58 Aligned_cols=87 Identities=9% Similarity=0.050 Sum_probs=60.6
Q ss_pred EEecCCC-cEEEEEEEcCCCC-----ccceeecCcceEEEeecc-----------c---cCCCCCCCCCCCCCCCcceEE
Q 009960 374 VVTGNHK-GWIELVFNNNLDV-----IDSWHLDGFGFHVVGFGI-----------G---EWAPESRSTYNLFDPVVRSTV 433 (521)
Q Consensus 374 ~~~~~~g-~~v~~vi~N~~~~-----~HP~HlHG~~F~Vl~~g~-----------g---~~~~~~~~~~n~~~p~~rDTv 433 (521)
.++++.| +.|.+++.|.+.. .|-|- +...+. + .|-+.. ..-....+.
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~v-------i~~~~~~~~~~~~~m~~~~~~~~v~~~------~~~~~~~t~ 85 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHNWV-------LAKSADVGDVAKEGAHAGADNNFVTPG------DKRVIAFTP 85 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBCCE-------EEEGGGHHHHHHHHHTTCGGGTTSCTT------CTTCSEECC
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccceE-------EecCcchhhhHHHhhhccccccccccc------cccceeeee
Confidence 4688999 9999999998754 35443 333221 0 111100 000123566
Q ss_pred EeCCCCEEEEEEEec---CCeeeEEeecchhhhhccceEEEEEe
Q 009960 434 QVYPGGWTAVYAFLD---NPGMWNLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 434 ~vp~~g~v~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 474 (521)
.|.||++..|.|.++ .||.|-|.|-+-.|.. ||-..+.|.
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 789999999999997 8999999999888888 898888885
No 134
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.77 E-value=0.079 Score=44.55 Aligned_cols=93 Identities=10% Similarity=-0.009 Sum_probs=59.6
Q ss_pred EEec-CCCcEEEEEEEcCCCCc-----cceeecCcceEEEeeccc-c-----CCCCCCCCCCC-CCC-CcceEEEeCCCC
Q 009960 374 VVTG-NHKGWIELVFNNNLDVI-----DSWHLDGFGFHVVGFGIG-E-----WAPESRSTYNL-FDP-VVRSTVQVYPGG 439 (521)
Q Consensus 374 ~~~~-~~g~~v~~vi~N~~~~~-----HP~HlHG~~F~Vl~~g~g-~-----~~~~~~~~~n~-~~p-~~rDTv~vp~~g 439 (521)
.+.+ +.|+.|.+++.|.+..+ |-|-| ...+.. . ........|-. .++ ....|..|.||+
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 90 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV-------SKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGE 90 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSCHHHHCBCCEE-------EETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEEecCCcEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHhhhhccccccccccccchhhccceeeCCCC
Confidence 3678 78999999999998653 65433 221100 0 00000000100 011 123566789999
Q ss_pred EEEEEEEec--CCe-eeEEeecchhhhhccceEEEEEe
Q 009960 440 WTAVYAFLD--NPG-MWNLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 440 ~v~irf~ad--npG-~w~~HCHil~H~d~GMm~~~~V~ 474 (521)
+..|.|.+. .|| .|-|.|-+-.|.. ||-..+.|.
T Consensus 91 s~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 91 TDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 999999998 898 5999999888888 899888885
No 135
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.56 E-value=0.19 Score=44.31 Aligned_cols=73 Identities=21% Similarity=0.249 Sum_probs=55.5
Q ss_pred EecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeeeE
Q 009960 375 VTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMWN 454 (521)
Q Consensus 375 ~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w~ 454 (521)
+.++.|+.|++.++|. +..|.|-+=.. + .. +.+.||....+.|.++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~l-------g-----------------ik---~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGT-------N-----------------IN---VEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTS-------S-----------------CE---EEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCC-------C-----------------eE---EEecCCceeEEEEEeCCCEEEE
Confidence 5688999999999997 55566544221 1 11 3456788889999999999999
Q ss_pred Eeecc-hhhhhccceEEEEEeC
Q 009960 455 LRSQL-LQNWFLGQELYIRVHN 475 (521)
Q Consensus 455 ~HCHi-l~H~d~GMm~~~~V~~ 475 (521)
+.|.. -.+-+.+|-..+.|++
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEEC
T ss_pred EECCcCCCCCcCCCEEEEEEeC
Confidence 99995 4567889999988863
No 136
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.50 E-value=0.13 Score=43.36 Aligned_cols=86 Identities=10% Similarity=0.061 Sum_probs=59.3
Q ss_pred EEec-CCCcEEEEEEEcCCCCc-----cceeecCcceEEEeecc-----------c---cCCCCCCCCCCCCCC-CcceE
Q 009960 374 VVTG-NHKGWIELVFNNNLDVI-----DSWHLDGFGFHVVGFGI-----------G---EWAPESRSTYNLFDP-VVRST 432 (521)
Q Consensus 374 ~~~~-~~g~~v~~vi~N~~~~~-----HP~HlHG~~F~Vl~~g~-----------g---~~~~~~~~~~n~~~p-~~rDT 432 (521)
.+++ +.|+.|.+++.|.+..+ |-|-| ...+. + .|-+. .++ ....+
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~t 84 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVL-------TKDADKQAVATDGMGAGLAQDYVKA-------GDTRVIAHT 84 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHCBCCEE-------EEGGGHHHHHHHHHHHCGGGTTSCT-------TCTTEEEEC
T ss_pred eEEEecCCCEEEEEEEECCCcccccCcceEEE-------cCccchhhhHHHhhhhccccccccc-------ccccceeee
Confidence 3678 88999999999998653 54433 33220 0 11110 011 12345
Q ss_pred EEeCCCCEEEEEEEec--CCee-eEEeecchhhhhccceEEEEEe
Q 009960 433 VQVYPGGWTAVYAFLD--NPGM-WNLRSQLLQNWFLGQELYIRVH 474 (521)
Q Consensus 433 v~vp~~g~v~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 474 (521)
..|.||++..|.|.++ .||. |-|.|-+-.|.. ||-..+.|.
T Consensus 85 ~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 85 KVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp CCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 5789999999999998 7866 999999888888 898888875
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.20 E-value=0.15 Score=42.79 Aligned_cols=92 Identities=8% Similarity=-0.063 Sum_probs=58.9
Q ss_pred EEec-CCCcEEEEEEEcCCCC-----ccceeecCcceEEEeeccc------cCCCCCCCCC-CCCCC-CcceEEEeCCCC
Q 009960 374 VVTG-NHKGWIELVFNNNLDV-----IDSWHLDGFGFHVVGFGIG------EWAPESRSTY-NLFDP-VVRSTVQVYPGG 439 (521)
Q Consensus 374 ~~~~-~~g~~v~~vi~N~~~~-----~HP~HlHG~~F~Vl~~g~g------~~~~~~~~~~-n~~~p-~~rDTv~vp~~g 439 (521)
.+++ +.|+.|.+++.|.+.. .|-|-| ...+.. .........| .-.++ ....|-.|.||+
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 4678 8999999999999855 365443 221100 0000000001 00011 123455689999
Q ss_pred EEEEEEEec--CCee-eEEeecchhhhhccceEEEEE
Q 009960 440 WTAVYAFLD--NPGM-WNLRSQLLQNWFLGQELYIRV 473 (521)
Q Consensus 440 ~v~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V 473 (521)
+..|.|.+. .||. |-|.|-+-.|.. ||-..+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999997 7876 999999888888 88888876
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=91.49 E-value=0.73 Score=38.24 Aligned_cols=94 Identities=7% Similarity=-0.026 Sum_probs=57.6
Q ss_pred EEecCC-CcEEEEEEEcCCCCccceeecCcceEEEeeccc-cCC-C---CC-CCCC-CC-CCCCcceEEEeCCCCEEEEE
Q 009960 374 VVTGNH-KGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIG-EWA-P---ES-RSTY-NL-FDPVVRSTVQVYPGGWTAVY 444 (521)
Q Consensus 374 ~~~~~~-g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g-~~~-~---~~-~~~~-n~-~~p~~rDTv~vp~~g~v~ir 444 (521)
.+.++. |+.|+++|.|.+..+ --.=||.|-+...+.- ... . .. ...| .- .......|..|.||+...|.
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNLP--KNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSCC--HHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred EEEEecCCCEEEEEEEECCccc--ccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 467875 999999999998542 0001334433322110 000 0 00 0011 00 12245577789999999999
Q ss_pred EEec---CCeeeEEeecchhhhhccceEEEEE
Q 009960 445 AFLD---NPGMWNLRSQLLQNWFLGQELYIRV 473 (521)
Q Consensus 445 f~ad---npG~w~~HCHil~H~d~GMm~~~~V 473 (521)
|.+. .+|.|-|-|- .|. ||-..+.|
T Consensus 97 f~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 9997 8999999999 688 89888877
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=83.25 E-value=9.2 Score=31.33 Aligned_cols=71 Identities=13% Similarity=0.222 Sum_probs=49.8
Q ss_pred cCcEE--EEEEEecCccceeeEEEc-Ccee--EEEEecCCccc--------ceeeeeEEecCCcEEEEEEEeCC--CCcc
Q 009960 164 KGMTY--RFRISNVGSVFSFNFRIQ-NHKM--VLVETEGSYTN--------QITLRSLDVHVGQSYSVLVTADQ--NEAD 228 (521)
Q Consensus 164 ~G~~~--rlRliNa~~~~~~~~~i~-gh~~--~via~DG~~~~--------p~~~d~v~l~pGeR~dv~v~~~~--~~g~ 228 (521)
.|+.+ .|.+.|.+.... .|.+. |+.+ .|...+|..+- ........|.|||.+.+-...++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~~v-~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAI-EFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSCE-EEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCcE-EEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 55544 778889887543 66664 5554 44444576552 23467899999999999999985 4799
Q ss_pred eEEEecc
Q 009960 229 YYIVASP 235 (521)
Q Consensus 229 ~~i~~~~ 235 (521)
|.+++..
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998764
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=79.16 E-value=2 Score=38.85 Aligned_cols=73 Identities=11% Similarity=0.086 Sum_probs=52.9
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|+.|++.|++.+- .| .|+|-+.+. . +.+-||....+.|.++.||.|
T Consensus 42 ~l~lP~g~~V~~~lTS~DV-iH-------SF~IP~lgv-----------------K---~daiPGr~n~l~~~~~~pG~y 93 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSV-MH-------SFFIPRLGS-----------------Q---IYAMAGMQTRLHLIANEPGTY 93 (205)
T ss_dssp EEEEETTSCEEEEEEESSS-CE-------EEEEGGGTE-----------------E---EEECTTCCEEEEECCSSSEEE
T ss_pred eEEEeCCCEEEEEEecCCc-ee-------eEEecccCc-----------------E---EEecCCceEEEEEEeCCCeEE
Confidence 4678999999999998743 34 455543321 2 234468888899999999999
Q ss_pred EEeecchh-hhhccceEEEEEe
Q 009960 454 NLRSQLLQ-NWFLGQELYIRVH 474 (521)
Q Consensus 454 ~~HCHil~-H~d~GMm~~~~V~ 474 (521)
...|--+- --+..|-..+.|.
T Consensus 94 ~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 94 DGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEEECSCCSTTSTTCCEEEEEE
T ss_pred EEEcccccccchhhceEEEEEE
Confidence 99998653 3456677777777
No 141
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=73.71 E-value=10 Score=31.10 Aligned_cols=62 Identities=11% Similarity=0.114 Sum_probs=42.2
Q ss_pred EEEEEEEECCCCCeeEEecCcCC-----------CCCCCCCCCccc----CcccCCCCceEEEEEEcc--eeeeEEEec
Q 009960 14 FVHVNVFNNLDEPLLFTWNGIQQ-----------RLNSWQDGVSGT----NCPILPRKNWTYVFQVKD--QIGSFFYFP 75 (521)
Q Consensus 14 ~v~v~~~N~l~~~~~iH~HG~~~-----------~~~~~~DG~~~~----q~~i~pG~~~~y~f~~~~--~~Gt~wYH~ 75 (521)
.+.++++|..+.+.++.+.--.. ..=-|+||-... ...|+||++.+|+...++ .+|+|..+.
T Consensus 21 ~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a 99 (120)
T 3isy_A 21 KFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKV 99 (120)
T ss_dssp EEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEE
T ss_pred EEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEE
Confidence 56678899998888877643211 001136665433 345999999999999974 489998764
No 142
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=70.86 E-value=5 Score=37.84 Aligned_cols=76 Identities=14% Similarity=0.181 Sum_probs=54.2
Q ss_pred eEEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCee
Q 009960 373 SVVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGM 452 (521)
Q Consensus 373 ~~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~ 452 (521)
+.+.++.|+.|++.+++.+ ..|- |+|-+.|. ..| +-||....+.|.++.||.
T Consensus 171 n~l~lP~g~~v~~~~tS~D-ViHs-------f~ip~l~~-----------------k~d---a~PG~~n~~~~~~~~~G~ 222 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD-VIHS-------WTVPAFGV-----------------KQD---AVPGRLAQLWFRAEREGI 222 (262)
T ss_dssp SCEEEETTSEEEEEEEESS-SCEE-------EEEGGGTE-----------------EEE---ECBTCCEEEEEECCSCEE
T ss_pred ceEEEecCCEEEEEEEECc-ccce-------eeecccCc-----------------eEE---ecCCceeEEEEecCCcEE
Confidence 3477899999999999874 3344 44433321 234 446788889999999999
Q ss_pred eEEeecch-hhhhccceEEEEEeCC
Q 009960 453 WNLRSQLL-QNWFLGQELYIRVHNS 476 (521)
Q Consensus 453 w~~HCHil-~H~d~GMm~~~~V~~~ 476 (521)
|...|--. .--+..|...++|..+
T Consensus 223 y~g~Cse~CG~~H~~M~~~v~vv~~ 247 (262)
T 2gsm_B 223 FFGQCSELCGISHAYMPITVKVVSE 247 (262)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECH
T ss_pred EEEEChHhcccCcccCeEEEEEEcH
Confidence 99999864 3446677777877654
No 143
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=65.22 E-value=16 Score=34.95 Aligned_cols=77 Identities=13% Similarity=0.195 Sum_probs=56.1
Q ss_pred eEEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCee
Q 009960 373 SVVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGM 452 (521)
Q Consensus 373 ~~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~ 452 (521)
+.+.++.|+.|++.+++.+ ..|-|.+ -+.|. ..| +-||....+.|.++.||.
T Consensus 189 N~lvlP~g~~V~~~ltS~D-ViHsf~i-------P~lg~-----------------k~d---aiPG~~n~~~~~~~~~G~ 240 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VIHAWTI-------PAFAV-----------------KQD---AVPGRIAQLWFSVDQEGV 240 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SCEEEEE-------GGGTE-----------------EEE---ECTTCCEEEEEECSSSEE
T ss_pred ceEEEEcCCEEEEEEEeCC-ccceeeE-------cccCc-----------------eEE---ecCCceEEEEEEeCCCEE
Confidence 3467899999999999864 4455444 22211 233 456788889999999999
Q ss_pred eEEeecch-hhhhccceEEEEEeCCC
Q 009960 453 WNLRSQLL-QNWFLGQELYIRVHNSD 477 (521)
Q Consensus 453 w~~HCHil-~H~d~GMm~~~~V~~~~ 477 (521)
|...|.-+ ..-|..|-..++|..++
T Consensus 241 y~g~CsE~CG~~Hs~M~~~v~vvs~~ 266 (298)
T 3hb3_B 241 YFGQCSELCGINHAYMPIVVKAVSQE 266 (298)
T ss_dssp EEECCCSCCSTTTTSCCEEEEEECHH
T ss_pred EEEEcccccCcCccCCeeEEEEEcHH
Confidence 99999954 45677888888887654
No 144
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=61.22 E-value=19 Score=29.17 Aligned_cols=46 Identities=15% Similarity=0.403 Sum_probs=31.7
Q ss_pred EEEEEEEecCccc-eeeEEEcCc-eeEEEEecCCcccceeeeeEEecCCcEEEEEEEe
Q 009960 167 TYRFRISNVGSVF-SFNFRIQNH-KMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTA 222 (521)
Q Consensus 167 ~~rlRliNa~~~~-~~~~~i~gh-~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~ 222 (521)
.|+|+|+|.+... .|.|.+.|. .++++ | + ..+.+.|||..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 6999999988754 667777663 23332 2 1 14899999988777654
No 145
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=60.65 E-value=27 Score=31.37 Aligned_cols=73 Identities=12% Similarity=-0.054 Sum_probs=51.0
Q ss_pred eEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCc-hhhhcCC
Q 009960 6 LINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSI-NFQKAGG 84 (521)
Q Consensus 6 ~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~-~~q~~~G 84 (521)
.|.+..|+.|++.+++. +.-+++-.-.+ +++.-+-||..-...|.+ +++|+|+..|.. -+.--..
T Consensus 42 ~l~lP~g~~V~~~lTS~-DViHSF~IP~l------------gvK~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~Hs~ 107 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSN-SVMHSFFIPRL------------GSQIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGHSG 107 (205)
T ss_dssp EEEEETTSCEEEEEEES-SSCEEEEEGGG------------TEEEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTSTT
T ss_pred eEEEeCCCEEEEEEecC-CceeeEEeccc------------CcEEEecCCceEEEEEEe-CCCeEEEEEcccccccchhh
Confidence 58899999999999986 33444443332 122335689888888885 789999999983 2233334
Q ss_pred ceecEEEe
Q 009960 85 GFGPIRVN 92 (521)
Q Consensus 85 l~G~liV~ 92 (521)
|.+.++|.
T Consensus 108 M~~~v~vv 115 (205)
T 1cyx_A 108 MKFKAIAT 115 (205)
T ss_dssp CCEEEEEE
T ss_pred ceEEEEEE
Confidence 88888887
No 146
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=56.96 E-value=12 Score=34.46 Aligned_cols=77 Identities=12% Similarity=0.150 Sum_probs=53.8
Q ss_pred eEEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCee
Q 009960 373 SVVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGM 452 (521)
Q Consensus 373 ~~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~ 452 (521)
+.+.++.|+.|++.+++.+ ..| .|+|-+.|. ..| .-||....+.|.++.||.
T Consensus 140 n~lvlP~~~~Vr~~vtS~D-ViH-------sf~vP~lg~-----------------K~D---aiPGr~n~~~~~~~~~G~ 191 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED-VLH-------SWAVPSLGL-----------------KTD---AIPGRLNQTTLMSSRPGL 191 (227)
T ss_dssp SCEEEETTSCEEEEEEESS-SCE-------EEEEGGGTE-----------------EEE---ECTTCCEEEEECCSSCEE
T ss_pred ceEEEecCCEEEEEEEeCc-ccc-------eeeecccCc-----------------EEE---ecCCceEEEEEecCCcEE
Confidence 3467899999999999864 334 454433321 334 345777888999999999
Q ss_pred eEEeecchh-hhhccceEEEEEeCCC
Q 009960 453 WNLRSQLLQ-NWFLGQELYIRVHNSD 477 (521)
Q Consensus 453 w~~HCHil~-H~d~GMm~~~~V~~~~ 477 (521)
+...|.-+- --|.-|-..++|..++
T Consensus 192 y~g~Cse~CG~~Hs~M~~~v~vv~~~ 217 (227)
T 1v54_B 192 YYGQCSEICGSNHSFMPIVLELVPLK 217 (227)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEEehhhcccccccCeEEEEEEcHH
Confidence 999998653 3456677777776543
No 147
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=54.11 E-value=19 Score=29.75 Aligned_cols=58 Identities=5% Similarity=0.174 Sum_probs=33.4
Q ss_pred EEecCCEEEEEEEECCC---CC--eeEE--ecCcCCCC-CCCCCCCcccCcccCCCCceEEEEEEc
Q 009960 8 NSTTNDFVHVNVFNNLD---EP--LLFT--WNGIQQRL-NSWQDGVSGTNCPILPRKNWTYVFQVK 65 (521)
Q Consensus 8 ~v~~Gd~v~v~~~N~l~---~~--~~iH--~HG~~~~~-~~~~DG~~~~q~~i~pG~~~~y~f~~~ 65 (521)
.+++|..+.|.+.=..+ .. +.++ ..|+...- ....|+=-++.|||.+|+.++|.+.++
T Consensus 28 ~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 28 IIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp EEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred EEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeE
Confidence 57788887777762221 11 2232 24544321 112233223489999999999998763
No 148
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=51.74 E-value=41 Score=31.53 Aligned_cols=73 Identities=18% Similarity=0.088 Sum_probs=50.2
Q ss_pred eEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCc--hhhhcC
Q 009960 6 LINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSI--NFQKAG 83 (521)
Q Consensus 6 ~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~--~~q~~~ 83 (521)
.|.+..|+.|++.+++. +.-++...-.+. ++.-+-||..-...|.+ +++|+|+..|.. +..- .
T Consensus 172 ~l~lP~g~~v~~~~tS~-DViHsf~ip~l~------------~k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H-~ 236 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGA-DVIHSWTVPAFG------------VKQDAVPGRLAQLWFRA-EREGIFFGQCSELCGISH-A 236 (262)
T ss_dssp CEEEETTSEEEEEEEES-SSCEEEEEGGGT------------EEEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG-G
T ss_pred eEEEecCCEEEEEEEEC-cccceeeecccC------------ceEEecCCceeEEEEec-CCcEEEEEEChHhcccCc-c
Confidence 68999999999999987 444444443331 12224578888888884 889999999983 3222 2
Q ss_pred CceecEEEeC
Q 009960 84 GGFGPIRVNN 93 (521)
Q Consensus 84 Gl~G~liV~~ 93 (521)
.|.+.++|.+
T Consensus 237 ~M~~~v~vv~ 246 (262)
T 2gsm_B 237 YMPITVKVVS 246 (262)
T ss_dssp GCCEEEEEEC
T ss_pred cCeEEEEEEc
Confidence 3777777765
No 149
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=50.91 E-value=14 Score=30.65 Aligned_cols=48 Identities=17% Similarity=0.190 Sum_probs=29.1
Q ss_pred EEEEEEECCCCCe---eEEecCcCCCCC---CCCCCCcccCcccCCCCceEEEE
Q 009960 15 VHVNVFNNLDEPL---LFTWNGIQQRLN---SWQDGVSGTNCPILPRKNWTYVF 62 (521)
Q Consensus 15 v~v~~~N~l~~~~---~iH~HG~~~~~~---~~~DG~~~~q~~i~pG~~~~y~f 62 (521)
-.|++.|....+. +=||.=....+. -.-+||-|-|.-|.||++|.|.=
T Consensus 33 Y~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 33 YSIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEE
T ss_pred EEEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeC
Confidence 4688899876654 457753211110 11344444488899999888854
No 150
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=49.30 E-value=23 Score=29.26 Aligned_cols=58 Identities=26% Similarity=0.332 Sum_probs=33.6
Q ss_pred EEecCCEEEEEEE---ECCCCCeeEEe----cCcCCCC-CCCCCCCc-ccCcccCCCCceEEEEEEc
Q 009960 8 NSTTNDFVHVNVF---NNLDEPLLFTW----NGIQQRL-NSWQDGVS-GTNCPILPRKNWTYVFQVK 65 (521)
Q Consensus 8 ~v~~Gd~v~v~~~---N~l~~~~~iH~----HG~~~~~-~~~~DG~~-~~q~~i~pG~~~~y~f~~~ 65 (521)
.+++|..+.|.+. |.......... -|+...- .+..|+=. ++.|||.+|+.++|.+.++
T Consensus 29 ~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 29 KLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 5678888777776 22222222222 3443321 12234432 3489999999999998875
No 151
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=48.88 E-value=52 Score=31.42 Aligned_cols=76 Identities=16% Similarity=0.003 Sum_probs=51.5
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCc-hhhhcC
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSI-NFQKAG 83 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~-~~q~~~ 83 (521)
..|.+..|+.|++.+++. +.-++...-.+. ++.-+-||..-...|. ++++|+|+..|.. -+.--.
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~lg------------~k~daiPG~~n~~~~~-~~~~G~y~g~CsE~CG~~Hs 254 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPAFA------------VKQDAVPGRIAQLWFS-VDQEGVYFGQCSELCGINHA 254 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGGGT------------EEEEECTTCCEEEEEE-CSSSEEEEECCCSCCSTTTT
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEcccC------------ceEEecCCceEEEEEE-eCCCEEEEEEcccccCcCcc
Confidence 368899999999999995 344444443331 1222457888888888 4889999999983 222333
Q ss_pred CceecEEEeCC
Q 009960 84 GGFGPIRVNNR 94 (521)
Q Consensus 84 Gl~G~liV~~~ 94 (521)
.|.+.+.+.++
T Consensus 255 ~M~~~v~vvs~ 265 (298)
T 3hb3_B 255 YMPIVVKAVSQ 265 (298)
T ss_dssp SCCEEEEEECH
T ss_pred CCeeEEEEEcH
Confidence 47777777763
No 152
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=48.25 E-value=14 Score=30.59 Aligned_cols=56 Identities=18% Similarity=0.203 Sum_probs=32.3
Q ss_pred EEEEEEECCCCCe---eEEecCcCCCCC---CCCCCCcccCcccCCCCceEEEEEE--cceeee
Q 009960 15 VHVNVFNNLDEPL---LFTWNGIQQRLN---SWQDGVSGTNCPILPRKNWTYVFQV--KDQIGS 70 (521)
Q Consensus 15 v~v~~~N~l~~~~---~iH~HG~~~~~~---~~~DG~~~~q~~i~pG~~~~y~f~~--~~~~Gt 70 (521)
-.|++.|....+. +=||.=....+. -.-+||-|-|.-|.||++|.|.=-. ..+.|+
T Consensus 32 Y~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~~L~tp~G~ 95 (126)
T 1xvs_A 32 YLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALDTPVGV 95 (126)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEEEEESSSEEE
T ss_pred EEEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCCcCcCCCcEE
Confidence 4688889877654 457753211110 1124444448889999988886433 234554
No 153
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=46.09 E-value=17 Score=30.51 Aligned_cols=56 Identities=20% Similarity=0.245 Sum_probs=32.2
Q ss_pred EEEEEEECCCCCe---eEEecCcCCCCC---CCCCCCcccCcccCCCCceEEEEEE--cceeee
Q 009960 15 VHVNVFNNLDEPL---LFTWNGIQQRLN---SWQDGVSGTNCPILPRKNWTYVFQV--KDQIGS 70 (521)
Q Consensus 15 v~v~~~N~l~~~~---~iH~HG~~~~~~---~~~DG~~~~q~~i~pG~~~~y~f~~--~~~~Gt 70 (521)
-.|++.|....+. +=||-=....+. -.-+||-|-|+-|.||++|.|.=-. ..+.|+
T Consensus 37 Y~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg~~L~Tp~G~ 100 (139)
T 1xq4_A 37 YTVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSGCPLPTPIGT 100 (139)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEEEEESSSEEE
T ss_pred EEEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCCcCcCCCceE
Confidence 4688899876654 457753211110 0124443448889999988886433 244554
No 154
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=42.46 E-value=15 Score=30.65 Aligned_cols=56 Identities=16% Similarity=0.220 Sum_probs=32.3
Q ss_pred EEEEEEECCCCCe---eEEecCcCCCCC---CCCCCCcccCcccCCCCceEEEEEE--cceeee
Q 009960 15 VHVNVFNNLDEPL---LFTWNGIQQRLN---SWQDGVSGTNCPILPRKNWTYVFQV--KDQIGS 70 (521)
Q Consensus 15 v~v~~~N~l~~~~---~iH~HG~~~~~~---~~~DG~~~~q~~i~pG~~~~y~f~~--~~~~Gt 70 (521)
-.|++.|....+. +=||-=....+. -.-+||-|-|+-|.||++|.|.=-. ..+.|+
T Consensus 32 Y~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg~~L~Tp~G~ 95 (134)
T 1tza_A 32 YTITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGTVLDTPFGI 95 (134)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEEEEESSSEEE
T ss_pred EEEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCCcCcCCCceE
Confidence 4688899877654 457742211110 1124444448889999988886433 244554
No 155
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=42.23 E-value=22 Score=34.31 Aligned_cols=73 Identities=16% Similarity=0.149 Sum_probs=51.3
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|+.|++.+++.+ ..|- |+|-+.+. ..| +-||....+.|.++.||.|
T Consensus 152 ~l~lP~g~~V~~~lTS~D-ViHs-------f~IP~lg~-----------------k~D---aiPGr~n~~~~~~~~~G~y 203 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNS-VMNS-------FFIPRLGS-----------------QIY---AMAGMQTRLHLIANEPGTY 203 (315)
T ss_dssp BCCCCSSSEEEEEECBSS-SCEE-------EEEGGGTE-----------------EEE---ECBTSCEEEEEECCSCBCC
T ss_pred eEEEeCCCEEEEEEEeCC-ccce-------eeecccCc-----------------EEe---ecCCcceeeEEecCCCeEE
Confidence 357899999999998774 3344 54433221 234 4467888899999999999
Q ss_pred EEeecchh-hhhccceEEEEEe
Q 009960 454 NLRSQLLQ-NWFLGQELYIRVH 474 (521)
Q Consensus 454 ~~HCHil~-H~d~GMm~~~~V~ 474 (521)
...|--+- --|..|-..++|.
T Consensus 204 ~g~CsE~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 204 DGISASYSGPGFSGMKFKAIAT 225 (315)
T ss_dssp EEBCCSCCSTTTTTCCEECCBC
T ss_pred EEeccccchhhHHhccceEEEe
Confidence 99998653 3455677777776
No 156
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=36.91 E-value=26 Score=27.29 Aligned_cols=68 Identities=15% Similarity=0.191 Sum_probs=37.6
Q ss_pred EecCcEEEEEEEecCccceeeEEEcCc--eeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCC--CCcceEEEecc
Q 009960 162 VTKGMTYRFRISNVGSVFSFNFRIQNH--KMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQ--NEADYYIVASP 235 (521)
Q Consensus 162 v~~G~~~rlRliNa~~~~~~~~~i~gh--~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~--~~g~~~i~~~~ 235 (521)
-+||+++++|++-...... +. .+- .+++...+|..+.-. .........++.-+.++. ..|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~-p~--~~~~~~v~l~dp~g~~v~~~---~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFH-PL--NELIPLVYIQDPKGNRIAQW---QSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGC-BC--CCEEEEEEEECTTSCEEEEE---EEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCc-CC--CCCceEEEEECCCCCEEEEE---EeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 4899999999875433211 11 111 345555555543211 122233456666666654 35999999874
No 157
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=36.80 E-value=17 Score=30.07 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=20.5
Q ss_pred ceEEEecCcEEEEEEEecCcccee
Q 009960 158 ESFTVTKGMTYRFRISNVGSVFSF 181 (521)
Q Consensus 158 p~~~v~~G~~~rlRliNa~~~~~~ 181 (521)
-.|.|+.||+|||.+.|-+..+.+
T Consensus 71 k~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEEEEE
Confidence 469999999999999998876654
No 158
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=36.56 E-value=1.5e+02 Score=24.44 Aligned_cols=65 Identities=11% Similarity=0.163 Sum_probs=37.5
Q ss_pred CCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCC--------cccCcccCCCCceEEEEEEcceeeeE
Q 009960 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGV--------SGTNCPILPRKNWTYVFQVKDQIGSF 71 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~--------~~~q~~i~pG~~~~y~f~~~~~~Gt~ 71 (521)
|-+|.++.||++.|.|.-+-....+-..-.. .+..-.|++ |.....+..|+...+.|++ .++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~--~~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A-~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGG--TKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTV-KAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTT--BSSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEE-CSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecC--CCccccccceeecceeeeCCCCCcCCCcEEEEEEEE-ccCceE
Confidence 4589999999999999976543333333321 111112322 1001235567778888886 557753
No 159
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=36.15 E-value=36 Score=27.51 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=28.0
Q ss_pred EEEecCCeeeEEeecchhhhhccceEEE-EEeCCC
Q 009960 444 YAFLDNPGMWNLRSQLLQNWFLGQELYI-RVHNSD 477 (521)
Q Consensus 444 rf~adnpG~w~~HCHil~H~d~GMm~~~-~V~~~~ 477 (521)
+|..+.+|..-|=|=...|-..||-+.+ .|....
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 4567889999999999999999999999 776543
No 160
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=35.92 E-value=1.8e+02 Score=23.74 Aligned_cols=66 Identities=12% Similarity=0.101 Sum_probs=43.6
Q ss_pred EEecCcEE--EEEEEecCccceeeEEEcCceeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCC-CCcceEEEecc
Q 009960 161 TVTKGMTY--RFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQ-NEADYYIVASP 235 (521)
Q Consensus 161 ~v~~G~~~--rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~-~~g~~~i~~~~ 235 (521)
.+.+|+.+ +..+-|.|....-.+.+ .+ -+||..+. ..++.|++|+...|.+.... .+|.|.|.+..
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~l-yvng~~v~---t~~v~La~G~s~tv~f~~~~~~~G~~~v~AvV 96 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RV-YINGTLYK---NWTVSLGPKEEKVLTFNWTPTQEGMYRINATV 96 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EE-EETTEEEE---EEEEEECTTCEEEEEEEECCSSCEEEEEEEEE
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EE-EECCEEEe---eEEeccCCCCeEEEEEEEEcCCCcEEEEEEEE
Confidence 67888865 67788988765433322 22 23665542 22457999999998888653 47888887753
No 161
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=35.76 E-value=84 Score=28.61 Aligned_cols=74 Identities=8% Similarity=-0.068 Sum_probs=48.9
Q ss_pred CeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcccCcccCCCCceEEEEEEcceeeeEEEecCc--hhhhc
Q 009960 5 PLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGTNCPILPRKNWTYVFQVKDQIGSFFYFPSI--NFQKA 82 (521)
Q Consensus 5 P~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~q~~i~pG~~~~y~f~~~~~~Gt~wYH~H~--~~q~~ 82 (521)
..+.+..|..|++.++.. +.-++...-.+.. .+| .-||..-...|.+ +++|+|+..|.. +..-+
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~----K~D--------aiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~Hs 205 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGL----KTD--------AIPGRLNQTTLMS-SRPGLYYGQCSEICGSNHS 205 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEEEEEGGGTE----EEE--------ECTTCCEEEEECC-SSCEEEEECCCSCCSTTGG
T ss_pred ceEEEecCCEEEEEEEeC-cccceeeecccCc----EEE--------ecCCceEEEEEec-CCcEEEEEEehhhcccccc
Confidence 468899999999999985 4444444443321 134 3568877778884 889999999983 32222
Q ss_pred CCceecEEEeC
Q 009960 83 GGGFGPIRVNN 93 (521)
Q Consensus 83 ~Gl~G~liV~~ 93 (521)
-|.+.+.+.+
T Consensus 206 -~M~~~v~vv~ 215 (227)
T 1v54_B 206 -FMPIVLELVP 215 (227)
T ss_dssp -GCCEEEEEEC
T ss_pred -cCeEEEEEEc
Confidence 2666666654
No 162
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=33.63 E-value=35 Score=27.57 Aligned_cols=35 Identities=14% Similarity=0.089 Sum_probs=28.2
Q ss_pred EEEEEcceeeeEEEecCchhhhcCCceecE-EEeCCC
Q 009960 60 YVFQVKDQIGSFFYFPSINFQKAGGGFGPI-RVNNRI 95 (521)
Q Consensus 60 y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l-iV~~~~ 95 (521)
..+++ +.+|++||-|-...+=..||..+| .|....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 45666 569999999998888889999999 887643
No 163
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=30.10 E-value=70 Score=26.68 Aligned_cols=34 Identities=24% Similarity=0.171 Sum_probs=29.3
Q ss_pred EEEe-cCCeeeEEeecchhhhhccceEEEEEeCCC
Q 009960 444 YAFL-DNPGMWNLRSQLLQNWFLGQELYIRVHNSD 477 (521)
Q Consensus 444 rf~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (521)
+|.. +.+|.+-|=|=...|...||-+.++|....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~ 110 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAAN 110 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCC
Confidence 3555 789999999999999999999999998654
No 164
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=29.52 E-value=50 Score=25.98 Aligned_cols=51 Identities=18% Similarity=0.027 Sum_probs=34.1
Q ss_pred EEEEEEEECCCCC---eeEEecCcCCCCCCCCCCCccc-CcccCCCCceEEEEEE-cceeee
Q 009960 14 FVHVNVFNNLDEP---LLFTWNGIQQRLNSWQDGVSGT-NCPILPRKNWTYVFQV-KDQIGS 70 (521)
Q Consensus 14 ~v~v~~~N~l~~~---~~iH~HG~~~~~~~~~DG~~~~-q~~i~pG~~~~y~f~~-~~~~Gt 70 (521)
.+.|.|+|-|+.+ ..++.-|.-. ..+ --. ...|.||++..+++.+ |..+|.
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL-----~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGL-----QRP-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTT-----EEE-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEECCCCCcccCEEEEEECCCC-----Ccc-eEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 6789999999764 4667766422 122 111 3569999999999987 345664
No 165
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=28.64 E-value=1.5e+02 Score=22.24 Aligned_cols=45 Identities=13% Similarity=0.189 Sum_probs=34.2
Q ss_pred eeEEEEecCCcccceeeeeEEecCCcEEEEEEEeCCCCcceEEEe
Q 009960 189 KMVLVETEGSYTNQITLRSLDVHVGQSYSVLVTADQNEADYYIVA 233 (521)
Q Consensus 189 ~~~via~DG~~~~p~~~d~v~l~pGeR~dv~v~~~~~~g~~~i~~ 233 (521)
.++|+..||.|++...++-=.+.-+|-|.+.....+..|.+.+.+
T Consensus 4 ~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~ 48 (82)
T 3e8v_A 4 SVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTA 48 (82)
T ss_dssp EEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEEC
T ss_pred EEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEEE
Confidence 578889999998877776666666888888887766677776665
No 166
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=27.88 E-value=62 Score=25.76 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=28.4
Q ss_pred EEEecCCeeeEEeecchhhhhccceEEEEEeCC
Q 009960 444 YAFLDNPGMWNLRSQLLQNWFLGQELYIRVHNS 476 (521)
Q Consensus 444 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 476 (521)
+|..+.+|..-|=|=...|-..||-+.+.|...
T Consensus 73 ~v~L~~~G~~yFic~~~gHC~~GmKl~I~V~~~ 105 (109)
T 1ws8_A 73 SIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPG 105 (109)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEECC-
T ss_pred EEEECCCcCEEEECCCCCcccCCCEEEEEEcCC
Confidence 466788999999999999999999999998643
No 167
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=27.43 E-value=1.4e+02 Score=25.96 Aligned_cols=85 Identities=12% Similarity=-0.006 Sum_probs=48.3
Q ss_pred CeEEEcCcCCCCCCCCCCCceEEEecCcEEEEEEEecCccceeeEEEcCceeEEEEecCCcccceee----eeE--E-ec
Q 009960 139 DVILMNGKGPFGYQMTREPESFTVTKGMTYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYTNQITL----RSL--D-VH 211 (521)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~----d~v--~-l~ 211 (521)
+..++|..+. +.-.+..|+.++||+-=......-.+.+ -|.+-..+|..+-.... ..+ . +.
T Consensus 52 ~v~l~d~~G~---------~~~~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~ 119 (188)
T 2r5o_A 52 DYHIQSAGVD---------FPPSLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVS 119 (188)
T ss_dssp EEEEEETTEE---------SCSSEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEEC
T ss_pred EEEEEECCCC---------EeeEEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccC
Confidence 3455665544 3345789999877776544332212221 35566667776632111 112 3 68
Q ss_pred CCcEEEEEEEeC--CCCcceEEEecc
Q 009960 212 VGQSYSVLVTAD--QNEADYYIVASP 235 (521)
Q Consensus 212 pGeR~dv~v~~~--~~~g~~~i~~~~ 235 (521)
+|+.+.+.+.++ =.+|+|.|.+.-
T Consensus 120 ~G~~~~v~f~f~l~L~~G~Y~lsv~i 145 (188)
T 2r5o_A 120 RGDVRVFKFSLPVDLNSGDYLLSFGI 145 (188)
T ss_dssp TTCEEEEEEEEECCBCSEEEEEEEEE
T ss_pred CCCEEEEEEEEecccCCCeEEEEEEE
Confidence 899766655544 258999998764
No 168
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=26.63 E-value=1.1e+02 Score=29.69 Aligned_cols=16 Identities=25% Similarity=0.387 Sum_probs=14.6
Q ss_pred CcccCCCCceEEEEEE
Q 009960 49 NCPILPRKNWTYVFQV 64 (521)
Q Consensus 49 q~~i~pG~~~~y~f~~ 64 (521)
..||+|||+.+.+.++
T Consensus 319 ~~pI~PGETr~~~v~a 334 (382)
T 1yew_A 319 NSPLAPGETRTVDVTA 334 (382)
T ss_dssp CSCBCTTCEEEEEEEE
T ss_pred CCCcCCCceeEEEEEe
Confidence 6789999999999887
No 169
>2yev_B Cytochrome C oxidase subunit 2; electron transport; HET: FME 5PL HAS 4AG 7E8 HEC 7E9; 2.36A {Thermus thermophilus}
Probab=32.05 E-value=14 Score=36.10 Aligned_cols=77 Identities=18% Similarity=0.093 Sum_probs=52.6
Q ss_pred EEecCCCcEEEEEEEcCCCCccceeecCcceEEEeeccccCCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEecCCeee
Q 009960 374 VVTGNHKGWIELVFNNNLDVIDSWHLDGFGFHVVGFGIGEWAPESRSTYNLFDPVVRSTVQVYPGGWTAVYAFLDNPGMW 453 (521)
Q Consensus 374 ~~~~~~g~~v~~vi~N~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~n~~~p~~rDTv~vp~~g~v~irf~adnpG~w 453 (521)
.+.++.|+.|++.+++.+- . |.|+|-+.+. ..|. -||....+.|.++.||.|
T Consensus 142 ~l~~P~~~~v~~~~ts~DV-i-------Hsf~vp~~~~-----------------k~d~---~PG~~~~~~~~~~~~G~y 193 (337)
T 2yev_B 142 ELVLPAGVPVELEITSKDV-I-------HSFWVPGLAG-----------------KRDA---IPGQTTRISFEPKEPGLY 193 (337)
Confidence 4678999999998887643 2 3566655432 2343 357777889999999999
Q ss_pred EEeecchhhh-hccceEEEEEeCCCC
Q 009960 454 NLRSQLLQNW-FLGQELYIRVHNSDP 478 (521)
Q Consensus 454 ~~HCHil~H~-d~GMm~~~~V~~~~~ 478 (521)
...|--+--. +..|...+.+..+++
T Consensus 194 ~g~c~e~cG~~Hs~M~~~v~~vs~~~ 219 (337)
T 2yev_B 194 YGFCAELCGASHARMLFRVVVLPKEE 219 (337)
Confidence 9999866444 455555666655543
No 170
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=25.33 E-value=1.2e+02 Score=29.83 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=29.2
Q ss_pred EEEEEEEECCCCCe--------eEEecCcCCCC--CCC------CCCCccc-CcccCCCCceEEEEEE
Q 009960 14 FVHVNVFNNLDEPL--------LFTWNGIQQRL--NSW------QDGVSGT-NCPILPRKNWTYVFQV 64 (521)
Q Consensus 14 ~v~v~~~N~l~~~~--------~iH~HG~~~~~--~~~------~DG~~~~-q~~i~pG~~~~y~f~~ 64 (521)
++.++++|+.+++. +++|-.-.+.. +.+ .+|.- . . ||+|||+.+.+.++
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a 366 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKI 366 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEE
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEe
Confidence 34678899987664 33443221100 001 12433 4 5 99999999999887
No 171
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=23.72 E-value=2.8e+02 Score=22.07 Aligned_cols=66 Identities=8% Similarity=0.032 Sum_probs=38.0
Q ss_pred CCeEEEecCCEEEEEEEECCCCCeeEEecCcCCCCCCCCCCCcc----c-----CcccCCCCceEEEEEEcceeee
Q 009960 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSG----T-----NCPILPRKNWTYVFQVKDQIGS 70 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~----~-----q~~i~pG~~~~y~f~~~~~~Gt 70 (521)
|-+|.++.||++.|.|.-+-....+-......-...-..+|.-. . ...+..|+...+.|++ .++|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSS
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCce
Confidence 56899999999999999765554444444311000001222111 0 1225567888888886 55674
No 172
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=21.89 E-value=2.6e+02 Score=22.41 Aligned_cols=30 Identities=10% Similarity=0.124 Sum_probs=21.6
Q ss_pred CCeEEEecCCEEEEEEEECCCCCeeEEecC
Q 009960 4 GPLINSTTNDFVHVNVFNNLDEPLLFTWNG 33 (521)
Q Consensus 4 GP~i~v~~Gd~v~v~~~N~l~~~~~iH~HG 33 (521)
|-+|.++.||++.|.|.-+-....+-...+
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPtTGY~W~~~~ 41 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPTTGYTWLRSG 41 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCeEEEEec
Confidence 457999999999999986654444444433
No 173
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=21.55 E-value=1.3e+02 Score=24.68 Aligned_cols=51 Identities=14% Similarity=0.328 Sum_probs=28.7
Q ss_pred EEEEEEEecCccceeeEEEcCceeEEEEecCCcc--c--ceeeeeEEecCCcEEEEEE
Q 009960 167 TYRFRISNVGSVFSFNFRIQNHKMVLVETEGSYT--N--QITLRSLDVHVGQSYSVLV 220 (521)
Q Consensus 167 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~--~--p~~~d~v~l~pGeR~dv~v 220 (521)
.|++||-|.+.. ...|-...+.+...||..- + .+.-..=.|.|||.++.-=
T Consensus 31 aY~I~I~N~~~~---~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 85 (126)
T 1xvs_A 31 AYLITIKNLSSQ---TVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSS 85 (126)
T ss_dssp EEEEEEEECSSS---CEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEE
T ss_pred EEEEEEEECCCC---CEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeC
Confidence 478999998864 3355555555555555431 1 1111223788888665543
No 174
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=21.27 E-value=1.7e+02 Score=23.49 Aligned_cols=54 Identities=15% Similarity=0.075 Sum_probs=36.4
Q ss_pred EEecCC--EEEEEEEECCCCCeeEEecCcCCCCCCCCCCCccc--CcccCCCCceEEEEEE
Q 009960 8 NSTTND--FVHVNVFNNLDEPLLFTWNGIQQRLNSWQDGVSGT--NCPILPRKNWTYVFQV 64 (521)
Q Consensus 8 ~v~~Gd--~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG~~~~--q~~i~pG~~~~y~f~~ 64 (521)
-+.+|+ .|.++|.|.|.+...+...=. .....++.+.. ..-|.++++.+|.|.+
T Consensus 17 sv~rgE~~~~~~~V~nyl~~~~~v~v~L~---~s~~~~~~~~~~~t~Clc~~~~~t~~W~i 74 (118)
T 3es6_B 17 SVRPNDEVTAVLAVQTELKECMVVKTYLI---SSIPLQGAFNYKYTACLCDDNPKTFYWDF 74 (118)
T ss_dssp EECSSCCEEEEEEEEECCSSCEEEEEEEE---ESSCCCSGGGCEEEEEECSSSCEEEEEEE
T ss_pred eEecCCEEEEEEEEEecccceEEEEEEec---CCcCEEccCCCcccEEecCCCceEEEEEE
Confidence 366777 456678999988766655422 23456666653 2238889999999987
Done!