BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009965
(521 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 100/192 (52%), Gaps = 15/192 (7%)
Query: 334 KDHIYI-----DSEI-LKDVVRFSRQELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEI 385
+DH + D E+ L + RFS +EL+VA ++FSN I+G VYKG + G +
Sbjct: 6 QDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLV 65
Query: 386 AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNG 445
AV L KEE G EL FQ EV ++ H N +L G+C +P R+LV+ Y +NG
Sbjct: 66 AVKRL--KEERXQGG-ELQFQTEVEMISMAVHRNLLRLRGFC--MTPTERLLVYPYMANG 120
Query: 446 TLYEHLHYGERCQ--VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503
++ L Q + W +R +I +G ARGL YLH P ++ ++ + L E+F
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 504 PKVSPLCLSFLL 515
V L+ L+
Sbjct: 181 AVVGDFGLAKLM 192
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 10/181 (5%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDF--SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + RFS +EL+VA ++F NI+G VYKG + G +AV L KEE
Sbjct: 9 DPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL--KEER 66
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER 456
G EL FQ EV ++ H N +L G+C +P R+LV+ Y +NG++ L
Sbjct: 67 TQGG-ELQFQTEVEMISMAVHRNLLRLRGFC--MTPTERLLVYPYMANGSVASCLRERPE 123
Query: 457 CQ--VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFL 514
Q + W +R +I +G ARGL YLH P ++ ++ + L E+F V L+ L
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Query: 515 L 515
+
Sbjct: 184 M 184
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 354 ELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
+LE A +F + +IG VYKG ++ G ++A+ E G E + E
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT--PESSQGIEEFETEIETLS 90
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVI 469
R H + L+G+C E + +L++ Y NG L HL+ + +SW +R++I I
Sbjct: 91 FCR--HPHLVSLIGFCDERNEM--ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
G ARGL YLHT ++ S + L E+F PK++ +S
Sbjct: 147 GAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 354 ELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
+LE A +F + +IG VYKG ++ G ++A+ E G E + E
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT--PESSQGIEEFETEIETLS 90
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVI 469
R H + L+G+C E + +L++ Y NG L HL+ + +SW +R++I I
Sbjct: 91 FCR--HPHLVSLIGFCDERNEM--ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
G ARGL YLHT ++ S + L E+F PK++ +S
Sbjct: 147 GAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 382 GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441
G ++AV L ++ H E F REVA + R+ H N +G + P +V +Y
Sbjct: 60 GSDVAVKILMEQDFHAERVNE--FLREVAIMKRLRHPNIVLFMGAV--TQPPNLSIVTEY 115
Query: 442 ASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500
S G+LY LH G R Q+ RR+ + +A+G+ YLH PP +L S + + +
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDK 174
Query: 501 DFSPKVSPLCLSFLLVSSII 520
++ KV LS L S +
Sbjct: 175 KYTVKVCDFGLSRLKASXFL 194
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 382 GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441
G ++AV L ++ H E F REVA + R+ H N +G + P +V +Y
Sbjct: 60 GSDVAVKILMEQDFHAERVNE--FLREVAIMKRLRHPNIVLFMGAV--TQPPNLSIVTEY 115
Query: 442 ASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500
S G+LY LH G R Q+ RR+ + +A+G+ YLH PP L S + + +
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDK 174
Query: 501 DFSPKVSPLCLSFLLVSSII 520
++ KV LS L S+ +
Sbjct: 175 KYTVKVCDFGLSRLKASTFL 194
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
++KG +G +I V L +++ W+ F E L +H N +LG C+
Sbjct: 26 LWKGRWQGN-DIVVKVLKVRD--WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
L+ + G+LY LH G V ++ +K + +ARG+ +LHT L P LNS
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNS 141
Query: 494 SAVYLTEDFSPKVSPLCLSF 513
+V + ED + ++S + F
Sbjct: 142 RSVMIDEDMTARISMADVKF 161
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
++KG +G +I V L +++ W+ F E L +H N +LG C+
Sbjct: 26 LWKGRWQGN-DIVVKVLKVRD--WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
L+ + G+LY LH G V ++ +K + ARG +LHT L P LNS
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNS 141
Query: 494 SAVYLTEDFSPKVSPLCLSFLLVS 517
+V + ED + ++S + F S
Sbjct: 142 RSVXIDEDXTARISXADVKFSFQS 165
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 350 FSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL 401
FS EL+ +F N +G +VYKG + +AV L + T L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 402 ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERC-QVS 460
+ F +E+ +A+ HEN +LLG+ + LV+ Y NG+L + L + +S
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLS 125
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
W R KI G A G+ +LH ++ S+ + L E F+ K+S L+
Sbjct: 126 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 174
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 350 FSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL 401
FS EL+ +F N +G +VYKG + +AV L + T L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 402 ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERC-QVS 460
+ F +E+ +A+ HEN +LLG+ + LV+ Y NG+L + L + +S
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
W R KI G A G+ +LH ++ S+ + L E F+ K+S L+
Sbjct: 132 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 350 FSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL 401
FS EL+ +F N +G +VYKG + +AV L + T L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 402 ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERC-QVS 460
+ F +E+ +A+ HEN +LLG+ + LV+ Y NG+L + L + +S
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
W R KI G A G+ +LH ++ S+ + L E F+ K+S L+
Sbjct: 132 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 15/172 (8%)
Query: 350 FSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL 401
FS EL+ +F N G +VYKG + +AV L + T L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 402 ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERC-QVS 460
+ F +E+ A+ HEN +LLG+ + LV+ Y NG+L + L + +S
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLC--LVYVYXPNGSLLDRLSCLDGTPPLS 122
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
W R KI G A G+ +LH ++ S+ + L E F+ K+S L+
Sbjct: 123 WHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 171
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 361 DFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKE-EHWTGYLELY--FQREVADLARIN 416
++ IG LV+KG + K +A+ SL + + E T +E + FQREV ++ +N
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KL G +V ++ G LY L + + W+ ++++++ IA G++
Sbjct: 82 HPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 477 YLHTELGPPFTISELNSSAVYL 498
Y+ + PP +L S ++L
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFL 157
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
G N ++G IP E+G+L GL ++L SN L GR+P + L L E+ L N L G +P
Sbjct: 664 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
N TG IPP + N + LV ++L N L+G +P+ LG+L L +L L N L+G +P
Sbjct: 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ-- 460
Query: 187 NSGYTANIHGMYASSANLT-----GLCHLSQLKVADFSYNFFVGSIPK--------CLEY 233
Y + + +LT GL + + L S N G IPK +
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520
Query: 234 LPSTSFQGN 242
L + SF GN
Sbjct: 521 LSNNSFSGN 529
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
N L+G IP EIG++ L +NL N ++G +P E+G+L L L L N+L G +P
Sbjct: 642 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ--- 698
Query: 188 SGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC--LEYLPSTSFQGN 242
+ L+ L D S N G IP+ E P F N
Sbjct: 699 ------------------AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 737
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
N+LTG IP IG L L + L +N +G +PAELG+ SL L L+ N G +PA
Sbjct: 499 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+NQ GPIPP L L ++L N TG +P L G +L L L N GAVP
Sbjct: 256 SNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 313
Query: 186 SNSGYTANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIPKCLEY------ 233
G + + + SS N +G L + LKV D S+N F G +P+ L
Sbjct: 314 F--GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 371
Query: 234 ---LPSTSFQGNCLQN--KDPKQ 251
L S +F G L N ++PK
Sbjct: 372 TLDLSSNNFSGPILPNLCQNPKN 394
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 127 TNQLTGPIPPEI--GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
+N +GPI P + L ++ LQ+NG TG++P L N L LHL N L G +P+
Sbjct: 377 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 436
Query: 185 GSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYL 234
L LS+L+ N G IP+ L Y+
Sbjct: 437 ---------------------SLGSLSKLRDLKLWLNMLEGEIPQELMYV 465
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 41/142 (28%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL------------------------ 162
N +G IP E+G+ L+ ++L +N G +PA +
Sbjct: 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 582
Query: 163 --------GNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQL 213
GNL+ + + ++ NRL P T+ ++G + S + +
Sbjct: 583 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPC----NITSRVYGGHTSPT----FDNNGSM 634
Query: 214 KVADFSYNFFVGSIPKCLEYLP 235
D SYN G IPK + +P
Sbjct: 635 MFLDMSYNMLSGYIPKEIGSMP 656
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
N G +PP G+ + L + L SN +G LP + L + L+ L L N G +P S
Sbjct: 304 NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE-S 362
Query: 187 NSGYTANIHGMYASSANLTG-----LCH--LSQLKVADFSYNFFVGSIPKCL 231
+ +A++ + SS N +G LC + L+ N F G IP L
Sbjct: 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 361 DFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKE-EHWTGYLELY--FQREVADLARIN 416
++ IG LV+KG + K +A+ SL + + E T +E + FQREV ++ +N
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KL G +V ++ G LY L + + W+ ++++++ IA G++
Sbjct: 82 HPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 477 YLHTELGPPFTISELNSSAVYL 498
Y+ + PP +L S ++L
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFL 157
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
G N ++G IP E+G+L GL ++L SN L GR+P + L L E+ L N L G +P
Sbjct: 661 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
N TG IPP + N + LV ++L N L+G +P+ LG+L L +L L N L+G +P
Sbjct: 400 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP--Q 457
Query: 187 NSGYTANIHGMYASSANLT-----GLCHLSQLKVADFSYNFFVGSIPK--------CLEY 233
Y + + +LT GL + + L S N G IPK +
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 517
Query: 234 LPSTSFQGN 242
L + SF GN
Sbjct: 518 LSNNSFSGN 526
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
N L+G IP EIG++ L +NL N ++G +P E+G+L L L L N+L G +P
Sbjct: 639 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ--- 695
Query: 188 SGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC--LEYLPSTSFQGN 242
+ L+ L D S N G IP+ E P F N
Sbjct: 696 ------------------AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 734
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
N+LTG IP IG L L + L +N +G +PAELG+ SL L L+ N G +PA
Sbjct: 496 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 553
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+NQ GPIPP L L ++L N TG +P L G +L L L N GAVP
Sbjct: 253 SNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 310
Query: 186 SNSGYTANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIPKCLEY------ 233
G + + + SS N +G L + LKV D S+N F G +P+ L
Sbjct: 311 F--GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 368
Query: 234 ---LPSTSFQGNCLQN--KDPKQ 251
L S +F G L N ++PK
Sbjct: 369 TLDLSSNNFSGPILPNLCQNPKN 391
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 127 TNQLTGPIPPEI--GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
+N +GPI P + L ++ LQ+NG TG++P L N L LHL N L G +P+
Sbjct: 374 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 433
Query: 185 GSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYL 234
L LS+L+ N G IP+ L Y+
Sbjct: 434 ---------------------SLGSLSKLRDLKLWLNMLEGEIPQELMYV 462
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 41/142 (28%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL------------------------ 162
N +G IP E+G+ L+ ++L +N G +PA +
Sbjct: 520 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 579
Query: 163 --------GNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQL 213
GNL+ + + ++ NRL P T+ ++G + S + +
Sbjct: 580 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPC----NITSRVYGGHTSPT----FDNNGSM 631
Query: 214 KVADFSYNFFVGSIPKCLEYLP 235
D SYN G IPK + +P
Sbjct: 632 MFLDMSYNMLSGYIPKEIGSMP 653
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
N G +PP G+ + L + L SN +G LP + L + L+ L L N G +P S
Sbjct: 301 NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE-S 359
Query: 187 NSGYTANIHGMYASSANLTG-----LCH--LSQLKVADFSYNFFVGSIPKCL 231
+ +A++ + SS N +G LC + L+ N F G IP L
Sbjct: 360 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 411
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 361 DFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKE-EHWTGYLELY--FQREVADLARIN 416
++ IG LV+KG + K +A+ SL + + E T +E + FQREV ++ +N
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KL G +V ++ G LY L + + W+ ++++++ IA G++
Sbjct: 82 HPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 477 YLHTELGPPFTISELNSSAVYL 498
Y+ + PP +L S ++L
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFL 157
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 337 IYIDSEILKD---VVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLC 391
I+ID +D VR +E++++C +IG+ V G +K G EI V
Sbjct: 9 IFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKT 68
Query: 392 IKEEHWTGYLELY---FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLY 448
+K +GY E F E + + + +H N L G +S+P M++ ++ NG+L
Sbjct: 69 LK----SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV--MIITEFMENGSLD 122
Query: 449 EHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
L + Q + + + ++ GIA G+KYL
Sbjct: 123 SFLRQND-GQFTVIQLVGMLRGIAAGMKYL 151
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I ARG+ YLH +
Sbjct: 88 Y---STKPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---S 140
Query: 486 FTISELNSSAVYLTEDFSPKVSPLCLS 512
+L S+ ++L ED + K+ L+
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G + ++++ T F+ EV L + H N +G
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAP----TPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I ARG+ YLH +
Sbjct: 76 Y---STKPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---S 128
Query: 486 FTISELNSSAVYLTEDFSPKVSPLCLS 512
+L S+ ++L ED + K+ L+
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G + ++++ T F+ EV L + H N +G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAP----TPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I ARG+ YLH +
Sbjct: 88 Y---STAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---S 140
Query: 486 FTISELNSSAVYLTEDFSPKVSPLCLS 512
+L S+ ++L ED + K+ L+
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLL 424
+IG VYKG++ P + +K + ++ + + + H+N + +
Sbjct: 20 LIGRGRYGAVYKGSLDERP------VAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 425 GYCRESSPFTRM---LVFDYASNGTL--YEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ RM LV +Y NG+L Y LH + W ++ + RGL YLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLH 128
Query: 480 TEL------GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
TEL P + +LNS V + D + +S LS L
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 347 VVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLE- 402
V++F+ E+ +C +IG+ VYKG +K G E+ V +K GY E
Sbjct: 34 VLKFT-TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK----AGYTEK 88
Query: 403 --LYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVS 460
+ F E + + +H N +L G + P M++ +Y NG L + L + + S
Sbjct: 89 QRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM--MIITEYMENGALDKFLREKD-GEFS 145
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
+ + ++ GIA G+KYL + +L + + + + KVS LS +L
Sbjct: 146 VLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 13/160 (8%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCI-KEEHWTGYLELYFQREVADL 412
E+E + S IGS VYKG G + ++ + E + F+ EVA L
Sbjct: 32 EIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQA-----FRNEVAVL 86
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
+ H N +GY + + +V + +LY+HLH E + + + I A
Sbjct: 87 RKTRHVNILLFMGYMTKDN---LAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTA 142
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
+G+ YLH + ++ S+ ++L E + K+ L+
Sbjct: 143 QGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 25/105 (23%)
Query: 126 GTNQLTGPIPPEIGNLT------------------------GLVKINLQSNGLTGRLPAE 161
G N L GPIPP I LT LV ++ N L+G LP
Sbjct: 85 GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144
Query: 162 LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+ +L +L + D NR+ GA+P S ++ M S LTG
Sbjct: 145 ISSLPNLVGITFDGNRISGAIPDSYGS-FSKLFTSMTISRNRLTG 188
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 22/145 (15%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
N+LTG IPP NL L ++L N L G G+ + +++HL +N L A G
Sbjct: 184 NRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL--AFDLGK- 239
Query: 188 SGYTANIHGMYASSANL-----TGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGN 242
G + N++G+ + + GL L L + S+N G IP QG
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-----------QGG 288
Query: 243 CLQNKDPKQRATT--LCGGAPPART 265
LQ D A LCG PA T
Sbjct: 289 NLQRFDVSAYANNKCLCGSPLPACT 313
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 158 LPAELGNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLS 211
+P+ L NL L L++ N L G +P +H +Y + N++G L +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAI--AKLTQLHYLYITHTNVSGAIPDFLSQIK 125
Query: 212 QLKVADFSYNFFVGSIPKCLEYLPS---TSFQGN 242
L DFSYN G++P + LP+ +F GN
Sbjct: 126 TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 353 QELEVACEDFSNIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREV 409
+E+ ++ F +G VYKG + G G + +++ ++ G L F+ E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
AR+ H N LLG + P + ++F Y S+G L+E L
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLS--MIFSYCSHGDLHEFL 120
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 353 QELEVACEDFSNIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREV 409
+E+ ++ F +G VYKG + G G + +++ ++ G L F+ E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
AR+ H N LLG + P + ++F Y S+G L+E L
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLS--MIFSYCSHGDLHEFL 103
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +VS
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
+ + I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 112 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 159
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKED--TMEVE-EFLKEA 60
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +VS + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKED--TMEVE-EFLKEA 60
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +VS + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ-VSWTR 463
F E+ L+R+NH N KL G C LV +YA G+LY LH E +
Sbjct: 49 FIVELRQLSRVNHPNIVKLYGACLNPV----CLVMEYAEGGSLYNVLHGAEPLPYYTAAH 104
Query: 464 RMKIVIGIARGLKYLHT 480
M + ++G+ YLH+
Sbjct: 105 AMSWCLQCSQGVAYLHS 121
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 22/157 (14%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V++G +G E+AV +EE + + E+ + HEN +LG
Sbjct: 37 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHEN---ILG 87
Query: 426 YC----RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHM 144
Query: 481 EL-----GPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
E+ P +L S + + ++ + ++ L L+
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 22/157 (14%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V++G +G E+AV +EE + + E+ + HEN +LG
Sbjct: 14 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHEN---ILG 64
Query: 426 YC----RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHM 121
Query: 481 EL-----GPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
E+ P +L S + + ++ + ++ L L+
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 22/157 (14%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V++G +G E+AV +EE + + E+ + HEN +LG
Sbjct: 17 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHEN---ILG 67
Query: 426 YC----RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHM 124
Query: 481 EL-----GPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
E+ P +L S + + ++ + ++ L L+
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ-VSWTR 463
F E+ L+R+NH N KL G C LV +YA G+LY LH E +
Sbjct: 48 FIVELRQLSRVNHPNIVKLYGACLNPV----CLVMEYAEGGSLYNVLHGAEPLPYYTAAH 103
Query: 464 RMKIVIGIARGLKYLHT 480
M + ++G+ YLH+
Sbjct: 104 AMSWCLQCSQGVAYLHS 120
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLL 424
IG V++G +G E+AV +EE + + E+ + HEN G +
Sbjct: 12 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHENILGFIA 65
Query: 425 GYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL- 482
+++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH E+
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIV 122
Query: 483 ----GPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
P +L S + + ++ + ++ L L+
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLL 424
IG V++G +G E+AV +EE + + E+ + HEN G +
Sbjct: 11 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHENILGFIA 64
Query: 425 GYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL- 482
+++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH E+
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 483 ----GPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
P +L S + + ++ + ++ L L+
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 22/157 (14%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V++G +G E+AV +EE + + E+ + HEN +LG
Sbjct: 50 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHEN---ILG 100
Query: 426 YC----RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHM 157
Query: 481 EL-----GPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
E+ P +L S + + ++ + ++ L L+
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKED--TMEVE-EFLKEA 60
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +VS + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 65
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +VS + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 123
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +VS
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
+ + I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 112 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 159
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKED--TMEVE-EFLKEA 60
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +VS + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +VS
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
+ + I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 112 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 159
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 65
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 61
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 120 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 162
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVEE-FLKEA 267
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +VS + +
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516
I+ ++YL + F L + + E+ KV+ LS L+
Sbjct: 326 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 65
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF +V +Y G L ++L R +V+
Sbjct: 75 FLKEAAVMKEIKHPNLVQLLGVCTLEPPF--YIVTEYMPYGNLLDYLRECNREEVTAVVL 132
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
+ + I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 133 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLM 180
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 60
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKED--TMEVE-EFLKEA 62
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 163
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 387 VISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGT 446
++++ + +E + ++ FQRE A +A ++ N KLLG C P L+F+Y + G
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC--LLFEYMAYGD 136
Query: 447 LYEHLH 452
L E L
Sbjct: 137 LNEFLR 142
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 64
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 123 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 165
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKED--TMEVE-EFLKEA 62
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 163
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 65
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 62
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 163
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 60
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 65
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 61
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 120 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 162
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKED--TMEVE-EFLKEA 73
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
I+ ++YL + F +L + + E+ KV+ LS L+
Sbjct: 132 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 174
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY +S TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDS---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 121 LSYCHSK 127
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVEE-FLKEA 306
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516
I+ ++YL + F L + + E+ KV+ LS L+
Sbjct: 365 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 408
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVEE-FLKEA 264
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLV 516
I+ ++YL + F L + + E+ KV+ LS L+
Sbjct: 323 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 366
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 382 GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441
G ++AV SL K E ++ ++E+ L + HEN K G C E L+ ++
Sbjct: 50 GEQVAVKSL--KPESGGNHI-ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 106
Query: 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+G+L E+L + +++ +++K + I +G+ YL
Sbjct: 107 LPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYL 142
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 382 GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441
G ++AV SL K E ++ ++E+ L + HEN K G C E L+ ++
Sbjct: 38 GEQVAVKSL--KPESGGNHI-ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 94
Query: 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYL 478
+G+L E+L + +++ +++K + I +G+ YL
Sbjct: 95 LPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYL 130
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 92 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 146
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 147 LSYCHSK 153
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 92 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 146
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 147 LSYCHSK 153
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 121 LSYCHSK 127
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 121 LSYCHSK 127
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 123
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 124 LSYCHSK 130
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 70 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 124
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 125 LSYCHSK 131
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 121 LSYCHSK 127
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 67 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 121
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 122 LSYCHSK 128
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 123
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 124 LSYCHSK 130
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 123
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 124 LSYCHSK 130
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 123
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 124 LSYCHSK 130
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 121 LSYCHSK 127
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 121 LSYCHSK 127
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 68 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 122
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 123 LSYCHSK 129
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 65 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 119
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 120 LSYCHSK 126
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 71 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 125
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 126 LSYCHSK 132
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 121 LSYCHSK 127
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 71 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 125
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 126 LSYCHSK 132
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGERCQVSWTR 463
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ER + +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--IDHIK 118
Query: 464 RMKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 119 LLQYTSQICKGMEYLGTK 136
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 67 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 121
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 122 LSYCHSK 128
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 67 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 121
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 122 LSYCHSK 128
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 121 LSYCHSK 127
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 68 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 122
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 123 LSYCHSK 129
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 83 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 137
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 138 LSYCHSK 144
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 71 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 125
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 126 LSYCHSK 132
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 117 LQYTSQICKGMEYLGTK 133
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 123
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 124 LSYCHSK 130
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 147
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 148 LQYTSQICKGMEYLGTK 164
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 117 LQYTSQICKGMEYLGTK 133
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 56 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 114
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 115 LQYTSQICKGMEYLGTK 131
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 123
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 124 LSYCHSK 130
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 123
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 124 LQYTSQICKGMEYLGTK 140
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 122
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 123 LQYTSQICKGMEYLGTK 139
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 119
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 120 LQYTSQICKGMEYLGTK 136
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA G +Y+ L + + R + +A
Sbjct: 71 RHPNILRLYGYFHDA---TRVYLILEYAPRGEVYKELQ--KLSKFDEQRTATYITELANA 125
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 126 LSYCHSK 132
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 121
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 122 LQYTSQICKGMEYLGTK 138
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA G +Y+ L + + R + +A
Sbjct: 71 RHPNILRLYGYFHDA---TRVYLILEYAPRGEVYKELQ--KLSKFDEQRTATYITELANA 125
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 126 LSYCHSK 132
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 117
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 118 LQYTSQICKGMEYLGTK 134
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 120
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 121 LQYTSQICKGMEYLGTK 137
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 134
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 135 LQYTSQICKGMEYLGTK 151
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 18/110 (16%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ----VSW 461
++E A + H N L G C + LV ++A G L L G+R V+W
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLC--LVMEFARGGPLNRVLS-GKRIPPDILVNW 110
Query: 462 TRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-----DFSPKV 506
+ IARG+ YLH E P +L SS + + + D S K+
Sbjct: 111 A------VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKI 154
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 134
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 135 LQYTSQICKGMEYLGTK 151
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 57 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 115
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 116 LQYTSQICKGMEYLGTK 132
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 117 LQYTSQICKGMEYLGTK 133
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
FQRE L + HE+ K G C + P ++VF+Y +G L + L
Sbjct: 64 FQREAELLTNLQHEHIVKFYGVCGDGDPL--IMVFEYMKHGDLNKFL 108
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 63 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 117
Query: 475 LKYLHTE 481
L Y H++
Sbjct: 118 LSYCHSK 124
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ ++ G+L E+L + ++ +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKL 119
Query: 465 MKIVIGIARGLKYLHTE 481
++ I +G++YL T+
Sbjct: 120 LQYTSQICKGMEYLGTK 136
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
FQRE L + H++ + G C E P ++VF+Y +G L
Sbjct: 67 FQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRHGDL 107
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
FQRE L + H++ + G C E P ++VF+Y +G L
Sbjct: 61 FQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRHGDL 101
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
FQRE L + H++ + G C E P ++VF+Y +G L L
Sbjct: 90 FQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRHGDLNRFL 134
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 68/160 (42%), Gaps = 16/160 (10%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLL 424
IG V+ G +G + +E W + + E+ + HEN G +
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASW------FRETEIYQTVLMRHENILGFIA 98
Query: 425 GYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL- 482
+ + +T++ L+ DY NG+LY++L + + +K+ GL +LHTE+
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 483 ----GPPFTISELNSSAVYLTEDFSPKVSPLCLSFLLVSS 518
P +L S + + ++ + ++ L L+ +S
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD 195
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
F RE L + HE+ K G C E P ++VF+Y +G L + L
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPL--IMVFEYMKHGDLNKFL 106
>pdb|2Y50|A Chain A, Crystal Structure Of Collagenase G From Clostridium
Histolyticum At 2.80 Angstrom Resolution
pdb|2Y6I|A Chain A, Crystal Structure Of Collagenase G From Clostridium
Histolyticum In Complex With
Isoamylphosphonyl-Gly-Pro-Ala At 3.25 Angstrom
Resolution
Length = 785
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG--YTANIHGMY 198
LT L+K N++ N + G G+ ++ D+NR+Q + A SG YTAN
Sbjct: 37 LTNLIK-NIKWNQINGLFNYSTGS----QKFFGDKNRVQAIINALQESGRTYTAN----- 86
Query: 199 ASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244
++ G+ +++ A F++G L YL +FQ C+
Sbjct: 87 ----DMKGIETFTEVLRA----GFYLGYYNDGLSYLNDRNFQDKCI 124
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+QRE+ L + HE+ K G C + + LV +Y G+L ++L R V +
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQL 113
Query: 465 MKIVIGIARGLKYLHTE 481
+ I G+ YLH +
Sbjct: 114 LLFAQQICEGMAYLHAQ 130
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+QRE+ L + HE+ K G C + + LV +Y G+L ++L R V +
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQL 114
Query: 465 MKIVIGIARGLKYLHTE 481
+ I G+ YLH +
Sbjct: 115 LLFAQQICEGMAYLHAQ 131
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 6/132 (4%)
Query: 351 SRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVA 410
S+++ + D +G VY + I + + K + +E +REV
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 411 DLARINHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ + H N +L GY ++ TR+ L+ +YA GT+Y L R R +
Sbjct: 65 IQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSRFDEQ--RTATYIT 119
Query: 470 GIARGLKYLHTE 481
+A L Y H++
Sbjct: 120 ELANALSYCHSK 131
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 6/132 (4%)
Query: 351 SRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVA 410
S+++ + D +G VY + I + + K + +E +REV
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 411 DLARINHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ + H N +L GY ++ TR+ L+ +YA GT+Y L R R +
Sbjct: 65 IQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSRFDEQ--RTATYIT 119
Query: 470 GIARGLKYLHTE 481
+A L Y H++
Sbjct: 120 ELANALSYCHSK 131
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
VY K I + + K + +E +RE+ A ++H N +L Y +
Sbjct: 39 VYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRI 98
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
L+ +YA G LY+ L + C R I+ +A L Y H
Sbjct: 99 --YLILEYAPRGELYKELQ--KSCTFDEQRTATIMEELADALMYCH 140
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E + + ++ H N +LLG E +V +Y + G+L ++L R +
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 110
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
+K + + ++YL G F +L + V ++ED KVS L+
Sbjct: 111 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E + + ++ H N +LLG E +V +Y + G+L ++L R +
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 119
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
+K + + ++YL G F +L + V ++ED KVS L+
Sbjct: 120 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E + + ++ H N +LLG E +V +Y + G+L ++L R +
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 104
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
+K + + ++YL G F +L + V ++ED KVS L+
Sbjct: 105 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 9/143 (6%)
Query: 376 KGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435
K T + E+ V+ I+ + T + F +EV + + H N K +G +
Sbjct: 28 KVTHRETGEVMVMKELIRFDEET---QRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN- 83
Query: 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495
+ +Y GTL + + Q W++R+ IA G+ YLH+ +LNS
Sbjct: 84 -FITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHN 138
Query: 496 VYLTEDFSPKVSPLCLSFLLVSS 518
+ E+ + V+ L+ L+V
Sbjct: 139 CLVRENKNVVVADFGLARLMVDE 161
>pdb|2Y3U|A Chain A, Crystal Structure Of Apo Collagenase G From Clostridium
Histolyticum At 2.55 Angstrom Resolution
Length = 785
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 20/106 (18%)
Query: 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG--YTANIHGMY 198
LT L+K N++ N + G G+ ++ D+NR+Q + A SG YTAN
Sbjct: 37 LTNLIK-NIKWNQINGLFNYSTGS----QKFFGDKNRVQAIINALQESGRTYTAN----- 86
Query: 199 ASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244
+ G+ +++ A F++G L YL +FQ C+
Sbjct: 87 ----DXKGIETFTEVLRA----GFYLGYYNDGLSYLNDRNFQDKCI 124
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F IGS LV+ G ++A+ + IKE + E F E + +++H
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDKVAIKT--IKEGSMS---EDDFIEEAEVMMKLSHPKLV 85
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+L G C E +P LVF++ +G L ++L +R + + + + + G+ YL
Sbjct: 86 QLYGVCLEQAPIC--LVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE 140
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E + + ++ H N +LLG E +V +Y + G+L ++L R +
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 291
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
+K + + ++YL G F +L + V ++ED KVS L+
Sbjct: 292 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+++E+ L + HE+ K G C ++ + LV +Y G+L ++L R + +
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQL 136
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
+ I G+ YLH + + +L + V L D K+ L+
Sbjct: 137 LLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLA 181
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 12/115 (10%)
Query: 408 EVADLARINHENTGKLLGYCRE--SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRM 465
EV L + HEN + +G + S L+ + G+L + L VSW
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELC 124
Query: 466 KIVIGIARGLKYLHTEL-------GPPFTISELNSSAVYLTEDFSPKVSPLCLSF 513
I +ARGL YLH ++ P + ++ S V L + + ++ L+
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 19/114 (16%)
Query: 406 QREVADLARI-NHENTGKLLGYC-RE-SSPFTRMLVFDYASNGTLYEHL-------HYGE 455
QRE AD+ R+ NH N +L+ YC RE + L+ + GTL+ + ++
Sbjct: 74 QRE-ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLT 132
Query: 456 RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPL 509
Q+ W +++GI RGL+ +H + + +L + + L ++ P + L
Sbjct: 133 EDQILW-----LLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDL 178
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+RE+ +L H + KL Y S+P +V +Y S G L++++ R +RR
Sbjct: 63 IRREIQNLKLFRHPHIIKL--YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRR 120
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLSFLL 515
+ I G+ Y H + +L V L + K++ LS ++
Sbjct: 121 L--FQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 166
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F IGS LV+ G ++A+ + I+E E F E + +++H
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKT--IRE---GAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+L G C E +P LVF++ +G L ++L +R + + + + + G+ YL
Sbjct: 66 QLYGVCLEQAPIC--LVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE 120
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F IGS LV+ G ++A+ + I+E E F E + +++H
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKT--IRE---GAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+L G C E +P LVF++ +G L ++L +R + + + + + G+ YL
Sbjct: 64 QLYGVCLEQAPIC--LVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE 118
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F IGS LV+ G ++A+ + I+E E F E + +++H
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKT--IRE---GAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+L G C E +P LVF++ +G L ++L +R + + + + + G+ YL
Sbjct: 66 QLYGVCLEQAPIC--LVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE 120
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F IGS LV+ G ++A+ + I+E E F E + +++H
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKT--IRE---GAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+L G C E +P LVF++ +G L ++L +R + + + + + G+ YL
Sbjct: 69 QLYGVCLEQAPIC--LVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE 123
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
N LT +P EI NL+ L ++L N LT LPAELG+ L+ + N
Sbjct: 257 NSLTE-LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDN 303
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 144 LVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
L ++ L N LT LPAE+ NL +L L L NRL ++PA
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL-TSLPA 287
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+++E+ L + HE+ K G C + + LV +Y G+L ++L R + +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQL 119
Query: 465 MKIVIGIARGLKYLHTE 481
+ I G+ YLH++
Sbjct: 120 LLFAQQICEGMAYLHSQ 136
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
++E+ A +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 52 IKKEICINAMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRI 96
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 11/132 (8%)
Query: 353 QELEVACE--DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVA 410
QE ++ E + +IG VY G G I +I + E F+REV
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKA----FKREVM 81
Query: 411 DLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERC-QVSWTRRMKIVI 469
+ HEN +G C SP ++ TLY + + V+ TR +I
Sbjct: 82 AYRQTRHENVVLFMGAC--MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR--QIAQ 137
Query: 470 GIARGLKYLHTE 481
I +G+ YLH +
Sbjct: 138 EIVKGMGYLHAK 149
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+++E+ L + HE+ K G C + + LV +Y G+L ++L R + +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQL 119
Query: 465 MKIVIGIARGLKYLHTE 481
+ I G+ YLH +
Sbjct: 120 LLFAQQICEGMAYLHAQ 136
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPF---TRMLVFDYASNGTLYEHLHYGER----C 457
F E A + +H N +LLG C E S M++ + G L+ +L Y
Sbjct: 83 FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPK 142
Query: 458 QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKVSPLCLS 512
+ +K ++ IA G++YL F +L + L +D + V+ LS
Sbjct: 143 HIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLS 194
>pdb|3FOT|A Chain A, Structural And Functional Characterization Of Tri3
Trichothecene 15-O- Acetyltransferase From Fusarium
Sporotrichioides
pdb|3FP0|A Chain A, Structural And Functional Characterization Of Tri3
Trichothecene 15-O-Acetyltransferase From Fusarium
Sporotrichioides
Length = 519
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 433 FTRMLVFDYASNGTLYEHLHYGERC---QVSWTRRMKIVIGIARGLKYLHTELGPPFTIS 489
+T LV +Y S G ++ RC ++S + IV K + T LGP FTIS
Sbjct: 255 YTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIV-------KAVKTRLGPGFTIS 307
Query: 490 ELNSSAVYL 498
L +A+ L
Sbjct: 308 HLTQAAIVL 316
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLY 448
RE L ++NH+N KL E++ ++L+ ++ G+LY
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLY 97
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLY 448
RE L ++NH+N KL E++ ++L+ ++ G+LY
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLY 97
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V+ G ++ + + C E L+ F +E L + +H N +L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTE 481
C + P +V + G L G R +V +++V A G++YL ++
Sbjct: 180 VCTQKQPI--YIVMELVQGGDFLTFLRTEGARLRVKTL--LQMVGDAAAGMEYLESK 232
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 333 EKDHIYID-SEILKDVV-RFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISL 390
+ ++ Y+D E D+ F R+ LE S G ++ Y G K G I V
Sbjct: 23 DNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAY-GISKTGVSIQVAVK 81
Query: 391 CIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYE 449
+KE+ + E E+ + ++ +HEN LLG C S P L+F+Y G L
Sbjct: 82 MLKEKADSSEREA-LMSELKMMTQLGSHENIVNLLGACTLSGPI--YLIFEYCCYGDLLN 138
Query: 450 HLH 452
+L
Sbjct: 139 YLR 141
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V+ G ++ + + C E L+ F +E L + +H N +L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTE 481
C + P +V + G L G R +V +++V A G++YL ++
Sbjct: 180 VCTQKQPI--YIVMELVQGGDFLTFLRTEGARLRVKTL--LQMVGDAAAGMEYLESK 232
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 97
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 97
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 97
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 97
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 96
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 96
>pdb|3VLN|A Chain A, Human Glutathione Transferase O1-1 C32s Mutant In Complex
With Ascorbic Acid
Length = 241
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQ 406
+ +P ++ MK P ++ +L E+ W G+LELY Q
Sbjct: 193 VDHTPKLKLWMAAMKEDPTVS--ALLTSEKDWQGFLELYLQ 231
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 52 IKKEIXINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRI 96
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 96
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 96
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRI 95
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRI 95
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRI 95
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 97
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRI 95
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRI 96
>pdb|3LFL|A Chain A, Crystal Structure Of Human Glutathione Transferase Omega
1, Delta 155
pdb|3LFL|B Chain B, Crystal Structure Of Human Glutathione Transferase Omega
1, Delta 155
pdb|3LFL|C Chain C, Crystal Structure Of Human Glutathione Transferase Omega
1, Delta 155
Length = 240
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQ 406
+ +P ++ MK P ++ +L E+ W G+LELY Q
Sbjct: 192 VDHTPKLKLWMAAMKEDPTVS--ALLTSEKDWQGFLELYLQ 230
>pdb|1EEM|A Chain A, Glutathione Transferase From Homo Sapiens
Length = 241
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQ 406
+ +P ++ MK P ++ +L E+ W G+LELY Q
Sbjct: 193 VDHTPKLKLWMAAMKEDPTVS--ALLTSEKDWQGFLELYLQ 231
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 96
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 50 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 95
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL 451
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRI 95
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
L ++NH + KL G C + P +L+ +YA G+L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSL 113
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
L ++NH + KL G C + P +L+ +YA G+L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSL 113
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 96
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
L ++NH + KL G C + P +L+ +YA G+L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSL 113
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH 452
++E+ +NHEN K G+ RE + + L +Y S G L++ +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE 96
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185
L N +T P +LI+L+EL+L N+L GA+P G
Sbjct: 47 LHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVG 82
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,448,991
Number of Sequences: 62578
Number of extensions: 571022
Number of successful extensions: 1295
Number of sequences better than 100.0: 191
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 1185
Number of HSP's gapped (non-prelim): 216
length of query: 521
length of database: 14,973,337
effective HSP length: 103
effective length of query: 418
effective length of database: 8,527,803
effective search space: 3564621654
effective search space used: 3564621654
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)