BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009966
(521 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1QLV|B Chain B, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1EE0|A Chain A, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
pdb|1EE0|B Chain B, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
Length = 402
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 153/368 (41%), Gaps = 61/368 (16%)
Query: 149 KKVVERSGIGK--MSGGPKSLFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVKPRD- 205
K++ E++ I K ++ L +NP + MA ++ + ++V + L + VK D
Sbjct: 62 KRICEKTAIKKRYLALTEDYLQENPTMCEFMAPSLNARQDLVVTGVPMLGKEAAVKAIDE 121
Query: 206 -------IGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARR 258
I L+ ++ P +V L ++ Y L G +AG + LA+
Sbjct: 122 WGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYMLYQQGXAAGGTVLRLAKD 181
Query: 259 LLQVTPDSYALVVSTENITMNWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAK 315
L + S L+V +E + ++G N+ + L+ LF G AA+++ S R
Sbjct: 182 LAENNKGSRVLIVCSEITAILFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAVERPI 241
Query: 316 YELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLP 375
+E++ T +T ++ +A+K ++ G
Sbjct: 242 FEIVSTDQT-----------------------------ILPDTEKAMKLHLREGG----- 267
Query: 376 MSEQLLFSLTL-VARKIFKMKIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLN 430
++ QL + L VA+ I K P D+ F + +H GGRA+LD+VE+ L L
Sbjct: 268 LTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSVF--WMVHPGGRAILDQVERKLNLK 325
Query: 431 EWLMEPSRMTLYRFGNTSSSCLWY------ELAYFEAKGRIRKG-DRTWQIAFGSGFKCN 483
E + SR L +GN S+C+ + + + E K +G D FG G
Sbjct: 326 EDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVE 385
Query: 484 SAVWRALR 491
+ V R++R
Sbjct: 386 TVVLRSVR 393
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea
pdb|1Z1F|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea (Resveratrol-Bound Form)
Length = 390
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 55/276 (19%)
Query: 232 LRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSM--L 289
L ++ Y + GC AG + LA+ L + D+ L+V +EN ++ + G ++ M L
Sbjct: 151 LDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTSVTFRGPSETDMDSL 210
Query: 290 LTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDE------- 342
+ LF G AAI++ S + L + T + S+ + E
Sbjct: 211 VGQALFADGAAAIIIG--SDPVPEVENPLFEIVSTDQQLVPNSHGAIGGLLREVGLTFYL 268
Query: 343 SKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPD 402
+K + IS+++ +AL LG I D
Sbjct: 269 NKSVPDIISQNI----NDALSKAFDPLG-----------------------------ISD 295
Query: 403 FKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAK 462
+ F + H GGRA+LD+VE+ + L M+ +R L +GN SS+C+++ + K
Sbjct: 296 YNSIF--WIAHPGGRAILDQVEEKVNLKPEKMKATRDVLSNYGNMSSACVFFIMDLMRKK 353
Query: 463 GRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
+ G +T W + FG G + V R++
Sbjct: 354 S-LEAGLKTTGEGLDWGVLFGFGPGLTIETVVLRSM 388
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
pdb|1U0M|B Chain B, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
Length = 382
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 118/317 (37%), Gaps = 71/317 (22%)
Query: 182 KETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNL 241
+E K+ + I L + DI +++ S PSL+A ++N +
Sbjct: 82 REAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPI 141
Query: 242 GGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSM--LLTNCLFRLGG 299
+GC+AG +I+ A P++ AL+V+ E ++ Y D + LL N LF G
Sbjct: 142 AQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSL-CYQPTDLGVGSLLCNGLFGDGI 200
Query: 300 AAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAG 359
AA ++ R GV++ ++
Sbjct: 201 AAAVVRGRGG------------------------------------TGVRLERN------ 218
Query: 360 EALKTNITTLGPLVLPMSEQLLF------SLTLVARKIFKMKIKPYIPDFK-LAFEH--- 409
G ++P +E + + K ++P P K LA EH
Sbjct: 219 ----------GSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAPALKELAGEHGWD 268
Query: 410 ------FCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKG 463
+ +HAGG +LD++ L+++ SR TL +GN +S+ + L +G
Sbjct: 269 ASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEG 328
Query: 464 RIRKGDRTWQIAFGSGF 480
+ +G R FG G
Sbjct: 329 GVEEGARGLLAGFGPGI 345
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0V|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0W|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
Length = 393
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 135/338 (39%), Gaps = 60/338 (17%)
Query: 172 LDNKNMALAMKET---KAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVN 228
LD + LAM+ K V AI E G I L+V S+ P +
Sbjct: 95 LDARQAMLAMEVPRLGKEAAVKAIKEW----GQPKSKITHLIVCSTTTPDLPGADYQLTK 150
Query: 229 HYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSM 288
LR + + GC AG + LA+ L + + LVV +E + + G +D +
Sbjct: 151 LLGLRPYVKRVGVFQHGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHL 210
Query: 289 --LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKR 345
L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 211 DSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT--------------------- 249
Query: 346 IGVKISKDLM-AIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIP--- 401
I+ D AI G + +T +P +V++ I K ++ + P
Sbjct: 250 ----IAPDSEGAIDGHLREAGLTFHLKGAVP---------DIVSKNITKALVEAFEPLGI 296
Query: 402 -DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFE 460
D+ F + H GG A+LD+VE+ L L M +R L +GN SS+C+ + L
Sbjct: 297 SDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR 354
Query: 461 AKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
K + G +T W + FG G + V R++
Sbjct: 355 KK-STQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 391
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol
pdb|1CGK|A Chain A, Chalcone Synthase From Alfalfa Complexed With Naringenin
Length = 389
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 144/349 (41%), Gaps = 63/349 (18%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 77 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 136
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + GC AG + LA+ L + + LVV +E +
Sbjct: 137 MPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 196
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 197 TFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 245
Query: 336 VSQQEDESKRIGVKISKDLM-AIAGEALKTNITTLGPLVLPMSEQLLFSLT-LVARKIFK 393
I+ D AI G + +T LL + +V++ I K
Sbjct: 246 --------------IAPDSEGAIDGHLREAGLTF----------HLLKDVPGIVSKNITK 281
Query: 394 MKIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSS 449
++ + P D+ F + H GG A+LD+VE+ L L M +R L +GN SS
Sbjct: 282 ALVEAFEPLGISDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSS 339
Query: 450 SCLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
+C+ + L K + G +T W + FG G + V R++
Sbjct: 340 ACVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein
Length = 979
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 61/254 (24%)
Query: 245 GCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSM--LLTNCLFRLGGAAI 302
GC AG + A+ L + + LVV +E + + G ++ ++ L+ LF G AA+
Sbjct: 750 GCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAV 809
Query: 303 LL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEA 361
++ S+ R ++L+ +T I AIAG
Sbjct: 810 IVGSDPDISIERPLFQLVSAAQTF------------------------IPNSAGAIAG-- 843
Query: 362 LKTNITTLGPLVLPMSEQLLFSL-----TLVARKIFKMKIKPYIP----DFKLAFEHFCI 412
N+ +G L F L TL++ + K + + P D+ F +
Sbjct: 844 ---NLREVG---------LTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLF--WIA 889
Query: 413 HAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRT- 471
H GG A+LD VE L L++ +E +R L +GN SS+C+ + L E + + KG+R
Sbjct: 890 HPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILD--EMRKKSLKGERAT 947
Query: 472 ------WQIAFGSG 479
W + FG G
Sbjct: 948 TGEGLDWGVLFGFG 961
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa
pdb|1D6F|A Chain A, Chalcone Synthase C164a Mutant
Length = 389
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 143/349 (40%), Gaps = 63/349 (18%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 77 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 136
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + G AG + LA+ L + + LVV +E +
Sbjct: 137 MPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 196
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 197 TFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 245
Query: 336 VSQQEDESKRIGVKISKDLM-AIAGEALKTNITTLGPLVLPMSEQLLFSLT-LVARKIFK 393
I+ D AI G + +T LL + +V++ I K
Sbjct: 246 --------------IAPDSEGAIDGHLREAGLTF----------HLLKDVPGIVSKNITK 281
Query: 394 MKIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSS 449
++ + P D+ F + H GG A+LD+VE+ L L M +R L +GN SS
Sbjct: 282 ALVEAFEPLGISDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSS 339
Query: 450 SCLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
+C+ + L K + G +T W + FG G + V R++
Sbjct: 340 ACVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
pdb|1CHW|B Chain B, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
Length = 389
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 143/349 (40%), Gaps = 63/349 (18%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 77 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 136
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + G AG + LA+ L + + LVV +E +
Sbjct: 137 MPGADYQLTKLLGLRPYVKRYMMYQQGSFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 196
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 197 TFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 245
Query: 336 VSQQEDESKRIGVKISKDLM-AIAGEALKTNITTLGPLVLPMSEQLLFSLT-LVARKIFK 393
I+ D AI G + +T LL + +V++ I K
Sbjct: 246 --------------IAPDSEGAIDGHLREAGLTF----------HLLKDVPGIVSKNITK 281
Query: 394 MKIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSS 449
++ + P D+ F + H GG A+LD+VE+ L L M +R L +GN SS
Sbjct: 282 ALVEAFEPLGISDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSS 339
Query: 450 SCLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
+C+ + L K + G +T W + FG G + V R++
Sbjct: 340 ACVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A
Length = 388
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 143/349 (40%), Gaps = 63/349 (18%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 76 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 135
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + G AG + LA+ L + + LVV +E +
Sbjct: 136 MPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 195
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 196 TFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 244
Query: 336 VSQQEDESKRIGVKISKDLM-AIAGEALKTNITTLGPLVLPMSEQLLFSLT-LVARKIFK 393
I+ D AI G + +T LL + +V++ I K
Sbjct: 245 --------------IAPDSEGAIDGHLREAGLTF----------HLLKDVPGIVSKNITK 280
Query: 394 MKIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSS 449
++ + P D+ F + H GG A+LD+VE+ L L M +R L +GN SS
Sbjct: 281 ALVEAFEPLGISDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSS 338
Query: 450 SCLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
+C+ + L K + G +T W + FG G + V R++
Sbjct: 339 ACVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 386
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa
Length = 389
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 143/349 (40%), Gaps = 63/349 (18%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 77 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 136
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + G AG + LA+ L + + LVV +E +
Sbjct: 137 MPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 196
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 197 TFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 245
Query: 336 VSQQEDESKRIGVKISKDLM-AIAGEALKTNITTLGPLVLPMSEQLLFSLT-LVARKIFK 393
I+ D AI G + +T LL + +V++ I K
Sbjct: 246 --------------IAPDSEGAIDGHLREAGLTF----------HLLKDVPGIVSKNITK 281
Query: 394 MKIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSS 449
++ + P D+ F + H GG A+LD+VE+ L L M +R L +GN SS
Sbjct: 282 ALVEAFEPLGISDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSS 339
Query: 450 SCLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
+C+ + L K + G +T W + FG G + V R++
Sbjct: 340 ACVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant
Length = 389
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 61/348 (17%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 77 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 136
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + G AG + LA+ L + + LVV +E +
Sbjct: 137 MPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 196
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 197 TFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 245
Query: 336 VSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLT-LVARKIFKM 394
I+ D + A+ ++ G ++ LL + +V++ I K
Sbjct: 246 --------------IAPD----SEGAIDAHLREAG-----LTFHLLKDVPGIVSKNITKA 282
Query: 395 KIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSS 450
++ + P D+ F + H GG A+LD+VE+ L L M +R L +GN SS+
Sbjct: 283 LVEAFEPLGISDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSA 340
Query: 451 CLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
C+ + L K + G +T W + FG G + V R++
Sbjct: 341 CVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1I88|A Chain A, Chalcone Synthase (G256v)
pdb|1I88|B Chain B, Chalcone Synthase (G256v)
Length = 389
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 61/348 (17%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 77 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 136
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + G AG + LA+ L + + LVV +E +
Sbjct: 137 MPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 196
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 197 TFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 245
Query: 336 VSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLT-LVARKIFKM 394
I+ D + A+ ++ G ++ LL + +V++ I K
Sbjct: 246 --------------IAPD----SEGAIDVHLREAG-----LTFHLLKDVPGIVSKNITKA 282
Query: 395 KIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSS 450
++ + P D+ F + H GG A+LD+VE+ L L M +R L +GN SS+
Sbjct: 283 LVEAFEPLGISDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSA 340
Query: 451 CLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
C+ + L K + G +T W + FG G + V R++
Sbjct: 341 CVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|E Chain E, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|F Chain F, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
Length = 397
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 141/345 (40%), Gaps = 57/345 (16%)
Query: 131 FRMAAKNGYFTEESLAFQKKVVERSGIGK--MSGGPKSLFDNP----------LDNKNMA 178
FR+ N + TE F K++ ERS I + M + L NP LD +
Sbjct: 47 FRITG-NEHNTELKDKF-KRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAM 104
Query: 179 LAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS 238
LAM E + A ++ + + G I L+ S+ P V L ++
Sbjct: 105 LAM-EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKR 163
Query: 239 YNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSM--LLTNCLFR 296
+ GC AG + +A+ L + + LV+ +E + + G ++ + L+ LF
Sbjct: 164 VGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFG 223
Query: 297 LGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLM 355
G +A+++ ++ +A +E++ T +T V E
Sbjct: 224 DGASALIVGADPIPQVEKACFEIVWTAQT----------VVPNSEG-------------- 259
Query: 356 AIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPY----IPDFKLAFEHFC 411
AI G+ + +T +P L++ I ++ + I D+ F +
Sbjct: 260 AIGGKVREVGLTFQLKGAVP---------DLISANIENCMVEAFSQFKISDWNKLF--WV 308
Query: 412 IHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYEL 456
+H GGRA+LD VE L L+ + P+R + +GN SS+C+ + L
Sbjct: 309 VHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFIL 353
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|B Chain B, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|C Chain C, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|D Chain D, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
Length = 416
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 118/298 (39%), Gaps = 36/298 (12%)
Query: 205 DIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264
DI L+V ++ P + +V LR ++ L GC AG ++ LA+ L + +
Sbjct: 147 DITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSR 206
Query: 265 DSYALVVSTENITMNWYGGNDRS---MLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHT 321
+ LVV+ E +T+ ++ G D LL LF G AA+++ + D R +E++
Sbjct: 207 GARVLVVAAE-LTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDVERPLFEIVSA 265
Query: 322 LRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLL 381
+T D + N + +R+ + + + + G+ ++ + + L
Sbjct: 266 AQTIIPESDHALNMRFTE----RRLDGVLGRQVPGLIGDNVERCLLDM------FGPLLG 315
Query: 382 FSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTL 441
+F + +H G ++D+V+ L L + SR L
Sbjct: 316 GDGGGGWNDLF-----------------WAVHPGSSTIMDQVDAALGLEPGKLAASRRVL 358
Query: 442 YRFGNTSSSCLWYELAYFEAKGRIRKGDRTW-----QIAFGSGFKCNSAVWRALRTIN 494
+GN S + + + L + + W +AFG G ++ + A +N
Sbjct: 359 SDYGNMSGATVIFALDELRRQRKEAAAAGEWPELGVMMAFGPGMTVDAMLLHATSHVN 416
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XET|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
Length = 413
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 141/345 (40%), Gaps = 57/345 (16%)
Query: 131 FRMAAKNGYFTEESLAFQKKVVERSGIGK--MSGGPKSLFDNP----------LDNKNMA 178
FR+ N + TE F K++ ERS I + M + L NP LD +
Sbjct: 63 FRITG-NEHNTELKDKF-KRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAM 120
Query: 179 LAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS 238
LAM E + A ++ + + G I L+ S+ P V L ++
Sbjct: 121 LAM-EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKR 179
Query: 239 YNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSM--LLTNCLFR 296
+ GC AG + +A+ L + + LV+ +E + + G ++ + L+ LF
Sbjct: 180 VGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFG 239
Query: 297 LGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLM 355
G +A+++ ++ +A +E++ T +T V E
Sbjct: 240 DGASALIVGADPIPQVEKACFEIVWTAQT----------VVPNSEG-------------- 275
Query: 356 AIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPY----IPDFKLAFEHFC 411
AI G+ + +T +P L++ I ++ + I D+ F +
Sbjct: 276 AIGGKVREVGLTFQLKGAVP---------DLISANIENCMVEAFSQFKISDWNKLF--WV 324
Query: 412 IHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYEL 456
+H GGRA+LD VE L L+ + P+R + +GN SS+C+ + L
Sbjct: 325 VHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFIL 369
>pdb|1I89|A Chain A, Chalcone Synthase (G256l)
pdb|1I89|B Chain B, Chalcone Synthase (G256l)
Length = 389
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 143/353 (40%), Gaps = 71/353 (20%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 77 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 136
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + G AG + LA+ L + + LVV +E +
Sbjct: 137 MPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 196
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 197 TFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 245
Query: 336 VSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQ-LLFSL-----TLVAR 389
I+ D + G + L + E L F L +V++
Sbjct: 246 --------------IAPD--------------SEGAIDLHLREAGLTFHLLKDVPGIVSK 277
Query: 390 KIFKMKIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFG 445
I K ++ + P D+ F + H GG A+LD+VE+ L L M +R L +G
Sbjct: 278 NITKALVEAFEPLGISDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYG 335
Query: 446 NTSSSCLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
N SS+C+ + L K + G +T W + FG G + V R++
Sbjct: 336 NMSSACVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f)
pdb|1I8B|B Chain B, Chalcone Synthase (g256f)
Length = 389
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 61/348 (17%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 77 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 136
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + G AG + LA+ L + + LVV +E +
Sbjct: 137 MPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 196
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 197 TFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 245
Query: 336 VSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLT-LVARKIFKM 394
I+ D + A+ ++ G ++ LL + +V++ I K
Sbjct: 246 --------------IAPD----SEGAIDFHLREAG-----LTFHLLKDVPGIVSKNITKA 282
Query: 395 KIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSS 450
++ + P D+ F + H GG A+LD+VE+ L L M +R L +GN SS+
Sbjct: 283 LVEAFEPLGISDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSA 340
Query: 451 CLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
C+ + L K + G +T W + FG G + V R++
Sbjct: 341 CVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant)
pdb|1D6I|B Chain B, Chalcone Synthase (H303q Mutant)
Length = 388
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 142/349 (40%), Gaps = 63/349 (18%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 76 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 135
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + G AG + LA+ L + + LVV +E +
Sbjct: 136 MPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 195
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 196 TFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 244
Query: 336 VSQQEDESKRIGVKISKDLM-AIAGEALKTNITTLGPLVLPMSEQLLFSLT-LVARKIFK 393
I+ D AI G + +T LL + +V++ I K
Sbjct: 245 --------------IAPDSEGAIDGHLREAGLTF----------HLLKDVPGIVSKNITK 280
Query: 394 MKIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSS 449
++ + P D+ F + GG A+LD+VE+ L L M +R L +GN SS
Sbjct: 281 ALVEAFEPLGISDYNSIF--WIAQPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSS 338
Query: 450 SCLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
+C+ + L K + G +T W + FG G + V R++
Sbjct: 339 ACVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 386
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
pdb|3OIT|B Chain B, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
Length = 387
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 139/359 (38%), Gaps = 50/359 (13%)
Query: 139 YFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAVIVGAIDELLAK 198
+ TEE L+ + V+R D P + + +A + A + +A+
Sbjct: 65 HHTEEMLSAHPEFVDR--------------DAPSLDARLDIAADAVPELAAEAAKKAIAE 110
Query: 199 TGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARR 258
G DI L+V ++ P + +V LR ++ L GC AG ++ LA+
Sbjct: 111 WGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKD 170
Query: 259 LLQVTPDSYALVVSTENITMNWYGGNDRS---MLLTNCLFRLGGAAILLSNRSSDRRRAK 315
L + + + LVV+ E +T+ ++ G D LL LF G AA+++ + D R
Sbjct: 171 LAENSRGARVLVVAAE-LTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDVERPL 229
Query: 316 YELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLP 375
+E++ +T D + N + +R+ + + + + G+ ++ + +
Sbjct: 230 FEIVSAAQTIIPESDHALNMRFTE----RRLDGVLGRQVPGLIGDNVERCLLDM------ 279
Query: 376 MSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLME 435
L +F + +H G ++D+V+ L L +
Sbjct: 280 FGPLLGGDGGGGWNDLF-----------------WAVHPGSSTIMDQVDAALGLEPGKLA 322
Query: 436 PSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTW-----QIAFGSGFKCNSAVWRA 489
SR L +GN S + + + L + + W +AFG G ++ + A
Sbjct: 323 ASRRVLSDYGNMSGATVIFALDELRRQRKEAAAAGEWPELGVMMAFGPGMTVDAMLLHA 381
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa)
Length = 387
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 142/349 (40%), Gaps = 63/349 (18%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 75 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 134
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + G AG + LA+ L + + LVV +E +
Sbjct: 135 MPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 194
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ LF G AA+++ S+ + + +E++ T +T
Sbjct: 195 TFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 243
Query: 336 VSQQEDESKRIGVKISKDLM-AIAGEALKTNITTLGPLVLPMSEQLLFSLT-LVARKIFK 393
I+ D AI G + +T LL + +V++ I K
Sbjct: 244 --------------IAPDSEGAIDGHLREAGLTF----------HLLKDVPGIVSKNITK 279
Query: 394 MKIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSS 449
++ + P D+ F + H GG A+LD+VE+ L L M +R L +G SS
Sbjct: 280 ALVEAFEPLGISDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGAMSS 337
Query: 450 SCLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
+C+ + L K + G +T W + FG G + V R++
Sbjct: 338 ACVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 385
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant
Length = 389
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 142/349 (40%), Gaps = 63/349 (18%)
Query: 167 LFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVK-------PRD-IGILLVNSSLFNP 218
L +NP + MA ++ + ++V + L + VK P+ I L+V ++
Sbjct: 77 LKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVD 136
Query: 219 TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM 278
P + LR + Y + G AG + LA+ L + + LVV +E +
Sbjct: 137 MPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAV 196
Query: 279 NWYGGNDRSM--LLTNCLFRLGGAAILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNC 335
+ G +D + L+ L G AA+++ S+ + + +E++ T +T
Sbjct: 197 TFRGPSDTHLDSLVGQALSGDGAAALIVGSDPVPEIEKPIFEMVWTAQT----------- 245
Query: 336 VSQQEDESKRIGVKISKDLM-AIAGEALKTNITTLGPLVLPMSEQLLFSLT-LVARKIFK 393
I+ D AI G + +T LL + +V++ I K
Sbjct: 246 --------------IAPDSEGAIDGHLREAGLTF----------HLLKDVPGIVSKNITK 281
Query: 394 MKIKPYIP----DFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSS 449
++ + P D+ F + H GG A+LD+VE+ L L M +R L +GN SS
Sbjct: 282 ALVEAFEPLGISDYNSIF--WIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSS 339
Query: 450 SCLWYELAYFEAKGRIRKGDRT------WQI--AFGSGFKCNSAVWRAL 490
+C+ + L K + G +T W + FG G + V R++
Sbjct: 340 ACVLFILDEMRKKS-TQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
pdb|2H84|B Chain B, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
Length = 374
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 114/263 (43%), Gaps = 32/263 (12%)
Query: 220 PSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN 279
P ++ +++ L ++ +L MGC AGL S+ A L + +P + LVV TE +++
Sbjct: 131 PDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLH 190
Query: 280 WYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQ 339
+ + ++ + +F G AA ++ YE++ ++ ++ + V
Sbjct: 191 FSNTDGGDQMVASSIFADGSAAYIIGCNPRIEETPLYEVMCSI--NRSFPNTENAMVWDL 248
Query: 340 EDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPY 399
E E +G+ S + + G ++ + TL + + L + T ++ K +
Sbjct: 249 EKEGWNLGLDAS--IPIVIGSGIEAFVDTL------LDKAKLQTSTAISAKDCE------ 294
Query: 400 IPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYF 459
F IH GG+++L +E L ++ + + + +GN SS+ + + + +
Sbjct: 295 ----------FLIHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDH- 343
Query: 460 EAKGRIRKGDRTWQI--AFGSGF 480
R K T+ I AFG G
Sbjct: 344 ---ARKSKSLPTYSISLAFGPGL 363
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|B Chain B, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|C Chain C, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|D Chain D, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
Length = 393
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 196 LAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDL 255
LA + +IG+L++ +S P + +V L +I + MGC+A + ++
Sbjct: 125 LAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGT 184
Query: 256 ARRLLQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAK 315
A ++ P ALVV E ++N +D + ++ + LF G AA+++
Sbjct: 185 ATNYVRAHPAMKALVVCIELFSVNAVFADDINDVVIHSLFGDGCAALVI---------GA 235
Query: 316 YELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLP 375
++ L K S++ + ++ +GV + E L I + V P
Sbjct: 236 SQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVN-HNGITCELSENLPGYIFS---GVAP 291
Query: 376 MSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLME 435
+ ++L+ L I D L + IH GG ++++ + L ++ L
Sbjct: 292 VVTEMLWDNGL------------QISDIDL----WAIHPGGPKIIEQSVRSLGISAELAA 335
Query: 436 PSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTW-QIAFGSGFKCNSAVWRALR 491
S L RFGN S L + L + K T AFG G ++ +R
Sbjct: 336 QSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR 392
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|C Chain C, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|D Chain D, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
Length = 393
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 196 LAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDL 255
LA + +IG+L++ +S P + +V L +I + MGC+A + ++
Sbjct: 125 LAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGT 184
Query: 256 ARRLLQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAK 315
A ++ P ALVV E ++N +D + ++ + LF G AA+++
Sbjct: 185 ATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVI---------GA 235
Query: 316 YELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLP 375
++ L K S++ + ++ +GV + E L I + V P
Sbjct: 236 SQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVN-HNGITCELSENLPGYIFS---GVAP 291
Query: 376 MSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLME 435
+ ++L+ L I D L + IH GG ++++ + L ++ L
Sbjct: 292 VVTEMLWDNGL------------QISDIDL----WAIHPGGPKIIEQSVRSLGISAELAA 335
Query: 436 PSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTW-QIAFGSGFKCNSAVWRALR 491
S L RFGN S L + L + K T AFG G ++ +R
Sbjct: 336 QSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR 392
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F)
pdb|3A5S|B Chain B, Benzalacetone Synthase (I207lL208F)
Length = 387
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 49/265 (18%)
Query: 244 MGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSM--LLTNCLFRLGGAA 301
+GC AG + LA+ + + + L+V +E T + G ++ + ++ LF G AA
Sbjct: 158 LGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQALFGDGAAA 217
Query: 302 ILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGE 360
+++ ++ R +EL+ T +T + + AI G
Sbjct: 218 VIVGADPDLTVERPIFELVSTAQT------------------------IVPESHGAIEGH 253
Query: 361 ALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIP----DFKLAFEHFCIHAGG 416
L++ ++ +P TL++ I + P D+ F + H GG
Sbjct: 254 LLESGLSFHLYKTVP---------TLISNNIKTCLSDAFTPLNISDWNSLF--WIAHPGG 302
Query: 417 RAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAK----GRIRKGDR-T 471
A+LD+V + L + ++ +R L +GN SS+ +++ + K G+ G+
Sbjct: 303 PAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLE 362
Query: 472 WQI--AFGSGFKCNSAVWRALRTIN 494
W + FG G + V R++ I+
Sbjct: 363 WGVLFGFGPGITVETVVLRSVPVIS 387
>pdb|3FK5|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Iii, Fabh (Xoo4209) From Xanthomonas Oryzae Pv.
Oryzae Kacc10331
Length = 338
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 127/300 (42%), Gaps = 42/300 (14%)
Query: 196 LAKTGVKPRDIGILLVNSSLFNP--TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISI 253
L G+ IG LLVN+S+ PS +++V + + + +++++ C A + +
Sbjct: 73 LIDAGIGIEKIG-LLVNTSVSRDYLEPSTASIVSGNLGVGDHCVTFDVAN-ACLAFINGM 130
Query: 254 DLARRLLQVTPDSYALVVSTENITMNWYGGNDR--SMLLTNCLFRLGGAAILLSNRSSDR 311
D+A R+L+ YALVV E + + +R S +T FR AA+ L ++
Sbjct: 131 DIAARMLERGEIDYALVVDGETANLVYEKTLERMTSPDVTEEEFRNELAALTLGCGAAAM 190
Query: 312 RRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGP 371
A+ EL+ +KG V++ E ++ + + D M T
Sbjct: 191 VMARTELVPDAPRYKGG-------VTRSATEWNKL-CRGNLDRM-----------VTDTR 231
Query: 372 LVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNE 431
L+L +L L AR++ + + F IH R K +
Sbjct: 232 LLLIEGIKLAQKTFLAARQVLGWAVDE--------LDQFVIHQVSRPHTAAFVKSFGI-- 281
Query: 432 WLMEPSR-MTLY-RFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSA--VW 487
+P++ MT++ GN + + L+ + GR++KGDR + GSG C+ A VW
Sbjct: 282 ---DPAKVMTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVVW 338
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWJ|B Chain B, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWK|A Chain A, Crystal Structure Of The Polyketide Synthase 1 From
Huperzia Serrata
Length = 402
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 13/101 (12%)
Query: 386 LVARKIFKMKIKP----YIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTL 441
L+++ I K+ +P + P + F + +H GG A+LD++E L L+ M+ SR L
Sbjct: 287 LISKNIDKVLAEPLEYVHFPSYNDMF--WAVHPGGPAILDQIEAKLGLSTDKMQASRDVL 344
Query: 442 YRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQI-AFGSGFK 481
+GN SS+ + + L +IRK + G GF+
Sbjct: 345 ASYGNMSSASVLFVL------DQIRKNSEELHLPTTGEGFE 379
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
pdb|2P0U|B Chain B, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
Length = 413
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 410 FCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWY------ELAYFEAKG 463
+ +H GG A+LD+VE L+L + + SR L +GN SS+ + + E + K
Sbjct: 318 WAVHPGGPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSLESNKS 377
Query: 464 RIRKGDR-TWQIAFGSGFKCNSAVWRAL 490
+G + I FG G + + RAL
Sbjct: 378 TFGEGSEWGFLIGFGPGLTVETLLLRAL 405
>pdb|3ROW|A Chain A, Crystal Structure Of Xanthomonas Campestri Olea
pdb|3ROW|B Chain B, Crystal Structure Of Xanthomonas Campestri Olea
pdb|3S1Z|A Chain A, Crystal Structure Of Acetamide Bound Xanthomonas Campestri
Olea
pdb|3S1Z|B Chain B, Crystal Structure Of Acetamide Bound Xanthomonas Campestri
Olea
pdb|3S20|A Chain A, Crystal Structure Of Cerulenin Bound Xanthomonas Campestri
Olea (Soak)
pdb|3S20|B Chain B, Crystal Structure Of Cerulenin Bound Xanthomonas Campestri
Olea (Soak)
Length = 344
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 45/303 (14%)
Query: 197 AKTGVKPRDIGI----LLVNSSLFNP--TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGL 250
A+ + +IGI LL+N+S+ PS +++V + + + +++++ C A +
Sbjct: 75 ARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVAN-ACLAFI 133
Query: 251 ISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDR--SMLLTNCLFRLGGAAILLSNRS 308
+D+A R+L+ YALVV E + + +R S +T FR AA+ L +
Sbjct: 134 NGMDIAARMLERGEIDYALVVDGETANLVYEKTLERMTSPDVTEEEFRNELAALTLGCGA 193
Query: 309 SDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITT 368
+ A+ EL+ +KG V++ E ++ + + D M T
Sbjct: 194 AAMVMARSELVPDAPRYKGG-------VTRSATEWNKL-CRGNLDRM-----------VT 234
Query: 369 LGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLK 428
L+L +L + A+++ ++ + F IH R K
Sbjct: 235 DTRLLLIEGIKLAQKTFVAAKQVLGWAVEE--------LDQFVIHQVSRPHTAAFVKSFG 286
Query: 429 LNEWLMEPSR-MTLY-RFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSA- 485
+ +P++ MT++ GN + + L+ + GR++KGDR + GSG C+ A
Sbjct: 287 I-----DPAKVMTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAE 341
Query: 486 -VW 487
VW
Sbjct: 342 VVW 344
>pdb|3S21|A Chain A, Crystal Structure Of Cerulenin Bound Xanthomonas Campestri
Olea (Co- Crystal)
pdb|3S23|A Chain A, Crystal Structure Of Cerulenin Bound Xanthomonas Campestri
Olea (Co- Crystal) Xe Derivative
Length = 345
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 45/303 (14%)
Query: 197 AKTGVKPRDIGI----LLVNSSLFNP--TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGL 250
A+ + +IGI LL+N+S+ PS +++V + + + +++++ C A +
Sbjct: 76 ARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVAN-ACLAFI 134
Query: 251 ISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDR--SMLLTNCLFRLGGAAILLSNRS 308
+D+A R+L+ YALVV E + + +R S +T FR AA+ L +
Sbjct: 135 NGMDIAARMLERGEIDYALVVDGETANLVYEKTLERMTSPDVTEEEFRNELAALTLGCGA 194
Query: 309 SDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITT 368
+ A+ EL+ +KG V++ E ++ + + D M T
Sbjct: 195 AAMVMARSELVPDAPRYKGG-------VTRSATEWNKL-CRGNLDRM-----------VT 235
Query: 369 LGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLK 428
L+L +L + A+++ ++ + F IH R K
Sbjct: 236 DTRLLLIEGIKLAQKTFVAAKQVLGWAVEE--------LDQFVIHQVSRPHTAAFVKSFG 287
Query: 429 LNEWLMEPSR-MTLY-RFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSA- 485
+ +P++ MT++ GN + + L+ + GR++KGDR + GSG C+ A
Sbjct: 288 I-----DPAKVMTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAE 342
Query: 486 -VW 487
VW
Sbjct: 343 VVW 345
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5Q|B Chain B, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5R|A Chain A, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
pdb|3A5R|B Chain B, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
Length = 387
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 49/265 (18%)
Query: 244 MGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSM--LLTNCLFRLGGAA 301
+GC AG + LA+ + + + L+V +E T + G ++ + ++ + G AA
Sbjct: 158 LGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAA 217
Query: 302 ILL-SNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGE 360
+++ ++ R +EL+ T +T + + AI G
Sbjct: 218 VIVGADPDLTVERPIFELVSTAQT------------------------IVPESHGAIEGH 253
Query: 361 ALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIP----DFKLAFEHFCIHAGG 416
L++ ++ +P TL++ I + P D+ F + H GG
Sbjct: 254 LLESGLSFHLYKTVP---------TLISNNIKTCLSDAFTPLNISDWNSLF--WIAHPGG 302
Query: 417 RAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAK----GRIRKGDR-T 471
A+LD+V + L + ++ +R L +GN SS+ +++ + K G+ G+
Sbjct: 303 PAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLE 362
Query: 472 WQI--AFGSGFKCNSAVWRALRTIN 494
W + FG G + V R++ I+
Sbjct: 363 WGVLFGFGPGITVETVVLRSVPVIS 387
>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D51|B Chain B, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D52|A Chain A, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
pdb|2D52|B Chain B, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
Length = 406
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 413 HAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFE----AKGRIRKG 468
H GGRA+LD+VE LKL +R L+ +GN S+ + Y L AKG G
Sbjct: 319 HPGGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYG 378
Query: 469 DR-TWQI--AFGSGFKCNSAVWRAL 490
+ W + FG G + + +L
Sbjct: 379 EGLEWGVLLGFGPGITVETILLHSL 403
>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A
pdb|2D3M|B Chain B, Pentaketide Chromone Synthase Complexed With Coenzyme A
Length = 406
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 413 HAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFE----AKGRIRKG 468
H GGRA+LD+VE LKL +R L+ +GN S+ + Y L AKG G
Sbjct: 319 HPGGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYG 378
Query: 469 DR-TWQI--AFGSGFKCNSAVWRAL 490
+ W + FG G + + +L
Sbjct: 379 EGLEWGVLLGFGPGITVETILLHSL 403
>pdb|1UB7|A Chain A, The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier
Protein] Synthase Iii (Fabh)from Thermus Thermophilus.
pdb|1UB7|B Chain B, The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier
Protein] Synthase Iii (Fabh)from Thermus Thermophilus.
pdb|1UB7|C Chain C, The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier
Protein] Synthase Iii (Fabh)from Thermus Thermophilus.
pdb|1UB7|D Chain D, The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier
Protein] Synthase Iii (Fabh)from Thermus Thermophilus
Length = 322
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 359 GEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRA 418
G ++K + G V + +++ + TL A I K + P D +L F H
Sbjct: 200 GTSMKNRLYMNGREVFKFAVRVMNTATLEA--IEKAGLTP--EDIRL----FVPHQANLR 251
Query: 419 VLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGS 478
++D + L L W E + + R+GNTS++ + L GRIR+GD ++FG+
Sbjct: 252 IIDAARERLGL-PW--ERVAVNVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGA 308
Query: 479 GFKCNSAV 486
G +AV
Sbjct: 309 GLTWAAAV 316
>pdb|4EWP|A Chain A, Crystal Structure Of Fabh From Micrococcus Luteus
pdb|4EWP|B Chain B, Crystal Structure Of Fabh From Micrococcus Luteus
pdb|4EWP|C Chain C, Crystal Structure Of Fabh From Micrococcus Luteus
pdb|4EWP|D Chain D, Crystal Structure Of Fabh From Micrococcus Luteus
pdb|4EWP|E Chain E, Crystal Structure Of Fabh From Micrococcus Luteus
pdb|4EWP|F Chain F, Crystal Structure Of Fabh From Micrococcus Luteus
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 132/323 (40%), Gaps = 34/323 (10%)
Query: 174 NKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLF-NPTPSLSAMVVNHYKL 232
+ A A + + VGA E L + G++ D+ ++V++ F + TPS +A+V H
Sbjct: 52 TRQRATAEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVA-HEIG 110
Query: 233 RGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSMLLTN 292
+Y++ C+ + A L++ + LVV E ++ + DRS+ +
Sbjct: 111 ATPAPAYDVSA-ACAGYCYGVAQADALVRSGTARHVLVVGVERLS-DVVDPTDRSI---S 165
Query: 293 CLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVS----QQEDESKRIGV 348
L G A++++ +SD + G+D + ++ +S Q E
Sbjct: 166 FLLGDGAGAVIVA--ASDEPGISPSVW-------GSDGERWSTISMTHSQLELRDAVEHA 216
Query: 349 KISKDLMAIAGEA--LKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMK-IKPYIPDFKL 405
+ + D AI G L + GP V + ++S+ VAR+ ++P
Sbjct: 217 RTTGDASAITGAEGMLWPTLRQDGPSVFRWA---VWSMAKVAREALDAAGVEPE------ 267
Query: 406 AFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRI 465
F H ++DE K LKL E ++ + GNTS++ + + +
Sbjct: 268 DLAAFIPHQANMRIIDEFAKQLKLPESVV--VARDIADAGNTSAASIPLAMHRLLEENPE 325
Query: 466 RKGDRTWQIAFGSGFKCNSAVWR 488
G QI FG+G + V R
Sbjct: 326 LSGGLALQIGFGAGLVYGAQVVR 348
>pdb|3GWA|A Chain A, 1.6 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
pdb|3GWA|B Chain B, 1.6 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
pdb|3GWE|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
pdb|3GWE|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
Length = 365
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 118/319 (36%), Gaps = 55/319 (17%)
Query: 180 AMKETKAVIV-GAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNH---YKLRGN 235
A +ET A + A +L A+ V + +++ + + SA ++ H
Sbjct: 75 APRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAG 134
Query: 236 ILSYNLG------GMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSML 289
L NLG G+ + GL+ AR +L +T D+Y+ + + ++ G+ S
Sbjct: 135 ALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYLHPLDKSVRTLFGDGASAT 194
Query: 290 LT----NCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKR 345
L R+G R + K L + KS + + ED S
Sbjct: 195 AVIAEHGELERIGPFVFGTDGRGAPNLIVKAGLFR--------EPKSADSAREHEDASG- 245
Query: 346 IGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKL 405
N+ T L + +E + FSL V R ++ P +
Sbjct: 246 -------------------NVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAGEP--RE 284
Query: 406 AFEHFCIHAGGRAVLDEVEKHLKLNEW----LMEPSRMTLYRFGNTSSSCLWYELAYFEA 461
+ F +H R +LD + K +K+ E LME GNT SS L L A
Sbjct: 285 NIDCFVLHQANRFMLDALRKKMKIPEHKFPVLME-------HCGNTVSSTLPLALETMRA 337
Query: 462 KGRIRKGDRTWQIAFGSGF 480
G + +G R + FG G+
Sbjct: 338 NGTLARGMRLMLLGFGVGY 356
>pdb|1HN9|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii
pdb|1HN9|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii
pdb|1HND|A Chain A, Crystal Structure Of Beta-ketoacyl-acp Synthase Iii-coa
Complex
pdb|1HNJ|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii +
Malonyl-Coa
pdb|1HNK|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii, Apo
Tetragonal Form
pdb|2EFT|A Chain A, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A (High
Concentration (1.7mm) Soak)
pdb|2EFT|B Chain B, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A (High
Concentration (1.7mm) Soak)
pdb|2GYO|A Chain A, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A
pdb|2GYO|B Chain B, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A
Length = 317
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 117/290 (40%), Gaps = 41/290 (14%)
Query: 200 GVKPRDIGILLV-NSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARR 258
G++ IG+++V +S + PS + + + ++G ++++ C+ ++ +A +
Sbjct: 67 GIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG-CPAFDVAA-ACAGFTYALSVADQ 124
Query: 259 LLQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYEL 318
++ YALVV ++ + DR ++ +F G A +L A E
Sbjct: 125 YVKSGAVKYALVVGSD-VLARTCDPTDRGTII---IFGDGAGAAVL---------AASEE 171
Query: 319 LHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSE 378
+ TH AD ++ + R+ + S L E K +T L +V
Sbjct: 172 PGIISTHLHADGSYGELLTLPN--ADRVNPENSIHLTMAGNEVFKVAVTELAHIV----- 224
Query: 379 QLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSR 438
TL A + + ++ +P H ++ K L ++ M+
Sbjct: 225 ----DETLAANNLDRSQLDWLVP-----------HQANLRIISATAKKLGMS---MDNVV 266
Query: 439 MTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWR 488
+TL R GNTS++ + L GRI+ G AFG GF SA+ R
Sbjct: 267 VTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVR 316
>pdb|3H76|A Chain A, Crystal Structure Of Pqsd, A Key Enzyme In Pseudomonas
Aeruginosa Quinolone Signal Biosynthesis Pathway
pdb|3H76|B Chain B, Crystal Structure Of Pqsd, A Key Enzyme In Pseudomonas
Aeruginosa Quinolone Signal Biosynthesis Pathway
Length = 359
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 30/314 (9%)
Query: 182 KETKAVIVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKLRGNILSYN 240
+ A++V A + + G+ P DI +LLVN+ S + PS + ++ LR +I +
Sbjct: 72 QAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVLD 130
Query: 241 LGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGA 300
+ CS L + +AR + + LVV E ++ +DR L+ L GA
Sbjct: 131 IRAQ-CSGLLYGLQMARGQILAGLARHVLVVCGEVLS-KRMDCSDRGRNLSILLGDGAGA 188
Query: 301 AILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGE 360
++ + S + + L LR GAD ++ + S L GE
Sbjct: 189 VVVSAGESLE------DGLLDLRL--GADGNYFDLLMTAAPGSASPTFLDENVLREGGGE 240
Query: 361 ALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVL 420
L PM E +L +A ++ + + D +H H +L
Sbjct: 241 FLMRG--------RPMFEHASQTLVRIAGEMLAAH-ELTLDDI----DHVICHQPNLRIL 287
Query: 421 DEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGF 480
D V++ L + + +T+ R GN +S+ LA F I+ G R + +GSG
Sbjct: 288 DAVQEQLGIPQHKFA---VTVDRLGNMASASTPVTLAMFWPD--IQPGQRVLVLTYGSGA 342
Query: 481 KCNSAVWRALRTIN 494
+A++R +N
Sbjct: 343 TWGAALYRKPEEVN 356
>pdb|3IL9|A Chain A, Structure Of E. Coli Fabh
pdb|3IL9|B Chain B, Structure Of E. Coli Fabh
Length = 340
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 17/131 (12%)
Query: 372 LVLPMSEQL----LFSLTLVARKIFKMKIK--PYIPDFKLA--------FEHFCIHAGGR 417
L LP ++++ LT+ ++FK+ + +I D LA + H
Sbjct: 212 LTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANL 271
Query: 418 AVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFG 477
++ K L ++ M+ +TL R GNTS++ + L GRI+ G AFG
Sbjct: 272 RIISATAKKLGMS---MDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFG 328
Query: 478 SGFKCNSAVWR 488
GF SA+ R
Sbjct: 329 GGFTWGSALVR 339
>pdb|1MZS|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii With
Bound Dichlorobenzyloxy-Indole-Carboxylic Acid Inhibitor
Length = 317
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 17/131 (12%)
Query: 372 LVLPMSEQL----LFSLTLVARKIFKMKIK--PYIPDFKLA--------FEHFCIHAGGR 417
L LP ++++ LT+ ++FK+ + +I D LA + H
Sbjct: 189 LTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANL 248
Query: 418 AVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFG 477
++ K L ++ M+ +TL R GNTS++ + L GRI+ G AFG
Sbjct: 249 RIISATAKKLGMS---MDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFG 305
Query: 478 SGFKCNSAVWR 488
GF SA+ R
Sbjct: 306 GGFTWGSALVR 316
>pdb|3V7I|A Chain A, Germicidin Synthase (Gcs) From Streptomyces Coelicolor, A
Type Iii Polyketide Synthase
Length = 413
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 78/202 (38%), Gaps = 21/202 (10%)
Query: 127 AERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKA 186
A R+ +AA G + + + V G G + ++L + ++ A+ KA
Sbjct: 60 APRIDGIAASTGIESRGWMLPLEAAVAPGGGGDLGAAREALVRDGFTEQDANRAIAALKA 119
Query: 187 V---------------IVGAIDELLAK-----TGVKPRDIGILLVNSSLFNPTPSLSAMV 226
V V A E A+ G+ D+ L+ ++S P L +
Sbjct: 120 VPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVAL 179
Query: 227 VNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDR 286
N LRG+ + C AG S+ LA L+ PD LVV +E ++ + +D
Sbjct: 180 ANRLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQPADDT 239
Query: 287 -SMLLTNCLFRLGGAAILLSNR 307
L+ LF A +++ R
Sbjct: 240 LESLIVRLLFADTAVAAVVTGR 261
>pdb|3H77|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd In A
Covalent Complex With Anthranilate
pdb|3H77|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa Pqsd In A
Covalent Complex With Anthranilate
Length = 359
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 407 FEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIR 466
+H H +LD V++ L + + +T+ R GN +S+ LA F I+
Sbjct: 274 IDHVICHQPNLRILDAVQEQLGIPQHKFA---VTVDRLGNMASASTPVTLAMFWPD--IQ 328
Query: 467 KGDRTWQIAFGSGFKCNSAVWRALRTIN 494
G R + +GSG +A++R +N
Sbjct: 329 PGQRVLVLTYGSGATWGAALYRKPEEVN 356
>pdb|3H78|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd C112a
Mutant In Complex With Anthranilic Acid
pdb|3H78|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa Pqsd C112a
Mutant In Complex With Anthranilic Acid
Length = 359
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 407 FEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIR 466
+H H +LD V++ L + + +T+ R GN +S+ LA F I+
Sbjct: 274 IDHVICHQPNLRILDAVQEQLGIPQHKFA---VTVDRLGNMASASTPVTLAMFWPD--IQ 328
Query: 467 KGDRTWQIAFGSGFKCNSAVWRALRTIN 494
G R + +GSG +A++R +N
Sbjct: 329 PGQRVLVLTYGSGATWGAALYRKPEEVN 356
>pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|B Chain B, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|C Chain C, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|D Chain D, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 410 FCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAK----GRI 465
+ H G A++D +E L+L+ + +R +GN S+ +++ + + GR
Sbjct: 300 WVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359
Query: 466 RKGDR-TWQI--AFGSGFKCNSAVWRAL 490
GD W + FG G + V R++
Sbjct: 360 TTGDGLQWGVLLGFGPGLSIETVVLRSM 387
>pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|B Chain B, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|C Chain C, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|D Chain D, Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 410 FCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAK----GRI 465
+ H G A++D +E L+L+ + +R +GN S+ +++ + + GR
Sbjct: 300 WVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359
Query: 466 RKGDR-TWQI--AFGSGFKCNSAVWRAL 490
GD W + FG G + V R++
Sbjct: 360 TTGDGLQWGVLLGFGPGLSIETVVLRSM 387
>pdb|1EBL|A Chain A, The 1.8 A Crystal Structure And Active Site Architecture
Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Iii
(Fabh) From Escherichia Coli
pdb|1EBL|B Chain B, The 1.8 A Crystal Structure And Active Site Architecture
Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Iii
(Fabh) From Escherichia Coli
Length = 317
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 114/290 (39%), Gaps = 41/290 (14%)
Query: 200 GVKPRDIGILLV-NSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARR 258
G++ IG+++V +S + PS + + + ++G ++++ C+ ++ +A +
Sbjct: 67 GIEKDQIGLIVVATTSATHAFPSAACQIQSXLGIKG-CPAFDVAAA-CAGFTYALSVADQ 124
Query: 259 LLQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYEL 318
++ YALVV ++ + DR ++ +F G A +L A E
Sbjct: 125 YVKSGAVKYALVVGSD-VLARTCDPTDRGTII---IFGDGAGAAVL---------AASEE 171
Query: 319 LHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSE 378
+ TH AD ++ + R+ + S L E K +T L +V
Sbjct: 172 PGIISTHLHADGSYGELLTLPN--ADRVNPENSIHLTXAGNEVFKVAVTELAHIV----- 224
Query: 379 QLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSR 438
TL A + ++ +P H ++ K L + +
Sbjct: 225 ----DETLAANNNDRSQLDWLVP-----------HQANLRIISATAKKLGXS---XDNVV 266
Query: 439 MTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWR 488
+TL R GNTS++ + L GRI+ G AFG GF SA+ R
Sbjct: 267 VTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVR 316
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5
Length = 780
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 347 GVKISKDLMAIAGEALKTNITTLGPLVLPMSEQ 379
G KI D++A A E++ +++TTLGP P S++
Sbjct: 423 GKKILYDILAFAKESVNSHVTTLGPQNFPASDK 455
>pdb|1HNH|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii +
Degraded Form Of Acetyl-Coa
Length = 317
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 439 MTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWR 488
+TL R GNTS++ + L GRI+ G AFG GF SA+ R
Sbjct: 267 VTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVR 316
>pdb|3IL3|A Chain A, Structure Of Haemophilus Influenzae Fabh
Length = 323
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 125/314 (39%), Gaps = 56/314 (17%)
Query: 189 VGAIDELLAKTG------------VKPRDIGILLV-NSSLFNPTPSLSAMVVNHYKLRGN 235
+ A DE +A G + P+DI +++V +S + PS + V + +
Sbjct: 51 IAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNI-DD 109
Query: 236 ILSYNLGGMGCSAGLI-SIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCL 294
+S++L G + ++ +A + ++ ALV+ ++ + DRS T L
Sbjct: 110 AISFDLAA--AXTGFVYALSVADQFIRAGKVKKALVIGSD-LNSRKLDETDRS---TVVL 163
Query: 295 FRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDL 354
F G A++L ++ E + + H AD + ++Q E G++ S +
Sbjct: 164 FGDGAGAVIL-------EASEQEGIISTHLHASADKNNALVLAQPER-----GIEKSGYI 211
Query: 355 MAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHA 414
E K + L +V TL+A + K + +P H
Sbjct: 212 EMQGNETFKLAVRELSNVVEE---------TLLANNLDKKDLDWLVP-----------HQ 251
Query: 415 GGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQI 474
++ K L+++ M +TL ++ N S++ + L GRI++G
Sbjct: 252 ANLRIITATAKKLEMD---MSQVVVTLDKYANNSAATVPVALDEAIRDGRIQRGQLLLLE 308
Query: 475 AFGSGFKCNSAVWR 488
AFG G+ SA+ R
Sbjct: 309 AFGGGWTWGSALVR 322
>pdb|3S3L|A Chain A, Crystal Structure Of Cerj From Streptomyces Tendae
pdb|3S3L|B Chain B, Crystal Structure Of Cerj From Streptomyces Tendae
pdb|3T5Y|A Chain A, Crystal Structure Of Cerj From Streptomyces Tendae -
Malonic Acid Covalently Linked To The Catalytic Cystein
C116
pdb|3T6S|B Chain B, Crystal Structure Of Cerj From Streptomyces Tendae In
Complex With Coa
Length = 357
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 428 KLNEWLMEPSRMTLYRFGNTSSSC----LWYELAYFEAKGRIRKGDRTWQIAFGSGFKCN 483
+L++ L P T + +G T+ + LA+ ++ GDR G+G+ C
Sbjct: 273 ELHDLLGLPDERTSWAYGRTTGHVGAGDQYAGLAHLVENALVQPGDRVLLFGGGAGYTCT 332
Query: 484 SAVWRALR 491
+AV LR
Sbjct: 333 AAVVEILR 340
>pdb|3T5Y|B Chain B, Crystal Structure Of Cerj From Streptomyces Tendae -
Malonic Acid Covalently Linked To The Catalytic Cystein
C116
pdb|3T6S|A Chain A, Crystal Structure Of Cerj From Streptomyces Tendae In
Complex With Coa
pdb|3T8E|A Chain A, Crystal Structure Of Cerj From Streptomyces Tendae Soaked
With Cervik
pdb|3T8E|B Chain B, Crystal Structure Of Cerj From Streptomyces Tendae Soaked
With Cervik
Length = 357
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 428 KLNEWLMEPSRMTLYRFGNTSSSC----LWYELAYFEAKGRIRKGDRTWQIAFGSGFKCN 483
+L++ L P T + +G T+ + LA+ ++ GDR G+G+ C
Sbjct: 273 ELHDLLGLPDERTSWAYGRTTGHVGAGDQYAGLAHLVENALVQPGDRVLLFGGGAGYTCT 332
Query: 484 SAVWRALR 491
+AV LR
Sbjct: 333 AAVVEILR 340
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,926,021
Number of Sequences: 62578
Number of extensions: 540884
Number of successful extensions: 1117
Number of sequences better than 100.0: 57
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1054
Number of HSP's gapped (non-prelim): 79
length of query: 521
length of database: 14,973,337
effective HSP length: 103
effective length of query: 418
effective length of database: 8,527,803
effective search space: 3564621654
effective search space used: 3564621654
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)