Query 009966
Match_columns 521
No_of_seqs 302 out of 1944
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 19:27:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009966.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009966hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 1E-120 3E-125 973.3 41.8 499 20-519 13-511 (511)
2 PLN02854 3-ketoacyl-CoA syntha 100.0 2E-117 4E-122 951.1 47.6 497 17-515 17-520 (521)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 8E-115 2E-119 930.8 46.8 492 20-513 9-500 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 1E-108 3E-113 878.3 42.3 469 43-513 2-476 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 2.7E-99 6E-104 798.0 40.0 430 83-513 34-465 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 3.2E-77 6.9E-82 594.0 25.4 290 101-391 1-290 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 3.2E-56 6.9E-61 454.2 19.9 311 107-490 2-323 (323)
8 PLN03172 chalcone synthase fam 100.0 8E-51 1.7E-55 429.1 32.3 349 107-490 15-387 (393)
9 cd00831 CHS_like Chalcone and 100.0 6.3E-51 1.4E-55 426.4 29.4 345 109-487 2-361 (361)
10 PLN03168 chalcone synthase; Pr 100.0 4.6E-50 9.9E-55 423.2 32.0 351 107-493 14-389 (389)
11 PLN03169 chalcone synthase fam 100.0 1.5E-49 3.3E-54 419.9 31.8 353 103-490 16-389 (391)
12 PLN03173 chalcone synthase; Pr 100.0 1.8E-49 3.9E-54 418.5 31.3 352 107-492 15-389 (391)
13 PLN03171 chalcone synthase-lik 100.0 7.8E-49 1.7E-53 415.3 31.8 350 106-491 20-396 (399)
14 PLN03170 chalcone synthase; Pr 100.0 2.1E-48 4.5E-53 411.9 30.0 351 107-491 19-392 (401)
15 PRK05963 3-oxoacyl-(acyl carri 100.0 1.3E-47 2.8E-52 395.6 29.6 323 107-489 2-326 (326)
16 COG3424 BcsA Predicted naringe 100.0 1.6E-47 3.5E-52 376.4 24.9 347 109-491 2-354 (356)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 2E-46 4.3E-51 391.3 29.9 334 105-491 4-340 (353)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 3.5E-46 7.6E-51 393.2 29.0 332 107-489 46-379 (379)
19 PRK07204 3-oxoacyl-(acyl carri 100.0 7.4E-45 1.6E-49 375.6 30.6 325 107-489 3-329 (329)
20 PRK12879 3-oxoacyl-(acyl carri 100.0 9.3E-45 2E-49 373.6 30.9 321 107-489 3-324 (325)
21 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 2.9E-45 6.4E-50 378.5 26.8 321 108-489 2-325 (326)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 1E-44 2.2E-49 375.7 29.1 320 106-489 3-338 (338)
23 PRK06840 hypothetical protein; 100.0 9.8E-44 2.1E-48 368.8 30.9 328 106-490 2-336 (339)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 2.6E-43 5.6E-48 361.5 29.2 319 108-487 1-320 (320)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 3.6E-43 7.7E-48 361.0 28.7 313 108-489 2-318 (318)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 1.5E-41 3.4E-46 348.8 30.1 316 107-489 2-318 (319)
27 PRK04262 hypothetical protein; 100.0 5.5E-42 1.2E-46 357.2 26.8 312 107-494 1-313 (347)
28 PRK06816 3-oxoacyl-(acyl carri 100.0 4.4E-41 9.5E-46 354.3 30.8 346 108-490 2-378 (378)
29 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 4.6E-41 1E-45 350.1 25.2 320 109-507 2-322 (345)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 4.1E-39 9E-44 338.6 28.1 349 108-489 2-371 (372)
31 cd00827 init_cond_enzymes "ini 100.0 4.3E-39 9.2E-44 330.8 24.8 321 108-487 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 3E-35 6.5E-40 310.1 28.8 308 109-492 1-320 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 2.3E-33 5E-38 299.5 26.2 311 105-491 1-372 (459)
34 COG3425 PksG 3-hydroxy-3-methy 100.0 3.7E-31 8E-36 271.5 23.6 313 108-494 2-315 (377)
35 PF00195 Chal_sti_synt_N: Chal 100.0 1.3E-31 2.9E-36 260.6 17.1 204 103-308 9-226 (226)
36 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 5E-30 1.1E-34 273.5 26.6 317 108-492 1-376 (454)
37 cd00327 cond_enzymes Condensin 100.0 1.3E-27 2.8E-32 236.7 16.0 238 184-487 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 5.8E-25 1.3E-29 226.3 13.4 251 185-487 12-332 (332)
39 PF01154 HMG_CoA_synt_N: Hydro 99.8 3.4E-19 7.4E-24 166.1 13.0 168 105-308 1-173 (174)
40 PF02797 Chal_sti_synt_C: Chal 99.8 4.8E-19 1E-23 163.4 10.8 117 346-490 26-150 (151)
41 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 2.2E-19 4.7E-24 151.3 6.4 83 404-489 8-90 (90)
42 PRK06147 3-oxoacyl-(acyl carri 99.7 6E-16 1.3E-20 161.7 17.1 254 184-490 65-343 (348)
43 KOG1393 Hydroxymethylglutaryl- 99.7 3.3E-15 7.1E-20 151.6 17.7 316 105-494 8-381 (462)
44 TIGR02845 spore_V_AD stage V s 99.6 2.4E-14 5.2E-19 145.6 20.0 114 186-309 52-173 (327)
45 PRK08304 stage V sporulation p 99.5 6.9E-13 1.5E-17 135.3 19.8 114 187-309 59-179 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.5 4.4E-12 9.4E-17 134.6 22.3 120 183-309 70-243 (406)
47 cd00751 thiolase Thiolase are 99.5 3.1E-12 6.6E-17 135.7 19.1 89 188-277 26-115 (386)
48 PF08545 ACP_syn_III: 3-Oxoacy 99.4 6.5E-13 1.4E-17 109.7 6.7 80 239-330 1-80 (80)
49 PRK09051 beta-ketothiolase; Pr 99.4 5.7E-11 1.2E-15 126.3 21.4 89 189-278 32-122 (394)
50 PRK05656 acetyl-CoA acetyltran 99.3 5.3E-11 1.2E-15 126.5 20.1 89 189-278 31-120 (393)
51 PRK06064 acetyl-CoA acetyltran 99.3 1.1E-10 2.4E-15 123.9 20.9 89 187-277 25-116 (389)
52 cd00829 SCP-x_thiolase Thiolas 99.3 1.3E-10 2.8E-15 122.4 20.7 91 186-278 18-109 (375)
53 smart00825 PKS_KS Beta-ketoacy 99.3 7.4E-11 1.6E-15 126.2 18.4 121 183-308 86-246 (424)
54 PRK09052 acetyl-CoA acetyltran 99.3 1.9E-10 4.2E-15 122.4 20.3 89 189-278 36-127 (399)
55 PRK08313 acetyl-CoA acetyltran 99.3 4.8E-10 1E-14 119.0 22.1 87 189-277 29-117 (386)
56 cd00828 elong_cond_enzymes "el 99.3 4E-10 8.6E-15 120.0 21.0 122 183-308 71-242 (407)
57 TIGR03150 fabF beta-ketoacyl-a 99.2 6.4E-10 1.4E-14 118.3 20.2 121 183-308 70-242 (407)
58 PRK06501 3-oxoacyl-(acyl carri 99.2 1.4E-09 3E-14 116.9 22.9 118 184-308 75-256 (425)
59 cd00833 PKS polyketide synthas 99.2 1.5E-09 3.2E-14 115.8 20.9 119 183-308 86-246 (421)
60 PRK12404 stage V sporulation p 99.2 1.6E-09 3.5E-14 110.3 18.9 115 186-309 56-177 (334)
61 PRK06445 acetyl-CoA acetyltran 99.2 1.1E-09 2.3E-14 116.7 18.5 86 189-277 37-126 (394)
62 PRK06025 acetyl-CoA acetyltran 99.1 4E-09 8.6E-14 112.4 20.4 92 186-278 31-124 (417)
63 PRK07314 3-oxoacyl-(acyl carri 99.1 7.3E-09 1.6E-13 110.6 22.3 121 183-308 71-243 (411)
64 PRK06333 3-oxoacyl-(acyl carri 99.1 5.2E-09 1.1E-13 112.2 20.5 119 183-308 81-255 (424)
65 PRK07661 acetyl-CoA acetyltran 99.1 6.4E-09 1.4E-13 110.6 20.4 91 187-278 30-122 (391)
66 PRK06690 acetyl-CoA acetyltran 99.1 4.4E-09 9.4E-14 110.6 17.9 89 185-278 26-114 (361)
67 TIGR01930 AcCoA-C-Actrans acet 99.1 6.8E-10 1.5E-14 117.9 11.0 91 187-278 24-115 (386)
68 PRK07108 acetyl-CoA acetyltran 99.0 1E-09 2.2E-14 116.7 11.0 89 189-278 32-122 (392)
69 PRK08439 3-oxoacyl-(acyl carri 99.0 3.9E-08 8.5E-13 105.1 21.3 119 183-308 71-243 (406)
70 PRK06205 acetyl-CoA acetyltran 99.0 1.7E-09 3.8E-14 115.4 10.3 89 189-278 31-120 (404)
71 PRK08235 acetyl-CoA acetyltran 99.0 2.5E-09 5.4E-14 113.8 10.7 89 189-278 31-120 (393)
72 PRK08242 acetyl-CoA acetyltran 99.0 3.3E-09 7.1E-14 113.0 11.1 90 188-278 32-123 (402)
73 PRK08722 3-oxoacyl-(acyl carri 99.0 7.7E-08 1.7E-12 103.2 21.5 119 183-308 73-245 (414)
74 PRK06059 lipid-transfer protei 98.9 2.8E-09 6E-14 113.7 10.3 91 186-278 25-117 (399)
75 PRK07103 polyketide beta-ketoa 98.9 2.6E-08 5.7E-13 106.6 16.8 120 184-308 80-250 (410)
76 PRK12578 acetyl-CoA acetyltran 98.9 4.8E-09 1E-13 111.3 10.9 88 189-278 26-114 (385)
77 PRK08170 acetyl-CoA acetyltran 98.9 7.9E-09 1.7E-13 111.1 11.0 91 187-278 30-121 (426)
78 cd00826 nondecarbox_cond_enzym 98.9 8.4E-09 1.8E-13 109.8 10.7 92 185-278 24-117 (393)
79 PRK05952 3-oxoacyl-(acyl carri 98.9 1.9E-07 4.1E-12 99.0 20.5 115 187-308 59-221 (381)
80 PRK06954 acetyl-CoA acetyltran 98.8 1.4E-08 3E-13 108.2 10.3 91 187-278 34-125 (397)
81 PLN02787 3-oxoacyl-[acyl-carri 98.8 8.2E-07 1.8E-11 98.0 24.3 118 183-308 198-372 (540)
82 PRK05790 putative acyltransfer 98.8 1.8E-08 4E-13 107.2 11.0 89 189-278 31-120 (393)
83 PRK09185 3-oxoacyl-(acyl carri 98.8 1.1E-06 2.4E-11 93.6 24.4 81 220-307 137-233 (392)
84 cd00832 CLF Chain-length facto 98.8 6.3E-07 1.4E-11 95.7 22.3 119 183-309 70-241 (399)
85 PRK06065 acetyl-CoA acetyltran 98.8 2E-08 4.3E-13 106.9 10.3 86 189-276 34-121 (392)
86 PF00108 Thiolase_N: Thiolase, 98.8 2.9E-08 6.3E-13 100.1 10.4 92 186-278 28-120 (264)
87 PRK09116 3-oxoacyl-(acyl carri 98.8 2.9E-07 6.4E-12 98.4 17.8 117 184-308 73-244 (405)
88 PTZ00050 3-oxoacyl-acyl carrie 98.7 6.6E-07 1.4E-11 96.1 19.1 117 185-308 78-250 (421)
89 PRK07967 3-oxoacyl-(acyl carri 98.7 2.2E-06 4.7E-11 91.8 22.4 118 184-308 71-243 (406)
90 PRK07910 3-oxoacyl-(acyl carri 98.7 3E-06 6.6E-11 91.0 22.1 184 107-308 12-253 (418)
91 PRK06158 thiolase; Provisional 98.7 7.6E-08 1.6E-12 102.2 9.4 82 189-275 33-115 (384)
92 PRK07851 acetyl-CoA acetyltran 98.6 1.3E-07 2.8E-12 101.1 10.8 90 187-278 30-122 (406)
93 PLN02287 3-ketoacyl-CoA thiola 98.6 1.3E-07 2.8E-12 102.4 10.8 89 189-278 76-166 (452)
94 PRK07516 acetyl-CoA acetyltran 98.6 9.4E-08 2E-12 101.6 9.6 91 186-278 24-117 (389)
95 PRK06289 acetyl-CoA acetyltran 98.6 1.1E-07 2.5E-12 101.5 10.1 86 189-278 31-122 (403)
96 PRK08963 fadI 3-ketoacyl-CoA t 98.6 1.1E-07 2.5E-12 102.3 10.0 92 186-278 31-123 (428)
97 PRK13359 beta-ketoadipyl CoA t 98.6 1.6E-07 3.5E-12 100.2 11.0 93 185-278 27-122 (400)
98 PF00109 ketoacyl-synt: Beta-k 98.6 1.3E-07 2.8E-12 93.9 9.4 123 182-307 85-251 (254)
99 PRK06633 acetyl-CoA acetyltran 98.6 1.6E-07 3.4E-12 99.9 9.1 93 185-278 28-121 (392)
100 PRK07850 acetyl-CoA acetyltran 98.6 2.6E-07 5.7E-12 98.2 10.6 92 186-278 28-121 (387)
101 PRK09050 beta-ketoadipyl CoA t 98.6 2.5E-07 5.5E-12 98.7 10.3 92 186-278 28-122 (401)
102 PRK08131 acetyl-CoA acetyltran 98.6 3.3E-07 7.1E-12 97.9 10.9 93 185-278 27-121 (401)
103 PRK06366 acetyl-CoA acetyltran 98.5 3.6E-07 7.9E-12 97.2 10.6 92 186-278 28-120 (388)
104 PLN02836 3-oxoacyl-[acyl-carri 98.5 3.7E-06 8E-11 90.9 18.4 118 184-308 93-266 (437)
105 TIGR02430 pcaF beta-ketoadipyl 98.5 3.8E-07 8.2E-12 97.4 10.5 92 186-278 27-121 (400)
106 PLN02644 acetyl-CoA C-acetyltr 98.5 5.7E-07 1.2E-11 95.9 11.1 92 186-278 27-119 (394)
107 TIGR02446 FadI fatty oxidation 98.5 3.8E-07 8.2E-12 98.2 9.7 91 187-278 34-125 (430)
108 PRK08256 lipid-transfer protei 98.5 4.4E-07 9.6E-12 96.6 9.7 86 187-277 25-111 (391)
109 PRK06157 acetyl-CoA acetyltran 98.5 6.7E-07 1.5E-11 95.4 10.7 91 186-278 29-120 (398)
110 PRK06504 acetyl-CoA acetyltran 98.5 8.2E-07 1.8E-11 94.5 10.8 92 186-278 28-121 (390)
111 PRK08947 fadA 3-ketoacyl-CoA t 98.4 6.9E-07 1.5E-11 95.0 9.9 93 185-278 28-123 (387)
112 PTZ00455 3-ketoacyl-CoA thiola 98.4 1.2E-06 2.5E-11 94.7 11.1 91 187-278 51-152 (438)
113 PRK14691 3-oxoacyl-(acyl carri 98.4 4E-06 8.7E-11 87.7 14.8 116 186-308 6-173 (342)
114 PRK06365 acetyl-CoA acetyltran 98.4 1.1E-06 2.3E-11 94.8 10.3 90 186-277 39-130 (430)
115 PRK06519 3-oxoacyl-(acyl carri 98.4 2.6E-05 5.6E-10 83.3 20.0 119 184-309 73-255 (398)
116 TIGR02445 fadA fatty oxidation 98.4 1.2E-06 2.7E-11 93.0 8.9 92 186-278 27-121 (385)
117 PRK09268 acetyl-CoA acetyltran 98.3 3.1E-06 6.7E-11 91.2 10.8 91 187-278 34-125 (427)
118 PRK07801 acetyl-CoA acetyltran 98.3 2.6E-06 5.7E-11 90.4 9.9 91 187-278 29-121 (382)
119 TIGR02813 omega_3_PfaA polyket 98.3 5.7E-05 1.2E-09 96.0 23.1 120 182-308 91-282 (2582)
120 PF07451 SpoVAD: Stage V sporu 98.1 8.8E-05 1.9E-09 75.1 16.1 117 185-310 52-175 (329)
121 PRK08142 acetyl-CoA acetyltran 98.1 1.5E-05 3.3E-10 84.8 9.7 85 187-276 28-112 (388)
122 PRK08257 acetyl-CoA acetyltran 98.0 3.6E-05 7.8E-10 84.5 11.0 90 186-277 29-120 (498)
123 PRK07855 lipid-transfer protei 97.9 5.1E-05 1.1E-09 80.8 9.9 81 188-273 28-108 (386)
124 COG0304 FabB 3-oxoacyl-(acyl-c 97.8 0.00088 1.9E-08 71.8 17.4 122 181-309 68-244 (412)
125 PRK06066 acetyl-CoA acetyltran 97.6 0.00027 5.8E-09 75.2 10.6 86 187-277 28-116 (385)
126 KOG1389 3-oxoacyl CoA thiolase 97.6 0.00095 2E-08 67.6 13.2 92 187-279 64-156 (435)
127 COG3321 Polyketide synthase mo 97.5 0.003 6.4E-08 75.4 17.3 191 107-308 4-250 (1061)
128 COG0183 PaaJ Acetyl-CoA acetyl 97.5 0.00044 9.5E-09 73.8 9.2 90 189-279 32-125 (392)
129 PRK07937 lipid-transfer protei 97.2 0.0015 3.3E-08 68.7 9.9 86 187-277 27-114 (352)
130 KOG1390 Acetyl-CoA acetyltrans 97.1 0.0012 2.7E-08 67.0 7.5 89 189-278 35-124 (396)
131 KOG1406 Peroxisomal 3-ketoacyl 96.6 0.0042 9E-08 61.8 6.3 91 173-278 28-119 (408)
132 PF08540 HMG_CoA_synt_C: Hydro 96.6 0.0012 2.5E-08 67.3 2.5 61 433-493 143-205 (282)
133 PF08541 ACP_syn_III_C: 3-Oxoa 94.4 0.038 8.3E-07 46.1 3.2 75 196-274 1-78 (90)
134 KOG1394 3-oxoacyl-(acyl-carrie 94.1 0.23 4.9E-06 51.8 8.7 119 182-308 92-268 (440)
135 PRK06025 acetyl-CoA acetyltran 93.8 0.18 3.9E-06 54.3 7.7 91 189-306 318-416 (417)
136 KOG1391 Acetyl-CoA acetyltrans 93.6 0.13 2.7E-06 51.3 5.6 87 189-278 33-123 (396)
137 TIGR00748 HMG_CoA_syn_Arc hydr 93.4 0.27 5.9E-06 51.5 8.1 69 186-258 208-281 (345)
138 PRK06816 3-oxoacyl-(acyl carri 93.2 0.38 8.2E-06 51.1 9.0 90 182-275 268-365 (378)
139 PRK09258 3-oxoacyl-(acyl carri 92.7 0.38 8.2E-06 49.9 8.1 91 180-274 233-326 (338)
140 PRK05963 3-oxoacyl-(acyl carri 92.6 0.34 7.3E-06 50.1 7.4 89 181-273 222-313 (326)
141 cd00825 decarbox_cond_enzymes 92.3 0.43 9.3E-06 49.0 7.7 76 188-263 207-286 (332)
142 PRK07204 3-oxoacyl-(acyl carri 91.8 0.37 8E-06 49.8 6.6 84 182-272 226-315 (329)
143 TIGR00747 fabH 3-oxoacyl-(acyl 91.2 0.67 1.4E-05 47.6 7.7 84 183-273 216-305 (318)
144 PRK09352 3-oxoacyl-(acyl carri 91.2 0.54 1.2E-05 48.2 7.0 85 182-273 215-305 (319)
145 KOG1392 Acetyl-CoA acetyltrans 91.0 0.2 4.3E-06 50.6 3.4 90 188-278 70-160 (465)
146 PRK12879 3-oxoacyl-(acyl carri 90.7 0.79 1.7E-05 47.1 7.7 84 183-273 222-311 (325)
147 PRK04262 hypothetical protein; 90.7 0.54 1.2E-05 49.2 6.5 67 187-257 210-281 (347)
148 PLN02326 3-oxoacyl-[acyl-carri 90.6 0.64 1.4E-05 49.4 7.0 86 183-272 277-365 (379)
149 PLN02644 acetyl-CoA C-acetyltr 90.4 1.1 2.4E-05 47.9 8.8 86 404-490 308-393 (394)
150 PF13723 Ketoacyl-synt_2: Beta 90.3 5.3 0.00012 39.3 12.6 117 183-309 33-172 (218)
151 PRK06840 hypothetical protein; 90.1 0.96 2.1E-05 47.0 7.7 81 185-272 236-321 (339)
152 cd00327 cond_enzymes Condensin 90.1 1.3 2.7E-05 43.6 8.2 75 189-263 148-226 (254)
153 cd00830 KAS_III Ketoacyl-acyl 90.1 0.6 1.3E-05 47.8 6.1 85 182-273 219-309 (320)
154 CHL00203 fabH 3-oxoacyl-acyl-c 89.2 0.81 1.8E-05 47.4 6.4 80 186-272 226-311 (326)
155 PRK13359 beta-ketoadipyl CoA t 88.6 1.5 3.3E-05 47.0 8.1 93 189-306 299-399 (400)
156 PRK09050 beta-ketoadipyl CoA t 88.1 1.3 2.7E-05 47.7 7.1 93 189-306 300-400 (401)
157 PRK06954 acetyl-CoA acetyltran 87.9 2.1 4.5E-05 45.9 8.6 84 404-489 312-396 (397)
158 PRK07515 3-oxoacyl-(acyl carri 87.9 1.4 3E-05 46.6 7.1 85 182-273 267-358 (372)
159 PF02803 Thiolase_C: Thiolase, 86.6 2.6 5.6E-05 37.8 7.0 69 189-263 25-101 (123)
160 PRK06504 acetyl-CoA acetyltran 86.4 3.5 7.6E-05 44.1 9.3 81 404-488 305-388 (390)
161 PRK06147 3-oxoacyl-(acyl carri 86.2 1.5 3.2E-05 46.1 6.2 87 188-274 236-330 (348)
162 PRK07801 acetyl-CoA acetyltran 85.9 2.9 6.4E-05 44.4 8.3 84 404-488 297-380 (382)
163 PRK05790 putative acyltransfer 85.5 3.3 7E-05 44.2 8.5 85 404-489 308-392 (393)
164 PRK08242 acetyl-CoA acetyltran 84.8 3.8 8.3E-05 44.0 8.6 54 404-458 317-370 (402)
165 TIGR02430 pcaF beta-ketoadipyl 84.6 3.5 7.7E-05 44.3 8.2 83 404-488 313-398 (400)
166 PRK06445 acetyl-CoA acetyltran 84.5 3.1 6.7E-05 44.5 7.7 66 189-260 295-368 (394)
167 PRK08256 lipid-transfer protei 84.4 6.5 0.00014 41.9 10.1 75 404-479 281-380 (391)
168 PLN02287 3-ketoacyl-CoA thiola 84.1 3.8 8.1E-05 44.8 8.3 90 404-495 348-440 (452)
169 PRK09052 acetyl-CoA acetyltran 83.8 3.4 7.4E-05 44.4 7.7 91 189-306 300-398 (399)
170 PRK05656 acetyl-CoA acetyltran 83.8 2.2 4.7E-05 45.7 6.2 92 189-307 294-393 (393)
171 TIGR01930 AcCoA-C-Actrans acet 83.7 3.2 7E-05 44.2 7.5 83 404-487 303-385 (386)
172 PRK07851 acetyl-CoA acetyltran 83.4 3.5 7.7E-05 44.3 7.6 85 404-489 320-404 (406)
173 PRK07850 acetyl-CoA acetyltran 82.7 6.2 0.00013 42.2 9.1 84 404-489 302-386 (387)
174 PRK09051 beta-ketothiolase; Pr 82.7 2.5 5.4E-05 45.3 6.1 91 189-306 295-393 (394)
175 PRK06690 acetyl-CoA acetyltran 82.5 5.5 0.00012 42.2 8.5 69 188-262 260-336 (361)
176 PRK08235 acetyl-CoA acetyltran 82.1 4.2 9.2E-05 43.5 7.6 83 404-488 308-391 (393)
177 cd00831 CHS_like Chalcone and 81.8 3.1 6.7E-05 43.7 6.4 88 182-273 255-350 (361)
178 PRK07108 acetyl-CoA acetyltran 81.6 4.2 9E-05 43.6 7.3 55 404-459 307-361 (392)
179 PLN03169 chalcone synthase fam 81.3 4.2 9.1E-05 43.5 7.2 88 183-272 278-374 (391)
180 cd00751 thiolase Thiolase are 80.7 5.6 0.00012 42.3 7.9 40 189-233 288-328 (386)
181 PRK06205 acetyl-CoA acetyltran 80.6 8.7 0.00019 41.3 9.4 85 404-490 315-403 (404)
182 COG0332 FabH 3-oxoacyl-[acyl-c 80.5 3 6.5E-05 43.5 5.6 52 180-235 217-268 (323)
183 PRK12880 3-oxoacyl-(acyl carri 80.5 3.6 7.7E-05 43.4 6.3 71 182-256 238-312 (353)
184 COG3425 PksG 3-hydroxy-3-methy 80.1 6.8 0.00015 41.6 8.0 81 186-272 209-296 (377)
185 cd00827 init_cond_enzymes "ini 78.3 6.9 0.00015 40.0 7.5 91 180-274 217-314 (324)
186 PRK08257 acetyl-CoA acetyltran 78.1 5.7 0.00012 43.9 7.2 78 189-271 295-381 (498)
187 PRK07661 acetyl-CoA acetyltran 78.1 3.3 7.2E-05 44.3 5.2 91 189-306 292-390 (391)
188 PRK06633 acetyl-CoA acetyltran 77.9 8 0.00017 41.5 8.0 52 404-458 307-360 (392)
189 PRK06366 acetyl-CoA acetyltran 77.2 15 0.00032 39.3 9.8 82 404-490 302-387 (388)
190 PRK08963 fadI 3-ketoacyl-CoA t 77.1 14 0.0003 40.0 9.7 85 404-489 326-427 (428)
191 PRK08947 fadA 3-ketoacyl-CoA t 75.3 18 0.0004 38.6 9.9 84 404-488 299-385 (387)
192 TIGR01835 HMG-CoA-S_prok 3-hyd 75.1 6.7 0.00015 41.7 6.5 75 181-256 200-286 (379)
193 PF00814 Peptidase_M22: Glycop 73.8 4.8 0.0001 40.8 4.8 40 180-220 26-65 (268)
194 COG1214 Inactive homolog of me 73.5 9.6 0.00021 37.5 6.7 55 189-243 42-97 (220)
195 PRK12578 acetyl-CoA acetyltran 73.2 22 0.00048 37.7 9.9 57 404-461 274-348 (385)
196 TIGR02445 fadA fatty oxidation 73.1 27 0.00058 37.3 10.4 82 404-489 297-384 (385)
197 COG4126 Hydantoin racemase [Am 72.4 14 0.00031 36.3 7.4 101 141-263 118-218 (230)
198 cd00829 SCP-x_thiolase Thiolas 72.2 12 0.00027 39.2 7.7 43 188-234 253-295 (375)
199 PRK09604 UGMP family protein; 72.0 15 0.00033 38.4 8.1 49 185-233 52-105 (332)
200 PF02801 Ketoacyl-synt_C: Beta 69.5 1.3 2.7E-05 39.0 -0.5 75 189-263 28-110 (119)
201 PRK08131 acetyl-CoA acetyltran 69.0 21 0.00046 38.4 8.6 54 404-458 313-368 (401)
202 KOG2708 Predicted metalloprote 68.8 18 0.0004 35.9 7.2 106 160-277 30-137 (336)
203 TIGR00329 gcp_kae1 metallohydr 68.2 17 0.00037 37.5 7.4 35 186-220 50-84 (305)
204 PRK09268 acetyl-CoA acetyltran 67.8 25 0.00054 38.1 8.9 24 189-212 312-335 (427)
205 PRK09185 3-oxoacyl-(acyl carri 67.6 21 0.00046 38.0 8.3 74 189-263 263-340 (392)
206 PF01135 PCMT: Protein-L-isoas 66.8 6.3 0.00014 38.5 3.7 41 444-484 49-89 (209)
207 PRK07314 3-oxoacyl-(acyl carri 66.3 17 0.00037 38.7 7.3 75 189-263 279-359 (411)
208 PRK06064 acetyl-CoA acetyltran 66.2 19 0.0004 38.3 7.5 40 189-233 261-301 (389)
209 TIGR03725 bact_YeaZ universal 65.8 11 0.00024 36.3 5.2 35 186-220 35-69 (202)
210 PRK14878 UGMP family protein; 65.6 12 0.00025 39.1 5.6 53 180-233 41-98 (323)
211 cd00834 KAS_I_II Beta-ketoacyl 65.1 10 0.00022 40.1 5.3 75 189-263 278-358 (406)
212 PRK00768 nadE NAD synthetase; 64.1 1.5E+02 0.0033 30.2 13.1 151 127-303 3-180 (268)
213 PRK07937 lipid-transfer protei 62.6 53 0.0011 34.7 10.0 73 404-478 264-337 (352)
214 PRK07516 acetyl-CoA acetyltran 62.3 15 0.00034 39.0 6.0 68 189-261 263-355 (389)
215 PF02803 Thiolase_C: Thiolase, 62.0 16 0.00034 32.7 5.0 83 404-488 39-122 (123)
216 cd00826 nondecarbox_cond_enzym 60.7 20 0.00043 38.4 6.5 69 189-261 272-364 (393)
217 cd00828 elong_cond_enzymes "el 60.3 15 0.00032 39.1 5.4 76 188-263 276-357 (407)
218 PRK14691 3-oxoacyl-(acyl carri 59.9 22 0.00047 37.4 6.5 44 189-232 209-253 (342)
219 PRK06059 lipid-transfer protei 58.8 43 0.00093 35.8 8.7 24 189-212 276-299 (399)
220 TIGR02446 FadI fatty oxidation 58.5 46 0.001 36.1 8.9 17 292-308 266-282 (430)
221 TIGR03722 arch_KAE1 universal 58.5 16 0.00034 38.0 5.1 37 180-217 42-78 (322)
222 PRK06519 3-oxoacyl-(acyl carri 58.3 29 0.00063 37.3 7.2 44 188-232 282-326 (398)
223 TIGR03150 fabF beta-ketoacyl-a 57.9 19 0.00042 38.1 5.8 44 189-232 278-322 (407)
224 PTZ00050 3-oxoacyl-acyl carrie 57.4 28 0.00061 37.5 7.0 44 189-232 286-331 (421)
225 smart00825 PKS_KS Beta-ketoacy 57.1 31 0.00067 36.8 7.3 44 189-232 282-326 (424)
226 PLN03170 chalcone synthase; Pr 56.2 22 0.00048 38.2 5.9 71 183-257 278-354 (401)
227 TIGR03723 bact_gcp putative gl 56.0 38 0.00082 35.1 7.4 54 186-243 51-109 (314)
228 KOG2707 Predicted metalloprote 56.0 30 0.00066 36.4 6.5 49 185-233 83-136 (405)
229 COG0533 QRI7 Metal-dependent p 55.8 54 0.0012 34.5 8.4 91 180-276 47-138 (342)
230 PTZ00455 3-ketoacyl-CoA thiola 55.6 30 0.00065 37.7 6.9 42 189-234 312-353 (438)
231 COG0304 FabB 3-oxoacyl-(acyl-c 54.9 21 0.00046 38.5 5.5 43 189-231 279-322 (412)
232 PRK09605 bifunctional UGMP fam 54.9 21 0.00046 39.6 5.7 84 180-275 45-134 (535)
233 cd00832 CLF Chain-length facto 53.4 25 0.00054 37.7 5.7 75 188-263 272-351 (399)
234 PRK07855 lipid-transfer protei 52.9 46 0.00099 35.5 7.6 24 189-212 269-292 (386)
235 PRK06158 thiolase; Provisional 52.4 42 0.0009 35.8 7.2 24 189-212 257-280 (384)
236 PRK06501 3-oxoacyl-(acyl carri 52.1 31 0.00068 37.2 6.3 44 188-231 291-335 (425)
237 PLN02787 3-oxoacyl-[acyl-carri 51.1 33 0.00071 38.5 6.4 44 189-232 408-452 (540)
238 PLN03173 chalcone synthase; Pr 51.0 33 0.00071 36.8 6.2 72 182-257 273-350 (391)
239 PRK08170 acetyl-CoA acetyltran 50.8 69 0.0015 34.7 8.7 17 292-308 263-279 (426)
240 PRK05952 3-oxoacyl-(acyl carri 49.7 27 0.00058 37.3 5.2 43 189-231 257-300 (381)
241 PRK08313 acetyl-CoA acetyltran 49.5 77 0.0017 33.8 8.7 40 189-233 258-300 (386)
242 PRK06333 3-oxoacyl-(acyl carri 48.8 49 0.0011 35.4 7.2 43 189-231 291-334 (424)
243 PRK06289 acetyl-CoA acetyltran 48.2 71 0.0015 34.2 8.3 40 189-233 279-319 (403)
244 PRK06365 acetyl-CoA acetyltran 47.4 74 0.0016 34.5 8.2 24 189-212 296-321 (430)
245 PRK08722 3-oxoacyl-(acyl carri 46.7 38 0.00083 36.5 5.9 43 189-231 281-324 (414)
246 PTZ00340 O-sialoglycoprotein e 46.3 68 0.0015 33.9 7.5 36 181-217 47-82 (345)
247 cd00833 PKS polyketide synthas 45.5 42 0.00092 35.5 6.0 76 188-263 281-365 (421)
248 PLN03172 chalcone synthase fam 44.8 43 0.00093 35.9 5.9 70 183-256 274-349 (393)
249 cd02185 AroH Chorismate mutase 44.8 62 0.0014 28.8 5.8 53 190-245 24-78 (117)
250 PRK09116 3-oxoacyl-(acyl carri 44.7 34 0.00074 36.7 5.2 43 189-231 278-321 (405)
251 PLN03171 chalcone synthase-lik 41.9 72 0.0016 34.2 7.1 71 182-257 275-360 (399)
252 TIGR01796 CM_mono_aroH monofun 41.9 65 0.0014 28.6 5.5 52 190-245 24-78 (117)
253 PRK07910 3-oxoacyl-(acyl carri 40.6 54 0.0012 35.4 5.9 44 189-232 289-333 (418)
254 PRK09585 anmK anhydro-N-acetyl 40.6 80 0.0017 33.6 7.0 60 174-233 59-126 (365)
255 PF07736 CM_1: Chorismate muta 40.5 66 0.0014 28.7 5.3 51 189-243 23-76 (118)
256 PRK12404 stage V sporulation p 40.4 1.4E+02 0.0029 31.5 8.4 99 173-276 196-310 (334)
257 PRK06066 acetyl-CoA acetyltran 40.1 1.1E+02 0.0023 32.9 7.9 40 189-233 259-301 (385)
258 PRK08142 acetyl-CoA acetyltran 39.6 1E+02 0.0022 32.9 7.8 24 189-212 258-281 (388)
259 PF00195 Chal_sti_synt_N: Chal 39.1 1.5E+02 0.0033 29.4 8.2 69 403-477 118-190 (226)
260 PLN02836 3-oxoacyl-[acyl-carri 38.8 1.4E+02 0.0031 32.3 8.9 43 189-231 302-345 (437)
261 PRK06157 acetyl-CoA acetyltran 38.7 1.4E+02 0.0031 31.9 8.7 41 189-234 269-312 (398)
262 KOG1389 3-oxoacyl CoA thiolase 37.1 75 0.0016 33.1 5.8 69 190-263 324-399 (435)
263 KOG1202 Animal-type fatty acid 33.7 64 0.0014 39.4 5.2 123 186-309 89-247 (2376)
264 COG2518 Pcm Protein-L-isoaspar 32.9 44 0.00095 32.8 3.3 38 444-483 51-88 (209)
265 PRK08304 stage V sporulation p 32.7 1.8E+02 0.0039 30.6 8.0 99 173-276 198-312 (337)
266 KOG4490 Translocon-associated 31.4 76 0.0016 29.2 4.3 18 1-18 1-18 (183)
267 KOG1406 Peroxisomal 3-ketoacyl 30.1 49 0.0011 33.6 3.1 28 185-212 271-298 (408)
268 TIGR02845 spore_V_AD stage V s 30.0 2.4E+02 0.0052 29.6 8.3 99 173-276 192-305 (327)
269 PRK13410 molecular chaperone D 27.6 1.9E+02 0.0041 33.4 7.8 77 175-255 298-374 (668)
270 TIGR02435 CobG precorrin-3B sy 26.3 3.3E+02 0.0071 29.0 9.0 95 141-249 269-372 (390)
271 PRK08329 threonine synthase; V 25.2 65 0.0014 33.8 3.3 35 447-481 311-345 (347)
272 PF04241 DUF423: Protein of un 24.3 4.1E+02 0.009 22.1 7.4 27 32-58 16-42 (89)
273 COG2377 Predicted molecular ch 23.8 1.5E+02 0.0033 31.5 5.6 68 175-242 62-141 (371)
274 PRK07103 polyketide beta-ketoa 23.6 1.5E+02 0.0033 31.7 5.9 27 189-215 284-311 (410)
275 COG1153 FwdD Formylmethanofura 23.5 79 0.0017 28.2 2.9 52 450-508 31-88 (128)
276 TIGR02350 prok_dnaK chaperone 23.1 2.2E+02 0.0048 32.1 7.2 76 175-254 294-369 (595)
277 cd01453 vWA_transcription_fact 23.0 2.3E+02 0.005 26.7 6.3 65 204-275 47-117 (183)
278 CHL00094 dnaK heat shock prote 22.3 2.7E+02 0.0058 31.7 7.8 45 188-233 311-355 (621)
279 PRK05183 hscA chaperone protei 22.3 3.2E+02 0.007 31.1 8.4 77 174-254 297-373 (616)
280 KOG1394 3-oxoacyl-(acyl-carrie 21.9 1E+02 0.0022 32.9 3.7 27 189-215 304-331 (440)
281 PRK13411 molecular chaperone D 21.9 2.5E+02 0.0054 32.2 7.4 56 176-232 298-353 (653)
282 KOG1391 Acetyl-CoA acetyltrans 21.0 1.2E+02 0.0025 30.9 3.9 49 189-243 296-344 (396)
283 PF09663 Amido_AtzD_TrzD: Amid 21.0 2.8E+02 0.006 29.3 6.7 69 185-259 131-202 (365)
284 PTZ00009 heat shock 70 kDa pro 20.8 2.9E+02 0.0063 31.7 7.6 65 188-255 315-379 (653)
285 PRK00290 dnaK molecular chaper 20.0 3.5E+02 0.0076 30.8 8.1 76 175-254 296-371 (627)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.3e-120 Score=973.33 Aligned_cols=499 Identities=69% Similarity=1.183 Sum_probs=478.7
Q ss_pred cccccCCCCccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccChhhHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 009966 20 EPKQKNLPNFFVSIKLKYVKLGYHYLISNALYLLLVPLLCILLTHLSTLTVDDFIQLWNELRFNFLTLLACLVSLVFIST 99 (521)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (521)
+++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|+..+|..+++++++++.++++++++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (511)
T PLN02192 13 PSSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLVFLST 92 (511)
T ss_pred cchhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999999988899999999999988998888889998888888889999
Q ss_pred HHHHcCCCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHH
Q 009966 100 IYLMSRPRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMAL 179 (521)
Q Consensus 100 ~~~~~r~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~ 179 (521)
+|+|+||++||++||+||+|+++++++.+.++|+....|.|++++++||+|++++||+|++||+|+..+..| +..+|++
T Consensus 93 ~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~-~~~~~~~ 171 (511)
T PLN02192 93 LYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVP-PNPCMAE 171 (511)
T ss_pred HHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCC-CCccHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 7789999
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHH
Q 009966 180 AMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRL 259 (521)
Q Consensus 180 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~l 259 (521)
+|+|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++||++|+++
T Consensus 172 ~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~l 251 (511)
T PLN02192 172 ARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHL 251 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecc
Q 009966 260 LQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQ 339 (521)
Q Consensus 260 L~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ 339 (521)
|+++++++||||++|++|.+||.++||+++++|++|||||||+||++++.++++++|+|.+.++++.++|++.|+|++++
T Consensus 252 L~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~ 331 (511)
T PLN02192 252 LQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQE 331 (511)
T ss_pred HHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceecc
Confidence 99999999999999999999999999999999999999999999999765555678999999999999999999999999
Q ss_pred cCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHH
Q 009966 340 EDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAV 419 (521)
Q Consensus 340 ~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~v 419 (521)
+|++|+.|+.|+||+|.++|++++.|++++||+++|.+|+.++++.|+++++|+.+++.|+|+++.+|||||+||+|+++
T Consensus 332 ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr~I 411 (511)
T PLN02192 332 EDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAV 411 (511)
T ss_pred cccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCHHH
Confidence 99999999999999999999999999999999999999999988899999999999998999999999999999999999
Q ss_pred HHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEEeccCCCCCCC
Q 009966 420 LDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTINPAHEK 499 (521)
Q Consensus 420 i~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~~~~~~~~~~~ 499 (521)
+|.++++||++++++++|+++|+|||||||||+||+|++++++|++|+||+|||+|||+||+||++||||+|++++..+.
T Consensus 412 Id~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~~ 491 (511)
T PLN02192 412 LDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEK 491 (511)
T ss_pred HHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876424
Q ss_pred CCcccccccCCCCCCCCCCC
Q 009966 500 NPWMDEIDNFPVHVPEVIPI 519 (521)
Q Consensus 500 ~~w~~~i~~~p~~~~~~~~~ 519 (521)
|||+||||+|||++|.++.|
T Consensus 492 ~~w~~~i~~yp~~~~~~~~~ 511 (511)
T PLN02192 492 NPWMDEIHEFPVDVPKVSTI 511 (511)
T ss_pred CCchhhHHhCCCCCCCCCCC
Confidence 99999999999999987654
No 2
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.8e-117 Score=951.10 Aligned_cols=497 Identities=61% Similarity=1.045 Sum_probs=472.7
Q ss_pred cCCcccccCCCCccccccchhhhhhhHHHHHHH---HHHHHHHHHHHHHHHhcccChhhHHHHHHH--hhhhHHHHHHHH
Q 009966 17 LQNEPKQKNLPNFFVSIKLKYVKLGYHYLISNA---LYLLLVPLLCILLTHLSTLTVDDFIQLWNE--LRFNFLTLLACL 91 (521)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 91 (521)
...+++|++||||++|+|+||||+||||+++|+ ++++++|++++++.++.+++++|+..+|.. ++++++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (521)
T PLN02854 17 SAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLTIATLVQITGLEFDTVSELWSNQALHLDTATRLTGS 96 (521)
T ss_pred ceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhHHhHHHHHHHH
Confidence 344588999999999999999999999999999 677899998888999999999999889987 888899999998
Q ss_pred HHHHHHHHHHHHcCCCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCC
Q 009966 92 VSLVFISTIYLMSRPRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNP 171 (521)
Q Consensus 92 ~~~~~~~~~~~~~r~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p 171 (521)
+++++++++|+|+||++||++||+||+|+++++++.+.++|+....|.|++++++||+||+++||+|++||+|+..+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~ 176 (521)
T PLN02854 97 AFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRP 176 (521)
T ss_pred HHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHH
Q 009966 172 LDNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLI 251 (521)
Q Consensus 172 ~~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~ 251 (521)
+..+|+++|+|++++++.|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++
T Consensus 177 -~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~ 255 (521)
T PLN02854 177 -PNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLI 255 (521)
T ss_pred -CcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHH
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCC
Q 009966 252 SIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDK 331 (521)
Q Consensus 252 AL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~ 331 (521)
||++|+++|+++++++||||++|.+|.+||.++||++++++++|||||||+||++++.++++++|+|.+++++++++|++
T Consensus 256 aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~ 335 (521)
T PLN02854 256 SIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDK 335 (521)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCC
Confidence 99999999999999999999999999999999999999999999999999999997644456789999999999999999
Q ss_pred cccceecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEE
Q 009966 332 SYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFC 411 (521)
Q Consensus 332 ~~~~v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~ 411 (521)
.|+|+++++|+.|..|+++++|+|.+++++++.|++.+||.|+|++|+++|+...+.+.+.+..+++|+|+|+.||||||
T Consensus 336 ~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~ 415 (521)
T PLN02854 336 NYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFC 415 (521)
T ss_pred ccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEE
Confidence 99999999998888899999999999999999999999999999999999888887777777788888999999999999
Q ss_pred ecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEEec
Q 009966 412 IHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALR 491 (521)
Q Consensus 412 ~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~~~ 491 (521)
+||+|++++|.++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++||||+|
T Consensus 416 iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~ 495 (521)
T PLN02854 416 IHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALR 495 (521)
T ss_pred ECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC--CCCCCcccccccCCCCCCC
Q 009966 492 TINPA--HEKNPWMDEIDNFPVHVPE 515 (521)
Q Consensus 492 ~~~~~--~~~~~w~~~i~~~p~~~~~ 515 (521)
++++. . .|||+||||+|||++|.
T Consensus 496 ~~~~~~~~-~~~w~~~i~~yp~~~~~ 520 (521)
T PLN02854 496 EIPTGEST-GNPWADSIDRYPVKVPV 520 (521)
T ss_pred cCCccccC-CCCchhhHhhCCCCCCC
Confidence 99865 5 69999999999999875
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.7e-115 Score=930.77 Aligned_cols=492 Identities=60% Similarity=1.035 Sum_probs=469.7
Q ss_pred cccccCCCCccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccChhhHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 009966 20 EPKQKNLPNFFVSIKLKYVKLGYHYLISNALYLLLVPLLCILLTHLSTLTVDDFIQLWNELRFNFLTLLACLVSLVFIST 99 (521)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (521)
+++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++.+|+..+|..++++++++++++++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (502)
T PLN02377 9 IHQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIIISIEASQMNPDDLRQLWIHLQYNLVSIIICSAFLVFGLT 88 (502)
T ss_pred EeehhhCchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57799999999999999999999999999999999999988899999999999988998888889898888888889999
Q ss_pred HHHHcCCCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHH
Q 009966 100 IYLMSRPRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMAL 179 (521)
Q Consensus 100 ~~~~~r~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~ 179 (521)
+|+|+||++||++||+||+|++++++|.+.++|+.+..|.|++++++|++||+++|||++++|.|+..+..| +..+|++
T Consensus 89 ~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~-~~~~~~~ 167 (502)
T PLN02377 89 VYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIP-PRPSMAA 167 (502)
T ss_pred HHHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCC-ccchHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999988888 7889999
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHH
Q 009966 180 AMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRL 259 (521)
Q Consensus 180 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~l 259 (521)
+++|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++||++|+++
T Consensus 168 ~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~l 247 (502)
T PLN02377 168 AREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDM 247 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecc
Q 009966 260 LQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQ 339 (521)
Q Consensus 260 L~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ 339 (521)
++++++++||||++|++|.+|+.+++++++++|++|||||||+||++++.++++++|++.++++++.++|++.|+|++++
T Consensus 248 l~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~ 327 (502)
T PLN02377 248 LQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQE 327 (502)
T ss_pred HHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeec
Confidence 99999999999999999999988888899999999999999999999765555678999999999999999999999999
Q ss_pred cCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHH
Q 009966 340 EDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAV 419 (521)
Q Consensus 340 ~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~v 419 (521)
+|+.|..|+++++|+|.++|++++.|++++||.|+|.+|++.++.....+++++..++++.|++++||||||+||+|+++
T Consensus 328 ~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqggr~I 407 (502)
T PLN02377 328 QDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGGRAV 407 (502)
T ss_pred cccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCCHHH
Confidence 99888899999999999999999999999999999999999988877778888877888888999999999999999999
Q ss_pred HHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEEeccCCCCCCC
Q 009966 420 LDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTINPAHEK 499 (521)
Q Consensus 420 i~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~~~~~~~~~~~ 499 (521)
+++++++||++++++++|++++++||||||||+||+|++++++|++++||+||++|||+||+|+++||||+|+++++. .
T Consensus 408 Id~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~~-~ 486 (502)
T PLN02377 408 IDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPSN-N 486 (502)
T ss_pred HHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998876 7
Q ss_pred CCcccccccCCCCC
Q 009966 500 NPWMDEIDNFPVHV 513 (521)
Q Consensus 500 ~~w~~~i~~~p~~~ 513 (521)
|||+||||+|||++
T Consensus 487 ~~w~~~i~~yp~~~ 500 (502)
T PLN02377 487 SPWEDCIDKYPVKL 500 (502)
T ss_pred CCchhhHhhCCCcc
Confidence 99999999999964
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.2e-108 Score=878.31 Aligned_cols=469 Identities=56% Similarity=0.938 Sum_probs=447.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccChhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEeEEeCCCC
Q 009966 43 HYLISNALYLLLVPLLCILLTHLSTLTVDDFIQLWNELRFNFLTLLACLVSLVFISTIYLMSRPRTVYLVNFACYKPDPS 122 (521)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~g~~lP~~~ 122 (521)
.|+++|+++++++|++++++.++.+++.+++..+|..++.++++++.+++++++++++|+|+||++||++||+||+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p~~~ 81 (478)
T PLN02932 2 NYLMAHRFKLCFLPLMVGIAMEASRLSTQDLQNFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSH 81 (478)
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecCccc
Confidence 57899999999999998889999999999988899888888889888888888999999999999999999999999999
Q ss_pred ceeehHHHHHHHhhc---CCCCHHH---HHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHHHHHHHHHHH
Q 009966 123 EMCSAERLFRMAAKN---GYFTEES---LAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAVIVGAIDELL 196 (521)
Q Consensus 123 ~~v~~~~~~e~~~~~---~~~~~~~---~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l~~~Aa~~aL 196 (521)
+++|.+.++|+.... |.|++++ ++||+||++||||++|||+|+..+..| +..+|+.+++|+++++++|+++||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~-~~~~~~~~~~ea~~la~~Aa~~aL 160 (478)
T PLN02932 82 LKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLP-LQQNLAVSRKETEEVIIGAVDNLF 160 (478)
T ss_pred ccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCC-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999766 7898887 999999999999999999999988888 888999999999999999999999
Q ss_pred HHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccC
Q 009966 197 AKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENI 276 (521)
Q Consensus 197 ~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~ 276 (521)
+++|++|+|||+||++|++++++||++++|+++||+++++.+|||+||||+|+++||++|+++++++++++||||++|.+
T Consensus 161 ~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~ 240 (478)
T PLN02932 161 RNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENI 240 (478)
T ss_pred HHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeec
Confidence 99999999999999999988899999999999999998999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCcccccccccchhHHH
Q 009966 277 TMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMA 356 (521)
Q Consensus 277 s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~~g~~ls~dl~~ 356 (521)
|.+||.+++|++++++++|||||||+||++++.++++++|+|.++++++.++|++.|+|+++++|++|..|+.|+|++|.
T Consensus 241 S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~ 320 (478)
T PLN02932 241 TQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPM 320 (478)
T ss_pred ccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccchH
Confidence 99999888899999999999999999999977544467899999999999999999999999999889899999999999
Q ss_pred HHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHHHHcCCCcccccc
Q 009966 357 IAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEP 436 (521)
Q Consensus 357 v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~ 436 (521)
+++++++.||+++||.|+|++|+++++++++++++++.+++.+.|+++++|||||+||+|++++|+++++||++++++|+
T Consensus 321 ~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~ 400 (478)
T PLN02932 321 VAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEA 400 (478)
T ss_pred HHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHH
Confidence 99999999999999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred hhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEEeccCCCCCCCCCcccccccCCCCC
Q 009966 437 SRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTINPAHEKNPWMDEIDNFPVHV 513 (521)
Q Consensus 437 S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~~~~~~~~~~~~~w~~~i~~~p~~~ 513 (521)
|+++|+|||||||||+||+|++++++|++|+||+||++|||+||+||++|||++|++++.. .|||+||||+|||++
T Consensus 401 s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~-~~~w~~~i~~yp~~~ 476 (478)
T PLN02932 401 SRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSA-NNPWEDCLHKYPVEI 476 (478)
T ss_pred HHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcC-CCCchhhHhhCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998876 799999999999975
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.7e-99 Score=798.00 Aligned_cols=430 Identities=55% Similarity=0.981 Sum_probs=404.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEe
Q 009966 83 NFLTLLACLVSLVFISTIYLMSRPRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSG 162 (521)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~ 162 (521)
.+..+-+.+.++++++++|+++||++||++||+||+|++++++|.+.++|+....+.|++++++||+||.++|||++++|
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~ 113 (466)
T PLN00415 34 SPFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTY 113 (466)
T ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCee
Confidence 34434444455566678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEec
Q 009966 163 GPKSLFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLG 242 (521)
Q Consensus 163 ~~~~~~~~p~~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~ 242 (521)
.|+..+..| +..+|+++++|+++.++.|++++|+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+
T Consensus 114 ~p~~~~~~~-~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~ 192 (466)
T PLN00415 114 SPRCMLTSP-PTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLS 192 (466)
T ss_pred eCCccccCC-CCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEec
Confidence 999988887 6779999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEE
Q 009966 243 GMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTL 322 (521)
Q Consensus 243 gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v 322 (521)
||||+|+++||++|+++++++++++||||++|.+|.+||+++|++++++|++|||||||+||++++.++++++|+|.+++
T Consensus 193 gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v 272 (466)
T PLN00415 193 GMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIV 272 (466)
T ss_pred cccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEE
Confidence 99999999999999999999999999999999999988899999999999999999999999998766556899999999
Q ss_pred eEEeccCCCcccceecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccC
Q 009966 323 RTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPD 402 (521)
Q Consensus 323 ~t~~~~d~~~~~~v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~ 402 (521)
+++...+++.|.|+++++|++|..|+.|+||+|.+++++++.|+++++|.++|++|++++.+..+.++.++...++|+|+
T Consensus 273 rt~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd 352 (466)
T PLN00415 273 RTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD 352 (466)
T ss_pred EecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCC
Confidence 99999888899999999999999999999999999999999999999999999999999998888999888778889999
Q ss_pred cccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHh
Q 009966 403 FKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKC 482 (521)
Q Consensus 403 ~~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~ 482 (521)
++..++|||+|+||++|+|+++++|||+++++++|+++|+|||||||+|+||+|+|+++++++++||++||+|||+||+|
T Consensus 353 ~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~ 432 (466)
T PLN00415 353 FKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKC 432 (466)
T ss_pred ccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchh
Confidence 98889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeEEeccCCCCCC--CCCcccccccCCCCC
Q 009966 483 NSAVWRALRTINPAHE--KNPWMDEIDNFPVHV 513 (521)
Q Consensus 483 ~s~v~r~~~~~~~~~~--~~~w~~~i~~~p~~~ 513 (521)
+++||||+|++++..+ .|||+||||+|||++
T Consensus 433 es~v~~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 433 NSIVWRALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred hHhHHHHhccCCcccccCCCCchhhHHhCCCCC
Confidence 9999999999987641 399999999999964
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=3.2e-77 Score=594.00 Aligned_cols=290 Identities=65% Similarity=1.041 Sum_probs=283.6
Q ss_pred HHHcCCCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHH
Q 009966 101 YLMSRPRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALA 180 (521)
Q Consensus 101 ~~~~r~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~ 180 (521)
|+|+||++||++||+||+|++++++|.+.++|+++..+.|++++++||+||+++|||+++||+|+..+..| +..+|.++
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p-~~~s~~~a 79 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIP-PDPSLAAA 79 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCC-CcccHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999888 78999999
Q ss_pred HHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHH
Q 009966 181 MKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLL 260 (521)
Q Consensus 181 ~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL 260 (521)
++|++++++.|++++|+++|++|+|||+||+|||.|+|+||+++||+|+|||++|+.+|||+||||||++++|++|+++|
T Consensus 80 ~~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL 159 (290)
T PF08392_consen 80 REEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLL 159 (290)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceeccc
Q 009966 261 QVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQE 340 (521)
Q Consensus 261 ~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~ 340 (521)
+.+|+.+||||++|++|.+||.|+||+|+++||||||||||+||||++.+++++||+|.|+||||+++||+.|+|++|+|
T Consensus 160 ~~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~e 239 (290)
T PF08392_consen 160 QAHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEE 239 (290)
T ss_pred HhCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeE
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred CcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHH
Q 009966 341 DESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKI 391 (521)
Q Consensus 341 d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v 391 (521)
|++|+.|++|+||++.++|+++|.||++|||+|||++|+++|.++++.||+
T Consensus 240 D~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk~ 290 (290)
T PF08392_consen 240 DEEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARKV 290 (290)
T ss_pred cCCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999998877663
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=3.2e-56 Score=454.16 Aligned_cols=311 Identities=23% Similarity=0.321 Sum_probs=264.4
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHH
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKA 186 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~ 186 (521)
.+++|.++|.|+|+ ++++|+++.+.... ++|| |..++||++||++.+++ ..++|+
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sdew------I~~rtGir~R~~a~~~e-----~~s~la-------- 56 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDT----SDEW------IETRTGIRERRIAADDE-----TTSDLA-------- 56 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCC----Ccce------eeeecCCceeeecCCCc-----cHHHHH--------
Confidence 46899999999999 99999999966654 6776 88999999999998877 778999
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
++|+++||+++|++|+|||+||++| +|+++.|++|++||++||+. ++.+||++ .+|+|+++||++|..++++|.+
T Consensus 57 --~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~ 132 (323)
T COG0332 57 --VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGY 132 (323)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999996 57999999999999999999 59999999 5999999999999999999999
Q ss_pred CeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCcccc
Q 009966 266 SYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKR 345 (521)
Q Consensus 266 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~ 345 (521)
++||||++|.+|+ +.+++||.+ ..+|||||+|+||++.+.+. +++.+.+++|+..+++++.+......
T Consensus 133 k~vLVVg~e~~S~-~ld~~dR~t---~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~ 200 (323)
T COG0332 133 KNVLVVGAETLSR-ILDWTDRDT---CVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT 200 (323)
T ss_pred CEEEEEehhHhhc-cCCHhhccc---eEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc
Confidence 9999999999998 678899975 47999999999999987332 56678899999998888776442111
Q ss_pred cccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhcccc----------ccCcccccCEEEeccc
Q 009966 346 IGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPY----------IPDFKLAFEHFCIHAG 415 (521)
Q Consensus 346 ~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~----------~~~~~~did~f~~H~~ 415 (521)
.+.... ..++.|.++++|+.+++.+ ....++|||||++||.
T Consensus 201 -----~~~~~~------------------------~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQa 251 (323)
T COG0332 201 -----PKEESG------------------------GGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQA 251 (323)
T ss_pred -----cccccc------------------------ccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccccc
Confidence 000000 0112234444444333221 1234689999999999
Q ss_pred CHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEEe
Q 009966 416 GRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRAL 490 (521)
Q Consensus 416 ~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~~ 490 (521)
|.++++.++++||++++++ ..++++|||||++|+|+.|+.+.++|++|+||+|++.+||+|++|+++++||.
T Consensus 252 n~ri~~~i~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 252 NLRIIEAIAKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred cHHHHHHHHHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 9999999999999999999 68999999999999999999999999999999999999999999999999984
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=8e-51 Score=429.05 Aligned_cols=349 Identities=19% Similarity=0.253 Sum_probs=273.3
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcCCC-CHHHHHH-HHHHHHHhCCccEEeCCCC----CCC------CCCCc
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYF-TEESLAF-QKKVVERSGIGKMSGGPKS----LFD------NPLDN 174 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~-~~~~~~f-~~ki~~~sGi~~r~~~~~~----~~~------~p~~~ 174 (521)
.+++|.++|+..|+ +.++++++.+.+.+...- +...++. +++|++++||++|+..-++ ++. .|...
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 56899999999999 999999999988754311 1122333 6779999999999975421 110 12134
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEE-EecCccchHHHHHH
Q 009966 175 KNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSY-NLGGMGCSAGLISI 253 (521)
Q Consensus 175 ~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~-dl~gmgCsg~l~AL 253 (521)
..+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++.++ +++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHH
Confidence 56778899999999999999999999999999999988766556999999999999999888664 555 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCCCCCCCCCC--ccccccccccccceeeEEEeccCCCc-cccccceeeEEeEE-eccC
Q 009966 254 DLARRLLQVTPDSYALVVSTENITMNWYGGND--RSMLLTNCLFRLGGAAILLSNRSSDR-RRAKYELLHTLRTH-KGAD 329 (521)
Q Consensus 254 ~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lFgDGAaAvLLs~~~~~~-~~~~~~L~~~v~t~-~~~d 329 (521)
++|++++++++.++||||++|.+|.++.+++| ++.++++++|||||+|+||++.+... .++.|++.+...+. ..++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 99999999999999999999999976665555 34567889999999999999865321 23456766653333 3455
Q ss_pred CCcccceecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCE
Q 009966 330 DKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEH 409 (521)
Q Consensus 330 ~~~~~~v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~ 409 (521)
+.....+.. .| +++.+++++|..+.+.++..+ +++++.. .....|+++
T Consensus 252 ~~~~~~i~~----~G-~~~~l~~~vp~~~~~~i~~~~----------------------~~~L~~~-----gl~~~di~~ 299 (393)
T PLN03172 252 GAIDGHLRE----VG-LTFHLLKDVPGLISKNIEKSL----------------------VEAFAPI-----GINDWNSIF 299 (393)
T ss_pred ccccceEEc----CC-cEEEEechHHHHHHHHHHHHH----------------------HHHhhhc-----CCCccccce
Confidence 443333322 12 456788999987765443322 1222211 111478999
Q ss_pred EEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHH----HcCCCCCC---CEEEEEEeChHHHh
Q 009966 410 FCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFE----AKGRIRKG---DRTWQIAFGSGFKC 482 (521)
Q Consensus 410 f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~----~~g~lk~G---D~VlliafGsG~~~ 482 (521)
|++||+|+++++.+++.||++++++.+|+++|++||||||+|+++.|+++. ++|++++| |+++++|||+||+|
T Consensus 300 ~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~ 379 (393)
T PLN03172 300 WIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTV 379 (393)
T ss_pred EEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCccee
Confidence 999999999999999999999999999999999999999999999999987 45788787 89999999999999
Q ss_pred hheeeEEe
Q 009966 483 NSAVWRAL 490 (521)
Q Consensus 483 ~s~v~r~~ 490 (521)
+++++||.
T Consensus 380 ~~~ll~~~ 387 (393)
T PLN03172 380 ETVVLHSV 387 (393)
T ss_pred eeeeeEec
Confidence 99999995
No 9
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=6.3e-51 Score=426.36 Aligned_cols=345 Identities=40% Similarity=0.622 Sum_probs=265.7
Q ss_pred eEEEEEeEEeCCCCceeehHHHHHHHhhcCC--CCHHHHHHHHHHHHHhCCccEEeCCC--CCCCC------CCCchhHH
Q 009966 109 VYLVNFACYKPDPSEMCSAERLFRMAAKNGY--FTEESLAFQKKVVERSGIGKMSGGPK--SLFDN------PLDNKNMA 178 (521)
Q Consensus 109 v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~ki~~~sGi~~r~~~~~--~~~~~------p~~~~~la 178 (521)
+||.+++.|+|+ ++++|+++.+++..... +.+...+..++|++++||.+|++..+ ++... |......+
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 689999999999 99999999998764211 01234556688999999999999865 22111 21345667
Q ss_pred HHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHH
Q 009966 179 LAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARR 258 (521)
Q Consensus 179 ~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~ 258 (521)
.+.+++.+|+.+|++++|+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 78899999999999999999999999999999998878899999999999999997899999997799999999999999
Q ss_pred HHhcCCCCeEEEEEeccCCCCCCCCCC-ccccccccccccceeeEEEeccCCCcc--ccccceeeEEeEEeccCCCcccc
Q 009966 259 LLQVTPDSYALVVSTENITMNWYGGND-RSMLLTNCLFRLGGAAILLSNRSSDRR--RAKYELLHTLRTHKGADDKSYNC 335 (521)
Q Consensus 259 lL~s~~~~~aLVVs~E~~s~~~~~~~d-r~~lv~~~lFgDGAaAvLLs~~~~~~~--~~~~~L~~~v~t~~~~d~~~~~~ 335 (521)
++++++.++||||++|..|. ++++.| +.+.+++++|||||+|+||++++.... ...+++.+...... .+. .+.
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~-p~~--~~~ 235 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLL-PDS--EDA 235 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceee-ecC--CCc
Confidence 99999999999999999988 666666 776667899999999999998764321 12344333211111 111 110
Q ss_pred eecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccc--cCcccccCEEEec
Q 009966 336 VSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYI--PDFKLAFEHFCIH 413 (521)
Q Consensus 336 v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~--~~~~~did~f~~H 413 (521)
+....+. ....+.++++++....+. ..++++..++. . +...+|||||++|
T Consensus 236 ~~~~~~~-~~~~~~~~~~v~~~~~~~--------------------------~~~~i~~~L~~-~~~g~~~~did~~~~H 287 (361)
T cd00831 236 MGWHLGE-EGLTFVLSRDVPRLVEKN--------------------------LERVLRKLLAR-LGIGLFKLAFDHWCVH 287 (361)
T ss_pred eEEEEEc-ceEEEEeChhHHHHHHHH--------------------------HHHHHHHHhcc-ccCCCccccceEEEEC
Confidence 0000000 111222333333221111 12222333332 2 3446899999999
Q ss_pred ccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheee
Q 009966 414 AGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVW 487 (521)
Q Consensus 414 ~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~ 487 (521)
|+|+++++.+++.||++++++++|+.++++||||||+|+|+.|++++++|++++||+|++++||+|++|++++|
T Consensus 288 ~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 288 PGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 99999999999999999999998899999999999999999999999999999999999999999999999987
No 10
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=4.6e-50 Score=423.20 Aligned_cols=351 Identities=19% Similarity=0.222 Sum_probs=264.2
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcCC--CCHHHHHHHHHHHHHhCCccEEeCCCCC----C------CCCCCc
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNGY--FTEESLAFQKKVVERSGIGKMSGGPKSL----F------DNPLDN 174 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~ki~~~sGi~~r~~~~~~~----~------~~p~~~ 174 (521)
.+.+|.++|+..|+ +.++++++.+.+..... -.++..+.++||++++||+.|+..-+++ + ..|...
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 56899999999999 99999999998876431 1223334478899999999999753211 1 011124
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCe-eEEEecCccchHHHHHH
Q 009966 175 KNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNI-LSYNLGGMGCSAGLISI 253 (521)
Q Consensus 175 ~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~gmgCsg~l~AL 253 (521)
..+..+.+++.+|+.+|+++||+++|++|+|||+||++|++.+..|+++++|+++||+++++ .++|++ +||+||+.||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 56778999999999999999999999999999999999766567999999999999999766 488888 7999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCCCCCCCCC--CccccccccccccceeeEEEeccCCCc-cccccceeeEEeEEec-cC
Q 009966 254 DLARRLLQVTPDSYALVVSTENITMNWYGGN--DRSMLLTNCLFRLGGAAILLSNRSSDR-RRAKYELLHTLRTHKG-AD 329 (521)
Q Consensus 254 ~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~--dr~~lv~~~lFgDGAaAvLLs~~~~~~-~~~~~~L~~~v~t~~~-~d 329 (521)
++|++++++++.++||||++|.+|.+|.... +.+.++++++|||||+|+||++++... .++.+++.....+... ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 9999999999999999999999998664332 234456789999999999999865321 1122333322112111 22
Q ss_pred CCcccceecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCE
Q 009966 330 DKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEH 409 (521)
Q Consensus 330 ~~~~~~v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~ 409 (521)
+.. .... ++.| +.+.+++++|.+..+.++. +++..++. ......|+++
T Consensus 251 ~~~--~~~~--~~~g-~~~~l~~~vp~~i~~~~~~--------------------------~l~~~l~~-~~~~~~d~~~ 298 (389)
T PLN03168 251 GAI--DGHL--TEAG-LIFHLMKDVPGLISKNIEK--------------------------FLNEARKC-VGSPDWNEMF 298 (389)
T ss_pred Ccc--CceE--ecCc-eEEEECHHHHHHHHHHHHH--------------------------HHHHHHHh-cCCCccccce
Confidence 211 1011 1112 3455677777665433221 11111111 1111357789
Q ss_pred EEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCC--------CEEEEEEeChHHH
Q 009966 410 FCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKG--------DRTWQIAFGSGFK 481 (521)
Q Consensus 410 f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~G--------D~VlliafGsG~~ 481 (521)
|++||+|+++++.+++.|||+++++..|+.++++||||||+|+++.|++++++ ++++| |+++++|||+||+
T Consensus 299 ~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t 377 (389)
T PLN03168 299 WAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLT 377 (389)
T ss_pred EEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhh
Confidence 99999999999999999999999999899999999999999999999998865 66665 8999999999999
Q ss_pred hhheeeEEeccC
Q 009966 482 CNSAVWRALRTI 493 (521)
Q Consensus 482 ~~s~v~r~~~~~ 493 (521)
|+++++||..++
T Consensus 378 ~~~~llr~~~~~ 389 (389)
T PLN03168 378 LEVLVLRAAANV 389 (389)
T ss_pred hhhhhheecccC
Confidence 999999997653
No 11
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.5e-49 Score=419.86 Aligned_cols=353 Identities=19% Similarity=0.283 Sum_probs=262.5
Q ss_pred HcCCCceEEEEEeEEeCCCCceeehHHHHHHHhh-cCCCCHHHH-HHHHHHHHHhCCccEEeCCCCC--------C--CC
Q 009966 103 MSRPRTVYLVNFACYKPDPSEMCSAERLFRMAAK-NGYFTEESL-AFQKKVVERSGIGKMSGGPKSL--------F--DN 170 (521)
Q Consensus 103 ~~r~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~-~~~~~~~~~-~f~~ki~~~sGi~~r~~~~~~~--------~--~~ 170 (521)
.+.|.+++|+++|++.|+ +.++|+++.+.+.. .+. +++++ +.++||++++||++|+++.+++ . ..
T Consensus 16 ~~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 92 (391)
T PLN03169 16 AANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKC-DDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGT 92 (391)
T ss_pred cCCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcc-cCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCC
Confidence 456889999999999999 99999999986543 221 23333 3367899999999999874211 0 01
Q ss_pred CCCchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCe-eEEEecCccchHH
Q 009966 171 PLDNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNI-LSYNLGGMGCSAG 249 (521)
Q Consensus 171 p~~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~gmgCsg~ 249 (521)
|.....+..+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++ .++|++ +||+|+
T Consensus 93 ~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~ 171 (391)
T PLN03169 93 PTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGG 171 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHH
Confidence 112345556788999999999999999999999999999999888999999999999999998777 479999 699999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEEeccCCCCCCCCC-C-ccccccccccccceeeEEEeccCCCc-cccccceeeEEeEEe
Q 009966 250 LISIDLARRLLQVTPDSYALVVSTENITMNWYGGN-D-RSMLLTNCLFRLGGAAILLSNRSSDR-RRAKYELLHTLRTHK 326 (521)
Q Consensus 250 l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~-d-r~~lv~~~lFgDGAaAvLLs~~~~~~-~~~~~~L~~~v~t~~ 326 (521)
+.||++|.+++++++.++||||++|.+|.++.... + ....+++++|||||+|+||++++... ....+++........
T Consensus 172 ~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~i 251 (391)
T PLN03169 172 VAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFL 251 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEc
Confidence 99999999999999999999999999987554221 1 22344578999999999999865321 112233322111111
Q ss_pred ccCCCcccceecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccc
Q 009966 327 GADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLA 406 (521)
Q Consensus 327 ~~d~~~~~~v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~d 406 (521)
.++. +.+.......| +.+.+++++|..+.+.++.. .+++++.. +...+|
T Consensus 252 -p~~~--~~~~~~~~~~g-~~~~~g~~v~~~~~~~~~~~----------------------i~~~L~~~-----gl~~~d 300 (391)
T PLN03169 252 -PGTE--KTIDGRLTEEG-INFKLGRELPQKIEDNIEGF----------------------CKKLMKKA-----GLVEKD 300 (391)
T ss_pred -CCCc--cccCceecCCc-eEEEECcHHHHHHHHHHHHH----------------------HHHHHHHc-----CCCCCC
Confidence 1111 11100011112 23345666666543322111 12333221 112356
Q ss_pred cC--EEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCC---CCCEEEEEEeChHHH
Q 009966 407 FE--HFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIR---KGDRTWQIAFGSGFK 481 (521)
Q Consensus 407 id--~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk---~GD~VlliafGsG~~ 481 (521)
+| +|++||+|+++++.+++.||++++++.+|++++++||||||+|+|+.|++++++++++ +||++++++||+||+
T Consensus 301 id~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s 380 (391)
T PLN03169 301 YNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGIT 380 (391)
T ss_pred CCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHh
Confidence 77 9999999999999999999999999988889999999999999999999999888876 699999999999999
Q ss_pred hhheeeEEe
Q 009966 482 CNSAVWRAL 490 (521)
Q Consensus 482 ~~s~v~r~~ 490 (521)
|+++++|+.
T Consensus 381 ~~~~ll~~~ 389 (391)
T PLN03169 381 FEGILARNL 389 (391)
T ss_pred HHHHHHhhh
Confidence 999999985
No 12
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=1.8e-49 Score=418.53 Aligned_cols=352 Identities=20% Similarity=0.248 Sum_probs=269.8
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcCC--CCHHHHHHHHHHHHHhCCccEEeCCC-C---CC---CC---CCCc
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNGY--FTEESLAFQKKVVERSGIGKMSGGPK-S---LF---DN---PLDN 174 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~ki~~~sGi~~r~~~~~-~---~~---~~---p~~~ 174 (521)
.+++|.++|+..|+ +.++++++.+.+..... -.++..+.++||++++||+.|+..-+ + ++ .. |...
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 56899999999999 99999999998875431 12333334788999999999987532 1 11 10 2124
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009966 175 KNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISID 254 (521)
Q Consensus 175 ~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~ 254 (521)
..+..+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++..|+++||+++++..+.+.++||+|++.||+
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~ 172 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHH
Confidence 56778899999999999999999999999999999998766555899999999999999777655444489999999999
Q ss_pred HHHHHHhcCCCCeEEEEEeccCCCCCCCCCCc--cccccccccccceeeEEEeccCCCc-cccccceeeEEeEE-eccCC
Q 009966 255 LARRLLQVTPDSYALVVSTENITMNWYGGNDR--SMLLTNCLFRLGGAAILLSNRSSDR-RRAKYELLHTLRTH-KGADD 330 (521)
Q Consensus 255 lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr--~~lv~~~lFgDGAaAvLLs~~~~~~-~~~~~~L~~~v~t~-~~~d~ 330 (521)
+|++++++++.++||||++|.+|.+|++++|+ +.++++++|||||+|+||++.+... .++.|++.+...+. ..+++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~ 252 (391)
T PLN03173 173 LAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDG 252 (391)
T ss_pred HHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCcc
Confidence 99999999999999999999999767665553 4567789999999999999854321 12346665543322 24444
Q ss_pred CcccceecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEE
Q 009966 331 KSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHF 410 (521)
Q Consensus 331 ~~~~~v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f 410 (521)
.....+. ..| +.+.+++++|.++.+.++..+ +++++.. .....|+|+|
T Consensus 253 ~~~~~i~----~~G-~~~~l~~~vp~~~~~~~~~~i----------------------~~~L~~~-----gl~~~di~~~ 300 (391)
T PLN03173 253 AIDGHLR----EVG-LTFHLLKDVPGLISKNVEKSL----------------------TEAFKPL-----GISDWNSLFW 300 (391)
T ss_pred ceeeEEE----cCc-eEEEEecHHHHHHHHHHHHHH----------------------HHHHHhc-----CCCccccCeE
Confidence 3222221 112 456778888887654433222 2233221 1124799999
Q ss_pred EecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHc----CCCCCC---CEEEEEEeChHHHhh
Q 009966 411 CIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAK----GRIRKG---DRTWQIAFGSGFKCN 483 (521)
Q Consensus 411 ~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~----g~lk~G---D~VlliafGsG~~~~ 483 (521)
++||+|+++++.+++.|||+++++.+|++++++||||||+|+|+.|++++++ |.+++| ++++++|||+||+++
T Consensus 301 v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e 380 (391)
T PLN03173 301 IAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVE 380 (391)
T ss_pred EECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHH
Confidence 9999999999999999999999999999999999999999999999999963 444443 889999999999999
Q ss_pred heeeEEecc
Q 009966 484 SAVWRALRT 492 (521)
Q Consensus 484 s~v~r~~~~ 492 (521)
+++++|..+
T Consensus 381 ~~ll~~~~~ 389 (391)
T PLN03173 381 TVVLHSVAP 389 (391)
T ss_pred HHHHhhccC
Confidence 999998543
No 13
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=7.8e-49 Score=415.27 Aligned_cols=350 Identities=19% Similarity=0.252 Sum_probs=261.6
Q ss_pred CCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHH---HHHHHHHHHHHhCCccEEeCCCCC----------CCCCC
Q 009966 106 PRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEE---SLAFQKKVVERSGIGKMSGGPKSL----------FDNPL 172 (521)
Q Consensus 106 ~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~---~~~f~~ki~~~sGi~~r~~~~~~~----------~~~p~ 172 (521)
..+++|+++|+|.|+ ++++|+++.+++..... +++ ..+.+++|++++||++|+++.+++ ...|.
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATK-SDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhc-ccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 367999999999999 99999999998533110 122 223357899999999999986542 11222
Q ss_pred CchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCee-EEEecCccchHHHH
Q 009966 173 DNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNIL-SYNLGGMGCSAGLI 251 (521)
Q Consensus 173 ~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~-~~dl~gmgCsg~l~ 251 (521)
....+..+.+.+.+|+++|++++|+++|++|+|||+||++|++....|+++..|+++||++.++. ++++. +||+|+++
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 34567788999999999999999999999999999999997654458999999999999996653 56666 59999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccCCCCCCCCCCc---cccccccccccceeeEEEeccCCCccccccceeeEEeEEecc
Q 009966 252 SIDLARRLLQVTPDSYALVVSTENITMNWYGGNDR---SMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGA 328 (521)
Q Consensus 252 AL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr---~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~ 328 (521)
||++|.+|+++++.++||||++|.+|.. +++.|+ ..++++++|||||+|+||++.++..++..|++.... ...
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~-~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~---~~~ 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLL-FNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAA---QAI 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeccccc-cCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEee---eEE
Confidence 9999999999999999999999999984 344443 345567899999999999986643222345554432 222
Q ss_pred CCCcccceecccCcccccccccc-hhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhcccc----ccCc
Q 009966 329 DDKSYNCVSQQEDESKRIGVKIS-KDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPY----IPDF 403 (521)
Q Consensus 329 d~~~~~~v~~~~d~~G~~g~~ls-~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~----~~~~ 403 (521)
++..++.+....++.| +-..++ +++|....+.++. +++..+.+. ....
T Consensus 252 ~p~~~~~~~~~~~~~g-~~~~~~~~~vp~~i~~~l~~--------------------------~l~~~l~~~~~~~~g~~ 304 (399)
T PLN03171 252 IPESDDAINMHFTEGG-LDGNIGTRQVPGLIGDNIER--------------------------CLLDAFAPLLGGDGGAE 304 (399)
T ss_pred ecCCchheEEEEEcCC-ceEEECchhHHHHHHHHHHH--------------------------HHHHHHHhhcccccCCC
Confidence 3333333332111112 112344 6666655443322 111111110 0112
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCC--CCCC---CEEEEEEeCh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGR--IRKG---DRTWQIAFGS 478 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~--lk~G---D~VlliafGs 478 (521)
.+|++|+ +||+|+++++.+++.||++++++..|+.++++||||||+|+|+.|+++.++++ +++| |+|+++|||+
T Consensus 305 ~~di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~ 383 (399)
T PLN03171 305 WNDLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGP 383 (399)
T ss_pred cccceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcc
Confidence 4677765 69999999999999999999999888899999999999999999999988774 6888 9999999999
Q ss_pred HHHhhheeeEEec
Q 009966 479 GFKCNSAVWRALR 491 (521)
Q Consensus 479 G~~~~s~v~r~~~ 491 (521)
|++|++++|++.+
T Consensus 384 Glt~~~~ll~~~~ 396 (399)
T PLN03171 384 GLTVDAMLLHASG 396 (399)
T ss_pred cHHHHHHHhhccc
Confidence 9999999999865
No 14
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=2.1e-48 Score=411.91 Aligned_cols=351 Identities=19% Similarity=0.235 Sum_probs=267.5
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcCCC-C-HHHHHHHHHHHHHhCCccEEeCCCCC----C---C---CCCCc
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYF-T-EESLAFQKKVVERSGIGKMSGGPKSL----F---D---NPLDN 174 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~-~-~~~~~f~~ki~~~sGi~~r~~~~~~~----~---~---~p~~~ 174 (521)
.+.+|.++|+..|+ +.++++++.+.+.+...- + ++..+.++||++++||+.|+..-+++ + . .|...
T Consensus 19 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 45899999999999 999999999988764311 1 22233378899999999999754211 1 0 12124
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCe-eEEEecCccchHHHHHH
Q 009966 175 KNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNI-LSYNLGGMGCSAGLISI 253 (521)
Q Consensus 175 ~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~gmgCsg~l~AL 253 (521)
..+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++ .++|++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 56778899999999999999999999999999999998766556999999999999999766 478988 7999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCCCCCCCCCC--ccccccccccccceeeEEEeccCCCc-cccccceeeEEeEEeccCC
Q 009966 254 DLARRLLQVTPDSYALVVSTENITMNWYGGND--RSMLLTNCLFRLGGAAILLSNRSSDR-RRAKYELLHTLRTHKGADD 330 (521)
Q Consensus 254 ~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lFgDGAaAvLLs~~~~~~-~~~~~~L~~~v~t~~~~d~ 330 (521)
++|++++++++.++||||++|.+|.++..+.+ .+..+++++|||||+|+||++++... ..+.|++.... ..+..+.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~-~~~~p~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSAS-QTILPDS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeecc-ceEecCC
Confidence 99999999999999999999999986644432 23556778999999999999865421 11234444321 1112222
Q ss_pred CcccceecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEE
Q 009966 331 KSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHF 410 (521)
Q Consensus 331 ~~~~~v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f 410 (521)
+.+..... .+.| +.+.+++++|..+.+.++..+ +++++.. .....|+++|
T Consensus 255 ~~~~~~~i--~~~G-~~~~l~~~vp~~~~~~i~~~v----------------------~~~L~~~-----gl~~~di~~~ 304 (401)
T PLN03170 255 EGAIDGHL--REVG-LTFHLLKDVPGLISKNIERSL----------------------EEAFKPL-----GITDYNSIFW 304 (401)
T ss_pred cccccceE--EcCC-eEEEEehHHHHHHHHHHHHHH----------------------HHHHHhc-----CCCccccCeE
Confidence 11110001 1122 345667888877654332211 2233221 1114689999
Q ss_pred EecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHH----HcCCCCCC---CEEEEEEeChHHHhh
Q 009966 411 CIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFE----AKGRIRKG---DRTWQIAFGSGFKCN 483 (521)
Q Consensus 411 ~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~----~~g~lk~G---D~VlliafGsG~~~~ 483 (521)
++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |+++++|||+||+|+
T Consensus 305 v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~ 384 (401)
T PLN03170 305 VAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVE 384 (401)
T ss_pred EecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHH
Confidence 99999999999999999999999988999999999999999999999987 46888888 899999999999999
Q ss_pred heeeEEec
Q 009966 484 SAVWRALR 491 (521)
Q Consensus 484 s~v~r~~~ 491 (521)
++++||..
T Consensus 385 ~~ll~~~~ 392 (401)
T PLN03170 385 TVVLHSVP 392 (401)
T ss_pred hHHheecc
Confidence 99999954
No 15
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.3e-47 Score=395.62 Aligned_cols=323 Identities=17% Similarity=0.222 Sum_probs=248.3
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHH
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKA 186 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~ 186 (521)
.+++|+++|.|+|+ ++++++++.+..+. +++ ++.+++||.+|++.++++ +..+|+
T Consensus 2 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~e-----~~~~la-------- 56 (326)
T PRK05963 2 CSSRIAGFGHAVPD--RRVENAEIEAQLGL----ETG------WIERRTGIRCRRWAAPDE-----TLSDLA-------- 56 (326)
T ss_pred CccEEEEEEEECCC--CeecHHHHHHHcCC----CHH------HhhhccCCeEEEEcCCCC-----CHHHHH--------
Confidence 36899999999999 99999999987642 344 377899999999998776 778888
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
.+|+++||+++|++|+|||+||++| ++++..|+.+.+|+++||++ ++.+||+++ ||+|++.||++|.++++++ .
T Consensus 57 --~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~ 131 (326)
T PRK05963 57 --ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-G 131 (326)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-C
Confidence 9999999999999999999999986 46899999999999999998 689999996 9999999999999999987 4
Q ss_pred CeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCcccc
Q 009966 266 SYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKR 345 (521)
Q Consensus 266 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~ 345 (521)
++||||++|..+. +.++.++.. ..+|||||+|+||++++... . +++.+...+++..|+.+..+.++..
T Consensus 132 ~~aLVv~~d~~s~-~~~~~~~~~---~~lfGDgA~A~ll~~~~~~~----~---~~l~~~~~t~~~~~~~~~~~~gg~~- 199 (326)
T PRK05963 132 KPVLVVAANILSR-RINMAERAS---AVLFADAAGAVVLAPSAKAN----S---GVLGSQLISDGSHYDLIKIPAGGSA- 199 (326)
T ss_pred CeEEEEEechhhc-cCCccccCc---eEEEeecceEEEEEecCCCC----C---ceEEEEEEEcCCCCCeEEeCCCCcC-
Confidence 8999999999886 445555542 57999999999999866421 1 2334556677777776555433110
Q ss_pred cccccchhHHHHHHHhhhhhhhc-cCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHH
Q 009966 346 IGVKISKDLMAIAGEALKTNITT-LGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVE 424 (521)
Q Consensus 346 ~g~~ls~dl~~v~g~alk~ni~~-lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~ 424 (521)
.+.+.+... + ...+.. .|+ +.+.++.... .+.++..+++ .....+|||+|++||+|+++++.+.
T Consensus 200 --~~~~~~~~~---~--~~~~~~~~~~------~~~~~~~~~~-~~~~~~~L~~-~gl~~~did~~~~h~~~~~~~~~~~ 264 (326)
T PRK05963 200 --RPFAPERDA---S--EFLMTMQDGR------AVFTEAVRMM-SGASQNVLAS-AAMTPQDIDRFFPHQANARIVDKVC 264 (326)
T ss_pred --CCCcccccc---c--ccceEecCCH------HHHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHH
Confidence 011100000 0 000000 011 1111111111 1222222222 2333589999999999999999999
Q ss_pred HHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEE
Q 009966 425 KHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRA 489 (521)
Q Consensus 425 ~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~ 489 (521)
+.||++++++ ..++++||||+|+|++++|+++++++++++||+|++++||+|++|+++|+||
T Consensus 265 ~~l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 265 ETIGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred HHcCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 9999999998 5899999999999999999999999999999999999999999999999986
No 16
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.6e-47 Score=376.39 Aligned_cols=347 Identities=23% Similarity=0.286 Sum_probs=279.6
Q ss_pred eEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHH-HhCCccEEeCCCCCCC-CC-CCchhHHHHHHHhH
Q 009966 109 VYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVE-RSGIGKMSGGPKSLFD-NP-LDNKNMALAMKETK 185 (521)
Q Consensus 109 v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~-~sGi~~r~~~~~~~~~-~p-~~~~~la~~~~ea~ 185 (521)
.+|.++++++|+ +++++.|+.+.+..... .+ ..+-+.|.+. +.+|.+|+...|.+.+ .| .....+..+.||+.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~~-~~-~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELPF-QE-GREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhcc-cc-chHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 379999999999 99999888877765432 22 2444556666 6777777766443322 22 12245667899999
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
.+.++|+++||+.+++.|+|||+|+++++++..+||+.+.|+++||+++++..+.+.||||+|+..|+..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEeccCCCCCCCCCC-ccccccccccccceeeEEEeccCCCc--cccccceeeEEeEEeccCCCcccceecccCc
Q 009966 266 SYALVVSTENITMNWYGGND-RSMLLTNCLFRLGGAAILLSNRSSDR--RRAKYELLHTLRTHKGADDKSYNCVSQQEDE 342 (521)
Q Consensus 266 ~~aLVVs~E~~s~~~~~~~d-r~~lv~~~lFgDGAaAvLLs~~~~~~--~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~ 342 (521)
.+|||||.|.||.++....+ ++.+++..+||||+||+|++.+.... ...+..+.+.. .+...|++ +-|-..-++
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~-StL~~dse--~~Mgwdv~d 234 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSF-STLYPDSE--DIMGWDVGD 234 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccc-cccCCccc--cccceeecC
Confidence 99999999999997765544 45789999999999999999865422 22234343322 22333332 222222233
Q ss_pred ccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHH
Q 009966 343 SKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE 422 (521)
Q Consensus 343 ~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~ 422 (521)
+| ..+.+|+|+|.+....++.|++++ + -. -+...+||++|+.|+||++++++
T Consensus 235 ~G-~~~vlSrdlp~lIe~~l~~~V~~f--------------L-------~~------~~ls~~dI~~w~~HPGG~KVida 286 (356)
T COG3424 235 QG-LKVVLSRDLPNLIESYLAPNVTTF--------------L-------AT------HGLSIEDIEAWVVHPGGPKVIDA 286 (356)
T ss_pred Cc-EEEEEcCchhHHHHHHhhhhHHHH--------------H-------HH------cCCchhhhceeeeCCCCchHHHH
Confidence 34 567899999999888887776541 0 01 12346899999999999999999
Q ss_pred HHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEEec
Q 009966 423 VEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALR 491 (521)
Q Consensus 423 v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~~~ 491 (521)
+++.|||++|.++.|+..|.+|||+||++++|.|.+.++++ .++|.++++.|||+||+...++++|.+
T Consensus 287 ~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 287 YEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999999999999999999999999986 699999999999999999999999975
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2e-46 Score=391.34 Aligned_cols=334 Identities=16% Similarity=0.187 Sum_probs=245.7
Q ss_pred CCCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHh
Q 009966 105 RPRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKET 184 (521)
Q Consensus 105 r~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea 184 (521)
|.++++|+++|.|+|+ ++++++++.+.... ++.+ ..+|+.+.+||.+|+++.+++ ...+|+
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~~--~~~~i~~~~Gi~~R~~~~~~e-----~~~~la------ 64 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVFS----NDIK--TLKRMKKVIGLNTRYICDENT-----CVSDLG------ 64 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhcC----cchh--hhhhhhhccCceEEEeCCCCC-----CHHHHH------
Confidence 4577999999999999 99999975543211 2222 246788899999999998765 677888
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 185 KAVIVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
.+|+++||+++|++|+|||+||++| ++++..|+++.+|+++||+++++.+||++ .||+|++.||++|+++++++
T Consensus 65 ----~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~ 139 (353)
T PRK12880 65 ----KHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSG 139 (353)
T ss_pred ----HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999986 56999999999999999998889999998 59999999999999999999
Q ss_pred CCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCcc
Q 009966 264 PDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDES 343 (521)
Q Consensus 264 ~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~ 343 (521)
+.+ ||||++|.+|+ +.++.|+.. ..+|||||+|+||++++... .. ....+++..++.+..+.++.
T Consensus 140 ~~~-~LVv~~e~~S~-~~~~~d~~~---~~lFGDGAaA~vl~~~~~~~--------~~--~~~~~~~~~~~~~~~p~g~~ 204 (353)
T PRK12880 140 LGK-ILLICGDTLSK-FIHPKNMNL---APIFGDGVSATLIEKTDFNE--------AF--FELGSDGKYFDKLIIPKGAM 204 (353)
T ss_pred CCC-EEEEEehhhhc-cCCcccCCc---eeeecccceEEEEEecCCCC--------ce--EEEEecCCCCCeEEecCCCc
Confidence 888 99999999998 445566543 47999999999999755321 11 23567777788776664432
Q ss_pred cccccccchhHHHH-HHHhhh-hhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHH
Q 009966 344 KRIGVKISKDLMAI-AGEALK-TNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLD 421 (521)
Q Consensus 344 G~~g~~ls~dl~~v-~g~alk-~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~ 421 (521)
...+.....+-... .++..+ ..+...|+ +-+.+..... .++++..++. .+...+|||+|++||+|+++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~v~~~~~~~~-~~~i~~~L~~-~gl~~~did~~v~HQ~~~~i~~ 276 (353)
T PRK12880 205 RIPKADIFNDDSLMQTEEFRQLENLYMDGA------NIFNMALECE-PKSFKEILEF-SKVDEKDIAFHLFHQSNAYLVD 276 (353)
T ss_pred CCCccccccccccccccccccCceEEEcCH------HHHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHH
Confidence 11111110000000 000000 00000011 1111111111 1122222222 1233589999999999999999
Q ss_pred HHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEEec
Q 009966 422 EVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALR 491 (521)
Q Consensus 422 ~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~~~ 491 (521)
.+.+.||++++++. ..++++||||||+|+++.|+++.++|+++ +++++||+|++|+++++||.+
T Consensus 277 ~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~ 340 (353)
T PRK12880 277 CIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKD 340 (353)
T ss_pred HHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECC
Confidence 99999999999982 35689999999999999999999888764 999999999999999999943
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=3.5e-46 Score=393.19 Aligned_cols=332 Identities=19% Similarity=0.241 Sum_probs=244.3
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHH
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKA 186 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~ 186 (521)
++++|+++|.|+|+ ++++++++.+.++. +++ +|.+++||++|+++.+++ +..+|+
T Consensus 46 ~~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~~------~i~~~tGi~~R~~~~~~~-----~~~~La-------- 100 (379)
T PLN02326 46 SGSKLVGCGSAVPK--LLITNDDLSKLVDT----SDE------WIATRTGIRNRRVLSGDE-----TLTSLA-------- 100 (379)
T ss_pred CCcEEEEEEEECCC--ceecHHHHHHhcCC----chh------heecccCcceEeecCCCC-----CHHHHH--------
Confidence 46899999999999 99999999987652 343 378899999999987766 667887
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
.+|+++||+++|++|+|||.||++|+.....++.+..|+++||++ ++.+||++ +||+|++.||++|..++++++.+
T Consensus 101 --~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~ 176 (379)
T PLN02326 101 --VEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYK 176 (379)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999998764323446789999999998 79999999 59999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCccccc
Q 009966 267 YALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRI 346 (521)
Q Consensus 267 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~~ 346 (521)
+||||++|.+|. +.+++|+.. ..+|||||+|+||++++... .+ +..+.+.+++..++.+.....+....
T Consensus 177 ~vLVv~~e~~s~-~~~~~d~~~---~~lfGDGAaAvlL~~~~~~~----~~---i~~~~~~t~g~~~~~~~~~~~g~~~~ 245 (379)
T PLN02326 177 NVLVIGADALSR-YVDWTDRGT---CILFGDGAGAVVLQACDDDE----DG---LLGFDMHSDGNGHKHLHATFKGEDDD 245 (379)
T ss_pred EEEEEEechhcC-CCCccccCc---eEEEcceeEEEEEEEcCCCC----Cc---eEEEEEEEcCCCCCeEEecCCCCccc
Confidence 999999999887 456666654 35999999999999865421 11 22345556666555443321111000
Q ss_pred c-cccchhHHHHH-HHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHH
Q 009966 347 G-VKISKDLMAIA-GEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVE 424 (521)
Q Consensus 347 g-~~ls~dl~~v~-g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~ 424 (521)
+ ..-..+..... ...-..++...|+. .+.+.... ..++++..++. .....+|||||++||+|+++++.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~------v~~~~~~~-~~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~ 317 (379)
T PLN02326 246 SSGGNTNGVGDFPPKKASYSCIQMNGKE------VFKFAVRC-VPQVIESALQK-AGLTAESIDWLLLHQANQRIIDAVA 317 (379)
T ss_pred ccccccccccccccccccccceEecCHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHH
Confidence 0 00000000000 00000011111211 11111111 11222222222 1233579999999999999999999
Q ss_pred HHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEE
Q 009966 425 KHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRA 489 (521)
Q Consensus 425 ~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~ 489 (521)
+.||++++++ ..++++||||+|+|+|++|++++++|++++||+|++++||+||+|++++|+|
T Consensus 318 ~~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 318 QRLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 9999999998 4789999999999999999999999999999999999999999999999986
No 19
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=7.4e-45 Score=375.57 Aligned_cols=325 Identities=12% Similarity=0.147 Sum_probs=240.5
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHH
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKA 186 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~ 186 (521)
++++|.+++.|+|+ ++++++++.+..+. +++ ++.+++||.+|++.. ++ +..+|+
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~R~~~~-~~-----~~~~la-------- 56 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PEG------WVLKKSGVKTRHFVD-GE-----TSSYMG-------- 56 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CHh------HhhhccCceEEeecC-CC-----CHHHHH--------
Confidence 46899999999999 99999999887652 343 377899999999987 54 567777
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHcCCCC-CeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKLRG-NILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~-~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
.+|++++|+++|++|+|||+||+++ ++++..|+++..|+++||+++ ++.++|++ +||+|++.||++|..++++++
T Consensus 57 --~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~ 133 (329)
T PRK07204 57 --AEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGR 133 (329)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999986 467779999999999999985 47999999 599999999999999999999
Q ss_pred CCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCccc
Q 009966 265 DSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESK 344 (521)
Q Consensus 265 ~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G 344 (521)
.++||||++|..+. ..+..++.. ..+|||||+|+||++.+.. .++ +.++..+++..++....+..+.
T Consensus 134 ~~~~Lvv~~e~~s~-~~~~~~~~~---~~lfGDGAaA~ll~~~~~~-----~~i---l~~~~~t~~~~~~~~~~~~~~~- 200 (329)
T PRK07204 134 YKRVLIISSEISSV-GLNWGQNES---CILFGDGAAAVVITKGDHS-----SRI---LASHMETYSSGAHLSEIRGGGT- 200 (329)
T ss_pred CCEEEEEEeccccC-CCCcccCcc---eEEEecccEEEEEEEcCCC-----CcE---EEEEEEEecCCCCceEEecCCc-
Confidence 99999999999886 333444332 4789999999999986542 223 3344445544333221111100
Q ss_pred ccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHH
Q 009966 345 RIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVE 424 (521)
Q Consensus 345 ~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~ 424 (521)
..+-+.+.....+ .+ .+..-| +.+..+......++++..+++ .....+|||+|++||+|+.+++.++
T Consensus 201 --~~~~~~~~~~~~~-~~--~~~~~~-------~~~~~~~~~~~~~~i~~~L~~-~gl~~~did~~~~H~~~~~~~~~i~ 267 (329)
T PRK07204 201 --MIHPREYSEERKE-DF--LFDMNG-------RAIFKLSSKYLMKFIDKLLMD-AGYTLADIDLIVPHQASGPAMRLIR 267 (329)
T ss_pred --CCCCccccccccc-Cc--eEEECC-------HHHHHHHHHHHHHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHH
Confidence 0000000000000 00 000000 011001111112233333332 2334689999999999999999999
Q ss_pred HHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEE
Q 009966 425 KHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRA 489 (521)
Q Consensus 425 ~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~ 489 (521)
+.||++++++ ..++++||||+|+|++++|+++.++|++++||+|++++||+|++|+++++++
T Consensus 268 ~~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 268 KKLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HHcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 9999999998 6899999999999999999999999999999999999999999999999985
No 20
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=9.3e-45 Score=373.65 Aligned_cols=321 Identities=17% Similarity=0.247 Sum_probs=246.1
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHH
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKA 186 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~ 186 (521)
.+++|.++|.|+|+ ++++++|+.+..+. +++ ++.+++||.+|++.++++ +..+|+
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~~-----~~~~la-------- 57 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVEE-----YTSDLA-------- 57 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCCC-----CHHHHH--------
Confidence 56999999999999 99999999987542 344 378899999999997776 667887
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
.+|++++|+++|++|+|||.||++++ +++..|+.+.+|+++||++ ++.+++++ +||+|++.||++|.++|++++.
T Consensus 58 --~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~ 133 (325)
T PRK12879 58 --IKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLY 133 (325)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999864 6788999999999999998 58899999 5999999999999999999999
Q ss_pred CeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCcccc
Q 009966 266 SYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKR 345 (521)
Q Consensus 266 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~ 345 (521)
++||||++|.++. +.+..++.. .++|||||+|+||++++.. .+ +..+...++++.++.++.+..+
T Consensus 134 ~~~Lvv~~e~~s~-~~~~~~~~~---~~~~GDgAaA~ll~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~--- 198 (325)
T PRK12879 134 KKVLVIGAERLSK-VTDYTDRTT---CILFGDGAGAVVLEATENE-----PG---FIDYVLGTDGDGGDILYRTGLG--- 198 (325)
T ss_pred CEEEEEEehhhcC-cCCccccCc---eEEEeecceEEEEEecCCC-----CC---eEEEEEEEcCCCCCeEEEcCCC---
Confidence 9999999999886 334445543 3789999999999987643 12 3344566677666655443211
Q ss_pred cccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHHH
Q 009966 346 IGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEK 425 (521)
Q Consensus 346 ~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~~ 425 (521)
.....+.. . -...+...| .+.+.+.... ..++++..++. ....++|||+|++||+|+++++.+++
T Consensus 199 --~~~~~~~~-~----~~~~~~~~~------~~~~~~~~~~-~~~~i~~~L~~-~g~~~~did~~~~h~~~~~~~~~~~~ 263 (325)
T PRK12879 199 --TTMDRDAL-S----GDGYIVQNG------REVFKWAVRT-MPKGARQVLEK-AGLTKDDIDWVIPHQANLRIIESLCE 263 (325)
T ss_pred --CCCCcccc-c----cCccEEEcC------HHHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 11100000 0 000000000 0011111111 11222222222 12335899999999999999999999
Q ss_pred HcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEE
Q 009966 426 HLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRA 489 (521)
Q Consensus 426 ~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~ 489 (521)
.||++++++ ..++++||||+|+|+|+.|++++++|++++||+|++++||+|++++++++||
T Consensus 264 ~lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 264 KLGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred HcCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 999999998 4589999999999999999999999999999999999999999999999998
No 21
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=2.9e-45 Score=378.49 Aligned_cols=321 Identities=17% Similarity=0.264 Sum_probs=241.3
Q ss_pred ceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHH
Q 009966 108 TVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAV 187 (521)
Q Consensus 108 ~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l 187 (521)
.|+|+++|.|+|+ ++|+++|+.++++. +++ +|.+++||++|++.++++ +..+|+
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~-----~~~~la--------- 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SDH------WISTRTGIKKRHLAPSST-----SLTKLA--------- 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Chh------hEeeccCeEEEEeCCCCC-----CHHHHH---------
Confidence 5899999999999 99999999988752 233 477899999999987766 567777
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
.+|++++|+++|++|+|||.||++|+ ++.. +..+..++++||++ ++.+++++ +||++++.||++|.++++++..+
T Consensus 56 -~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~ 131 (326)
T CHL00203 56 -AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYK 131 (326)
T ss_pred -HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999875 4433 34578899999998 68899999 59999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCcccc-
Q 009966 267 YALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKR- 345 (521)
Q Consensus 267 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~- 345 (521)
++|||++|.+|. +.++.++. +..+|||||+|+||++.+.. .+ +.....+|++.++.+.....+...
T Consensus 132 ~~Lvv~~e~~s~-~~~~~~~~---~~~~fgDga~A~ll~~~~~~------~~---~~~~~~t~g~~~~~~~~~~~~~~~~ 198 (326)
T CHL00203 132 NILVVGADTLSK-WIDWSDRK---TCILFGDGAGAAIIGASYEN------SI---LGFKLCTDGKLNSHLQLMNKPVNNQ 198 (326)
T ss_pred EEEEEEehhhhC-cCCcccCC---ceEEEcceeeEEEEEEcCCC------Ce---EEEEEEEcCCCcceEEecCCCCCcc
Confidence 999999999987 45555553 25799999999999986542 12 223455666655543322110000
Q ss_pred -cccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHH
Q 009966 346 -IGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVE 424 (521)
Q Consensus 346 -~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~ 424 (521)
.+... .+. + .. ..+...|+. -+.+.... ..++++..+++ .+...+|||||++||+|+++++.++
T Consensus 199 ~~~~~~---~~~--~-~~-~~~~~~g~~------~~~~~~~~-~~~~i~~~L~~-~g~~~~did~~~~hq~~~~~~~~~~ 263 (326)
T CHL00203 199 SFGTTK---LPQ--G-QY-QSISMNGKE------VYKFAVFQ-VPAVIIKCLNA-LNISIDEVDWFILHQANKRILEAIA 263 (326)
T ss_pred cccccc---ccc--C-Cc-ceEEECCHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHH
Confidence 00000 000 0 00 001111111 11111111 12233333332 2334689999999999999999999
Q ss_pred HHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEE
Q 009966 425 KHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRA 489 (521)
Q Consensus 425 ~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~ 489 (521)
+.||++++++ ..++++||||+|+|+|+.|++++++|++++||+|++++||+|++|+++|+||
T Consensus 264 ~~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 264 NRLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred HHhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 9999999999 5799999999999999999999999999999999999999999999999998
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1e-44 Score=375.73 Aligned_cols=320 Identities=19% Similarity=0.198 Sum_probs=242.9
Q ss_pred CCceEEEEEeEEeCCCCceeehHHHHHHHhhcC---CCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHH
Q 009966 106 PRTVYLVNFACYKPDPSEMCSAERLFRMAAKNG---YFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMK 182 (521)
Q Consensus 106 ~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~---~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ 182 (521)
..+++|.++|.|+|+ ++++++++.+.+.... ..++ +++.+.+||++|++.++++ +..+|+
T Consensus 3 ~~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~~-----~~~~la---- 65 (338)
T PRK09258 3 YSNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEGT-----QLSDGA---- 65 (338)
T ss_pred ccceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCCC-----CHHHHH----
Confidence 467999999999999 9999999998764311 1122 2467789999999986654 566777
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHh
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQ 261 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~ 261 (521)
.+|++++|+++|++++|||.||++++ +++..|+++.+|+++||+++++.++|+++ ||+|++.||++|.++++
T Consensus 66 ------~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~ 138 (338)
T PRK09258 66 ------IAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIE 138 (338)
T ss_pred ------HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999864 68889999999999999987799999995 99999999999999999
Q ss_pred cCCCCeEEEEEeccCCCCCCCCC------Cc------cccccccccccceeeEEEeccCCCccccccceeeEEeEEeccC
Q 009966 262 VTPDSYALVVSTENITMNWYGGN------DR------SMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGAD 329 (521)
Q Consensus 262 s~~~~~aLVVs~E~~s~~~~~~~------dr------~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d 329 (521)
+++.++||||++|..+.. +++. +. ...+...+|||||+|+||++.+... ..+++.. ....++
T Consensus 139 ~g~~~~~Lvv~~e~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~---~~~~~~ 212 (338)
T PRK09258 139 LGQIDYALVVSGESAREI-VEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLG---GVTRAA 212 (338)
T ss_pred cCCCCEEEEEEecccchh-ccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeee---eeeecC
Confidence 999999999999998863 2211 11 1122357899999999999865321 1234333 333444
Q ss_pred CCcccceecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCE
Q 009966 330 DKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEH 409 (521)
Q Consensus 330 ~~~~~~v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~ 409 (521)
+..++.+ ... ...+..|.+.+.... ... ..++++..++. .....+|||+
T Consensus 213 ~~~~~~~-~~~------~~~~~~~~~~~~~~~----------------------~~~-~~~~~~~~L~~-~g~~~~did~ 261 (338)
T PRK09258 213 TEHHELC-QGG------RDGMRTDAVGLLKEG----------------------VEL-AVDTWEAFLAQ-LGWAVEQVDR 261 (338)
T ss_pred CCccccc-ccC------ccceEEcHHHHHHHH----------------------HHH-HHHHHHHHHHH-cCCCHHHCCE
Confidence 4443311 110 011222333222111 111 11222222222 1223579999
Q ss_pred EEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEE
Q 009966 410 FCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRA 489 (521)
Q Consensus 410 f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~ 489 (521)
|++||+|+++++.+++.||++++++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 262 ~i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 262 VICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred EecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 9999999999999999999999999 5688999999999999999999999999999999999999999999999986
No 23
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=9.8e-44 Score=368.80 Aligned_cols=328 Identities=18% Similarity=0.194 Sum_probs=244.5
Q ss_pred CCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhH
Q 009966 106 PRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETK 185 (521)
Q Consensus 106 ~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~ 185 (521)
|++|+|++++.|+|+ ++++++++.+..+. +++ ++.+++|+.+|+++++++ +..+|+
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~~-----~~~~la------- 57 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPED-----HTSDMA------- 57 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCCC-----CHHHHH-------
Confidence 568999999999999 99999999887652 344 366889999999987766 667888
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEecc--CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhc-
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSS--LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQV- 262 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss--~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s- 262 (521)
.+|++++|+++|++|+|||.||++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||.+|.+++++
T Consensus 58 ---~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~ 132 (339)
T PRK06840 58 ---IAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSD 132 (339)
T ss_pred ---HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcC
Confidence 99999999999999999999997743 4788999999999999998 78999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCc
Q 009966 263 TPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDE 342 (521)
Q Consensus 263 ~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~ 342 (521)
+..+++|||++|..+. +.+..++.... ...|||||+|+||++.+.. +++ +.+...+|++.++.+..+.++
T Consensus 133 g~~~~~Lvv~~~~~s~-~~~~~~~~~~~-~~~~GDgAaA~ll~~~~~~-----~~i---l~~~~~t~~~~~~~~~~~~~g 202 (339)
T PRK06840 133 PSIENVLLVGGYRNSD-LVDYDNPRTRF-MFNFAAGGSAALLKKDAGK-----NRI---LGSAIITDGSFSEDVRVPAGG 202 (339)
T ss_pred CCccEEEEEeeccccc-ccCcCCCCeee-eccCCCceeEEEEEecCCC-----Cce---EEEEEEEcCCccceEEecCCC
Confidence 6688999999999886 33333332210 1248999999999986542 333 345667777777665544322
Q ss_pred ccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHH----HHHHHHHHhhccccccCcccccCEEEecccCHH
Q 009966 343 SKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLT----LVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRA 418 (521)
Q Consensus 343 ~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~----~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~ 418 (521)
.. .+.+.+.... +. ..+...+|. .+...+. ....++++..+++ .....+|||+|++||+|++
T Consensus 203 ~~---~~~~~~~~~~-~~---~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~L~~-~gl~~~did~~~~h~~~~~ 268 (339)
T PRK06840 203 TK---QPASPETVEN-RQ---HYLDVIDPE------SMKERLDEVSIPNFLKVIREALRK-SGYTPKDIDYLAILHMKRS 268 (339)
T ss_pred cC---CCCccccccc-cc---ceEEEcCcH------HHHHHhHhhHHHHHHHHHHHHHHH-cCCCHHHCCEEEECCcCHH
Confidence 11 1111110000 00 000000110 0000000 0012223322222 2233589999999999999
Q ss_pred HHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEEe
Q 009966 419 VLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRAL 490 (521)
Q Consensus 419 vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~~ 490 (521)
+++.+++.||++++++ .++.+||||+|+|++++|++++++|++++||++++++||+|++|+++++||.
T Consensus 269 ~~~~~~~~Lgl~~~~~----~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 269 AHIALLEGLGLTEEQA----IYLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHHHHHcCCCHHHe----EeHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 9999999999999997 2689999999999999999999999999999999999999999999999984
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=2.6e-43 Score=361.47 Aligned_cols=319 Identities=21% Similarity=0.319 Sum_probs=244.4
Q ss_pred ceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHH
Q 009966 108 TVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAV 187 (521)
Q Consensus 108 ~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l 187 (521)
+++|.++++|+|+ ++++++++.+..+. +++ ++.+++|+++|+++++++ +..+|+
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~~------~~~~~~Gi~~r~~~~~~~-----~~~~la--------- 54 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SDE------WIRTRTGIRERRIADPGE-----TTSDLA--------- 54 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CHH------HhhhccCceEEeeCCCCC-----CHHHHH---------
Confidence 4799999999999 99999999988742 333 477899999999998765 667887
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.+++++++.+
T Consensus 55 -~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~ 131 (320)
T cd00830 55 -VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAK 131 (320)
T ss_pred -HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999864 5777899999999999998 79999999 59999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCccccc
Q 009966 267 YALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRI 346 (521)
Q Consensus 267 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~~ 346 (521)
++|||++|.++. +.++.++. ..++|||||+|+||++.+.. .++ +.++..++++.++.+..+..+...
T Consensus 132 ~vLvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i---~~~~~~~~~~~~~~~~~~~~~~~~- 198 (320)
T cd00830 132 NVLVVGAETLSR-ILDWTDRS---TAVLFGDGAGAVVLEATEED-----PGI---LDSVLGSDGSGADLLTIPAGGSRS- 198 (320)
T ss_pred EEEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEecCCC-----CcE---EEEEEEEcCCCCCeEEeCCCCcCC-
Confidence 999999999887 33334433 24799999999999987642 233 345566777777766554322110
Q ss_pred ccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHHHH
Q 009966 347 GVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKH 426 (521)
Q Consensus 347 g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~~~ 426 (521)
+. +.... -...+...++.+ ...+... .+++++..++. .+..++|||+|++||+++++++.+++.
T Consensus 199 --~~--~~~~~----~~~~~~~~~~~~------~~~~~~~-~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~ 262 (320)
T cd00830 199 --PF--EDAEG----GDPYLVMDGREV------FKFAVRL-MPESIEEALEK-AGLTPDDIDWFVPHQANLRIIEAVAKR 262 (320)
T ss_pred --cc--ccccc----cCccEEEcChHH------HHHHHHh-hHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 00 00000 000000011100 0011110 12223322222 233358999999999999999999999
Q ss_pred cCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheee
Q 009966 427 LKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVW 487 (521)
Q Consensus 427 Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~ 487 (521)
||++++++ ..++++|||++|+|++++|+++.++|++++||+|++++||+|++|+++++
T Consensus 263 lgl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 263 LGLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred hCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 99999998 57999999999999999999999999999999999999999999999875
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=3.6e-43 Score=361.02 Aligned_cols=313 Identities=20% Similarity=0.311 Sum_probs=245.4
Q ss_pred ceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHH
Q 009966 108 TVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAV 187 (521)
Q Consensus 108 ~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l 187 (521)
.++|.++++|+|+ ++++++++.+..+. +++ ++.+++|+.+|++..+++ +..+|+
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~-----~~~~la--------- 55 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SDE------WIVTRTGIKERRIAADDE-----TSSTMG--------- 55 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----chH------HeecccCceEEEECCCCC-----CHHHHH---------
Confidence 4899999999999 99999999987653 232 377889999999987776 667887
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
.+|++++|+++|++|+|||.+|++++ +++..|+.+.++++++|++ ++.+++++ +||++++.||++|.++++++..+
T Consensus 56 -~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~ 132 (318)
T TIGR00747 56 -FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYK 132 (318)
T ss_pred -HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999864 6778899999999999998 68999998 59999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCccc--
Q 009966 267 YALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESK-- 344 (521)
Q Consensus 267 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G-- 344 (521)
++|||++|..+. +.++.++.. ..+|||||+|+||++.+... + ++++...++++.++.++.+.++..
T Consensus 133 ~~Lvv~~e~~~~-~~~~~~~~~---~~~~GDGAaA~lL~~~~~~~-----~---i~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (318)
T TIGR00747 133 TVLVVGAEKLSS-TLDWTDRGT---CVLFGDGAGAVVLGESEDPG-----G---IISTHLGADGTQGEALYLPAGGRPTS 200 (318)
T ss_pred EEEEEEehhhcC-cCCcCCCCe---EEEEecceeEEEEeecCCCC-----c---EEEEEEEEcCCCcceEEECCCCcCCC
Confidence 999999999876 444455543 36899999999999876431 2 344566677777776655543211
Q ss_pred -ccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHH
Q 009966 345 -RIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEV 423 (521)
Q Consensus 345 -~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v 423 (521)
..++ +...++. .+..+... ..++++..++. ...-.+||+||++||+++++++.+
T Consensus 201 ~~~~~-----------------~~~~~~~------~~~~~~~~-~~~~~~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~ 255 (318)
T TIGR00747 201 GPSPF-----------------ITMEGNE------VFKHAVRK-MGDVVEETLEA-NGLDPEDIDWFVPHQANLRIIEAL 255 (318)
T ss_pred CCCCc-----------------eEECCHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHH
Confidence 0000 0000100 00011111 11122222221 122257999999999999999999
Q ss_pred HHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEE
Q 009966 424 EKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRA 489 (521)
Q Consensus 424 ~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~ 489 (521)
++.||++++++. .++++||||+|+|+++.|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 256 ~~~lgi~~~k~~---~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 256 AKRLELDMSQVV---KTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHHcCCCHHHee---ehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 999999999994 789999999999999999999999999999999999999999999999986
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.5e-41 Score=348.83 Aligned_cols=316 Identities=22% Similarity=0.317 Sum_probs=243.9
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHH
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKA 186 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~ 186 (521)
..|+|.++++|+|+ ++++++++.+..+. +++ +|.+++|+.+|+++.+++ +..+|+
T Consensus 2 ~~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~-----~~~~la-------- 56 (319)
T PRK09352 2 MYAKILGTGSYLPE--RVVTNDDLEKMVDT----SDE------WIVTRTGIKERRIAAPDE-----TTSDLA-------- 56 (319)
T ss_pred CceEEEEEEEECCC--eEEcHHHHHHHcCC----CHH------HhhhhcCeEEEEeCCCCC-----CHHHHH--------
Confidence 36899999999999 99999999987653 333 477889999999887665 566777
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
.+|++++|+++|++++|||.+|++++ ++...|+.+..|+.++|++ ++.+++++ ++|++++.||.+|.+++++++.
T Consensus 57 --~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~ 132 (319)
T PRK09352 57 --TEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAY 132 (319)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999865 5677899999999999996 78999999 5999999999999999999999
Q ss_pred CeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCcccc
Q 009966 266 SYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKR 345 (521)
Q Consensus 266 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~ 345 (521)
++|||+++|.++. ++...++.. ..+|||||+|+||++++.. + ++.++..++++.++.+..+.++...
T Consensus 133 ~~vLvv~~e~~s~-~~~~~~~~~---~~~~gDGaaA~ll~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (319)
T PRK09352 133 KNVLVIGAEKLSR-IVDWTDRST---CVLFGDGAGAVVLGASEEP------G---ILSTHLGSDGSYGDLLYLPGGGSRG 199 (319)
T ss_pred CEEEEEEehhhcc-ccCcccCCc---eEEEeccceEEEEEEcCCC------C---eEEEEEEEcCCCCCeEEeCCCCCCC
Confidence 9999999999886 444444443 3699999999999987642 1 2334555676666655444332110
Q ss_pred cccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHHH
Q 009966 346 IGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEK 425 (521)
Q Consensus 346 ~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~~ 425 (521)
+.+.. .+...|. +.+.++... ..++++..+++ .....+|||||++|++|+.+++.+++
T Consensus 200 ---~~~~~-----------~~~~~~~------~~~~~~~~~-~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~ 257 (319)
T PRK09352 200 ---PASPG-----------YLRMEGR------EVFKFAVRE-LAKVAREALEA-AGLTPEDIDWLVPHQANLRIIDATAK 257 (319)
T ss_pred ---CCCCC-----------ceEECCH------HHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 00000 0000000 001111111 12233333322 12235799999999999999999999
Q ss_pred HcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEE
Q 009966 426 HLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRA 489 (521)
Q Consensus 426 ~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~ 489 (521)
.||++.+++ ..++++|||++++|++++|++++++|++++||+|++++||+|++|+++++||
T Consensus 258 ~lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~ 318 (319)
T PRK09352 258 KLGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318 (319)
T ss_pred HhCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 999999998 5789999999999999999999999999999999999999999999999997
No 27
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=5.5e-42 Score=357.22 Aligned_cols=312 Identities=20% Similarity=0.222 Sum_probs=234.4
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHH
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKA 186 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~ 186 (521)
+.++|.++|.|+|+ ++++++++.+..+. +++ ++.+++||.+|+++++++ +..+|+
T Consensus 1 ~~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~~------~i~~~~Gi~~R~~~~~~~-----~~~~la-------- 55 (347)
T PRK04262 1 MMVGIVGYGAYIPR--YRIKVEEIARVWGD----DPE------AIKRGLGVEEKSVPGPDE-----DTATIA-------- 55 (347)
T ss_pred CceeEEEEEEeCCC--EEecHHHHHHHhCc----CHH------HHhhccCeeeeecCCCCc-----CHHHHH--------
Confidence 35899999999999 99999999988653 454 478899999999997776 677888
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
.+|++++|+++|++|+|||.||++| ++++..|+.+.+|+++||+++++.++|++ +||+|++.||++|.+++++++.
T Consensus 56 --~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~ 132 (347)
T PRK04262 56 --VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMI 132 (347)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999886 46788899999999999998678999998 5999999999999999999999
Q ss_pred CeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCcccc
Q 009966 266 SYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKR 345 (521)
Q Consensus 266 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~ 345 (521)
++||||++|... .++.++.. ..|||||+|+||++.+. ..++.+.. ...+|+ .+.+.........
T Consensus 133 ~~aLVv~~e~~~---~~~~~~~~----~~~GDGA~A~ll~~~~~-----~~~i~~~~--~~~~d~--~d~~~~~~~~~~~ 196 (347)
T PRK04262 133 KYALAIGADTAQ---GAPGDALE----YTAAAGGAAFIIGKEEV-----IAEIEATY--SYTTDT--PDFWRREGEPYPR 196 (347)
T ss_pred CEEEEEEEeeec---cCCCCCCC----CcCCCCcEEEEEecCcc-----cceeeccc--cccccc--hhhcCCCCCcCCC
Confidence 999999999842 23334332 46899999999997432 12333211 111222 1222111000000
Q ss_pred cccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHHH
Q 009966 346 IGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEK 425 (521)
Q Consensus 346 ~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~~ 425 (521)
.+..++++ + .++.. ..++++..++. .....+|||+|++||+|+++++.+++
T Consensus 197 ~~~~~~~~-~--------------------------~~~~~-~~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~~ 247 (347)
T PRK04262 197 HGGRFTGE-P--------------------------AYFKH-IISAAKGLMEK-LGLKPSDYDYAVFHQPNGKFPLRVAK 247 (347)
T ss_pred cCceecch-H--------------------------HHHHH-HHHHHHHHHHH-hCcCHHHhceeecCCCchHHHHHHHH
Confidence 00011110 0 00110 11222222222 12235899999999999999999999
Q ss_pred HcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEEeccCC
Q 009966 426 HLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTIN 494 (521)
Q Consensus 426 ~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~~~~~~ 494 (521)
.||++++++..+. ++++||||||+|+|++|+++.+ ++++||+|++++||+|+++.+++|++.+...
T Consensus 248 ~Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 248 MLGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred HcCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 9999999995433 6899999999999999999986 4899999999999999999999999976654
No 28
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.4e-41 Score=354.33 Aligned_cols=346 Identities=16% Similarity=0.148 Sum_probs=235.6
Q ss_pred ceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHH
Q 009966 108 TVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAV 187 (521)
Q Consensus 108 ~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l 187 (521)
+|+|.++|+|+|+ ++|+|+++.+.++......+ ...++|++++||.+|+++.++.....++..+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~La--------- 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEGRPTHSNAQMA--------- 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCCCCCCCHHHHH---------
Confidence 5899999999999 99999999988765321111 122579999999999997543210001334555
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
.+|+++||+++|++|+|||.||++| ++++..|+.+..|+++||++ ++.+++++ ++|+|++.||++|.+++++++.+
T Consensus 68 -~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~ 144 (378)
T PRK06816 68 -AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESR 144 (378)
T ss_pred -HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCC
Confidence 9999999999999999999999986 46788999999999999998 58899998 59999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCC------------cc--c----cccccccccceeeEEEeccCCCccccccceeeEEeEEecc
Q 009966 267 YALVVSTENITMNWYGGND------------RS--M----LLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGA 328 (521)
Q Consensus 267 ~aLVVs~E~~s~~~~~~~d------------r~--~----lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~ 328 (521)
+||||++|.+|..+ ++.+ +. . -..+++|||||+|+||++.+... +..+ ++......+
T Consensus 145 ~vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~ 219 (378)
T PRK06816 145 NAVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRS 219 (378)
T ss_pred EEEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeec
Confidence 99999999998733 2111 10 0 01135799999999999865421 1111 111112222
Q ss_pred CCCcccceecccCc---cc-ccccc-cchhHHHHHHH-hhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccC
Q 009966 329 DDKSYNCVSQQEDE---SK-RIGVK-ISKDLMAIAGE-ALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPD 402 (521)
Q Consensus 329 d~~~~~~v~~~~d~---~G-~~g~~-ls~dl~~v~g~-alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~ 402 (521)
+...++.+...... ++ ..++. .+.+-+...+. .++.+... -..++.. ...++++..++. ...
T Consensus 220 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~-~~~~~i~~~L~~-~gl 287 (378)
T PRK06816 220 YAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRL----------LNENIVV-YTIKPLLELVDK-RNL 287 (378)
T ss_pred ccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHH----------HHHHhHH-HHHHHHHHHHHH-cCC
Confidence 22222212111100 00 00000 01110000000 00000000 0000000 001122222222 123
Q ss_pred cccccCEEEecccCHHHHHHHHHHc-----CCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeC
Q 009966 403 FKLAFEHFCIHAGGRAVLDEVEKHL-----KLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFG 477 (521)
Q Consensus 403 ~~~did~f~~H~~~~~vi~~v~~~L-----gl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafG 477 (521)
..+|||+|++||+|.++++.+.+.| |++++++ ..++++||||+|||+|++|++++++|++++||+|++++.|
T Consensus 288 ~~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~ 364 (378)
T PRK06816 288 DPDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPE 364 (378)
T ss_pred ChhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEec
Confidence 3589999999999999999999987 8999998 6899999999999999999999999999999999999887
Q ss_pred hH-HHhhheeeEEe
Q 009966 478 SG-FKCNSAVWRAL 490 (521)
Q Consensus 478 sG-~~~~s~v~r~~ 490 (521)
+| |.++.+++.|.
T Consensus 365 s~~~~~~~~~~~~~ 378 (378)
T PRK06816 365 SGRFSTAFMLLTVV 378 (378)
T ss_pred ccchhheeEEEEEC
Confidence 77 99999999874
No 29
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=4.6e-41 Score=350.06 Aligned_cols=320 Identities=18% Similarity=0.202 Sum_probs=236.2
Q ss_pred eEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHHH
Q 009966 109 VYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAVI 188 (521)
Q Consensus 109 v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l~ 188 (521)
++|.++|.|+|+ ++++++++.+..+. ++++ +.+++||++|+++++++ +..+|+
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~~------i~~~~Gi~~r~v~~~~~-----~~~~la---------- 54 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPES------ISNGLPVEEKAVPGLDE-----DTATIG---------- 54 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHhH------eeeccceeeeecCCCCC-----CHHHHH----------
Confidence 679999999999 99999999887652 4554 67889999999998776 678888
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSY 267 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~ 267 (521)
.+|+++||+++|++|+|||.||++| ++++..|+.+..|+++||+++++.++|+++ ||+|++.||++|.++++++..++
T Consensus 55 ~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~-aC~g~~~al~~A~~~i~sg~~~~ 133 (345)
T TIGR00748 55 VEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEF-ACKAGTAGIQACMGLVASGMIKY 133 (345)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999986 467788999999999999976899999995 99999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCcccccc
Q 009966 268 ALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIG 347 (521)
Q Consensus 268 aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~~g 347 (521)
||||++|..+. .+.|+. ...|||||+|+||++.+.. .++.+.. ...+|+. +............+
T Consensus 134 vLVv~~d~~~~---~~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~--~~~~~~~~~~~~~~ 197 (345)
T TIGR00748 134 GLAIGADTAQG---APGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTP--DFWRREGEPYPRHG 197 (345)
T ss_pred EEEEEEeeccc---CCCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceecccc--cccccCCCcCCCcC
Confidence 99999999864 223432 2578999999999965421 1221211 1122221 11000000000000
Q ss_pred cccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHHHHc
Q 009966 348 VKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHL 427 (521)
Q Consensus 348 ~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~~~L 427 (521)
..... ..+-+.++... .+++++. .....+|||+|++||+|+++++.+.+.|
T Consensus 198 ~~~~~-----------------------~~~~~~~~~~~-~~~~L~~-----~gl~~~did~~i~Hq~~~~~~~~~~~~l 248 (345)
T TIGR00748 198 GRFTG-----------------------EPAYFHHVVTA-AKGLMEK-----LGLTPEDFDYAVFHQPNGKFYLVAARML 248 (345)
T ss_pred CeecC-----------------------hHHHHHHHHHH-HHHHHHH-----cCCCHHHcCEEEeCCCChHHHHHHHHHc
Confidence 00000 00001111111 1233332 1223579999999999999999999999
Q ss_pred CCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEEeccCCCCCCCCCcccccc
Q 009966 428 KLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTINPAHEKNPWMDEID 507 (521)
Q Consensus 428 gl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~~~~~~~~~~~~~w~~~i~ 507 (521)
|++++++..+ .+.++||||+|+|+|+.|+++++ ++++||+|++++||+|++|++++|+|.+..... .+|+--|+
T Consensus 249 gl~~ek~~~~-~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~~---~~~~~~~~ 322 (345)
T TIGR00748 249 GFPKEQVKPG-LLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEEK---RDLAPKVA 322 (345)
T ss_pred CCCHHHeecc-ccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHHH---hhhhhhHH
Confidence 9999998421 13489999999999999999986 689999999999999999999999998766533 36863343
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.1e-39 Score=338.57 Aligned_cols=349 Identities=16% Similarity=0.162 Sum_probs=233.4
Q ss_pred ceEEEEEeEEeCCCCceeehHHHHHHHhhcC-CCCHHH---H----------HHHHHHHHHhCCccEEeCCCC----CCC
Q 009966 108 TVYLVNFACYKPDPSEMCSAERLFRMAAKNG-YFTEES---L----------AFQKKVVERSGIGKMSGGPKS----LFD 169 (521)
Q Consensus 108 ~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~-~~~~~~---~----------~f~~ki~~~sGi~~r~~~~~~----~~~ 169 (521)
+|+|+++|+|+|+ ++++|+++.++++... .|..+. + ...++|.+++||.+|++..++ ...
T Consensus 2 ~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~ 79 (372)
T PRK07515 2 NVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDR 79 (372)
T ss_pred CcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccc
Confidence 5899999999999 9999999998864311 111000 0 013468889999999997532 100
Q ss_pred CC-CCchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccch
Q 009966 170 NP-LDNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCS 247 (521)
Q Consensus 170 ~p-~~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCs 247 (521)
.+ ............+.+|+..|++++|+++|++|+|||.||++|+ +++..|+.+.+|+++||++ ..+++++ ++|+
T Consensus 80 ~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aCa 156 (372)
T PRK07515 80 MRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VACS 156 (372)
T ss_pred cCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chhH
Confidence 00 0000011111234678899999999999999999999999875 5788999999999999996 5789998 6999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEec
Q 009966 248 AGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKG 327 (521)
Q Consensus 248 g~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~ 327 (521)
+++.||.+|.++++++..++||||++|.++. +.++.|+.. ..+|||||+|+||++.+....+..+++.+. ...
T Consensus 157 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~d~~~---~~lfGDgAaA~vL~~~~~~~~~~~~~il~~---~~~ 229 (372)
T PRK07515 157 SATFGIQTAANAIRSGSARRVLVVNPEICSG-HLNFRDRDS---HFIFGDVATAVIVERADTATSAGGFEILGT---RLF 229 (372)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeecccc-cccccCCCC---CEEecCccEEEEEeeccccccCCCceEEEE---Eee
Confidence 9999999999999999999999999999886 334455542 479999999999998654322234555442 222
Q ss_pred cCCCcccceecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCccccc
Q 009966 328 ADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAF 407 (521)
Q Consensus 328 ~d~~~~~~v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~di 407 (521)
++. .+.+..+. | .+.+...+-+.... ..+..-|+. .++++... ..++++..++. .....+||
T Consensus 230 ~~~--~~~~~~~~---G-~~~~~~~~~~~~~~----~~~~~~g~~------~~~~~~~~-~~~~i~~~L~~-~gl~~~dI 291 (372)
T PRK07515 230 TQF--SNNIRNNF---G-FLNRADPEGIGARD----KLFVQEGRK------VFKEVCPM-VAEHIVEHLAE-NGLTPADV 291 (372)
T ss_pred ccc--ccceecCC---C-CCCCCCcccccccc----ceEEeccHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHHC
Confidence 221 12211110 1 00000000000000 000000110 01111111 11223333322 22335899
Q ss_pred CEEEecccCHHHHHHHHHH-cCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhhee
Q 009966 408 EHFCIHAGGRAVLDEVEKH-LKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAV 486 (521)
Q Consensus 408 d~f~~H~~~~~vi~~v~~~-Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v 486 (521)
|+|++||+|.++++.+.+. ||++.+. +.++.++++||||||+|++++|+++. +++++||+|++++||+|++|++++
T Consensus 292 d~~~~Hq~~~~~~d~~~~~llg~~~~~-~~~~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~~~l 368 (372)
T PRK07515 292 KRFWLHQANINMNQLIGKKVLGRDATP-EEAPVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIGSVI 368 (372)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCCCh-hhceEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHHHHH
Confidence 9999999999999999988 6765432 22368999999999999999999874 578999999999999999999999
Q ss_pred eEE
Q 009966 487 WRA 489 (521)
Q Consensus 487 ~r~ 489 (521)
+|.
T Consensus 369 l~~ 371 (372)
T PRK07515 369 VRK 371 (372)
T ss_pred hcc
Confidence 874
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=4.3e-39 Score=330.78 Aligned_cols=321 Identities=22% Similarity=0.254 Sum_probs=235.8
Q ss_pred ceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHH
Q 009966 108 TVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAV 187 (521)
Q Consensus 108 ~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l 187 (521)
.|+|.++++|+|+ ++++++++.+..+. . ++..++|+++|++..+++ +..+|+
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~-----~~~~l~--------- 52 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDE-----DVPTMA--------- 52 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCC-----CHHHHH---------
Confidence 4789999999999 99999999887652 1 266779999999987654 567777
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
.+|++++|+++|++++|||.||++++ ++...|+.+.+|++++|++ ++.+++++ +||++++.||.+|.++++++..+
T Consensus 53 -~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~ 129 (324)
T cd00827 53 -VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWR 129 (324)
T ss_pred -HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999865 5566899999999999998 89999999 59999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCccccc
Q 009966 267 YALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRI 346 (521)
Q Consensus 267 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~~ 346 (521)
++|||++|.++.... ...+ ..++|||||+|+||++.+.. ..+++. .++..+++..+++.....+. + .
T Consensus 130 ~vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~---~~~~i~---~~~~~~~~~~~~~~~~~~~~-~-~ 196 (324)
T cd00827 130 YALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGI---LAAGIV---STHSTSDPGYDFSPYPVMDG-G-Y 196 (324)
T ss_pred EEEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCccc---ccCCce---eeeeecccccccCccceecc-C-C
Confidence 999999999886432 1222 24799999999999987642 123333 34555565543210000000 0 0
Q ss_pred ccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCH-HHHHHHHH
Q 009966 347 GVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGR-AVLDEVEK 425 (521)
Q Consensus 347 g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~-~vi~~v~~ 425 (521)
..+.. ......+..+ +.. .+-....... ..++++..+++ .... +||++|++||+|+ .+++.+++
T Consensus 197 ~~~~~----~~~~~~~~~~----~~~----~~~~~~~~~~-~~~~~~~~l~~-~~~~-~~i~~~~~h~~~~~~~~~~~~~ 261 (324)
T cd00827 197 PKPCK----LAYAIRLTAE----PAG----RAVFEAAHKL-IAKVVRKALDR-AGLS-EDIDYFVPHQPNGKKILEAVAK 261 (324)
T ss_pred Ccchh----hhhhcceeec----CCc----cchHHHHhHH-HHHHHHHHHHH-cccc-cccceeeccCchHHHHHHHHHH
Confidence 00000 0000000000 000 0000011111 12233333332 1112 6899999999999 99999999
Q ss_pred HcCCCcccccchhh-cccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheee
Q 009966 426 HLKLNEWLMEPSRM-TLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVW 487 (521)
Q Consensus 426 ~Lgl~~e~~~~S~~-tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~ 487 (521)
.|+++++++.+++. ++++||||+|+|+++.|+++++++++++||+|++++||+|++|+++++
T Consensus 262 ~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 262 KLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred HccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 99999999976664 899999999999999999999999999999999999999999998864
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=3e-35 Score=310.05 Aligned_cols=308 Identities=18% Similarity=0.185 Sum_probs=222.7
Q ss_pred eEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHHH
Q 009966 109 VYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAVI 188 (521)
Q Consensus 109 v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l~ 188 (521)
|+|.+++.|+|+ ++++++++.+..+. +++ ++....|++++++.++++ +..+|+
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~~------~~~~g~G~~~~~~~~~~e-----d~~~la---------- 53 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DPE------KFHIGIGQKKMAVPPIDE-----DIVTMA---------- 53 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CHH------HHHhhcCceEEeeCCCCC-----CHHHHH----------
Confidence 589999999999 99999999987652 554 477789999999888776 667888
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSY 267 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~ 267 (521)
.+|++++|+++ +|+|||.||++| ++++..|+.+..|+++||+++++.++|+.+ +|+|++.||++|.+++++++.++
T Consensus 54 ~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~~-aC~gg~~aL~~A~~~i~s~~~~~ 130 (379)
T TIGR01835 54 ASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELKQ-ACYGATAALQMAKGHVALSPDRK 130 (379)
T ss_pred HHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEecc-ccHHHHHHHHHHHHHHHcCCCCe
Confidence 99999999998 899999999986 567888999999999999987899999995 99999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEE-eEEeccCCCcccceecccCccccc
Q 009966 268 ALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTL-RTHKGADDKSYNCVSQQEDESKRI 346 (521)
Q Consensus 268 aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v-~t~~~~d~~~~~~v~~~~d~~G~~ 346 (521)
||||++|+... ...+.. ..+|||||+|+||++.+. +..+. .+...+++. ++. +.+...
T Consensus 131 aLVv~~D~a~~---~~~~~~----~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~df-~~p~~~---- 189 (379)
T TIGR01835 131 VLVIASDIAKY---GLESPG----EPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MDF-WRPNYS---- 189 (379)
T ss_pred EEEEEeehhhc---ccCCCC----CccccCccEEEEEecCCC--------eeEEeccceeeecCC-CCc-cCCCCC----
Confidence 99999998532 111111 258999999999997542 11110 111222221 221 122110
Q ss_pred ccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHH----HHH
Q 009966 347 GVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAV----LDE 422 (521)
Q Consensus 347 g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~v----i~~ 422 (521)
+.|.+.++ .....|+... .++++..++. .+...+|||+||+||++.++ ++.
T Consensus 190 ------~~~~v~g~-----------------~s~~~y~~~~-~~~~~~~l~~-~g~~~~did~~i~H~p~~~~~~k~~~~ 244 (379)
T TIGR01835 190 ------TTALVDGQ-----------------YSNEQYLNAF-ENAWNDYAKR-TGLSLADFAAFCFHVPFTKMGLKALRH 244 (379)
T ss_pred ------CceeECcH-----------------HHHHHHHHHH-HHHHHHHHHH-hCCCHHHcCEEEECCCCCcHHHHHHHH
Confidence 00111111 0111222211 2233322222 23346799999999997766 344
Q ss_pred HHHHcCCCc-c----cccchhhcccCccccccchHHHHHHHHHHcC-CCCCCCEEEEEEeChHHHhhheeeEEecc
Q 009966 423 VEKHLKLNE-W----LMEPSRMTLYRFGNTSSSCLWYELAYFEAKG-RIRKGDRTWQIAFGSGFKCNSAVWRALRT 492 (521)
Q Consensus 423 v~~~Lgl~~-e----~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g-~lk~GD~VlliafGsG~~~~s~v~r~~~~ 492 (521)
+.+.++++. + .+++|+.+++++|||+|+|+++.|+.+++.+ ++++||+|++++||+|+.......+....
T Consensus 245 ~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~~ 320 (379)
T TIGR01835 245 ILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVAG 320 (379)
T ss_pred HHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEccc
Confidence 566677773 3 3345667899999999999999999999886 79999999999999998776666665433
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=2.3e-33 Score=299.49 Aligned_cols=311 Identities=18% Similarity=0.249 Sum_probs=221.3
Q ss_pred CCCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeC--CCCCCCCCCCchhHHHHHH
Q 009966 105 RPRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGG--PKSLFDNPLDNKNMALAMK 182 (521)
Q Consensus 105 r~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~--~~~~~~~p~~~~~la~~~~ 182 (521)
+|++|+|.++|.|+|+ ++|+++++.++.+. +++| + ++||++|++. ++++ +..+|+
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~~------~--~~GI~~r~~ava~~~E-----d~~tmA---- 57 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SKGK------Y--TIGLGQDCMAFCTDVE-----DVISMS---- 57 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHHH------H--hhccceeEeccCCCCC-----CHHHHH----
Confidence 4789999999999999 99999999988663 5665 3 5899999974 4555 778998
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHH---HHcCCCCCeeEEEecCccchHHHHHHHHHHH
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVV---NHYKLRGNILSYNLGGMGCSAGLISIDLARR 258 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~---~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~ 258 (521)
+.|++++|+++|++|++||+||++| |+++..|+++..|+ ++||.+ ++.+||+++ +|+||+.||++|.+
T Consensus 58 ------~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~~-AC~G~~~AL~~A~~ 129 (459)
T PLN02577 58 ------LTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDSTN-ACYGGTAALLNCVN 129 (459)
T ss_pred ------HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehhh-hhHHHHHHHHHHHH
Confidence 9999999999999999999999997 56788999999886 678876 899999995 99999999999999
Q ss_pred HHhcCC--CCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCC-cccc
Q 009966 259 LLQVTP--DSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDK-SYNC 335 (521)
Q Consensus 259 lL~s~~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~-~~~~ 335 (521)
+++++. .++||||++|+.+... .+ .+ ..+||||+|+||+..+. ..+.. ...+..+. .++
T Consensus 130 ~i~sg~~~~~~aLVV~aD~a~~~~-~~-~e------~t~GdGA~A~lv~~~~~------~~l~~---~~~g~~~~~~~D- 191 (459)
T PLN02577 130 WVESSSWDGRYGLVVAADSAVYAE-GP-AR------PTGGAGAVAMLVGPNAP------IVFES---KYRGSHMAHVYD- 191 (459)
T ss_pred HHHcCCCCCCeEEEEEechhhccC-CC-CC------CCCCcceEEEEEccCCC------ceeec---ccccccCcccch-
Confidence 999986 5999999999976421 12 22 35699999999986442 11111 11111111 122
Q ss_pred eecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhcccc-----ccCcccccCEE
Q 009966 336 VSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPY-----IPDFKLAFEHF 410 (521)
Q Consensus 336 v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~-----~~~~~~did~f 410 (521)
.+.+.... +.|.+.| + +.+.+|+... .++++...+.. .+...+|||+|
T Consensus 192 f~rP~~~~---------~~~~vdG-----------~------~s~~~yl~~~-~~~~~~~~~k~~~~~~~g~~~~d~d~~ 244 (459)
T PLN02577 192 FYKPDLAS---------EYPVVDG-----------K------LSQTCYLMAL-DSCYKRFCEKYEKLEGKQFSISDADYF 244 (459)
T ss_pred hcccCCCC---------CceEEcc-----------h------HHHHHHHHHH-HHHHHHHHHHhhcccccCCCHHHcCEE
Confidence 22222110 0111111 1 1122333221 11222111110 02346899999
Q ss_pred EecccCHHHHHHHHHHcCCC----------------------------------------------cccccchhhcccCc
Q 009966 411 CIHAGGRAVLDEVEKHLKLN----------------------------------------------EWLMEPSRMTLYRF 444 (521)
Q Consensus 411 ~~H~~~~~vi~~v~~~Lgl~----------------------------------------------~e~~~~S~~tl~r~ 444 (521)
|+||+..++...-.+.|.+. .++++||...-++.
T Consensus 245 vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~v 324 (459)
T PLN02577 245 VFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQV 324 (459)
T ss_pred EecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhc
Confidence 99999777776655444311 16777787888899
Q ss_pred cccccchHHHHHHHHHHcCC-CCCCCEEEEEEeChHHHhhheeeEEec
Q 009966 445 GNTSSSCLWYELAYFEAKGR-IRKGDRTWQIAFGSGFKCNSAVWRALR 491 (521)
Q Consensus 445 GNtsSaSi~~~La~~~~~g~-lk~GD~VlliafGsG~~~~s~v~r~~~ 491 (521)
||+.++|++..|.-+++... ..+|+||.+.++|||........+...
T Consensus 325 GN~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 325 GNMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred CcccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeC
Confidence 99999999999999987543 459999999999999877766666554
No 34
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.98 E-value=3.7e-31 Score=271.46 Aligned_cols=313 Identities=21% Similarity=0.228 Sum_probs=237.2
Q ss_pred ceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHH
Q 009966 108 TVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAV 187 (521)
Q Consensus 108 ~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l 187 (521)
.++|++++.|.|. ++|+.+++.+..+- +++ |+....|++++.+.+.+| +..+|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~E-----D~vTma--------- 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWDE-----DAVTMA--------- 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----ChH------HhhhccccccccCCCCch-----hHHHHH---------
Confidence 5899999999999 99999999876542 444 577889999999998887 788998
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
++|++++|++.++||++|++|+++| |..+..-+.+..|++.||+.+++.++|+.+ +|-+++.||+.|.+++.+++.+
T Consensus 56 -veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~ 133 (377)
T COG3425 56 -VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMIS 133 (377)
T ss_pred -HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999997 557788899999999999999999999996 9999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCccccc
Q 009966 267 YALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDESKRI 346 (521)
Q Consensus 267 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~~ 346 (521)
++|||++|+.- |...+.- -..+|+||+|+|++..+... .++.. +...+++ .++ .+++++.
T Consensus 134 ~~LvI~sD~a~---~~~~~~~----E~t~GAGavA~lIg~n~~~~----a~~~~---~~syt~d-~~D-FwRp~~~---- 193 (377)
T COG3425 134 YGLVIGADTAQ---YAPGDAL----EYTAGAGAVAFLIGKNPPIV----AEFEG---TGSYTTD-TPD-FWRPDGQ---- 193 (377)
T ss_pred ceEEEeehhhc---cCCCccc----CccCCCceEEEEEccCCCeE----EEecC---ceEEecC-CCc-ccccCCC----
Confidence 99999999853 2223322 25789999999999864321 11111 1112222 122 2333221
Q ss_pred ccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHHHH
Q 009966 347 GVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKH 426 (521)
Q Consensus 347 g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~~~ 426 (521)
..|.+.|+ +| ...|++.+ .+.++...++ .+...+|||++|+|+++.++-....+.
T Consensus 194 ------~yp~~dg~---------------~s--~~~Y~~~~-~~a~~~~~~k-~gls~~dfdy~vfH~P~~k~~~ka~k~ 248 (377)
T COG3425 194 ------PYPYVDGR---------------FS--EPAYFKHV-ENAAKGYMEK-TGLSPDDFDYIVFHQPNGKFPKKAAKS 248 (377)
T ss_pred ------cccccCce---------------ec--HHHHHHHH-HHHHHHHHHH-hCCChhhhCeEEecCCCCchHHHHHHH
Confidence 01111111 01 01122211 1111111111 122358999999999999999999999
Q ss_pred cCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhheeeEEeccCC
Q 009966 427 LKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTIN 494 (521)
Q Consensus 427 Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s~v~r~~~~~~ 494 (521)
++.+.+++.|+....++.||+.|+|+++.|+.+++..+ .+||||++.+||||......-.+....+.
T Consensus 249 l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 249 LGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred hCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 99999999999999999999999999999999998766 79999999999999766555555555554
No 35
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.97 E-value=1.3e-31 Score=260.60 Aligned_cols=204 Identities=23% Similarity=0.330 Sum_probs=164.6
Q ss_pred HcCCCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCH--HHHHHHHHHHHHhCCccEEeCCCCCC----------CC
Q 009966 103 MSRPRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTE--ESLAFQKKVVERSGIGKMSGGPKSLF----------DN 170 (521)
Q Consensus 103 ~~r~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~--~~~~f~~ki~~~sGi~~r~~~~~~~~----------~~ 170 (521)
.+.+.+.+|+++|+..|+ ++++++++.+.+.+....++ +..++++++++++||++|+..-+.+. ..
T Consensus 9 ~~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 456789999999999999 99999999987533222222 44678899999999999997743110 11
Q ss_pred CCCchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHH
Q 009966 171 PLDNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGL 250 (521)
Q Consensus 171 p~~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l 250 (521)
|.....|+.+.+++.+|+.+|++++|+++|++++|||+||++|+++...|++..+|+++|||++++..+.|.+|||+||+
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 11224677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEeccCCCCCCCC--CCccccccccccccceeeEEEeccC
Q 009966 251 ISIDLARRLLQVTPDSYALVVSTENITMNWYGG--NDRSMLLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 251 ~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~--~dr~~lv~~~lFgDGAaAvLLs~~~ 308 (521)
.||.+|+++.+++|..+||||+.|.+|.+|..+ .+++.+++++||||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 999999999999999999999999999877643 3467889999999999999999764
No 36
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.97 E-value=5e-30 Score=273.54 Aligned_cols=317 Identities=16% Similarity=0.186 Sum_probs=215.0
Q ss_pred ceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEE--eCCCCCCCCCCCchhHHHHHHHhH
Q 009966 108 TVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMS--GGPKSLFDNPLDNKNMALAMKETK 185 (521)
Q Consensus 108 ~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~--~~~~~~~~~p~~~~~la~~~~ea~ 185 (521)
+|+|.+++.|+|+ ++|+++++.++.+. ++++ + .+||++|+ +.++++ +..+|+
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~k------~--~~GI~~rr~av~~~~E-----d~~tma------- 54 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAGK------Y--TIGLGQTKMGFCTDRE-----DINSLC------- 54 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHHH------h--eechhheecccCCCCC-----CHHHHH-------
Confidence 5899999999999 99999999887653 4443 3 58999999 456666 778888
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHc---CCCCCeeEEEecCccchHHHHHHHHHHHHHh
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHY---KLRGNILSYNLGGMGCSAGLISIDLARRLLQ 261 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~L---Gl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~ 261 (521)
..|++++|++++++|++||+||++| |+++..|+.+..|++.| |.+ ++.+||+.+ +|+|++.||.+|.++++
T Consensus 55 ---~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~~-AC~G~t~AL~~A~~~i~ 129 (454)
T TIGR01833 55 ---LTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTTN-ACYGGTAALFNAINWIE 129 (454)
T ss_pred ---HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEeccc-cchhHHHHHHHHHHHHH
Confidence 9999999999999999999999997 67899999999999955 455 899999995 99999999999999999
Q ss_pred cCC--CCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecc
Q 009966 262 VTP--DSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQ 339 (521)
Q Consensus 262 s~~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~ 339 (521)
++. .++||||++|+.- |. +.+. ..++||||+||||+..+.- .++. ++..+++.....+|+-....
T Consensus 130 s~~~~~~~aLVV~sDia~---y~--~~~~---~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF~rP~~~~ 196 (454)
T TIGR01833 130 SSSWDGRYALVVAGDIAV---YA--KGNA---RPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDFYKPDLAS 196 (454)
T ss_pred cCCcCCCeEEEEEecccc---cc--CCCe---eeccccceEEEEeccCccc----eecC-ccceEEEeecccccCCCCCC
Confidence 885 6999999999932 22 2221 2478999999999976541 0111 01112222222233211100
Q ss_pred cCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhcccc---ccCcccccCEEEecccC
Q 009966 340 EDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPY---IPDFKLAFEHFCIHAGG 416 (521)
Q Consensus 340 ~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~---~~~~~~did~f~~H~~~ 416 (521)
+...+.-.+|-+ .--+++. +-+..| ++....+++.. .....+|||++|+|++.
T Consensus 197 --~~p~vdg~~S~~---~Yl~a~~--------------~~y~~y-----~~~~~~a~~~~~~~~~~~~~dfd~~~fH~P~ 252 (454)
T TIGR01833 197 --EYPVVDGKLSIQ---CYLSALD--------------RCYKSY-----CKKIEKQWGKSGGDRKFTLNDFDYMVFHSPY 252 (454)
T ss_pred --cccccCCccCHH---HHHHHHH--------------HHHHHH-----HHHHHHhhhhhccccCCCHhHcCEEeccCCc
Confidence 000000111211 0000110 001111 11111112111 01235799999999997
Q ss_pred HHHHHHH-HHHc---------------------------------------------CCCcccccchhhcccCccccccc
Q 009966 417 RAVLDEV-EKHL---------------------------------------------KLNEWLMEPSRMTLYRFGNTSSS 450 (521)
Q Consensus 417 ~~vi~~v-~~~L---------------------------------------------gl~~e~~~~S~~tl~r~GNtsSa 450 (521)
.++.... .+.+ +...++++||...-++.||+.++
T Consensus 253 ~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~Yta 332 (454)
T TIGR01833 253 CKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTA 332 (454)
T ss_pred ccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhh
Confidence 6665543 3222 11226788877777899999999
Q ss_pred hHHHHHHHHHHcCC--CCCCCEEEEEEeChHHHhhheeeEEecc
Q 009966 451 CLWYELAYFEAKGR--IRKGDRTWQIAFGSGFKCNSAVWRALRT 492 (521)
Q Consensus 451 Si~~~La~~~~~g~--lk~GD~VlliafGsG~~~~s~v~r~~~~ 492 (521)
|++..|.-+++..+ ...|+||.+.+||||........+....
T Consensus 333 Slyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 333 SLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 99999999997543 4579999999999997777666666544
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=1.3e-27 Score=236.69 Aligned_cols=238 Identities=19% Similarity=0.168 Sum_probs=180.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhc
Q 009966 184 TKAVIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 184 a~~l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +..++++. .||++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 3456699999999999999999999999965 5667899999999999998 79999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCcccceecccCc
Q 009966 263 TPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVSQQEDE 342 (521)
Q Consensus 263 ~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~ 342 (521)
+..+++||+++|. ++|||||+|+||++.+....+....+..+.......++..+.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-------- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-------- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC--------
Confidence 9999999999998 589999999999986532111100011122222222221100
Q ss_pred ccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHH
Q 009966 343 SKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE 422 (521)
Q Consensus 343 ~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~ 422 (521)
..... +.+ ....++.++.. ...++|+|+|++|+.+..+.+.
T Consensus 140 -----~~~~~-------~~~----------------------~~~i~~~l~~a-----g~~~~did~~~~h~~~~~~~~~ 180 (254)
T cd00327 140 -----PAVSG-------EGL----------------------ARAARKALEGA-----GLTPSDIDYVEAHGTGTPIGDA 180 (254)
T ss_pred -----CCCCh-------HHH----------------------HHHHHHHHHHc-----CCCHHHCCEEEccCCcCccccH
Confidence 00000 000 00112333321 1224799999999999999999
Q ss_pred HHHHcCCCccccc--chhhcccCccccccchHHHHHHHHHHcCCCC-------CCCEEEEEEeChHHHhhheee
Q 009966 423 VEKHLKLNEWLME--PSRMTLYRFGNTSSSCLWYELAYFEAKGRIR-------KGDRTWQIAFGSGFKCNSAVW 487 (521)
Q Consensus 423 v~~~Lgl~~e~~~--~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk-------~GD~VlliafGsG~~~~s~v~ 487 (521)
+++.++++.++.. +...+..+|||++++|.++.|..+.+..+.+ +||++++++||.|++++++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 181 VELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred HHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 9999999887764 3467889999999999999999998876666 899999999999999998875
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.92 E-value=5.8e-25 Score=226.35 Aligned_cols=251 Identities=16% Similarity=0.124 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHHHHcCCC----CCCcCEEEEeccC-CCC---------------------CCcHHHHHHHHcCCCCCeeE
Q 009966 185 KAVIVGAIDELLAKTGVK----PRDIGILLVNSSL-FNP---------------------TPSLSAMVVNHYKLRGNILS 238 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~----p~dID~LI~~ss~-~~~---------------------~Ps~a~~I~~~LGl~~~~~~ 238 (521)
..++..|++++|+++|++ +++||.||++++. .+. .|+.+.+|+..+|++ ..+
T Consensus 12 ~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~~ 89 (332)
T cd00825 12 SILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GPA 89 (332)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CCc
Confidence 445599999999999999 9999999998653 333 788999999999994 788
Q ss_pred EEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCCC----------CC--Cc--cccccccccccceeeEEE
Q 009966 239 YNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYG----------GN--DR--SMLLTNCLFRLGGAAILL 304 (521)
Q Consensus 239 ~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~----------~~--dr--~~lv~~~lFgDGAaAvLL 304 (521)
++++ .||++++.||++|..+|++++.+++||+++|..+..+.. +. .+ +.....++|||||+|+||
T Consensus 90 ~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~vL 168 (332)
T cd00825 90 YDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVV 168 (332)
T ss_pred cccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEEE
Confidence 9999 599999999999999999999999999999987653221 00 00 111235799999999999
Q ss_pred eccCCCcc---ccccceeeEEeEEeccCCCcccceecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHH
Q 009966 305 SNRSSDRR---RAKYELLHTLRTHKGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLL 381 (521)
Q Consensus 305 s~~~~~~~---~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~ 381 (521)
++.+.... +...++.+ .....++..... . ... .+.
T Consensus 169 ~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~~-~-------------~~~-----~~~-------------------- 206 (332)
T cd00825 169 EELEHALARGAHIYAEIVG---TAATIDGAGMGA-F-------------APS-----AEG-------------------- 206 (332)
T ss_pred CcHHHHHHCCCeEEEEEEE---EEEccCCCCCCC-C-------------CcC-----HHH--------------------
Confidence 97553111 01122222 222223221100 0 000 000
Q ss_pred HHHHHHHHHHHHhhccccccCcccccCEEEecccCHHHHHHHHHHcCCCcccc--cchhhcccCccccccchHHHHHHHH
Q 009966 382 FSLTLVARKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEVEKHLKLNEWLM--EPSRMTLYRFGNTSSSCLWYELAYF 459 (521)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~--~~S~~tl~r~GNtsSaSi~~~La~~ 459 (521)
... ..+++++. .....+|||++++|+.|..+.+.+++.++++.++. .+...+..+|||++++|.++.|..+
T Consensus 207 -~~~-~i~~al~~-----agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~ 279 (332)
T cd00825 207 -LAR-AAKEALAV-----AGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEA 279 (332)
T ss_pred -HHH-HHHHHHHH-----cCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHH
Confidence 000 11233332 12235799999999999999999999888876542 1236788999999999999999999
Q ss_pred HHcCCCC-------------------------CCCEEEEEEeChHHHhhheee
Q 009966 460 EAKGRIR-------------------------KGDRTWQIAFGSGFKCNSAVW 487 (521)
Q Consensus 460 ~~~g~lk-------------------------~GD~VlliafGsG~~~~s~v~ 487 (521)
....+.+ +|+++++++||.|.+++++|+
T Consensus 280 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 280 VLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 8866666 899999999999999998874
No 39
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.80 E-value=3.4e-19 Score=166.13 Aligned_cols=168 Identities=24% Similarity=0.305 Sum_probs=127.9
Q ss_pred CCCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHh
Q 009966 105 RPRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKET 184 (521)
Q Consensus 105 r~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea 184 (521)
||++|+|.+++.|.|+ .+++.+++.++-+. +++ |+....|.++..+.++.| +..+|+
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~E-----D~vTmA------ 57 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPDE-----DIVTMA------ 57 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TTS------HHHHH------
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCcc-----cHHHHH------
Confidence 7999999999999999 99999999876543 333 454445656677888777 788998
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHcCC--CCCeeEEEecCccchHHHHHHHHHHHHHh
Q 009966 185 KAVIVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKL--RGNILSYNLGGMGCSAGLISIDLARRLLQ 261 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl--~~~~~~~dl~gmgCsg~l~AL~lA~~lL~ 261 (521)
..|++++|++.+++|++|+.|+|+| |......|.+.+|++.||+ ..++..+|+.+ +|.|+..||+.|.++++
T Consensus 58 ----~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~-ACygGTaAL~~a~~~v~ 132 (174)
T PF01154_consen 58 ----ANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQ-ACYGGTAALQNAVNWVA 132 (174)
T ss_dssp ----HHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEES-GGGHHHHHHHHHHHHHC
T ss_pred ----HHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhh-hhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998 4456678899999999999 45789999995 99999999999999999
Q ss_pred cCC--CCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccC
Q 009966 262 VTP--DSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 262 s~~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~ 308 (521)
+++ .+++|||++|+.- |...+- ...-|-||+|+|++...
T Consensus 133 s~~~~g~~aLVVasDiA~---y~~g~~-----e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 133 SSPWDGRKALVVASDIAR---YDLGSA-----EPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp STTSTTEEEEEEEEEEE-----STTTT-----GGG-EEEEEEEEEECS-
T ss_pred cCCCCCCeEEEEeccccc---cCCCCc-----cccccceeEEEEecCCC
Confidence 974 6899999999952 332221 25679999999999753
No 40
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.79 E-value=4.8e-19 Score=163.35 Aligned_cols=117 Identities=23% Similarity=0.429 Sum_probs=90.0
Q ss_pred cccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHh-hccccccCcccccCEEEecccCHHHHHHHH
Q 009966 346 IGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKM-KIKPYIPDFKLAFEHFCIHAGGRAVLDEVE 424 (521)
Q Consensus 346 ~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~-~~~~~~~~~~~did~f~~H~~~~~vi~~v~ 424 (521)
+.+.|++++|.+.++.++..+ .++++. .++ ..++.+|++|+||++|++.++
T Consensus 26 f~~~Ls~~vP~~i~~~i~~~~----------------------~~~L~~~g~~------~~~~~~wavHPGG~~ILd~v~ 77 (151)
T PF02797_consen 26 FHFILSKEVPDLISDNIPPFV----------------------EDLLARHGLS------DWDILFWAVHPGGRKILDAVE 77 (151)
T ss_dssp EEEEE-TTHHHHHHHHHHHHH----------------------HHHHHGGTCC------SGGGSEEEEE-SSHHHHHHHH
T ss_pred EEEEEhhHhHHHHHHHHHHHH----------------------HHHHhhhccc------ccccceeeecCChHHHHHHHH
Confidence 778999999998776543322 122221 121 235679999999999999999
Q ss_pred HHcCCCcccccchhhcccCccccccchHHHHHHHHHH----cCCCCC---CCEEEEEEeChHHHhhheeeEEe
Q 009966 425 KHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEA----KGRIRK---GDRTWQIAFGSGFKCNSAVWRAL 490 (521)
Q Consensus 425 ~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~----~g~lk~---GD~VlliafGsG~~~~s~v~r~~ 490 (521)
+.|+|+++++.+|+.+|++|||+||+++++.|+++.+ +|.... +++++++|||+||+..++++|.+
T Consensus 78 ~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 78 EALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred HHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 9999999999999999999999999999999999887 344332 48999999999999999999975
No 41
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.78 E-value=2.2e-19 Score=151.35 Aligned_cols=83 Identities=33% Similarity=0.497 Sum_probs=75.0
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCN 483 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~ 483 (521)
.+|||+|++||.+.++++.+.+.+|++++++ ..++++||||+|+|+|++|+++.++|++++||+|+++++|+|++|+
T Consensus 8 ~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~~ 84 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSWG 84 (90)
T ss_dssp GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEEE
T ss_pred HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhheeE
Confidence 4799999999999999999999999999998 6799999999999999999999999999999999999999999999
Q ss_pred heeeEE
Q 009966 484 SAVWRA 489 (521)
Q Consensus 484 s~v~r~ 489 (521)
+++|||
T Consensus 85 ~~~~~~ 90 (90)
T PF08541_consen 85 AAVLRW 90 (90)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999997
No 42
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.68 E-value=6e-16 Score=161.73 Aligned_cols=254 Identities=15% Similarity=0.071 Sum_probs=164.6
Q ss_pred hHHHHHHHHHHHHHHcC-CCCCCcCEEEEecc------CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHH
Q 009966 184 TKAVIVGAIDELLAKTG-VKPRDIGILLVNSS------LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLA 256 (521)
Q Consensus 184 a~~l~~~Aa~~aL~~ag-i~p~dID~LI~~ss------~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA 256 (521)
...|+..|++++|++++ +++++||++|+.++ ++...|.++..++.++|+.....++++++ ||++++.||..|
T Consensus 65 ~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~-~casg~~Al~~A 143 (348)
T PRK06147 65 LAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIAR-GRVSGAVALAQA 143 (348)
T ss_pred HHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccc-cchHHHHHHHHH
Confidence 44667999999999999 89999999998643 23334567889999999965577899995 999999999999
Q ss_pred HHHHhcCCCCeEEEEEeccCCCC----CC------CCC-CccccccccccccceeeEEEeccCCCccccccceeeEEeEE
Q 009966 257 RRLLQVTPDSYALVVSTENITMN----WY------GGN-DRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTH 325 (521)
Q Consensus 257 ~~lL~s~~~~~aLVVs~E~~s~~----~~------~~~-dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~ 325 (521)
.++|+.+..+.+||+++|.++.. ++ ... +++ ..+|||||+++||++.+....+ .-++.. ..
T Consensus 144 ~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~----G~v~GEGA~a~vLe~~~~A~~r-ga~i~a---~g 215 (348)
T PRK06147 144 RRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSN----GFIPGEAAAAVLLGRPAGGEAP-GLPLLG---LG 215 (348)
T ss_pred HHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCCC----ceeeeceEEEEEEccHhhhhcC-CCceEE---EE
Confidence 99999999999999999987641 11 112 233 4689999999999986532111 112222 11
Q ss_pred eccCCCcccceecccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHHHHHHHHhhccccccCccc
Q 009966 326 KGADDKSYNCVSQQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLVARKIFKMKIKPYIPDFKL 405 (521)
Q Consensus 326 ~~~d~~~~~~v~~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~~~~v~~~~~~~~~~~~~~ 405 (521)
.+.+...+. . +.+.|. .++.+. ...++.++. .....+
T Consensus 216 ~~~~~~~~~---~------------~~~~p~-~g~gl~----------------------~ai~~AL~~-----agl~~~ 252 (348)
T PRK06147 216 LGREPAPVG---E------------SEDLPL-RGDGLT----------------------QAIRAALAE-----AGCGLE 252 (348)
T ss_pred EeecCCCcc---c------------CCCCCC-ChHHHH----------------------HHHHHHHHH-----cCCCHH
Confidence 122211110 0 000000 000000 001222322 112247
Q ss_pred ccCEEEecccCHHHHHHH-----HHHcCCCcccccchhhcccCccccccchHHHHHHHHHH--cCCCCCCCEEEEEEeCh
Q 009966 406 AFEHFCIHAGGRAVLDEV-----EKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEA--KGRIRKGDRTWQIAFGS 478 (521)
Q Consensus 406 did~f~~H~~~~~vi~~v-----~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~--~g~lk~GD~VlliafGs 478 (521)
|||+++.|..|....+.. .+.++-..+.. +-..+-..+||+++++-.+++..... +...-+|+++++++-.-
T Consensus 253 dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~-~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 253 DMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFF-DLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HCCEEEcCCCCCccchHHHHHHHHHHhhhccCCC-ceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCC
Confidence 999999999876664433 33454322222 11345666999999999999886443 24456799999999887
Q ss_pred HHHhhheeeEEe
Q 009966 479 GFKCNSAVWRAL 490 (521)
Q Consensus 479 G~~~~s~v~r~~ 490 (521)
.-..++++++..
T Consensus 332 ~g~r~a~~l~~~ 343 (348)
T PRK06147 332 DGARAALVLEYR 343 (348)
T ss_pred CCceEEEEEecc
Confidence 777888888854
No 43
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.66 E-value=3.3e-15 Score=151.62 Aligned_cols=316 Identities=18% Similarity=0.264 Sum_probs=212.6
Q ss_pred CCCceEEEEEeEEeCCCCceeehHHHHHHHhhcCCCCHHHHHHHHHHHHHhCCccEEeC--CCCCCCCCCCchhHHHHHH
Q 009966 105 RPRTVYLVNFACYKPDPSEMCSAERLFRMAAKNGYFTEESLAFQKKVVERSGIGKMSGG--PKSLFDNPLDNKNMALAMK 182 (521)
Q Consensus 105 r~~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~ki~~~sGi~~r~~~--~~~~~~~p~~~~~la~~~~ 182 (521)
+|.+|+|.++-+|.|. ..|+++++..+-+. +.. | -..|+++.... .+.+ +..+|.
T Consensus 8 ~p~dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g------K--ytIGLGq~~MgfcsdrE-----Di~Sl~---- 64 (462)
T KOG1393|consen 8 WPKDVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG------K--YTIGLGQTQMGFCSDRE-----DIISLS---- 64 (462)
T ss_pred CccccceeEEEEEcCc--cccChhhHhhcCCc----ccc------c--eEeccCcceecccCchh-----hhhhhh----
Confidence 5779999999999999 88999998865432 111 1 23566666543 2222 445566
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccC-CCCCCcHHHHHHHHcC--CCCCeeEEEecCccchHHHHHHHHHHHH
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGILLVNSSL-FNPTPSLSAMVVNHYK--LRGNILSYNLGGMGCSAGLISIDLARRL 259 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LG--l~~~~~~~dl~gmgCsg~l~AL~lA~~l 259 (521)
..++++++++-.|+++.|+.|-|+|.+ -.-..|.-..+.+.++ =..|+...|..+ +|.||..||--|-+|
T Consensus 65 ------ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnW 137 (462)
T KOG1393|consen 65 ------LTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNW 137 (462)
T ss_pred ------HHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhh
Confidence 999999999999999999999999854 4557788888888887 455899999996 999999999999999
Q ss_pred HhcCC--CCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccceeeEEeEEeccCCCccccee
Q 009966 260 LQVTP--DSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYELLHTLRTHKGADDKSYNCVS 337 (521)
Q Consensus 260 L~s~~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~ 337 (521)
+++.. +++||||++|+.- +-.++-| +.-|-||.|+|+++...-. |+- ++..+|+.. .|+. |
T Consensus 138 iESssWDGr~aivV~gDIAv--Y~~G~aR------pTGGAgAVAmLIgPnApi~----fer-glr~thM~h---ayDF-y 200 (462)
T KOG1393|consen 138 IESSSWDGRYAIVVCGDIAV--YAKGNAR------PTGGAGAVAMLIGPNAPII----FER-GLRATHMQH---AYDF-Y 200 (462)
T ss_pred hhhcccCCceeEEEEeeEEE--ecCCCCC------CCCCcceEEEEEcCCCceE----ecc-cchhhhhhh---hhhc-c
Confidence 99874 7999999999852 2234445 3569999999999865421 110 111233321 2332 2
Q ss_pred cccCcccccccccchhHHHHHHHhhhhhhhccCCCcccchhHHHHHHHHH-------HHHHHHhhccccccCcccccCEE
Q 009966 338 QQEDESKRIGVKISKDLMAIAGEALKTNITTLGPLVLPMSEQLLFSLTLV-------ARKIFKMKIKPYIPDFKLAFEHF 410 (521)
Q Consensus 338 ~~~d~~G~~g~~ls~dl~~v~g~alk~ni~~lgp~vlp~se~~~~~~~~~-------~~~v~~~~~~~~~~~~~~did~f 410 (521)
.| .+..+-|-|.|. ..+..|++.+ .+++-+...+. -++-.++||.+
T Consensus 201 KP---------dl~SEyPvVDGk-----------------lSi~cYl~Ald~cY~~~~kK~~~~~~~~-~~~~l~~fdy~ 253 (462)
T KOG1393|consen 201 KP---------DLLSEYPVVDGK-----------------LSIQCYLSALDRCYTVYRKKIAAQWQKS-GSDNLNSFDYI 253 (462)
T ss_pred CC---------CCCCcCceecCe-----------------ehHHHHHHHHHHHHHHHHHHHHHHhccc-cCcccccCCeE
Confidence 22 122233433332 1111222211 12222211111 12224689999
Q ss_pred EecccCHHHHHH-HH-----------------------------------------HHcCCCcccccchhhcccCccccc
Q 009966 411 CIHAGGRAVLDE-VE-----------------------------------------KHLKLNEWLMEPSRMTLYRFGNTS 448 (521)
Q Consensus 411 ~~H~~~~~vi~~-v~-----------------------------------------~~Lgl~~e~~~~S~~tl~r~GNts 448 (521)
++|.+--++... ++ -...+-.+++.+|...-.+.||+.
T Consensus 254 ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmY 333 (462)
T KOG1393|consen 254 IFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMY 333 (462)
T ss_pred EEeCchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccc
Confidence 999987655544 11 122233456777666677899999
Q ss_pred cchHHHHHHHHHHcC--CCCCCCEEEEEEeChHHHhhheeeEEeccCC
Q 009966 449 SSCLWYELAYFEAKG--RIRKGDRTWQIAFGSGFKCNSAVWRALRTIN 494 (521)
Q Consensus 449 SaSi~~~La~~~~~g--~lk~GD~VlliafGsG~~~~s~v~r~~~~~~ 494 (521)
++|++..|+.++... .--.|.||.+.++|||....-.-+|...+..
T Consensus 334 TaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~ 381 (462)
T KOG1393|consen 334 TASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDAT 381 (462)
T ss_pred cHHHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCC
Confidence 999999999988865 3346999999999999988877788776544
No 44
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.62 E-value=2.4e-14 Score=145.55 Aligned_cols=114 Identities=17% Similarity=0.228 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
+|+.+|+++||+++|++++|||.+|+++.++ .+..+..++++||++ .|++++ +|++++.||.+|..++++|..
T Consensus 52 eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGIP----~fdV~~-ACSTf~~AL~lAa~lI~SG~a 124 (327)
T TIGR02845 52 KLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGIP----FLGLYG-ACSTSMETLALGAMLVDGGFA 124 (327)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCCC----EEEEec-cCHHHHHHHHHHHHHHhCCCC
Confidence 3449999999999999999999999987544 345688999999974 599996 999999999999999999999
Q ss_pred CeEEEEEeccCCC---CCC---CC--CCccccccccccccceeeEEEeccCC
Q 009966 266 SYALVVSTENITM---NWY---GG--NDRSMLLTNCLFRLGGAAILLSNRSS 309 (521)
Q Consensus 266 ~~aLVVs~E~~s~---~~~---~~--~dr~~lv~~~lFgDGAaAvLLs~~~~ 309 (521)
++||||++|..|. .+. ++ .++.+ ..+|+|||+|+||++.+.
T Consensus 125 d~VLVV~Ssh~S~AErqfr~p~eyg~q~~~t---a~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 125 DRVLAATSSHYATAERQFRYPTEYGVQKPPT---AQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CEEEEEEecccchhhhhcccccccccCCCCe---eeEEEcccEEEEEeecCC
Confidence 9999999888872 111 22 44543 579999999999998754
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.52 E-value=6.9e-13 Score=135.28 Aligned_cols=114 Identities=23% Similarity=0.252 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
|+.+|++++|+++|++++|||.+|+++.... +..+..+++.||+ +++++.+ +|+++..||.+|..+++++..+
T Consensus 59 La~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG~ad 131 (337)
T PRK08304 59 MMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGGFAD 131 (337)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcCCCC
Confidence 3399999999999999999999999875433 4678899999986 5899996 9999999999999999999999
Q ss_pred eEEEEEeccCCC---CCCCC----CCccccccccccccceeeEEEeccCC
Q 009966 267 YALVVSTENITM---NWYGG----NDRSMLLTNCLFRLGGAAILLSNRSS 309 (521)
Q Consensus 267 ~aLVVs~E~~s~---~~~~~----~dr~~lv~~~lFgDGAaAvLLs~~~~ 309 (521)
+||||++|..+. .|..+ ..|.. +...+++||+|+||++...
T Consensus 132 ~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 132 RVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred EEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCC
Confidence 999999999875 24332 23332 3578999999999998654
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.47 E-value=4.4e-12 Score=134.60 Aligned_cols=120 Identities=18% Similarity=0.274 Sum_probs=91.9
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCE----EEEeccC-C--------------------------CCCCcHHHHHHHHcC
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGI----LLVNSSL-F--------------------------NPTPSLSAMVVNHYK 231 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~----LI~~ss~-~--------------------------~~~Ps~a~~I~~~LG 231 (521)
....++..|++++|+++|+++++||. ++++++. . ...+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 56678899999999999999876654 4444332 1 123567889999999
Q ss_pred CCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----------------------CCCC-CCccc
Q 009966 232 LRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN----------------------WYGG-NDRSM 288 (521)
Q Consensus 232 l~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~----------------------~~~~-~dr~~ 288 (521)
++ ..++.++. +|++++.||..|..+|++|..++|||+++|..+.. ..+. .+++
T Consensus 150 l~--g~~~~v~~-acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~- 225 (406)
T cd00834 150 LR--GPNYTVST-ACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRD- 225 (406)
T ss_pred CC--Ccccccch-HHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCC-
Confidence 96 57789995 99999999999999999999999999999987610 0011 1222
Q ss_pred cccccccccceeeEEEeccCC
Q 009966 289 LLTNCLFRLGGAAILLSNRSS 309 (521)
Q Consensus 289 lv~~~lFgDGAaAvLLs~~~~ 309 (521)
..++||||+|+||++.+.
T Consensus 226 ---g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 226 ---GFVLGEGAGVLVLESLEH 243 (406)
T ss_pred ---CEeeeccEEEEEEecHHH
Confidence 368999999999997543
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.45 E-value=3.1e-12 Score=135.67 Aligned_cols=89 Identities=13% Similarity=0.233 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
+.+|++++|+++|++++|||.||++++ ++...|..+..++..+|++.++.+++++ ++|++++.+|.+|..++++|..+
T Consensus 26 a~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~sG~~~ 104 (386)
T cd00751 26 GAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAAGEAD 104 (386)
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHCCCCC
Confidence 399999999999999999999998864 4555788888899999998558899999 59999999999999999999999
Q ss_pred eEEEEEeccCC
Q 009966 267 YALVVSTENIT 277 (521)
Q Consensus 267 ~aLVVs~E~~s 277 (521)
+|||+++|.+|
T Consensus 105 ~vLv~g~e~~s 115 (386)
T cd00751 105 VVVAGGVESMS 115 (386)
T ss_pred eEEEeeeeccc
Confidence 99999999865
No 48
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.39 E-value=6.5e-13 Score=109.66 Aligned_cols=80 Identities=25% Similarity=0.440 Sum_probs=61.1
Q ss_pred EEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCCCccccccce
Q 009966 239 YNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSSDRRRAKYEL 318 (521)
Q Consensus 239 ~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~~~~~~~~~L 318 (521)
|||++ +|+|++.||++|.++++++..++||||++|+.+. +.++.++.. ..+|||||+|+||++.++. .+++
T Consensus 1 fDi~~-~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~~---~~~~gDgAaA~vl~~~~~~----~~~i 71 (80)
T PF08545_consen 1 FDINQ-ACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQT---AFIFGDGAAAVVLSRDEEG----GFGI 71 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHHH---HTTB-EEEEEEEEEEESSS----SCEE
T ss_pred Ccccc-cchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccCc---ceeecchheEEEEEecCCC----CCeE
Confidence 79995 9999999999999999999999999999999987 555555543 3689999999999997432 3444
Q ss_pred eeEEeEEeccCC
Q 009966 319 LHTLRTHKGADD 330 (521)
Q Consensus 319 ~~~v~t~~~~d~ 330 (521)
+.+++.+||
T Consensus 72 ---l~~~~~tdG 80 (80)
T PF08545_consen 72 ---LDSHLRTDG 80 (80)
T ss_dssp ---EEEEEEE-G
T ss_pred ---EEEEEEcCC
Confidence 445666553
No 49
>PRK09051 beta-ketothiolase; Provisional
Probab=99.36 E-value=5.7e-11 Score=126.31 Aligned_cols=89 Identities=20% Similarity=0.309 Sum_probs=77.5
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCC-cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSS-LFNPTP-SLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~P-s~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
.+|++++|+++|++|+|||.+|++++ ++...+ ..+..+...+|++.++.+++++. +|++|+.|+.+|.+++++|..+
T Consensus 32 ~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~~-aCaSg~~Al~~A~~~I~sG~~d 110 (394)
T PRK09051 32 ATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVNR-LCGSGLQAIVSAAQAILLGDAD 110 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEecc-cchHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999865 445443 45555667779976799999995 9999999999999999999999
Q ss_pred eEEEEEeccCCC
Q 009966 267 YALVVSTENITM 278 (521)
Q Consensus 267 ~aLVVs~E~~s~ 278 (521)
++||+++|.+|.
T Consensus 111 ~vLvvG~E~mS~ 122 (394)
T PRK09051 111 VAIGGGAESMSR 122 (394)
T ss_pred EEEEEeehhccc
Confidence 999999998874
No 50
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=5.3e-11 Score=126.54 Aligned_cols=89 Identities=17% Similarity=0.302 Sum_probs=80.0
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSY 267 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~ 267 (521)
.+|++++|+++|++|+|||.+|++++ +....|..+..++..+|++..+.+++++. +|++++.|+..|..++++|..++
T Consensus 31 ~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~~-~Casg~~ai~~A~~~I~sG~~d~ 109 (393)
T PRK05656 31 AAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNK-VCGSGLKALHLAAQAIRCGDAEV 109 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEecc-cchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999875 33346677888999999985589999995 99999999999999999999999
Q ss_pred EEEEEeccCCC
Q 009966 268 ALVVSTENITM 278 (521)
Q Consensus 268 aLVVs~E~~s~ 278 (521)
+||+++|.+|.
T Consensus 110 vLv~G~E~ms~ 120 (393)
T PRK05656 110 IIAGGQENMSL 120 (393)
T ss_pred EEEEEEhhhcc
Confidence 99999997764
No 51
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.32 E-value=1.1e-10 Score=123.87 Aligned_cols=89 Identities=19% Similarity=0.234 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEecc-CCC--CCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSS-LFN--PTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~--~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
|+.+|++++|+++|++++|||.+|++++ ++. ..|..+.+++..+|++ ...++++++ +|++++.||..|..++++|
T Consensus 25 La~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~-aCasg~~ai~~A~~~I~sG 102 (389)
T PRK06064 25 LAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVEA-ACASGGAALRQAYLAVASG 102 (389)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEeC-CcHHHHHHHHHHHHHHHCC
Confidence 3399999999999999999999998754 343 2477889999999998 788999994 9999999999999999999
Q ss_pred CCCeEEEEEeccCC
Q 009966 264 PDSYALVVSTENIT 277 (521)
Q Consensus 264 ~~~~aLVVs~E~~s 277 (521)
..+++||+++|.+|
T Consensus 103 ~~~~vLv~G~e~~s 116 (389)
T PRK06064 103 EADVVLAAGVEKMT 116 (389)
T ss_pred CCCEEEEEEEEecc
Confidence 99999999999765
No 52
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.32 E-value=1.3e-10 Score=122.43 Aligned_cols=91 Identities=16% Similarity=0.174 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
+|+.+|++++|+++|++++|||.++++++ .....|..+..++.++|++ .+.+++++ .+|++++.++..|..+++++.
T Consensus 18 eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~sG~ 95 (375)
T cd00829 18 ELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIASGL 95 (375)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHHhCC
Confidence 34499999999999999999999998765 4444577889999999997 78999999 599999999999999999999
Q ss_pred CCeEEEEEeccCCC
Q 009966 265 DSYALVVSTENITM 278 (521)
Q Consensus 265 ~~~aLVVs~E~~s~ 278 (521)
.+.+||+++|..+.
T Consensus 96 ~~~vlv~g~e~~s~ 109 (375)
T cd00829 96 ADVVLVVGAEKMSD 109 (375)
T ss_pred CCEEEEEEEeeccc
Confidence 99999999998764
No 53
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.31 E-value=7.4e-11 Score=126.17 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=93.4
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcC----EEEEecc-CCCC-------------------CCcHHHHHHHHcCCCCCeeE
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIG----ILLVNSS-LFNP-------------------TPSLSAMVVNHYKLRGNILS 238 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID----~LI~~ss-~~~~-------------------~Ps~a~~I~~~LGl~~~~~~ 238 (521)
....++..|++++|+++|+++++|| .||++++ .++. .+..+..|+..+|++ ..+
T Consensus 86 ~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~ 163 (424)
T smart00825 86 PQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPS 163 (424)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCc
Confidence 3467889999999999999999998 7777754 2221 445778899999997 478
Q ss_pred EEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----------CC------CCCCccccccccccccceeeE
Q 009966 239 YNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN----------WY------GGNDRSMLLTNCLFRLGGAAI 302 (521)
Q Consensus 239 ~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~----------~~------~~~dr~~lv~~~lFgDGAaAv 302 (521)
+.++. +|++++.||..|.++|++|..+.+||+++|..... +. .+-+.. -...++||||+|+
T Consensus 164 ~~v~~-acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaal 240 (424)
T smart00825 164 VTVDT-ACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVV 240 (424)
T ss_pred ccccc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEE
Confidence 89995 99999999999999999999999999999974320 11 111111 0246899999999
Q ss_pred EEeccC
Q 009966 303 LLSNRS 308 (521)
Q Consensus 303 LLs~~~ 308 (521)
||++.+
T Consensus 241 VLe~~e 246 (424)
T smart00825 241 VLKRLS 246 (424)
T ss_pred EEccHH
Confidence 999754
No 54
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.29 E-value=1.9e-10 Score=122.43 Aligned_cols=89 Identities=16% Similarity=0.210 Sum_probs=76.9
Q ss_pred HHHHHHHHHHc-CCCCCCcCEEEEecc-CCCCCCcHHHHHHH-HcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 189 VGAIDELLAKT-GVKPRDIGILLVNSS-LFNPTPSLSAMVVN-HYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 189 ~~Aa~~aL~~a-gi~p~dID~LI~~ss-~~~~~Ps~a~~I~~-~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
.+|++++|+++ |++|+|||.+|++++ ++...|...+.++. .+|++..+++++++. +|++|+.|+..|..++++|..
T Consensus 36 ~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~-aCaSg~~Al~~A~~~I~sG~~ 114 (399)
T PRK09052 36 AHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNR-FCASGLQAVAMAADRIRVGEA 114 (399)
T ss_pred HHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeecc-hhhHHHHHHHHHHHHHHCCCC
Confidence 99999999997 999999999999864 46555666666554 459984589999995 999999999999999999999
Q ss_pred CeEEEEEeccCCC
Q 009966 266 SYALVVSTENITM 278 (521)
Q Consensus 266 ~~aLVVs~E~~s~ 278 (521)
+.+||+++|.+|.
T Consensus 115 d~vLv~G~E~mS~ 127 (399)
T PRK09052 115 DVMIAAGVESMSM 127 (399)
T ss_pred CEEEEEEEecccc
Confidence 9999999998863
No 55
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.27 E-value=4.8e-10 Score=118.98 Aligned_cols=87 Identities=20% Similarity=0.081 Sum_probs=75.5
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCC--CCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNP--TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
.+|++++|+++|++++|||.+|++++++.. .+..+..|+++||++ ...++++++ +|+++..++..|..+|++|..+
T Consensus 29 ~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~-~casg~~al~~A~~~I~sG~~~ 106 (386)
T PRK08313 29 REAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVHT-AGSVGGSTAVVAASLVQSGVYR 106 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEec-cCHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999988654432 122336899999997 688999995 9999999999999999999999
Q ss_pred eEEEEEeccCC
Q 009966 267 YALVVSTENIT 277 (521)
Q Consensus 267 ~aLVVs~E~~s 277 (521)
+||||++|..+
T Consensus 107 ~vLVvg~e~~s 117 (386)
T PRK08313 107 RVLAVAWEKQS 117 (386)
T ss_pred EEEEEEEEEcc
Confidence 99999999764
No 56
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.26 E-value=4e-10 Score=119.99 Aligned_cols=122 Identities=16% Similarity=0.122 Sum_probs=89.2
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCC-cC----EEEEeccCC-----------------------CCC--CcHHHHHHHHcCC
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRD-IG----ILLVNSSLF-----------------------NPT--PSLSAMVVNHYKL 232 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~d-ID----~LI~~ss~~-----------------------~~~--Ps~a~~I~~~LGl 232 (521)
....++..|++++|+++|+++++ ++ .+++.++.. ... ...+..|...+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45678899999999999998765 33 233333210 111 4567889999999
Q ss_pred CCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC--------------------CCCCCCccccccc
Q 009966 233 RGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN--------------------WYGGNDRSMLLTN 292 (521)
Q Consensus 233 ~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~--------------------~~~~~dr~~lv~~ 292 (521)
+ .-.++.+++ +|++++.||..|.++|++|..+.+||.++|..+.. ...+.|+. -..
T Consensus 151 ~-~Gp~~tv~~-aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~--~~G 226 (407)
T cd00828 151 S-HGPIKTPVG-ACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDET--RDG 226 (407)
T ss_pred C-CCCCcCccc-HHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCC--CCc
Confidence 3 356889995 99999999999999999999999999999986510 00111111 014
Q ss_pred cccccceeeEEEeccC
Q 009966 293 CLFRLGGAAILLSNRS 308 (521)
Q Consensus 293 ~lFgDGAaAvLLs~~~ 308 (521)
+++||||+|+||++.+
T Consensus 227 ~~~gEGAaalvLe~~~ 242 (407)
T cd00828 227 FVEAEGAGVLVLERAE 242 (407)
T ss_pred EEeecceEEEEEeeHH
Confidence 6899999999999854
No 57
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.23 E-value=6.4e-10 Score=118.25 Aligned_cols=121 Identities=13% Similarity=0.144 Sum_probs=88.2
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCE----EEEeccCC------------------C--------CCC-cHHHHHHHHcC
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGI----LLVNSSLF------------------N--------PTP-SLSAMVVNHYK 231 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~----LI~~ss~~------------------~--------~~P-s~a~~I~~~LG 231 (521)
....++..|++++|+++|+++++||. ++++++.. . ..+ ..+..|...+|
T Consensus 70 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T TIGR03150 70 RFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYG 149 (407)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhC
Confidence 34678899999999999999999886 55554211 0 011 24567888899
Q ss_pred CCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----------CC---C--------CCCccccc
Q 009966 232 LRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN----------WY---G--------GNDRSMLL 290 (521)
Q Consensus 232 l~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~----------~~---~--------~~dr~~lv 290 (521)
++ ..++.+.. +|++++.||..|..+|++|..+.+||++.|..... .. . +-|+..
T Consensus 150 l~--g~~~~v~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~-- 224 (407)
T TIGR03150 150 AK--GPNHAVVT-ACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR-- 224 (407)
T ss_pred CC--Cccccccc-HHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC--
Confidence 95 66788885 99999999999999999999999999999963210 00 0 001110
Q ss_pred cccccccceeeEEEeccC
Q 009966 291 TNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 291 ~~~lFgDGAaAvLLs~~~ 308 (521)
..++.||||+|+||++.+
T Consensus 225 ~g~~~gEGAaalvL~~~~ 242 (407)
T TIGR03150 225 DGFVMGEGAGVLVLEELE 242 (407)
T ss_pred CcEEEeceEEEEEEeeHH
Confidence 135789999999999754
No 58
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.22 E-value=1.4e-09 Score=116.86 Aligned_cols=118 Identities=20% Similarity=0.276 Sum_probs=86.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcC------------------EEEEecc----------------CCC-------CCCcH
Q 009966 184 TKAVIVGAIDELLAKTGVKPRDIG------------------ILLVNSS----------------LFN-------PTPSL 222 (521)
Q Consensus 184 a~~l~~~Aa~~aL~~agi~p~dID------------------~LI~~ss----------------~~~-------~~Ps~ 222 (521)
...++..|++++|+++|+++.+.+ .++..+. +.. ..|++
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 345778999999999999654422 1111111 111 35678
Q ss_pred HHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEecc---------------CCCC--C----C
Q 009966 223 SAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTEN---------------ITMN--W----Y 281 (521)
Q Consensus 223 a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~---------------~s~~--~----~ 281 (521)
+..|+.++|++ ..+++++. +|++++.||..|.++|+++..+.+||+++|. ++.. + .
T Consensus 155 a~~i~~~~gl~--G~~~~i~~-aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 231 (425)
T PRK06501 155 ADRLADRFGTR--GLPISLST-ACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231 (425)
T ss_pred HHHHHHHhCCC--CCceeecC-ccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCccc
Confidence 99999999996 67799995 9999999999999999999999999999993 2210 0 0
Q ss_pred CC--CCccccccccccccceeeEEEeccC
Q 009966 282 GG--NDRSMLLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 282 ~~--~dr~~lv~~~lFgDGAaAvLLs~~~ 308 (521)
.+ .+|+ ..++||||+|+||++.+
T Consensus 232 rpfd~~r~----G~v~GEGaaalVLe~~~ 256 (425)
T PRK06501 232 KPFSKDRD----GFVMAEGAGALVLESLE 256 (425)
T ss_pred CCCCCCCC----CeeeeccEEEEEECcHH
Confidence 01 2333 36899999999999754
No 59
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.19 E-value=1.5e-09 Score=115.77 Aligned_cols=119 Identities=20% Similarity=0.210 Sum_probs=91.6
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCE----EEEecc-CCC-------------------CCCcHHHHHHHHcCCCCCeeE
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGI----LLVNSS-LFN-------------------PTPSLSAMVVNHYKLRGNILS 238 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~----LI~~ss-~~~-------------------~~Ps~a~~I~~~LGl~~~~~~ 238 (521)
....++..|++++|+++|++++++|. ++++++ .++ ..+..+..|...+|++ ..+
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 45788999999999999999888774 555543 111 1245678899999997 478
Q ss_pred EEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC-----------------CCCC-CCcccccccccccccee
Q 009966 239 YNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN-----------------WYGG-NDRSMLLTNCLFRLGGA 300 (521)
Q Consensus 239 ~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~-----------------~~~~-~dr~~lv~~~lFgDGAa 300 (521)
+.+.+ +|++++.||..|.++|++|..+.+||+++|..+.. ..+. .+++ ..++||||+
T Consensus 164 ~~v~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~----g~~~geGAa 238 (421)
T cd00833 164 LTVDT-ACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADAD----GYVRGEGVG 238 (421)
T ss_pred eeecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCC----CeeeeceEE
Confidence 89995 99999999999999999999999999999975310 0011 1122 368999999
Q ss_pred eEEEeccC
Q 009966 301 AILLSNRS 308 (521)
Q Consensus 301 AvLLs~~~ 308 (521)
|+||++.+
T Consensus 239 alvL~~~~ 246 (421)
T cd00833 239 VVVLKRLS 246 (421)
T ss_pred EEEEeeHH
Confidence 99999754
No 60
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.17 E-value=1.6e-09 Score=110.27 Aligned_cols=115 Identities=17% Similarity=0.255 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
+|+.+|+++||+++|++++|||.+++++......|+ ..+++.||++ .+++.+ +||++..||.+|..++++|..
T Consensus 56 ~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG~A 128 (334)
T PRK12404 56 KLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSGGA 128 (334)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcCCC
Confidence 455999999999999999999999999877666776 4999999965 489997 999999999999999999999
Q ss_pred CeEEEEEeccCC---CCCCCC----CCccccccccccccceeeEEEeccCC
Q 009966 266 SYALVVSTENIT---MNWYGG----NDRSMLLTNCLFRLGGAAILLSNRSS 309 (521)
Q Consensus 266 ~~aLVVs~E~~s---~~~~~~----~dr~~lv~~~lFgDGAaAvLLs~~~~ 309 (521)
++|||+++--.+ +.|..+ ..|.. +...---||+|+||++...
T Consensus 129 d~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~~ 177 (334)
T PRK12404 129 KYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTGD 177 (334)
T ss_pred CEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCCC
Confidence 999999875543 233332 33432 2334457899999997643
No 61
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.17 E-value=1.1e-09 Score=116.70 Aligned_cols=86 Identities=16% Similarity=0.286 Sum_probs=72.6
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEecc-CCCC---CCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSS-LFNP---TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~---~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
.+|++++|+++|++|+|||.+|+++. +++. .++....+...++ .++.+++++ ++|++++.++..|..++++|.
T Consensus 37 ~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~I~sG~ 113 (394)
T PRK06445 37 AMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAMEIATGM 113 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999864 3332 2344445566665 369999999 599999999999999999999
Q ss_pred CCeEEEEEeccCC
Q 009966 265 DSYALVVSTENIT 277 (521)
Q Consensus 265 ~~~aLVVs~E~~s 277 (521)
.+++||+++|.+|
T Consensus 114 ~d~vLv~G~e~ms 126 (394)
T PRK06445 114 ADIVIAGGVEHMT 126 (394)
T ss_pred CCEEEEeeecccc
Confidence 9999999999766
No 62
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.13 E-value=4e-09 Score=112.40 Aligned_cols=92 Identities=15% Similarity=0.201 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCCC-C-CCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLFN-P-TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~-~-~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
+|+..+++.+++++|++|++||-||++|.... . .+.++-++.-+-||+.++.++.|+ +-|++++.|+.+|.+.+++|
T Consensus 31 ~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I~~G 109 (417)
T PRK06025 31 HLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQIMSG 109 (417)
T ss_pred HHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHHHcC
Confidence 33499999999999999999999999976432 2 477888999999999899999999 79999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 009966 264 PDSYALVVSTENITM 278 (521)
Q Consensus 264 ~~~~aLVVs~E~~s~ 278 (521)
..+-+|..+.|.+|+
T Consensus 110 ~~~~~laGG~EsmS~ 124 (417)
T PRK06025 110 MEDLVIAGGTEMMSY 124 (417)
T ss_pred CCCEEEEeeeeccCC
Confidence 999999999999995
No 63
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.12 E-value=7.3e-09 Score=110.58 Aligned_cols=121 Identities=12% Similarity=0.122 Sum_probs=88.7
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcC----EEEEeccCC------------------C--------CCC-cHHHHHHHHcC
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIG----ILLVNSSLF------------------N--------PTP-SLSAMVVNHYK 231 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID----~LI~~ss~~------------------~--------~~P-s~a~~I~~~LG 231 (521)
....++..|+.++|+++|++++++| .++++++.. . ..+ ..+..|...+|
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (411)
T PRK07314 71 RFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG 150 (411)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC
Confidence 3467889999999999999999888 466654311 0 111 24567889999
Q ss_pred CCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC---------------------CCCCCccccc
Q 009966 232 LRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNW---------------------YGGNDRSMLL 290 (521)
Q Consensus 232 l~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~---------------------~~~~dr~~lv 290 (521)
++ -.++.++. +|++++.||..|.++|++|..+.|||.+.|..+..+ ..+-|+..
T Consensus 151 l~--Gp~~tv~~-acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~-- 225 (411)
T PRK07314 151 AK--GPNHSIVT-ACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR-- 225 (411)
T ss_pred CC--Cccccchh-hhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC--
Confidence 96 46677785 999999999999999999999999999998643210 00111110
Q ss_pred cccccccceeeEEEeccC
Q 009966 291 TNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 291 ~~~lFgDGAaAvLLs~~~ 308 (521)
..+++||||+|+||++.+
T Consensus 226 dG~~~geGAaavvL~~~~ 243 (411)
T PRK07314 226 DGFVMGEGAGILVLEELE 243 (411)
T ss_pred CCEeEEceEEEEEEeeHH
Confidence 136899999999999754
No 64
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.11 E-value=5.2e-09 Score=112.25 Aligned_cols=119 Identities=19% Similarity=0.217 Sum_probs=86.4
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCc-C----EEEEeccC-C---------------------CCCC-----cHHHHHHHHc
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDI-G----ILLVNSSL-F---------------------NPTP-----SLSAMVVNHY 230 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dI-D----~LI~~ss~-~---------------------~~~P-----s~a~~I~~~L 230 (521)
....++..|++++|+++|++++++ + .++++++. . +..| ..+..|...|
T Consensus 81 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 160 (424)
T PRK06333 81 RFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRY 160 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHh
Confidence 456788999999999999988776 3 34454431 1 0011 2356788899
Q ss_pred CCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC----------CC------------C--CCc
Q 009966 231 KLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNW----------YG------------G--NDR 286 (521)
Q Consensus 231 Gl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~----------~~------------~--~dr 286 (521)
|++ -.++.++. +|++++.||..|..+|++|..+.+||+++|.....+ +. + .++
T Consensus 161 gl~--Gp~~~v~~-aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~ 237 (424)
T PRK06333 161 GFK--GPLGAPVT-ACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDR 237 (424)
T ss_pred CCC--CCCccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCC
Confidence 996 66777885 999999999999999999999999999999732100 10 0 112
Q ss_pred cccccccccccceeeEEEeccC
Q 009966 287 SMLLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 287 ~~lv~~~lFgDGAaAvLLs~~~ 308 (521)
+ ..+.||||+++||++.+
T Consensus 238 ~----G~~~gEGaa~lvLe~~~ 255 (424)
T PRK06333 238 D----GFVMGEGAGILVIETLE 255 (424)
T ss_pred C----CeEEecceEEEEEeeHH
Confidence 2 35689999999998754
No 65
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.10 E-value=6.4e-09 Score=110.60 Aligned_cols=91 Identities=14% Similarity=0.158 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCC-CCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSS-LFNP-TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
|+.+|++++|+++|+.++|||.+|++++ ++.. .+.++.+++..+|++..+.+++++. +|++|+.|+..|...+++|.
T Consensus 30 La~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~~-aCaSG~~Al~~A~~~I~sG~ 108 (391)
T PRK07661 30 LGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINR-YCSSGLQSIAYGAERIMLGH 108 (391)
T ss_pred HHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehhh-hhhHHHHHHHHHHHHHHcCC
Confidence 3399999999999988899999999864 3333 4777778999999985699999995 99999999999999999999
Q ss_pred CCeEEEEEeccCCC
Q 009966 265 DSYALVVSTENITM 278 (521)
Q Consensus 265 ~~~aLVVs~E~~s~ 278 (521)
.+.+||++.|.+|.
T Consensus 109 ~d~vLv~G~E~ms~ 122 (391)
T PRK07661 109 SEAVIAGGAESMSL 122 (391)
T ss_pred CCEEEEEEEeeccc
Confidence 99999999998763
No 66
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.08 E-value=4.4e-09 Score=110.60 Aligned_cols=89 Identities=16% Similarity=0.191 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 185 KAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
++|+..|++++++ |++ +|||.+|+++.... .+..+..+....|++..+.++.++. +|++++.|+..|.+++++|.
T Consensus 26 ~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~~-~CaSG~~Ai~~a~~~I~sG~ 100 (361)
T PRK06690 26 QQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTIDR-QCGAGLEAIRTACHFIQGGA 100 (361)
T ss_pred HHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehhh-hhhHHHHHHHHHHHHHHCCC
Confidence 3444999999855 896 89999999865321 2444556889999986799999995 99999999999999999999
Q ss_pred CCeEEEEEeccCCC
Q 009966 265 DSYALVVSTENITM 278 (521)
Q Consensus 265 ~~~aLVVs~E~~s~ 278 (521)
.+.+||++.|.+|.
T Consensus 101 ~d~~l~gG~E~ms~ 114 (361)
T PRK06690 101 GKCYIAGGVESTST 114 (361)
T ss_pred CCEEEEeccccccC
Confidence 99999999999874
No 67
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.06 E-value=6.8e-10 Score=117.85 Aligned_cols=91 Identities=16% Similarity=0.272 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
|+.+|++++|+++|++++|||.+|+++. ++...|..+..++..+|++.++.++++++ +|++++.++.+|.+++++|..
T Consensus 24 La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~-~Casg~~al~~A~~~I~sG~~ 102 (386)
T TIGR01930 24 LGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVNR-QCASGLQAVILAAQLIRAGEA 102 (386)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeecc-hhhHHHHHHHHHHHHHHCCCC
Confidence 3399999999999999999999998764 45545777888999999985689999994 999999999999999999999
Q ss_pred CeEEEEEeccCCC
Q 009966 266 SYALVVSTENITM 278 (521)
Q Consensus 266 ~~aLVVs~E~~s~ 278 (521)
+++||+++|.+|.
T Consensus 103 ~~vLv~g~e~~s~ 115 (386)
T TIGR01930 103 DVVVAGGVESMSR 115 (386)
T ss_pred CEEEEEEehhhcc
Confidence 9999999998775
No 68
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.03 E-value=1e-09 Score=116.71 Aligned_cols=89 Identities=13% Similarity=0.196 Sum_probs=81.5
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCc-HHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPS-LSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
..|++++|+++|++|+|||.+|+++. ++...|+ .+..+..++|++.++++++++ .+|++++.||.+|..++++|..+
T Consensus 32 ~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~sG~~d 110 (392)
T PRK07108 32 GHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVIAGEGD 110 (392)
T ss_pred HHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999864 4555554 888999999998779999999 59999999999999999999999
Q ss_pred eEEEEEeccCCC
Q 009966 267 YALVVSTENITM 278 (521)
Q Consensus 267 ~aLVVs~E~~s~ 278 (521)
.+||++.|.+|.
T Consensus 111 ~vlagGvE~ms~ 122 (392)
T PRK07108 111 VFVAGGVESISC 122 (392)
T ss_pred EEEEEEEeccCC
Confidence 999999999985
No 69
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.99 E-value=3.9e-08 Score=105.10 Aligned_cols=119 Identities=18% Similarity=0.177 Sum_probs=87.9
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCE----EEEeccCC--------------------------CCCC-cHHHHHHHHcC
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGI----LLVNSSLF--------------------------NPTP-SLSAMVVNHYK 231 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~----LI~~ss~~--------------------------~~~P-s~a~~I~~~LG 231 (521)
....++..|+.++|+++|+++++++. ++++++.. ...| ..+..|...+|
T Consensus 71 ~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (406)
T PRK08439 71 RFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHG 150 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhC
Confidence 45788899999999999999877763 44433210 0112 46778999999
Q ss_pred CCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccC-CC---------CC-----------CCC--CCccc
Q 009966 232 LRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENI-TM---------NW-----------YGG--NDRSM 288 (521)
Q Consensus 232 l~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~-s~---------~~-----------~~~--~dr~~ 288 (521)
++ -.++.+.. +|++++.||..|.++|++|..+.+||+++|.. +. .. ..+ .+++
T Consensus 151 l~--Gp~~~~~~-acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~- 226 (406)
T PRK08439 151 LK--GPNLSSVT-ACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRD- 226 (406)
T ss_pred CC--CCcccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCC-
Confidence 98 45677774 99999999999999999999999999999963 21 00 001 1223
Q ss_pred cccccccccceeeEEEeccC
Q 009966 289 LLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 289 lv~~~lFgDGAaAvLLs~~~ 308 (521)
..++|+||+++||++.+
T Consensus 227 ---G~v~gEGa~~lvLe~~~ 243 (406)
T PRK08439 227 ---GFVMGEGAGALVLEEYE 243 (406)
T ss_pred ---cEEeeCceEEEEEccHH
Confidence 36889999999999754
No 70
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=98.98 E-value=1.7e-09 Score=115.41 Aligned_cols=89 Identities=17% Similarity=0.269 Sum_probs=82.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSY 267 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~ 267 (521)
.+|++++|+++|++|+|||.+|++++ +....|.++..++..+|++.++.+++++ .+|++++.|+..|.+++++|..+.
T Consensus 31 ~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~sG~~d~ 109 (404)
T PRK06205 31 ATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQTGAADV 109 (404)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999865 5566788888999999998678999999 599999999999999999999999
Q ss_pred EEEEEeccCCC
Q 009966 268 ALVVSTENITM 278 (521)
Q Consensus 268 aLVVs~E~~s~ 278 (521)
+||++.|.+|.
T Consensus 110 vLv~G~E~ms~ 120 (404)
T PRK06205 110 VIAGGAESMSN 120 (404)
T ss_pred EEEeeehhhcc
Confidence 99999999885
No 71
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=98.97 E-value=2.5e-09 Score=113.81 Aligned_cols=89 Identities=16% Similarity=0.193 Sum_probs=78.7
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSY 267 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~ 267 (521)
.+|++++|+++|++|+|||.+|+++. +....+..+..++..+|++.++++++++. +|++|+.|+..|..++++|..++
T Consensus 31 ~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~~-~CaSg~~Al~~A~~~I~sG~~d~ 109 (393)
T PRK08235 31 GIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNK-VCASGLRAVTLADQIIRAGDASV 109 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehhh-hhhHHHHHHHHHHHHHHCCCCCE
Confidence 99999999999999999999999875 32124455567889999976799999995 99999999999999999999999
Q ss_pred EEEEEeccCCC
Q 009966 268 ALVVSTENITM 278 (521)
Q Consensus 268 aLVVs~E~~s~ 278 (521)
+||+++|.+|.
T Consensus 110 vLvvG~E~ms~ 120 (393)
T PRK08235 110 IVAGGMESMSN 120 (393)
T ss_pred EEEEeeecccc
Confidence 99999999885
No 72
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=98.95 E-value=3.3e-09 Score=113.04 Aligned_cols=90 Identities=13% Similarity=0.239 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCC-CcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSS-LFNPT-PSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~-Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
+..|++++|+++|++|+|||.+|++|. +.... +..+.......|++.++.+++++ .+|++++.||.+|.+++++|..
T Consensus 32 a~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~sG~~ 110 (402)
T PRK08242 32 AAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVRSGWD 110 (402)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHHcCCC
Confidence 399999999999999999999999865 44333 34556666788997679999999 5999999999999999999999
Q ss_pred CeEEEEEeccCCC
Q 009966 266 SYALVVSTENITM 278 (521)
Q Consensus 266 ~~aLVVs~E~~s~ 278 (521)
+++||+++|.+|.
T Consensus 111 d~vLv~G~E~mS~ 123 (402)
T PRK08242 111 DLVIAGGVESMSR 123 (402)
T ss_pred CEEEEEEEEccCC
Confidence 9999999999986
No 73
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.95 E-value=7.7e-08 Score=103.16 Aligned_cols=119 Identities=14% Similarity=0.138 Sum_probs=85.9
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcC----EEEEeccC-C-----------------C--------CCC-cHHHHHHHHcC
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIG----ILLVNSSL-F-----------------N--------PTP-SLSAMVVNHYK 231 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID----~LI~~ss~-~-----------------~--------~~P-s~a~~I~~~LG 231 (521)
....++..|+.++|+++|+++++.+ .++++++. . . ..| ..+..|...+|
T Consensus 73 ~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~g 152 (414)
T PRK08722 73 LFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRG 152 (414)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhC
Confidence 3456788999999999999754332 24444321 0 0 112 36788888999
Q ss_pred CCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC----------CC-----------CC--Cccc
Q 009966 232 LRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNW----------YG-----------GN--DRSM 288 (521)
Q Consensus 232 l~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~----------~~-----------~~--dr~~ 288 (521)
++ -.++.++. +|++++.||..|.++|+.|..+.+||.++|.....+ .. +- +|+
T Consensus 153 l~--Gp~~ti~~-aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~- 228 (414)
T PRK08722 153 LR--GPNIAIST-ACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRD- 228 (414)
T ss_pred CC--CCcccccc-ccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCC-
Confidence 97 56777885 999999999999999999999999999999753210 10 11 122
Q ss_pred cccccccccceeeEEEeccC
Q 009966 289 LLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 289 lv~~~lFgDGAaAvLLs~~~ 308 (521)
..+.|||++++||++..
T Consensus 229 ---G~~~gEGaaalvLe~~~ 245 (414)
T PRK08722 229 ---GFVLGDGAGMMVLEEYE 245 (414)
T ss_pred ---ceEeeceEEEEEEccHH
Confidence 36789999999999754
No 74
>PRK06059 lipid-transfer protein; Provisional
Probab=98.95 E-value=2.8e-09 Score=113.67 Aligned_cols=91 Identities=19% Similarity=0.143 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEecc-C-CCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSS-L-FNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss-~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
+|+.+|++++|+++|++++|||.||++++ + .+..|..+..++.++|++ .+.++++++ +|++++.+|..|.++++++
T Consensus 25 ~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~~-~Casg~~al~~A~~~I~sG 102 (399)
T PRK06059 25 EYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSYA-ACASGSQALQSARAQILAG 102 (399)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceecccc-hhHHHHHHHHHHHHHHHCC
Confidence 34499999999999999999999998754 2 344456678999999997 588999995 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 009966 264 PDSYALVVSTENITM 278 (521)
Q Consensus 264 ~~~~aLVVs~E~~s~ 278 (521)
..+++|||++|..+.
T Consensus 103 ~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 103 LCDVALVVGADTTPK 117 (399)
T ss_pred CCCEEEEEEEcccCC
Confidence 999999999998764
No 75
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.93 E-value=2.6e-08 Score=106.56 Aligned_cols=120 Identities=17% Similarity=0.241 Sum_probs=85.6
Q ss_pred hHHHHHHHHHHHHHHcCCC---CCCcCEEEEecc----------------CCCCCC---------cHHHHHHHHcCCCCC
Q 009966 184 TKAVIVGAIDELLAKTGVK---PRDIGILLVNSS----------------LFNPTP---------SLSAMVVNHYKLRGN 235 (521)
Q Consensus 184 a~~l~~~Aa~~aL~~agi~---p~dID~LI~~ss----------------~~~~~P---------s~a~~I~~~LGl~~~ 235 (521)
...++..|++++|+++|++ +++|++++-++. +.+..| ..+..|+..||++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 4567899999999999986 466776664432 111122 2566788999997
Q ss_pred eeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccC-CCC----------------------CCCCCCccccccc
Q 009966 236 ILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENI-TMN----------------------WYGGNDRSMLLTN 292 (521)
Q Consensus 236 ~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~-s~~----------------------~~~~~dr~~lv~~ 292 (521)
..++.+++ +|++++.||..|.++|+++..+.+||+++|.. +.. ...+-|+. -..
T Consensus 158 G~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~--~dG 234 (410)
T PRK07103 158 GEGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQD--RDG 234 (410)
T ss_pred CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCC--CCC
Confidence 46778886 99999999999999999999999999998641 110 00011111 013
Q ss_pred cccccceeeEEEeccC
Q 009966 293 CLFRLGGAAILLSNRS 308 (521)
Q Consensus 293 ~lFgDGAaAvLLs~~~ 308 (521)
.++||||+|+||++.+
T Consensus 235 ~v~gEGaaalvLe~~~ 250 (410)
T PRK07103 235 FIYGEACGAVVLESAE 250 (410)
T ss_pred eeEeeeEEEEEEccHH
Confidence 6889999999999754
No 76
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=98.92 E-value=4.8e-09 Score=111.29 Aligned_cols=88 Identities=20% Similarity=0.224 Sum_probs=76.4
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccC-CCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSL-FNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSY 267 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~ 267 (521)
.+|++++|+++|++++|||.+|++++. ....+..+..++..+|++ +..+++++ ++|++++.||.+|..++++|..++
T Consensus 26 ~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~sG~~~~ 103 (385)
T PRK12578 26 WESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVASGLVDM 103 (385)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHCCCCCE
Confidence 999999999999999999999988643 222233478899999998 46779999 599999999999999999999999
Q ss_pred EEEEEeccCCC
Q 009966 268 ALVVSTENITM 278 (521)
Q Consensus 268 aLVVs~E~~s~ 278 (521)
+|||++|.+|.
T Consensus 104 vLvvg~e~~s~ 114 (385)
T PRK12578 104 AIAVGVDKMTE 114 (385)
T ss_pred EEEEEEeeccc
Confidence 99999998763
No 77
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.88 E-value=7.9e-09 Score=111.12 Aligned_cols=91 Identities=14% Similarity=0.260 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
|+.+|++++|+++|++|+|||.+|+++. +....+..+..++..+|++.++.+++++. +|++++.++..|..++++|..
T Consensus 30 L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~-~CaSg~~al~~A~~~I~sG~~ 108 (426)
T PRK08170 30 LAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQR-NCASGMQALDSAAANIALGRA 108 (426)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccc-hhhHHHHHHHHHHHHHHCCCC
Confidence 3399999999999999999999998754 33334677888999999975789999995 999999999999999999999
Q ss_pred CeEEEEEeccCCC
Q 009966 266 SYALVVSTENITM 278 (521)
Q Consensus 266 ~~aLVVs~E~~s~ 278 (521)
+++||+++|.+|.
T Consensus 109 d~vLv~G~E~ms~ 121 (426)
T PRK08170 109 DLVLAGGVEAMSH 121 (426)
T ss_pred CEEEEEEEecccC
Confidence 9999999998875
No 78
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.87 E-value=8.4e-09 Score=109.79 Aligned_cols=92 Identities=15% Similarity=0.145 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHH-HHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhc
Q 009966 185 KAVIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAM-VVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~-I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
.+++..|++++|+++|++|+|||.+|++++ ++...+..+.. +++.+|+. ++.+++++. +|++++.|+..|..++++
T Consensus 24 ~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~~-~Casg~~al~~A~~~I~s 101 (393)
T cd00826 24 HEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMNN-LCGSGLRALALAMQLIAG 101 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEecc-hhHHHHHHHHHHHHHHHC
Confidence 344499999999999999999999999865 44444566553 67778886 799999995 999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009966 263 TPDSYALVVSTENITM 278 (521)
Q Consensus 263 ~~~~~aLVVs~E~~s~ 278 (521)
+..+.+||+++|.+|.
T Consensus 102 G~~~~vlv~g~e~~s~ 117 (393)
T cd00826 102 GDANCILAGGFEKMET 117 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999999874
No 79
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.86 E-value=1.9e-07 Score=99.03 Aligned_cols=115 Identities=19% Similarity=0.265 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHcCCCC--CCcCEEEEeccCC--------------------C--------CCC-cHHHHHHHHcCCCCC
Q 009966 187 VIVGAIDELLAKTGVKP--RDIGILLVNSSLF--------------------N--------PTP-SLSAMVVNHYKLRGN 235 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p--~dID~LI~~ss~~--------------------~--------~~P-s~a~~I~~~LGl~~~ 235 (521)
++..|++++|+++|+++ +++++++-++... . ..| ..+..|...+|++
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~-- 136 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ-- 136 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC--
Confidence 44689999999999964 5565554332110 0 122 2467788899997
Q ss_pred eeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEecc-CCCC---------------CCC-CCCccccccccccccc
Q 009966 236 ILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTEN-ITMN---------------WYG-GNDRSMLLTNCLFRLG 298 (521)
Q Consensus 236 ~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~-~s~~---------------~~~-~~dr~~lv~~~lFgDG 298 (521)
-+++.+.+ +|++++.||..|.++|+.+..+.+||.++|. .+.. ..+ ..+|+ ..++|||
T Consensus 137 Gp~~ti~~-aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~----G~v~gEG 211 (381)
T PRK05952 137 GPVLAPMA-ACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQRE----GLVLGEG 211 (381)
T ss_pred Cccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCC----Ccccccc
Confidence 46788885 9999999999999999999999999999996 3320 000 01233 3689999
Q ss_pred eeeEEEeccC
Q 009966 299 GAAILLSNRS 308 (521)
Q Consensus 299 AaAvLLs~~~ 308 (521)
|+++||++.+
T Consensus 212 aa~lvLe~~~ 221 (381)
T PRK05952 212 GAILVLESAE 221 (381)
T ss_pred EEEEEEeeHH
Confidence 9999999754
No 80
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=98.82 E-value=1.4e-08 Score=108.23 Aligned_cols=91 Identities=14% Similarity=0.156 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
|+..|++++|+++|++|+|||.+|++++ +.....+.+......+|++.++.+++++ .+|++|+.|+..|..++++|..
T Consensus 34 L~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~sG~~ 112 (397)
T PRK06954 34 LGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVAGSV 112 (397)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHCCCC
Confidence 3399999999999999999999999865 3333334444444556777679999999 5999999999999999999999
Q ss_pred CeEEEEEeccCCC
Q 009966 266 SYALVVSTENITM 278 (521)
Q Consensus 266 ~~aLVVs~E~~s~ 278 (521)
+.+||+++|.+|.
T Consensus 113 d~vLv~G~E~ms~ 125 (397)
T PRK06954 113 DVIVAGGMESMTN 125 (397)
T ss_pred CEEEEEeeeccCC
Confidence 9999999999984
No 81
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.82 E-value=8.2e-07 Score=98.01 Aligned_cols=118 Identities=19% Similarity=0.208 Sum_probs=84.8
Q ss_pred HhHHHHHHHHHHHHHHcCCCCC--------CcCEEEEeccC-C------------------CC------CC-cHHHHHHH
Q 009966 183 ETKAVIVGAIDELLAKTGVKPR--------DIGILLVNSSL-F------------------NP------TP-SLSAMVVN 228 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~--------dID~LI~~ss~-~------------------~~------~P-s~a~~I~~ 228 (521)
....++..|++++|+++|++++ .++ |+++++. . .+ .+ ..+.+|..
T Consensus 198 ~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~G-V~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~ 276 (540)
T PLN02787 198 KFMLYLLTAGKKALADGGITEDVMKELDKTKCG-VLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAM 276 (540)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCCceE-EEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHH
Confidence 3456788999999999999764 233 4444431 0 00 11 23578889
Q ss_pred HcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC---------------------CCC--CC
Q 009966 229 HYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNW---------------------YGG--ND 285 (521)
Q Consensus 229 ~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~---------------------~~~--~d 285 (521)
.+|++ -.++.++. +|++++.||..|.++|+.|..+.+||.++|.....+ ..+ .+
T Consensus 277 ~~gl~--Gp~~tist-ACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~ 353 (540)
T PLN02787 277 DLGWM--GPNYSIST-ACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMN 353 (540)
T ss_pred HhCCC--CCcccccc-ccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccC
Confidence 99997 56778885 999999999999999999999999999999631100 001 12
Q ss_pred ccccccccccccceeeEEEeccC
Q 009966 286 RSMLLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 286 r~~lv~~~lFgDGAaAvLLs~~~ 308 (521)
|+ ..++|+||+++||++.+
T Consensus 354 rd----Gfv~GEGAa~lVLE~~e 372 (540)
T PLN02787 354 RD----GFVMGEGAGVLLLEELE 372 (540)
T ss_pred CC----CcccccceEEEEEeeHH
Confidence 33 46899999999999744
No 82
>PRK05790 putative acyltransferase; Provisional
Probab=98.82 E-value=1.8e-08 Score=107.16 Aligned_cols=89 Identities=13% Similarity=0.231 Sum_probs=76.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSY 267 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~ 267 (521)
.+|++++|+++|++|+|||.+|+++. +....+..+..++..+|++.++.+++++. +|++++.||..|..++++|..++
T Consensus 31 ~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~-~Casg~~al~~A~~~I~sG~~d~ 109 (393)
T PRK05790 31 AIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTINK-VCGSGLKAVALAAQAIRAGDADI 109 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeecc-cchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998764 22234445556777889975688999995 99999999999999999999999
Q ss_pred EEEEEeccCCC
Q 009966 268 ALVVSTENITM 278 (521)
Q Consensus 268 aLVVs~E~~s~ 278 (521)
+||++.|.+|.
T Consensus 110 vLv~G~e~~s~ 120 (393)
T PRK05790 110 VVAGGQESMSQ 120 (393)
T ss_pred EEEEeeecccc
Confidence 99999998763
No 83
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.81 E-value=1.1e-06 Score=93.56 Aligned_cols=81 Identities=21% Similarity=0.189 Sum_probs=64.9
Q ss_pred CcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC--------------CCCC--
Q 009966 220 PSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN--------------WYGG-- 283 (521)
Q Consensus 220 Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~--------------~~~~-- 283 (521)
++.+..|+..||++ -.++.++. +|++++.||..|.++|++|..+.+||+++|..+.. +..+
T Consensus 137 ~~~a~~ia~~lgl~--Gp~~~i~~-acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLS--GPAYTIST-ACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCC--CCcccccC-hhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 45788899999997 37888885 99999999999999999999999999999965431 0011
Q ss_pred CCccccccccccccceeeEEEecc
Q 009966 284 NDRSMLLTNCLFRLGGAAILLSNR 307 (521)
Q Consensus 284 ~dr~~lv~~~lFgDGAaAvLLs~~ 307 (521)
.+++ ..++|||++++||++.
T Consensus 214 ~~~~----G~~~gEGaa~vVLe~~ 233 (392)
T PRK09185 214 ANRD----GINIGEAAAFFLLERE 233 (392)
T ss_pred CCCC----ccceeceEEEEEEEEc
Confidence 1222 3689999999999986
No 84
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.81 E-value=6.3e-07 Score=95.67 Aligned_cols=119 Identities=17% Similarity=0.158 Sum_probs=84.7
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcC----EEEEeccC-C-----------------CCCC---------cHHHHHHHHcC
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIG----ILLVNSSL-F-----------------NPTP---------SLSAMVVNHYK 231 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID----~LI~~ss~-~-----------------~~~P---------s~a~~I~~~LG 231 (521)
-...++..|+.++|+++|+++++++ .|+++++. . ...| ..+..|...+|
T Consensus 70 ~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (399)
T cd00832 70 RMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHG 149 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhC
Confidence 3567889999999999999876433 24444321 1 0011 24678889999
Q ss_pred CCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----------CCC----------C--CCcccc
Q 009966 232 LRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN----------WYG----------G--NDRSML 289 (521)
Q Consensus 232 l~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~----------~~~----------~--~dr~~l 289 (521)
++ -.++.++. +|++++.||..|.++|+.+. +.+||.++|..... ... + .+++
T Consensus 150 l~--Gp~~ti~~-acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~-- 223 (399)
T cd00832 150 MR--GPSGVVVA-EQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAA-- 223 (399)
T ss_pred CC--CCcccccc-hhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCC--
Confidence 97 56777885 99999999999999999999 99999998873210 010 1 1222
Q ss_pred ccccccccceeeEEEeccCC
Q 009966 290 LTNCLFRLGGAAILLSNRSS 309 (521)
Q Consensus 290 v~~~lFgDGAaAvLLs~~~~ 309 (521)
..+.|+||++++|++.+.
T Consensus 224 --G~~~gEGa~~lvLe~~~~ 241 (399)
T cd00832 224 --GYVPGEGGAILVLEDAAA 241 (399)
T ss_pred --CEeeeceEEEEEEeeHHH
Confidence 368899999999997543
No 85
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.80 E-value=2e-08 Score=106.88 Aligned_cols=86 Identities=13% Similarity=0.046 Sum_probs=76.3
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCC--CCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNP--TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.+|+. ...++++.+ ||+++..++..|...+++|..+
T Consensus 34 ~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~-~gasG~~al~~A~~~I~sG~ad 111 (392)
T PRK06065 34 WEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVYV-GGATGVMTAIAGWYHVASGLCQ 111 (392)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEec-CchhHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999987644322 566888899999997 588999995 8988899999999999999999
Q ss_pred eEEEEEeccC
Q 009966 267 YALVVSTENI 276 (521)
Q Consensus 267 ~aLVVs~E~~ 276 (521)
+||||+.|..
T Consensus 112 ~vLVvg~e~~ 121 (392)
T PRK06065 112 KVLAVAEEKM 121 (392)
T ss_pred EEEEEEeecc
Confidence 9999999974
No 86
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.78 E-value=2.9e-08 Score=100.13 Aligned_cols=92 Identities=16% Similarity=0.283 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
+|+..|++++|++++++|++||.+|++|. +....+..+..+.-..|++..++++.++ ..|++++.|+..|...+++|.
T Consensus 28 ~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~sG~ 106 (264)
T PF00108_consen 28 DLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIASGE 106 (264)
T ss_dssp HHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhcCCC
Confidence 34499999999999999999999999975 4444777888888889998889999999 599999999999999999999
Q ss_pred CCeEEEEEeccCCC
Q 009966 265 DSYALVVSTENITM 278 (521)
Q Consensus 265 ~~~aLVVs~E~~s~ 278 (521)
.+.+|+++.|.+|.
T Consensus 107 ~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 107 ADVVLAGGVESMSR 120 (264)
T ss_dssp -SEEEEEEEEETTT
T ss_pred ccEEEEeccccccc
Confidence 99999999999987
No 87
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.76 E-value=2.9e-07 Score=98.41 Aligned_cols=117 Identities=16% Similarity=0.185 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHHHHHcCCCC------CCcCEEEEeccCC------------------C--------CCC-cHHHHHHHHc
Q 009966 184 TKAVIVGAIDELLAKTGVKP------RDIGILLVNSSLF------------------N--------PTP-SLSAMVVNHY 230 (521)
Q Consensus 184 a~~l~~~Aa~~aL~~agi~p------~dID~LI~~ss~~------------------~--------~~P-s~a~~I~~~L 230 (521)
...++..|++++|+++|+.. +++++ +++++.. . ..| ..+..|...+
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv-~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGI-AYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEE-EEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 45678999999999999842 23444 4443210 0 123 2577889999
Q ss_pred CCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----C----------------CCC--CCccc
Q 009966 231 KLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN----W----------------YGG--NDRSM 288 (521)
Q Consensus 231 Gl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~----~----------------~~~--~dr~~ 288 (521)
|++ -.++.++. +|++++.||..|.++|+.+..+.+||.++|..+.. | ..+ .+|+
T Consensus 152 ~~~--Gp~~ti~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~- 227 (405)
T PRK09116 152 GLK--GRVIPTSS-ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRD- 227 (405)
T ss_pred CCC--CCcccccc-hhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCC-
Confidence 997 56778885 99999999999999999999999999999975420 0 001 1222
Q ss_pred cccccccccceeeEEEeccC
Q 009966 289 LLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 289 lv~~~lFgDGAaAvLLs~~~ 308 (521)
.++.|+||+++||++.+
T Consensus 228 ---G~v~gEGa~~~vLe~~~ 244 (405)
T PRK09116 228 ---GLVIGEGAGTLVLEELE 244 (405)
T ss_pred ---CEeeeccEEEEEEccHH
Confidence 46789999999999643
No 88
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.72 E-value=6.6e-07 Score=96.13 Aligned_cols=117 Identities=17% Similarity=0.147 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHcCCC-CCCcCE----EEEeccCCC------------------C--------CC-cHHHHHHHHcCC
Q 009966 185 KAVIVGAIDELLAKTGVK-PRDIGI----LLVNSSLFN------------------P--------TP-SLSAMVVNHYKL 232 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~-p~dID~----LI~~ss~~~------------------~--------~P-s~a~~I~~~LGl 232 (521)
..++..|++++|+++|++ +++++. +++.++... . .+ ..+..|...+|+
T Consensus 78 ~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~l 157 (421)
T PTZ00050 78 THFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKL 157 (421)
T ss_pred HHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhCC
Confidence 455699999999999998 666553 333332110 0 11 245678888898
Q ss_pred CCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC----------C------------C--CCCccc
Q 009966 233 RGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNW----------Y------------G--GNDRSM 288 (521)
Q Consensus 233 ~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~----------~------------~--~~dr~~ 288 (521)
+ -.++.++. +|++++.||..|.++|++|..+.+||.++|.....+ + . ..+++
T Consensus 158 ~--Gp~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~- 233 (421)
T PTZ00050 158 K--GPSGSAVT-ACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRA- 233 (421)
T ss_pred C--Cccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCC-
Confidence 7 56678885 999999999999999999999999999999632100 0 0 01122
Q ss_pred cccccccccceeeEEEeccC
Q 009966 289 LLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 289 lv~~~lFgDGAaAvLLs~~~ 308 (521)
..+.||||+|+||++.+
T Consensus 234 ---G~~~gEGAaalvLe~~~ 250 (421)
T PTZ00050 234 ---GFVMGEGAGILVLEELE 250 (421)
T ss_pred ---CEeeccceEEEEEeeHH
Confidence 46789999999999754
No 89
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.70 E-value=2.2e-06 Score=91.76 Aligned_cols=118 Identities=14% Similarity=0.277 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCC-----cCEEEEeccCC------------------C--------CCC-cHHHHHHHHcC
Q 009966 184 TKAVIVGAIDELLAKTGVKPRD-----IGILLVNSSLF------------------N--------PTP-SLSAMVVNHYK 231 (521)
Q Consensus 184 a~~l~~~Aa~~aL~~agi~p~d-----ID~LI~~ss~~------------------~--------~~P-s~a~~I~~~LG 231 (521)
...++..|++++|+++|+++++ +++++-.+... . ..| ..+..|...||
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 4467789999999999987543 44444222111 0 111 25778999999
Q ss_pred CCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCC---------------------CC--CCccc
Q 009966 232 LRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWY---------------------GG--NDRSM 288 (521)
Q Consensus 232 l~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~~---------------------~~--~dr~~ 288 (521)
++ -.++.++. +|++++.||..|.++|+.|..+.+||.++|..+..+. .+ .+|+
T Consensus 151 l~--Gp~~tvs~-aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~- 226 (406)
T PRK07967 151 IK--GVNYSISS-ACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRD- 226 (406)
T ss_pred CC--CCcccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCC-
Confidence 97 56667885 9999999999999999999999999999987542100 01 1222
Q ss_pred cccccccccceeeEEEeccC
Q 009966 289 LLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 289 lv~~~lFgDGAaAvLLs~~~ 308 (521)
..+.|+||+++||++.+
T Consensus 227 ---G~v~gEGaa~lvLe~~~ 243 (406)
T PRK07967 227 ---GFVIAGGGGVVVVEELE 243 (406)
T ss_pred ---ceeeeceEEEEEEeeHH
Confidence 36789999999998744
No 90
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.66 E-value=3e-06 Score=91.01 Aligned_cols=184 Identities=14% Similarity=0.088 Sum_probs=110.6
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcC-CCC--HHHHHHHHHHHHHhCCccEE--eCCCCCCCCCCCchhHHHHH
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNG-YFT--EESLAFQKKVVERSGIGKMS--GGPKSLFDNPLDNKNMALAM 181 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~-~~~--~~~~~f~~ki~~~sGi~~r~--~~~~~~~~~p~~~~~la~~~ 181 (521)
++|.|+|+|+..|-. .+.++|-+.+..-. .+. +++ -.++.++..+. ..+.+. . +.-........
T Consensus 12 ~~VvItGig~~sp~g---~~~~~~w~~L~~G~s~i~~~~~~------~~~~~~~~~~~~g~i~~~~-d-~~~~~~~~~~~ 80 (418)
T PRK07910 12 PNVVVTGIAMTTALA---TDAETTWKLLLDGQSGIRTLDDP------FVEEFDLPVRIGGHLLEEF-D-HQLTRVELRRM 80 (418)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHcCCCeeEeCChh------hhhccCCCcceEEEeccCc-c-ccCCHHHHhhc
Confidence 579999999999983 57888877664310 011 010 01111222111 111110 0 00001111111
Q ss_pred HHhHHHHHHHHHHHHHHcCC---CCCCcCEEEEeccCCC-------------------------CCC-cHHHHHHHHcCC
Q 009966 182 KETKAVIVGAIDELLAKTGV---KPRDIGILLVNSSLFN-------------------------PTP-SLSAMVVNHYKL 232 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~agi---~p~dID~LI~~ss~~~-------------------------~~P-s~a~~I~~~LGl 232 (521)
.....++..|+.++|+++|+ +++++++++-.+.... ..| ..+..|...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 23556889999999999996 5566665543321110 012 245667778888
Q ss_pred CCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----------C-CC-----------C--CCccc
Q 009966 233 RGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN----------W-YG-----------G--NDRSM 288 (521)
Q Consensus 233 ~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~----------~-~~-----------~--~dr~~ 288 (521)
+ -.++.++. +|++++.||..|.++|+.|..+.++|.++|..... . .. + .+++
T Consensus 161 ~--G~~~ti~t-aCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~- 236 (418)
T PRK07910 161 K--AGVITPVS-ACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRD- 236 (418)
T ss_pred C--CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCC-
Confidence 7 34567775 99999999999999999999999999999974210 0 10 0 1122
Q ss_pred cccccccccceeeEEEeccC
Q 009966 289 LLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 289 lv~~~lFgDGAaAvLLs~~~ 308 (521)
..++|+|++++||++..
T Consensus 237 ---G~v~gEGaa~vvLe~~~ 253 (418)
T PRK07910 237 ---GFVFGEGGALMVIETEE 253 (418)
T ss_pred ---CEeeeceEEEEEEeeHH
Confidence 46899999999999754
No 91
>PRK06158 thiolase; Provisional
Probab=98.65 E-value=7.6e-08 Score=102.21 Aligned_cols=82 Identities=20% Similarity=0.117 Sum_probs=70.7
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeE
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYA 268 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~a 268 (521)
.+|++++|+++|++++|||.+|+++. +...|+ ..+++++|++ ...++++. .||+++..++..|..++++|..++|
T Consensus 33 ~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG~~d~v 107 (384)
T PRK06158 33 AQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAGLCDVA 107 (384)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcCCCCEE
Confidence 99999999999999999999998753 333443 5799999998 57888998 4999999999999999999999999
Q ss_pred EEE-Eecc
Q 009966 269 LVV-STEN 275 (521)
Q Consensus 269 LVV-s~E~ 275 (521)
||+ +.|.
T Consensus 108 LV~~g~~~ 115 (384)
T PRK06158 108 LICYGSNQ 115 (384)
T ss_pred EEeecccc
Confidence 998 4443
No 92
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.64 E-value=1.3e-07 Score=101.10 Aligned_cols=90 Identities=13% Similarity=0.176 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHc-CCCCCCcCEEEEecc-CC-CCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 187 VIVGAIDELLAKT-GVKPRDIGILLVNSS-LF-NPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 187 l~~~Aa~~aL~~a-gi~p~dID~LI~~ss-~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
|+.+|++++|+++ |++|+|||.+|+++. ++ ...+..+..++..+|++ ++.++.++. +|+++..++..|..++++|
T Consensus 30 L~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~~-~caSG~~av~~Aa~~I~sG 107 (406)
T PRK07851 30 LAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVNR-YCSSSLQTTRMAFHAIKAG 107 (406)
T ss_pred HHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeeec-cchhHHHHHHHHHHHHHCC
Confidence 3499999999996 999999999998753 22 22456778899999996 689999995 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 009966 264 PDSYALVVSTENITM 278 (521)
Q Consensus 264 ~~~~aLVVs~E~~s~ 278 (521)
..+.+||++.|.+|.
T Consensus 108 ~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 108 EGDVFISAGVETVSR 122 (406)
T ss_pred CCCEEEEeeEEeccc
Confidence 999999999998765
No 93
>PLN02287 3-ketoacyl-CoA thiolase
Probab=98.64 E-value=1.3e-07 Score=102.36 Aligned_cols=89 Identities=15% Similarity=0.225 Sum_probs=76.9
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCc-HHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPS-LSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
.+|++++|+++|++++|||.+|+++. .....+. .+.++...+|++..+.+++++ .+|++++.|+..|...+++|..+
T Consensus 76 ~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I~sG~~d 154 (452)
T PLN02287 76 APVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIKAGFYD 154 (452)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999998865 4444444 344566777998668999999 49999999999999999999999
Q ss_pred eEEEEEeccCCC
Q 009966 267 YALVVSTENITM 278 (521)
Q Consensus 267 ~aLVVs~E~~s~ 278 (521)
.+||++.|.+|.
T Consensus 155 vvLv~GvE~mS~ 166 (452)
T PLN02287 155 IGIGAGVESMTT 166 (452)
T ss_pred eEEEEeEEecCC
Confidence 999999999874
No 94
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.64 E-value=9.4e-08 Score=101.63 Aligned_cols=91 Identities=20% Similarity=0.205 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccC-CC--CCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhc
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSL-FN--PTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~-~~--~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
+|+.+|++++|+++|++++|||.+|++++. .. ..+..+..+...+|++ .+.+++++ ++|++++.||..|..++++
T Consensus 24 eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I~s 101 (389)
T PRK07516 24 SLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAIEA 101 (389)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHHHC
Confidence 344999999999999999999999987542 21 1111122334456776 78899999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009966 263 TPDSYALVVSTENITM 278 (521)
Q Consensus 263 ~~~~~aLVVs~E~~s~ 278 (521)
|..+++||++.|.+|.
T Consensus 102 G~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 102 GRARIVLVVGAEKMTA 117 (389)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999998763
No 95
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.64 E-value=1.1e-07 Score=101.49 Aligned_cols=86 Identities=23% Similarity=0.201 Sum_probs=69.2
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEecc-CCCCC-----CcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhc
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSS-LFNPT-----PSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~-----Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
.+|++++|+++|++|+|||.+|++++ +++.. |+....++ .++. +++++++++ +|++++.||..|..++++
T Consensus 31 ~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~~-~Casg~~al~~Aa~~I~s 106 (403)
T PRK06289 31 REVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHEA-ACASGSVATLAAMADLRA 106 (403)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeeccc-ccHHHHHHHHHHHHHHHc
Confidence 99999999999999999999998754 43322 23233222 2443 467999995 999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009966 263 TPDSYALVVSTENITM 278 (521)
Q Consensus 263 ~~~~~aLVVs~E~~s~ 278 (521)
|..++|||+++|..|.
T Consensus 107 G~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 107 GRYDVALVVGVELMKT 122 (403)
T ss_pred CCCCEEEEEEEEecCC
Confidence 9999999999998663
No 96
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.63 E-value=1.1e-07 Score=102.28 Aligned_cols=92 Identities=12% Similarity=0.203 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCCC-CCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLFN-PTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~-~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
+|+..|++++|+++|++|++||.+|+++.... ..+.++.++...+|++..++++.++ .+|++++.|+..|...+++|.
T Consensus 31 eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~sG~ 109 (428)
T PRK08963 31 DLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMAGT 109 (428)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHCCC
Confidence 34499999999999999999999999975322 2355677788999998669999999 599999999999999999999
Q ss_pred CCeEEEEEeccCCC
Q 009966 265 DSYALVVSTENITM 278 (521)
Q Consensus 265 ~~~aLVVs~E~~s~ 278 (521)
.+.+||++.|.+|.
T Consensus 110 ~dvvLvgG~Esms~ 123 (428)
T PRK08963 110 IDIGIAGGADSSSV 123 (428)
T ss_pred CCEEEEecccccCC
Confidence 99999999999885
No 97
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.63 E-value=1.6e-07 Score=100.20 Aligned_cols=93 Identities=11% Similarity=0.144 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHc-CCCCCCcCEEEEeccC--CCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHh
Q 009966 185 KAVIVGAIDELLAKT-GVKPRDIGILLVNSSL--FNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQ 261 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~a-gi~p~dID~LI~~ss~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~ 261 (521)
++|+..|++++|++. |++|++||.+|+++.. ....+..+..+....|++.+++++.++ +.|++++.|+.+|.+.++
T Consensus 27 ~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~I~ 105 (400)
T PRK13359 27 DDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARAIK 105 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHHHH
Confidence 344499999999974 9999999999998753 222377888999999999789999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009966 262 VTPDSYALVVSTENITM 278 (521)
Q Consensus 262 s~~~~~aLVVs~E~~s~ 278 (521)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~divlagGvEsmS~ 122 (400)
T PRK13359 106 SGEAALMIAGGVESMSR 122 (400)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999986
No 98
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.62 E-value=1.3e-07 Score=93.86 Aligned_cols=123 Identities=22% Similarity=0.339 Sum_probs=82.9
Q ss_pred HHhHHHHHHHHHHHHHHcCCCCCC------cCEEEEeccCCC-----------------C------CC-cHHHHHHHHcC
Q 009966 182 KETKAVIVGAIDELLAKTGVKPRD------IGILLVNSSLFN-----------------P------TP-SLSAMVVNHYK 231 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~agi~p~d------ID~LI~~ss~~~-----------------~------~P-s~a~~I~~~LG 231 (521)
.....++..|+.++|+++|+++++ +++++-++..++ + .| ..+..|+..+|
T Consensus 85 ~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 164 (254)
T PF00109_consen 85 DRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFG 164 (254)
T ss_dssp -HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHT
T ss_pred hhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcC
Confidence 456788999999999999999853 444443322210 1 23 25788999999
Q ss_pred CCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEec-cCCCC---------CCCCCCcccc----cccccccc
Q 009966 232 LRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTE-NITMN---------WYGGNDRSML----LTNCLFRL 297 (521)
Q Consensus 232 l~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E-~~s~~---------~~~~~dr~~l----v~~~lFgD 297 (521)
++ -.++.+++ +|++++.||..|.++|++|..+.+||.++| .++.. ....+++... =...++|+
T Consensus 165 l~--G~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~gE 241 (254)
T PF00109_consen 165 LR--GPSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLGE 241 (254)
T ss_dssp B---SSEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB-
T ss_pred CC--Cccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEEEC
Confidence 97 45667775 999999999999999999999999999999 44431 1111111000 02478999
Q ss_pred ceeeEEEecc
Q 009966 298 GGAAILLSNR 307 (521)
Q Consensus 298 GAaAvLLs~~ 307 (521)
||+++||++.
T Consensus 242 Ga~~~vLe~~ 251 (254)
T PF00109_consen 242 GAGALVLERL 251 (254)
T ss_dssp EEEEEEEEEH
T ss_pred ceEEEEEEEh
Confidence 9999999863
No 99
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.58 E-value=1.6e-07 Score=99.93 Aligned_cols=93 Identities=14% Similarity=0.285 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEeccC-CCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 185 KAVIVGAIDELLAKTGVKPRDIGILLVNSSL-FNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
++|+..|++++|+++|++|+|||.+|+++.. ....+..+.+++..+|++.+++++.++. +|++|+.|+..|..++++|
T Consensus 28 ~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~-~CaSG~~Ai~~A~~~I~sG 106 (392)
T PRK06633 28 PMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINK-VCGSGLKSVALAANSIMTG 106 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhcc-hhHHHHHHHHHHHHHHHcC
Confidence 3344999999999999999999999998653 2234567777889999986799999995 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 009966 264 PDSYALVVSTENITM 278 (521)
Q Consensus 264 ~~~~aLVVs~E~~s~ 278 (521)
..+.+||++.|.+|.
T Consensus 107 ~~dvvla~G~E~ms~ 121 (392)
T PRK06633 107 DNEIVIAGGQENMSL 121 (392)
T ss_pred CCCEEEEcccccCCC
Confidence 999999999999885
No 100
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.57 E-value=2.6e-07 Score=98.18 Aligned_cols=92 Identities=11% Similarity=0.187 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccC-CCC-CCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSL-FNP-TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
+|+..|++++|+++|++|+|||.+++++.. ... .+..+..+....|++.+++++.++ .+|++++.|+..|.+.+++|
T Consensus 28 eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~sG 106 (387)
T PRK07850 28 ELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIAAG 106 (387)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHHCC
Confidence 344999999999999999999999998753 222 234556777789998679999999 49999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 009966 264 PDSYALVVSTENITM 278 (521)
Q Consensus 264 ~~~~aLVVs~E~~s~ 278 (521)
..+.+|+++.|.+|.
T Consensus 107 ~~dvvla~G~E~mS~ 121 (387)
T PRK07850 107 AIDVGIACGVEAMSR 121 (387)
T ss_pred CCCEEEEEeEecCCC
Confidence 999999999999985
No 101
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.56 E-value=2.5e-07 Score=98.73 Aligned_cols=92 Identities=12% Similarity=0.167 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHH-cCCCCCCcCEEEEeccCC--CCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhc
Q 009966 186 AVIVGAIDELLAK-TGVKPRDIGILLVNSSLF--NPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 186 ~l~~~Aa~~aL~~-agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
+|+..|++++|++ +|++|++||.+|+++... .-.+..+..+....|++.+++++.++ ++|++|..|+..|.+.+++
T Consensus 28 ~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I~s 106 (401)
T PRK09050 28 DLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAIKA 106 (401)
T ss_pred HHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHHHC
Confidence 3449999999996 699999999999986532 22356777799999998779999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009966 263 TPDSYALVVSTENITM 278 (521)
Q Consensus 263 ~~~~~aLVVs~E~~s~ 278 (521)
|..+.+||++.|.+|.
T Consensus 107 G~~dvvlagGvEsmS~ 122 (401)
T PRK09050 107 GEAELMIAGGVESMSR 122 (401)
T ss_pred CCCCEEEEeccccccc
Confidence 9999999999999985
No 102
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.56 E-value=3.3e-07 Score=97.87 Aligned_cols=93 Identities=16% Similarity=0.200 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEecc-CC-CCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhc
Q 009966 185 KAVIVGAIDELLAKTGVKPRDIGILLVNSS-LF-NPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
++|+..|++++|+++|++|+|||.+|+++. +. ...+..+..+....|++..++++.++. +|++|+.|+..|...+++
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~-~CaSG~~Ai~~A~~~I~s 105 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNR-LCASGLAAVIDAARAITC 105 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeeec-hhhhHHHHHHHHHHHHHC
Confidence 344499999999999999999999999865 22 223566777889999987799999994 999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009966 263 TPDSYALVVSTENITM 278 (521)
Q Consensus 263 ~~~~~aLVVs~E~~s~ 278 (521)
|..+.+||++.|.+|.
T Consensus 106 G~~dvvlagG~Esms~ 121 (401)
T PRK08131 106 GEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCEEEEEEecCCCC
Confidence 9999999999999885
No 103
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.54 E-value=3.6e-07 Score=97.16 Aligned_cols=92 Identities=13% Similarity=0.254 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccC-CCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSL-FNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
+|+.+|++++|+++|++|+|||.+|+++.. ....+..+..++..+|++.++.++.++ .+|++++.++..|...+++|.
T Consensus 28 ~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~sG~ 106 (388)
T PRK06366 28 QLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIMLGE 106 (388)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhcCC
Confidence 344999999999999999999999987642 112344567789999998568899999 599999999999999999999
Q ss_pred CCeEEEEEeccCCC
Q 009966 265 DSYALVVSTENITM 278 (521)
Q Consensus 265 ~~~aLVVs~E~~s~ 278 (521)
.+.+||++.|.+|.
T Consensus 107 ~d~vla~G~e~ms~ 120 (388)
T PRK06366 107 RDLVIAGGMENMSN 120 (388)
T ss_pred CCEEEEEeeEcccc
Confidence 99999988898773
No 104
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.54 E-value=3.7e-06 Score=90.87 Aligned_cols=118 Identities=17% Similarity=0.106 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCC-----CcCEEEEeccCCC------------------C--------CC-cHHHHHHHHcC
Q 009966 184 TKAVIVGAIDELLAKTGVKPR-----DIGILLVNSSLFN------------------P--------TP-SLSAMVVNHYK 231 (521)
Q Consensus 184 a~~l~~~Aa~~aL~~agi~p~-----dID~LI~~ss~~~------------------~--------~P-s~a~~I~~~LG 231 (521)
...++..|+.++|+++|+++. +...++++++... . .+ ..+..|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 456789999999999998542 3455666643110 0 11 24667889999
Q ss_pred CCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----------------------CCCCC--Ccc
Q 009966 232 LRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN----------------------WYGGN--DRS 287 (521)
Q Consensus 232 l~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~----------------------~~~~~--dr~ 287 (521)
++ -.++.+++ +|++++.||..|.++|++|..+.+||.++|..... ...+- +++
T Consensus 173 l~--Gp~~tv~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~~ 249 (437)
T PLN02836 173 FQ--GPNHAAVT-ACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDRD 249 (437)
T ss_pred CC--CceeceeC-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCCC
Confidence 87 66778885 99999999999999999999999999988863210 00011 122
Q ss_pred ccccccccccceeeEEEeccC
Q 009966 288 MLLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 288 ~lv~~~lFgDGAaAvLLs~~~ 308 (521)
.++.||||+|+||++.+
T Consensus 250 ----G~~~gEGaaalVLe~~~ 266 (437)
T PLN02836 250 ----GFVIGEGAGVLVLEELE 266 (437)
T ss_pred ----CeeeecCEEEEEEeeHH
Confidence 46789999999999754
No 105
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.53 E-value=3.8e-07 Score=97.36 Aligned_cols=92 Identities=15% Similarity=0.168 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHH-cCCCCCCcCEEEEeccC--CCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhc
Q 009966 186 AVIVGAIDELLAK-TGVKPRDIGILLVNSSL--FNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 186 ~l~~~Aa~~aL~~-agi~p~dID~LI~~ss~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
+|+..|++++|++ +|++|+|||.+|+++.. ....+..+..+...+|++.+++++.++ .+|++|+.|+..|...+++
T Consensus 27 ~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I~s 105 (400)
T TIGR02430 27 DLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAIKA 105 (400)
T ss_pred HHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHHHC
Confidence 3449999999996 69999999999998643 222366777899999998779999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009966 263 TPDSYALVVSTENITM 278 (521)
Q Consensus 263 ~~~~~aLVVs~E~~s~ 278 (521)
|..+.+|+++.|.+|.
T Consensus 106 G~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 106 GEADLLIAGGVESMSR 121 (400)
T ss_pred CCCCEEEEeccccccC
Confidence 9999999999999985
No 106
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=98.51 E-value=5.7e-07 Score=95.86 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCC-CCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLF-NPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
+|+.+|++++|+++|++++|||.+|+++... ...+..+..+...+|++.++.++.++. +|+++..++..|.+.+++|.
T Consensus 27 ~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~~-~caSg~~av~~Aa~~I~sG~ 105 (394)
T PLN02644 27 ELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVNK-VCASGMKAVMLAAQSIQLGI 105 (394)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEec-cchHHHHHHHHHHHHHHcCC
Confidence 3449999999999999999999999875421 223345566889999976688999995 99999999999999999999
Q ss_pred CCeEEEEEeccCCC
Q 009966 265 DSYALVVSTENITM 278 (521)
Q Consensus 265 ~~~aLVVs~E~~s~ 278 (521)
.+.+||++.|.+|.
T Consensus 106 ~d~vlv~G~E~~s~ 119 (394)
T PLN02644 106 NDVVVAGGMESMSN 119 (394)
T ss_pred CCEEEEEeEEecCC
Confidence 99999999998874
No 107
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.50 E-value=3.8e-07 Score=98.22 Aligned_cols=91 Identities=13% Similarity=0.211 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEeccC-CCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSSL-FNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
|+..|++++|+++|++|++||.+|+++.. ....+.++..+.-..|++..++++.++ ++|++++.|+.+|...+++|..
T Consensus 34 L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~sG~~ 112 (430)
T TIGR02446 34 LGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMAGAI 112 (430)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHCCCC
Confidence 33999999999999999999999998653 222345666666668998779999999 5999999999999999999999
Q ss_pred CeEEEEEeccCCC
Q 009966 266 SYALVVSTENITM 278 (521)
Q Consensus 266 ~~aLVVs~E~~s~ 278 (521)
+.+|+++.|.+|.
T Consensus 113 dvvla~G~E~mS~ 125 (430)
T TIGR02446 113 DIGIAGGADSSSV 125 (430)
T ss_pred CEEEEeeeEcccC
Confidence 9999999999985
No 108
>PRK08256 lipid-transfer protein; Provisional
Probab=98.49 E-value=4.4e-07 Score=96.55 Aligned_cols=86 Identities=19% Similarity=0.225 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEeccC-CCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSSL-FNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
|+..|++++|+++|++++|||.+++++.. +... ...+...+|++ .+.+++++. +|++++.+|..|.++|++|..
T Consensus 25 La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~~-~caSg~~ai~~A~~~I~sG~~ 99 (391)
T PRK08256 25 MAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVNN-NCSTGSTALFLARQAVRSGAA 99 (391)
T ss_pred HHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCccccc-ccHHHHHHHHHHHHHHHCCCC
Confidence 33999999999999999999999887542 2211 23467789997 578899994 999999999999999999999
Q ss_pred CeEEEEEeccCC
Q 009966 266 SYALVVSTENIT 277 (521)
Q Consensus 266 ~~aLVVs~E~~s 277 (521)
+++||+++|.+|
T Consensus 100 d~vLv~g~e~~s 111 (391)
T PRK08256 100 DCALALGFEQMQ 111 (391)
T ss_pred CEEEEEEEeecc
Confidence 999999999876
No 109
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.48 E-value=6.7e-07 Score=95.44 Aligned_cols=91 Identities=20% Similarity=0.203 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCC-CCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLF-NPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
+|+.+|++++|+++|++++|||.+++++... +........+...+|++ .+.++.+. ++|++++.+|..|...+++|.
T Consensus 29 ~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~sG~ 106 (398)
T PRK06157 29 DLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVASGA 106 (398)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHCCC
Confidence 3449999999999999999999999876422 21122235688899998 58899999 599999999999999999999
Q ss_pred CCeEEEEEeccCCC
Q 009966 265 DSYALVVSTENITM 278 (521)
Q Consensus 265 ~~~aLVVs~E~~s~ 278 (521)
.+.+||++.|.+|.
T Consensus 107 ~d~vlv~G~e~~s~ 120 (398)
T PRK06157 107 YDIALALGVEKLKD 120 (398)
T ss_pred CCEEEEEEEeeccc
Confidence 99999999998764
No 110
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.46 E-value=8.2e-07 Score=94.50 Aligned_cols=92 Identities=13% Similarity=0.228 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccC-CCC-CCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSL-FNP-TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
+|+..|++++|+++|++|+|||.+|+++.. ... .+..+..+.-.-|++.+++++.++. +|++|+.|+..|.+.+++|
T Consensus 28 ~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~~-~CaSG~~Ai~~A~~~I~sG 106 (390)
T PRK06504 28 DLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSIDR-QCGSSQQALHFAAQAVMSG 106 (390)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEec-hhhHHHHHHHHHHHHHHCC
Confidence 344999999999999999999999998653 211 2445544444458866899999994 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 009966 264 PDSYALVVSTENITM 278 (521)
Q Consensus 264 ~~~~aLVVs~E~~s~ 278 (521)
..+.+||++.|.+|.
T Consensus 107 ~~dvvLagGvEsmS~ 121 (390)
T PRK06504 107 TMDIVIAAGVESMTR 121 (390)
T ss_pred CCCEEEEeeeeecCC
Confidence 999999999999985
No 111
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.45 E-value=6.9e-07 Score=95.00 Aligned_cols=93 Identities=11% Similarity=0.133 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHH-cCCCCCCcCEEEEeccCC-CC-CCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHh
Q 009966 185 KAVIVGAIDELLAK-TGVKPRDIGILLVNSSLF-NP-TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQ 261 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~-agi~p~dID~LI~~ss~~-~~-~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~ 261 (521)
++|...+++++|++ +|++|+|||.+|+++... .. .+..+..+....|++..+.++.++. +|++++.|+.+|..+++
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~~-~caSG~~Ai~~A~~~I~ 106 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVNR-LCGSSMQALHDAARAIM 106 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeeec-hhHHHHHHHHHHHHHHH
Confidence 34449999999997 699999999999987542 22 2455667888899986799999994 99999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 009966 262 VTPDSYALVVSTENITM 278 (521)
Q Consensus 262 s~~~~~aLVVs~E~~s~ 278 (521)
+|..+.+||++.|.+|.
T Consensus 107 sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 107 TGDGDVFLIGGVEHMGH 123 (387)
T ss_pred CCCCCEEEEcccccccc
Confidence 99999999999999875
No 112
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.43 E-value=1.2e-06 Score=94.69 Aligned_cols=91 Identities=23% Similarity=0.314 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHcCCCCCC--cCEEEEeccC---CCCCCcHHHHHHHHcCCC------CCeeEEEecCccchHHHHHHHH
Q 009966 187 VIVGAIDELLAKTGVKPRD--IGILLVNSSL---FNPTPSLSAMVVNHYKLR------GNILSYNLGGMGCSAGLISIDL 255 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~d--ID~LI~~ss~---~~~~Ps~a~~I~~~LGl~------~~~~~~dl~gmgCsg~l~AL~l 255 (521)
|+.+|++++|+++|++|+| ||.+|+++.. +...+..+..+...+|++ ..++++.++. +|++++.|+..
T Consensus 51 L~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~-~caSG~~Ai~~ 129 (438)
T PTZ00455 51 LLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEG-ACASGGLAVQS 129 (438)
T ss_pred HHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEEC-cCHHHHHHHHH
Confidence 3399999999999999999 9999987642 112355666777565554 3688999995 99999999999
Q ss_pred HHHHHhcCCCCeEEEEEeccCCC
Q 009966 256 ARRLLQVTPDSYALVVSTENITM 278 (521)
Q Consensus 256 A~~lL~s~~~~~aLVVs~E~~s~ 278 (521)
|...+++|..+.+||++.|.+|.
T Consensus 130 A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 130 AWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHCCCCCEEEEEEEeeccc
Confidence 99999999999999999999875
No 113
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.43 E-value=4e-06 Score=87.74 Aligned_cols=116 Identities=13% Similarity=0.078 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHcCC--CCCCcCEEEEeccCC-----------------CCCC---------cHHHHHHHHcCCCCCee
Q 009966 186 AVIVGAIDELLAKTGV--KPRDIGILLVNSSLF-----------------NPTP---------SLSAMVVNHYKLRGNIL 237 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi--~p~dID~LI~~ss~~-----------------~~~P---------s~a~~I~~~LGl~~~~~ 237 (521)
+++..|++++++++|+ +++++++++-++... ...| ..+..|...+|++ -+
T Consensus 6 ~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~--Gp 83 (342)
T PRK14691 6 RYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK--GP 83 (342)
T ss_pred HHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC--CC
Confidence 4458999999999995 677887776443111 0011 3567788899997 56
Q ss_pred EEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC----------C------------CC--CCcccccccc
Q 009966 238 SYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNW----------Y------------GG--NDRSMLLTNC 293 (521)
Q Consensus 238 ~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~----------~------------~~--~dr~~lv~~~ 293 (521)
++.++. +|++++.||..|.++|+.|..+.+||.++|.....+ . .+ .+|+ ..
T Consensus 84 ~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~----G~ 158 (342)
T PRK14691 84 IGAPVT-ACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD----GF 158 (342)
T ss_pred cccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC----Cc
Confidence 677885 999999999999999999999999999998732100 0 01 1223 36
Q ss_pred ccccceeeEEEeccC
Q 009966 294 LFRLGGAAILLSNRS 308 (521)
Q Consensus 294 lFgDGAaAvLLs~~~ 308 (521)
++||||+++||++.+
T Consensus 159 v~gEGAa~lvLes~~ 173 (342)
T PRK14691 159 VMGEGAGLLIIEELE 173 (342)
T ss_pred cccceEEEEEEeeHH
Confidence 889999999999754
No 114
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.41 E-value=1.1e-06 Score=94.83 Aligned_cols=90 Identities=17% Similarity=0.107 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCC-CCCCcHH-HHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLF-NPTPSLS-AMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a-~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
+|+.+|++++|+++|++++|||.+++++... ...+..+ ..++..+|++ .++++.+.+ +|+++..||..|...|++|
T Consensus 39 eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~~-~~aSg~~ai~~A~~~I~sG 116 (430)
T PRK06365 39 ERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIEG-GGATGGLAFQAGYEEIASG 116 (430)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEeC-CcHHHHHHHHHHHHHHHcC
Confidence 4449999999999999999999988775432 2222333 3457999998 489999994 9999999999999999999
Q ss_pred CCCeEEEEEeccCC
Q 009966 264 PDSYALVVSTENIT 277 (521)
Q Consensus 264 ~~~~aLVVs~E~~s 277 (521)
..+.|||+++|..|
T Consensus 117 ~~~~vLv~G~e~~s 130 (430)
T PRK06365 117 RMDCVAVYGFETMS 130 (430)
T ss_pred CCCEEEEEEeeecc
Confidence 99999999999765
No 115
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.38 E-value=2.6e-05 Score=83.30 Aligned_cols=119 Identities=20% Similarity=0.145 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHHHHcCCCC-----CCcCEEEEeccCC--C---------------------------CCC---------
Q 009966 184 TKAVIVGAIDELLAKTGVKP-----RDIGILLVNSSLF--N---------------------------PTP--------- 220 (521)
Q Consensus 184 a~~l~~~Aa~~aL~~agi~p-----~dID~LI~~ss~~--~---------------------------~~P--------- 220 (521)
...++..|++++|+++|+++ +++++++-++... . ..|
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 45677899999999999854 3455555443211 0 012
Q ss_pred cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccC-CC---------CCCC-----C-C
Q 009966 221 SLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENI-TM---------NWYG-----G-N 284 (521)
Q Consensus 221 s~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~-s~---------~~~~-----~-~ 284 (521)
..+..|...+|++ -.++.+++ +|++++.||..|.++|+.+..+.+||.++|.. +. .+.. + .
T Consensus 153 ~~a~~is~~~gl~--Gp~~ti~~-acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~ 229 (398)
T PRK06519 153 LLAGNISIVHKVT--GSSRTFMG-EESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVW 229 (398)
T ss_pred HHHHHHHHHhCCC--CccccccC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCchh
Confidence 2467788899997 56778885 99999999999999999999999999999862 21 0111 0 1
Q ss_pred -----CccccccccccccceeeEEEeccCC
Q 009966 285 -----DRSMLLTNCLFRLGGAAILLSNRSS 309 (521)
Q Consensus 285 -----dr~~lv~~~lFgDGAaAvLLs~~~~ 309 (521)
+|+ ..+.|+||+++||++.+.
T Consensus 230 d~~~~~r~----G~v~GEGAa~lvLE~~~~ 255 (398)
T PRK06519 230 SRGGEDGG----GFILGSGGAFLVLESREH 255 (398)
T ss_pred ccCccCCC----CeeeeceEEEEEEeeHHH
Confidence 233 367899999999998553
No 116
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.35 E-value=1.2e-06 Score=93.02 Aligned_cols=92 Identities=12% Similarity=0.121 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHH-cCCCCCCcCEEEEeccCC-CC-CCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhc
Q 009966 186 AVIVGAIDELLAK-TGVKPRDIGILLVNSSLF-NP-TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 186 ~l~~~Aa~~aL~~-agi~p~dID~LI~~ss~~-~~-~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
+|+..|++++|++ +|++|++||.+++++... .. .+..+..+....|++..+.++.++ .+|++++.|+..|.+.+++
T Consensus 27 ~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I~s 105 (385)
T TIGR02445 27 DLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAIMT 105 (385)
T ss_pred HHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHHHC
Confidence 4449999999997 599999999999986532 21 344666666678998779999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 009966 263 TPDSYALVVSTENITM 278 (521)
Q Consensus 263 ~~~~~aLVVs~E~~s~ 278 (521)
|..+.+|+++.|.+|.
T Consensus 106 G~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 106 GDADVCLVGGVEHMGH 121 (385)
T ss_pred CCCCEEEEeeehhccc
Confidence 9999999999999875
No 117
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.31 E-value=3.1e-06 Score=91.19 Aligned_cols=91 Identities=16% Similarity=0.245 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEeccCC-CCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSSLF-NPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
|+..|++++|+++|++++|||.+|+++... ...+..+..+.-..|++..+.++.++ ++|++++.++..|..++++|..
T Consensus 34 L~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~sG~~ 112 (427)
T PRK09268 34 MLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIALGQI 112 (427)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHCCCC
Confidence 349999999999999999999999986532 11244556655556676568999999 5999999999999999999999
Q ss_pred CeEEEEEeccCCC
Q 009966 266 SYALVVSTENITM 278 (521)
Q Consensus 266 ~~aLVVs~E~~s~ 278 (521)
+.+||++.|.+|.
T Consensus 113 d~vlvgG~E~ms~ 125 (427)
T PRK09268 113 DSGIAGGVDTTSD 125 (427)
T ss_pred CEEEEeeEEccCC
Confidence 9999999999885
No 118
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.30 E-value=2.6e-06 Score=90.43 Aligned_cols=91 Identities=11% Similarity=0.211 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEeccC-CCC-CCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSSL-FNP-TPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
|+.+|++++|+++|++|+|||.+|+++.. ... .+..+..+.-..|++..+.++.++ .+|++++.++..|.+.|++|.
T Consensus 29 L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~sG~ 107 (382)
T PRK07801 29 LGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVMSGT 107 (382)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHHCCC
Confidence 44999999999999999999999987542 111 233344333457776568888999 499999999999999999999
Q ss_pred CCeEEEEEeccCCC
Q 009966 265 DSYALVVSTENITM 278 (521)
Q Consensus 265 ~~~aLVVs~E~~s~ 278 (521)
.+.+||++.|.+|.
T Consensus 108 ~d~vLv~G~e~ms~ 121 (382)
T PRK07801 108 QDLVVAGGVQNMSQ 121 (382)
T ss_pred CCEEEEcchhhhcC
Confidence 99999999997754
No 119
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.29 E-value=5.7e-05 Score=96.03 Aligned_cols=120 Identities=16% Similarity=0.171 Sum_probs=85.6
Q ss_pred HHhHHHHHHHHHHHHHHcCCC----CCCcCEEEEeccCCC----------------------------------------
Q 009966 182 KETKAVIVGAIDELLAKTGVK----PRDIGILLVNSSLFN---------------------------------------- 217 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~agi~----p~dID~LI~~ss~~~---------------------------------------- 217 (521)
.....++..++.++|+++|+. .+.+++++-++...+
T Consensus 91 Dpqqrl~L~~a~eALedAG~~~~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (2582)
T TIGR02813 91 DISQLLSLVVAKEVLNDAGLPDGYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYI 170 (2582)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhccccc
Confidence 445678899999999999984 345655553322100
Q ss_pred -----CCC-----cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCC-C-------
Q 009966 218 -----PTP-----SLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM-N------- 279 (521)
Q Consensus 218 -----~~P-----s~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~-~------- 279 (521)
..| ..+.+|.++||++ -.++.++. +|++++.||++|.+.|++|..+.+||-+.+.... .
T Consensus 171 ~~~~~~~~g~~~n~~A~RIS~~f~L~--Gps~tVdt-ACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~ 247 (2582)
T TIGR02813 171 HWEENSFPGSLGNVISGRIANRFDLG--GMNCVVDA-ACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSK 247 (2582)
T ss_pred ccCccccccccccHHHHHHHHHhCCC--CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHh
Confidence 011 2478899999997 56778884 9999999999999999999999999988776321 0
Q ss_pred --CCC------C--CCccccccccccccceeeEEEeccC
Q 009966 280 --WYG------G--NDRSMLLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 280 --~~~------~--~dr~~lv~~~lFgDGAaAvLLs~~~ 308 (521)
.+. + .+++ .++.|+|+++++|.+-.
T Consensus 248 ~~~lS~~g~crpFD~~ad----G~v~GEGag~vvLkrL~ 282 (2582)
T TIGR02813 248 TPAFTTNEDIQPFDIDSK----GMMIGEGIGMMALKRLE 282 (2582)
T ss_pred ccCcCCCCCccCCCCCCC----cccccceEEEEEeCcHH
Confidence 011 1 1122 46889999999998744
No 120
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.14 E-value=8.8e-05 Score=75.06 Aligned_cols=117 Identities=23% Similarity=0.267 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 185 KAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
..|+.+|++.+|+|++++++|||.++-.--....++ ++..++.|+++ -+.|.| +||...-+|.+|.-++..+-
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~iP----f~Glyg-ACST~~e~l~laa~~vdgg~ 124 (329)
T PF07451_consen 52 SKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGIP----FLGLYG-ACSTMMESLALAAMLVDGGF 124 (329)
T ss_dssp HHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCCC----ccchhh-HHHHHHHHHHHHHHHHhCCC
Confidence 346689999999999999999999987644333333 47778888754 889998 99999999999999999999
Q ss_pred CCeEEEEEeccCC---CCCCCC----CCccccccccccccceeeEEEeccCCC
Q 009966 265 DSYALVVSTENIT---MNWYGG----NDRSMLLTNCLFRLGGAAILLSNRSSD 310 (521)
Q Consensus 265 ~~~aLVVs~E~~s---~~~~~~----~dr~~lv~~~lFgDGAaAvLLs~~~~~ 310 (521)
.+++|+.++--.. +.|..+ ..|.. +...---||+|+||++.+..
T Consensus 125 a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~~ 175 (329)
T PF07451_consen 125 ADYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGSG 175 (329)
T ss_dssp -SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--S
T ss_pred cceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCCC
Confidence 9999988765443 123322 33321 22344579999999987653
No 121
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.06 E-value=1.5e-05 Score=84.78 Aligned_cols=85 Identities=16% Similarity=0.080 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
|+.+|++++|+++|++++|||.++.++.. .+.....++..+|++ .....++. .||+++..++..|...+++|..+
T Consensus 28 L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG~~d 102 (388)
T PRK08142 28 LHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAGKCS 102 (388)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcCCCC
Confidence 44999999999999999999997753211 111124588999997 57888888 49999999999999999999999
Q ss_pred eEEEEEeccC
Q 009966 267 YALVVSTENI 276 (521)
Q Consensus 267 ~aLVVs~E~~ 276 (521)
.||||+.|..
T Consensus 103 ~vLvvg~e~~ 112 (388)
T PRK08142 103 VALITLAGRP 112 (388)
T ss_pred EEEEEeeeec
Confidence 9999999864
No 122
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=97.98 E-value=3.6e-05 Score=84.54 Aligned_cols=90 Identities=13% Similarity=0.072 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHcCCC--CCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 186 AVIVGAIDELLAKTGVK--PRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~--p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
+|+.+|++++|+++|++ ++|||.++++.............++.++|+.+ ....... .||+++..++..|...+++|
T Consensus 29 ~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~IasG 106 (498)
T PRK08257 29 DLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIAAG 106 (498)
T ss_pred HHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHHCC
Confidence 45599999999999999 99999998764321122234578999999974 4444555 58889999999999999999
Q ss_pred CCCeEEEEEeccCC
Q 009966 264 PDSYALVVSTENIT 277 (521)
Q Consensus 264 ~~~~aLVVs~E~~s 277 (521)
..+.|||+++|..+
T Consensus 107 ~advVLv~G~E~~~ 120 (498)
T PRK08257 107 EADVALVAGAEAQS 120 (498)
T ss_pred CCCEEEEeeeeecc
Confidence 99999999999864
No 123
>PRK07855 lipid-transfer protein; Provisional
Probab=97.89 E-value=5.1e-05 Score=80.81 Aligned_cols=81 Identities=14% Similarity=0.118 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSY 267 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~ 267 (521)
+.+|++++|+++|++++|||.+++++.. ..+. ..+++.+|+++-....++.+ ||+++..++..|...+++|..+.
T Consensus 28 ~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~~-gg~sg~~~~~~A~~~I~sG~~d~ 102 (386)
T PRK07855 28 ACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIHY-GGGAACATVQQAAMAVATGVADV 102 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeecC-CcHHHHHHHHHHHHHHHCCCCCE
Confidence 3999999999999999999999874321 1222 45889999974245568884 99999999999999999999999
Q ss_pred EEEEEe
Q 009966 268 ALVVST 273 (521)
Q Consensus 268 aLVVs~ 273 (521)
|||+++
T Consensus 103 vLv~g~ 108 (386)
T PRK07855 103 VVCYRA 108 (386)
T ss_pred EEEEee
Confidence 999987
No 124
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.80 E-value=0.00088 Score=71.76 Aligned_cols=122 Identities=20% Similarity=0.252 Sum_probs=87.0
Q ss_pred HHHhHHHHHHHHHHHHHHcCCC-CCCcC--EEE-EeccC---CC------------C------------CC-cHHHHHHH
Q 009966 181 MKETKAVIVGAIDELLAKTGVK-PRDIG--ILL-VNSSL---FN------------P------------TP-SLSAMVVN 228 (521)
Q Consensus 181 ~~ea~~l~~~Aa~~aL~~agi~-p~dID--~LI-~~ss~---~~------------~------------~P-s~a~~I~~ 228 (521)
..-...++..|++++++++|++ ..+++ +-+ +.++. .. + .| ..+..++.
T Consensus 68 ~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~ 147 (412)
T COG0304 68 MDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAI 147 (412)
T ss_pred ccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHH
Confidence 3456778899999999999998 34443 222 22321 10 0 22 24567788
Q ss_pred HcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEecc-CCC--------------C-------CCC-CCC
Q 009966 229 HYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTEN-ITM--------------N-------WYG-GND 285 (521)
Q Consensus 229 ~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~-~s~--------------~-------~~~-~~d 285 (521)
.+|++ -..+.+++ +|+++..||..|.++|+.|..+.+++.++|. ++. . +.+ ..+
T Consensus 148 ~~g~~--G~~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~ 224 (412)
T COG0304 148 VFGLK--GPNYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKN 224 (412)
T ss_pred HhCCC--CCcCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCC
Confidence 89987 56778885 9999999999999999999999999999977 221 1 011 123
Q ss_pred ccccccccccccceeeEEEeccCC
Q 009966 286 RSMLLTNCLFRLGGAAILLSNRSS 309 (521)
Q Consensus 286 r~~lv~~~lFgDGAaAvLLs~~~~ 309 (521)
|+ ..++|.||+++||+.-+.
T Consensus 225 Rd----Gfv~gEGag~lVLE~~eh 244 (412)
T COG0304 225 RD----GFVIGEGAGALVLEELEH 244 (412)
T ss_pred CC----CEEEecceeEEEecChhh
Confidence 44 368999999999998664
No 125
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=97.65 E-value=0.00027 Score=75.24 Aligned_cols=86 Identities=10% Similarity=0.141 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHcC-CCC-CCcCEEEEeccC-CCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 187 VIVGAIDELLAKTG-VKP-RDIGILLVNSSL-FNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 187 l~~~Aa~~aL~~ag-i~p-~dID~LI~~ss~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
|+.+|++++|+++| +++ +|||.+++++.. +.........+...+|+. ....+.+ |+++..++..|...+++|
T Consensus 28 L~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV~sG 102 (385)
T PRK06066 28 MMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHINSG 102 (385)
T ss_pred HHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHHHcC
Confidence 34999999999999 998 799999875421 111112223466889985 2334444 778899999999999999
Q ss_pred CCCeEEEEEeccCC
Q 009966 264 PDSYALVVSTENIT 277 (521)
Q Consensus 264 ~~~~aLVVs~E~~s 277 (521)
..++|||++.|..+
T Consensus 103 ~~d~vLv~g~~~~~ 116 (385)
T PRK06066 103 LANVVVVEAHSKPS 116 (385)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999998643
No 126
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=97.62 E-value=0.00095 Score=67.59 Aligned_cols=92 Identities=16% Similarity=0.228 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHH-HHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMV-VNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPD 265 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I-~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~ 265 (521)
|...+.+..+++++++|+.|+-+++.+....-.-...+++ +-.-|++..++..-++ --||+|+.|+..-..-+++|.+
T Consensus 64 Ll~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir~G~y 142 (435)
T KOG1389|consen 64 LLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIRAGFY 142 (435)
T ss_pred HHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHhcCce
Confidence 4478999999999999999999999864221111444444 4456888777777777 6999999999999999999988
Q ss_pred CeEEEEEeccCCCC
Q 009966 266 SYALVVSTENITMN 279 (521)
Q Consensus 266 ~~aLVVs~E~~s~~ 279 (521)
+--|-.+.|.+|.+
T Consensus 143 dIGla~GvESMt~~ 156 (435)
T KOG1389|consen 143 DIGLAAGVESMTTN 156 (435)
T ss_pred eeecccchhhhccc
Confidence 88888999998875
No 127
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.48 E-value=0.003 Score=75.42 Aligned_cols=191 Identities=15% Similarity=0.141 Sum_probs=116.7
Q ss_pred CceEEEEEeEEeCCCCceeehHHHHHHHhhcC----CCCHHHHHHHHHHHHHhC-----CccEEeCCCCCCC------CC
Q 009966 107 RTVYLVNFACYKPDPSEMCSAERLFRMAAKNG----YFTEESLAFQKKVVERSG-----IGKMSGGPKSLFD------NP 171 (521)
Q Consensus 107 ~~v~I~~~g~~lP~~~~~v~~~~~~e~~~~~~----~~~~~~~~f~~ki~~~sG-----i~~r~~~~~~~~~------~p 171 (521)
.+|-|+|++|.+|. .-+.++|-+.+..-. .+.++. +=.+..+ ...++|...+-+. .|
T Consensus 4 ~~IAIiGm~~rfPg---a~~~~~~W~~l~~g~~~i~~ip~~r-----wd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~ 75 (1061)
T COG3321 4 EPIAIIGMACRFPG---ADSPEEFWDLLKEGRDEITEVPADR-----WDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDA 75 (1061)
T ss_pred CcEEEEeccccCCC---CCCHHHHHHHHhcCCceeeecChhh-----hhHhhccCCccccccccccccccccCCccccCH
Confidence 34999999999999 356677777664311 112210 0011111 1112222111000 00
Q ss_pred ---CCchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcC----EEEEec-cCCCCCC-------------------cHHH
Q 009966 172 ---LDNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIG----ILLVNS-SLFNPTP-------------------SLSA 224 (521)
Q Consensus 172 ---~~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID----~LI~~s-s~~~~~P-------------------s~a~ 224 (521)
+-.+..+++.+--..|..+.+-++|+++|+.|+.+. .|+.++ ..+|... -.+.
T Consensus 76 ~fFgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~ 155 (1061)
T COG3321 76 LFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAG 155 (1061)
T ss_pred HHcCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHH
Confidence 012333444445566889999999999999999887 455553 3444322 1578
Q ss_pred HHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCC--CCC--------CCCC--cc--ccc
Q 009966 225 MVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITM--NWY--------GGND--RS--MLL 290 (521)
Q Consensus 225 ~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~--~~~--------~~~d--r~--~lv 290 (521)
+|...|+++ -+++.|. .+||+.+.|+++|...|+.|..+.||+=+....-. .++ .+.. +. .--
T Consensus 156 Risy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~a 232 (1061)
T COG3321 156 RISYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADA 232 (1061)
T ss_pred HHHHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCC
Confidence 889999997 6778888 59999999999999999999988887766554321 111 1111 10 001
Q ss_pred cccccccceeeEEEeccC
Q 009966 291 TNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 291 ~~~lFgDGAaAvLLs~~~ 308 (521)
..++.|.|+++++|.+-.
T Consensus 233 dG~v~geG~g~vvLKrl~ 250 (1061)
T COG3321 233 DGYVRGEGAGVVVLKRLS 250 (1061)
T ss_pred CCEEEeeeEEEEEEEEhH
Confidence 136889999999998743
No 128
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.46 E-value=0.00044 Score=73.84 Aligned_cols=90 Identities=17% Similarity=0.265 Sum_probs=75.6
Q ss_pred HHHHHHHHHHc--CCCCCCcCEEEEeccC--CCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 189 VGAIDELLAKT--GVKPRDIGILLVNSSL--FNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 189 ~~Aa~~aL~~a--gi~p~dID~LI~~ss~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
....+..+++. ++++.+||-+|+.|.. ....+..+..++...|++.+++.+.++ .+|++++.|+..|...+++|.
T Consensus 32 ~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~I~sG~ 110 (392)
T COG0183 32 AALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQAIASGE 110 (392)
T ss_pred HHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHHHHCCC
Confidence 55555555433 6888889999998653 335678888999999999779999999 599999999999999999999
Q ss_pred CCeEEEEEeccCCCC
Q 009966 265 DSYALVVSTENITMN 279 (521)
Q Consensus 265 ~~~aLVVs~E~~s~~ 279 (521)
.+.+|+++.|.+|..
T Consensus 111 ~dvvlagG~E~mS~~ 125 (392)
T COG0183 111 ADVVLAGGVEKMSDA 125 (392)
T ss_pred CCEEEEEeeeeccCC
Confidence 999999999999963
No 129
>PRK07937 lipid-transfer protein; Provisional
Probab=97.23 E-value=0.0015 Score=68.73 Aligned_cols=86 Identities=17% Similarity=0.066 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC--cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP--SLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P--s~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
|+.+|++++|+++|++++|||.++.+++ +.... .....+...+|+.+......+. +++..++..|...+++|.
T Consensus 27 l~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~sG~ 101 (352)
T PRK07937 27 MLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLTGE 101 (352)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhcCC
Confidence 3399999999999999999998854433 22111 1123455667874344454544 247779999999999999
Q ss_pred CCeEEEEEeccCC
Q 009966 265 DSYALVVSTENIT 277 (521)
Q Consensus 265 ~~~aLVVs~E~~s 277 (521)
.++|||++.|..+
T Consensus 102 ~d~VLv~g~~k~~ 114 (352)
T PRK07937 102 VDTALVYGFGKSS 114 (352)
T ss_pred CCEEEEEEecccC
Confidence 9999999999654
No 130
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.13 E-value=0.0012 Score=67.02 Aligned_cols=89 Identities=16% Similarity=0.171 Sum_probs=77.3
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSY 267 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~ 267 (521)
.-|++.+|++++++|+|++-+|+.+. .-+..-..+.+.+=--||+-++.+..++ +.|++++.|+.+|.+-|+.|..+-
T Consensus 35 svaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~G~~di 113 (396)
T KOG1390|consen 35 SVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQTGHADI 113 (396)
T ss_pred HHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhcCCccE
Confidence 99999999999999999999998853 3444445566666667888889999999 899999999999999999999999
Q ss_pred EEEEEeccCCC
Q 009966 268 ALVVSTENITM 278 (521)
Q Consensus 268 aLVVs~E~~s~ 278 (521)
++.-+.|.+|.
T Consensus 114 vVaGGmEsMS~ 124 (396)
T KOG1390|consen 114 VVAGGMESMSN 124 (396)
T ss_pred EEecccchhcc
Confidence 99999999996
No 131
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=96.61 E-value=0.0042 Score=61.76 Aligned_cols=91 Identities=19% Similarity=0.288 Sum_probs=74.5
Q ss_pred CchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHH
Q 009966 173 DNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLI 251 (521)
Q Consensus 173 ~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~ 251 (521)
..+||+ .+|+.++|++++++-++|+--++.-. .+.. ...+-..++||. .++.||+++ .|+.+-.
T Consensus 28 dypd~a----------~ea~tkal~da~ikys~vqqa~vgyvfgdst---cgqraiyevgmt-gipi~nvnn-ncatgss 92 (408)
T KOG1406|consen 28 DYPDFA----------KEAITKALQDAGIKYSEVQQAVVGYVFGDST---CGQRAIYEVGMT-GIPIYNVNN-NCATGSS 92 (408)
T ss_pred CCchHH----------HHHHHHHHHhcCCCHHHHHhhhheeeecCCc---cchHHHHhcccc-CcceeeccC-ccccCch
Confidence 457888 99999999999999998886554321 1111 123455689998 799999997 9999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccCCC
Q 009966 252 SIDLARRLLQVTPDSYALVVSTENITM 278 (521)
Q Consensus 252 AL~lA~~lL~s~~~~~aLVVs~E~~s~ 278 (521)
||-+|+++++++..+.+|..+-|.+++
T Consensus 93 alflakqiiesgn~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 93 ALFLAKQIIESGNSDCVLALGFEKMER 119 (408)
T ss_pred HHHHHHHHHhcCCcceEEeechhhhCC
Confidence 999999999999999999999999876
No 132
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.59 E-value=0.0012 Score=67.29 Aligned_cols=61 Identities=25% Similarity=0.275 Sum_probs=44.9
Q ss_pred cccchhhcccCccccccchHHHHHHHHH--HcCCCCCCCEEEEEEeChHHHhhheeeEEeccC
Q 009966 433 LMEPSRMTLYRFGNTSSSCLWYELAYFE--AKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTI 493 (521)
Q Consensus 433 ~~~~S~~tl~r~GNtsSaSi~~~La~~~--~~g~lk~GD~VlliafGsG~~~~s~v~r~~~~~ 493 (521)
+++||...-.+.||+.++|++..|+-++ ..+..-.|+||.+.++|||........+.....
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~ 205 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGA 205 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCc
Confidence 6677777788899999999999999988 345545799999999999976655555555443
No 133
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.40 E-value=0.038 Score=46.06 Aligned_cols=75 Identities=16% Similarity=0.273 Sum_probs=47.3
Q ss_pred HHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEE---EecCccchHHHHHHHHHHHHHhcCCCCeEEEEE
Q 009966 196 LAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSY---NLGGMGCSAGLISIDLARRLLQVTPDSYALVVS 272 (521)
Q Consensus 196 L~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs 272 (521)
|+++|++++|||.+|.... .......+.+++|++.+.... +.++++|++.+.+|..+.+-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999997643 223456688999998553332 345578888888886665532334678888887
Q ss_pred ec
Q 009966 273 TE 274 (521)
Q Consensus 273 ~E 274 (521)
.-
T Consensus 77 ~G 78 (90)
T PF08541_consen 77 FG 78 (90)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 134
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.14 E-value=0.23 Score=51.79 Aligned_cols=119 Identities=16% Similarity=0.226 Sum_probs=82.4
Q ss_pred HHhHHHHHHHHHHHHHHcCCCCC---CcC-----EEEEeccCC----------------------CCCC----c-HHHHH
Q 009966 182 KETKAVIVGAIDELLAKTGVKPR---DIG-----ILLVNSSLF----------------------NPTP----S-LSAMV 226 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~agi~p~---dID-----~LI~~ss~~----------------------~~~P----s-~a~~I 226 (521)
.....++..|++++|+++++-+. +.| .+| .+..+ +..| . -+.+|
T Consensus 92 s~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~i-Gtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~v 170 (440)
T KOG1394|consen 92 SKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLI-GTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYV 170 (440)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEe-ccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchh
Confidence 35678889999999999998765 222 222 22110 1122 2 25789
Q ss_pred HHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC-----CC----------CC--------
Q 009966 227 VNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMN-----WY----------GG-------- 283 (521)
Q Consensus 227 ~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~-----~~----------~~-------- 283 (521)
.-+||++ -+.+.++ .+|+.+..+|.-|.++++.|..+..|-=++|.+-.. |. ++
T Consensus 171 sm~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD 247 (440)
T KOG1394|consen 171 SMKYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFD 247 (440)
T ss_pred hhhhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCc
Confidence 9999997 6677888 599999999999999999998776666667764211 00 01
Q ss_pred CCccccccccccccceeeEEEeccC
Q 009966 284 NDRSMLLTNCLFRLGGAAILLSNRS 308 (521)
Q Consensus 284 ~dr~~lv~~~lFgDGAaAvLLs~~~ 308 (521)
.+|+ .++.|.|++.++|+.=+
T Consensus 248 ~~Rd----GFVmGEGagvlvlEelE 268 (440)
T KOG1394|consen 248 KKRD----GFVMGEGAGVLVLEELE 268 (440)
T ss_pred cCCC----ceeeccceeEEehHhHH
Confidence 1233 36889999999998644
No 135
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=93.77 E-value=0.18 Score=54.31 Aligned_cols=91 Identities=21% Similarity=0.270 Sum_probs=64.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCc--------cchHHHHHHHHHHHHH
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGM--------GCSAGLISIDLARRLL 260 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gm--------gCsg~l~AL~lA~~lL 260 (521)
..|++++|+++|++++|||.+.++-. .....-....++|+.. ..+|++|- |++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 47999999999999999999986621 1233446777888863 35566663 6888888888888887
Q ss_pred hcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEec
Q 009966 261 QVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSN 306 (521)
Q Consensus 261 ~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~ 306 (521)
+.+ .++.| ++.|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl--------------------~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGL--------------------VTMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEE--------------------EEEEeeccceeEEEEEe
Confidence 644 33432 22366777788888875
No 136
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=93.63 E-value=0.13 Score=51.33 Aligned_cols=87 Identities=20% Similarity=0.150 Sum_probs=69.8
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe----ccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN----SSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP 264 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~----ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~ 264 (521)
.-|++.+|+.+++.++.+|.+|+. +|.|- --++..|--+-|.+.+..++.++ -=|.++..+|-.+.+-+..+.
T Consensus 33 ~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDg--IYl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~I~vge 109 (396)
T KOG1391|consen 33 VVAAKAALKAANVGAEAVDHVIMGNVLASSSDG--IYLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQEICVGE 109 (396)
T ss_pred HHHHHHHHhhcCCChhhcceEEEeeeeeccCCc--eEeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHHhhcCc
Confidence 899999999999999999999975 33331 11223444455566678899999 599999999999999898988
Q ss_pred CCeEEEEEeccCCC
Q 009966 265 DSYALVVSTENITM 278 (521)
Q Consensus 265 ~~~aLVVs~E~~s~ 278 (521)
.+-+|.=++|++|.
T Consensus 110 a~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 110 AEIVLCGGTENMSQ 123 (396)
T ss_pred ceEEEecCcccccc
Confidence 88888889999986
No 137
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=93.37 E-value=0.27 Score=51.52 Aligned_cols=69 Identities=13% Similarity=0.197 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-----EEecCccchHHHHHHHHHHH
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS-----YNLGGMGCSAGLISIDLARR 258 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-----~dl~gmgCsg~l~AL~lA~~ 258 (521)
..+..+++++|+++|++++|||.+++... .+.+-..+..+||++++-.. -+++++++++...+|.-+..
T Consensus 208 ~~~~~~~~~~L~~~gl~~~did~~i~Hq~----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 208 HHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEeCCC----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 34458899999999999999999997643 22345568899999743221 26788889998888876654
No 138
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.23 E-value=0.38 Score=51.11 Aligned_cols=90 Identities=18% Similarity=0.236 Sum_probs=62.0
Q ss_pred HHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHc-----CCCCCe-e--EEEecCccchHHHHHH
Q 009966 182 KETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHY-----KLRGNI-L--SYNLGGMGCSAGLISI 253 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~L-----Gl~~~~-~--~~dl~gmgCsg~l~AL 253 (521)
+.+...+.++++++|+++|++++|||.++.... .+.+-..+.++| |++++- . --++++++|++...+|
T Consensus 268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L 343 (378)
T PRK06816 268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYS----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML 343 (378)
T ss_pred HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcc----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence 344556688999999999999999999996532 233445677776 776432 1 2266778888888888
Q ss_pred HHHHHHHhcCCCCeEEEEEecc
Q 009966 254 DLARRLLQVTPDSYALVVSTEN 275 (521)
Q Consensus 254 ~lA~~lL~s~~~~~aLVVs~E~ 275 (521)
..|..-=+-.+++++++++.|.
T Consensus 344 ~~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 344 DELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHHHHcCCCCCCCEEEEEEecc
Confidence 7664311123568888888775
No 139
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.75 E-value=0.38 Score=49.89 Aligned_cols=91 Identities=14% Similarity=0.207 Sum_probs=59.9
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEE---EecCccchHHHHHHHHH
Q 009966 180 AMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSY---NLGGMGCSAGLISIDLA 256 (521)
Q Consensus 180 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~gmgCsg~l~AL~lA 256 (521)
..++....+.++.+++|+++|++++|||.+++... .+..-..+.++||++.+-... ..+++++++...+|+.+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~----~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~ 308 (338)
T PRK09258 233 LLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQV----GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCC----CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH
Confidence 34455666778899999999999999999886642 233456889999997433222 35666677766666554
Q ss_pred HHHHhcCCCCeEEEEEec
Q 009966 257 RRLLQVTPDSYALVVSTE 274 (521)
Q Consensus 257 ~~lL~s~~~~~aLVVs~E 274 (521)
.+-=+..+++++|+++..
T Consensus 309 ~~~g~~~~Gd~vll~~~G 326 (338)
T PRK09258 309 AEEGFLKPGDRVALLGIG 326 (338)
T ss_pred HHhCCCCCCCEEEEEEec
Confidence 321001245777777654
No 140
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=92.59 E-value=0.34 Score=50.05 Aligned_cols=89 Identities=16% Similarity=0.227 Sum_probs=58.6
Q ss_pred HHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE---EEecCccchHHHHHHHHHH
Q 009966 181 MKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS---YNLGGMGCSAGLISIDLAR 257 (521)
Q Consensus 181 ~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~gmgCsg~l~AL~lA~ 257 (521)
.+++...+.++++++|+++|++++|||.+++... .+.+-..+.++||++++-.. -+.+++++++...+|+.+.
T Consensus 222 ~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~ 297 (326)
T PRK05963 222 FTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQA----NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLAN 297 (326)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHH
Confidence 3456667788999999999999999999887432 24456678899999754322 2445566666666665443
Q ss_pred HHHhcCCCCeEEEEEe
Q 009966 258 RLLQVTPDSYALVVST 273 (521)
Q Consensus 258 ~lL~s~~~~~aLVVs~ 273 (521)
.-=+..+++++|+++.
T Consensus 298 ~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 298 LEQPLREGERLLFAAA 313 (326)
T ss_pred HhCCCCCCCEEEEEEE
Confidence 2101124567777764
No 141
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=92.30 E-value=0.43 Score=48.99 Aligned_cols=76 Identities=17% Similarity=0.183 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHHcCCCC---CeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNHYKLRG---NILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~LGl~~---~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
..++++++|+++|++++|||.++... +......-........++.++ ....-+++++++++++..|..+...++.+
T Consensus 207 ~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~ 286 (332)
T cd00825 207 LARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHG 286 (332)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcC
Confidence 36899999999999999999999774 333333333333444454310 11223667788888888888888777765
No 142
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.81 E-value=0.37 Score=49.83 Aligned_cols=84 Identities=14% Similarity=0.192 Sum_probs=55.3
Q ss_pred HHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE---EEecCccchHHHHHHHHHHH
Q 009966 182 KETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS---YNLGGMGCSAGLISIDLARR 258 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~gmgCsg~l~AL~lA~~ 258 (521)
+.+...+.++++++|+++|++++|||.+++.... ......++++||++++-.. -+.++++|++...+|..+
T Consensus 226 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~----~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~-- 299 (329)
T PRK07204 226 KLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQAS----GPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEA-- 299 (329)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHH--
Confidence 3455567789999999999999999999976431 1235688999999754332 244555555566565543
Q ss_pred HHhcC---CCCeEEEEE
Q 009966 259 LLQVT---PDSYALVVS 272 (521)
Q Consensus 259 lL~s~---~~~~aLVVs 272 (521)
++.+ +++++|+++
T Consensus 300 -~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 300 -IKQKKVQRGNKILLLG 315 (329)
T ss_pred -HHcCCCCCCCEEEEEE
Confidence 4443 345666655
No 143
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=91.25 E-value=0.67 Score=47.57 Aligned_cols=84 Identities=14% Similarity=0.247 Sum_probs=55.5
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEE---EecCccchHHHHHHHHHHHH
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSY---NLGGMGCSAGLISIDLARRL 259 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~gmgCsg~l~AL~lA~~l 259 (521)
+....+.++++++|+++|++++|||.+++... .+..-..+.++||++.+-... .+++++|++.+.+|.-+.
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~-- 289 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELL-- 289 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHH--
Confidence 44455677899999999999999999996532 334567789999998432212 234566666666665443
Q ss_pred HhcC---CCCeEEEEEe
Q 009966 260 LQVT---PDSYALVVST 273 (521)
Q Consensus 260 L~s~---~~~~aLVVs~ 273 (521)
+.+ +.+++|+++.
T Consensus 290 -~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 290 -RTGRIKPGDLLLLVAF 305 (318)
T ss_pred -HcCCCCCCCEEEEEEE
Confidence 333 3466666653
No 144
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.16 E-value=0.54 Score=48.22 Aligned_cols=85 Identities=14% Similarity=0.178 Sum_probs=55.7
Q ss_pred HHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEE---EecCccchHHHHHHHHHHH
Q 009966 182 KETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSY---NLGGMGCSAGLISIDLARR 258 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~gmgCsg~l~AL~lA~~ 258 (521)
+.....+.++++++|+++|++++|||.++.... .+..-.++..++|++.+-... +.++++|+..+..|. +
T Consensus 215 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~ 287 (319)
T PRK09352 215 KFAVRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---E 287 (319)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---H
Confidence 344555778999999999999999999987532 334557788999987532222 344556666665554 3
Q ss_pred HHhcC---CCCeEEEEEe
Q 009966 259 LLQVT---PDSYALVVST 273 (521)
Q Consensus 259 lL~s~---~~~~aLVVs~ 273 (521)
+++.+ +++++|+++.
T Consensus 288 ~~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 288 AVRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 33433 3566666654
No 145
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=91.05 E-value=0.2 Score=50.65 Aligned_cols=90 Identities=11% Similarity=0.127 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTPDS 266 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~~~ 266 (521)
+.+|...+|+++.++.+.||.+|+++. ...-+-.++..-+-.-|.+..+++..+. |+|-+.-.|+...-.|+.++..+
T Consensus 70 ar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliatg~~d 148 (465)
T KOG1392|consen 70 AREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIATGNAD 148 (465)
T ss_pred HHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEeeCCcC
Confidence 389999999999999999999999975 4555666666666667888788999999 89999999999999999998766
Q ss_pred eEEEEEeccCCC
Q 009966 267 YALVVSTENITM 278 (521)
Q Consensus 267 ~aLVVs~E~~s~ 278 (521)
.++-=+.|.+|.
T Consensus 149 vivaggvelmsd 160 (465)
T KOG1392|consen 149 VIVAGGVELMSD 160 (465)
T ss_pred EEEEcceeeccc
Confidence 665556788874
No 146
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.72 E-value=0.79 Score=47.13 Aligned_cols=84 Identities=14% Similarity=0.177 Sum_probs=56.6
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE---EEecCccchHHHHHHHHHHHH
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS---YNLGGMGCSAGLISIDLARRL 259 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~gmgCsg~l~AL~lA~~l 259 (521)
++...+.++++++|+++|++++|||.+++.. +.+.+...+.++||++.+-.. -++++++|++.+.+|..+
T Consensus 222 ~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~--- 294 (325)
T PRK12879 222 WAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLA--- 294 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHH---
Confidence 4445567889999999999999999999763 234556788999999743221 245556677777666443
Q ss_pred HhcC---CCCeEEEEEe
Q 009966 260 LQVT---PDSYALVVST 273 (521)
Q Consensus 260 L~s~---~~~~aLVVs~ 273 (521)
++.+ +++++|+++.
T Consensus 295 ~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 3456666653
No 147
>PRK04262 hypothetical protein; Provisional
Probab=90.72 E-value=0.54 Score=49.24 Aligned_cols=67 Identities=16% Similarity=0.258 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-----EEecCccchHHHHHHHHHH
Q 009966 187 VIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS-----YNLGGMGCSAGLISIDLAR 257 (521)
Q Consensus 187 l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-----~dl~gmgCsg~l~AL~lA~ 257 (521)
.+.++++++|+++|++++|||.+++... .+.+-..++++||++.+-.. -+.+++++++...+|.-+.
T Consensus 210 ~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 210 HIISAAKGLMEKLGLKPSDYDYAVFHQP----NGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHhCcCHHHhceeecCCC----chHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 4567899999999999999999887632 23345678889999743221 2667777777777776554
No 148
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=90.58 E-value=0.64 Score=49.40 Aligned_cols=86 Identities=16% Similarity=0.193 Sum_probs=56.6
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE---EEecCccchHHHHHHHHHHHH
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS---YNLGGMGCSAGLISIDLARRL 259 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~gmgCsg~l~AL~lA~~l 259 (521)
.+...+-++++++|+++|++++|||.++.... .+.+-..++++||++++-.. -+.+++++++.+.+|+-+..-
T Consensus 277 ~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~~ 352 (379)
T PLN02326 277 FAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRS 352 (379)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHHc
Confidence 44455668899999999999999999887643 22344568999999854222 256667777777777655321
Q ss_pred HhcCCCCeEEEEE
Q 009966 260 LQVTPDSYALVVS 272 (521)
Q Consensus 260 L~s~~~~~aLVVs 272 (521)
=+..+++++|+++
T Consensus 353 g~~~~Gd~vll~~ 365 (379)
T PLN02326 353 GKVKKGDVIATAG 365 (379)
T ss_pred CCCCCCCEEEEEE
Confidence 0112345666655
No 149
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=90.42 E-value=1.1 Score=47.86 Aligned_cols=86 Identities=13% Similarity=-0.001 Sum_probs=56.8
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCN 483 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~ 483 (521)
.+|||.+=+|-.-....-...+.||+.++.+.++--.+ -+||+.++|-...+.++..+-+-+.|...+....+.|-...
T Consensus 308 ~~Did~~Ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~l-~~Ghp~gasG~~~~~~~~~~l~~~~~~~g~~~~~~~gg~g~ 386 (394)
T PLN02644 308 ASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGGAV-SLGHPIGCSGARILVTLLGVLRSKNGKYGVAGICNGGGGAS 386 (394)
T ss_pred HHHCCEEEeCcHHHHHHHHHHHHhCCCccccCCCCChH-hhCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCcee
Confidence 47999999988776666667789999887776533333 57898888777776666554332445555553444444456
Q ss_pred heeeEEe
Q 009966 484 SAVWRAL 490 (521)
Q Consensus 484 s~v~r~~ 490 (521)
+++++.+
T Consensus 387 a~~~e~~ 393 (394)
T PLN02644 387 AIVVELM 393 (394)
T ss_pred EEEEEec
Confidence 6777654
No 150
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=90.30 E-value=5.3 Score=39.33 Aligned_cols=117 Identities=17% Similarity=0.041 Sum_probs=75.2
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCC----------------CCCc-HHHHHHH----HcCC--CCCeeEE
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFN----------------PTPS-LSAMVVN----HYKL--RGNILSY 239 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~----------------~~Ps-~a~~I~~----~LGl--~~~~~~~ 239 (521)
....+++.++.+++++. .++|.+|++|..+. ..|. ++.-|+| .+.+ +......
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~~t 108 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGPNT 108 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCceE
Confidence 34566688888888653 57888998875321 2441 2222222 2222 2235667
Q ss_pred EecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEeccCC
Q 009966 240 NLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNRSS 309 (521)
Q Consensus 240 dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~~~ 309 (521)
.|.. |=.++-.||.-|..+|+.+ .+.||||+.|-.....|.....+. ....--|.|++|++.+.
T Consensus 109 al~a-~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~~----~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 109 ALAA-GEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPER----DPPFPYALALVLSPGDS 172 (218)
T ss_pred EEec-CcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhccccc----CCCcCEEEEEEecCCCC
Confidence 7784 8889999999999999999 899999999997664554321110 12235677888886543
No 151
>PRK06840 hypothetical protein; Validated
Probab=90.06 E-value=0.96 Score=46.99 Aligned_cols=81 Identities=23% Similarity=0.302 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCee--EEEecCccchHHHHHHHHHHHHHhc
Q 009966 185 KAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNIL--SYNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~--~~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
...+.++++++|+++|++++|||.++.... .+..-..+..+||++++-. .-+.++++|++.+.+|..+ +++
T Consensus 236 ~~~~~~~i~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~ 308 (339)
T PRK06840 236 IPNFLKVIREALRKSGYTPKDIDYLAILHM----KRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQ 308 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCc----CHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHc
Confidence 345578999999999999999999875321 2334467899999974221 1255566666666666543 344
Q ss_pred C---CCCeEEEEE
Q 009966 263 T---PDSYALVVS 272 (521)
Q Consensus 263 ~---~~~~aLVVs 272 (521)
+ +++++|+++
T Consensus 309 ~~~~~Gd~ill~~ 321 (339)
T PRK06840 309 GKLKDGDLVVLVS 321 (339)
T ss_pred CCCCCCCEEEEEE
Confidence 3 345566555
No 152
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=90.06 E-value=1.3 Score=43.57 Aligned_cols=75 Identities=19% Similarity=0.113 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC---CCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLR---GNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~---~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
.++++++|+++|++++|||.++.. +.+...............+.+ .....-.++++++++++..+..+...++.+
T Consensus 148 ~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~ 226 (254)
T cd00327 148 ARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHE 226 (254)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCC
Confidence 688999999999999999998866 333332332222233333332 011223556667777777776666555544
No 153
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=90.06 E-value=0.6 Score=47.76 Aligned_cols=85 Identities=18% Similarity=0.272 Sum_probs=57.7
Q ss_pred HHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEE---EecCccchHHHHHHHHHHH
Q 009966 182 KETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSY---NLGGMGCSAGLISIDLARR 258 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~gmgCsg~l~AL~lA~~ 258 (521)
+.......++++++|+++|++++|||.++.... .+..-..+.+++|++.+-... +++++++++.+.+|.-+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 292 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA-- 292 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 455666788999999999999999999887632 334456788999997432222 23455666666666544
Q ss_pred HHhcC---CCCeEEEEEe
Q 009966 259 LLQVT---PDSYALVVST 273 (521)
Q Consensus 259 lL~s~---~~~~aLVVs~ 273 (521)
++.+ +++++|+++.
T Consensus 293 -~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 -IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3333 4677877764
No 154
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=89.23 E-value=0.81 Score=47.36 Aligned_cols=80 Identities=10% Similarity=0.167 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEE---EecCccchHHHHHHHHHHHHHhc
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSY---NLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
..+-.+++++|+++|++++|||.+++.... +.....+.++||++++-... +.++++|++...+|.-+. +.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~---~~ 298 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAI---QN 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHH---Hh
Confidence 446678899999999999999999876432 33456789999997432222 455667777777776553 33
Q ss_pred C---CCCeEEEEE
Q 009966 263 T---PDSYALVVS 272 (521)
Q Consensus 263 ~---~~~~aLVVs 272 (521)
+ +.+++|+++
T Consensus 299 g~~~~Gd~vll~~ 311 (326)
T CHL00203 299 NKIQPGQIIVLSG 311 (326)
T ss_pred CCCCCCCEEEEEE
Confidence 3 356666665
No 155
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=88.57 E-value=1.5 Score=47.02 Aligned_cols=93 Identities=23% Similarity=0.258 Sum_probs=58.2
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCc--------cchHHHHHHHHHHHHH
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGM--------GCSAGLISIDLARRLL 260 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gm--------gCsg~l~AL~lA~~lL 260 (521)
..|++++|+++|++|+|||.+-++- ......-...+.||+..+-..+|.+|. |++|...-++++++|-
T Consensus 299 ~~A~~~al~~AGl~~~DID~iei~d----afa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~ 374 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDVIELNE----AFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHcCcCccCc----HhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHh
Confidence 6899999999999999999887431 122233445677887433355666652 3445555566666654
Q ss_pred hcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEec
Q 009966 261 QVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSN 306 (521)
Q Consensus 261 ~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~ 306 (521)
.. ..++.| .+.|.-|..+.|+||++
T Consensus 375 ~~-~~~~g~--------------------~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 375 RT-GGRFAL--------------------CTMCIGVGQGIAIAIER 399 (400)
T ss_pred hc-CCCeEE--------------------EEEcccCCceeEEEEEe
Confidence 32 233433 23366677777888775
No 156
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=88.12 E-value=1.3 Score=47.70 Aligned_cols=93 Identities=22% Similarity=0.273 Sum_probs=57.2
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCc--------cchHHHHHHHHHHHHH
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGM--------GCSAGLISIDLARRLL 260 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gm--------gCsg~l~AL~lA~~lL 260 (521)
..|++++|+++|++|+|||++-++- ..+...-...+.||+.++-..+|.+|. |++|....++++++|-
T Consensus 300 ~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr 375 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLE 375 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHH
Confidence 5799999999999999999887431 122333445677888543356666652 3444445555666654
Q ss_pred hcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEec
Q 009966 261 QVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSN 306 (521)
Q Consensus 261 ~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~ 306 (521)
.. ..++.| ++.|.-|-.++|+|+++
T Consensus 376 ~~-~~~~g~--------------------~~~c~~gG~g~a~~~e~ 400 (401)
T PRK09050 376 RT-GGRYAL--------------------CTMCIGVGQGIALAIER 400 (401)
T ss_pred hc-CCCeEE--------------------EEEcccccceeEEEEEe
Confidence 32 223332 23466666777777764
No 157
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=87.94 E-value=2.1 Score=45.94 Aligned_cols=84 Identities=15% Similarity=0.047 Sum_probs=50.3
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEE-EEeChHHHh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQ-IAFGSGFKC 482 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~Vll-iafGsG~~~ 482 (521)
++|||.+=+|-.-....-...+.||+.++++.+| -.+--+||...+|-...+.++...=+=+.|++-+. +..|.|..
T Consensus 312 ~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~~-GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~g- 389 (397)
T PRK06954 312 AAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVN-GGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEA- 389 (397)
T ss_pred HHHCCEEehhhHHHHHHHHHHHHhCCCcccCCcC-CChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccchh-
Confidence 4799999888776554444568899988877542 23444788888885555544443212245665433 44444433
Q ss_pred hheeeEE
Q 009966 483 NSAVWRA 489 (521)
Q Consensus 483 ~s~v~r~ 489 (521)
.+++++.
T Consensus 390 ~a~~~e~ 396 (397)
T PRK06954 390 TAMGIEL 396 (397)
T ss_pred hEEEEEe
Confidence 4566553
No 158
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=87.85 E-value=1.4 Score=46.61 Aligned_cols=85 Identities=14% Similarity=0.231 Sum_probs=56.3
Q ss_pred HHhHHHHHHHHHHHHHHcCCCCCCcCEEEEec-cCCCCCCcHHHHHHHH-cCCCC-Ce----eEEEecCccchHHHHHHH
Q 009966 182 KETKAVIVGAIDELLAKTGVKPRDIGILLVNS-SLFNPTPSLSAMVVNH-YKLRG-NI----LSYNLGGMGCSAGLISID 254 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~-LGl~~-~~----~~~dl~gmgCsg~l~AL~ 254 (521)
+++...+.++++++|+++|++++|||.+++.. +.. +-..+.++ ||+.. .- .--+.++++|++...+|+
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~-----~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~ 341 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANIN-----MNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFH 341 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHH
Confidence 56677788999999999999999999999763 321 22234555 56431 11 123567788888888887
Q ss_pred HHHHHHhcCCCCeEEEEEe
Q 009966 255 LARRLLQVTPDSYALVVST 273 (521)
Q Consensus 255 lA~~lL~s~~~~~aLVVs~ 273 (521)
.+.+-+ .+++++|+++.
T Consensus 342 ~~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 342 KHSDDL--AAGDLGVICSF 358 (372)
T ss_pred HHhccC--CCCCEEEEEEe
Confidence 764432 34566666653
No 159
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=86.59 E-value=2.6 Score=37.77 Aligned_cols=69 Identities=23% Similarity=0.368 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGG--------MGCSAGLISIDLARRLL 260 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------mgCsg~l~AL~lA~~lL 260 (521)
..|++++|+++|++++|||.+=++-. .-+..-...+.||+.+ ..+|.+| .||+|...-++++.+|-
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHHH
Confidence 68999999999999999999877621 1123344566677753 3445444 36788888888888876
Q ss_pred hcC
Q 009966 261 QVT 263 (521)
Q Consensus 261 ~s~ 263 (521)
+.+
T Consensus 99 ~~~ 101 (123)
T PF02803_consen 99 RRG 101 (123)
T ss_dssp HHT
T ss_pred Hhc
Confidence 543
No 160
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=86.40 E-value=3.5 Score=44.11 Aligned_cols=81 Identities=10% Similarity=-0.069 Sum_probs=51.4
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchH---HHHHHHHHHcCCCCCCCEEEEEEeChHH
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCL---WYELAYFEAKGRIRKGDRTWQIAFGSGF 480 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi---~~~La~~~~~g~lk~GD~VlliafGsG~ 480 (521)
++|||.+=+|-.-....-...+.||+.++.+.+|-- +--+||...++- ...|.+.++. +.|...+.-..|.|-
T Consensus 305 ~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~GG-~la~Ghp~gatG~r~~~~l~~~lr~---~~~~~gl~~~~~ggg 380 (390)
T PRK06504 305 IDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGG-AIALGHPLGASGTKLMTTLVHALKQ---RGKRYGLQTMCEGGG 380 (390)
T ss_pred HHHCCEEEecccchHHHHHHHHHhCCCCCCcCCCCc-HHhcCCCcchhHHHHHHHHHHHHHh---hCCCeEEEEEeeccc
Confidence 489999999998877777788999999887754322 334788886666 6666666653 234444433333332
Q ss_pred HhhheeeE
Q 009966 481 KCNSAVWR 488 (521)
Q Consensus 481 ~~~s~v~r 488 (521)
...+++++
T Consensus 381 ~g~a~ile 388 (390)
T PRK06504 381 MANVTIVE 388 (390)
T ss_pred ceeEEEEE
Confidence 33334443
No 161
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=86.22 E-value=1.5 Score=46.11 Aligned_cols=87 Identities=15% Similarity=0.204 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCC-C--e--eEEEecCccchHHHHHHHHHHHHHh
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLRG-N--I--LSYNLGGMGCSAGLISIDLARRLLQ 261 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~-~--~--~~~dl~gmgCsg~l~AL~lA~~lL~ 261 (521)
..++.+++|+++|++|+|||.|+.. +++.+.....+..+..-+|-.. . + ..-.++..+.+++...+..+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999865 4333222222333444444211 1 1 1112333344455555555555566
Q ss_pred cC--CCCeEEEEEec
Q 009966 262 VT--PDSYALVVSTE 274 (521)
Q Consensus 262 s~--~~~~aLVVs~E 274 (521)
.+ +..++||.++.
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 65 46788888754
No 162
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=85.87 E-value=2.9 Score=44.44 Aligned_cols=84 Identities=11% Similarity=-0.046 Sum_probs=52.2
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCN 483 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~ 483 (521)
.+|||.+=+|-.-....-...+.||+.++.+.++-- +--+||...++-...+.++..+=+-+.+.+.+....|.|-...
T Consensus 297 ~~did~~e~~d~Fa~~~~~~~e~lG~~~~pvN~~GG-~l~~Ghp~gasG~~~~~e~~~qL~~~~~~~gl~~~~gggg~~~ 375 (382)
T PRK07801 297 IDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGG-AIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTAN 375 (382)
T ss_pred HHHcCEeeecccchHHHHHHHHHhCCCchhcCCCcc-hhhhcCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccccee
Confidence 479999999988777777778899999887754322 3347888777766655554442111223334444455554445
Q ss_pred heeeE
Q 009966 484 SAVWR 488 (521)
Q Consensus 484 s~v~r 488 (521)
+++++
T Consensus 376 ~~vl~ 380 (382)
T PRK07801 376 VTIIE 380 (382)
T ss_pred EEEEE
Confidence 55554
No 163
>PRK05790 putative acyltransferase; Provisional
Probab=85.54 E-value=3.3 Score=44.22 Aligned_cols=85 Identities=13% Similarity=-0.023 Sum_probs=52.0
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCN 483 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~ 483 (521)
.+|||.+=+|-.-....-...+.||+.+..+.+| -..--+||...++=...+.++..+=+=+.+.+.+.-.-|.|....
T Consensus 308 ~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~~~gl~~~~~~~g~g~ 386 (393)
T PRK05790 308 LADLDLIEINEAFAAQALAVEKELGLDPEKVNVN-GGAIALGHPIGASGARILVTLLHEMKRRGAKKGLATLCIGGGQGV 386 (393)
T ss_pred HHHCCEEEeCcHHHHHHHHHHHHhCCChhhcCCC-cchhhhCcchhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCCcee
Confidence 4799999998765444445678899987666432 223348999887766666555543221233345554555555566
Q ss_pred heeeEE
Q 009966 484 SAVWRA 489 (521)
Q Consensus 484 s~v~r~ 489 (521)
+++++.
T Consensus 387 ~~~~e~ 392 (393)
T PRK05790 387 ALIVER 392 (393)
T ss_pred EEEEEc
Confidence 666653
No 164
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=84.77 E-value=3.8 Score=44.04 Aligned_cols=54 Identities=9% Similarity=-0.018 Sum_probs=37.0
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHH
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAY 458 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~ 458 (521)
.+|||.|-+|-.-....-...+.||+.++++.++- ..--+||...++=...+.+
T Consensus 317 ~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~G-G~la~GHP~GAsG~~~~~~ 370 (402)
T PRK08242 317 VDDIDLFELNEAFASVVLRFMQALDIPHDKVNVNG-GAIAMGHPLGATGAMILGT 370 (402)
T ss_pred HHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcCC-CHHhcCCcHHHHHHHHHHH
Confidence 48999999998877666678899999888775422 2333677766554444433
No 165
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=84.64 E-value=3.5 Score=44.27 Aligned_cols=83 Identities=12% Similarity=-0.002 Sum_probs=44.8
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCc--ccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEE-EEeChHH
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNE--WLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQ-IAFGSGF 480 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~--e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~Vll-iafGsG~ 480 (521)
++|||.+-+|-.-....-...+.||+.+ +.+.++-- +--+||...++=...+.++..+=+=+.|...+. +..|.|.
T Consensus 313 ~~DID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~GG-~la~GHp~gasG~~~~~e~~~qLr~~~~~~g~~~~c~~gG~ 391 (400)
T TIGR02430 313 IDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGG-AIALGHPLGASGARLVLTALRQLERSGGRYALCTMCIGVGQ 391 (400)
T ss_pred HHHCCCcccCcHHHHHHHHHHHHcCCCCCCCeECCCCc-hHhccChHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccCh
Confidence 4799999988776666666778899854 44432111 223788877744444333333211134444333 3344443
Q ss_pred HhhheeeE
Q 009966 481 KCNSAVWR 488 (521)
Q Consensus 481 ~~~s~v~r 488 (521)
. .+++++
T Consensus 392 g-~a~~~e 398 (400)
T TIGR02430 392 G-IALAIE 398 (400)
T ss_pred h-hEEEEE
Confidence 3 345554
No 166
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=84.48 E-value=3.1 Score=44.51 Aligned_cols=66 Identities=26% Similarity=0.378 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGG--------MGCSAGLISIDLARRLL 260 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------mgCsg~l~AL~lA~~lL 260 (521)
..|++++|+++|++|+|||.+=++- ..+...-+..+.||+.+. .+|.+| .||+|...-++++++|-
T Consensus 295 ~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~~--~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~ 368 (394)
T PRK06445 295 VPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDPE--TVNIKGGAIAIGHPLGATGARIVGTLARQLQ 368 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCcc--ccCCCCCHHHcCCCccchHHHHHHHHHHHHH
Confidence 6799999999999999999987652 123334455667777532 345444 36677777777777775
No 167
>PRK08256 lipid-transfer protein; Provisional
Probab=84.36 E-value=6.5 Score=41.93 Aligned_cols=75 Identities=17% Similarity=0.073 Sum_probs=49.8
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcc------------------cccchhhcccCccccccchHHHHHHHHHHc--C
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEW------------------LMEPSRMTLYRFGNTSSSCLWYELAYFEAK--G 463 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e------------------~~~~S~~tl~r~GNtsSaSi~~~La~~~~~--g 463 (521)
.+|||.+-+|..-....-...+.||+.++ .+.++=- +--+||...++=...+.++..+ |
T Consensus 281 ~~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG-~ls~Ghp~gasG~~~~~e~~~QL~g 359 (391)
T PRK08256 281 PEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGG-LLSKGHPLGATGLAQCAELTWQLRG 359 (391)
T ss_pred HHHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCc-cccCCCCccHHHHHHHHHHHHHhcC
Confidence 47999999999988887888899999976 4433222 2237999766655555554442 2
Q ss_pred -----CCCCCCEEEEEEeChH
Q 009966 464 -----RIRKGDRTWQIAFGSG 479 (521)
Q Consensus 464 -----~lk~GD~VlliafGsG 479 (521)
.++...+.+..+.|.|
T Consensus 360 ~ag~~Qv~~~~~~l~~~~G~~ 380 (391)
T PRK08256 360 TAGARQVEGARLALQHNLGLG 380 (391)
T ss_pred CcCCCcCCccceEEEeccccc
Confidence 2334556667777744
No 168
>PLN02287 3-ketoacyl-CoA thiolase
Probab=84.13 E-value=3.8 Score=44.82 Aligned_cols=90 Identities=13% Similarity=0.033 Sum_probs=53.1
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCC--CEEEE-EEeChHH
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKG--DRTWQ-IAFGSGF 480 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~G--D~Vll-iafGsG~ 480 (521)
.+|||.+=+|-.-....-...+.||+.++.+.+|-- .--+||...+|=...+.++..+=+-+.| ...+. +..|.|
T Consensus 348 ~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG-~la~GHp~gAsG~~~v~~l~~qL~~~~~~~~~gl~~~c~ggG- 425 (452)
T PLN02287 348 LDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGG-AIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTG- 425 (452)
T ss_pred HHHCCEEEecchHHHHHHHHHHHcCCCccccCCCCc-HHhccCcHHHHHHHHHHHHHHHHHhcCCCCCeeEEEEccccC-
Confidence 479999999965444444456889998877754322 3347888666655544444432121223 33333 333333
Q ss_pred HhhheeeEEeccCCC
Q 009966 481 KCNSAVWRALRTINP 495 (521)
Q Consensus 481 ~~~s~v~r~~~~~~~ 495 (521)
.-.+++++.+..++.
T Consensus 426 ~g~a~~ie~~~~~~~ 440 (452)
T PLN02287 426 MGAAAVFERGDSVDE 440 (452)
T ss_pred ceeEEEEEecCchhh
Confidence 346789999988864
No 169
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=83.85 E-value=3.4 Score=44.36 Aligned_cols=91 Identities=22% Similarity=0.304 Sum_probs=55.4
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGG--------MGCSAGLISIDLARRLL 260 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------mgCsg~l~AL~lA~~lL 260 (521)
..|++++|+++|++|+|||++-++- ......-...+.||+.. ..+|.+| .|++|....+.++.+|-
T Consensus 300 ~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~ 373 (399)
T PRK09052 300 IEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHGLR 373 (399)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999987431 12223344556688752 2233333 25555556666666654
Q ss_pred hcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEec
Q 009966 261 QVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSN 306 (521)
Q Consensus 261 ~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~ 306 (521)
..+ .++. +.+.|.-|-.|+|+||++
T Consensus 374 ~~~-~~~g--------------------~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 374 RTN-LKYG--------------------MVTMCVGTGMGAAGIFER 398 (399)
T ss_pred hcC-CCeE--------------------EEEEcccCCceeEEEEEe
Confidence 322 2232 233466677777888764
No 170
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=83.82 E-value=2.2 Score=45.66 Aligned_cols=92 Identities=20% Similarity=0.247 Sum_probs=54.3
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGG--------MGCSAGLISIDLARRLL 260 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------mgCsg~l~AL~lA~~lL 260 (521)
..|++++|+++|++|+|||.+-++-. .+...-...+.||+.. ..+|++| .|++|....++++.++=
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d~----f~~~~~~~~e~lg~~~--~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~ 367 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANEA----FAAQSLAVGKELGWDA--AKVNVNGGAIALGHPIGASGCRVLVTLLHEMI 367 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCc----cHHHHHHHHHHhCCCC--ccCCcCCCHHHhCccHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999886521 2333445567788742 2345554 12333333344443332
Q ss_pred hcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEecc
Q 009966 261 QVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSNR 307 (521)
Q Consensus 261 ~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~~ 307 (521)
+. ..++ -+.+.|.-|-.++|+||+++
T Consensus 368 ~~-~~~~--------------------gl~~~c~~gG~g~a~~~e~~ 393 (393)
T PRK05656 368 RR-DAKK--------------------GLATLCIGGGQGVALAIERD 393 (393)
T ss_pred Hc-CCCE--------------------EEEEEcccCcceEEEEEecC
Confidence 11 1222 23345777777888888763
No 171
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=83.72 E-value=3.2 Score=44.19 Aligned_cols=83 Identities=12% Similarity=-0.041 Sum_probs=50.1
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCN 483 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~ 483 (521)
.+|||.+-+|-......-...+.||+....+.+ .-.+--+||+..++-...+.++..+=+=+.+.+.+..+.+.|-.-.
T Consensus 303 ~~did~~e~~d~fa~~~~~~~e~lG~~~~pvn~-~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gG~g~ 381 (386)
T TIGR01930 303 ISDIDLFEINEAFAAQVLACIKELGLDLEKVNV-NGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGGGQGI 381 (386)
T ss_pred HHHCCeeehcchhHHHHHHHHHHhCCChhhcCC-CCChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEeccCCceE
Confidence 479999999977755555566889986555532 1223347999877777776665553221245666665555443333
Q ss_pred heee
Q 009966 484 SAVW 487 (521)
Q Consensus 484 s~v~ 487 (521)
++++
T Consensus 382 ~~~~ 385 (386)
T TIGR01930 382 AVIL 385 (386)
T ss_pred EEEe
Confidence 4443
No 172
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=83.40 E-value=3.5 Score=44.29 Aligned_cols=85 Identities=9% Similarity=-0.099 Sum_probs=49.8
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCN 483 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~ 483 (521)
++|||.+=+|-.-....-...+.||+.++.+.+| -..--+||...++-...+.++..+=+-++|-..+....+.|-.-.
T Consensus 320 ~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~-GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~gg~g~ 398 (406)
T PRK07851 320 IDDIDLVEINEAFAAQVLPSARELGIDEDKLNVS-GGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQGM 398 (406)
T ss_pred HHHCCeehhhhHHHHHHHHHHHHhCCCccccCCC-CChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChhh
Confidence 4789988777654443334457889876655432 233447999888777777666554332444455544333443445
Q ss_pred heeeEE
Q 009966 484 SAVWRA 489 (521)
Q Consensus 484 s~v~r~ 489 (521)
+++++.
T Consensus 399 a~~~e~ 404 (406)
T PRK07851 399 AMVLER 404 (406)
T ss_pred EEEEEe
Confidence 566654
No 173
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=82.72 E-value=6.2 Score=42.20 Aligned_cols=84 Identities=6% Similarity=-0.099 Sum_probs=49.9
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEE-EeChHHHh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQI-AFGSGFKC 482 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~Vlli-afGsG~~~ 482 (521)
.+|||.+=+|-.-....-...+.||++.+.+.++- -+--+||...++-...+.++..+=+-+.|.+.+.. ..|.|. -
T Consensus 302 ~~did~~ei~d~F~~~~l~~~e~lg~~~~pvN~~G-G~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~~~~c~~gg~-g 379 (387)
T PRK07850 302 IGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNG-GAIALGHPVGSTGARLITTALHELERTDKSTALITMCAGGAL-S 379 (387)
T ss_pred HHHcCeeeecccchHHHHHHHHHcCCCCCCcCCCC-chhhcCCCcchhHHHHHHHHHHHHHhcCCCeEEEEEccccCc-e
Confidence 47999999998876665566789999877665422 23348998877766555554443221233333332 333333 3
Q ss_pred hheeeEE
Q 009966 483 NSAVWRA 489 (521)
Q Consensus 483 ~s~v~r~ 489 (521)
.+++++.
T Consensus 380 ~a~~~e~ 386 (387)
T PRK07850 380 TGTIIER 386 (387)
T ss_pred eEEEEEe
Confidence 4566554
No 174
>PRK09051 beta-ketothiolase; Provisional
Probab=82.68 E-value=2.5 Score=45.30 Aligned_cols=91 Identities=22% Similarity=0.356 Sum_probs=56.6
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCc--------cchHHHHHHHHHHHHH
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGM--------GCSAGLISIDLARRLL 260 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gm--------gCsg~l~AL~lA~~lL 260 (521)
..|++++|+++|++|+|||++=++- ..+...-...+.||+.+ ..+|.+|- |++|....+.++++|-
T Consensus 295 ~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~ 368 (394)
T PRK09051 295 VPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNGSGISLGHPVGATGAIITVKALYELQ 368 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCccHHHhcchHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999987642 13344455667888852 35566651 3334444455555553
Q ss_pred hcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEec
Q 009966 261 QVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSN 306 (521)
Q Consensus 261 ~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~ 306 (521)
+.+ .++. +.+.|.-|-.++|+||++
T Consensus 369 ~~~-~~~g--------------------~~~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 369 RIG-GRYA--------------------LVTMCIGGGQGIAAIFER 393 (394)
T ss_pred hcC-CCEE--------------------EEEEccccChhhEEEEEe
Confidence 321 2222 233466677777777765
No 175
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=82.54 E-value=5.5 Score=42.23 Aligned_cols=69 Identities=17% Similarity=0.206 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEec--------CccchHHHHHHHHHHHH
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLG--------GMGCSAGLISIDLARRL 259 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~--------gmgCsg~l~AL~lA~~l 259 (521)
...|++++|+++|++|+|||.+..+-. .........+.||+.+ ..+|.+ -.|++|......+..++
T Consensus 260 ~~~a~~~al~~Agl~~~Did~~ei~ea----fa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql 333 (361)
T PRK06690 260 PIFAVNKLLNEMNMKVEDIDYFEINEA----FASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQA 333 (361)
T ss_pred HHHHHHHHHHHcCCCHHHcCEeeecch----hHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHHH
Confidence 368999999999999999999976521 2233345567788753 233443 23677777777777776
Q ss_pred Hhc
Q 009966 260 LQV 262 (521)
Q Consensus 260 L~s 262 (521)
-+.
T Consensus 334 ~~~ 336 (361)
T PRK06690 334 KRE 336 (361)
T ss_pred HHh
Confidence 543
No 176
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=82.07 E-value=4.2 Score=43.51 Aligned_cols=83 Identities=12% Similarity=0.029 Sum_probs=50.7
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEE-EEeChHHHh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQ-IAFGSGFKC 482 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~Vll-iafGsG~~~ 482 (521)
.+|||.+=+|-.-....-...+.||+.++.+.++-- .--+||...+|=...+.++..+=+-+.|++.+. +..|.| .-
T Consensus 308 ~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~GG-~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG-~g 385 (393)
T PRK08235 308 VEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGG-AVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGG-QG 385 (393)
T ss_pred HHHCCeehhcchhHHHHHHHHHHhCCCcccCCcCCc-hHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-ce
Confidence 478999988877665566667899998877754222 334788877776665555544322245566554 333444 34
Q ss_pred hheeeE
Q 009966 483 NSAVWR 488 (521)
Q Consensus 483 ~s~v~r 488 (521)
.+++|+
T Consensus 386 ~a~~~e 391 (393)
T PRK08235 386 DAVLIE 391 (393)
T ss_pred EEEEEE
Confidence 555555
No 177
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=81.80 E-value=3.1 Score=43.69 Aligned_cols=88 Identities=15% Similarity=0.119 Sum_probs=59.6
Q ss_pred HHhHHHHHHHHHHHHHHc--CCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCe------eEEEecCccchHHHHHH
Q 009966 182 KETKAVIVGAIDELLAKT--GVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNI------LSYNLGGMGCSAGLISI 253 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~a--gi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~------~~~dl~gmgCsg~l~AL 253 (521)
+.+...+.++++++|+++ |++++|||.+++.... +.+-..+..+||++++- ..-+.+++++++...+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~----~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGG----RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCCC----hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 345566778899999999 9999999999876432 23445688899987432 12367778888888888
Q ss_pred HHHHHHHhcCCCCeEEEEEe
Q 009966 254 DLARRLLQVTPDSYALVVST 273 (521)
Q Consensus 254 ~lA~~lL~s~~~~~aLVVs~ 273 (521)
.-+.+-=+..+++++|+++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 76643211123566666653
No 178
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=81.60 E-value=4.2 Score=43.56 Aligned_cols=55 Identities=4% Similarity=-0.174 Sum_probs=34.6
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHH
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYF 459 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~ 459 (521)
.+|||.+-+|-.-....-...+.||+.++++.++- ..--+||...++=...+..+
T Consensus 307 ~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~G-G~~a~GHp~gatG~r~~~~l 361 (392)
T PRK07108 307 VDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNG-GAIAVGHPYGVSGARLTGHA 361 (392)
T ss_pred HHHcCchHhhhHHHHHHHHHHHhcCCCccccCCCC-ChHHhCcchhhhHHHHHHHH
Confidence 47899998886554444445688999887775422 23347887776654444333
No 179
>PLN03169 chalcone synthase family protein; Provisional
Probab=81.32 E-value=4.2 Score=43.52 Aligned_cols=88 Identities=16% Similarity=0.255 Sum_probs=57.2
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE------EEecCccchHHHHHHHHH
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS------YNLGGMGCSAGLISIDLA 256 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~gmgCsg~l~AL~lA 256 (521)
.+...+-..++++|+++|++++|||.+.+...+.+ +.+-..++++||++++-.. -+.++|++++.+.+|+.+
T Consensus 278 ~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n--~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~ 355 (391)
T PLN03169 278 KIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGG--PAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM 355 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCC--HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH
Confidence 45555667789999999999999994433323222 4566788999999854322 367888888888888765
Q ss_pred HHH--Hh-cCCCCeEEEEE
Q 009966 257 RRL--LQ-VTPDSYALVVS 272 (521)
Q Consensus 257 ~~l--L~-s~~~~~aLVVs 272 (521)
..- ++ ..+++++|+++
T Consensus 356 ~~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 356 REELKKKGEEDEEWGLILA 374 (391)
T ss_pred HHhhcccCCCCCcEEEEEE
Confidence 421 11 11345555554
No 180
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=80.72 E-value=5.6 Score=42.29 Aligned_cols=40 Identities=23% Similarity=0.349 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLR 233 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 233 (521)
..|++++++++|++|+|||.+-.. +. +...-+..+.||+.
T Consensus 288 ~~a~~~a~~~Agi~~~did~~e~~d~f-----~~~~~~~~e~lg~~ 328 (386)
T cd00751 288 VPAIPKALKRAGLTLDDIDLIEINEAF-----AAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeechh-----HHHHHHHHHHhCCC
Confidence 589999999999999999988754 21 12234445678875
No 181
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=80.57 E-value=8.7 Score=41.25 Aligned_cols=85 Identities=13% Similarity=0.043 Sum_probs=47.6
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcc---cccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEE-EEeChH
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEW---LMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQ-IAFGSG 479 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e---~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~Vll-iafGsG 479 (521)
++|||.+-+|-.-....-...+.||+.++ ++.++ -..--+||..+++=...+.++..+=+-+.|.+.+. +..|.|
T Consensus 315 ~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~gg 393 (404)
T PRK06205 315 LDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVN-GSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGGG 393 (404)
T ss_pred HHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCC-CCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCC
Confidence 47999999998776666666788998763 44321 12334788876665444444433211123344443 333333
Q ss_pred HHhhheeeEEe
Q 009966 480 FKCNSAVWRAL 490 (521)
Q Consensus 480 ~~~~s~v~r~~ 490 (521)
.-.+++++.+
T Consensus 394 -~g~a~~~e~~ 403 (404)
T PRK06205 394 -QGLAAVFERV 403 (404)
T ss_pred -hhhEEEEEec
Confidence 3356666654
No 182
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=80.54 E-value=3 Score=43.50 Aligned_cols=52 Identities=19% Similarity=0.337 Sum_probs=42.1
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCC
Q 009966 180 AMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGN 235 (521)
Q Consensus 180 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~ 235 (521)
-.+++...+.++++++|+++|++++|||.+|... .-..+-..++++||++++
T Consensus 217 vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~ 268 (323)
T COG0332 217 VFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEE 268 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHH
Confidence 4578899999999999999999999999998543 223455788999999654
No 183
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=80.49 E-value=3.6 Score=43.37 Aligned_cols=71 Identities=14% Similarity=0.166 Sum_probs=50.0
Q ss_pred HHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-E---EecCccchHHHHHHHHH
Q 009966 182 KETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS-Y---NLGGMGCSAGLISIDLA 256 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-~---dl~gmgCsg~l~AL~lA 256 (521)
+.+...+-.+++++|+++|++++|||.+++... .+.+-..+.++||++++-.. . ..++++.++...+|+-+
T Consensus 238 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~----~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~ 312 (353)
T PRK12880 238 NMALECEPKSFKEILEFSKVDEKDIAFHLFHQS----NAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL 312 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH
Confidence 345556677899999999999999999997643 23345689999999853322 1 24566766766666633
No 184
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=80.09 E-value=6.8 Score=41.60 Aligned_cols=81 Identities=17% Similarity=0.301 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCC-----CCeeEE-EecCccchHHHHHHHHHHHH
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLR-----GNILSY-NLGGMGCSAGLISIDLARRL 259 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~-----~~~~~~-dl~gmgCsg~l~AL~lA~~l 259 (521)
.-...|+++.+++.|.+|+|.|.+++.. |.|-+....+..++.+ +..... .++++.|.+.+.+| |.-|
T Consensus 209 ~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as~L 282 (377)
T COG3425 209 KHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--ASLL 282 (377)
T ss_pred HHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HHHH
Confidence 3456899999999999999999998764 3445556666666655 344444 68899999988665 3333
Q ss_pred HhcC-CCCeEEEEE
Q 009966 260 LQVT-PDSYALVVS 272 (521)
Q Consensus 260 L~s~-~~~~aLVVs 272 (521)
=++. +++++|+++
T Consensus 283 ~~a~~~G~rIl~~S 296 (377)
T COG3425 283 DNAKLPGDRILLFS 296 (377)
T ss_pred hhcCCCCCEEEEEe
Confidence 3333 445555543
No 185
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=78.34 E-value=6.9 Score=39.98 Aligned_cols=91 Identities=12% Similarity=0.131 Sum_probs=59.5
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCC-Cee------EEEecCccchHHHHH
Q 009966 180 AMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRG-NIL------SYNLGGMGCSAGLIS 252 (521)
Q Consensus 180 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~-~~~------~~dl~gmgCsg~l~A 252 (521)
..+.+...+..+++++|+++|++ +|||.++...... +..-..+.++++++. .+. .-++++++|+....+
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 34567778889999999999999 9999887653321 155677888998742 111 235566777777777
Q ss_pred HHHHHHHHhcCCCCeEEEEEec
Q 009966 253 IDLARRLLQVTPDSYALVVSTE 274 (521)
Q Consensus 253 L~lA~~lL~s~~~~~aLVVs~E 274 (521)
|..+..--+-.+.+++|+++.-
T Consensus 293 L~~~~~~~~~~~Gd~vl~~~~G 314 (324)
T cd00827 293 LASLLESGKLKAGDRVLLFSYG 314 (324)
T ss_pred HHHHHhcCCCCCCCEEEEEEec
Confidence 7655321111245777777754
No 186
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=78.14 E-value=5.7 Score=43.94 Aligned_cols=78 Identities=22% Similarity=0.166 Sum_probs=48.3
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCC-eeEEEecCccchH--------HHHHHHHHHHH
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGN-ILSYNLGGMGCSA--------GLISIDLARRL 259 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~-~~~~dl~gmgCsg--------~l~AL~lA~~l 259 (521)
..|++++++++|++++|||++=+..+ .|...-+-.+.||+.++ -..+|++| |.-+ ++..+--+..-
T Consensus 295 ~~aa~~a~~~AGi~~~Did~~elydc----F~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 295 RAAGRRALALAGLGIDDIDAFDLYSC----FPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEeccC----CHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHHH
Confidence 46999999999999999999865422 23344555678998643 23566665 4332 34454434444
Q ss_pred HhcCCCCeEEEE
Q 009966 260 LQVTPDSYALVV 271 (521)
Q Consensus 260 L~s~~~~~aLVV 271 (521)
|+..+.+++||.
T Consensus 370 LRg~~~~~gLv~ 381 (498)
T PRK08257 370 LRANPGRRGLVT 381 (498)
T ss_pred HhhcCCCEEEEE
Confidence 444344555554
No 187
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=78.08 E-value=3.3 Score=44.31 Aligned_cols=91 Identities=24% Similarity=0.422 Sum_probs=55.7
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC--------ccchHHHHHHHHHHHHH
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGG--------MGCSAGLISIDLARRLL 260 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------mgCsg~l~AL~lA~~lL 260 (521)
..|++++|+++|++|+|||.+-++-. .+...-.-.+.||+.+ ..+|.+| .|++|.-..++++.+|-
T Consensus 292 ~~a~~~al~~agl~~~did~~ei~d~----f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~ 365 (391)
T PRK07661 292 IAAIPKALKLAGLELSDIGLFELNEA----FASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHEMK 365 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCCH----HHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999885411 1122223335677642 2334443 35666666666666665
Q ss_pred hcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEEEec
Q 009966 261 QVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAILLSN 306 (521)
Q Consensus 261 ~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvLLs~ 306 (521)
+.+ .++.| .+.|.-|..+.|+||++
T Consensus 366 ~~~-~~~g~--------------------~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 366 RRN-EQFGI--------------------VTMCIGGGMGAAGVFEL 390 (391)
T ss_pred hcC-CCeEE--------------------EEEccccChhhEEEEEe
Confidence 432 23322 23466677777777764
No 188
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=77.89 E-value=8 Score=41.46 Aligned_cols=52 Identities=8% Similarity=-0.040 Sum_probs=31.5
Q ss_pred ccccCEEEecccCHHHHHHH--HHHcCCCcccccchhhcccCccccccchHHHHHHH
Q 009966 404 KLAFEHFCIHAGGRAVLDEV--EKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAY 458 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v--~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~ 458 (521)
++|||.+=+|-.- -+..+ .+.|+++..++.+ .-..--+||.-.++=...+.+
T Consensus 307 p~DID~~ei~daf--a~~~l~~~~~l~~~~~~vN~-sGg~~a~GHplgAtG~~~~~~ 360 (392)
T PRK06633 307 VNDLEVIEVNEAF--AAQSIYVNREMKWDMEKVNI-NGGAIAIGHPIGASGGRVLIT 360 (392)
T ss_pred HHHcCeeehhhHH--HHHHHHHHhhhCCCccccCC-CCchHhhCCcHHHHHHHHHHH
Confidence 4789999888433 22233 5778877666643 223445799977774444433
No 189
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=77.20 E-value=15 Score=39.31 Aligned_cols=82 Identities=10% Similarity=0.007 Sum_probs=48.4
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHH---HHHHHHHHcCCCCCCCEEE-EEEeChH
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLW---YELAYFEAKGRIRKGDRTW-QIAFGSG 479 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~---~~La~~~~~g~lk~GD~Vl-liafGsG 479 (521)
++|||.+=+|-.-....-...+.||++.+++.+|=-.+ -+||-..+|=. .+|.+.++. +.|.+.+ .+..|.|
T Consensus 302 ~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~l-a~GHP~GatG~~~~~~l~~qL~~---~~~~~g~~~~c~~gg 377 (388)
T PRK06366 302 IDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAV-AIGHPIGNSGSRIIVTLINALKT---RHMKTGLATLCHGGG 377 (388)
T ss_pred HHHcceeeccchhHHHHHHHHHHhCCCCCccCCCCchh-hhCCCcCCCHHHHHHHHHHHHHh---cCCCeEEEEEecccC
Confidence 47999999998877777777899999988887643333 25666555433 344333332 2222332 2334444
Q ss_pred HHhhheeeEEe
Q 009966 480 FKCNSAVWRAL 490 (521)
Q Consensus 480 ~~~~s~v~r~~ 490 (521)
. -.+++++..
T Consensus 378 ~-g~a~~~e~~ 387 (388)
T PRK06366 378 G-AHTLTLEMV 387 (388)
T ss_pred h-hhEEEEEec
Confidence 3 345666653
No 190
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=77.08 E-value=14 Score=40.05 Aligned_cols=85 Identities=11% Similarity=-0.069 Sum_probs=47.1
Q ss_pred ccccCEEEecccCHHHHHHHHHHcC-----------------CCcccccchhhcccCccccccchHHHHHHHHHHcCCCC
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLK-----------------LNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIR 466 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lg-----------------l~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk 466 (521)
.+|||.+-+|-.-....-...+.|+ ++.+.+.++=- +--+||...++-...+.++..+=+=+
T Consensus 326 ~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG-~la~GhP~gasG~~~~~e~~~qLrg~ 404 (428)
T PRK08963 326 LADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGG-SIAYGHPFAATGARMITQTLHELRRR 404 (428)
T ss_pred HHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCC-HHhcCCCccccHHHHHHHHHHHHhhc
Confidence 4799999999876544333334442 33334432211 22378877666655555554432225
Q ss_pred CCCEEEEEEeChHHHhhheeeEE
Q 009966 467 KGDRTWQIAFGSGFKCNSAVWRA 489 (521)
Q Consensus 467 ~GD~VlliafGsG~~~~s~v~r~ 489 (521)
.|++.+...-+.|-...+++++.
T Consensus 405 ~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 405 GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred CCCEEEEEEccccChhhEEEEEe
Confidence 67777665555554556666653
No 191
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=75.30 E-value=18 Score=38.59 Aligned_cols=84 Identities=8% Similarity=-0.146 Sum_probs=45.7
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCc---ccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHH
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNE---WLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGF 480 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~---e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~ 480 (521)
.+|||.+=+|-.-....-...+.||+-+ +.+.++-- +--+||...++=.....++..+-+-+.+.+.+.-..|.|-
T Consensus 299 ~~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~GG-~la~GhP~GAtG~~~v~~l~~~L~~~~~~~gl~~~~~g~G 377 (387)
T PRK08947 299 ISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGG-AIALGHPLGCSGARISTTLLNLMERKDAQFGLATMCIGLG 377 (387)
T ss_pred HHHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCCCc-hhhcCCCccccHHHHHHHHHHHHHhcCCCEEEEEEeeccc
Confidence 4799999999988777777788999843 45543222 3336777555544333333332111333344443344232
Q ss_pred HhhheeeE
Q 009966 481 KCNSAVWR 488 (521)
Q Consensus 481 ~~~s~v~r 488 (521)
...+++++
T Consensus 378 ~g~a~~~e 385 (387)
T PRK08947 378 QGIATVFE 385 (387)
T ss_pred ceeEEEEE
Confidence 23444444
No 192
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=75.12 E-value=6.7 Score=41.70 Aligned_cols=75 Identities=9% Similarity=0.100 Sum_probs=47.0
Q ss_pred HHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEecc-CCCCCCcHHHHHHHHcCCCCC-----------eeEEEecCccchH
Q 009966 181 MKETKAVIVGAIDELLAKTGVKPRDIGILLVNSS-LFNPTPSLSAMVVNHYKLRGN-----------ILSYNLGGMGCSA 248 (521)
Q Consensus 181 ~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~LGl~~~-----------~~~~dl~gmgCsg 248 (521)
.+.....+..+.+++|+++|++++|||.+++... +-....+. ..+.++++.+.+ ...=.+++++|++
T Consensus 200 ~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas 278 (379)
T TIGR01835 200 NEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGS 278 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHH
Confidence 3345556678899999999999999999887652 11112222 234455655421 1123677778888
Q ss_pred HHHHHHHH
Q 009966 249 GLISIDLA 256 (521)
Q Consensus 249 ~l~AL~lA 256 (521)
...+|.-+
T Consensus 279 ~~l~L~~~ 286 (379)
T TIGR01835 279 LYLGLASL 286 (379)
T ss_pred HHHHHHHH
Confidence 77777544
No 193
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=73.85 E-value=4.8 Score=40.78 Aligned_cols=40 Identities=23% Similarity=0.269 Sum_probs=30.9
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC
Q 009966 180 AMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP 220 (521)
Q Consensus 180 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P 220 (521)
.|.+++.+ ...++++|+++|++++|||.+.++..|+..++
T Consensus 26 ~r~H~~~L-~~~i~~~l~~~~~~~~did~iavt~GPGsftg 65 (268)
T PF00814_consen 26 SRQHSENL-PPLIEELLKEAGISLSDIDAIAVTRGPGSFTG 65 (268)
T ss_dssp HHHHHHHH-HHHHHHHHHHHTS-GGGESEEEEEEESS-HHH
T ss_pred HHHHHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCCcccc
Confidence 45555555 48999999999999999999999998865443
No 194
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=73.46 E-value=9.6 Score=37.51 Aligned_cols=55 Identities=22% Similarity=0.227 Sum_probs=41.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC-cHHHHHHHHcCCCCCeeEEEecC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTP-SLSAMVVNHYKLRGNILSYNLGG 243 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-s~a~~I~~~LGl~~~~~~~dl~g 243 (521)
...++++|.++|++++|||.|+|++.|+..+- -++.-++.-|.+.-+++.+.++.
T Consensus 42 ~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 42 MPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 67899999999999999999999998865443 33344444455555677888885
No 195
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=73.15 E-value=22 Score=37.73 Aligned_cols=57 Identities=11% Similarity=-0.147 Sum_probs=37.6
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcc------------------cccchhhcccCccccccchHHHHHHHHHH
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEW------------------LMEPSRMTLYRFGNTSSSCLWYELAYFEA 461 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e------------------~~~~S~~tl~r~GNtsSaSi~~~La~~~~ 461 (521)
++|||.+-+|-.....--...+.||+.+. .+.+|=- +--+||...++-...+.++..
T Consensus 274 ~~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG-~la~GhP~gatG~~~v~e~~~ 348 (385)
T PRK12578 274 PNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGG-LKAKGHPLGATGLSMIYEITK 348 (385)
T ss_pred HHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCC-cccCCCCccHHHHHHHHHHHH
Confidence 48999999999988777777889998762 2322111 223788776665555555443
No 196
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=73.08 E-value=27 Score=37.34 Aligned_cols=82 Identities=10% Similarity=-0.051 Sum_probs=47.2
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCc---ccccchhhcccCccccccch---HHHHHHHHHHcCCCCCCCEEEEEEeC
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNE---WLMEPSRMTLYRFGNTSSSC---LWYELAYFEAKGRIRKGDRTWQIAFG 477 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~---e~~~~S~~tl~r~GNtsSaS---i~~~La~~~~~g~lk~GD~VlliafG 477 (521)
++|||.+=+|-.-....-...+.||+-+ +.+.++-- +--+||...+| +...|.+.+.+ +.+.+.+....|
T Consensus 297 p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~GG-~la~GhP~GATG~r~v~~l~~~l~~---~~~~~Gl~~~~~ 372 (385)
T TIGR02445 297 ISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGG-AIALGHPLGCSGARISTTLLNLMEQ---KDATFGLATMCI 372 (385)
T ss_pred HHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCCc-hhhcCCCccccHHHHHHHHHHHHHh---cCCCeEEEEEec
Confidence 4799999999887777677778999843 45554332 22356664443 44444444432 334445444444
Q ss_pred hHHHhhheeeEE
Q 009966 478 SGFKCNSAVWRA 489 (521)
Q Consensus 478 sG~~~~s~v~r~ 489 (521)
.|-.-.+++++.
T Consensus 373 g~g~g~a~~~e~ 384 (385)
T TIGR02445 373 GLGQGIATVFER 384 (385)
T ss_pred ccChhheEEEEe
Confidence 343445566654
No 197
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=72.45 E-value=14 Score=36.30 Aligned_cols=101 Identities=19% Similarity=0.258 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC
Q 009966 141 TEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP 220 (521)
Q Consensus 141 ~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P 220 (521)
++++...++.+.++.|+.+.+..-... +.+..++....++++.+....+++++++-| -|+++.+|... -
T Consensus 118 t~rs~~il~~lv~~~g~s~~~~~vrst---dl~vL~l~~~~~~~~~~l~~~~~~a~~edg-----AeaIiLGCAGm---s 186 (230)
T COG4126 118 TERSRPILEELVRSYGLSRHCRSVRST---DLPVLALEGPPEEAEALLVIEAAEALKEDG-----AEAIILGCAGM---S 186 (230)
T ss_pred CcccHHHHHHHHHhcCccccccceeeC---CCCcccccCChHHHHHHHHHHHHHHhhhcC-----CCEEEEcCccH---H
Confidence 455555566677888888776532111 003345555567888888999998888654 68899998753 3
Q ss_pred cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 221 SLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 221 s~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
+++.+++..+|++ -+.| ...|+.+|-.+++.+
T Consensus 187 ~la~~Lq~~~gvP------VIDg-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 187 DLADQLQKAFGVP------VIDG-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHHhCCC------cccc-----hHHHHHHHHHHHhhc
Confidence 5689999999976 3444 566788888888765
No 198
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=72.24 E-value=12 Score=39.23 Aligned_cols=43 Identities=12% Similarity=0.125 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRG 234 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~ 234 (521)
...|++++|+++|++++|||++=++.. .+...-+..+.||+.+
T Consensus 253 ~~~a~~~al~~Agl~~~did~~ei~d~----F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 253 ARLAARRAYKMAGITPDDIDVAELYDC----FTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCC
Confidence 368999999999999999999876522 2233445566677764
No 199
>PRK09604 UGMP family protein; Validated
Probab=72.05 E-value=15 Score=38.38 Aligned_cols=49 Identities=20% Similarity=0.164 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC-----cHHHHHHHHcCCC
Q 009966 185 KAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP-----SLSAMVVNHYKLR 233 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~ 233 (521)
.+.+...++++|+++|++++|||.+.+++.|...+. +.+.-++..++.+
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~ip 105 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNKP 105 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCCC
Confidence 345578899999999999999999999988765333 3344555555543
No 200
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=69.49 E-value=1.3 Score=39.01 Aligned_cols=75 Identities=20% Similarity=0.248 Sum_probs=42.9
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCC---CeeEE----EecCccchHHHHHHHHHHHHH
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLRG---NILSY----NLGGMGCSAGLISIDLARRLL 260 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~---~~~~~----dl~gmgCsg~l~AL~lA~~lL 260 (521)
.++++++|+++|++|+|||.|... +.+..-.+.-+.-+.+-|+-.. .+..- .++....++++.+|-.+--.+
T Consensus 28 ~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~l 107 (119)
T PF02801_consen 28 ARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLAL 107 (119)
T ss_dssp HHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHHH
Confidence 688999999999999999999865 4433223334445555555321 12222 233345666776776666666
Q ss_pred hcC
Q 009966 261 QVT 263 (521)
Q Consensus 261 ~s~ 263 (521)
+.+
T Consensus 108 ~~~ 110 (119)
T PF02801_consen 108 EHG 110 (119)
T ss_dssp HHT
T ss_pred hcC
Confidence 654
No 201
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=69.03 E-value=21 Score=38.36 Aligned_cols=54 Identities=9% Similarity=-0.123 Sum_probs=32.5
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCc--ccccchhhcccCccccccchHHHHHHH
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNE--WLMEPSRMTLYRFGNTSSSCLWYELAY 458 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~--e~~~~S~~tl~r~GNtsSaSi~~~La~ 458 (521)
.+|||.+=+|-.-....-...+.||+.. ..+.++-- +--+||...++=...+.+
T Consensus 313 ~~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~GG-~la~GhP~gAtG~~~~~e 368 (401)
T PRK08131 313 LDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGG-AIAVGHPLGASGARLALT 368 (401)
T ss_pred HHHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCCcc-HHhcCCchhhhHHHHHHH
Confidence 4789999998766544444678899853 34433221 223788876554444443
No 202
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=68.80 E-value=18 Score=35.89 Aligned_cols=106 Identities=23% Similarity=0.260 Sum_probs=63.9
Q ss_pred EEeC-CCCCCCCCCCchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC-cHHHHHHHHcCCCCCee
Q 009966 160 MSGG-PKSLFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP-SLSAMVVNHYKLRGNIL 237 (521)
Q Consensus 160 r~~~-~~~~~~~p~~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-s~a~~I~~~LGl~~~~~ 237 (521)
++|. ||++...| .+-| ++-...+..-++.+|++++++++|||.+-+.-.|+.-.| +..+.+++-+.+=-+.+
T Consensus 30 ~TYitPPG~GFlP---~~TA---~HHr~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kP 103 (336)
T KOG2708|consen 30 HTYITPPGEGFLP---RDTA---RHHRAWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKP 103 (336)
T ss_pred ccccCCCCCCCCc---chhH---HHHHHHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCC
Confidence 4455 56665544 1111 233455677888999999999999999988878876666 33444555454322455
Q ss_pred EEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCC
Q 009966 238 SYNLGGMGCSAGLISIDLARRLLQVTPDSYALVVSTENIT 277 (521)
Q Consensus 238 ~~dl~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s 277 (521)
-..++ -|-|- |.+.+. +.-..+-.+|-||+-+..
T Consensus 104 lv~VN--HCigH---IEMGR~-iTgA~nPvvLYvSGGNTQ 137 (336)
T KOG2708|consen 104 LVGVN--HCIGH---IEMGRE-ITGAQNPVVLYVSGGNTQ 137 (336)
T ss_pred cccch--hhhhh---hhhcce-eccCCCCEEEEEeCCceE
Confidence 55555 56553 333332 222246778888877643
No 203
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=68.24 E-value=17 Score=37.50 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP 220 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P 220 (521)
+.+...++++|+++|++++|||.+.++..|...+.
T Consensus 50 ~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tg 84 (305)
T TIGR00329 50 ENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGS 84 (305)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhh
Confidence 34467899999999999999999999998875433
No 204
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=67.76 E-value=25 Score=38.14 Aligned_cols=24 Identities=25% Similarity=0.430 Sum_probs=22.0
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN 212 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ 212 (521)
..|++++++++|++|+|||++=++
T Consensus 312 ~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 312 AYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec
Confidence 569999999999999999999776
No 205
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=67.61 E-value=21 Score=38.03 Aligned_cols=74 Identities=19% Similarity=0.167 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCC---CeeEEEecCccchHHHHHHHHHHHHHhcC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLRG---NILSYNLGGMGCSAGLISIDLARRLLQVT 263 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~---~~~~~dl~gmgCsg~l~AL~lA~~lL~s~ 263 (521)
.++++++|+++|++|+|||.+... +.+..-.+.-...|.+.+|-+. ..++ .++...+++++..+..+...|+.+
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~-~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKG-LTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCc-ccccChhhcchHHHHHHHHHHhcC
Confidence 579999999999999999998755 4443223444455666666321 1111 233344555555555554455544
No 206
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=66.79 E-value=6.3 Score=38.51 Aligned_cols=41 Identities=22% Similarity=0.286 Sum_probs=28.8
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhhh
Q 009966 444 FGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCNS 484 (521)
Q Consensus 444 ~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~s 484 (521)
.|+-++.|.|...+.+++.=.+++||+|+=+|-|+|+....
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAl 89 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAAL 89 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHH
Confidence 45556677788888888877899999999999999987543
No 207
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=66.25 E-value=17 Score=38.71 Aligned_cols=75 Identities=13% Similarity=0.135 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC-CCeeE----EEecCccchHHHHHHHHHHHHHhc
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLR-GNILS----YNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~-~~~~~----~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
..|++++|+++|++|+|||.+-.. +.+..-.+.-..-+..-+|-. .++.. -.++...+++++..+-.+.-.|+.
T Consensus 279 ~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~ 358 (411)
T PRK07314 279 ARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRD 358 (411)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhC
Confidence 579999999999999999998754 544333444444566666632 12211 122322344444444444445554
Q ss_pred C
Q 009966 263 T 263 (521)
Q Consensus 263 ~ 263 (521)
+
T Consensus 359 ~ 359 (411)
T PRK07314 359 Q 359 (411)
T ss_pred C
Confidence 4
No 208
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=66.20 E-value=19 Score=38.34 Aligned_cols=40 Identities=18% Similarity=0.274 Sum_probs=29.6
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLR 233 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 233 (521)
..|++++++++|++|+|||.+-.. +.+ ...-+..+.||+.
T Consensus 261 ~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl~ 301 (389)
T PRK06064 261 VVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCCC
Confidence 579999999999999999998655 332 1334556677763
No 209
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=65.79 E-value=11 Score=36.32 Aligned_cols=35 Identities=26% Similarity=0.360 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP 220 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P 220 (521)
+.+...++++|+++|++++|||.+.++..|+..+.
T Consensus 35 ~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTG 69 (202)
T TIGR03725 35 EILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTG 69 (202)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHh
Confidence 34467999999999999999999999988865544
No 210
>PRK14878 UGMP family protein; Provisional
Probab=65.58 E-value=12 Score=39.10 Aligned_cols=53 Identities=15% Similarity=0.157 Sum_probs=38.7
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC-----cHHHHHHHHcCCC
Q 009966 180 AMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP-----SLSAMVVNHYKLR 233 (521)
Q Consensus 180 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~ 233 (521)
+|.+.+.+. .+++++|+++|++++|||.+.++..|...+. +.+..++..++.+
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~p 98 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNKP 98 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCCC
Confidence 456666655 9999999999999999999999988764433 2244455555543
No 211
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=65.14 E-value=10 Score=40.08 Aligned_cols=75 Identities=17% Similarity=0.141 Sum_probs=48.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC-CCee----EEEecCccchHHHHHHHHHHHHHhc
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLR-GNIL----SYNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~-~~~~----~~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
.++++++|+++|++++|||.+... +++..-.+.-+..+..-++-+ +.+. .-.++...+++|+..+-.+...|+.
T Consensus 278 ~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~ 357 (406)
T cd00834 278 ARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRD 357 (406)
T ss_pred HHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhc
Confidence 679999999999999999999866 544333444444555555542 0111 1123334667777777777777776
Q ss_pred C
Q 009966 263 T 263 (521)
Q Consensus 263 ~ 263 (521)
+
T Consensus 358 ~ 358 (406)
T cd00834 358 G 358 (406)
T ss_pred C
Confidence 5
No 212
>PRK00768 nadE NAD synthetase; Reviewed
Probab=64.12 E-value=1.5e+02 Score=30.18 Aligned_cols=151 Identities=15% Similarity=0.173 Sum_probs=76.8
Q ss_pred hHHHHHHHhhcCCCCHHH-----HHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHHHHHHHHHHHHHcCC
Q 009966 127 AERLFRMAAKNGYFTEES-----LAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGV 201 (521)
Q Consensus 127 ~~~~~e~~~~~~~~~~~~-----~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l~~~Aa~~aL~~agi 201 (521)
++++++.++....++.+. .+|++.-++++|...--+--.+- -.+.+. ..-+.+++..-+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~l~~~g~~g~VlGlSGG-----IDSav~----------a~L~~~A~~~~~~ 67 (268)
T PRK00768 3 QQEIIAELGVKPTIDPEEEIRRRVDFLKDYLKKSGLKSLVLGISGG-----QDSTLA----------GRLAQLAVEELRA 67 (268)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEECCCC-----HHHHHH----------HHHHHHHHHHhcc
Confidence 456666665443444332 46777777788855443322221 233333 2223344443332
Q ss_pred CCCCcCEEEEe-ccCCC--CCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHH--------HHH-----------H
Q 009966 202 KPRDIGILLVN-SSLFN--PTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDL--------ARR-----------L 259 (521)
Q Consensus 202 ~p~dID~LI~~-ss~~~--~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~l--------A~~-----------l 259 (521)
+-...+..+++ +.|.. .....+..+++.+|+. +...+||.. -..++...+.. |.. +
T Consensus 68 ~~~~~~~~~~~l~mP~~~~~~~~da~~la~~lgi~-~~~~i~I~~-~~~~~~~~l~~~~~~~~~~a~~NiqARlRm~~Ly 145 (268)
T PRK00768 68 ETGDDDYQFIAVRLPYGVQADEDDAQDALAFIQPD-RVLTVNIKP-AVDASVAALEAAGIELSDFVKGNIKARERMIAQY 145 (268)
T ss_pred cccCcceeEEEEECCCCCcCCHHHHHHHHHhcCCC-eeEEEECHH-HHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 11111222222 44432 2346678899999984 478889884 66666554432 111 1
Q ss_pred HhcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceeeEE
Q 009966 260 LQVTPDSYALVVSTENITMNWYGGNDRSMLLTNCLFRLGGAAIL 303 (521)
Q Consensus 260 L~s~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaAvL 303 (521)
.-+ ...+.||++|.+.|.. +.|- .+.+|||++.+-
T Consensus 146 ~~A-n~~~~lvlgT~N~sE~-~~Gy-------~TkyGD~~~d~~ 180 (268)
T PRK00768 146 AIA-GATGGLVVGTDHAAEA-VTGF-------FTKFGDGGADIL 180 (268)
T ss_pred HHH-ccCCCEEEcCCcccHH-HhCc-------eeccCCccccch
Confidence 111 2345688888776641 1110 257788887763
No 213
>PRK07937 lipid-transfer protein; Provisional
Probab=62.62 E-value=53 Score=34.68 Aligned_cols=73 Identities=14% Similarity=-0.061 Sum_probs=47.6
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCc-ccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeCh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNE-WLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGS 478 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~-e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGs 478 (521)
++|||.+=+|-.-....-...+.||+.. ..+.+|=-.|. ||-..++=...+.++..+=+=+..++.+..+.|.
T Consensus 264 ~~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~--ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~~Gg 337 (352)
T PRK07937 264 AGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA--ANPMFAAGLERIGEAARHIWDGSARRALAHATSG 337 (352)
T ss_pred HHHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccchh--cCchhHHHHHHHHHHHHHHhccCCCEEEEecccc
Confidence 4799999999988777777889999954 46665555564 7766555555555554421112346666666664
No 214
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=62.34 E-value=15 Score=39.02 Aligned_cols=68 Identities=19% Similarity=0.175 Sum_probs=44.4
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCCC----------------eeEEEecC--------
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLRGN----------------ILSYNLGG-------- 243 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~----------------~~~~dl~g-------- 243 (521)
..|++++++++|++|+|||++-+. +. +...-+..+.||+.+. -..+|.+|
T Consensus 263 ~~a~~~a~~~agl~~~did~~e~~d~f-----~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp 337 (389)
T PRK07516 263 RRAWQRALAQAGVTLDDLSFVETHDCF-----TIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHP 337 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecCC-----CHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCC
Confidence 579999999999999999998765 32 2223444556665431 12345433
Q ss_pred ccchHHHHHHHHHHHHHh
Q 009966 244 MGCSAGLISIDLARRLLQ 261 (521)
Q Consensus 244 mgCsg~l~AL~lA~~lL~ 261 (521)
.||+|....+.++.+|.-
T Consensus 338 ~gasG~~~~~e~~~QL~g 355 (389)
T PRK07516 338 IGATGVSMHVLAAMQLTG 355 (389)
T ss_pred ccHHHHHHHHHHHHHhcC
Confidence 256677777777777764
No 215
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=61.96 E-value=16 Score=32.74 Aligned_cols=83 Identities=16% Similarity=0.081 Sum_probs=50.1
Q ss_pred ccccCEEEecccCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEE-EEeChHHHh
Q 009966 404 KLAFEHFCIHAGGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQ-IAFGSGFKC 482 (521)
Q Consensus 404 ~~did~f~~H~~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~Vll-iafGsG~~~ 482 (521)
.+|||.|=+|-.-....-...+.||++++++.++=-.+. +||...+|=...+.++..+-+-+.|++.+. +.-|.|. -
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la-~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~-g 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALA-LGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQ-G 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHH-H-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTE-E
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCccccccc-ccccccccccchhhhhHHHHHHhchhhhhHHhccccee-e
Confidence 489999999999988888899999999999976444444 788866665444443333211134666554 4444443 3
Q ss_pred hheeeE
Q 009966 483 NSAVWR 488 (521)
Q Consensus 483 ~s~v~r 488 (521)
.+++++
T Consensus 117 ~a~lle 122 (123)
T PF02803_consen 117 SAVLLE 122 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 345544
No 216
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=60.74 E-value=20 Score=38.35 Aligned_cols=69 Identities=19% Similarity=0.221 Sum_probs=44.9
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCC----------------eeEEEecC--------c
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGN----------------ILSYNLGG--------M 244 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~----------------~~~~dl~g--------m 244 (521)
..|++++|+++|++|+|||++-++-. .+...-+..+.||+.+. -..+|.+| .
T Consensus 272 ~~A~~~al~~Agi~~~DID~~Ei~d~----Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~ 347 (393)
T cd00826 272 IEAARKALEKAGLGIGDLDLIEAHDA----FAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPI 347 (393)
T ss_pred HHHHHHHHHHcCCCHHHcCeeehhhh----hHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCc
Confidence 68999999999999999998876521 12223344556665421 13455554 2
Q ss_pred cchHHHHHHHHHHHHHh
Q 009966 245 GCSAGLISIDLARRLLQ 261 (521)
Q Consensus 245 gCsg~l~AL~lA~~lL~ 261 (521)
||+|....++++++|-.
T Consensus 348 gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 348 GASGAAICAELCFELKG 364 (393)
T ss_pred cccHHHHHHHHHHHHhh
Confidence 56677777777777754
No 217
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=60.27 E-value=15 Score=39.06 Aligned_cols=76 Identities=20% Similarity=0.145 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC-CCeeEE----EecCccchHHHHHHHHHHHHHh
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLR-GNILSY----NLGGMGCSAGLISIDLARRLLQ 261 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~-~~~~~~----dl~gmgCsg~l~AL~lA~~lL~ 261 (521)
..+|++++|+++|++|+|||.+... +++..-.+.-+..+.+-+|-. ..+... .++....++++..+..+...|+
T Consensus 276 ~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~ 355 (407)
T cd00828 276 IARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLE 355 (407)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHh
Confidence 3789999999999999999998755 554333444444455445421 112111 2333344445545544544555
Q ss_pred cC
Q 009966 262 VT 263 (521)
Q Consensus 262 s~ 263 (521)
.+
T Consensus 356 ~~ 357 (407)
T cd00828 356 HG 357 (407)
T ss_pred cC
Confidence 43
No 218
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=59.87 E-value=22 Score=37.43 Aligned_cols=44 Identities=14% Similarity=0.116 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKL 232 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 232 (521)
..|++++|+++|++|+|||.+-.. |++..-.+.-...|.+-||-
T Consensus 209 ~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 209 YRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 789999999999999999987654 55544455556667777763
No 219
>PRK06059 lipid-transfer protein; Provisional
Probab=58.77 E-value=43 Score=35.76 Aligned_cols=24 Identities=25% Similarity=0.433 Sum_probs=21.5
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN 212 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ 212 (521)
..|++++++++|++|+|||++=+.
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~ 299 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVY 299 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeec
Confidence 468999999999999999998765
No 220
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=58.49 E-value=46 Score=36.14 Aligned_cols=17 Identities=24% Similarity=0.343 Sum_probs=14.6
Q ss_pred ccccccceeeEEEeccC
Q 009966 292 NCLFRLGGAAILLSNRS 308 (521)
Q Consensus 292 ~~lFgDGAaAvLLs~~~ 308 (521)
.|...|||+|+||.+.+
T Consensus 266 ~~~~~DGAaA~il~se~ 282 (430)
T TIGR02446 266 STPLTDGAAAVILMREG 282 (430)
T ss_pred cCCCCCceEEEEEecHH
Confidence 57889999999999754
No 221
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=58.45 E-value=16 Score=38.02 Aligned_cols=37 Identities=22% Similarity=0.140 Sum_probs=30.1
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCC
Q 009966 180 AMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFN 217 (521)
Q Consensus 180 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~ 217 (521)
+|.+++.+... ++++|+++|++++|||.|.++..|..
T Consensus 42 ~~~H~~~l~~~-i~~~l~~~~~~~~did~Iavt~gPg~ 78 (322)
T TIGR03722 42 AEHHAEVAPKL-IKEALEEAGVSLEDIDAVAFSQGPGL 78 (322)
T ss_pred HHHHHHHHHHH-HHHHHHHcCCCHHHCCEEEEecCCch
Confidence 45566665555 99999999999999999999987753
No 222
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.34 E-value=29 Score=37.26 Aligned_cols=44 Identities=11% Similarity=0.090 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKL 232 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 232 (521)
+.++.+++|+++|+ |+|||.|... |++..-...-+..|.+.++.
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCC
Confidence 36899999999999 8999998754 55443344445566666774
No 223
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=57.93 E-value=19 Score=38.08 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKL 232 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 232 (521)
..|++++|+++|++|+|||.+... +.+..-.+.-...+...+|-
T Consensus 278 ~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 278 ARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 689999999999999999998755 54443344445556666663
No 224
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=57.41 E-value=28 Score=37.47 Aligned_cols=44 Identities=7% Similarity=0.021 Sum_probs=31.6
Q ss_pred HHHHHHHHHH-cCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 009966 189 VGAIDELLAK-TGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKL 232 (521)
Q Consensus 189 ~~Aa~~aL~~-agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 232 (521)
.+|++++|++ +|++|+|||.+-.. |.+..-.+.-...+.+-+|-
T Consensus 286 ~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 286 RRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 6899999999 99999999998765 54433333333456666663
No 225
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=57.09 E-value=31 Score=36.78 Aligned_cols=44 Identities=18% Similarity=0.262 Sum_probs=30.4
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKL 232 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 232 (521)
..|++++|+++|++|+|||.+... +++..-...-...+..-+|.
T Consensus 282 ~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 282 ARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 679999999999999999999866 54332222333445555653
No 226
>PLN03170 chalcone synthase; Provisional
Probab=56.24 E-value=22 Score=38.17 Aligned_cols=71 Identities=15% Similarity=0.205 Sum_probs=49.5
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE------EEecCccchHHHHHHHHH
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS------YNLGGMGCSAGLISIDLA 256 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~gmgCsg~l~AL~lA 256 (521)
-+...+...++++|+++|++++|||..++.-. .+.+-..+..+||++++-.. -+.++|+.++.+.+|+-.
T Consensus 278 ~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 45666677889999999999999998775432 34455678888998754321 245666667777777665
Q ss_pred H
Q 009966 257 R 257 (521)
Q Consensus 257 ~ 257 (521)
.
T Consensus 354 ~ 354 (401)
T PLN03170 354 R 354 (401)
T ss_pred H
Confidence 4
No 227
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=56.01 E-value=38 Score=35.12 Aligned_cols=54 Identities=19% Similarity=0.132 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC-----cHHHHHHHHcCCCCCeeEEEecC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP-----SLSAMVVNHYKLRGNILSYNLGG 243 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~~~~~~~dl~g 243 (521)
+.+...++++|+++|++++|||.+.++..|...+. +.|--++..++ ++.+.++.
T Consensus 51 ~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 51 EAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 34578899999999999999999999998875433 23344444444 33445554
No 228
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=55.97 E-value=30 Score=36.44 Aligned_cols=49 Identities=18% Similarity=0.248 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC-----cHHHHHHHHcCCC
Q 009966 185 KAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP-----SLSAMVVNHYKLR 233 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~ 233 (521)
.+.+-++++++|+++|.+|+|+|++-|+..|+.+.+ +.|-.++.++..+
T Consensus 83 r~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 83 RENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 445578999999999999999999999888775543 3444555555443
No 229
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=55.77 E-value=54 Score=34.47 Aligned_cols=91 Identities=21% Similarity=0.135 Sum_probs=52.3
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC-cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHH
Q 009966 180 AMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP-SLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARR 258 (521)
Q Consensus 180 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-s~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~ 258 (521)
+|.+.+ .+...++++|+++|++.+|||+|-++..|+-..+ ......+..|.+.-+.+-+-++ -|-|=+.+-.+...
T Consensus 47 sr~H~e-~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a~~l~~~ 123 (342)
T COG0533 47 SRHHVE-NIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVN--HLEGHIEAARLETG 123 (342)
T ss_pred HHHHHH-HHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHHHHhccC
Confidence 444444 3468899999999999999999999888764322 1123333333333245566666 45443333222221
Q ss_pred HHhcCCCCeEEEEEeccC
Q 009966 259 LLQVTPDSYALVVSTENI 276 (521)
Q Consensus 259 lL~s~~~~~aLVVs~E~~ 276 (521)
. ...--+|+||+=..
T Consensus 124 ~---~~p~v~LlVSGGHT 138 (342)
T COG0533 124 L---AFPPVALLVSGGHT 138 (342)
T ss_pred C---CCCcEEEEEecCce
Confidence 1 12345677776553
No 230
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=55.65 E-value=30 Score=37.68 Aligned_cols=42 Identities=19% Similarity=0.274 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRG 234 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~ 234 (521)
..|++++++++|++|+|||++=++-. .+...-+..+.||+.+
T Consensus 312 ~~A~~~a~~~AGl~~~DiD~~Ei~da----Fa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 312 RAAAQKALSMAGVKPSDLQVAEVHDC----FTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHcCCCHHHCcEeeeccc----ChHHHHHHHHHcCCCC
Confidence 68999999999999999999876521 2223344556677653
No 231
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=54.94 E-value=21 Score=38.54 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYK 231 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 231 (521)
.+|.+.+|+++|++|+|||.+-.. ||+..-...-+..|..-+|
T Consensus 279 ~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 279 IRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred HHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 699999999999999999999854 7765555555555666666
No 232
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=54.86 E-value=21 Score=39.64 Aligned_cols=84 Identities=19% Similarity=0.175 Sum_probs=51.5
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC-----cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009966 180 AMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP-----SLSAMVVNHYKLRGNILSYNLGGMGCSAGLISID 254 (521)
Q Consensus 180 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~ 254 (521)
.+.+++.+. .+++++|+++|++++|||.|.|+..|+..+. +.|--++..+|.+ .+.++.+-|-+
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~~----~~~v~h~~aH~------ 113 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDVP----LIGVNHCVAHV------ 113 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCCC----eecccHHHHHH------
Confidence 466777666 9999999999999999999999988764322 2233455555544 34444333322
Q ss_pred HHHHHHhcCC-CCeEEEEEecc
Q 009966 255 LARRLLQVTP-DSYALVVSTEN 275 (521)
Q Consensus 255 lA~~lL~s~~-~~~aLVVs~E~ 275 (521)
+..++.++. ..-+|+|++-.
T Consensus 114 -~~a~~~~~~~~~l~l~vsGg~ 134 (535)
T PRK09605 114 -EIGRLTTGAEDPVTLYVSGGN 134 (535)
T ss_pred -HHhhhccCCCCCeEEEEecCC
Confidence 223333332 23566666653
No 233
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=53.39 E-value=25 Score=37.66 Aligned_cols=75 Identities=16% Similarity=0.230 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCCCeeEE----EecCccchHHHHHHHHHHHHHhc
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLRGNILSY----NLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~~~~~~----dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
..+|.+++|+++|++|+|||.|... |++..-.+.-+..|.+-||-. .+... .++...+++++..+..+...|+.
T Consensus 272 ~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~ 350 (399)
T cd00832 272 LARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALRD 350 (399)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHhC
Confidence 3689999999999999999988754 555444555555677777643 22211 22333455555555555555554
Q ss_pred C
Q 009966 263 T 263 (521)
Q Consensus 263 ~ 263 (521)
+
T Consensus 351 ~ 351 (399)
T cd00832 351 G 351 (399)
T ss_pred C
Confidence 4
No 234
>PRK07855 lipid-transfer protein; Provisional
Probab=52.89 E-value=46 Score=35.54 Aligned_cols=24 Identities=25% Similarity=0.365 Sum_probs=21.5
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN 212 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ 212 (521)
..|++++++++|++|+|||++=+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 479999999999999999998655
No 235
>PRK06158 thiolase; Provisional
Probab=52.36 E-value=42 Score=35.75 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=21.5
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN 212 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ 212 (521)
..|++++++++|++|+|||.+=+.
T Consensus 257 ~~aa~~A~~~AGi~p~DId~~Ely 280 (384)
T PRK06158 257 AESGPRAFAMAGLTPADIDVVELY 280 (384)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 579999999999999999998654
No 236
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.10 E-value=31 Score=37.21 Aligned_cols=44 Identities=20% Similarity=0.251 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYK 231 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 231 (521)
..++++++|+++|++|+|||.+... +++....+.-..-|...+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 3689999999999999999999865 4443333333444555555
No 237
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=51.10 E-value=33 Score=38.46 Aligned_cols=44 Identities=16% Similarity=0.214 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKL 232 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 232 (521)
..|.+++|+++|++|+|||.|-.. |++..-.+.-...|.+-||-
T Consensus 408 ~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 408 ILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 689999999999999999988744 55433334444556666763
No 238
>PLN03173 chalcone synthase; Provisional
Probab=51.03 E-value=33 Score=36.78 Aligned_cols=72 Identities=15% Similarity=0.219 Sum_probs=48.3
Q ss_pred HHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE-----E-EecCccchHHHHHHHH
Q 009966 182 KETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS-----Y-NLGGMGCSAGLISIDL 255 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~gmgCsg~l~AL~l 255 (521)
+-+...+-..++++|+++|++++|||.+++... .+..-..++++||++++-.. + +.++|+.++.+.+|+-
T Consensus 273 ~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqg----g~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~ 348 (391)
T PLN03173 273 GLISKNVEKSLTEAFKPLGISDWNSLFWIAHPG----GPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDE 348 (391)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCeEEECCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 345666777889999999999999999775532 33455678899999754322 2 3444555555555555
Q ss_pred HH
Q 009966 256 AR 257 (521)
Q Consensus 256 A~ 257 (521)
+.
T Consensus 349 ~~ 350 (391)
T PLN03173 349 MR 350 (391)
T ss_pred HH
Confidence 44
No 239
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=50.78 E-value=69 Score=34.65 Aligned_cols=17 Identities=18% Similarity=0.268 Sum_probs=14.7
Q ss_pred ccccccceeeEEEeccC
Q 009966 292 NCLFRLGGAAILLSNRS 308 (521)
Q Consensus 292 ~~lFgDGAaAvLLs~~~ 308 (521)
.|..+|||+|+||++.+
T Consensus 263 ~s~~~DGAaA~vl~s~e 279 (426)
T PRK08170 263 SSQITDGACWLLLASEE 279 (426)
T ss_pred cCCCCCceEEEEEecHH
Confidence 47889999999999764
No 240
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=49.69 E-value=27 Score=37.29 Aligned_cols=43 Identities=19% Similarity=0.366 Sum_probs=31.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYK 231 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 231 (521)
..|++++|+++|++|+|||.+-.. +++..-.+.-...|.+-+|
T Consensus 257 ~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 257 IAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 789999999999999999998754 5543333433445555565
No 241
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=49.49 E-value=77 Score=33.79 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=27.4
Q ss_pred HHHHHHHHHHcCCC--CCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 009966 189 VGAIDELLAKTGVK--PRDIGILLVN-SSLFNPTPSLSAMVVNHYKLR 233 (521)
Q Consensus 189 ~~Aa~~aL~~agi~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 233 (521)
..|++++++++|++ ++|||++=+. |. +...-+....||+.
T Consensus 258 ~~a~~~a~~~Agi~~p~~Did~~el~d~F-----~~~~~~~~e~lGl~ 300 (386)
T PRK08313 258 RDAAAALWKAAGITDPRDEIDVAEIYVPF-----SWFEPMWLENLGFA 300 (386)
T ss_pred HHHHHHHHHHcCCCCChhhCCEEEeccCC-----hHHHHHHHHHcCCC
Confidence 57999999999997 6999988654 32 22223344556654
No 242
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=48.76 E-value=49 Score=35.42 Aligned_cols=43 Identities=16% Similarity=0.130 Sum_probs=31.8
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYK 231 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 231 (521)
.+|++++|+++|++|+|||.+-.. |.+..-.+.-...+...||
T Consensus 291 ~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 291 RRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 689999999999999999998754 5443333444556667776
No 243
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=48.24 E-value=71 Score=34.17 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=30.0
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLR 233 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 233 (521)
..|++++++++|++|+|||++-+. +. +...-+..+.||+.
T Consensus 279 ~~aa~~a~~~Agi~~~Didv~el~D~f-----a~~~l~~le~lGl~ 319 (403)
T PRK06289 279 RQAVLDAYRRAGVGLDDLDGFEVHDCF-----TPSEYLAIDHIGLT 319 (403)
T ss_pred HHHHHHHHHHcCCCHHHCeEEeeeccc-----hHHHHHHHHHcCCC
Confidence 579999999999999999998765 32 22334555667765
No 244
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=47.45 E-value=74 Score=34.54 Aligned_cols=24 Identities=17% Similarity=0.271 Sum_probs=21.4
Q ss_pred HHHHHHHHHHcCCC--CCCcCEEEEe
Q 009966 189 VGAIDELLAKTGVK--PRDIGILLVN 212 (521)
Q Consensus 189 ~~Aa~~aL~~agi~--p~dID~LI~~ 212 (521)
..|++++++++|++ ++|||++=+.
T Consensus 296 ~~a~~~a~~~AGl~~~~~DiD~~Ei~ 321 (430)
T PRK06365 296 RMAAKEAYEMAGITDPLNDLDLIELH 321 (430)
T ss_pred HHHHHHHHHHcCCCCCHHHCCEEEee
Confidence 57999999999997 7999998765
No 245
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=46.67 E-value=38 Score=36.46 Aligned_cols=43 Identities=14% Similarity=0.099 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYK 231 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 231 (521)
..|++++|+++|++|+|||.+-.. |.+..-.+.-+.-|.+-||
T Consensus 281 ~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 281 ALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 678999999999999999998654 5554445555566666666
No 246
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=46.31 E-value=68 Score=33.87 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=28.8
Q ss_pred HHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCC
Q 009966 181 MKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFN 217 (521)
Q Consensus 181 ~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~ 217 (521)
|.+.+. +...++++|+++|++++|||.+.++..|..
T Consensus 47 r~H~~~-l~~~i~~~l~~a~~~~~did~Iavt~GPGl 82 (345)
T PTZ00340 47 QHHREH-ILSLVKEALEEAKITPSDISLICYTKGPGM 82 (345)
T ss_pred HHHHHH-HHHHHHHHHHHcCCCHHHCCEEEEecCCCc
Confidence 444443 467889999999999999999999988763
No 247
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=45.46 E-value=42 Score=35.54 Aligned_cols=76 Identities=20% Similarity=0.209 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC----CCeeEE----EecCccchHHHHHHHHHHH
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKLR----GNILSY----NLGGMGCSAGLISIDLARR 258 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~----~~~~~~----dl~gmgCsg~l~AL~lA~~ 258 (521)
...|++++|+++|++|+|||.+... +++..-.+.-...|..-++-. ..+... .++....++++..+-.+..
T Consensus 281 ~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~ 360 (421)
T cd00833 281 QAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVL 360 (421)
T ss_pred HHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHH
Confidence 3689999999999999999999865 443222233333444444321 011111 2333334455555555555
Q ss_pred HHhcC
Q 009966 259 LLQVT 263 (521)
Q Consensus 259 lL~s~ 263 (521)
.|+.+
T Consensus 361 ~l~~~ 365 (421)
T cd00833 361 ALEHG 365 (421)
T ss_pred HHhcC
Confidence 55554
No 248
>PLN03172 chalcone synthase family protein; Provisional
Probab=44.82 E-value=43 Score=35.92 Aligned_cols=70 Identities=17% Similarity=0.211 Sum_probs=48.1
Q ss_pred HhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeE------EEecCccchHHHHHHHHH
Q 009966 183 ETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILS------YNLGGMGCSAGLISIDLA 256 (521)
Q Consensus 183 ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~gmgCsg~l~AL~lA 256 (521)
.+...+...++++|+++|++..|||..++... .+..-..|..+||++++-.. -+.++|+.++.+.+|+-+
T Consensus 274 ~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqg----g~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 274 LISKNIEKSLVEAFAPIGINDWNSIFWIAHPG----GPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHHhhhcCCCccccceEEecCC----cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 44556667788999999999999998775432 33455678899999754322 144566667777777654
No 249
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=44.80 E-value=62 Score=28.75 Aligned_cols=53 Identities=13% Similarity=0.168 Sum_probs=35.8
Q ss_pred HHHHHHHHHcCCCCCCcCEEEEeccCC--CCCCcHHHHHHHHcCCCCCeeEEEecCcc
Q 009966 190 GAIDELLAKTGVKPRDIGILLVNSSLF--NPTPSLSAMVVNHYKLRGNILSYNLGGMG 245 (521)
Q Consensus 190 ~Aa~~aL~~agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~gmg 245 (521)
+-.++.+++.+++++||--++++.++| ...|+ ..+.++|.-.+++-++...|.
T Consensus 24 eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~~~~~Vplmc~qE~~ 78 (117)
T cd02185 24 ELLEEIIERNNIKPEDIISVIFTVTPDLDAAFPA---KAARELGGWKYVPLMCAQEMD 78 (117)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEeCCcccccChH---HHHHhcCCCCCcceeecCcCC
Confidence 344566778999999999999997765 45674 455566433367666665533
No 250
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=44.69 E-value=34 Score=36.70 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYK 231 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 231 (521)
..+++++|+++|++|+|||.+... |++..-.+.-+..|..-||
T Consensus 278 ~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 278 QIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 689999999999999999999754 5554445555667777777
No 251
>PLN03171 chalcone synthase-like protein; Provisional
Probab=41.94 E-value=72 Score=34.22 Aligned_cols=71 Identities=17% Similarity=0.140 Sum_probs=45.0
Q ss_pred HHhHHHHHHHHHHHHHH---------cCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCee------EEEecCccc
Q 009966 182 KETKAVIVGAIDELLAK---------TGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNIL------SYNLGGMGC 246 (521)
Q Consensus 182 ~ea~~l~~~Aa~~aL~~---------agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~------~~dl~gmgC 246 (521)
++...++.+++++++++ .|++++||+.+++ +. .+.+-..+..+||++++-. --+.+++++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~H---q~--~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVH---PG--SSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEEc---CC--cHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 44445555566666665 5888899987642 21 2255678899999975432 125666777
Q ss_pred hHHHHHHHHHH
Q 009966 247 SAGLISIDLAR 257 (521)
Q Consensus 247 sg~l~AL~lA~ 257 (521)
++...+|+-+.
T Consensus 350 aSip~~L~~~~ 360 (399)
T PLN03171 350 ATVIFALDELR 360 (399)
T ss_pred hhHHHHHHHHH
Confidence 77777777554
No 252
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=41.86 E-value=65 Score=28.64 Aligned_cols=52 Identities=10% Similarity=0.149 Sum_probs=37.0
Q ss_pred HHHHHHHHHcCCCCCCcCEEEEeccCC--CCCCcHHHHHHHHc-CCCCCeeEEEecCcc
Q 009966 190 GAIDELLAKTGVKPRDIGILLVNSSLF--NPTPSLSAMVVNHY-KLRGNILSYNLGGMG 245 (521)
Q Consensus 190 ~Aa~~aL~~agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~L-Gl~~~~~~~dl~gmg 245 (521)
+-.++.+++.+++++||--++++.++| ...|+ ..+.++ |+. +++-++...|.
T Consensus 24 eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~-~Vplmc~qEm~ 78 (117)
T TIGR01796 24 ELLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWT-DVPVMCAQEIP 78 (117)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCC-CcceeccCcCC
Confidence 344566778999999999999997765 45674 445566 887 67766666543
No 253
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=40.63 E-value=54 Score=35.36 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcCC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYKL 232 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl 232 (521)
.++++++|+++|++|+|||.+-.. |++..-.+.-+..|..-||-
T Consensus 289 ~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 289 GHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 689999999999999999998744 55544455556667777773
No 254
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=40.61 E-value=80 Score=33.64 Aligned_cols=60 Identities=18% Similarity=0.272 Sum_probs=46.0
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCc--------HHHHHHHHcCCC
Q 009966 174 NKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPS--------LSAMVVNHYKLR 233 (521)
Q Consensus 174 ~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps--------~a~~I~~~LGl~ 233 (521)
..++.....+--.+..+|++++++++|+++++||+|=....+-+..|. -.+.|+++.|++
T Consensus 59 ~~~l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~ 126 (365)
T PRK09585 59 LERLAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGIT 126 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcC
Confidence 346777777888889999999999999999999988766444333332 367788888876
No 255
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=40.47 E-value=66 Score=28.67 Aligned_cols=51 Identities=14% Similarity=0.204 Sum_probs=31.7
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCC--CCCCcHHHHHHHHc-CCCCCeeEEEecC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLF--NPTPSLSAMVVNHY-KLRGNILSYNLGG 243 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~L-Gl~~~~~~~dl~g 243 (521)
.+-.++.+++.+++|+||--+++++++| ...|+.+. +++ |+. +++-+...-
T Consensus 23 ~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a~---R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 23 RELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAAA---RELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHHH---HHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHHH---HccCCCC-ccceeccCc
Confidence 3445566788999999999999998775 56776543 344 775 566555553
No 256
>PRK12404 stage V sporulation protein AD; Provisional
Probab=40.45 E-value=1.4e+02 Score=31.47 Aligned_cols=99 Identities=21% Similarity=0.261 Sum_probs=57.7
Q ss_pred CchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCC------C--eeEEEe---
Q 009966 173 DNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRG------N--ILSYNL--- 241 (521)
Q Consensus 173 ~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~------~--~~~~dl--- 241 (521)
+..+|..+.. .-++..+.+=|+++|.+|+|=|++|..-- ...--.+...+..+-|+.- | +.-||-
T Consensus 196 d~~nMGaaMA---PAA~dti~~h~~d~~~~~~~yDlI~TGDL-g~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~ 271 (334)
T PRK12404 196 DPFNMGGAMA---PAAVDTIEAHLRDRQIDASYYDLIVTGDL-GHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQP 271 (334)
T ss_pred Ccccchhhhh---HHHHHHHHHHHHHhCCChhhccEEEEcch-HHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCc
Confidence 3456663332 23466677788899999999999987621 1111223334444434320 1 233432
Q ss_pred -----cCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccC
Q 009966 242 -----GGMGCSAGLISIDLARRLLQVTPDSYALVVSTENI 276 (521)
Q Consensus 242 -----~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~ 276 (521)
+|-|||+.+..=.+-+. |+.+..+++|+|+|-.+
T Consensus 272 ~~aGgSGcgcsA~v~~g~~~~~-~~~g~~~rvL~v~TGAL 310 (334)
T PRK12404 272 VIAGASGPGCSATVTYGHLLNR-MKRGELKRILVVATGAL 310 (334)
T ss_pred ccCCCcccchHHHHHHHHHHHH-HhcCCceEEEEEEchhh
Confidence 34577776655444444 44577899999998764
No 257
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=40.10 E-value=1.1e+02 Score=32.89 Aligned_cols=40 Identities=13% Similarity=0.125 Sum_probs=27.9
Q ss_pred HHHHHHHHHHcCCC--CCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCC
Q 009966 189 VGAIDELLAKTGVK--PRDIGILLVN-SSLFNPTPSLSAMVVNHYKLR 233 (521)
Q Consensus 189 ~~Aa~~aL~~agi~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~ 233 (521)
..|++++++++|++ ++|||++-++ +- +...-+....||+.
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D~F-----t~~~l~~~e~lG~~ 301 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDDRY-----SYKELQHIEALRLS 301 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEecCC-----hHHHHHHHHHcCCC
Confidence 36999999999997 6999999776 32 12233444556654
No 258
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=39.57 E-value=1e+02 Score=32.94 Aligned_cols=24 Identities=25% Similarity=0.271 Sum_probs=21.2
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN 212 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ 212 (521)
..|++++++++|++|+|||++-+.
T Consensus 258 ~~aa~~a~~~AGi~~~did~~ely 281 (388)
T PRK08142 258 AWSGPAAFAEAGVTPADIKYASIY 281 (388)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEe
Confidence 579999999999999999987554
No 259
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=39.06 E-value=1.5e+02 Score=29.41 Aligned_cols=69 Identities=10% Similarity=0.109 Sum_probs=40.4
Q ss_pred cccccCEEEecc----cCHHHHHHHHHHcCCCcccccchhhcccCccccccchHHHHHHHHHHcCCCCCCCEEEEEEeC
Q 009966 403 FKLAFEHFCIHA----GGRAVLDEVEKHLKLNEWLMEPSRMTLYRFGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFG 477 (521)
Q Consensus 403 ~~~did~f~~H~----~~~~vi~~v~~~Lgl~~e~~~~S~~tl~r~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafG 477 (521)
..+||+|++.=. ....+--.+.+.|||+++-- |.-+.-.|--++.+.+-.-.++.+. .||.+|++++.-
T Consensus 118 ~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~---~p~a~VLvv~vE 190 (226)
T PF00195_consen 118 DPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA---NPGARVLVVCVE 190 (226)
T ss_dssp -GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH---STT-EEEEEEEE
T ss_pred CCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC---CccceEEEEEEE
Confidence 368999999532 23445558899999987533 4556666666655554333333332 589999998864
No 260
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=38.82 E-value=1.4e+02 Score=32.27 Aligned_cols=43 Identities=14% Similarity=0.201 Sum_probs=29.0
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccCCCCCCcHHHHHHHHcC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSLFNPTPSLSAMVVNHYK 231 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~LG 231 (521)
..|++++|+++|++|+|||.+-.. +.+..-.+.-...+..-+|
T Consensus 302 ~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 302 VLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 678999999999999999998755 4443223333333444444
No 261
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=38.73 E-value=1.4e+02 Score=31.89 Aligned_cols=41 Identities=10% Similarity=0.118 Sum_probs=28.6
Q ss_pred HHHHHHHHHHcCCC--CCCcCEEEEe-ccCCCCCCcHHHHHHHHcCCCC
Q 009966 189 VGAIDELLAKTGVK--PRDIGILLVN-SSLFNPTPSLSAMVVNHYKLRG 234 (521)
Q Consensus 189 ~~Aa~~aL~~agi~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~LGl~~ 234 (521)
..|++++++++|++ ++|||++=+. +- ....-+..+.||+.+
T Consensus 269 ~~aa~~a~~~AGl~~~~~Did~~Ei~D~F-----s~~~l~~~e~lGl~~ 312 (398)
T PRK06157 269 RIAARKAYREAGITDPREELSMAEVHDCF-----SITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHcCCCCchhcCCEEEEecCC-----hHHHHHHHHHcCCCC
Confidence 57999999999998 7999998655 32 222344455666653
No 262
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=37.07 E-value=75 Score=33.11 Aligned_cols=69 Identities=17% Similarity=0.222 Sum_probs=43.5
Q ss_pred HHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCC-------eeEEEecCccchHHHHHHHHHHHHHhc
Q 009966 190 GAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGN-------ILSYNLGGMGCSAGLISIDLARRLLQV 262 (521)
Q Consensus 190 ~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~-------~~~~dl~gmgCsg~l~AL~lA~~lL~s 262 (521)
-|+-.+|+++|+..+|||+.=.|-- .-|-+.+-.++||+.++ +.++.-- .||+|.=.-.-+-+.|=+.
T Consensus 324 vAIp~alk~aGL~v~did~FEINEA----FAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHP-lGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 324 VAIPKALKAAGLEVDDIDLFEINEA----FASQALYCRNKLGLDPEKVNVNGGAIALGHP-LGATGARCVATLLHEMKRR 398 (435)
T ss_pred hhhHHHHHHcCCcccccceeehhHH----HHHHHHHHHHHhCCCHHHcCCCCceeeccCC-cCCccHhHHHHHHHHHHhh
Confidence 3778899999999999998765521 22334556788888532 3444444 5788766555555555444
Q ss_pred C
Q 009966 263 T 263 (521)
Q Consensus 263 ~ 263 (521)
+
T Consensus 399 g 399 (435)
T KOG1389|consen 399 G 399 (435)
T ss_pred c
Confidence 3
No 263
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=33.73 E-value=64 Score=39.42 Aligned_cols=123 Identities=20% Similarity=0.257 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcC----EEEEecc-CC-----CCCC----------cHHHHHHHHcCCC--CCeeEEEecC
Q 009966 186 AVIVGAIDELLAKTGVKPRDIG----ILLVNSS-LF-----NPTP----------SLSAMVVNHYKLR--GNILSYNLGG 243 (521)
Q Consensus 186 ~l~~~Aa~~aL~~agi~p~dID----~LI~~ss-~~-----~~~P----------s~a~~I~~~LGl~--~~~~~~dl~g 243 (521)
.|..++.-+++-++||+|.|.. .+.+.|| +. ...| ..-+|.+||+... =.-++|.+.
T Consensus 89 RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~D- 167 (2376)
T KOG1202|consen 89 RLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVD- 167 (2376)
T ss_pred HHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhh-
Confidence 4568899999999999998753 2333332 11 1112 1236677775421 124566777
Q ss_pred ccchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCC-----CC-----CC--CCCcc--ccccccccccceeeEEEeccCC
Q 009966 244 MGCSAGLISIDLARRLLQVTPDSYALVVSTENITM-----NW-----YG--GNDRS--MLLTNCLFRLGGAAILLSNRSS 309 (521)
Q Consensus 244 mgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~s~-----~~-----~~--~~dr~--~lv~~~lFgDGAaAvLLs~~~~ 309 (521)
.+|++.+.|++.|.+-++.+...+|+|-+.-.+-. .| .. |.-|. .--...-=.||.+|++|.++..
T Consensus 168 tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk~~ 247 (2376)
T KOG1202|consen 168 TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRKSL 247 (2376)
T ss_pred hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEehhHH
Confidence 59999999999999999999999999988776532 11 11 11110 0000123469999999988764
No 264
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=32.93 E-value=44 Score=32.77 Aligned_cols=38 Identities=29% Similarity=0.375 Sum_probs=29.1
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHHhh
Q 009966 444 FGNTSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFKCN 483 (521)
Q Consensus 444 ~GNtsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~~~ 483 (521)
+|-|-|. +...+.+.+.=.+++||+|+=||-|+||..+
T Consensus 51 ~gqtis~--P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aA 88 (209)
T COG2518 51 CGQTISA--PHMVARMLQLLELKPGDRVLEIGTGSGYQAA 88 (209)
T ss_pred CCceecC--cHHHHHHHHHhCCCCCCeEEEECCCchHHHH
Confidence 4555444 6666777777789999999999999998754
No 265
>PRK08304 stage V sporulation protein AD; Validated
Probab=32.75 E-value=1.8e+02 Score=30.61 Aligned_cols=99 Identities=21% Similarity=0.288 Sum_probs=58.4
Q ss_pred CchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCC--C---C--eeEEEe----
Q 009966 173 DNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLR--G---N--ILSYNL---- 241 (521)
Q Consensus 173 ~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~--~---~--~~~~dl---- 241 (521)
+..+|..+.. .-++..+.+=|+++|.+|+|=|++|..-- ....-.+...+..+-|+. . | +.-||.
T Consensus 198 d~~nmgaaMa---pAa~dti~~h~~d~~~~~~~yDli~tGDl-g~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~ 273 (337)
T PRK08304 198 DPNDMGAAMA---PAAADTIQQHFKDTGRSPEDYDLIVTGDL-GRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQD 273 (337)
T ss_pred Ccccchhhhh---HHHHHHHHHHHHHcCCChhhccEEEEcch-HHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCc
Confidence 4456664332 23456677778999999999999986621 111112333344333431 0 1 345552
Q ss_pred -----cCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccC
Q 009966 242 -----GGMGCSAGLISIDLARRLLQVTPDSYALVVSTENI 276 (521)
Q Consensus 242 -----~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~ 276 (521)
+|-|||+.+..=.+=+. |+.+..+++|+|+|-.+
T Consensus 274 ~~aGgSGc~csa~v~~~~~~~~-~~~g~~~rvl~v~tGaL 312 (337)
T PRK08304 274 VFAGGSGCACSAVVTYGYLLKE-LQKGKLKRVLVVATGAL 312 (337)
T ss_pred ccCCCcccchhHHHHHHHHHHH-HhcCCceEEEEEEchhh
Confidence 34578877665555444 44677899999998764
No 266
>KOG4490 consensus Translocon-associated complex TRAP, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.36 E-value=76 Score=29.20 Aligned_cols=18 Identities=33% Similarity=0.318 Sum_probs=12.4
Q ss_pred CccchhcccchHHhcccC
Q 009966 1 MASGKQQNLQNEKQQNLQ 18 (521)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~ 18 (521)
|++||++..|.|..--||
T Consensus 1 Mg~~k~~K~qsEEeLLLq 18 (183)
T KOG4490|consen 1 MGPKKLTKQQSEEELLLQ 18 (183)
T ss_pred CCCccccccccHHHHHHH
Confidence 788888877776654443
No 267
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=30.06 E-value=49 Score=33.62 Aligned_cols=28 Identities=25% Similarity=0.428 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEe
Q 009966 185 KAVIVGAIDELLAKTGVKPRDIGILLVN 212 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi~p~dID~LI~~ 212 (521)
-+|...|++++++++|+.|.||+.+=..
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEee
Confidence 3455899999999999999999988654
No 268
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=30.04 E-value=2.4e+02 Score=29.61 Aligned_cols=99 Identities=17% Similarity=0.240 Sum_probs=57.2
Q ss_pred CchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCC--C---C--eeEEEe----
Q 009966 173 DNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLR--G---N--ILSYNL---- 241 (521)
Q Consensus 173 ~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~--~---~--~~~~dl---- 241 (521)
+..+|..+.. .-++..+.+=|+++|.+|+|=|++|..-- ....-.+...+..+-|+. + | ..-||-
T Consensus 192 d~~nmgaama---paa~dti~~h~~d~~~~~~~yd~i~tgdl-g~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~ 267 (327)
T TIGR02845 192 DPLDMGAAMA---PAAADTIEAHFKDTGRSVDDYDLIVTGDL-ARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQV 267 (327)
T ss_pred Ccccchhhhh---HHHHHHHHHHHHHcCCChhhccEEEecch-HHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcc
Confidence 3456663332 23466677788899999999999987621 111112233333333331 0 1 233432
Q ss_pred ----cCccchHHHHHHHHHHHHHhcCCCCeEEEEEeccC
Q 009966 242 ----GGMGCSAGLISIDLARRLLQVTPDSYALVVSTENI 276 (521)
Q Consensus 242 ----~gmgCsg~l~AL~lA~~lL~s~~~~~aLVVs~E~~ 276 (521)
+|-|||+.+..=.+=+.| +.+..+++|+|+|-.+
T Consensus 268 ~aggsgc~csa~v~~~~~~~~~-~~g~~~r~l~v~tgal 305 (327)
T TIGR02845 268 FAGGSGCACSAVVTYGHILKEM-LRGKLKKVLVVATGAL 305 (327)
T ss_pred cCCCcccchhHHHHHHHHHHHH-hcCcceEEEEEEchhh
Confidence 345777766555554443 4577899999998764
No 269
>PRK13410 molecular chaperone DnaK; Provisional
Probab=27.65 E-value=1.9e+02 Score=33.38 Aligned_cols=77 Identities=14% Similarity=0.157 Sum_probs=49.9
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009966 175 KNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISID 254 (521)
Q Consensus 175 ~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~ 254 (521)
..+..-.+.-..-+...++++|+++|++++|||.|++.... ...|.+-.+|...+|... ..+++..-|.+.-.|+.
T Consensus 298 ~~FE~l~~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~~---~~~~npdeaVA~GAAi~ 373 (668)
T PRK13410 298 KQFESLCGDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPREP---NQNVNPDEVVAVGAAIQ 373 (668)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCCc---ccCCCCchHHHHhHHHH
Confidence 34443334444445667889999999999999998876422 248888899999888542 23344334555444544
Q ss_pred H
Q 009966 255 L 255 (521)
Q Consensus 255 l 255 (521)
.
T Consensus 374 a 374 (668)
T PRK13410 374 A 374 (668)
T ss_pred H
Confidence 3
No 270
>TIGR02435 CobG precorrin-3B synthase. An iron-sulfur protein. An oxygen atom from dioxygen is incorporated into the macrocycle at C-20. In the aerobic cobalamin biosythesis pathway, four enzymes are involved in the conversion of precorrin-3A to precorrin-6A. The first of the four steps is carried out by EC 1.14.13.83, precorrin-3B synthase (CobG), yielding precorrin-3B as the product. This is followed by three methylation reactions, which introduce a methyl group at C-17 (CobJ; EC 2.1.1.131), C-11 (CobM; EC 2.1.1.133) and C-1 (CobF; EC 2.1.1.152) of the macrocycle, giving rise to precorrin-4, precorrin-5 and precorrin-6A, respectively.
Probab=26.31 E-value=3.3e+02 Score=29.04 Aligned_cols=95 Identities=15% Similarity=0.113 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHHhCCccEEeCCCCCCCCCCCchhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEE--EEecc--CC
Q 009966 141 TEESLAFQKKVVERSGIGKMSGGPKSLFDNPLDNKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGIL--LVNSS--LF 216 (521)
Q Consensus 141 ~~~~~~f~~ki~~~sGi~~r~~~~~~~~~~p~~~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~L--I~~ss--~~ 216 (521)
+++.++.+..+.+..|.++-+..+.--...+ ....=. .+++.+.|++.|+....-+.. +++|. +.
T Consensus 269 ~~~~l~~la~ia~~~g~~~irlT~~Q~l~i~-~i~~~~----------~~~~~~~l~~~gl~~~~~~~~~~v~aC~G~~~ 337 (390)
T TIGR02435 269 TAAQLRGLAQLAQALGDGDLRLTPWRALLVL-GLPPER----------ADAAQRALAALGLVTSASDPRARIIACTGAPG 337 (390)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCcceEEc-CCCHHH----------HHHHHHHHHHCCCCcCCCCCeeeEEECCCccc
Confidence 3343444445667778777766654322222 111111 456677777888765433322 45553 23
Q ss_pred C-----CCCcHHHHHHHHcCCCCCeeEEEecCccchHH
Q 009966 217 N-----PTPSLSAMVVNHYKLRGNILSYNLGGMGCSAG 249 (521)
Q Consensus 217 ~-----~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~ 249 (521)
+ .+..++..|...++-... ..+.++ ||..+
T Consensus 338 C~~~~~~t~~~a~~l~~~~~~~~~-~~i~vS--GC~n~ 372 (390)
T TIGR02435 338 CASALADTRADAEALAAYCEPTAP-ITVHLS--GCAKG 372 (390)
T ss_pred cccchhhHHHHHHHHHHHhcccCC-cEEEEe--CCccc
Confidence 2 344667788888765422 556666 78653
No 271
>PRK08329 threonine synthase; Validated
Probab=25.18 E-value=65 Score=33.78 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=30.2
Q ss_pred cccchHHHHHHHHHHcCCCCCCCEEEEEEeChHHH
Q 009966 447 TSSSCLWYELAYFEAKGRIRKGDRTWQIAFGSGFK 481 (521)
Q Consensus 447 tsSaSi~~~La~~~~~g~lk~GD~VlliafGsG~~ 481 (521)
.+|+..+..+..+.++|.+++|++|+++--|+|+|
T Consensus 311 pssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 311 PTSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred ccHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 34777788888888899999999999999999976
No 272
>PF04241 DUF423: Protein of unknown function (DUF423); InterPro: IPR006696 This is a potential integral membrane protein with no known function.
Probab=24.31 E-value=4.1e+02 Score=22.11 Aligned_cols=27 Identities=30% Similarity=0.436 Sum_probs=19.4
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHH
Q 009966 32 SIKLKYVKLGYHYLISNALYLLLVPLL 58 (521)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (521)
....+....+-+|.+-|.+.++.++++
T Consensus 16 ~~~~~~~~tA~~y~~~Halall~~~~~ 42 (89)
T PF04241_consen 16 PEQLEWFQTAVQYQFIHALALLALGLL 42 (89)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334566777888988888887766643
No 273
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=23.84 E-value=1.5e+02 Score=31.52 Aligned_cols=68 Identities=16% Similarity=0.221 Sum_probs=48.5
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCC----------cHHHHHHHHcCCCC--CeeEEEec
Q 009966 175 KNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTP----------SLSAMVVNHYKLRG--NILSYNLG 242 (521)
Q Consensus 175 ~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P----------s~a~~I~~~LGl~~--~~~~~dl~ 242 (521)
..++..+++-..+-..|+..++++.++.|+||+.|.+...+-...| ....+|+++.|++. |.++=|+.
T Consensus 62 ~~~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a 141 (371)
T COG2377 62 AELAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMA 141 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhcccccc
Confidence 4566667778888899999999999999999997766533322222 24688999999872 33344554
No 274
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=23.59 E-value=1.5e+02 Score=31.65 Aligned_cols=27 Identities=22% Similarity=0.388 Sum_probs=22.7
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEe-ccC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVN-SSL 215 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~-ss~ 215 (521)
.++++++|+++|++|+|||.+-.. +.+
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~hgtgt 311 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPHGTGS 311 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccCCCC
Confidence 589999999999999999988754 443
No 275
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=23.45 E-value=79 Score=28.23 Aligned_cols=52 Identities=17% Similarity=0.295 Sum_probs=33.6
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEE-eChHHHhhheeeEEeccC--CCCC---CCCCccccccc
Q 009966 450 SCLWYELAYFEAKGRIRKGDRTWQIA-FGSGFKCNSAVWRALRTI--NPAH---EKNPWMDEIDN 508 (521)
Q Consensus 450 aSi~~~La~~~~~g~lk~GD~Vllia-fGsG~~~~s~v~r~~~~~--~~~~---~~~~w~~~i~~ 508 (521)
|.++++=+++.+- .++.||+|.+-+ || .+|+++-..- .+-- ..+||++++-+
T Consensus 31 a~~~inp~D~~~L-gv~EGD~VkVkse~G------eVVV~Ak~~~~~~pG~vfiPmgpWaN~vi~ 88 (128)
T COG1153 31 AVCEINPEDMKQL-GVSEGDKVKVKSEFG------EVVVKAKEADGVQPGMVFIPMGPWANVVID 88 (128)
T ss_pred eEEEECHHHHHHh-CCCcCCeEEEEecCc------cEEEEEeeCCCCCCCeEEecCCcccceeeC
Confidence 4455555666554 468999999987 87 5777765543 2210 16899998743
No 276
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=23.06 E-value=2.2e+02 Score=32.12 Aligned_cols=76 Identities=11% Similarity=0.124 Sum_probs=49.4
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009966 175 KNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISID 254 (521)
Q Consensus 175 ~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~ 254 (521)
.++....++-..=....++++|+++|+++++||.|++.... ...|.+-..|.+.+|.. + ..+++..-|.+.-.|+.
T Consensus 294 ~~fe~l~~~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGs-sriP~v~~~i~~~f~~~--~-~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 294 AKFEELTADLVERTKEPVRQALKDAGLSASDIDEVILVGGS-TRIPAVQELVKDFFGKE--P-NKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCc-ccChHHHHHHHHHhCCc--c-cCCcCcHHHHHHHHHHH
Confidence 34444334444445667789999999999999999976422 24888899999999843 2 23444445555444554
No 277
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=23.03 E-value=2.3e+02 Score=26.69 Aligned_cols=65 Identities=15% Similarity=0.169 Sum_probs=39.4
Q ss_pred CCcCEEEE-eccCCCCCC--cHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHHHHHHHhcCC---CCeEEEEEecc
Q 009966 204 RDIGILLV-NSSLFNPTP--SLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLARRLLQVTP---DSYALVVSTEN 275 (521)
Q Consensus 204 ~dID~LI~-~ss~~~~~P--s~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~lA~~lL~s~~---~~~aLVVs~E~ 275 (521)
+.|+++++ +.+.....| +-...+...|. .. .... |-.+.-.||..|.++++..+ .++++|+.++.
T Consensus 47 ~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~---~~--~~~~--G~t~l~~aL~~A~~~l~~~~~~~~~~iiil~sd~ 117 (183)
T cd01453 47 SQLGIISIKNGRAEKLTDLTGNPRKHIQALK---TA--RECS--GEPSLQNGLEMALESLKHMPSHGSREVLIIFSSL 117 (183)
T ss_pred ccEEEEEEcCCccEEEECCCCCHHHHHHHhh---cc--cCCC--CchhHHHHHHHHHHHHhcCCccCceEEEEEEcCC
Confidence 56999999 555443333 22334555543 12 1112 44678899999999997532 45678887764
No 278
>CHL00094 dnaK heat shock protein 70
Probab=22.30 E-value=2.7e+02 Score=31.70 Aligned_cols=45 Identities=11% Similarity=0.186 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCC
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLR 233 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~ 233 (521)
+...++++|+++|+++++||.|++.... ...|.+-.++.+.+|..
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 311 CRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 3455789999999999999999976432 35888999999999854
No 279
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=22.29 E-value=3.2e+02 Score=31.08 Aligned_cols=77 Identities=10% Similarity=0.077 Sum_probs=49.4
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHH
Q 009966 174 NKNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISI 253 (521)
Q Consensus 174 ~~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL 253 (521)
..++....++...=+...++++|+++|++++|||.|++.... ...|.+..+|.+.+|... . .+++..-|.+.-.|+
T Consensus 297 r~efe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~~-~--~~~npdeaVA~GAAi 372 (616)
T PRK05183 297 REQFNALIAPLVKRTLLACRRALRDAGVEADEVKEVVMVGGS-TRVPLVREAVGEFFGRTP-L--TSIDPDKVVAIGAAI 372 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCEEEEECCc-ccChHHHHHHHHHhccCc-C--cCCCchHHHHHHHHH
Confidence 344444334444445566789999999999999999976321 247888899999998642 2 244543444444444
Q ss_pred H
Q 009966 254 D 254 (521)
Q Consensus 254 ~ 254 (521)
.
T Consensus 373 ~ 373 (616)
T PRK05183 373 Q 373 (616)
T ss_pred H
Confidence 3
No 280
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=21.93 E-value=1e+02 Score=32.86 Aligned_cols=27 Identities=30% Similarity=0.421 Sum_probs=23.5
Q ss_pred HHHHHHHHHHcCCCCCCcCEEE-EeccC
Q 009966 189 VGAIDELLAKTGVKPRDIGILL-VNSSL 215 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI-~~ss~ 215 (521)
..|.+++|+++|+.|+|||.|= ++||+
T Consensus 304 ~~am~raL~~Agl~pe~i~YvNAHATST 331 (440)
T KOG1394|consen 304 VLAMERALKDAGLSPEDIDYVNAHATST 331 (440)
T ss_pred HHHHHHHHHHcCCChhhcCeeecccccC
Confidence 8899999999999999999886 45664
No 281
>PRK13411 molecular chaperone DnaK; Provisional
Probab=21.92 E-value=2.5e+02 Score=32.23 Aligned_cols=56 Identities=14% Similarity=0.302 Sum_probs=39.5
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCC
Q 009966 176 NMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKL 232 (521)
Q Consensus 176 ~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl 232 (521)
++....++-..=....++++|+++|+++++||.|++... ....|.+-.+|...+|-
T Consensus 298 ~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~id~ViLvGG-ssriP~v~~~l~~~f~~ 353 (653)
T PRK13411 298 KFEELTKDLVEATIEPMQQALKDAGLKPEDIDRVILVGG-STRIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECC-CCCcchHHHHHHHHcCC
Confidence 343333333333456778999999999999998887632 12488888999999874
No 282
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=21.02 E-value=1.2e+02 Score=30.88 Aligned_cols=49 Identities=35% Similarity=0.479 Sum_probs=34.2
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecC
Q 009966 189 VGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGG 243 (521)
Q Consensus 189 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 243 (521)
+.|++..|+++|++-+|||++=+|-. ..|. .-.+++.|+++ +.-.|++|
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEA---FApQ-~LAv~r~L~ld--~sKlNVNG 344 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEA---FAPQ-YLAVERSLDLD--ISKLNVNG 344 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechh---hchH-HHHHHHhhCCC--hhhccccC
Confidence 56888999999999999998887742 1121 23466777774 66667775
No 283
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=20.96 E-value=2.8e+02 Score=29.33 Aligned_cols=69 Identities=16% Similarity=0.223 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHcCC-CCCCcCEEEEeccCCCCCCcHHHHHHHH--cCCCCCeeEEEecCccchHHHHHHHHHHHH
Q 009966 185 KAVIVGAIDELLAKTGV-KPRDIGILLVNSSLFNPTPSLSAMVVNH--YKLRGNILSYNLGGMGCSAGLISIDLARRL 259 (521)
Q Consensus 185 ~~l~~~Aa~~aL~~agi-~p~dID~LI~~ss~~~~~Ps~a~~I~~~--LGl~~~~~~~dl~gmgCsg~l~AL~lA~~l 259 (521)
.+...+|++++++++|| +|.|+-.+-+=|- .++. ..|... =|-+ -+..--+..|+=|-+..||.+|-.|
T Consensus 131 V~~vA~aV~~aM~~AGI~dpaDVH~VQvKcP----LLT~-~~i~~A~~RG~~-~~t~dt~~SM~~SrgASALGvAvAL 202 (365)
T PF09663_consen 131 VEEVAAAVRAAMADAGITDPADVHFVQVKCP----LLTS-ERIADAKARGKT-VATEDTYESMAYSRGASALGVAVAL 202 (365)
T ss_pred HHHHHHHHHHHHHHcCCCChhheeeEEecCC----cCCH-HHHHHHHhCCCc-eeecccccccccccchhHHHHHHHh
Confidence 34447899999999999 8999877765553 3332 233322 2221 1212223335555566667777665
No 284
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=20.84 E-value=2.9e+02 Score=31.70 Aligned_cols=65 Identities=8% Similarity=0.187 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHHH
Q 009966 188 IVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDL 255 (521)
Q Consensus 188 ~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~l 255 (521)
....++++|+++++++++||.|++... ....|.+-.+|.+.+|-. ....+++..-|.+.-.|+..
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~i~~~f~~~--~~~~~~npdeaVA~GAa~~a 379 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGG-STRIPKVQSLIKDFFNGK--EPCKSINPDEAVAYGAAVQA 379 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECC-CCCChhHHHHHHHHhCCC--CCCCCCCcchHHhhhhhhhH
Confidence 345688999999999999999987632 135888889999998743 12223443345544444543
No 285
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=20.04 E-value=3.5e+02 Score=30.79 Aligned_cols=76 Identities=11% Similarity=0.124 Sum_probs=49.2
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHcCCCCCCcCEEEEeccCCCCCCcHHHHHHHHcCCCCCeeEEEecCccchHHHHHHH
Q 009966 175 KNMALAMKETKAVIVGAIDELLAKTGVKPRDIGILLVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISID 254 (521)
Q Consensus 175 ~~la~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~LGl~~~~~~~dl~gmgCsg~l~AL~ 254 (521)
.++....+.-..=+...++++|+++|+++++||.|++.... ...|.+-.+|.+.+|... ..+++..-|.+.-.|+.
T Consensus 296 ~~fe~l~~~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~fg~~~---~~~~npdeava~GAa~~ 371 (627)
T PRK00290 296 AKFEELTEDLVERTIEPCKQALKDAGLSVSDIDEVILVGGS-TRMPAVQELVKEFFGKEP---NKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-CCChHHHHHHHHHhCCCC---CcCcCChHHHHHhHHHH
Confidence 34443333333445567789999999999999999876422 248888999999998542 22444445555545554
Done!