BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009967
(521 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FIH2|PP414_ARATH Pentatricopeptide repeat-containing protein At5g42450,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E102 PE=2
SV=1
Length = 517
Score = 610 bits (1572), Expect = e-173, Method: Compositional matrix adjust.
Identities = 289/474 (60%), Positives = 369/474 (77%), Gaps = 7/474 (1%)
Query: 54 ESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGS 113
+SD + H+VFDE+P+L+V+SAT +IGRF K+ + EA F R+L L IRP+EFTFG+
Sbjct: 39 DSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGT 98
Query: 114 VIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPN 173
VI SST D+ LGKQLH +A K+GL SNVFVGSA+L+ Y+KLS++ +A R F+DT +PN
Sbjct: 99 VIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPN 158
Query: 174 VVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLR 233
VVS T +I G LK+ FE+AL LF+ MP R+VV+WNA+IGG+SQTGRNEEAVN F++MLR
Sbjct: 159 VVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLR 218
Query: 234 EGLV-PNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGK-LDVFVGNSLISFYAKCGSM 291
EG+V PN ST PCAI A +NIA+ G GKS HACA+KFLGK +VFV NSLISFY+KCG+M
Sbjct: 219 EGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 292 EDSLLVFDKLTE--RNIVTWNAVICGYAQNGRGEEAIEFFERM-RINGIRPNGVTLLGLL 348
EDSLL F+KL E RNIV+WN++I GYA NGRGEEA+ FE+M + +RPN VT+LG+L
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVL 338
Query: 349 WACNHTGLVEKGYSYFSQA--KLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFD 406
+ACNH GL+++GY YF++A +DP +L+ EHYACMVD+LSRSGRFKEA+E + +P D
Sbjct: 339 FACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 407 PGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIR 466
PGIGFWKALLGGCQIHSN L + AA +IL LDP DVSSYVMLSNA S W NVS IR
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIR 458
Query: 467 REMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIREFE 520
R+MKE G+ R GCSWIE++ ++ VFV D+N+ + DE+Y +L ++ + E E
Sbjct: 459 RKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEENE 512
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 4/159 (2%)
Query: 46 TDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIR 105
T+ +S + +F +F +P+ +VV+ +IG F++ EEA+ F ML +
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 106 -PSEFTFGSVIPSSTALEDLNLGKQLHAWATK-VGLQSNVFVGSAILDLYIKLSSIEEAT 163
P+E TF I + + + GK +HA A K +G + NVFV ++++ Y K ++E++
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 164 RVFE--DTHNPNVVSYTTMICGLLKRERFEDALKLFQEM 200
F + N+VS+ +MI G R E+A+ +F++M
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM 321
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 91/224 (40%), Gaps = 63/224 (28%)
Query: 153 YIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMI 212
+I I A +VF++ +V+S T A+I
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISAT-------------------------------AVI 65
Query: 213 GGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGK 272
G + + R+ EA F +L G+ PN T I ++ + +GK H A+K
Sbjct: 66 GRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLA 125
Query: 273 LDVFVGNSLISFYAKCGSMEDSLLVFDK-------------------------------L 301
+VFVG+++++ Y K ++ D+ FD +
Sbjct: 126 SNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAM 185
Query: 302 TERNIVTWNAVICGYAQNGRGEEAIE-FFERMRINGIRPNGVTL 344
ER++VTWNAVI G++Q GR EEA+ F + +R + PN T
Sbjct: 186 PERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTF 229
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/474 (38%), Positives = 287/474 (60%), Gaps = 11/474 (2%)
Query: 51 CGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFT 110
CG+ +D +VFDE+ D NVVS ++I F + EA+ +F ML + P E T
Sbjct: 200 CGNVND----AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 111 FGSVIPSSTALEDLNLGKQLHAWATKVG-LQSNVFVGSAILDLYIKLSSIEEATRVFEDT 169
SVI + +L + +G+++H K L++++ + +A +D+Y K S I+EA +F+
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 170 HNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFI 229
NV++ T+MI G + A +F +M RNVVSWNA+I GY+Q G NEEA++LF
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 230 EMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKL------DVFVGNSLIS 283
+ RE + P H + + A A++A L +G H +K K D+FVGNSLI
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 284 FYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVT 343
Y KCG +E+ LVF K+ ER+ V+WNA+I G+AQNG G EA+E F M +G +P+ +T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 344 LLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDL 403
++G+L AC H G VE+G YFS + +HY CMVDLL R+G +EAK + ++
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 404 PFDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVS 463
P P W +LL C++H N+ LG++ A ++L ++P + YV+LSN + GKW++V
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 464 NIRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIR 517
N+R+ M+++G+T+ PGCSWI+I+ HVF+ D++H +I+++L ++R
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 155/279 (55%), Gaps = 9/279 (3%)
Query: 128 KQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKR 187
+ +HA K G + +F+ + ++D Y K S+E+ +VF+ N+ ++ +++ GL K
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 188 ERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAI 247
++A LF+ MP R+ +WN+M+ G++Q R EEA+ F M +EG V N + +
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 248 IAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIV 307
A + + + G H+ K DV++G++L+ Y+KCG++ D+ VFD++ +RN+V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 308 TWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQA 367
+WN++I + QNG EA++ F+ M + + P+ VTL ++ AC ++ G +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 368 ----KLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYD 402
KL + +L VD+ ++ R KEA+ F++D
Sbjct: 280 VKNDKLRNDIILSN----AFVDMYAKCSRIKEAR-FIFD 313
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 162/365 (44%), Gaps = 100/365 (27%)
Query: 51 CGSESDKFSSVHQVFDEVPDLN------VVSATTIIG----------------------- 81
CGS D QVFD++P N VV+ T +G
Sbjct: 68 CGSLEDG----RQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123
Query: 82 --RFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGL 139
FA+ EEA+ F+ M +E++F SV+ + + L D+N G Q+H+ K
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPF 183
Query: 140 QSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQE 199
S+V++GSA++D+Y K ++ +A RVF++ + NVVS
Sbjct: 184 LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS----------------------- 220
Query: 200 MPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMG 259
WN++I + Q G EA+++F ML + P+ TL I A A+++A+ +G
Sbjct: 221 --------WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVG 272
Query: 260 KSFHACAVKFLGKL--DVFVGNSLISFYAKCGSMEDSLLVFD------------------ 299
+ H VK KL D+ + N+ + YAKC ++++ +FD
Sbjct: 273 QEVHGRVVKN-DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 331
Query: 300 -------------KLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLG 346
K+ ERN+V+WNA+I GY QNG EEA+ F ++ + P +
Sbjct: 332 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 391
Query: 347 LLWAC 351
+L AC
Sbjct: 392 ILKAC 396
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 346 bits (888), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 272/445 (61%), Gaps = 42/445 (9%)
Query: 58 FSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPS 117
+ HQ+FD++P NV+S TT+I ++K +++A+ L ML N+RP+ +T+ SV+ S
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 118 STALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSY 177
+ D+ + LH K GL+S+VFV SA++D++ KL P
Sbjct: 172 CNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGE-------------P----- 210
Query: 178 TTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLV 237
EDAL +F EM + + WN++IGG++Q R++ A+ LF M R G +
Sbjct: 211 -------------EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 238 PNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLV 297
+TL + A +A L +G H VK+ D+ + N+L+ Y KCGS+ED+L V
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRV 315
Query: 298 FDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLV 357
F+++ ER+++TW+ +I G AQNG +EA++ FERM+ +G +PN +T++G+L+AC+H GL+
Sbjct: 316 FNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 358 EKGYSYF-SQAKLE--DPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKA 414
E G+ YF S KL DP EHY CM+DLL ++G+ +A + L ++ +P W+
Sbjct: 376 EDGWYYFRSMKKLYGIDP---VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 415 LLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGM 474
LLG C++ N+ L E+AA++++ALDPED +Y +LSN + + KWD+V IR M+++G+
Sbjct: 433 LLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Query: 475 TRVPGCSWIEIKSKVHVFVTGDRNH 499
+ PGCSWIE+ ++H F+ GD +H
Sbjct: 493 KKEPGCSWIEVNKQIHAFIIGDNSH 517
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 7/254 (2%)
Query: 165 VFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEA 224
++ + H P + +I +K DA +LF +MP RNV+SW MI YS+ +++A
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 225 VNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISF 284
+ L + MLR+ + PN T + + ++ + M H +K + DVFV ++LI
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDV 203
Query: 285 YAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTL 344
+AK G ED+L VFD++ + + WN++I G+AQN R + A+E F+RM+ G TL
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263
Query: 345 LGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLP 404
+L AC L+E G D ++ +VD+ + G ++A +
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYDQDLILNN---ALVDMYCKCGSLEDALRVFNQMK 320
Query: 405 FDPGIGFWKALLGG 418
+ + W ++ G
Sbjct: 321 -ERDVITWSTMISG 333
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 341 bits (875), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 184/461 (39%), Positives = 275/461 (59%), Gaps = 17/461 (3%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALE 122
+VFDE+ + VS II + E ++LF ML I P EFTFGS++ + T
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-G 496
Query: 123 DLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMIC 182
L G ++H+ K G+ SN VG +++D+Y K IEEA ++ VS T
Sbjct: 497 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT---- 552
Query: 183 GLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHST 242
+ + E+ + K QEM VSWN++I GY ++E+A LF M+ G+ P+ T
Sbjct: 553 -MEELEKMHN--KRLQEM----CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 605
Query: 243 LPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLT 302
+ AN+A+ G+GK HA +K + DV++ ++L+ Y+KCG + DS L+F+K
Sbjct: 606 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 665
Query: 303 ERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYS 362
R+ VTWNA+ICGYA +G+GEEAI+ FERM + I+PN VT + +L AC H GL++KG
Sbjct: 666 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 363 YFSQAKLEDPGMLKPE--HYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQ 420
YF K D G L P+ HY+ MVD+L +SG+ K A E + ++PF+ W+ LLG C
Sbjct: 726 YFYMMK-RDYG-LDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 783
Query: 421 IH-SNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPG 479
IH +NVE+ E A +L LDP+D S+Y +LSN + AG W+ VS++RR M+ + + PG
Sbjct: 784 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPG 843
Query: 480 CSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIREFE 520
CSW+E+K ++HVF+ GD+ H +EIY L +++ F+
Sbjct: 844 CSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFD 884
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 165/347 (47%), Gaps = 35/347 (10%)
Query: 53 SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFG 112
++ +F +VF +P+ N VS + II + + A+ F M +N S+ +
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 113 SVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNP 172
SV+ S AL +L LG QLHA A K ++ V +A LD+Y K ++++A +F+++ N
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 173 NVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEML 232
N R+ S+NAMI GYSQ +A+ LF ++
Sbjct: 346 N-------------RQ------------------SYNAMITGYSQEEHGFKALLLFHRLM 374
Query: 233 REGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSME 292
GL + +L A A + L G + A+K LDV V N+ I Y KC ++
Sbjct: 375 SSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA 434
Query: 293 DSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACN 352
++ VFD++ R+ V+WNA+I + QNG+G E + F M + I P+ T +L AC
Sbjct: 435 EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 494
Query: 353 HTGLVEKGYSYFSQAKLEDPGMLKPEHYAC-MVDLLSRSGRFKEAKE 398
L GY + + GM C ++D+ S+ G +EA++
Sbjct: 495 GGSL---GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 179/405 (44%), Gaps = 58/405 (14%)
Query: 44 IRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLN 103
+RT ++ ++ D +FD +LN S +I ++++ H +A+ LF R++
Sbjct: 318 VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 377
Query: 104 IRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEAT 163
+ E + V + ++ L+ G Q++ A K L +V V +A +D+Y K ++ EA
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 164 RVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEE 223
RVF+ EM R+ VSWNA+I + Q G+ E
Sbjct: 438 RVFD-------------------------------EMRRRDAVSWNAIIAAHEQNGKGYE 466
Query: 224 AVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLIS 283
+ LF+ MLR + P+ T +I+ A +LG G H+ VK + VG SLI
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFG-SILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLID 525
Query: 284 FYAKCGSMEDSLLVFDKLTER-NI-------------------VTWNAVICGYAQNGRGE 323
Y+KCG +E++ + + +R N+ V+WN++I GY + E
Sbjct: 526 MYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 585
Query: 324 EAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYAC- 382
+A F RM GI P+ T +L C + G +Q ++ L+ + Y C
Sbjct: 586 DAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE---LQSDVYICS 642
Query: 383 -MVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVE 426
+VD+ S+ G +++ +++ W A++ G H E
Sbjct: 643 TLVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNAMICGYAHHGKGE 686
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 107/210 (50%)
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICG 183
L LGKQ HA G + FV + +L +Y A+ VF+ +VVS+ MI G
Sbjct: 64 LELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING 123
Query: 184 LLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTL 243
K A F MP R+VVSWN+M+ GY Q G + +++ +F++M REG+ + T
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 244 PCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTE 303
+ + + +G H V+ DV ++L+ YAK +SL VF + E
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243
Query: 304 RNIVTWNAVICGYAQNGRGEEAIEFFERMR 333
+N V+W+A+I G QN A++FF+ M+
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 144/299 (48%), Gaps = 31/299 (10%)
Query: 53 SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFG 112
S+S+ + F+ +P +VVS +++ + + ++I +F M I TF
Sbjct: 125 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 184
Query: 113 SVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNP 172
++ + LED +LG Q+H +VG ++V SA+LD+Y K E+ RVF+
Sbjct: 185 IILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK 244
Query: 173 NVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEML 232
N VS++ +I G ++ ALK F+EM N G SQ+ ++ +L
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN--------AGVSQS--------IYASVL 288
Query: 233 REGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSME 292
R + A ++ L +G HA A+K D V + + YAKC +M+
Sbjct: 289 R---------------SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ 333
Query: 293 DSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWAC 351
D+ ++FD N ++NA+I GY+Q G +A+ F R+ +G+ + ++L G+ AC
Sbjct: 334 DAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRAC 392
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 38/205 (18%)
Query: 231 MLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKF--LGKLDVFVGNSLISFYAKC 288
M+ G P L C + N + F + ++ F + DV N +I+ Y+K
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTN------SRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 127
Query: 289 GSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLL 348
M + F+ + R++V+WN+++ GY QNG ++IE F M GI +G T +L
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 349 WACNHTGLVEKGYSYFSQAKLEDPGMLKPEH--------------YACMVDLLSRSGRFK 394
C+ LED + H + ++D+ ++ RF
Sbjct: 188 KVCSF---------------LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 395 EAKEFLYDLPFDPGIGFWKALLGGC 419
E+ +P + W A++ GC
Sbjct: 233 ESLRVFQGIPEKNSVS-WSAIIAGC 256
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 268/469 (57%), Gaps = 36/469 (7%)
Query: 51 CGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFT 110
CGS +VF+++P + V+ TT+I +++ +A+ F++ML P+EFT
Sbjct: 108 CGS----LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 111 FGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTH 170
SVI ++ A G QLH + K G SNV VGSA+LDLY + +++A VF
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVF---- 219
Query: 171 NPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIE 230
DAL+ RN VSWNA+I G+++ E+A+ LF
Sbjct: 220 ---------------------DALE------SRNDVSWNALIAGHARRSGTEKALELFQG 252
Query: 231 MLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGS 290
MLR+G P+H + A ++ L GK HA +K KL F GN+L+ YAK GS
Sbjct: 253 MLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 312
Query: 291 MEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWA 350
+ D+ +FD+L +R++V+WN+++ YAQ+G G+EA+ +FE MR GIRPN ++ L +L A
Sbjct: 313 IHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA 372
Query: 351 CNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIG 410
C+H+GL+++G+ Y+ K +D + + HY +VDLL R+G A F+ ++P +P
Sbjct: 373 CSHSGLLDEGWHYYELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 431
Query: 411 FWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMK 470
WKALL C++H N ELG +AA + LDP+D +V+L N + G+W++ + +R++MK
Sbjct: 432 IWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK 491
Query: 471 EKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIREF 519
E G+ + P CSW+EI++ +H+FV D H +EI +I+E
Sbjct: 492 ESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKEL 540
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 175/367 (47%), Gaps = 36/367 (9%)
Query: 111 FGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTH 170
+ +++ T + L G+ +HA + + ++ +G+ +L++Y K S+EEA +V
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV----- 117
Query: 171 NPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIE 230
F++MP R+ V+W +I GYSQ R +A+ F +
Sbjct: 118 --------------------------FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 231 MLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGS 290
MLR G PN TL I AAA G H VK +V VG++L+ Y + G
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL 211
Query: 291 MEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWA 350
M+D+ LVFD L RN V+WNA+I G+A+ E+A+E F+ M +G RP+ + L A
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 351 CNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIG 410
C+ TG +E+G + ++ L ++D+ ++SG +A++ ++D +
Sbjct: 272 CSSTGFLEQG-KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK-IFDRLAKRDVV 329
Query: 411 FWKALLGGCQIH--SNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRRE 468
W +LL H + F R + + P ++S +L+ A S +G D +
Sbjct: 330 SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLT-ACSHSGLLDEGWHYYEL 388
Query: 469 MKEKGMT 475
MK+ G+
Sbjct: 389 MKKDGIV 395
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 328 bits (840), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 282/469 (60%), Gaps = 5/469 (1%)
Query: 50 SCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEF 109
SCG S +VF + + +VVS ++I F ++ ++A+ LF +M +++ S
Sbjct: 178 SCGD----LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHV 233
Query: 110 TFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDT 169
T V+ + + +L G+Q+ ++ + + N+ + +A+LD+Y K SIE+A R+F+
Sbjct: 234 TMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 293
Query: 170 HNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFI 229
+ V++TTM+ G E +E A ++ MP +++V+WNA+I Y Q G+ EA+ +F
Sbjct: 294 EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFH 353
Query: 230 EM-LREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKC 288
E+ L++ + N TL + A A + AL +G+ H+ K +++ V ++LI Y+KC
Sbjct: 354 ELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKC 413
Query: 289 GSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLL 348
G +E S VF+ + +R++ W+A+I G A +G G EA++ F +M+ ++PNGVT +
Sbjct: 414 GDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVF 473
Query: 349 WACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPG 408
AC+HTGLV++ S F Q + + + +HYAC+VD+L RSG ++A +F+ +P P
Sbjct: 474 CACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPS 533
Query: 409 IGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRRE 468
W ALLG C+IH+N+ L E A R+L L+P + ++V+LSN + GKW+NVS +R+
Sbjct: 534 TSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKH 593
Query: 469 MKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIR 517
M+ G+ + PGCS IEI +H F++GD H M++++Y L E+++
Sbjct: 594 MRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK 642
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 149/293 (50%), Gaps = 14/293 (4%)
Query: 171 NPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIE 230
+P S + L E A K+F E+P N +WN +I Y+ ++ F++
Sbjct: 61 DPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLD 120
Query: 231 MLREG-LVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCG 289
M+ E PN T P I AAA +++L +G+S H AVK DVFV NSLI Y CG
Sbjct: 121 MVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG 180
Query: 290 SMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLW 349
++ + VF + E+++V+WN++I G+ Q G ++A+E F++M ++ + VT++G+L
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240
Query: 350 ACNHTGLVEKGY---SYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFD 406
AC +E G SY + ++ L M+D+ ++ G ++AK L+D +
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLA----NAMLDMYTKCGSIEDAKR-LFDAMEE 295
Query: 407 PGIGFWKALLGGCQIHSNVELGEFAARRILALDPE-DVSSYVMLSNALSVAGK 458
W +L G I + E AAR +L P+ D+ ++ L +A GK
Sbjct: 296 KDNVTWTTMLDGYAISEDYE----AAREVLNSMPQKDIVAWNALISAYEQNGK 344
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 182/396 (45%), Gaps = 72/396 (18%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLN-IRPSEFTFGSVIPSSTAL 121
+VFDE+P N + T+I +A +I+ F M+ + P+++TF +I ++ +
Sbjct: 85 KVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEV 144
Query: 122 EDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMI 181
L+LG+ LH A K + S+VFV ++++ Y ++ A +VF +VVS+ +MI
Sbjct: 145 SSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMI 204
Query: 182 CGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHS 241
G +++ + AL+LF++M +V + +H
Sbjct: 205 NGFVQKGSPDKALELFKKMESEDVKA-------------------------------SHV 233
Query: 242 TLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKL 301
T+ + A A I L G+ + + +++ + N+++ Y KCGS+ED+ +FD +
Sbjct: 234 TMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 293
Query: 302 TE-------------------------------RNIVTWNAVICGYAQNGRGEEAIEFFE 330
E ++IV WNA+I Y QNG+ EA+ F
Sbjct: 294 EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFH 353
Query: 331 RMRIN-GIRPNGVTLLGLLWACNHTGLVEKG---YSYFSQAKLEDPGMLKPEHYACMVDL 386
+++ ++ N +TL+ L AC G +E G +SY + + + + ++ +
Sbjct: 354 ELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR----MNFHVTSALIHM 409
Query: 387 LSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIH 422
S+ G ++++E +++ + W A++GG +H
Sbjct: 410 YSKCGDLEKSRE-VFNSVEKRDVFVWSAMIGGLAMH 444
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 261/447 (58%), Gaps = 31/447 (6%)
Query: 72 NVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLH 131
+VVS TT+I + + + ++A+ F +ML IR E + + + L+ L G+Q+H
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 132 AWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFE 191
A A G S++ +A++ LY + IEE+ FE T + ++
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA--------------- 659
Query: 192 DALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAA 251
WNA++ G+ Q+G NEEA+ +F+ M REG+ N+ T A+ AA+
Sbjct: 660 ----------------WNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 252 NIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNA 311
A + GK HA K + V N+LIS YAKCGS+ D+ F +++ +N V+WNA
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763
Query: 312 VICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLED 371
+I Y+++G G EA++ F++M + +RPN VTL+G+L AC+H GLV+KG +YF E
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 372 PGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFA 431
KPEHY C+VD+L+R+G AKEF+ ++P P W+ LL C +H N+E+GEFA
Sbjct: 824 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883
Query: 432 ARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKSKVHV 491
A +L L+PED ++YV+LSN +V+ KWD R++MKEKG+ + PG SWIE+K+ +H
Sbjct: 884 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943
Query: 492 FVTGDRNHHMNDEIYAVLRSCTEQIRE 518
F GD+NH + DEI+ + T++ E
Sbjct: 944 FYVGDQNHPLADEIHEYFQDLTKRASE 970
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 164/371 (44%), Gaps = 70/371 (18%)
Query: 60 SVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSST 119
S +F + + V+ T+I ++ + E+A+ LF RM L + P T S++ + +
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 120 ALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVF------------- 166
A L G+QLHA+ TK+G SN + A+L+LY K + IE A F
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 167 --------EDTHN--------------PNVVSYTTM------------------------ 180
+D N PN +Y ++
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 181 ------ICGLL-----KRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFI 229
+C +L K + + A + ++VVSW MI GY+Q +++A+ F
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580
Query: 230 EMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCG 289
+ML G+ + L A+ A A + AL G+ HA A D+ N+L++ Y++CG
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 290 SMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLW 349
+E+S L F++ + + WNA++ G+ Q+G EEA+ F RM GI N T +
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 350 ACNHTGLVEKG 360
A + T +++G
Sbjct: 701 AASETANMKQG 711
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 182/420 (43%), Gaps = 45/420 (10%)
Query: 43 AIRTDSVSCGSESDKFSS------VHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLF 96
+R +V C D +S +VFD + + S +I +K EAI LF
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 97 SRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKL 156
M +L I P+ + F SV+ + +E L +G+QLH K+G S+ +V +A++ LY L
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 157 SSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYS 216
++ A +F + M R+ V++N +I G S
Sbjct: 337 GNLISAEHIFSN-------------------------------MSQRDAVTYNTLINGLS 365
Query: 217 QTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVF 276
Q G E+A+ LF M +GL P+ +TL ++A + L G+ HA K +
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 277 VGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRING 336
+ +L++ YAKC +E +L F + N+V WN ++ Y + F +M+I
Sbjct: 426 IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 485
Query: 337 IRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYAC--MVDLLSRSGRFK 394
I PN T +L C G +E G SQ + + Y C ++D+ ++ G+
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN---FQLNAYVCSVLIDMYAKLGKLD 542
Query: 395 EAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALS 454
A + L + W ++ G ++ + R++ LD S V L+NA+S
Sbjct: 543 TAWDILIRFAGKDVVS-WTTMIAGYTQYNFDDKALTTFRQM--LDRGIRSDEVGLTNAVS 599
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 145/299 (48%), Gaps = 32/299 (10%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALE 122
+VFDE+P+ + + +I A ++ E LF RM+ N+ P+E TF V+ +
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 123 -DLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMI 181
++ +Q+HA GL+ + V + ++DLY + ++ A RVF+ + S+ MI
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 182 CGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHS 241
GL K E EA+ LF +M G++P
Sbjct: 261 SGLSKNE-------------------------------CEAEAIRLFCDMYVLGIMPTPY 289
Query: 242 TLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKL 301
+ A I +L +G+ H +K D +V N+L+S Y G++ + +F +
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 302 TERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG 360
++R+ VT+N +I G +Q G GE+A+E F+RM ++G+ P+ TL L+ AC+ G + +G
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 108/260 (41%), Gaps = 35/260 (13%)
Query: 104 IRPSEFTFGSVIPSSTALE-DLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEA 162
IRP+ T ++ L+ G++LH+ K+GL SN + + D Y
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFY--------- 130
Query: 163 TRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNE 222
L K + + A K+F EMP R + +WN MI +
Sbjct: 131 ---------------------LFKGDLY-GAFKVFDEMPERTIFTWNKMIKELASRNLIG 168
Query: 223 EAVNLFIEMLREGLVPNHSTLPCAIIAA-ANIAALGMGKSFHACAVKFLGKLD-VFVGNS 280
E LF+ M+ E + PN T + A A + + HA + + G D V N
Sbjct: 169 EVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHA-RILYQGLRDSTVVCNP 227
Query: 281 LISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPN 340
LI Y++ G ++ + VFD L ++ +W A+I G ++N EAI F M + GI P
Sbjct: 228 LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 287
Query: 341 GVTLLGLLWACNHTGLVEKG 360
+L AC +E G
Sbjct: 288 PYAFSSVLSACKKIESLEIG 307
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 5/219 (2%)
Query: 49 VSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSE 108
V+ S K + F++ + ++ ++ F + + EEA+ +F RM I +
Sbjct: 633 VTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 692
Query: 109 FTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFED 168
FTFGS + +++ ++ GKQ+HA TK G S V +A++ +Y K SI +A + F +
Sbjct: 693 FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 169 THNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNV----VSWNAMIGGYSQTGRNEEA 224
N VS+ +I K +AL F +M H NV V+ ++ S G ++
Sbjct: 753 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Query: 225 VNLFIEMLRE-GLVPNHSTLPCAIIAAANIAALGMGKSF 262
+ F M E GL P C + L K F
Sbjct: 813 IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 12/190 (6%)
Query: 235 GLVPNHSTLPCAIIAAANI-AALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMED 293
G+ PNH TL + +L G+ H+ +K + + L FY G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 294 SLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNH 353
+ VFD++ ER I TWN +I A E F RM + PN T G+L AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 354 TG----LVEKGYSYFSQAKLEDPGML-KPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPG 408
+VE+ ++ L D ++ P ++DL SR+G A+ L
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNP-----LIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 409 IGFWKALLGG 418
W A++ G
Sbjct: 254 SS-WVAMISG 262
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 326 bits (836), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/453 (37%), Positives = 265/453 (58%), Gaps = 8/453 (1%)
Query: 57 KFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIP 116
K Q FD + +VVS TII +A+ +EA LF + ++ FT+ +++
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVS 289
Query: 117 SSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVS 176
+ ++L + N +A+L Y++ +E A +F+ NV +
Sbjct: 290 GYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 177 YTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGL 236
+ TMI G + + +A LF +MP R+ VSW AMI GYSQ+G + EA+ LF++M REG
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 237 VPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLL 296
N S+ A+ A++ AL +GK H VK + FVGN+L+ Y KCGS+E++
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 297 VFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGL 356
+F ++ ++IV+WN +I GY+++G GE A+ FFE M+ G++P+ T++ +L AC+HTGL
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 357 VEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALL 416
V+KG YF + M +HYACMVDLL R+G ++A + ++PF+P W LL
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 417 GGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTR 476
G ++H N EL E AA +I A++PE+ YV+LSN + +G+W +V +R M++KG+ +
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 645
Query: 477 VPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVL 509
VPG SWIEI++K H F GD H DEI+A L
Sbjct: 646 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL 678
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 187/429 (43%), Gaps = 55/429 (12%)
Query: 57 KFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRM-----LLLNIRPSEFTF 111
+F ++FDE+P+ ++VS +I + + + +A LF M N S +
Sbjct: 110 EFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ 169
Query: 112 GSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHN 171
+ + ++ D K +W +A+L Y++ S +EEA +F+ N
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSW-------------NALLSAYVQNSKMEEACMLFKSREN 216
Query: 172 PNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIE- 230
+VS+ ++ G +K+++ +A + F M R+VVSWN +I GY+Q+G+ +EA LF E
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDES 276
Query: 231 ---------MLREGLVPNH---------STLP--CAIIAAANIAALGMGKSFHACAVKF- 269
+ G + N +P + A +A G+ F
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 270 -LGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEF 328
+ +V N++I+ YA+CG + ++ +FDK+ +R+ V+W A+I GY+Q+G EA+
Sbjct: 337 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 329 FERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVD--- 385
F +M G R N + L C +E G +L G C V
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQL--HGRLVKGGY----ETGCFVGNAL 450
Query: 386 --LLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIH--SNVELGEFAARRILALDPE 441
+ + G +EA + ++ I W ++ G H V L F + + L P+
Sbjct: 451 LLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 442 DVSSYVMLS 450
D + +LS
Sbjct: 510 DATMVAVLS 518
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 153 YIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMI 212
Y++ EA RVF+ + VSY MI G L+ FE A KLF EMP R++VSWN MI
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 213 GGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGK 272
GY + +A LF + + +
Sbjct: 134 KGYVRNRNLGKARELF---------------------------------------EIMPE 154
Query: 273 LDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERM 332
DV N+++S YA+ G ++D+ VFD++ E+N V+WNA++ Y QN + EEA F+
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS- 213
Query: 333 RINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGR 392
R N + W C G V+K ++ + + + ++ ++SG+
Sbjct: 214 -----RENWAL---VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK 265
Query: 393 FKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPE--DVSSYVMLS 450
EA++ + P + W A++ G + VE AR + PE +VS ML+
Sbjct: 266 IDEARQLFDESPVQD-VFTWTAMVSGYIQNRMVE----EARELFDKMPERNEVSWNAMLA 320
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 15/301 (4%)
Query: 46 TDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIR 105
T CG K S +FD++P + VS +I +++ H EA+ LF +M R
Sbjct: 351 TGYAQCG----KISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 106 PSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRV 165
+ +F S + + + L LGKQLH K G ++ FVG+A+L +Y K SIEEA +
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 166 FEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNV----VSWNAMIGGYSQTGRN 221
F++ ++VS+ TMI G + E AL+ F+ M + + A++ S TG
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 222 EEAVNLFIEMLRE-GLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNS 280
++ F M ++ G++PN C + + G+ + H + D + +
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDL---LGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 281 LISFYAKCGSMEDSLLVFDK---LTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGI 337
L+ G+ E + DK + N + + YA +GR + + RMR G+
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Query: 338 R 338
+
Sbjct: 644 K 644
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 271 GKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFE 330
G D+ N IS Y + G ++L VF ++ + V++N +I GY +NG E A + F+
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFD 119
Query: 331 RM 332
M
Sbjct: 120 EM 121
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 16/153 (10%)
Query: 300 KLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEK 359
K + +I WN I Y + GR EA+ F+RM R + V+ G++ G E
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNGMISGYLRNGEFEL 113
Query: 360 GYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGC 419
F + D + M+ R+ +A+E +P + + W +L G
Sbjct: 114 ARKLFDEMPERD-----LVSWNVMIKGYVRNRNLGKARELFEIMP-ERDVCSWNTMLSGY 167
Query: 420 QIHSNVELGEFAARRILALDPE--DVSSYVMLS 450
+ V+ AR + PE DVS +LS
Sbjct: 168 AQNGCVD----DARSVFDRMPEKNDVSWNALLS 196
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 326 bits (835), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 276/500 (55%), Gaps = 41/500 (8%)
Query: 59 SSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSS 118
+S +VFDE+P+ NV+ +I + Y E + +F M N+RP +TF V+ +
Sbjct: 91 ASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKAC 150
Query: 119 TALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYT 178
+ + +G+++H ATKVGL S +FVG+ ++ +Y K + EA V ++ +VVS+
Sbjct: 151 SCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWN 210
Query: 179 TMICGLLKRERFEDALK-------------------------------------LFQEMP 201
+++ G + +RF+DAL+ +F +M
Sbjct: 211 SLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMG 270
Query: 202 HRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKS 261
+++VSWN MIG Y + EAV L+ M +G P+ ++ + A + +AL +GK
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 262 FHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGR 321
H + ++ + N+LI YAKCG +E + VF+ + R++V+W A+I Y +GR
Sbjct: 331 IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGR 390
Query: 322 GEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKP--EH 379
G +A+ F +++ +G+ P+ + + L AC+H GL+E+G S F + D + P EH
Sbjct: 391 GCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL--MTDHYKITPRLEH 448
Query: 380 YACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALD 439
ACMVDLL R+G+ KEA F+ D+ +P W ALLG C++HS+ ++G AA ++ L
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 440 PEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNH 499
PE YV+LSN + AG+W+ V+NIR MK KG+ + PG S +E+ +H F+ GDR+H
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Query: 500 HMNDEIYAVLRSCTEQIREF 519
+DEIY L ++++E
Sbjct: 569 PQSDEIYRELDVLVKKMKEL 588
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Query: 140 QSNVFVGSAILDLYIKLSSIEEA-TRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQ 198
Q VF+ +LD Y + ++ +R+ + N ++ + A K+F
Sbjct: 39 QETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFD 98
Query: 199 EMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGM 258
E+P RNV+ N MI Y G E V +F M + P+H T PC + A + + +
Sbjct: 99 EIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVI 158
Query: 259 GKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQ 318
G+ H A K +FVGN L+S Y KCG + ++ LV D+++ R++V+WN+++ GYAQ
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 319 NGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHT 354
N R ++A+E M I + T+ LL A ++T
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 277 VGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRING 336
+G L+ YA + + VFD++ ERN++ N +I Y NG E ++ F M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 337 IRPNGVTLLGLLWACNHTGLVEKG 360
+RP+ T +L AC+ +G + G
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIG 159
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 325 bits (834), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 169/443 (38%), Positives = 251/443 (56%), Gaps = 31/443 (6%)
Query: 74 VSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAW 133
VS +I A+ +EAI F M + ++ ++ FGSV+P+ L +N GKQ+HA
Sbjct: 236 VSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHAC 295
Query: 134 ATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDA 193
+ Q +++VGSA++D+Y K + A VF+
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFD-------------------------- 329
Query: 194 LKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANI 253
M +NVVSW AM+ GY QTGR EEAV +F++M R G+ P+H TL AI A AN+
Sbjct: 330 -----RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 254 AALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVI 313
++L G FH A+ V V NSL++ Y KCG ++DS +F+++ R+ V+W A++
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 314 CGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPG 373
YAQ GR E I+ F++M +G++P+GVTL G++ AC+ GLVEKG YF E
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGI 504
Query: 374 MLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAAR 433
+ HY+CM+DL SRSGR +EA F+ +PF P W LL C+ N+E+G++AA
Sbjct: 505 VPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAE 564
Query: 434 RILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKSKVHVFV 493
++ LDP + Y +LS+ + GKWD+V+ +RR M+EK + + PG SWI+ K K+H F
Sbjct: 565 SLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFS 624
Query: 494 TGDRNHHMNDEIYAVLRSCTEQI 516
D + D+IYA L +I
Sbjct: 625 ADDESSPYLDQIYAKLEELNNKI 647
Score = 178 bits (451), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 175/316 (55%), Gaps = 2/316 (0%)
Query: 53 SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLL-LNIRPSEFTF 111
S++ S + F+++PD + V+ +I ++ A+ ++ M+ + + T
Sbjct: 83 SKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL 142
Query: 112 GSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHN 171
+++ S++ ++LGKQ+H K+G +S + VGS +L +Y + I +A +VF +
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 172 PNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEM 231
N V Y +++ GLL EDAL+LF+ M ++ VSW AMI G +Q G +EA+ F EM
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 232 LREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSM 291
+GL + + A + A+ GK HAC ++ + ++VG++LI Y KC +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 292 EDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWAC 351
+ VFD++ ++N+V+W A++ GY Q GR EEA++ F M+ +GI P+ TL + AC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 352 NHTGLVEKGYSYFSQA 367
+ +E+G + +A
Sbjct: 382 ANVSSLEEGSQFHGKA 397
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 173/431 (40%), Gaps = 72/431 (16%)
Query: 128 KQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKR 187
K +H + F+ + I+ Y + S A RVF+ PN+ S+ ++ K
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 188 ERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLRE-GLVPNHSTLPCA 246
+ F+++P R+ V+WN +I GYS +G AV + M+R+ TL
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 247 IIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNI 306
+ +++ + +GK H +K + + VG+ L+ YA G + D+ VF L +RN
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 307 ------------------------------VTWNAVICGYAQNGRGEEAIEFFERMRING 336
V+W A+I G AQNG +EAIE F M++ G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 337 IRPNGVTLLGLLWACNHTGLVEKG--------------YSYFSQAKLEDPGMLKPEHYA- 381
++ + +L AC G + +G + Y A ++ K HYA
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 382 ---------------CMVDLLSRSGRFKEAKEFLYDLP---FDPGIGFWKALLGGCQIHS 423
MV ++GR +EA + D+ DP + C S
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 424 NVELG-EFAARRILALDPEDVSSYVMLSNAL-SVAGKWDNVSNIRREMKEKGMTRVPGCS 481
++E G +F + I + + YV +SN+L ++ GK ++ + R E M S
Sbjct: 386 SLEEGSQFHGKAITS----GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE--MNVRDAVS 439
Query: 482 WIEIKSKVHVF 492
W + S F
Sbjct: 440 WTAMVSAYAQF 450
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 267/466 (57%), Gaps = 34/466 (7%)
Query: 53 SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFG 112
S+ D+ +FDE+P+L+ VS +I +++ YE +++ F M + F F
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA 355
Query: 113 SVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNP 172
+++ + L L +G+QLH A S + VG++++D+Y K
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC---------------- 399
Query: 173 NVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEML 232
E FE+A +F+ +P R VSW A+I GY Q G + + LF +M
Sbjct: 400 ---------------EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 233 REGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSME 292
L + ST + A+A+ A+L +GK HA ++ +VF G+ L+ YAKCGS++
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 293 DSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACN 352
D++ VF+++ +RN V+WNA+I +A NG GE AI F +M +G++P+ V++LG+L AC+
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 353 HTGLVEKGYSYFSQAKLEDPGML-KPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGF 411
H G VE+G YF QA G+ K +HYACM+DLL R+GRF EA++ + ++PF+P
Sbjct: 565 HCGFVEQGTEYF-QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 623
Query: 412 WKALLGGCQIHSNVELGEFAARRILALDP-EDVSSYVMLSNALSVAGKWDNVSNIRREMK 470
W ++L C+IH N L E AA ++ +++ D ++YV +SN + AG+W+ V ++++ M+
Sbjct: 624 WSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMR 683
Query: 471 EKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQI 516
E+G+ +VP SW+E+ K+HVF + D+ H DEI + T +I
Sbjct: 684 ERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 180/384 (46%), Gaps = 37/384 (9%)
Query: 64 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALED 123
+F+E+P+ + V+ T+I + K Y E+I+LF +M +PS+FTF V+ + L D
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICG 183
LG+QLHA + G + VG+ ILD Y K + E +F++ + VSY +I
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 184 LLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTL 243
+ +++E +L F+EM G+ + RN F ML
Sbjct: 326 YSQADQYEASLHFFREM----------QCMGFDR--RNFP----FATMLS---------- 359
Query: 244 PCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTE 303
AAN+++L MG+ H A+ + VGNSL+ YAKC E++ L+F L +
Sbjct: 360 -----IAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
Query: 304 RNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSY 363
R V+W A+I GY Q G ++ F +MR + +R + T +L A + G
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL 474
Query: 364 FSQAKLEDPGMLKPEHYAC-MVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIH 422
A + G L+ +VD+ ++ G K+A + ++P D W AL+ +
Sbjct: 475 --HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADN 531
Query: 423 SNVE--LGEFAARRILALDPEDVS 444
+ E +G FA L P+ VS
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVS 555
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 169/365 (46%), Gaps = 39/365 (10%)
Query: 59 SSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLN--IRPSEFTFGSVIP 116
SS +FD +PD VV+ T ++G +A+ H++EA LF +M + P TF +++P
Sbjct: 96 SSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLP 155
Query: 117 SSTALEDLNLGKQLHAWATKVGLQSNVF--VGSAILDLYIKLSSIEEATRVFEDTHNPNV 174
N Q+HA+A K+G +N F V + +L Y ++
Sbjct: 156 GCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV------------------ 197
Query: 175 VSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLRE 234
R + A LF+E+P ++ V++N +I GY + G E+++LF++M +
Sbjct: 198 -------------RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQS 244
Query: 235 GLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDS 294
G P+ T + A + +G+ HA +V D VGN ++ FY+K + ++
Sbjct: 245 GHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLET 304
Query: 295 LLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHT 354
++FD++ E + V++N VI Y+Q + E ++ FF M+ G +L +
Sbjct: 305 RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANL 364
Query: 355 GLVEKGYSYFSQAKLEDPGMLKPEHYA-CMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWK 413
++ G QA L + H +VD+ ++ F+EA+ LP + W
Sbjct: 365 SSLQMGRQLHCQALLATADSIL--HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WT 421
Query: 414 ALLGG 418
AL+ G
Sbjct: 422 ALISG 426
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 4/227 (1%)
Query: 128 KQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKR 187
+++ A K G ++ + I++ ++ + A +V+++ + N VS TMI G +K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 188 ERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREG--LVPNHSTLPC 245
A LF MP R VV+W ++G Y++ +EA LF +M R +P+H T
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 246 AIIAAANIAALGMGKSFHACAVKFLGKLDVF--VGNSLISFYAKCGSMEDSLLVFDKLTE 303
+ + HA AVK + F V N L+ Y + ++ + ++F+++ E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 304 RNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWA 350
++ VT+N +I GY ++G E+I F +MR +G +P+ T G+L A
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 286/518 (55%), Gaps = 44/518 (8%)
Query: 4 LLCICRSSLSLNKLSKLHSLAPNYLIETQKASVQKLETPAIRTDSVSCGSESDKFSSVHQ 63
LL C +L ++H+ ++I+T+ L +RT + + D +
Sbjct: 58 LLNACLDKRALRDGQRVHA----HMIKTRY-----LPATYLRTRLLIFYGKCDCLEDARK 108
Query: 64 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALED 123
V DE+P+ NVVS T +I R+++ H EA+ +F+ M+ + +P+EFTF +V+ S
Sbjct: 109 VLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASG 168
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICG 183
L LGKQ+H K S++FVGS++LD+Y K I+EA +FE C
Sbjct: 169 LGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFE--------------C- 213
Query: 184 LLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTL 243
+P R+VVS A+I GY+Q G +EEA+ +F + EG+ PN+ T
Sbjct: 214 ----------------LPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTY 257
Query: 244 PCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTE 303
+ A + +A L GK H ++ + NSLI Y+KCG++ + +FD + E
Sbjct: 258 ASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPE 317
Query: 304 RNIVTWNAVICGYAQNGRGEEAIEFFERMRING-IRPNGVTLLGLLWACNHTGLVEKGYS 362
R ++WNA++ GY+++G G E +E F MR ++P+ VTLL +L C+H + + G +
Sbjct: 318 RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLN 377
Query: 363 YFSQAKLEDPGMLKP--EHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQ 420
F + G KP EHY C+VD+L R+GR EA EF+ +P P G +LLG C+
Sbjct: 378 IFDGMVAGEYGT-KPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACR 436
Query: 421 IHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGC 480
+H +V++GE RR++ ++PE+ +YV+LSN + AG+W +V+N+R M +K +T+ PG
Sbjct: 437 VHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGR 496
Query: 481 SWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIRE 518
SWI+ + +H F DR H +E+ A ++ + ++++
Sbjct: 497 SWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 164/324 (50%), Gaps = 13/324 (4%)
Query: 106 PSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRV 165
P+ + +++P S + L + L A +G + A+L+ + ++ + RV
Sbjct: 16 PTNYVLQTILPISQLCSNGRLQEALLEMAM-LGPEMGFHGYDALLNACLDKRALRDGQRV 74
Query: 166 ----FEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRN 221
+ + P T ++ K + EDA K+ EMP +NVVSW AMI YSQTG +
Sbjct: 75 HAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHS 134
Query: 222 EEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSL 281
EA+ +F EM+R PN T + + + LG+GK H VK+ +FVG+SL
Sbjct: 135 SEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSL 194
Query: 282 ISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNG 341
+ YAK G ++++ +F+ L ER++V+ A+I GYAQ G EEA+E F R+ G+ PN
Sbjct: 195 LDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNY 254
Query: 342 VTLLGLLWACNHTGLVEKG---YSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKE 398
VT LL A + L++ G + + + +L +L+ ++D+ S+ G A+
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS----LIDMYSKCGNLSYARR 310
Query: 399 FLYDLPFDPGIGFWKALLGGCQIH 422
++P I W A+L G H
Sbjct: 311 LFDNMPERTAIS-WNAMLVGYSKH 333
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 316 bits (809), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 277/502 (55%), Gaps = 5/502 (0%)
Query: 16 KLSKLHSLAPNYLIETQKASVQKLETPAIRTDSVSCGSESDKFSSVHQVFDEVPDLNVVS 75
+LS L + ++++ + V + +I SCG + +VFDE P ++VS
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHM-FASCGD----MENARKVFDESPVRDLVS 224
Query: 76 ATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWAT 135
+I + K E+AIY++ M ++P + T ++ S + L DLN GK+ + +
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK 284
Query: 136 KVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALK 195
+ GL+ + + +A++D++ K I EA R+F++ +VS+TTMI G + + + K
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 344
Query: 196 LFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAA 255
LF +M ++VV WNAMIGG Q R ++A+ LF EM P+ T+ + A + + A
Sbjct: 345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGA 404
Query: 256 LGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICG 315
L +G H K+ L+V +G SL+ YAKCG++ ++L VF + RN +T+ A+I G
Sbjct: 405 LDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGG 464
Query: 316 YAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGML 375
A +G AI +F M GI P+ +T +GLL AC H G+++ G YFSQ K
Sbjct: 465 LALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNP 524
Query: 376 KPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRI 435
+ +HY+ MVDLL R+G +EA + +P + W ALL GC++H NVELGE AA+++
Sbjct: 525 QLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKL 584
Query: 436 LALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKSKVHVFVTG 495
L LDP D YV+L A W++ RR M E+G+ ++PGCS IE+ V F+
Sbjct: 585 LELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVR 644
Query: 496 DRNHHMNDEIYAVLRSCTEQIR 517
D++ +++IY L +R
Sbjct: 645 DKSRPESEKIYDRLHCLGRHMR 666
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 5/251 (1%)
Query: 171 NPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIE 230
+P S C L + + ++K+ + + + N+ SWN I G+S++ +E+ L+ +
Sbjct: 84 DPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQ 143
Query: 231 MLREGLV---PNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAK 287
MLR G P+H T P A++ +G +K +L V N+ I +A
Sbjct: 144 MLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFAS 203
Query: 288 CGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGL 347
CG ME++ VFD+ R++V+WN +I GY + G E+AI ++ M G++P+ VT++GL
Sbjct: 204 CGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGL 263
Query: 348 LWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDP 407
+ +C+ G + +G ++ K M P A M D+ S+ G EA+ +L
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALM-DMFSKCGDIHEARRIFDNLE-KR 321
Query: 408 GIGFWKALLGG 418
I W ++ G
Sbjct: 322 TIVSWTTMISG 332
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 176/409 (43%), Gaps = 73/409 (17%)
Query: 53 SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRML---LLNIRPSEF 109
SES ++ + + N+ S I F++ + +E+ L+ +ML RP F
Sbjct: 98 SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHF 157
Query: 110 TFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDT 169
T+ + L +LG + K+ L+ V +A + ++ +E A +VF+++
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 170 HNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFI 229
P R++VSWN +I GY + G E+A+ ++
Sbjct: 218 -------------------------------PVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 230 EMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCG 289
M EG+ P+ T+ + + + + L GK F+ + ++ + + N+L+ ++KCG
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 290 SMEDSLLVFDKLTERNIVTWNAVICGYAQNG----------------------------- 320
+ ++ +FD L +R IV+W +I GYA+ G
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Query: 321 --RGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG---YSYFSQAKLEDPGML 375
RG++A+ F+ M+ + +P+ +T++ L AC+ G ++ G + Y + L L
Sbjct: 367 AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLS----L 422
Query: 376 KPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSN 424
+VD+ ++ G EA + + + + A++GG +H +
Sbjct: 423 NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY-TAIIGGLALHGD 470
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 315 bits (807), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 167/459 (36%), Positives = 266/459 (57%), Gaps = 4/459 (0%)
Query: 65 FDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNI-RPSEFTFGSVIPSSTALED 123
F+++ + ++V+ ++I F ++ + A+ +FS+ML ++ P FT SV+ + LE
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFED--THNPNVVSYTTMI 181
L +GKQ+H+ G + V +A++ +Y + +E A R+ E T + + +T ++
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 182 CGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHS 241
G +K A +F + R+VV+W AMI GY Q G EA+NLF M+ G PN
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414
Query: 242 TLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKL 301
TL + A+++A+L GK H AVK V V N+LI+ YAK G++ + FD +
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLI 474
Query: 302 -TERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG 360
ER+ V+W ++I AQ+G EEA+E FE M + G+RP+ +T +G+ AC H GLV +G
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 361 YSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQ 420
YF K D + HYACMVDL R+G +EA+EF+ +P +P + W +LL C+
Sbjct: 535 RQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACR 594
Query: 421 IHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGC 480
+H N++LG+ AA R+L L+PE+ +Y L+N S GKW+ + IR+ MK+ + + G
Sbjct: 595 VHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGF 654
Query: 481 SWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIREF 519
SWIE+K KVHVF D H +EIY ++ ++I++
Sbjct: 655 SWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKM 693
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 171/333 (51%), Gaps = 34/333 (10%)
Query: 49 VSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSE 108
+S S+ S + FD++P + VS TT+I + Y +AI + M+ I P++
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQ 146
Query: 109 FTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFED 168
FT +V+ S A + GK++H++ K+GL+ NV V +++L++Y K A VF+
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Query: 169 THNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLF 228
++ S+ MI ++ + + A+ F++M R++V+WN+MI G++Q G + A+++F
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266
Query: 229 IEMLREGLV-PNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAK 287
+MLR+ L+ P+ TL + A AN+ L +GK H+ V + V N+LIS Y++
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 288 CGSME-------------------DSLL--------------VFDKLTERNIVTWNAVIC 314
CG +E +LL +F L +R++V W A+I
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIV 386
Query: 315 GYAQNGRGEEAIEFFERMRINGIRPNGVTLLGL 347
GY Q+G EAI F M G RPN TL +
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 160/359 (44%), Gaps = 65/359 (18%)
Query: 130 LHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRER 189
+H K GL +V++ + ++++Y K A ++F++ S+ T++ KR
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 190 FEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIA 249
+ + F ++P R+ VSW MI GY G+ +A+ + +M++EG+ P TL + +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 250 AANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKC--------------------- 288
A + GK H+ VK + +V V NSL++ YAKC
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 289 ----------GSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERM-RINGI 337
G M+ ++ F+++ ER+IVTWN++I G+ Q G A++ F +M R + +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 338 RPNGVTLLGLLWACN-----------HTGLVEKGY-----------SYFSQAK------- 368
P+ TL +L AC H+ +V G+ S +S+
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 369 -LEDPGM--LKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSN 424
+E G LK E + ++D + G +AK L D + W A++ G + H +
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK-DRDVVAWTAMIVGYEQHGS 393
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 172/398 (43%), Gaps = 79/398 (19%)
Query: 10 SSLSLNKLSKLHSLAPNYLIETQKASVQKLETPAIRTDSVSCGSESD-KFSSVHQ---VF 65
S + LN L ++S +ET + +++ T ++ + + + K ++Q +F
Sbjct: 313 SGIVLNALISMYSRCGG--VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIF 370
Query: 66 DEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLN 125
+ D +VV+ T +I + + Y EAI LF M+ RP+ +T +++ +++L L+
Sbjct: 371 VSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLS 430
Query: 126 LGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTH-NPNVVSYTTMICGL 184
GKQ+H A K G +V V +A++ +Y K +I A+R F+ + VS+T+MI L
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 185 LKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLP 244
+ E+AL+LF+ ML EGL P+H T
Sbjct: 491 AQHGHAEEALELFE-------------------------------TMLMEGLRPDHITYV 519
Query: 245 CAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTER 304
A + + G+ + + +D + +S YA
Sbjct: 520 GVFSACTHAGLVNQGRQY----FDMMKDVDKIIPT--LSHYA------------------ 555
Query: 305 NIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYF 364
++ + + G +EA EF E+M I P+ VT LL AC ++ G
Sbjct: 556 ------CMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSACRVHKNIDLG---- 602
Query: 365 SQAKLEDPGMLKPEH---YACMVDLLSRSGRFKEAKEF 399
+ E +L+PE+ Y+ + +L S G+++EA +
Sbjct: 603 -KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKI 639
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 315 bits (806), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 265/451 (58%), Gaps = 4/451 (0%)
Query: 72 NVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLH 131
N+VS I+ F + +++EA+ +F ++ L P + T SV+PS E LN+G+ +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 132 AWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFE 191
+ K GL + V SA++D+Y K + +F I GL + +
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 192 DALKLFQEMPHR----NVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAI 247
AL++F+ + NVVSW ++I G +Q G++ EA+ LF EM G+ PNH T+P +
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 248 IAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIV 307
A NIAALG G+S H AV+ +V VG++LI YAKCG + S +VF+ + +N+V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 308 TWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQA 367
WN+++ G++ +G+ +E + FE + ++P+ ++ LL AC GL ++G+ YF
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 368 KLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVEL 427
E + EHY+CMV+LL R+G+ +EA + + ++PF+P W ALL C++ +NV+L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 428 GEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKS 487
E AA ++ L+PE+ +YV+LSN + G W V +IR +M+ G+ + PGCSWI++K+
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 488 KVHVFVTGDRNHHMNDEIYAVLRSCTEQIRE 518
+V+ + GD++H D+I + ++++R+
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMRK 666
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 219/468 (46%), Gaps = 50/468 (10%)
Query: 30 ETQKASVQKLETPA-----IRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFA 84
+T +A + L++ A I ++ S + F+ V +PD + S +++I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 85 KQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVF 144
K + ++I +FSRM + P ++ L +GKQ+H + GL + F
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 145 VGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMP--- 201
V ++ +Y++ + +A +VF+ + +VV+ + ++C ++ E+ +++ EM
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 202 -HRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGK 260
N+VSWN ++ G++++G ++EAV +F ++ G P+ T+ + + + L MG+
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 261 SFHACAVK---------------FLGK----------------LDVFVGNSLISFYAKCG 289
H +K GK ++ V N+ I+ ++ G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 290 SMEDSLLVFDKLTER----NIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLL 345
++ +L +F+ E+ N+V+W ++I G AQNG+ EA+E F M++ G++PN VT+
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 346 GLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHY-ACMVDLLSRSGRFKEAKEFLYDLP 404
+L AC + + G S A +L H + ++D+ ++ GR + ++++
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVH--LLDNVHVGSALIDMYAKCGRIN-LSQIVFNMM 449
Query: 405 FDPGIGFWKALLGGCQIHSNVE--LGEFAARRILALDPEDVSSYVMLS 450
+ W +L+ G +H + + F + L P+ +S +LS
Sbjct: 450 PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 34/261 (13%)
Query: 56 DKFSSVHQVFDE-VPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSV 114
DK + ++F E +LNVVS T+II A+ EA+ LF M + ++P+ T S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 115 IPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNV 174
+P+ + L G+ H +A +V L NV VGSA++D+Y K
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAK------------------- 435
Query: 175 VSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLRE 234
CG R + +F MP +N+V WN+++ G+S G+ +E +++F ++R
Sbjct: 436 -------CG-----RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 235 GLVPNHSTLPCAIIAAANIAALGMG-KSFHACAVKFLGKLDVFVGNSLISFYAKCGSMED 293
L P+ + + A + G K F + ++ K + + +++ + G +++
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 294 SL-LVFDKLTERNIVTWNAVI 313
+ L+ + E + W A++
Sbjct: 544 AYDLIKEMPFEPDSCVWGALL 564
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 314 bits (805), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 151/459 (32%), Positives = 261/459 (56%), Gaps = 31/459 (6%)
Query: 60 SVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSST 119
SV +VF+ +P +VVS TII +A+ YE+A+ + M +++P FT SV+P +
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253
Query: 120 ALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTT 179
D+ GK++H + + G+ S+V++GS+++D+Y K + IE++ RV
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV-------------- 299
Query: 180 MICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPN 239
F + R+ +SWN+++ GY Q GR EA+ LF +M+ + P
Sbjct: 300 -----------------FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 240 HSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFD 299
I A A++A L +GK H ++ ++F+ ++L+ Y+KCG+++ + +FD
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402
Query: 300 KLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEK 359
++ + V+W A+I G+A +G G EA+ FE M+ G++PN V + +L AC+H GLV++
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 360 GYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGC 419
+ YF+ + EHYA + DLL R+G+ +EA F+ + +P W LL C
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Query: 420 QIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPG 479
+H N+EL E A +I +D E++ +YV++ N + G+W ++ +R M++KG+ + P
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582
Query: 480 CSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIRE 518
CSWIE+K+K H FV+GDR+H D+I L++ EQ+ +
Sbjct: 583 CSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEK 621
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 197/414 (47%), Gaps = 32/414 (7%)
Query: 33 KASVQKLETPAIRTDSVSCGSESDKFS---------SVHQVFDEVPDLNVVSATTIIGRF 83
K+ ++L IRT S+S S S S +F + V++ ++I F
Sbjct: 21 KSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80
Query: 84 AKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNV 143
Q + +A+ F M P F SV+ S T + DL G+ +H + ++G+ ++
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 144 FVGSAILDLYIKL----------SSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDA 193
+ G+A++++Y KL + +E + ++ + +V + T ++ + R
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVR---- 196
Query: 194 LKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANI 253
++F+ MP ++VVS+N +I GY+Q+G E+A+ + EM L P+ TL + +
Sbjct: 197 -RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 254 AALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVI 313
+ GK H ++ DV++G+SL+ YAK +EDS VF +L R+ ++WN+++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 314 CGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG---YSYFSQAKLE 370
GY QNGR EA+ F +M ++P V ++ AC H + G + Y +
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 371 DPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSN 424
+ + +VD+ S+ G K A++ + + W A++ G +H +
Sbjct: 376 SNIFIA----SALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHALHGH 424
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 169/364 (46%), Gaps = 29/364 (7%)
Query: 53 SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFG 112
++S + +VF + + +S +++ + + Y EA+ LF +M+ ++P F
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 113 SVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNP 172
SVIP+ L L+LGKQLH + + G SN+F+ SA++D+Y K +I+ A ++F+ +
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
Query: 173 NVVSYTTMICGLLKRERFEDALKLFQEMPHRNV----VSWNAMIGGYSQTGRNEEAVNLF 228
+ VS+T +I G +A+ LF+EM + V V++ A++ S G +EA F
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 467
Query: 229 IEMLR-EGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAK 287
M + GL N A +A LG A F+ K+ V S+ S
Sbjct: 468 NSMTKVYGL--NQELEHYAAVA----DLLGRAGKLEE-AYNFISKMCVEPTGSVWSTLLS 520
Query: 288 CGSMEDSLLVFDKLTER-------NIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPN 340
S+ +L + +K+ E+ N+ + + YA NGR +E + RMR G+R
Sbjct: 521 SCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK 580
Query: 341 GVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLK-PEHYACMVDLLSRSGRFKEAKEF 399
AC+ + K + + S + P M K E +++ + + G +
Sbjct: 581 P--------ACSWIEMKNKTHGFVSGDR-SHPSMDKINEFLKAVMEQMEKEGYVADTSGV 631
Query: 400 LYDL 403
L+D+
Sbjct: 632 LHDV 635
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 313 bits (801), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 265/459 (57%), Gaps = 9/459 (1%)
Query: 49 VSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSE 108
+ + + HQ+FDE+P+ + S ++ + + ++E+A F RM +
Sbjct: 100 IGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAA--- 156
Query: 109 FTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFED 168
++ ++I ++ ++L ++ N +A++ YI+ +E+A+ F+
Sbjct: 157 -SWNTMITGYARRGEMEKARELFY----SMMEKNEVSWNAMISGYIECGDLEKASHFFKV 211
Query: 169 THNPNVVSYTTMICGLLKRERFEDALKLFQEMP-HRNVVSWNAMIGGYSQTGRNEEAVNL 227
VV++T MI G +K ++ E A +F++M ++N+V+WNAMI GY + R E+ + L
Sbjct: 212 APVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKL 271
Query: 228 FIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAK 287
F ML EG+ PN S L A++ + ++AL +G+ H K DV SLIS Y K
Sbjct: 272 FRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 331
Query: 288 CGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGL 347
CG + D+ +F+ + ++++V WNA+I GYAQ+G ++A+ F M N IRP+ +T + +
Sbjct: 332 CGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV 391
Query: 348 LWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDP 407
L ACNH GLV G +YF + +P+HY CMVDLL R+G+ +EA + + +PF P
Sbjct: 392 LLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRP 451
Query: 408 GIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRR 467
+ LLG C++H NVEL EFAA ++L L+ ++ + YV L+N + +W++V+ +R+
Sbjct: 452 HAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRK 511
Query: 468 EMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIY 506
MKE + +VPG SWIEI++KVH F + DR H D I+
Sbjct: 512 RMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 313 bits (801), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 269/479 (56%), Gaps = 37/479 (7%)
Query: 43 AIRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLL 102
A+ V+ S+ + + ++FD D N ++ + ++ +++ EA+ LFSRM
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 103 NIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEA 162
I+PSE+T V+ + + + L GKQLH++ K+G + ++F +A++D+Y K +
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA-- 374
Query: 163 TRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNE 222
DA K F + R+V W ++I GY Q NE
Sbjct: 375 -----------------------------DARKGFDCLQERDVALWTSLISGYVQNSDNE 405
Query: 223 EAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLI 282
EA+ L+ M G++PN T+ + A +++A L +GK H +K L+V +G++L
Sbjct: 406 EALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALS 465
Query: 283 SFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGV 342
+ Y+KCGS+ED LVF + +++V+WNA+I G + NG+G+EA+E FE M G+ P+ V
Sbjct: 466 TMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDV 525
Query: 343 TLLGLLWACNHTGLVEKGYSYFSQAKLE---DPGMLKPEHYACMVDLLSRSGRFKEAKEF 399
T + ++ AC+H G VE+G+ YF+ + DP K +HYACMVDLLSR+G+ KEAKEF
Sbjct: 526 TFVNIISACSHKGFVERGWFYFNMMSDQIGLDP---KVDHYACMVDLLSRAGQLKEAKEF 582
Query: 400 LYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKW 459
+ D G+ W+ LL C+ H ELG +A +++AL + S+YV LS + G+
Sbjct: 583 IESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRM 642
Query: 460 DNVSNIRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIRE 518
+V + + M+ G+++ GCSWIE+K++ HVFV GD H M +E ++ + Q+ E
Sbjct: 643 RDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIE 701
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 209/435 (48%), Gaps = 60/435 (13%)
Query: 44 IRTDSVSCGSESD----------KFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEA- 92
IRT + +C ++ K + H +F+ + +VVS ++I +++ +
Sbjct: 41 IRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSY 100
Query: 93 --IYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAIL 150
+ LF M +I P+ +T + + ++L+ +G+Q HA K+ +++V ++++
Sbjct: 101 TVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLV 160
Query: 151 DLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNA 210
+Y K GL+ ED LK+F MP RN +W+
Sbjct: 161 GMYCK--------------------------AGLV-----EDGLKVFAYMPERNTYTWST 189
Query: 211 MIGGYSQTGRNEEAVNLFIEMLREGLVPNHS--TLPCAIIAAANIAALGMGKSFHACAVK 268
M+ GY+ GR EEA+ +F LRE + S + + A +G+G+ H +K
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249
Query: 269 --FLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAI 326
LG V + N+L++ Y+KC S+ ++ +FD +RN +TW+A++ GY+QNG EA+
Sbjct: 250 NGLLGF--VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAV 307
Query: 327 EFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG---YSYFSQAKLEDPGMLKPEHYACM 383
+ F RM GI+P+ T++G+L AC+ +E+G +S+ + E +
Sbjct: 308 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFAT----TAL 363
Query: 384 VDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRI--LALDPE 441
VD+ +++G +A++ +D + + W +L+ G +S+ E RR+ + P
Sbjct: 364 VDMYAKAGCLADARKG-FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPN 422
Query: 442 DVSSYVMLSNALSVA 456
D + +L S+A
Sbjct: 423 DPTMASVLKACSSLA 437
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 197/434 (45%), Gaps = 70/434 (16%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIR--PSEFTFGSVIPSSTA 120
+VF +P+ N + +T++ +A + EEAI +F+ L S++ F +V+ S A
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
Query: 121 LEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTM 180
+ LG+Q+H K GL V + +A++ +Y K S+ EA ++F+ + +
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGD--------- 284
Query: 181 ICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNH 240
RN ++W+AM+ GYSQ G + EAV LF M G+ P+
Sbjct: 285 ----------------------RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 241 STLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDK 300
T+ + A ++I L GK H+ +K + +F +L+ YAK G + D+ FD
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDC 382
Query: 301 LTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACN-------- 352
L ER++ W ++I GY QN EEA+ + RM+ GI PN T+ +L AC+
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 353 ---HTGLVEKGYS------------YFSQAKLEDPGML---KPEH----YACMVDLLSRS 390
H ++ G+ Y LED ++ P + M+ LS +
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHN 502
Query: 391 GRFKEAKEFLYDL---PFDPGIGFWKALLGGCQIHSNVELGEFAARRI---LALDPEDVS 444
G+ EA E ++ +P + ++ C VE G F + + LDP+ V
Sbjct: 503 GQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPK-VD 561
Query: 445 SYVMLSNALSVAGK 458
Y + + LS AG+
Sbjct: 562 HYACMVDLLSRAGQ 575
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 104 IRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEAT 163
+ P T + + +L G+ +H + G + + + +++ Y K + +A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 164 RVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTG---R 220
+F +VVS+ ++I GYSQ G
Sbjct: 70 SIFNAIICKDVVSWNSLIT-------------------------------GYSQNGGISS 98
Query: 221 NEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNS 280
+ + LF EM + ++PN TL A +++ + +G+ HA VK D++V S
Sbjct: 99 SYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTS 158
Query: 281 LISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFF 329
L+ Y K G +ED L VF + ERN TW+ ++ GYA GR EEAI+ F
Sbjct: 159 LVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 236 LVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSL 295
L P+ STL + + L G++ H ++ + N L++FYAKCG + +
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 296 LVFDKLTERNIVTWNAVICGYAQNG---RGEEAIEFFERMRINGIRPNGVTLLGLLWA 350
+F+ + +++V+WN++I GY+QNG ++ F MR I PN TL G+ A
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 312 bits (800), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 261/452 (57%), Gaps = 33/452 (7%)
Query: 60 SVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSST 119
+ ++FDE+P +VVS +I +A+ +Y+EA+ LF M+ N+RP E T +V+ +
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 120 ALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTT 179
+ LG+Q+H W G SN+ + +A++DLY K +E A
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA----------------- 320
Query: 180 MICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPN 239
CGL F+ +P+++V+SWN +IGGY+ +EA+ LF EMLR G PN
Sbjct: 321 --CGL------------FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 366
Query: 240 HSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLD--VFVGNSLISFYAKCGSMEDSLLV 297
T+ + A A++ A+ +G+ H K L + + SLI YAKCG +E + V
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426
Query: 298 FDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLV 357
F+ + +++ +WNA+I G+A +GR + + + F RMR GI+P+ +T +GLL AC+H+G++
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML 486
Query: 358 EKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLG 417
+ G F + K EHY CM+DLL SG FKEA+E + + +P W +LL
Sbjct: 487 DLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLK 546
Query: 418 GCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRV 477
C++H NVELGE A ++ ++PE+ SYV+LSN + AG+W+ V+ R + +KGM +V
Sbjct: 547 ACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKV 606
Query: 478 PGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVL 509
PGCS IEI S VH F+ GD+ H N EIY +L
Sbjct: 607 PGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 221/411 (53%), Gaps = 5/411 (1%)
Query: 64 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALED 123
VF + + N++ T+ A A+ L+ M+ L + P+ +TF V+ S +
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICG 183
G+Q+H K+G +++V ++++ +Y++ +E+A +VF+ + + +VVSYT +I G
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 184 LLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTL 243
R E+A KLF E+P ++VVSWNAMI GY++TG +EA+ LF +M++ + P+ ST+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 244 PCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTE 303
+ A A ++ +G+ H ++ + N+LI Y+KCG +E + +F++L
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 304 RNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSY 363
+++++WN +I GY +EA+ F+ M +G PN VT+L +L AC H G ++ G
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 364 FSQAKLEDPGMLKPEHY-ACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIH 422
G+ ++D+ ++ G + A + +++ + W A++ G +H
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ-VFNSILHKSLSSWNAMIFGFAMH 448
Query: 423 --SNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKE 471
++ F+ R + + P+D+ ++V L +A S +G D +I R M +
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDI-TFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 39/260 (15%)
Query: 193 ALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAAN 252
A+ +F+ + N++ WN M G++ + A+ L++ M+ GL+PN T P + + A
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 253 IAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTER-------- 304
A G+ H +K LD++V SLIS Y + G +ED+ VFDK R
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 305 -----------------------NIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNG 341
++V+WNA+I GYA+ G +EA+E F+ M +RP+
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 342 VTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGM---LKPEHYACMVDLLSRSGRFKEAKE 398
T++ ++ AC +G +E G ++D G LK + ++DL S+ G + A
Sbjct: 267 STMVTVVSACAQSGSIELGRQV--HLWIDDHGFGSNLKIVN--ALIDLYSKCGELETACG 322
Query: 399 FLYDLPFDPGIGFWKALLGG 418
LP+ I W L+GG
Sbjct: 323 LFERLPYKDVIS-WNTLIGG 341
Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 43 AIRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLL 102
++RT + ++ + HQVF+ + ++ S +I FA + + LFSRM +
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 103 NIRPSEFTFGSVIPSSTALEDLNLGKQL 130
I+P + TF ++ + + L+LG+ +
Sbjct: 465 GIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 90/209 (43%), Gaps = 18/209 (8%)
Query: 297 VFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGL 356
VF + E N++ WN + G+A + A++ + M G+ PN T +L +C +
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 357 VEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALL 416
++G L+ L + ++ + ++GR ++A + P + + AL+
Sbjct: 150 FKEGQQIHGHV-LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY-TALI 207
Query: 417 GGCQIHSNVELGEFAARRILALDP-EDVSSYVMLSNALSVAGKWDNVSNIRREMKEKG-- 473
G +E A+++ P +DV S+ + + + G + + ++M +
Sbjct: 208 KGYASRGYIE----NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 474 ------MTRVPGCSW---IEIKSKVHVFV 493
+T V C+ IE+ +VH+++
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWI 292
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 310 bits (795), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 268/473 (56%), Gaps = 17/473 (3%)
Query: 62 HQVFDEVPDLNVVSATTIIGRFAKQHHYEE--AIYLFSRMLLLN-IRPSEFTFGSVIPSS 118
H++F+++P N S TII F++ + AI LF M+ + P+ FTF SV+ +
Sbjct: 79 HKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKAC 138
Query: 119 TALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVF------------ 166
+ GKQ+H A K G + FV S ++ +Y+ +++A +F
Sbjct: 139 AKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVM 198
Query: 167 --EDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEA 224
+ +V + MI G ++ + A LF +M R+VVSWN MI GYS G ++A
Sbjct: 199 TDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDA 258
Query: 225 VNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISF 284
V +F EM + + PN+ TL + A + + +L +G+ H A ++D +G++LI
Sbjct: 259 VEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 285 YAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTL 344
Y+KCG +E ++ VF++L N++TW+A+I G+A +G+ +AI+ F +MR G+RP+ V
Sbjct: 319 YSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAY 378
Query: 345 LGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLP 404
+ LL AC+H GLVE+G YFSQ D + EHY CMVDLL RSG EA+EF+ ++P
Sbjct: 379 INLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP 438
Query: 405 FDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSN 464
P WKALLG C++ NVE+G+ A ++ + P D +YV LSN + G W VS
Sbjct: 439 IKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSE 498
Query: 465 IRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIR 517
+R MKEK + + PGCS I+I +H FV D +H EI ++L ++++R
Sbjct: 499 MRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 146/316 (46%), Gaps = 55/316 (17%)
Query: 193 ALKLFQEMPHRNVVSWNAMIGGYSQTGRNEE--AVNLFIEMLREGLV-PNHSTLPCAIIA 249
A K+F +MP RN SWN +I G+S++ ++ A+ LF EM+ + V PN T P + A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 250 AANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMED---------------- 293
A + GK H A+K+ D FV ++L+ Y CG M+D
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 294 -----------------------------SLLVFDKLTERNIVTWNAVICGYAQNGRGEE 324
+ ++FDK+ +R++V+WN +I GY+ NG ++
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 325 AIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGM-LKPEHYACM 383
A+E F M+ IRPN VTL+ +L A + G +E G A ED G+ + + +
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA--EDSGIRIDDVLGSAL 315
Query: 384 VDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNV--ELGEFAARRILALDPE 441
+D+ S+ G ++A LP + I W A++ G IH + F R + P
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVIT-WSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 442 DVSSYVMLSNALSVAG 457
DV +Y+ L A S G
Sbjct: 375 DV-AYINLLTACSHGG 389
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 139/297 (46%), Gaps = 12/297 (4%)
Query: 60 SVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSST 119
+ +FD++ +VVS T+I ++ +++A+ +F M +IRP+ T SV+P+ +
Sbjct: 226 AARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAIS 285
Query: 120 ALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTT 179
L L LG+ LH +A G++ + +GSA++D+Y K IE+A VFE NV++++
Sbjct: 286 RLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSA 345
Query: 180 MICGLLKRERFEDALKLFQEMPHRNV----VSWNAMIGGYSQTGRNEEAVNLFIEMLR-E 234
MI G + DA+ F +M V V++ ++ S G EE F +M+ +
Sbjct: 346 MINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVD 405
Query: 235 GLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDS 294
GL P C + L + F + K D + +L+ G++E
Sbjct: 406 GLEPRIEHYGCMVDLLGRSGLLDEAEEF---ILNMPIKPDDVIWKALLGACRMQGNVEMG 462
Query: 295 LLVFDKLTE---RNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPN-GVTLLGL 347
V + L + + + A+ YA G E E RM+ IR + G +L+ +
Sbjct: 463 KRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDI 519
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 308 bits (788), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 158/452 (34%), Positives = 260/452 (57%), Gaps = 36/452 (7%)
Query: 57 KFSSVHQVFD--EVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSV 114
+ S VF+ +P+ +VS T I+ +A+ EA+ +FS+M ++++P SV
Sbjct: 169 RLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSV 228
Query: 115 IPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNV 174
+ + T L+DL G+ +HA K+GL+ DL I L+++
Sbjct: 229 LNAFTCLQDLKQGRSIHASVVKMGLEIEP-------DLLISLNTMYAK------------ 269
Query: 175 VSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLRE 234
CG + + LF +M N++ WNAMI GY++ G EA+++F EM+ +
Sbjct: 270 -------CGQVATAKI-----LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 235 GLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDS 294
+ P+ ++ AI A A + +L +S + + + DVF+ ++LI +AKCGS+E +
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 295 LLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHT 354
LVFD+ +R++V W+A+I GY +GR EAI + M G+ PN VT LGLL ACNH+
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
Query: 355 GLVEKGYSYFSQAKLEDPGM-LKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWK 413
G+V +G+ +F+ ++ D + + +HYAC++DLL R+G +A E + +P PG+ W
Sbjct: 438 GMVREGWWFFN--RMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495
Query: 414 ALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKG 473
ALL C+ H +VELGE+AA+++ ++DP + YV LSN + A WD V+ +R MKEKG
Sbjct: 496 ALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 555
Query: 474 MTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEI 505
+ + GCSW+E++ ++ F GD++H +EI
Sbjct: 556 LNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 191/387 (49%), Gaps = 39/387 (10%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALE 122
QVFD++P + II +++ +H+++A+ ++S M L + P FTF ++ + + L
Sbjct: 74 QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133
Query: 123 DLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMIC 182
L +G+ +HA ++G ++VFV + ++ LY K + A VFE
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE--------------- 178
Query: 183 GLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHST 242
GL +P R +VSW A++ Y+Q G EA+ +F +M + + P+
Sbjct: 179 GL--------------PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVA 224
Query: 243 LPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLT 302
L + A + L G+S HA VK +++ + SL + YAKCG + + ++FDK+
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK 284
Query: 303 ERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG-- 360
N++ WNA+I GYA+NG EAI+ F M +RP+ +++ + AC G +E+
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 361 -YSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGC 419
Y Y ++ D + + ++D+ ++ G + A+ ++D D + W A++ G
Sbjct: 345 MYEYVGRSDYRDDVFIS----SALIDMFAKCGSVEGAR-LVFDRTLDRDVVVWSAMIVGY 399
Query: 420 QIHSNVE--LGEFAARRILALDPEDVS 444
+H + + A + P DV+
Sbjct: 400 GLHGRAREAISLYRAMERGGVHPNDVT 426
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 154/333 (46%), Gaps = 43/333 (12%)
Query: 91 EAIYLFSRMLLLN--IRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSA 148
EA L S +L N I F + S+I S+T L KQ+HA +GLQ + F+ +
Sbjct: 3 EASCLASPLLYTNSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITK 58
Query: 149 ILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSW 208
++ I A +VF+D P + + +I G + F+DAL ++ M
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-------- 110
Query: 209 NAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVK 268
Q R + P+ T P + A + ++ L MG+ HA +
Sbjct: 111 --------QLAR---------------VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR 147
Query: 269 FLGKLDVFVGNSLISFYAKCGSMEDSLLVFD--KLTERNIVTWNAVICGYAQNGRGEEAI 326
DVFV N LI+ YAKC + + VF+ L ER IV+W A++ YAQNG EA+
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 327 EFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGM-LKPEHYACMVD 385
E F +MR ++P+ V L+ +L A +++G S A + G+ ++P+ +
Sbjct: 208 EIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI--HASVVKMGLEIEPDLLISLNT 265
Query: 386 LLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGG 418
+ ++ G+ AK L+D P + W A++ G
Sbjct: 266 MYAKCGQVATAK-ILFDKMKSPNLILWNAMISG 297
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 307 bits (787), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 262/468 (55%), Gaps = 4/468 (0%)
Query: 53 SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFG 112
+ SD VFD + +I F+ E ++ L+ RML + + +TF
Sbjct: 60 TSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFP 119
Query: 113 SVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNP 172
S++ + + L Q+HA TK+G +++V+ +++++ Y + + A +F+ P
Sbjct: 120 SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP 179
Query: 173 NVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEML 232
+ VS+ ++I G +K + + AL LF++M +N +SW MI GY Q N+EA+ LF EM
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 233 REGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSME 292
+ P++ +L A+ A A + AL GK H+ K ++D +G LI YAKCG ME
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 299
Query: 293 DSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACN 352
++L VF + ++++ W A+I GYA +G G EAI F M+ GI+PN +T +L AC+
Sbjct: 300 EALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACS 359
Query: 353 HTGLVEKGYSYFSQAKLEDPGMLKP--EHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIG 410
+TGLVE+G F +E LKP EHY C+VDLL R+G EAK F+ ++P P
Sbjct: 360 YTGLVEEGKLIFYS--MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 411 FWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMK 470
W ALL C+IH N+ELGE ++A+DP YV +N ++ KWD + RR MK
Sbjct: 418 IWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMK 477
Query: 471 EKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIRE 518
E+G+ +VPGCS I ++ H F+ GDR+H ++I + R ++ E
Sbjct: 478 EQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEE 525
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 158/347 (45%), Gaps = 32/347 (9%)
Query: 128 KQLHAWATKVGLQSNVFVGSAILDLYIKLSS---IEEATRVFEDTHNPNVVSYTTMICGL 184
KQ+HA K GL + + + L I +S + A VF+ P+ + MI G
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 185 LKRERFEDALKLFQEM-----PHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPN 239
+ E +L L+Q M PH N ++ +++ S EE + ++ + G +
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149
Query: 240 HSTLPCAIIAAAN--IAALGMGKSFHACAVKF--LGKLDVFVGNSLISFYAKCGSMEDSL 295
+ A N I + + +F + F + + D NS+I Y K G M+ +L
Sbjct: 150 --------VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIAL 201
Query: 296 LVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTG 355
+F K+ E+N ++W +I GY Q +EA++ F M+ + + P+ V+L L AC G
Sbjct: 202 TLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 261
Query: 356 LVEKG---YSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFW 412
+E+G +SY ++ ++ +L ++D+ ++ G +EA E ++ + W
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLG----CVLIDMYAKCGEMEEALEVFKNIK-KKSVQAW 316
Query: 413 KALLGGCQIHSNVE--LGEFAARRILALDPEDVSSYVMLSNALSVAG 457
AL+ G H + + +F + + + P +V ++ + A S G
Sbjct: 317 TALISGYAYHGHGREAISKFMEMQKMGIKP-NVITFTAVLTACSYTG 362
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 272/478 (56%), Gaps = 37/478 (7%)
Query: 44 IRTDSVSCGSESDKFSSVHQVFDEVPDL-NVVSATTIIGRFAKQHHYEEAIYLFSRMLLL 102
IRT + S+ ++F E+ + NVVS T +I F + EEA+ LFS M
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 103 NIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEA 162
+RP+EFT+ ++ TAL ++ ++HA K + + VG+A+LD Y+KL +EEA
Sbjct: 392 GVRPNEFTYSVIL---TALPVIS-PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 163 TRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNE 222
+V F + +++V+W+AM+ GY+QTG E
Sbjct: 448 AKV-------------------------------FSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 223 EAVNLFIEMLREGLVPNHSTLPCAI-IAAANIAALGMGKSFHACAVKFLGKLDVFVGNSL 281
A+ +F E+ + G+ PN T + + AA A++G GK FH A+K + V ++L
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536
Query: 282 ISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNG 341
++ YAK G++E + VF + E+++V+WN++I GYAQ+G+ +A++ F+ M+ ++ +G
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 342 VTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLY 401
VT +G+ AC H GLVE+G YF + EH +CMVDL SR+G+ ++A + +
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 402 DLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDN 461
++P G W+ +L C++H ELG AA +I+A+ PED ++YV+LSN + +G W
Sbjct: 657 NMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Query: 462 VSNIRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIREF 519
+ +R+ M E+ + + PG SWIE+K+K + F+ GDR+H + D+IY L + ++++
Sbjct: 717 RAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 774
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 143/297 (48%), Gaps = 31/297 (10%)
Query: 55 SDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSV 114
S + + H +FD+ P + S +++ F++ +EA LF + L + F SV
Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSV 99
Query: 115 IPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNV 174
+ S L D G+QLH K G +V VG++++D Y+K S+ ++ +VF++ NV
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 175 VSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLRE 234
V++TT+I GY++ N+E + LF+ M E
Sbjct: 160 VTWTTLI-------------------------------SGYARNSMNDEVLTLFMRMQNE 188
Query: 235 GLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDS 294
G PN T A+ A G G H VK + V NSLI+ Y KCG++ +
Sbjct: 189 GTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA 248
Query: 295 LLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWAC 351
++FDK +++VTWN++I GYA NG EA+ F MR+N +R + + ++ C
Sbjct: 249 RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 174/388 (44%), Gaps = 52/388 (13%)
Query: 39 LETPAIRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSR 98
L+ ++ T V + F +VFDE+ + NVV+ TT+I +A+ +E + LF R
Sbjct: 125 LDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMR 184
Query: 99 MLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSS 158
M +P+ FTF + + G Q+H K GL + V +++++LY+K
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK--- 241
Query: 159 IEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQT 218
CG +++ R LF + ++VV+WN+MI GY+
Sbjct: 242 -----------------------CGNVRKARI-----LFDKTEVKSVVTWNSMISGYAAN 273
Query: 219 GRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVG 278
G + EA+ +F M + + S+ I AN+ L + H VK+ D +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 279 NSLISFYAKCGSMEDSLLVFDKL-TERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGI 337
+L+ Y+KC +M D+L +F ++ N+V+W A+I G+ QN EEA++ F M+ G+
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 338 RPNGVTLLGLLWACN-------HTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRS 390
RPN T +L A H +V+ Y S ++D +
Sbjct: 394 RPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG------------TALLDAYVKL 441
Query: 391 GRFKEAKEFLYDLPFDPGIGFWKALLGG 418
G+ +EA + + D I W A+L G
Sbjct: 442 GKVEEAAKVFSGID-DKDIVAWSAMLAG 468
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 3/247 (1%)
Query: 173 NVVSYTTMIC-GLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEM 231
N V+ + C G + R +A LF + P R+ S+ +++ G+S+ GR +EA LF+ +
Sbjct: 25 NGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI 84
Query: 232 LREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSM 291
R G+ + S + +A + G+ H +KF DV VG SL+ Y K +
Sbjct: 85 HRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNF 144
Query: 292 EDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWAC 351
+D VFD++ ERN+VTW +I GYA+N +E + F RM+ G +PN T L
Sbjct: 145 KDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVL 204
Query: 352 NHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGF 411
G+ +G + P + +++L + G ++A+ L+D +
Sbjct: 205 AEEGVGGRGLQVHTVVVKNGLDKTIPVSNS-LINLYLKCGNVRKAR-ILFDKTEVKSVVT 262
Query: 412 WKALLGG 418
W +++ G
Sbjct: 263 WNSMISG 269
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 304 bits (779), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 169/468 (36%), Positives = 248/468 (52%), Gaps = 35/468 (7%)
Query: 53 SESDKFSSVHQVFDEVPDLNVVSATTII---GRFAKQHHYEEAIYLFSRMLLLNIRPSEF 109
++ D + +VFD +VV +I R Q EA+ +F M IRPS
Sbjct: 396 AKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLL 455
Query: 110 TFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDT 169
TF S++ +S +L L L KQ+H K GL ++F GSA++D+Y
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSN-------------- 501
Query: 170 HNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFI 229
C LK R +F EM +++V WN+M GY Q NEEA+NLF+
Sbjct: 502 ------------CYCLKDSRL-----VFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFL 544
Query: 230 EMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCG 289
E+ P+ T + AA N+A++ +G+ FH +K + + ++ N+L+ YAKCG
Sbjct: 545 ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG 604
Query: 290 SMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLW 349
S ED+ FD R++V WN+VI YA +G G++A++ E+M GI PN +T +G+L
Sbjct: 605 SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Query: 350 ACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGI 409
AC+H GLVE G F + L + EHY CMV LL R+GR +A+E + +P P
Sbjct: 665 ACSHAGLVEDGLKQF-ELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA 723
Query: 410 GFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREM 469
W++LL GC NVEL E AA + DP+D S+ MLSN + G W +R M
Sbjct: 724 IVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM 783
Query: 470 KEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIR 517
K +G+ + PG SWI I +VH+F++ D++H ++IY VL QIR
Sbjct: 784 KVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 162/321 (50%), Gaps = 38/321 (11%)
Query: 49 VSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSE 108
V CG + + H++F+ +P+ N++S TT++ + + ++EA+ LF+ M ++P
Sbjct: 295 VKCG----RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDM 350
Query: 109 FTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFED 168
+ S++ S +L L G Q+HA+ K L ++ +V ++++D+Y K + +A +VF+
Sbjct: 351 YACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 169 THNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRN---EEAV 225
+VV + M I GYS+ G EA+
Sbjct: 411 FAAADVVLFNAM-------------------------------IEGYSRLGTQWELHEAL 439
Query: 226 NLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFY 285
N+F +M + P+ T + A+A++ +LG+ K H K+ LD+F G++LI Y
Sbjct: 440 NIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVY 499
Query: 286 AKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLL 345
+ C ++DS LVFD++ +++V WN++ GY Q EEA+ F ++++ RP+ T
Sbjct: 500 SNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFA 559
Query: 346 GLLWACNHTGLVEKGYSYFSQ 366
++ A + V+ G + Q
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQ 580
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 144/290 (49%), Gaps = 34/290 (11%)
Query: 64 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALED 123
VFD +P+ + V+ TT+I K ++ LF +++ N+ P + +V+ + + L
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPF 264
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICG 183
L GKQ+HA + GL+ + + + ++D Y+K CG
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVK--------------------------CG 298
Query: 184 LLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTL 243
R A KLF MP++N++SW ++ GY Q ++EA+ LF M + GL P+
Sbjct: 299 -----RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYAC 353
Query: 244 PCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTE 303
+ + A++ ALG G HA +K D +V NSLI YAKC + D+ VFD
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 304 RNIVTWNAVICGYAQNGRG---EEAIEFFERMRINGIRPNGVTLLGLLWA 350
++V +NA+I GY++ G EA+ F MR IRP+ +T + LL A
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 178/364 (48%), Gaps = 46/364 (12%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHH--YEEAIYLFSRMLLLNI-RPSEFTFGSVIPSST 119
+VF+++P+ N+VS +T++ A HH YEE++ +F P+E+ S I + +
Sbjct: 100 KVFEKMPERNLVSWSTMVS--ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 120 ALEDLN--LGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSY 177
L+ + QL ++ K G +V+VG+ ++D Y+K +I+ A VF
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVF----------- 206
Query: 178 TTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLV 237
DAL P ++ V+W MI G + GR+ ++ LF +++ + +V
Sbjct: 207 --------------DAL------PEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV 246
Query: 238 PNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLV 297
P+ L + A + + L GK HA +++ ++D + N LI Y KCG + + +
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKL 306
Query: 298 FDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWAC---NHT 354
F+ + +NI++W ++ GY QN +EA+E F M G++P+ +L +C +
Sbjct: 307 FNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHAL 366
Query: 355 GLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKA 414
G + ++Y +A L + + ++D+ ++ +A++ ++D+ + + A
Sbjct: 367 GFGTQVHAYTIKANLGNDSYVTNS----LIDMYAKCDCLTDARK-VFDIFAAADVVLFNA 421
Query: 415 LLGG 418
++ G
Sbjct: 422 MIEG 425
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 13/233 (5%)
Query: 193 ALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLR-EGLVPNHSTLPCAIIAAA 251
A K+F++MP RN+VSW+ M+ + G EE++ +F+E R PN L I A +
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 252 NIAALG--MGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTW 309
+ G M + VK DV+VG LI FY K G+++ + LVFD L E++ VTW
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTW 217
Query: 310 NAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG---YSYFSQ 366
+I G + GR +++ F ++ + + P+G L +L AC+ +E G +++ +
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277
Query: 367 AKLE-DPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGG 418
LE D ++ ++D + GR A + +P + I W LL G
Sbjct: 278 YGLEMDASLMN-----VLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSG 324
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 272 KLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEA-IEFFE 330
+LD ++ N LI+ Y++ G M + VF+K+ ERN+V+W+ ++ +G EE+ + F E
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 331 RMRINGIRPNGVTLLGLLWACNHTGLVEKG-YSYFS-QAKLEDPGMLKPEHYAC-MVDLL 387
R PN L + AC +GL +G + F Q+ L G + + ++D
Sbjct: 136 FWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY 193
Query: 388 SRSGRFKEAKEFLYDLPFDPGIGFWKALLGGC 419
+ G A+ LP + W ++ GC
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVT-WTTMISGC 224
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 260/452 (57%), Gaps = 5/452 (1%)
Query: 70 DLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQ 129
++ +V+ +I + + Y+EA+ + RM+ I EFT+ SVI + L LGKQ
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 130 LHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRER 189
+HA+ + S F S ++ LY K +EA +FE ++VS+ ++ G +
Sbjct: 308 VHAYVLRREDFSFHFDNS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 190 FEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIA 249
+A +F+EM +N++SW MI G ++ G EE + LF M REG P AI +
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 250 AANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTW 309
A + A G+ +HA +K + GN+LI+ YAKCG +E++ VF + + V+W
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 310 NAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKL 369
NA+I Q+G G EA++ +E M GIRP+ +TLL +L AC+H GLV++G YF +
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS--M 544
Query: 370 EDPGMLKP--EHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVEL 427
E + P +HYA ++DLL RSG+F +A+ + LPF P W+ALL GC++H N+EL
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMEL 604
Query: 428 GEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKS 487
G AA ++ L PE +Y++LSN + G+W+ V+ +R+ M+++G+ + CSWIE+++
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664
Query: 488 KVHVFVTGDRNHHMNDEIYAVLRSCTEQIREF 519
+VH F+ D +H + +Y L+ +++R
Sbjct: 665 QVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRL 696
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 150/339 (44%), Gaps = 52/339 (15%)
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICG 183
L L + +H G Q + + ++D+Y K S + A ++F++ P+ ++ TTM+ G
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 184 LLKRERFEDALKLFQEMP--HRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHS 241
A +F++ P R+ V +NAMI G+S A+NLF +M EG P++
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 242 TLPCAIIAAANIA-ALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGS----MEDSLL 296
T + A +A FHA A+K V N+L+S Y+KC S + +
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 297 VFDKLTERNIVTWNAVICGYAQNG------------------------------RG--EE 324
VFD++ E++ +W ++ GY +NG RG +E
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 325 AIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYA--- 381
A+E RM +GI + T ++ AC GL++ G K +L+ E ++
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG-------KQVHAYVLRREDFSFHF 322
Query: 382 --CMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGG 418
+V L + G+F EA+ +P + W ALL G
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVS-WNALLSG 360
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 37/267 (13%)
Query: 64 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALED 123
+F E+ + N++S +I A+ EE + LFS M P ++ F I S L
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICG 183
G+Q HA K+G S++ G+A++ +Y K +EEA +V
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV------------------ 474
Query: 184 LLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTL 243
F+ MP + VSWNA+I Q G EAV+++ EML++G+ P+ TL
Sbjct: 475 -------------FRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521
Query: 244 PCAIIAAANIAALGMGKSFH---ACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDK 300
+ A ++ + G+ + + D + LI + G D+ V +
Sbjct: 522 LTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA--RLIDLLCRSGKFSDAESVIES 579
Query: 301 LTERNIV-TWNAVICGYAQNGRGEEAI 326
L + W A++ G +G E I
Sbjct: 580 LPFKPTAEIWEALLSGCRVHGNMELGI 606
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 69/179 (38%), Gaps = 33/179 (18%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALE 122
QVF +P L+ VS +I + H EA+ ++ ML IRP T +V+ + +
Sbjct: 473 QVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAG 532
Query: 123 DLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMIC 182
++ G++ S+E R+ P Y +I
Sbjct: 533 LVDQGRKY-------------------------FDSMETVYRI-----PPGADHYARLID 562
Query: 183 GLLKRERFEDALKLFQEMPHRNVVS-WNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNH 240
L + +F DA + + +P + W A++ G G E + ++ GL+P H
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GLIPEH 619
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 258/478 (53%), Gaps = 33/478 (6%)
Query: 42 PAIRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLL 101
P +R +S S S F ++FD D +VV+ T +I F + EA+ F M
Sbjct: 138 PFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKK 197
Query: 102 LNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVG-LQSNVFVGSAILDLYIKLSSIE 160
+ +E T SV+ ++ +ED+ G+ +H + G ++ +VF+GS+++D+Y K S
Sbjct: 198 TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC-- 255
Query: 161 EATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGR 220
++DA K+F EMP RNVV+W A+I GY Q+
Sbjct: 256 -----------------------------YDDAQKVFDEMPSRNVVTWTALIAGYVQSRC 286
Query: 221 NEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNS 280
++ + +F EML+ + PN TL + A A++ AL G+ H +K +++ G +
Sbjct: 287 FDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTT 346
Query: 281 LISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPN 340
LI Y KCG +E+++LVF++L E+N+ TW A+I G+A +G +A + F M + + PN
Sbjct: 347 LIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPN 406
Query: 341 GVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFL 400
VT + +L AC H GLVE+G F K K +HYACMVDL R G +EAK +
Sbjct: 407 EVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALI 466
Query: 401 YDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWD 460
+P +P W AL G C +H + ELG++AA R++ L P Y +L+N S + WD
Sbjct: 467 ERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWD 526
Query: 461 NVSNIRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHM-NDEIYAVLRSCTEQIR 517
V+ +R++MK++ + + PG SWIE+K K+ F+ D + +D++Y L + Q+R
Sbjct: 527 EVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 116/234 (49%), Gaps = 8/234 (3%)
Query: 189 RFEDALKLFQEMPHRNVVSWNAMIGGYSQ--TGRNEEAVNLFIEMLREGLVPNHSTLPCA 246
+F A +L ++ ++ W+++IG +S T + + M R G++P+ T P
Sbjct: 51 QFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPL 110
Query: 247 IIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNI 306
+ A + + FHA VKF D FV NSLIS Y+ G + + +FD ++++
Sbjct: 111 LKAVFKLRDSNPFQ-FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDV 169
Query: 307 VTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQ 366
VTW A+I G+ +NG EA+ +F M+ G+ N +T++ +L A V G S
Sbjct: 170 VTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSV--H 227
Query: 367 AKLEDPGMLKPEHY--ACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGG 418
+ G +K + + + +VD+ + + +A++ ++P + W AL+ G
Sbjct: 228 GLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALIAG 280
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 301 bits (772), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 157/467 (33%), Positives = 262/467 (56%), Gaps = 32/467 (6%)
Query: 53 SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFG 112
S+ S VF E+ D +VVS T++I +A++ EA+ LF M I P +T
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 113 SVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNP 172
+V+ L+ GK++H W + L ++FV +A++D+Y K S++EA VF
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF------ 455
Query: 173 NVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEML 232
EM ++++SWN +IGGYS+ EA++LF +L
Sbjct: 456 -------------------------SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 233 REG-LVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSM 291
E P+ T+ C + A A+++A G+ H ++ D V NSL+ YAKCG++
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 292 EDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWAC 351
+ ++FD + +++V+W +I GY +G G+EAI F +MR GI + ++ + LL+AC
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 352 NHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGF 411
+H+GLV++G+ +F+ + E EHYAC+VD+L+R+G +A F+ ++P P
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670
Query: 412 WKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKE 471
W ALL GC+IH +V+L E A ++ L+PE+ YV+++N + A KW+ V +R+ + +
Sbjct: 671 WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 730
Query: 472 KGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIRE 518
+G+ + PGCSWIEIK +V++FV GD ++ + I A LR ++ E
Sbjct: 731 RGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIE 777
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 172/356 (48%), Gaps = 33/356 (9%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALE 122
+VFDEV + ++ AK + +I LF +M+ + +TF V S ++L
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 123 DLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMIC 182
++ G+QLH + K G VG++++ Y
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFY----------------------------- 240
Query: 183 GLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHST 242
LK +R + A K+F EM R+V+SWN++I GY G E+ +++F++ML G+ + +T
Sbjct: 241 --LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLAT 298
Query: 243 LPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLT 302
+ A+ + +G++ H+ VK + N+L+ Y+KCG ++ + VF +++
Sbjct: 299 IVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
Query: 303 ERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYS 362
+R++V++ ++I GYA+ G EA++ FE M GI P+ T+ +L C L+++G
Sbjct: 359 DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 418
Query: 363 YFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGG 418
K D G A M D+ ++ G +EA+ ++ I W ++GG
Sbjct: 419 VHEWIKENDLGFDIFVSNALM-DMYAKCGSMQEAELVFSEMRVKDIIS-WNTIIGG 472
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 158/351 (45%), Gaps = 39/351 (11%)
Query: 70 DLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQ 129
D +V A T + RF + + E A+ L +I P T SV+ + L GK+
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 130 LHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRER 189
+ + G + +GS + +Y ++EA+RVF++ +
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV-------------------K 156
Query: 190 FEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIA 249
E AL WN ++ +++G ++ LF +M+ G+ + T C +
Sbjct: 157 IEKAL------------FWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKS 204
Query: 250 AANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTW 309
+++ ++ G+ H +K VGNSL++FY K ++ + VFD++TER++++W
Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW 264
Query: 310 NAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKL 369
N++I GY NG E+ + F +M ++GI + T++ + C + L+ G + S +
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS---I 321
Query: 370 EDPGMLKPEHYAC--MVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGG 418
E C ++D+ S+ G AK ++ D + + +++ G
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAG 371
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 301 bits (771), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 269/483 (55%), Gaps = 49/483 (10%)
Query: 53 SESDKFSSVHQVFDEVPD----LNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSE 108
S+ +F ++F+++ + ++VV+ + I +A++ EA+ + +ML I+P+E
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 109 FTFGSVIPSSTALEDLNLGKQLHAWATK--VGLQSNV-----FVGSAILDLYIKLSSIEE 161
T SV+ ++ L GK++H +A K + L+ N V + ++D+Y K ++
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDT 425
Query: 162 ATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRN 221
A +F D+ +P R+VV+W MIGGYSQ G
Sbjct: 426 ARAMF-DSLSPK----------------------------ERDVVTWTVMIGGYSQHGDA 456
Query: 222 EEAVNLFIEMLREGLV--PNHSTLPCAIIAAANIAALGMGKSFHACAVKFL-GKLDVFVG 278
+A+ L EM E PN T+ CA++A A++AAL +GK HA A++ + +FV
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 279 NSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIR 338
N LI YAKCGS+ D+ LVFD + +N VTW +++ GY +G GEEA+ F+ MR G +
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFK 576
Query: 339 PNGVTLLGLLWACNHTGLVEKGYSYFSQAKLE---DPGMLKPEHYACMVDLLSRSGRFKE 395
+GVTLL +L+AC+H+G++++G YF++ K PG PEHYAC+VDLL R+GR
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPG---PEHYACLVDLLGRAGRLNA 633
Query: 396 AKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSV 455
A + ++P +P W A L C+IH VELGE+AA +I L SY +LSN +
Sbjct: 634 ALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYAN 693
Query: 456 AGKWDNVSNIRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQ 515
AG+W +V+ IR M+ KG+ + PGCSW+E F GD+ H EIY VL ++
Sbjct: 694 AGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQR 753
Query: 516 IRE 518
I++
Sbjct: 754 IKD 756
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/436 (31%), Positives = 215/436 (49%), Gaps = 20/436 (4%)
Query: 53 SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRML-LLNIRPSEFTF 111
S S +VFDE+ +VVS +II +AK + A+ +FSRM RP T
Sbjct: 173 SRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITL 232
Query: 112 GSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHN 171
+V+P +L +LGKQLH +A + N+FVG+ ++D+Y K ++EA VF +
Sbjct: 233 VNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSV 292
Query: 172 PNVVSYTTMICGLLKRERFEDALKLFQEMPHR----NVVSWNAMIGGYSQTGRNEEAVNL 227
+VVS+ M+ G + RFEDA++LF++M +VV+W+A I GY+Q G EA+ +
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 228 FIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKL-------DVFVGNS 280
+ML G+ PN TL + A++ AL GK H A+K+ L + V N
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ 412
Query: 281 LISFYAKCGSMEDSLLVFDKLT--ERNIVTWNAVICGYAQNGRGEEAIEFFERM--RING 336
LI YAKC ++ + +FD L+ ER++VTW +I GY+Q+G +A+E M
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 337 IRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEA 396
RPN T+ L AC + G + A + C++D+ ++ G +A
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 397 KEFLYDLPFDPGIGFWKALLGGCQIHSNVE--LGEFAARRILALDPEDVSSYVMLSNALS 454
+ ++D W +L+ G +H E LG F R + + V+ V+L A S
Sbjct: 533 R-LVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY-ACS 590
Query: 455 VAGKWDNVSNIRREMK 470
+G D MK
Sbjct: 591 HSGMIDQGMEYFNRMK 606
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 146/295 (49%), Gaps = 37/295 (12%)
Query: 70 DLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQ 129
D V ++I + + +YLF M L+ P +TF V + + + G+
Sbjct: 89 DAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGES 148
Query: 130 LHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRER 189
HA + G SNVFVG+A++ +Y + S+ +A +VF++ +VVS
Sbjct: 149 AHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS------------- 195
Query: 190 FEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLRE-GLVPNHSTLPCAII 248
WN++I Y++ G+ + A+ +F M E G P++ TL +
Sbjct: 196 ------------------WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 249 AAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVT 308
A++ +GK H AV ++FVGN L+ YAKCG M+++ VF ++ +++V+
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 309 WNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSY 363
WNA++ GY+Q GR E+A+ FE+M+ I+ + VT W+ +G ++G Y
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT-----WSAAISGYAQRGLGY 347
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/458 (35%), Positives = 256/458 (55%), Gaps = 3/458 (0%)
Query: 64 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALED 123
VFD +P+ +VVS T++ +A+ + EA++ + I+ +EF+F ++ +
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICG 183
L L +Q H G SNV + +I+D Y K +E A R F++ ++ +TT+I G
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 184 LLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTL 243
K E A KLF EMP +N VSW A+I GY + G A++LF +M+ G+ P T
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 244 PCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTE 303
+ A+A+IA+L GK H ++ + + V +SLI Y+K GS+E S VF +
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 304 R-NIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYS 362
+ + V WN +I AQ+G G +A+ + M ++PN TL+ +L AC+H+GLVE+G
Sbjct: 375 KHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLR 434
Query: 363 YFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIH 422
+F ++ + EHYAC++DLL R+G FKE + ++PF+P W A+LG C+IH
Sbjct: 435 WFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIH 494
Query: 423 SNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSW 482
N ELG+ AA ++ LDPE + Y++LS+ + GKW+ V +R MK++ + + SW
Sbjct: 495 GNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSW 554
Query: 483 IEIKSKVHVFVTGD--RNHHMNDEIYAVLRSCTEQIRE 518
IEI+ KV F D H +EIY +L + I E
Sbjct: 555 IEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEE 592
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 178/427 (41%), Gaps = 52/427 (12%)
Query: 73 VVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHA 132
+ A + + + A + +A+ + IR S++ + L GK +H
Sbjct: 11 ICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHR 70
Query: 133 WATKVGLQS-NVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFE 191
G + N + + ++ +Y+K +A +VF+ H N+ S+ M+ G +K
Sbjct: 71 HLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLV 130
Query: 192 DALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAA 251
A +F MP R+VVSWN M+ GY+Q G EA+ + E R G+ N + + A
Sbjct: 131 RARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACV 190
Query: 252 NIAALGMGKSFHACAVKFLGKL-DVFVGNSLISFYAKCGSMEDSLLVFDKLT-------- 302
L + + H V G L +V + S+I YAKCG ME + FD++T
Sbjct: 191 KSRQLQLNRQAHG-QVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWT 249
Query: 303 -----------------------ERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRP 339
E+N V+W A+I GY + G G A++ F +M G++P
Sbjct: 250 TLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKP 309
Query: 340 NGVTLLGLLWACNHTGLVEKG---YSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEA 396
T L A + G + Y + + ++ + ++D+ S+SG EA
Sbjct: 310 EQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV----ISSLIDMYSKSGSL-EA 364
Query: 397 KEFLYDLPFDP-GIGFWKALLGGCQIHSNVELGEFAARRI-----LALDPEDVSSYVMLS 450
E ++ + D FW ++ H LG A R + + P + V+L
Sbjct: 365 SERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDMIKFRVQPNRTTLVVIL- 420
Query: 451 NALSVAG 457
NA S +G
Sbjct: 421 NACSHSG 427
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 111/214 (51%), Gaps = 14/214 (6%)
Query: 44 IRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLN 103
I T +S ++ + ++F E+P+ N VS T +I + +Q A+ LF +M+ L
Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 104 IRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEAT 163
++P +FTF S + +S ++ L GK++H + + ++ N V S+++D+Y K S+E +
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASE 366
Query: 164 RVF---EDTHNPNVVSYTTMICGLLKRERFEDALKLFQEM------PHRNVVSWNAMIGG 214
RVF +D H + V + TMI L + AL++ +M P+R + ++
Sbjct: 367 RVFRICDDKH--DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV--VILNA 422
Query: 215 YSQTGRNEEAVNLFIEM-LREGLVPNHSTLPCAI 247
S +G EE + F M ++ G+VP+ C I
Sbjct: 423 CSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLI 456
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 252/468 (53%), Gaps = 35/468 (7%)
Query: 51 CGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFT 110
CGS + Q+FD + + NVVS ++I + + + +EA+ +F +ML ++P++ +
Sbjct: 284 CGS----LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 111 FGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTH 170
+ + L DL G+ +H + ++GL NV V ++++ +Y K ++ A
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA------- 392
Query: 171 NPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIE 230
+F ++ R +VSWNAMI G++Q GR +A+N F +
Sbjct: 393 ------------------------SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 231 MLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGS 290
M + P+ T I A A ++ K H ++ +VFV +L+ YAKCG+
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 291 MEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWA 350
+ + L+FD ++ER++ TWNA+I GY +G G+ A+E FE M+ I+PNGVT L ++ A
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 351 CNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIG 410
C+H+GLVE G F K L +HY MVDLL R+GR EA +F+ +P P +
Sbjct: 549 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
Query: 411 FWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMK 470
+ A+LG CQIH NV E AA R+ L+P+D +V+L+N A W+ V +R M
Sbjct: 609 VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML 668
Query: 471 EKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIRE 518
+G+ + PGCS +EIK++VH F +G H + +IYA L I+E
Sbjct: 669 RQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 716
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 186/363 (51%), Gaps = 39/363 (10%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALE 122
+VFD +P+ ++VS TI+ +++ A+ + M N++PS T SV+P+ +AL
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 123 DLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMIC 182
+++GK++H +A + G S V + +A++D+Y K C
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAK--------------------------C 284
Query: 183 GLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHST 242
G L E A +LF M RNVVSWN+MI Y Q +EA+ +F +ML EG+ P +
Sbjct: 285 GSL-----ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 243 LPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLT 302
+ A+ A A++ L G+ H +V+ +V V NSLIS Y KC ++ + +F KL
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 303 ERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG-- 360
R +V+WNA+I G+AQNGR +A+ +F +MR ++P+ T + ++ A +
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 361 -YSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGC 419
+ ++ L+ + +VD+ ++ G A+ ++D+ + + W A++ G
Sbjct: 460 IHGVVMRSCLDKNVFVT----TALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDGY 514
Query: 420 QIH 422
H
Sbjct: 515 GTH 517
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 150/299 (50%), Gaps = 33/299 (11%)
Query: 63 QVFDEV-PDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTAL 121
+VF+ + LNV+ T + G FAK ++A+ F RM ++ P + F ++
Sbjct: 90 RVFEPIDSKLNVLYHTMLKG-FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 148
Query: 122 EDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMI 181
+L +GK++H K G ++F + + ++Y K + EA +VF+
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD-------------- 194
Query: 182 CGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHS 241
MP R++VSWN ++ GYSQ G A+ + M E L P+
Sbjct: 195 -----------------RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237
Query: 242 TLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKL 301
T+ + A + + + +GK H A++ V + +L+ YAKCGS+E + +FD +
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 302 TERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG 360
ERN+V+WN++I Y QN +EA+ F++M G++P V+++G L AC G +E+G
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 141/319 (44%), Gaps = 35/319 (10%)
Query: 128 KQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKR 187
+Q+ K GL F + ++ L+ + S++EA RVFE + V Y TM+
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML------ 107
Query: 188 ERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAI 247
G+++ ++A+ F+ M + + P +
Sbjct: 108 -------------------------KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLL 142
Query: 248 IAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIV 307
+ A L +GK H VK LD+F L + YAKC + ++ VFD++ ER++V
Sbjct: 143 KVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLV 202
Query: 308 TWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQA 367
+WN ++ GY+QNG A+E + M ++P+ +T++ +L A + L+ G A
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 368 KLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVEL 427
L A +VD+ ++ G + A++ L+D + + W +++ + N +
Sbjct: 263 MRSGFDSLVNISTA-LVDMYAKCGSLETARQ-LFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 428 GEFAARRIL--ALDPEDVS 444
+++L + P DVS
Sbjct: 321 AMLIFQKMLDEGVKPTDVS 339
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 300 bits (767), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 264/455 (58%), Gaps = 11/455 (2%)
Query: 72 NVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLH 131
N++ + + Q H ++YL RM + P TF ++PS L LG++ H
Sbjct: 28 NIIIRAIVHNVSSPQRHSPISVYL--RMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 132 AWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFE 191
A GL + FV +++L++Y + A RVF+D+ + ++ ++ +++ K +
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 192 DALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEML----REGLV-PNHSTLPCA 246
DA KLF EMP RNV+SW+ +I GY G+ +EA++LF EM E V PN T+
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 247 IIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKL-TERN 305
+ A + AL GK HA K+ ++D+ +G +LI YAKCGS+E + VF+ L ++++
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 306 IVTWNAVICGYAQNGRGEEAIEFFERMRI-NGIRPNGVTLLGLLWACNHTGLVEKGYSYF 364
+ ++A+IC A G +E + F M + I PN VT +G+L AC H GL+ +G SYF
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 365 SQAKLEDPGMLKP-EHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHS 423
+ +E+ G+ +HY CMVDL RSG KEA+ F+ +P +P + W +LL G ++
Sbjct: 326 -KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Query: 424 NVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWI 483
+++ E A +R++ LDP + +YV+LSN + G+W V IR EM+ KG+ +VPGCS++
Sbjct: 385 DIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYV 444
Query: 484 EIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIRE 518
E++ VH FV GD + ++ IYA+L +++RE
Sbjct: 445 EVEGVVHEFVVGDESQQESERIYAMLDEIMQRLRE 479
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 18/290 (6%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLN-----IRPSEFTFGSVIPS 117
++FDE+P+ NV+S + +I + Y+EA+ LF M L +RP+EFT +V+ +
Sbjct: 149 KLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSA 208
Query: 118 STALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDT-HNPNVVS 176
L L GK +HA+ K ++ ++ +G+A++D+Y K S+E A RVF +V +
Sbjct: 209 CGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKA 268
Query: 177 YTTMICGLLKRERFEDALKLFQEMP-----HRNVVSWNAMIGGYSQTGRNEEAVNLFIEM 231
Y+ MIC L ++ +LF EM + N V++ ++G G E + F M
Sbjct: 269 YSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMM 328
Query: 232 LRE-GLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGS 290
+ E G+ P+ C + + +SF A + DV + SL+S G
Sbjct: 329 IEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA---SMPMEPDVLIWGSLLSGSRMLGD 385
Query: 291 MEDSLLVFDKLTERNIVTWNAVIC---GYAQNGRGEEAIEFFERMRINGI 337
++ +L E + + A + YA+ GR E M + GI
Sbjct: 386 IKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGI 435
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 299 bits (765), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/458 (36%), Positives = 258/458 (56%), Gaps = 10/458 (2%)
Query: 62 HQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTAL 121
HQ D PDL + +A I + ++A L+ ++L I P+EFTF S++ S +
Sbjct: 88 HQTID--PDLFLFTAA--INTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST- 142
Query: 122 EDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMI 181
GK +H K GL + +V + ++D+Y K + A +VF+ ++VS T MI
Sbjct: 143 ---KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMI 199
Query: 182 CGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLV-PNH 240
K+ E A LF M R++VSWN MI GY+Q G +A+ LF ++L EG P+
Sbjct: 200 TCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDE 259
Query: 241 STLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDK 300
T+ A+ A + I AL G+ H +L+V V LI Y+KCGS+E+++LVF+
Sbjct: 260 ITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFND 319
Query: 301 LTERNIVTWNAVICGYAQNGRGEEAIEFFERMR-INGIRPNGVTLLGLLWACNHTGLVEK 359
++IV WNA+I GYA +G ++A+ F M+ I G++P +T +G L AC H GLV +
Sbjct: 320 TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNE 379
Query: 360 GYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGC 419
G F E K EHY C+V LL R+G+ K A E + ++ D W ++LG C
Sbjct: 380 GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSC 439
Query: 420 QIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPG 479
++H + LG+ A ++ L+ ++ YV+LSN + G ++ V+ +R MKEKG+ + PG
Sbjct: 440 KLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPG 499
Query: 480 CSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIR 517
S IEI++KVH F GDR H + EIY +LR +E+I+
Sbjct: 500 ISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIK 537
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 38/244 (15%)
Query: 42 PAIRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLL 101
P + T V ++ S +VFD +P+ ++VS+T +I +AKQ + E A LF M
Sbjct: 161 PYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCE 220
Query: 102 LNI--------------------------------RPSEFTFGSVIPSSTALEDLNLGKQ 129
+I +P E T + + + + + L G+
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 130 LHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRER 189
+H + ++ NV V + ++D+Y K S+EEA VF DT ++V++ MI G
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 190 FEDALKLFQEMP-----HRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLRE-GLVPNHSTL 243
+DAL+LF EM +++ + + G E + +F M +E G+ P
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 244 PCAI 247
C +
Sbjct: 401 GCLV 404
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 87/226 (38%), Gaps = 44/226 (19%)
Query: 285 YAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTL 344
YA G + SL +F + + ++ + A I + NG ++A + ++ + I PN T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 345 LGLLWACN----------------------HTGLVE---KGYSYFSQAKLEDPGMLKPEH 379
LL +C+ TGLV+ KG S K+ D PE
Sbjct: 134 SSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDR---MPER 190
Query: 380 ----YACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRI 435
M+ ++ G EA L+D + I W ++ G H +++
Sbjct: 191 SLVSSTAMITCYAKQGNV-EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 436 LA---LDPEDVSSYVMLSNALSVA----GKWDNV----SNIRREMK 470
LA P++++ LS + G+W +V S IR +K
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK 295
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 286/509 (56%), Gaps = 11/509 (2%)
Query: 12 LSLNKLSKLHSLAPNYLIETQKASVQKLETPAIRTDSVSCGSESDKFSSVHQVFDEVPDL 71
++LN++ ++H ++ + KL IRT + G D ++ +V + V
Sbjct: 60 INLNQIKQIHGHVLRKGLDQSCYILTKL----IRTLT-KLGVPMDPYA--RRVIEPVQFR 112
Query: 72 NVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLH 131
N T +I +A + ++EAI ++ M I P FTF +++ + ++DLNLG+Q H
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH 172
Query: 132 AWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFE 191
A ++ V+VG+ ++D+Y+K SI+ A +VF++ +V+S+T +I + E
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 192 DALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAA 251
A +LF+ +P +++V+W AM+ G++Q + +EA+ F M + G+ + T+ I A A
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292
Query: 252 NIAALGMGKSFHACAVK--FLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTW 309
+ A A K + V +G++LI Y+KCG++E+++ VF + +N+ T+
Sbjct: 293 QLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTY 352
Query: 310 NAVICGYAQNGRGEEAIEFFERMRING-IRPNGVTLLGLLWACNHTGLVEKGYSYFSQAK 368
+++I G A +GR +EA+ F M I+PN VT +G L AC+H+GLV++G F
Sbjct: 353 SSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMY 412
Query: 369 LEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELG 428
+HY CMVDLL R+GR +EA E + + +P G W ALLG C+IH+N E+
Sbjct: 413 QTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIA 472
Query: 429 EFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKS- 487
E AA + L+P+ + +Y++LSN + AG W V +R+ +KEKG+ + P SW+ K+
Sbjct: 473 EIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNG 532
Query: 488 KVHVFVTGDRNHHMNDEIYAVLRSCTEQI 516
++H F G+ NH M+++I L E++
Sbjct: 533 QMHKFFPGNLNHPMSNKIQDKLEELVERL 561
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 296 bits (758), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 263/463 (56%), Gaps = 34/463 (7%)
Query: 58 FSSVHQVFDEVPD-LNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLN-IRPSEFTFGSVI 115
S H+VF ++ +NV T+I +A+ + A L+ M + + P T+ +I
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 116 PSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVV 175
+ T + D+ LG+ +H+ + G S ++V +++L LY
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYAN-------------------- 168
Query: 176 SYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREG 235
CG A K+F +MP +++V+WN++I G+++ G+ EEA+ L+ EM +G
Sbjct: 169 ------CG-----DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 236 LVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSL 295
+ P+ T+ + A A I AL +GK H +K ++ N L+ YA+CG +E++
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 277
Query: 296 LVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMR-INGIRPNGVTLLGLLWACNHT 354
+FD++ ++N V+W ++I G A NG G+EAIE F+ M G+ P +T +G+L+AC+H
Sbjct: 278 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHC 337
Query: 355 GLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKA 414
G+V++G+ YF + + E + EH+ CMVDLL+R+G+ K+A E++ +P P + W+
Sbjct: 338 GMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 397
Query: 415 LLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGM 474
LLG C +H + +L EFA +IL L+P YV+LSN + +W +V IR++M G+
Sbjct: 398 LLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGV 457
Query: 475 TRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIR 517
+VPG S +E+ ++VH F+ GD++H +D IYA L+ T ++R
Sbjct: 458 KKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 500
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 296 bits (757), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 252/457 (55%), Gaps = 31/457 (6%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALE 122
QVFD + + ++VS T+IG + + EA+ +F M + SEFT SV+ +
Sbjct: 117 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 176
Query: 123 DLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMIC 182
D K+LH + K + N++VG+A+LDLY K C
Sbjct: 177 DALECKKLHCLSVKTCIDLNLYVGTALLDLYAK--------------------------C 210
Query: 183 GLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHST 242
G++K DA+++F+ M ++ V+W++M+ GY Q EEA+ L+ R L N T
Sbjct: 211 GMIK-----DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265
Query: 243 LPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLT 302
L I A +N+AAL GK HA K +VFV +S + YAKCGS+ +S ++F ++
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 325
Query: 303 ERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYS 362
E+N+ WN +I G+A++ R +E + FE+M+ +G+ PN VT LL C HTGLVE+G
Sbjct: 326 EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRR 385
Query: 363 YFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIH 422
+F + HY+CMVD+L R+G EA E + +PFDP W +LL C+++
Sbjct: 386 FFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVY 445
Query: 423 SNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSW 482
N+EL E AA ++ L+PE+ ++V+LSN + +W+ ++ R+ +++ + +V G SW
Sbjct: 446 KNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSW 505
Query: 483 IEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIREF 519
I+IK KVH F G+ H EI + L + + R+F
Sbjct: 506 IDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKF 542
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 145/293 (49%), Gaps = 17/293 (5%)
Query: 182 CGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHS 241
CG + E A ++F M R++VSWN MIG Y++ EA+++F+EM EG +
Sbjct: 109 CGFV-----ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEF 163
Query: 242 TLPCAIIAAA-NIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDK 300
T+ + A N AL K H +VK L+++VG +L+ YAKCG ++D++ VF+
Sbjct: 164 TISSVLSACGVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFES 222
Query: 301 LTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG 360
+ +++ VTW++++ GY QN EEA+ + R + + N TL ++ AC++ + +G
Sbjct: 223 MQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG 282
Query: 361 YSYFSQAKLEDPGMLKPEHYA-CMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGC 419
A + G A VD+ ++ G +E+ ++ + + W ++ G
Sbjct: 283 KQM--HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGF 339
Query: 420 QIHSNVE--LGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMK 470
H+ + + F + + P +V+ S+ LSV G V RR K
Sbjct: 340 AKHARPKEVMILFEKMQQDGMHPNEVT----FSSLLSVCGHTGLVEEGRRFFK 388
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 6/186 (3%)
Query: 251 ANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWN 310
A A+ K+ H ++ + DV + N LI+ Y+KCG +E + VFD + ER++V+WN
Sbjct: 72 ARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWN 131
Query: 311 AVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWAC--NHTGLVEKGYSYFSQAK 368
+I Y +N EA++ F MR G + + T+ +L AC N L K S
Sbjct: 132 TMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKT 191
Query: 369 LEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELG 428
D + ++DL ++ G K+A + + D W +++ G + N E
Sbjct: 192 CIDLNLYVG---TALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKNYEEA 247
Query: 429 EFAARR 434
RR
Sbjct: 248 LLLYRR 253
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 295 bits (754), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 277/545 (50%), Gaps = 85/545 (15%)
Query: 48 SVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPS 107
S+ CG QVFD + + ++V+ ++I K +EA+ ++ M+ N+ P
Sbjct: 109 SLKCGD----IDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPD 164
Query: 108 EFTFGSVIPSSTALEDLNLGKQL---HAWATKVGLQ-SNVFVGSAILDLYIKLSSIEEAT 163
E+T SV A DL+L K+ H A +GL+ SNVFVGSA++D+Y+K EA
Sbjct: 165 EYTLSSVFK---AFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAK 221
Query: 164 RVF----------------------EDTH-------------NPNVVSYTT--------- 179
V EDT PN +Y +
Sbjct: 222 LVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLK 281
Query: 180 ------MICGLLKRERFE--------------------DALKLFQEMPHRNVVSWNAMIG 213
+I GL+ + FE D+L++F+ + + N VSW ++I
Sbjct: 282 DIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLIS 341
Query: 214 GYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKL 273
G Q GR E A+ F +M+R+ + PN TL A+ +N+A G+ H K+
Sbjct: 342 GLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR 401
Query: 274 DVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMR 333
D + G+ LI Y KCG + + LVFD L+E ++++ N +I YAQNG G EA++ FERM
Sbjct: 402 DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI 461
Query: 334 INGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRF 393
G++PN VT+L +L ACN++ LVE+G F + +D ML +HYACMVDLL R+GR
Sbjct: 462 NLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR-KDKIMLTNDHYACMVDLLGRAGRL 520
Query: 394 KEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNAL 453
+EA E L +P + W+ LL C++H VE+ E R+IL ++P D + +++SN
Sbjct: 521 EEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLY 579
Query: 454 SVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCT 513
+ GKW+ V ++ +MK+ + + P SW+EI + H F+ GD H N E +L +
Sbjct: 580 ASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSE--QILENLE 637
Query: 514 EQIRE 518
E I++
Sbjct: 638 ELIKK 642
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Query: 172 PNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEM 231
P +S + ++ LK + A ++F M R++V+WN++I + R++EAV ++ M
Sbjct: 97 PAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLM 156
Query: 232 LREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKF-LGKLDVFVGNSLISFYAKCGS 290
+ ++P+ TL A ++++ + H AV L +VFVG++L+ Y K G
Sbjct: 157 ITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 291 MEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWA 350
++ LV D++ E+++V A+I GY+Q G EA++ F+ M + ++PN T +L +
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 351 CNH 353
C +
Sbjct: 277 CGN 279
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%)
Query: 278 GNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGI 337
G+ L+ KCG ++ + VFD ++ER+IVTWN++I ++ R +EA+E + M N +
Sbjct: 102 GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNV 161
Query: 338 RPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAK 397
P+ TL + A + L ++ A + + + +VD+ + G+ +EAK
Sbjct: 162 LPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAK 221
Query: 398 EFL 400
L
Sbjct: 222 LVL 224
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 258/466 (55%), Gaps = 32/466 (6%)
Query: 60 SVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRM-----LLLNIRPSEFTFGSV 114
S +VFD + D + +I +++ H +EA+ LF M LL N T V
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN----STTMAGV 411
Query: 115 IPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNV 174
+P+ + + +H + K GL + FV + ++D+Y +L I+ A R+F + ++
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 175 VSYTTMICGLLKRERFEDALKLFQEMPH-RNVVSWNAMIGGYSQTGRNEEAVNLFIEMLR 233
V++ TMI G + E EDAL L +M + VS A R
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGAS---------------------R 510
Query: 234 EGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMED 293
L PN TL + + A ++AL GK HA A+K DV VG++L+ YAKCG ++
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 294 SLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNH 353
S VFD++ ++N++TWN +I Y +G G+EAI+ M + G++PN VT + + AC+H
Sbjct: 571 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630
Query: 354 TGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFD-PGIGFW 412
+G+V++G F K + +HYAC+VDLL R+GR KEA + + +P D G W
Sbjct: 631 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 690
Query: 413 KALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEK 472
+LLG +IH+N+E+GE AA+ ++ L+P S YV+L+N S AG WD + +RR MKE+
Sbjct: 691 SSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ 750
Query: 473 GMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIRE 518
G+ + PGCSWIE +VH FV GD +H ++++ L + E++R+
Sbjct: 751 GVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRK 796
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 170/367 (46%), Gaps = 48/367 (13%)
Query: 72 NVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLH 131
++V+ T++ + EA+ M+L + P EFT SV+P+ + LE L GK+LH
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 132 AWATKVG-LQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERF 190
A+A K G L N FVGSA++D+Y + RVF+ + + + MI G
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG------- 378
Query: 191 EDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLRE-GLVPNHSTLPCAIIA 249
YSQ ++EA+ LFI M GL+ N +T+ + A
Sbjct: 379 ------------------------YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 250 AANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTW 309
A ++ H VK D FV N+L+ Y++ G ++ ++ +F K+ +R++VTW
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 310 NAVICGYAQNGRGEEAIEFFERM------------RINGIRPNGVTLLGLLWACNHTGLV 357
N +I GY + E+A+ +M R++ ++PN +TL+ +L +C +
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS-LKPNSITLMTILPSCAALSAL 533
Query: 358 EKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLG 417
KG + A +++ + +VD+ ++ G + +++ +P + W ++
Sbjct: 534 AKGKEIHAYA-IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIM 591
Query: 418 GCQIHSN 424
+H N
Sbjct: 592 AYGMHGN 598
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 161/334 (48%), Gaps = 41/334 (12%)
Query: 91 EAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQ-SNVFVGSAI 149
EA+ + M++L I+P + F +++ + L+D+ LGKQ+HA K G +V V + +
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 150 LDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWN 209
++LY K CG F K+F + RN VSWN
Sbjct: 140 VNLYRK--------------------------CG-----DFGAVYKVFDRISERNQVSWN 168
Query: 210 AMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIA---ALGMGKSFHACA 266
++I + E A+ F ML E + P+ TL + A +N+ L MGK HA
Sbjct: 169 SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYG 228
Query: 267 VKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAI 326
++ G+L+ F+ N+L++ Y K G + S ++ R++VTWN V+ QN + EA+
Sbjct: 229 LR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEAL 287
Query: 327 EFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHY--ACMV 384
E+ M + G+ P+ T+ +L AC+H ++ G + A L++ G L + + +V
Sbjct: 288 EYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA-LKN-GSLDENSFVGSALV 345
Query: 385 DLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGG 418
D+ + + ++D FD IG W A++ G
Sbjct: 346 DMYCNCKQVLSGRR-VFDGMFDRKIGLWNAMIAG 378
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 43/311 (13%)
Query: 51 CGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFT 110
CG F +V++VFD + + N VS ++I +E A+ F ML N+ PS FT
Sbjct: 146 CGD----FGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 201
Query: 111 FGSVIPSSTAL---EDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFE 167
SV+ + + L E L +GKQ+HA+ + G + N F+ + ++ +Y KL + + +
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLG 260
Query: 168 DTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNL 227
++V++ T++ L + E+ +AL+ +
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLR----------------------------- 291
Query: 228 FIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLD--VFVGNSLISFY 285
EM+ EG+ P+ T+ + A +++ L GK HA A+K G LD FVG++L+ Y
Sbjct: 292 --EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN-GSLDENSFVGSALVDMY 348
Query: 286 AKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRIN-GIRPNGVTL 344
C + VFD + +R I WNA+I GY+QN +EA+ F M + G+ N T+
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 345 LGLLWACNHTG 355
G++ AC +G
Sbjct: 409 AGVVPACVRSG 419
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 58/243 (23%)
Query: 57 KFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLL-----------NIR 105
K ++F ++ D ++V+ T+I + H+E+A+ L +M L +++
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 106 PSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRV 165
P+ T +++PS AL L GK++HA+A K L ++V VGSA++D+Y K
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAK---------- 564
Query: 166 FEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAV 225
CG L+ R K+F ++P +NV++WN +I Y G +EA+
Sbjct: 565 ----------------CGCLQMSR-----KVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 603
Query: 226 NLFIEMLREGLVPNHSTLPCAIIAAANIAALGMG----------------KSFHACAVKF 269
+L M+ +G+ PN T A ++ + G +AC V
Sbjct: 604 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 663
Query: 270 LGK 272
LG+
Sbjct: 664 LGR 666
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/494 (33%), Positives = 263/494 (53%), Gaps = 44/494 (8%)
Query: 37 QKLETPAIRT---DSVSCG--------SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAK 85
++L + AIR+ D V C S +VFD + D +V+S T +I + K
Sbjct: 289 KQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348
Query: 86 QHHY-EEAIYLFSRMLLL-NIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNV 143
+ EAI LFS M+ ++ P+ FTF S + L D +GKQ+ A K GL SN
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 144 FVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHR 203
V ++++ +++K +R EDA + F+ + +
Sbjct: 409 SVANSVISMFVK-------------------------------SDRMEDAQRAFESLSEK 437
Query: 204 NVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFH 263
N+VS+N + G + E+A L E+ L + T + AN+ ++ G+ H
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 264 ACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGE 323
+ VK + V N+LIS Y+KCGS++ + VF+ + RN+++W ++I G+A++G
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 324 EAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACM 383
+E F +M G++PN VT + +L AC+H GLV +G+ +F+ + K EHYACM
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 384 VDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDV 443
VDLL R+G +A EF+ +PF + W+ LG C++HSN ELG+ AAR+IL LDP +
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 444 SSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMND 503
++Y+ LSN + AGKW+ + +RR+MKE+ + + GCSWIE+ K+H F GD H
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 737
Query: 504 EIYAVLRSCTEQIR 517
+IY L +I+
Sbjct: 738 QIYDELDRLITEIK 751
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 165/374 (44%), Gaps = 41/374 (10%)
Query: 54 ESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGS 113
+S K V + +VVS + ++ + +AI +F L L + P+++ + +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 114 VIPSSTALEDLNLGKQLHAWATKVG-LQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNP 172
VI + + + + +G+ + K G +S+V VG +++D+++K
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK----------------- 214
Query: 173 NVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEML 232
FE+A K+F +M NVV+W MI Q G EA+ F++M+
Sbjct: 215 -------------GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
Query: 233 REGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKC---G 289
G + TL A A + L +GK H+ A++ G +D V SL+ YAKC G
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIR-SGLVDD-VECSLVDMYAKCSADG 319
Query: 290 SMEDSLLVFDKLTERNIVTWNAVICGYAQN-GRGEEAIEFFERMRING-IRPNGVTLLGL 347
S++D VFD++ + ++++W A+I GY +N EAI F M G + PN T
Sbjct: 320 SVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 348 LWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYA-CMVDLLSRSGRFKEAKEFLYDLPFD 406
AC + G QA G+ A ++ + +S R ++A+ L
Sbjct: 380 FKACGNLSDPRVGKQVLGQAF--KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 407 PGIGFWKALLGGCQ 420
+ + L G C+
Sbjct: 438 NLVSYNTFLDGTCR 451
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 155/335 (46%), Gaps = 52/335 (15%)
Query: 104 IRPSE-FTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEA 162
IRP + TF S++ S D LGK +HA + ++ + + ++++ LY K +A
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 163 TRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNE 222
VFE TM + R+VVSW+AM+ Y GR
Sbjct: 117 EDVFE-----------TM-----------------RRFGKRDVVSWSAMMACYGNNGREL 148
Query: 223 EAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKL-----DVFV 277
+A+ +F+E L GLVPN I A +N +G+G+ + FL K DV V
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGR----VTLGFLMKTGHFESDVCV 204
Query: 278 GNSLISFYAKC-GSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRING 336
G SLI + K S E++ VFDK++E N+VTW +I Q G EAI FF M ++G
Sbjct: 205 GCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG 264
Query: 337 IRPNGVTLLGLLWAC---NHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSR---S 390
+ TL + AC + L ++ +S+ ++ L D + +VD+ ++
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD------DVECSLVDMYAKCSAD 318
Query: 391 GRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNV 425
G + ++ ++D D + W AL+ G + N+
Sbjct: 319 GSVDDCRK-VFDRMEDHSVMSWTALITGYMKNCNL 352
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 224 AVNLFIEMLREGLVPNHS-TLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLI 282
AV+ M R+G+ P S T + + +GK HA ++F + D + NSLI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 283 SFYAKCGS---MEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRP 339
S Y+K G ED + +R++V+W+A++ Y NGR +AI+ F G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 340 NGVTLLGLLWACNHTGLVEKG 360
N ++ AC+++ V G
Sbjct: 165 NDYCYTAVIRACSNSDFVGVG 185
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 292 bits (747), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 152/461 (32%), Positives = 261/461 (56%), Gaps = 34/461 (7%)
Query: 59 SSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSS 118
S +F + ++VV T +I + Y +++ +F ++ + I P+E T S++P
Sbjct: 392 SMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI 451
Query: 119 TALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYT 178
L L LG++LH + K G + +G A++D+Y K
Sbjct: 452 GILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAK----------------------- 488
Query: 179 TMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVP 238
CG R A ++F+ + R++VSWN+MI +Q+ A+++F +M G+
Sbjct: 489 ---CG-----RMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540
Query: 239 NHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVF 298
+ ++ A+ A AN+ + GK+ H +K DV+ ++LI YAKCG+++ ++ VF
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 299 DKLTERNIVTWNAVICGYAQNGRGEEAIEFFERM-RINGIRPNGVTLLGLLWACNHTGLV 357
+ E+NIV+WN++I +G+ ++++ F M +GIRP+ +T L ++ +C H G V
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 358 EKGYSYFSQAKLEDPGML-KPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALL 416
++G +F ++ ED G+ + EHYAC+VDL R+GR EA E + +PF P G W LL
Sbjct: 661 DEGVRFF-RSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLL 719
Query: 417 GGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTR 476
G C++H NVEL E A+ +++ LDP + YV++SNA + A +W++V+ +R MKE+ + +
Sbjct: 720 GACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQK 779
Query: 477 VPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIR 517
+PG SWIEI + H+FV+GD NH + IY++L S ++R
Sbjct: 780 IPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 31/295 (10%)
Query: 54 ESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGS 113
E K ++FD V + V ++ +AK + I FS M + I P+ TF
Sbjct: 185 EYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDC 244
Query: 114 VIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPN 173
V+ + ++LG QLH G+ + +++L +Y K
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSK------------------ 286
Query: 174 VVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLR 233
CG RF+DA KLF+ M + V+WN MI GY Q+G EE++ F EM+
Sbjct: 287 --------CG-----RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 234 EGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMED 293
G++P+ T + + + L K H ++ LD+F+ ++LI Y KC +
Sbjct: 334 SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 294 SLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLL 348
+ +F + ++V + A+I GY NG +++E F + I PN +TL+ +L
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 134/298 (44%), Gaps = 33/298 (11%)
Query: 51 CGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFT 110
CGS SD +++ ++ ++ +II F + +A+ + +ML + P T
Sbjct: 83 CGSFSDCGKMFYRL--DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVST 140
Query: 111 FGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTH 170
F ++ + AL++ L + +G+ N FV S+++ Y++ I+ +
Sbjct: 141 FPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPS------- 193
Query: 171 NPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIE 230
KLF + ++ V WN M+ GY++ G + + F
Sbjct: 194 ------------------------KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSV 229
Query: 231 MLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGS 290
M + + PN T C + A+ + +G H V + + NSL+S Y+KCG
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 291 MEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLL 348
+D+ +F ++ + VTWN +I GY Q+G EE++ FF M +G+ P+ +T LL
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 134/301 (44%), Gaps = 43/301 (14%)
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICG 183
L GKQ+HA+ + + + IL +Y +CG
Sbjct: 51 LRQGKQVHAFLIVNSISGDSYTDERILGMY--------------------------AMCG 84
Query: 184 LLKRERFEDALKLFQEMPHR--NVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHS 241
F D K+F + R ++ WN++I + + G +A+ + +ML G+ P+ S
Sbjct: 85 -----SFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS 139
Query: 242 TLPCAIIAAANIAALGMGKSFHACAVKFLG-KLDVFVGNSLISFYAKCGSMEDSLLVFDK 300
T PC + A + G F + V LG + FV +SLI Y + G ++ +FD+
Sbjct: 140 TFPCLVKACVALKNFK-GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDR 198
Query: 301 LTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG 360
+ +++ V WN ++ GYA+ G + I+ F MR++ I PN VT +L C L++ G
Sbjct: 199 VLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLG 258
Query: 361 ---YSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLG 417
+ + ++ G +K ++ + S+ GRF +A + L+ + W ++
Sbjct: 259 VQLHGLVVVSGVDFEGSIKNS----LLSMYSKCGRFDDASK-LFRMMSRADTVTWNCMIS 313
Query: 418 G 418
G
Sbjct: 314 G 314
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 249 AAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTER--NI 306
A +N L GK HA + D + ++ YA CGS D +F +L R +I
Sbjct: 44 ACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSI 103
Query: 307 VTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWAC 351
WN++I + +NG +A+ F+ +M G+ P+ T L+ AC
Sbjct: 104 RPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 245/439 (55%), Gaps = 33/439 (7%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALE 122
+VF +P+ +VVS +I ++ Q++ EEA+ LF ML + PSE TF +++ + E
Sbjct: 585 KVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE 643
Query: 123 DLNLGKQLHAWATKVGLQS-NVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMI 181
L LG Q H TK G S ++G ++L +Y+ + EA +F + +P
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP--------- 694
Query: 182 CGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHS 241
+++V W M+ G+SQ G EEA+ + EM +G++P+ +
Sbjct: 695 ---------------------KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 242 TLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKL 301
T + + +++L G++ H+ LD N+LI YAKCG M+ S VFD++
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 302 TER-NIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG 360
R N+V+WN++I GYA+NG E+A++ F+ MR + I P+ +T LG+L AC+H G V G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Query: 361 YSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQ 420
F + + +H ACMVDLL R G +EA +F+ P W +LLG C+
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Query: 421 IHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGC 480
IH + GE +A +++ L+P++ S+YV+LSN + G W+ + +R+ M+++G+ +VPG
Sbjct: 914 IHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGY 973
Query: 481 SWIEIKSKVHVFVTGDRNH 499
SWI+++ + H+F GD++H
Sbjct: 974 SWIDVEQRTHIFAAGDKSH 992
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 173/350 (49%), Gaps = 36/350 (10%)
Query: 57 KFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIP 116
K +F E+ +VV+ +I K+ AI F M +++ + T GSV+
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 117 SSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVS 176
+ + +L+LG +HA A K+GL SN++VGS+++ +Y K
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC-------------------- 375
Query: 177 YTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGL 236
E+ E A K+F+ + +N V WNAMI GY+ G + + + LF++M G
Sbjct: 376 -----------EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGY 424
Query: 237 VPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLL 296
+ T + A L MG FH+ +K ++FVGN+L+ YAKCG++ED+
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQ 484
Query: 297 VFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHT-G 355
+F+++ +R+ VTWN +I Y Q+ EA + F+RM + GI +G L L AC H G
Sbjct: 485 IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 356 LVEKGYSYFSQAKLEDPGMLKPEHY-ACMVDLLSRSGRFKEAKEFLYDLP 404
L + + K G+ + H + ++D+ S+ G K+A++ LP
Sbjct: 545 LYQGKQVHCLSVKC---GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 170/353 (48%), Gaps = 43/353 (12%)
Query: 103 NIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEA 162
I P++FTF V+ + ++ G+Q+H K+GL+ N + G A++D+Y K I +A
Sbjct: 155 QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA 214
Query: 163 TRVFEDTHNPNVVSYTTMICGLLK--------------RE-------------------- 188
RVFE +PN V +T + G +K R+
Sbjct: 215 RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRL 274
Query: 189 -RFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAI 247
+ +DA LF EM +VV+WN MI G+ + G A+ F M + + STL +
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL 334
Query: 248 IAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIV 307
A +A L +G HA A+K +++VG+SL+S Y+KC ME + VF+ L E+N V
Sbjct: 335 SAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV 394
Query: 308 TWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFS-- 365
WNA+I GYA NG + +E F M+ +G + T LL C + +E G + S
Sbjct: 395 FWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSII 454
Query: 366 -QAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLG 417
+ KL + +VD+ ++ G ++A++ +++ D W ++G
Sbjct: 455 IKKKLAKNLFVGN----ALVDMYAKCGALEDARQ-IFERMCDRDNVTWNTIIG 502
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 230/514 (44%), Gaps = 86/514 (16%)
Query: 49 VSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSE 108
VS S+ +K + +VF+ + + N V +I +A + + LF M +
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 109 FTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFED 168
FTF S++ + A DL +G Q H+ K L N+FVG+A++D+Y K
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK------------- 475
Query: 169 THNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLF 228
CG L EDA ++F+ M R+ V+WN +IG Y Q EA +LF
Sbjct: 476 -------------CGAL-----EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 229 IEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKC 288
M G+V + + L + A ++ L GK H +VK D+ G+SLI Y+KC
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 289 GSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLL 348
G ++D+ VF L E ++V+ NA+I GY+QN EEA+ F+ M G+ P+ +T ++
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIV 636
Query: 349 WACN-----------HTGLVEKGYS-------------YFSQAKLEDPGMLKPE------ 378
AC+ H + ++G+S Y + + + L E
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 379 --HYACMVDLLSRSGRFKEAKEFLYDLPFD---PGIGFWKALLGGCQIHSNVELGEFAAR 433
+ M+ S++G ++EA +F ++ D P + +L C + S++ G
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 434 RI--LALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEI------ 485
I LA D ++++S ++ + + G S + EM+ + SW +
Sbjct: 757 LIFHLAHDLDELTSNTLI-DMYAKCGDMKGSSQVFDEMRRRSNV----VSWNSLINGYAK 811
Query: 486 ----KSKVHVFVTGDRNHHMNDEI--YAVLRSCT 513
+ + +F + ++H M DEI VL +C+
Sbjct: 812 NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 115/264 (43%), Gaps = 45/264 (17%)
Query: 115 IPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNV 174
+P AL L +GK +H+ + +G+ S +G+AI+DLY K + + A + F+
Sbjct: 68 MPQRLALA-LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD------- 119
Query: 175 VSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLRE 234
F E ++V +WN+M+ YS G+ + + F+ +
Sbjct: 120 ----------------------FLE---KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFEN 154
Query: 235 GLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDS 294
+ PN T + A + G+ H +K + + + G +L+ YAKC + D+
Sbjct: 155 QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA 214
Query: 295 LLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHT 354
VF+ + + N V W + GY + G EEA+ FERMR G RP +H
Sbjct: 215 RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRP------------DHL 262
Query: 355 GLVEKGYSYFSQAKLEDPGMLKPE 378
V +Y KL+D +L E
Sbjct: 263 AFVTVINTYIRLGKLKDARLLFGE 286
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 255 ALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVIC 314
AL +GK+ H+ ++ + +GN+++ YAKC + + FD L E+++ WN+++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 315 GYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYS-YFSQAKLEDPG 373
Y+ G+ + + F + N I PN T +L C VE G + S K+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG--- 190
Query: 374 MLKPEHY--ACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGG 418
L+ Y +VD+ ++ R +A+ +++ DP W L G
Sbjct: 191 -LERNSYCGGALVDMYAKCDRISDARR-VFEWIVDPNTVCWTCLFSG 235
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/475 (31%), Positives = 255/475 (53%), Gaps = 31/475 (6%)
Query: 43 AIRTDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLL 102
A T +S S S + + H++FDE+PD +VV+ T + + + EAI LF +M+ +
Sbjct: 147 AAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM 206
Query: 103 NIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEA 162
++P + V+ + + DL+ G+ + + ++ +Q N FV + +++LY K +E+A
Sbjct: 207 GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKA 266
Query: 163 TRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNE 222
VF+ M +++V+W+ MI GY+ +
Sbjct: 267 RSVFD-------------------------------SMVEKDIVTWSTMIQGYASNSFPK 295
Query: 223 EAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLI 282
E + LF++ML+E L P+ ++ + + A++ AL +G+ + + ++F+ N+LI
Sbjct: 296 EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALI 355
Query: 283 SFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGV 342
YAKCG+M VF ++ E++IV NA I G A+NG + + F + GI P+G
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
Query: 343 TLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYD 402
T LGLL C H GL++ G +F+ EHY CMVDL R+G +A + D
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475
Query: 403 LPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNV 462
+P P W ALL GC++ + +L E + ++AL+P + +YV LSN SV G+WD
Sbjct: 476 MPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEA 535
Query: 463 SNIRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIR 517
+ +R M +KGM ++PG SWIE++ KVH F+ D++H ++D+IYA L ++R
Sbjct: 536 AEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 143/293 (48%), Gaps = 39/293 (13%)
Query: 72 NVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLH 131
N+ ++I F H + E + LF + + FTF V+ + T LG LH
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 132 AWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFE 191
+ K G +V +++L +Y R
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSG-------------------------------SGRLN 163
Query: 192 DALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAA 251
DA KLF E+P R+VV+W A+ GY+ +GR+ EA++LF +M+ G+ P+ + + A
Sbjct: 164 DAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACV 223
Query: 252 NIAALGMGKSFHACAVKFLGKLDV----FVGNSLISFYAKCGSMEDSLLVFDKLTERNIV 307
++ L G+ VK++ ++++ FV +L++ YAKCG ME + VFD + E++IV
Sbjct: 224 HVGDLDSGEWI----VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIV 279
Query: 308 TWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKG 360
TW+ +I GYA N +E IE F +M ++P+ +++G L +C G ++ G
Sbjct: 280 TWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG 332
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 145/295 (49%), Gaps = 18/295 (6%)
Query: 178 TTMICGLLKRERFEDALK----LFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLR 233
T ++ LLKR F K LF N+ +N++I G+ E ++LF+ + +
Sbjct: 45 TFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRK 104
Query: 234 EGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMED 293
GL + T P + A ++ +G H+ VK DV SL+S Y+ G + D
Sbjct: 105 HGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLND 164
Query: 294 SLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNH 353
+ +FD++ +R++VTW A+ GY +GR EAI+ F++M G++P+ ++ +L AC H
Sbjct: 165 AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVH 224
Query: 354 TGLVEKG---YSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIG 410
G ++ G Y + +++ ++ +V+L ++ G+ ++A+ ++D + I
Sbjct: 225 VGDLDSGEWIVKYMEEMEMQKNSFVR----TTLVNLYAKCGKMEKARS-VFDSMVEKDIV 279
Query: 411 FWKALLGGCQIHSNVELGEFAARRILA--LDPEDVSSYVMLSNALSVA----GKW 459
W ++ G +S + G ++L L P+ S LS+ S+ G+W
Sbjct: 280 TWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW 334
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/454 (36%), Positives = 248/454 (54%), Gaps = 14/454 (3%)
Query: 73 VVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTF-------GSVIPSSTALEDLN 125
VS T+ I + EA FS M L + P+ TF G S AL DL
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL- 94
Query: 126 LGKQLHAWATKVGLQSN-VFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGL 184
LH +A K+GL N V VG+AI+ +Y K ++A VF+ + N V++ TMI G
Sbjct: 95 ----LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGY 150
Query: 185 LKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLP 244
++ + ++A K+F +MP R+++SW AMI G+ + G EEA+ F EM G+ P++ +
Sbjct: 151 MRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAII 210
Query: 245 CAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTER 304
A+ A N+ AL G H + K +V V NSLI Y +CG +E + VF + +R
Sbjct: 211 AALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR 270
Query: 305 NIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYF 364
+V+WN+VI G+A NG E++ +F +M+ G +P+ VT G L AC+H GLVE+G YF
Sbjct: 271 TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 365 SQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIH-S 423
K + + EHY C+VDL SR+GR ++A + + +P P +LL C H +
Sbjct: 331 QIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Query: 424 NVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWI 483
N+ L E + + L+ + S+YV+LSN + GKW+ S +RR+MK G+ + PG S I
Sbjct: 391 NIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSI 450
Query: 484 EIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIR 517
EI +HVF+ GD H I VL + +R
Sbjct: 451 EIDDCMHVFMAGDNAHVETTYIREVLELISSDLR 484
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 119/265 (44%), Gaps = 40/265 (15%)
Query: 54 ESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGS 113
S + + ++FD++P+ +++S T +I F K+ + EEA+ F M + ++P +
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 114 VIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPN 173
+ + T L L+ G +H + ++NV V ++++DLY + +E A +VF +
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 174 VVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLR 233
VVS+ ++I G++ G E++ F +M
Sbjct: 272 VVSWNSVIV-------------------------------GFAANGNAHESLVYFRKMQE 300
Query: 234 EGLVPNHSTLPCAIIAAANIAALGMGKSFH---ACAVKFLGKLDVFVGNSLISFYAKCGS 290
+G P+ T A+ A +++ + G + C + +++ + L+ Y++ G
Sbjct: 301 KGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHY--GCLVDLYSRAGR 358
Query: 291 MEDSLLVFDKLTERNIVTWNAVICG 315
+ED+L KL + + N V+ G
Sbjct: 359 LEDAL----KLVQSMPMKPNEVVIG 379
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 299 DKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNH----- 353
++ T V+W + I +NGR EA + F M + G+ PN +T + LL C
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 354 TGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWK 413
L + + Y + L+ ++ ++ + S+ GRFK+A+ ++D D W
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVG---TAIIGMYSKRGRFKKAR-LVFDYMEDKNSVTWN 144
Query: 414 ALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKG 473
++ G V + AA+ + D+ S+ + N G + REM+ G
Sbjct: 145 TMIDGYMRSGQV---DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG 201
Query: 474 M 474
+
Sbjct: 202 V 202
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 290 bits (741), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 280/521 (53%), Gaps = 19/521 (3%)
Query: 2 IQLLCICRSSLSLNKLS---KLHSLAPNYLIETQKASVQKLETPAIRTDSVSCGSESDKF 58
+ ++C+ + L L K+++ N IE V L ++ +++
Sbjct: 237 VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK----- 291
Query: 59 SSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSS 118
++FDE N+ + + +Q EA+ +F+ M+ +RP + S I S
Sbjct: 292 ----RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 119 TALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYT 178
+ L ++ GK H + + G +S + +A++D+Y+K + A R+F+ N VV++
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWN 407
Query: 179 TMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEML-REGLV 237
+++ G ++ + A + F+ MP +N+VSWN +I G Q EEA+ +F M +EG+
Sbjct: 408 SIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVN 467
Query: 238 PNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLV 297
+ T+ A ++ AL + K + K +LDV +G +L+ +++CG E ++ +
Sbjct: 468 ADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSI 527
Query: 298 FDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLV 357
F+ LT R++ W A I A G E AIE F+ M G++P+GV +G L AC+H GLV
Sbjct: 528 FNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLV 587
Query: 358 EKGYS-YFSQAKLEDPGMLKPE--HYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKA 414
++G ++S KL + PE HY CMVDLL R+G +EA + + D+P +P W +
Sbjct: 588 QQGKEIFYSMLKLHG---VSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNS 644
Query: 415 LLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGM 474
LL C++ NVE+ +AA +I L PE SYV+LSN + AG+W++++ +R MKEKG+
Sbjct: 645 LLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGL 704
Query: 475 TRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQ 515
+ PG S I+I+ K H F +GD +H I A+L +++
Sbjct: 705 RKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 173/375 (46%), Gaps = 71/375 (18%)
Query: 53 SESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLL-LNIRPSEFTF 111
+E + S +VFDE+ + NVVS T++I +A++ ++A+ LF RM+ + P+ T
Sbjct: 180 AECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Query: 112 GSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHN 171
VI + LEDL G++++A+ G++ N + SA++D+Y+K ++I+ A R
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR------- 292
Query: 172 PNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEM 231
LF E N+ NAM Y + G EA+ +F M
Sbjct: 293 ------------------------LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
Query: 232 LREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSM 291
+ G+ P+ ++ AI + + + + GKS H ++ + + N+LI Y KC
Sbjct: 329 MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 292 EDSLLVFDKLTERNIVTWNAVICGYAQNGRG----------------------------- 322
+ + +FD+++ + +VTWN+++ GY +NG
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 323 --EEAIEFFERMRIN-GIRPNGVTLLGLLWACNHTGLVEKG---YSYFSQAKLEDPGMLK 376
EEAIE F M+ G+ +GVT++ + AC H G ++ Y Y + ++ L
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ----LD 504
Query: 377 PEHYACMVDLLSRSG 391
+VD+ SR G
Sbjct: 505 VRLGTTLVDMFSRCG 519
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 123/226 (54%), Gaps = 10/226 (4%)
Query: 182 CGLLKRERFEDALKLFQEM-PHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNH 240
C L RE A ++F+ + +N++I GY+ +G EA+ LF+ M+ G+ P+
Sbjct: 75 CELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDK 134
Query: 241 STLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDK 300
T P + A A A G G H VK D+FV NSL+ FYA+CG ++ + VFD+
Sbjct: 135 YTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE 194
Query: 301 LTERNIVTWNAVICGYAQNGRGEEAIEFFERM-RINGIRPNGVTLLGLLWACNHTGLVEK 359
++ERN+V+W ++ICGYA+ ++A++ F RM R + PN VT++ ++ AC +E
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 360 G---YSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYD 402
G Y++ + +E ++ + +VD+ + AK L+D
Sbjct: 255 GEKVYAFIRNSGIEVNDLM----VSALVDMYMKCNAIDVAKR-LFD 295
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 32/277 (11%)
Query: 78 TIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKV 137
++I +A EAI LF RM+ I P ++TF + + G Q+H K+
Sbjct: 104 SLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 138 GLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLF 197
G ++FV ++++ Y + ++ A +VF++ NVVS+T+MICG +R+ +D
Sbjct: 164 GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD----- 218
Query: 198 QEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLR-EGLVPNHSTLPCAIIAAANIAAL 256
AV+LF M+R E + PN T+ C I A A + L
Sbjct: 219 --------------------------AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDL 252
Query: 257 GMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGY 316
G+ +A +++ + ++L+ Y KC +++ + +FD+ N+ NA+ Y
Sbjct: 253 ETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNY 312
Query: 317 AQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNH 353
+ G EA+ F M +G+RP+ +++L + +C+
Sbjct: 313 VRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 288 bits (738), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 148/454 (32%), Positives = 260/454 (57%), Gaps = 4/454 (0%)
Query: 64 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALED 123
VFD +V S +I + + YEE+I L M + P+ T V+ + + ++D
Sbjct: 192 VFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKD 251
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICG 183
+L K++H + ++ + ++ + +A+++ Y ++ A R+F +V+S+T+++ G
Sbjct: 252 KDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKG 311
Query: 184 LLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTL 243
++R + A F +MP R+ +SW MI GY + G E++ +F EM G++P+ T+
Sbjct: 312 YVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 244 PCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTE 303
+ A A++ +L +G+ K K DV VGN+LI Y KCG E + VF + +
Sbjct: 372 VSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ 431
Query: 304 RNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSY 363
R+ TW A++ G A NG+G+EAI+ F +M+ I+P+ +T LG+L ACNH+G+V++ +
Sbjct: 432 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKF 491
Query: 364 FSQAKLEDPGMLKPE--HYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQI 421
F AK+ ++P HY CMVD+L R+G KEA E L +P +P W ALLG ++
Sbjct: 492 F--AKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRL 549
Query: 422 HSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCS 481
H++ + E AA++IL L+P++ + Y +L N + +W ++ +RR++ + + + PG S
Sbjct: 550 HNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFS 609
Query: 482 WIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQ 515
IE+ H FV GD++H ++EIY L ++
Sbjct: 610 LIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQE 643
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 146/293 (49%), Gaps = 26/293 (8%)
Query: 193 ALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIA-AA 251
A KLF ++P +VV WN MI G+S+ + E V L++ ML+EG+ P+ T P +
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 252 NIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNA 311
+ AL GK H VKF +++V N+L+ Y+ CG M+ + VFD+ + ++ +WN
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 312 VICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHT---GLVEKGYSYFSQAK 368
+I GY + EE+IE M N + P VTLL +L AC+ L ++ + Y S+ K
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 369 LEDPGM-----LKPEHYAC-MVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIH 422
E P + L + AC +D+ R R +A++ + W +++ G
Sbjct: 267 TE-PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVIS----------WTSIVKGYVER 315
Query: 423 SNVELGEFAARRILALDP-EDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGM 474
N++L AR P D S+ ++ + AG ++ I REM+ GM
Sbjct: 316 GNLKL----ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/507 (20%), Positives = 220/507 (43%), Gaps = 86/507 (16%)
Query: 2 IQLLCICRSSLSLNKLSKLHSLAPNYLIETQKASVQKLETPAIRTDSVSCGSESDKFSSV 61
I +L +C+++ ++ +LHS + + +KL C S
Sbjct: 38 ISILGVCKTT---DQFKQLHSQSITRGVAPNPTFQKKLFV-------FWCSRLGGHVSYA 87
Query: 62 HQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPS-STA 120
+++F ++P+ +VV +I ++K E + L+ ML + P TF ++
Sbjct: 88 YKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRD 147
Query: 121 LEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTM 180
L GK+LH K GL SN++V +A++ +Y ++ A VF+ +V S+ M
Sbjct: 148 GGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM 207
Query: 181 ICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNH 240
I G + + +E++++L EM RN+VS P
Sbjct: 208 ISGYNRMKEYEESIELLVEM-ERNLVS------------------------------PTS 236
Query: 241 STLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDK 300
TL + A + + + K H + + + + N+L++ YA CG M+ ++ +F
Sbjct: 237 VTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRS 296
Query: 301 LTERNIVTWNAVICGYAQNGRGE-------------------------------EAIEFF 329
+ R++++W +++ GY + G + E++E F
Sbjct: 297 MKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 330 ERMRINGIRPNGVTLLGLLWACNHTGLVEKG---YSYFSQAKLEDPGMLKPEHYACMVDL 386
M+ G+ P+ T++ +L AC H G +E G +Y + K+++ ++ ++D+
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVG----NALIDM 412
Query: 387 LSRSGRFKEAKEFLYDLPFDPGIGF-WKALLGGCQIHSNVE--LGEFAARRILALDPEDV 443
+ G ++A++ +D+ D F W A++ G + + + F + +++ P+D+
Sbjct: 413 YFKCGCSEKAQKVFHDM--DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDI 470
Query: 444 SSYVMLSNALSVAGKWDNVSNIRREMK 470
+Y+ + +A + +G D +M+
Sbjct: 471 -TYLGVLSACNHSGMVDQARKFFAKMR 496
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/548 (30%), Positives = 276/548 (50%), Gaps = 42/548 (7%)
Query: 5 LCICRSSLSLNKLSKLHSLAPNYLIETQKASVQKLETPAIRTDSVSCG-SESDKFSSVHQ 63
L + S +L L+++H L Y ++T KL + C S SD +
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKL--------ILHCAISISDALPYARR 60
Query: 64 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLN-IRPSEFTFGSVIPSSTALE 122
+ P+ + T++ +++ ++ +F M+ + P F+F VI +
Sbjct: 61 LLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFR 120
Query: 123 DLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVV------- 175
L G Q+H A K GL+S++FVG+ ++ +Y +E A +VF++ H PN+V
Sbjct: 121 SLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVIT 180
Query: 176 ------------------------SYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAM 211
S+ M+ G +K E A ++F EMPHR+ VSW+ M
Sbjct: 181 ACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTM 240
Query: 212 IGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLG 271
I G + G E+ F E+ R G+ PN +L + A + + GK H K
Sbjct: 241 IVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY 300
Query: 272 KLDVFVGNSLISFYAKCGSMEDSLLVFDKLTE-RNIVTWNAVICGYAQNGRGEEAIEFFE 330
V V N+LI Y++CG++ + LVF+ + E R IV+W ++I G A +G+GEEA+ F
Sbjct: 301 SWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFN 360
Query: 331 RMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRS 390
M G+ P+G++ + LL AC+H GL+E+G YFS+ K + EHY CMVDL RS
Sbjct: 361 EMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRS 420
Query: 391 GRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLS 450
G+ ++A +F+ +P P W+ LLG C H N+EL E +R+ LDP + V+LS
Sbjct: 421 GKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLS 480
Query: 451 NALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLR 510
NA + AGKW +V++IR+ M + + + S +E+ ++ F G++ ++ E + L+
Sbjct: 481 NAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLK 540
Query: 511 SCTEQIRE 518
++++
Sbjct: 541 EIILRLKD 548
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/461 (34%), Positives = 251/461 (54%), Gaps = 32/461 (6%)
Query: 60 SVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSST 119
SV DE+ D VS ++I + + +A+ L+ M+ + FT SV+ + T
Sbjct: 194 SVFYGMDELRD--EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 120 ALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTT 179
+L+ L G+Q H K G N VGS ++D Y K
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK------------------------ 287
Query: 180 MICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGR-NEEAVNLFIEMLREGLVP 238
CG + D+ K+FQE+ ++V WN MI GYS +EEAV F +M R G P
Sbjct: 288 --CGGC--DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP 343
Query: 239 NHSTLPCAIIAAANIAALGMGKSFHACAVK-FLGKLDVFVGNSLISFYAKCGSMEDSLLV 297
+ + C A +N+++ K H A+K + + V N+LIS Y K G+++D+ V
Sbjct: 344 DDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWV 403
Query: 298 FDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLV 357
FD++ E N V++N +I GYAQ+G G EA+ ++RM +GI PN +T + +L AC H G V
Sbjct: 404 FDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKV 463
Query: 358 EKGYSYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLG 417
++G YF+ K + EHY+CM+DLL R+G+ +EA+ F+ +P+ PG W ALLG
Sbjct: 464 DEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG 523
Query: 418 GCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRV 477
C+ H N+ L E AA ++ + P + YVML+N + A KW+ ++++R+ M+ K + +
Sbjct: 524 ACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKK 583
Query: 478 PGCSWIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIRE 518
PGCSWIE+K K HVFV D +H M E+ L +++++
Sbjct: 584 PGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKK 624
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 169/365 (46%), Gaps = 21/365 (5%)
Query: 102 LNIRPSEF-TFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIE 160
+N P +F TF ++ S A DL GK LHA K + S+ ++ + ++LY K +
Sbjct: 1 MNQTPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLS 60
Query: 161 EATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGR 220
A F T PNV SY ++ K + A +LF E+P + VS+N +I GY+
Sbjct: 61 YARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARE 120
Query: 221 NEEAVNLFIEMLREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVF--VG 278
A+ LF M + G + TL I A + + + K H +V G D + V
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVS--GGFDSYSSVN 176
Query: 279 NSLISFYAKCGSMEDSLLVFDKLTE-RNIVTWNAVICGYAQNGRGEEAIEFFERMRINGI 337
N+ +++Y+K G + +++ VF + E R+ V+WN++I Y Q+ G +A+ ++ M G
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGF 236
Query: 338 RPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEHYAC-MVDLLSRSGRFKEA 396
+ + TL +L A + G + KL G + H ++D S+ G
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQF--HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGM 294
Query: 397 --KEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALD-----PEDVSSYVML 449
E ++ P + W ++ G + N EL E A + + P+D S+V +
Sbjct: 295 YDSEKVFQEILSPDLVVWNTMISGYSM--NEELSEEAVKSFRQMQRIGHRPDDC-SFVCV 351
Query: 450 SNALS 454
++A S
Sbjct: 352 TSACS 356
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 38/268 (14%)
Query: 51 CGSESDKFSSVHQVFDEV--PDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSE 108
CG D +VF E+ PDL VV T I G + EEA+ F +M + RP +
Sbjct: 288 CGG-CDGMYDSEKVFQEILSPDL-VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDD 345
Query: 109 FTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSN-VFVGSAILDLYIKLSSIEEATRVFE 167
+F V + + L + KQ+H A K + SN + V +A++ LY K ++++A VF+
Sbjct: 346 CSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFD 405
Query: 168 DTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNL 227
N VS+ MI GY+Q G EA+ L
Sbjct: 406 RMPELNAVSFNCMI-------------------------------KGYAQHGHGTEALLL 434
Query: 228 FIEMLREGLVPNHSTLPCAIIAAANIAALGMGKS-FHACAVKFLGKLDVFVGNSLISFYA 286
+ ML G+ PN T + A A+ + G+ F+ F + + + +I
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 287 KCGSMEDSLLVFDKLTER-NIVTWNAVI 313
+ G +E++ D + + V W A++
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALL 522
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 39/208 (18%)
Query: 8 CRSSLSLNKLSKLHSLAPNYLIETQKASVQKLETPAIRTDSVSCGSESDKFSSVHQVFDE 67
C + S ++ ++H LA I + + SV +S +S VFD
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVN--------NALISLYYKSGNLQDARWVFDR 406
Query: 68 VPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLG 127
+P+LN VS +I +A+ H EA+ L+ RML I P++ TF +V+ + ++ G
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG 466
Query: 128 KQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKR 187
++ ++++E ++ P Y+ MI L +
Sbjct: 467 QEY-------------------------FNTMKETFKI-----EPEAEHYSCMIDLLGRA 496
Query: 188 ERFEDALKLFQEMPHR-NVVSWNAMIGG 214
+ E+A + MP++ V+W A++G
Sbjct: 497 GKLEEAERFIDAMPYKPGSVAWAALLGA 524
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 285 bits (730), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/499 (31%), Positives = 272/499 (54%), Gaps = 26/499 (5%)
Query: 46 TDSVSCGSESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIR 105
T VS S + S +F E+P+ NVVS T+I +A+ ++A+ LF M NI
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 106 PSEFTFGSVIPSSTALEDLNLGKQLH-----AWATKV-GL-----------------QSN 142
+++ E +NL +++ +W V GL + N
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN 232
Query: 143 VFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPH 202
+ +A++ Y + + I+EA ++F+ + S+ TMI G ++ A LF MP
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPE 292
Query: 203 RNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLV-PNHSTLPCAIIAAANIAALGMGKS 261
+NV+SW MI GY + NEEA+N+F +MLR+G V PN T + A +++A L G+
Sbjct: 293 KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQ 352
Query: 262 FHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDK--LTERNIVTWNAVICGYAQN 319
H K + + + V ++L++ Y+K G + + +FD + +R++++WN++I YA +
Sbjct: 353 IHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHH 412
Query: 320 GRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSYFSQAKLEDPGMLKPEH 379
G G+EAIE + +MR +G +P+ VT L LL+AC+H GLVEKG +F ++ L+ EH
Sbjct: 413 GHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEH 472
Query: 380 YACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVELGEFAARRILALD 439
Y C+VDL R+GR K+ F+ F+ A+L C +H+ V + + +++L
Sbjct: 473 YTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG 532
Query: 440 PEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWIEIKSKVHVFVTGDRNH 499
+D +YV++SN + GK + + +R +MKEKG+ + PGCSW+++ + H+FV GD++H
Sbjct: 533 SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSH 592
Query: 500 HMNDEIYAVLRSCTEQIRE 518
+ + ++L ++R+
Sbjct: 593 PQFEALDSILSDLRNKMRK 611
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 168/356 (47%), Gaps = 37/356 (10%)
Query: 32 QKASVQKLETPAIRTDSVSCGSESDK----FSSVHQVFDEVPDLNVVSATTIIGRFAKQH 87
Q ++ +L + R+ SV S++D+ F+ V ++ V +IG K
Sbjct: 2 QSRALSRLRSYYKRS-SVFPSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVG 60
Query: 88 HYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGS 147
EA LF + ++ T+ VI L D+ ++L +V + NV +
Sbjct: 61 KIAEARKLFDGLPERDV----VTWTHVITGYIKLGDMREARELF---DRVDSRKNVVTWT 113
Query: 148 AILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVS 207
A++ Y++ + A +F++ NVVS+ TMI G + R + AL+LF EMP RN+VS
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS 173
Query: 208 WNAMIGGYSQTGRNEEAVNLFIEMLR----------EGLVPNHST---------LPCAII 248
WN+M+ Q GR +EA+NLF M R +GL N +P I
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI 233
Query: 249 AAANIAALGMGKSFHACAV----KFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTER 304
+ N G ++ + + + D N++I+ + + M + +FD++ E+
Sbjct: 234 ISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK 293
Query: 305 NIVTWNAVICGYAQNGRGEEAIEFFERM-RINGIRPNGVTLLGLLWACNH-TGLVE 358
N+++W +I GY +N EEA+ F +M R ++PN T + +L AC+ GLVE
Sbjct: 294 NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 285 bits (729), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 258/473 (54%), Gaps = 12/473 (2%)
Query: 54 ESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGS 113
E F +VF +P +V S +I +AKQ EA+ L+ +M+ I P E+T S
Sbjct: 178 ELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLS 237
Query: 114 VIPSSTALEDLNLGKQLHAWATKVG--LQSNVFVGSAILDLYIKLSSIEEATRVFEDTHN 171
++ L D+ LGK +H W + G SN+ + +A+LD+Y K A R F+
Sbjct: 238 LLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK 297
Query: 172 PNVVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVN-LFIE 230
++ S+ TM+ G ++ E A +F +MP R++VSWN+++ GYS+ G ++ V LF E
Sbjct: 298 KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE 357
Query: 231 M-LREGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCG 289
M + E + P+ T+ I AAN L G+ H ++ K D F+ ++LI Y KCG
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCG 417
Query: 290 SMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLW 349
+E + +VF TE+++ W ++I G A +G G++A++ F RM+ G+ PN VTLL +L
Sbjct: 418 IIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLT 477
Query: 350 ACNHTGLVEKGYSYFSQAKLE---DPGMLKPEHYACMVDLLSRSGRFKEAKEFLY-DLPF 405
AC+H+GLVE+G F+ K + DP + EHY +VDLL R+GR +EAK+ + +P
Sbjct: 478 ACSHSGLVEEGLHVFNHMKDKFGFDP---ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPM 534
Query: 406 DPGIGFWKALLGGCQIHSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNI 465
P W ++L C+ ++E E A +L L+PE YV+LSN + G+W
Sbjct: 535 RPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKT 594
Query: 466 RREMKEKGMTRVPGCSWIEIKSKVHVFVTGDR-NHHMNDEIYAVLRSCTEQIR 517
R M+ +G+ + G S + +H FV ++ NH EI +L+ +++
Sbjct: 595 REAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/446 (19%), Positives = 193/446 (43%), Gaps = 83/446 (18%)
Query: 68 VPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNLG 127
P+ NV T+I + + E L+S M+ + P TF ++ +S+ L ++
Sbjct: 95 TPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV--- 149
Query: 128 KQLHAWATKVG-LQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLK 186
KQ+H G L ++ ++++ Y++L + A +VF +P+V S+ MI
Sbjct: 150 KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIV---- 205
Query: 187 RERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCA 246
GY++ G + EA+ L+ +M+ +G+ P+ T+
Sbjct: 206 ---------------------------GYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSL 238
Query: 247 IIAAANIAALGMGKSFHA-------------------------C--------AVKFLGKL 273
++ +++ + +GK H C A + K
Sbjct: 239 LVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKK 298
Query: 274 DVFVGNSLISFYAKCGSMEDSLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIE--FFER 331
D+ N+++ + + G ME + VFD++ +R++V+WN+++ GY++ G + + F+E
Sbjct: 299 DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEM 358
Query: 332 MRINGIRPNGVTLLGLLWACNHTGLVEKG---YSYFSQAKLEDPGMLKPEHYACMVDLLS 388
+ ++P+ VT++ L+ + G + G + + +L+ L + ++D+
Sbjct: 359 TIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS----SALIDMYC 414
Query: 389 RSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHSNVE--LGEFAARRILALDPEDVSSY 446
+ G + A ++ + + W +++ G H N + L F + + P +V+
Sbjct: 415 KCGIIERAF-MVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLL 473
Query: 447 VMLSNALSVAGKWDNVSNIRREMKEK 472
+L+ A S +G + ++ MK+K
Sbjct: 474 AVLT-ACSHSGLVEEGLHVFNHMKDK 498
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 271/497 (54%), Gaps = 4/497 (0%)
Query: 5 LCICRSSLSLNKLSKLHS-LAPNYLIETQKASVQKLETPAIRTDSVSCGSESDKFSSVHQ 63
L + +S S + L +H L +LI + + L A+ D + ++ +
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLL---ALCVDDSTFNKPTNLLGYAYG 72
Query: 64 VFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALED 123
+F ++ + N+ +I F+ +A +++ML I P TF +I +S+ +E
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 124 LNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICG 183
+ +G+Q H+ + G Q++V+V ++++ +Y I A R+F +VVS+T+M+ G
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 184 LLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTL 243
K E+A ++F EMPHRN+ +W+ MI GY++ E+A++LF M REG+V N + +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 244 PCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTE 303
I + A++ AL G+ + VK +++ +G +L+ + +CG +E ++ VF+ L E
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 304 RNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGYSY 363
+ ++W+++I G A +G +A+ +F +M G P VT +L AC+H GLVEKG
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 364 FSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQIHS 423
+ K + + EHY C+VD+L R+G+ EA+ F+ + P ALLG C+I+
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 424 NVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCSWI 483
N E+ E ++ + PE YV+LSN + AG+WD + ++R MKEK + + PG S I
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 492
Query: 484 EIKSKVHVFVTGDRNHH 500
EI K++ F GD H
Sbjct: 493 EIDGKINKFTMGDDQKH 509
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 242/459 (52%), Gaps = 39/459 (8%)
Query: 63 QVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALE 122
+VFD++ V+ T ++ + + +A+ LF ++ + F F V+ + +LE
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299
Query: 123 DLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMIC 182
+LNLGKQ+HA K+GL+S V VG+ ++D YIK SS
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSS------------------------ 335
Query: 183 GLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEML-REGLVPNHS 241
FE A + FQE+ N VSW+A+I GY Q + EEAV F + + + N
Sbjct: 336 -------FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF 388
Query: 242 TLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKL 301
T A + +A +G HA A+K + ++LI+ Y+KCG ++D+ VF+ +
Sbjct: 389 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESM 448
Query: 302 TERNIVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWACNHTGLVEKGY 361
+IV W A I G+A G EA+ FE+M G++PN VT + +L AC+H GLVE+G
Sbjct: 449 DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508
Query: 362 SYFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGGCQI 421
+ +HY CM+D+ +RSG EA +F+ ++PF+P WK L GC
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWT 568
Query: 422 HSNVELGEFAARRILALDPEDVSSYVMLSNALSVAGKWDNVSNIRREMKEKGMTRVPGCS 481
H N+ELGE A + LDPED + YV+ N + AGKW+ + + + M E+ + + CS
Sbjct: 569 HKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCS 628
Query: 482 WIEIKSKVHVFVTGDRNHHMNDEIYAVLRSCTEQIREFE 520
WI+ K K+H F+ GD++H EIY E+++EF+
Sbjct: 629 WIQEKGKIHRFIVGDKHHPQTQEIY-------EKLKEFD 660
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 188/408 (46%), Gaps = 39/408 (9%)
Query: 54 ESDKFSSVHQVFDEVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGS 113
E ++FDE+ +LN VS TT+I +A+Q ++A+ LFS ML +P + +
Sbjct: 130 ECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTT 189
Query: 114 VIPSSTALEDLNLGKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPN 173
++ S L+ G+Q+HA + GL SN + + I+++Y+K + A RVF+
Sbjct: 190 LLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD------ 243
Query: 174 VVSYTTMICGLLKRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLR 233
+M + V+ ++ GY+Q GR +A+ LF++++
Sbjct: 244 -------------------------QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVT 278
Query: 234 EGLVPNHSTLPCAIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMED 293
EG+ + + A A++ L +GK HAC K + +V VG L+ FY KC S E
Sbjct: 279 EGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFES 338
Query: 294 SLLVFDKLTERNIVTWNAVICGYAQNGRGEEAIEFFERMRI-NGIRPNGVTLLGLLWACN 352
+ F ++ E N V+W+A+I GY Q + EEA++ F+ +R N N T + AC+
Sbjct: 339 ACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS 398
Query: 353 HTGLVEKGYSYFSQA-KLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGF 411
G + A K G E + ++ + S+ G +A E + +P I
Sbjct: 399 VLADCNIGGQVHADAIKRSLIGSQYGE--SALITMYSKCGCLDDANEVFESMD-NPDIVA 455
Query: 412 WKALLGGCQIHSNVE--LGEFAARRILALDPEDVSSYVMLSNALSVAG 457
W A + G + N L F + P V +++ + A S AG
Sbjct: 456 WTAFISGHAYYGNASEALRLFEKMVSCGMKPNSV-TFIAVLTACSHAG 502
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 49/314 (15%)
Query: 8 CRSSLSLNKLSKLHSLAPNYLIETQKASVQKLETPAIRTDSVSCGSESDKFSSVHQVFDE 67
C S LN ++H+ +E++ + + TP + + C S F S + F E
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVS----VGTPLVDF-YIKCSS----FESACRAFQE 345
Query: 68 VPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRP-SEFTFGSVIPSSTALEDLNL 126
+ + N VS + II + + +EEA+ F + N + FT+ S+ + + L D N+
Sbjct: 346 IREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNI 405
Query: 127 GKQLHAWATKVGLQSNVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLLK 186
G Q+HA A K L + + SA++ +Y K +++A VFE NP++V++T I
Sbjct: 406 GGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFI----- 460
Query: 187 RERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPCA 246
G++ G EA+ LF +M+ G+ PN T
Sbjct: 461 --------------------------SGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAV 494
Query: 247 IIAAANIAALGMGKSFHACAVKFLGKLDVFVG----NSLISFYAKCGSMEDSLLVFDKLT 302
+ A ++ + GK C L K +V + +I YA+ G ++++L +
Sbjct: 495 LTACSHAGLVEQGKH---CLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP 551
Query: 303 -ERNIVTWNAVICG 315
E + ++W + G
Sbjct: 552 FEPDAMSWKCFLSG 565
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 150/360 (41%), Gaps = 49/360 (13%)
Query: 67 EVPDLNVVSATTIIGRFAKQHHYEEAIYLFSRMLLLNIRPSEFTFGSVIPSSTALEDLNL 126
+V +L++VS +K EA M + S +++ + + L L+
Sbjct: 49 QVENLHLVS-------LSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101
Query: 127 GKQLHAWATKVGLQS-NVFVGSAILDLYIKLSSIEEATRVFEDTHNPNVVSYTTMICGLL 185
G+ LH ++G+++ +V + + +L +Y + S+E
Sbjct: 102 GRLLHD-RMRMGIENPSVLLQNCVLQMYCECRSLE------------------------- 135
Query: 186 KRERFEDALKLFQEMPHRNVVSWNAMIGGYSQTGRNEEAVNLFIEMLREGLVPNHSTLPC 245
DA KLF EM N VS MI Y++ G ++AV LF ML G P S
Sbjct: 136 ------DADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTT 189
Query: 246 AIIAAANIAALGMGKSFHACAVKFLGKLDVFVGNSLISFYAKCGSMEDSLLVFDKLTERN 305
+ + N AL G+ HA ++ + + +++ Y KCG + + VFD++ +
Sbjct: 190 LLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKK 249
Query: 306 IVTWNAVICGYAQNGRGEEAIEFFERMRINGIRPNGVTLLGLLWAC---NHTGLVEKGYS 362
V ++ GY Q GR +A++ F + G+ + +L AC L ++ ++
Sbjct: 250 PVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHA 309
Query: 363 YFSQAKLEDPGMLKPEHYACMVDLLSRSGRFKEAKEFLYDLPFDPGIGFWKALLGG-CQI 421
++ LE + +VD + F+ A ++ +P W A++ G CQ+
Sbjct: 310 CVAKLGLESEVSVGTP----LVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYCQM 364
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 188,078,442
Number of Sequences: 539616
Number of extensions: 7802342
Number of successful extensions: 24376
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 17041
Number of HSP's gapped (non-prelim): 2249
length of query: 521
length of database: 191,569,459
effective HSP length: 122
effective length of query: 399
effective length of database: 125,736,307
effective search space: 50168786493
effective search space used: 50168786493
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)