Query 009971
Match_columns 521
No_of_seqs 302 out of 2270
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 17:01:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009971.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009971hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 1.3E-62 4.3E-67 524.2 46.7 448 73-521 4-451 (451)
2 3brk_X Glucose-1-phosphate ade 100.0 7.8E-51 2.7E-55 429.4 37.3 384 86-512 9-413 (420)
3 3st8_A Bifunctional protein GL 100.0 4.7E-45 1.6E-49 393.6 37.1 391 87-521 10-444 (501)
4 1hm9_A GLMU, UDP-N-acetylgluco 100.0 1.5E-43 5.2E-48 378.5 34.9 384 90-521 12-435 (468)
5 2ggo_A 401AA long hypothetical 100.0 2.6E-44 9E-49 376.9 28.3 356 90-521 1-389 (401)
6 4fce_A Bifunctional protein GL 100.0 9.4E-43 3.2E-47 371.2 30.3 383 88-521 7-430 (459)
7 2v0h_A Bifunctional protein GL 100.0 2.4E-41 8.2E-46 360.0 32.9 383 87-521 3-427 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 1E-34 3.4E-39 289.9 21.1 246 88-366 1-271 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 1.2E-32 4.1E-37 273.2 25.2 237 87-367 22-261 (269)
10 2e3d_A UTP--glucose-1-phosphat 100.0 1.3E-31 4.5E-36 270.1 23.6 245 86-365 5-281 (302)
11 1tzf_A Glucose-1-phosphate cyt 100.0 9E-32 3.1E-36 264.8 20.9 247 88-369 1-254 (259)
12 2ux8_A Glucose-1-phosphate uri 100.0 1.3E-31 4.6E-36 269.4 19.9 246 88-366 13-280 (297)
13 2pa4_A UTP-glucose-1-phosphate 100.0 6.6E-31 2.3E-35 267.6 22.7 250 88-367 11-284 (323)
14 3pnn_A Conserved domain protei 100.0 6.2E-31 2.1E-35 265.4 21.7 258 87-365 3-291 (303)
15 4evw_A Nucleoside-diphosphate- 100.0 1.2E-30 4E-35 256.9 19.3 226 92-362 2-244 (255)
16 1fxo_A Glucose-1-phosphate thy 100.0 1.1E-29 3.7E-34 255.0 25.0 234 88-364 1-240 (293)
17 1lvw_A Glucose-1-phosphate thy 100.0 2.6E-29 8.8E-34 252.4 24.6 233 89-364 3-241 (295)
18 1mc3_A Glucose-1-phosphate thy 100.0 1.9E-29 6.4E-34 253.6 20.3 232 90-364 4-241 (296)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 1.9E-29 6.6E-34 255.1 19.8 243 87-363 2-282 (308)
20 2x65_A Mannose-1-phosphate gua 100.0 5.7E-28 1.9E-32 246.9 18.4 235 90-359 2-270 (336)
21 2cu2_A Putative mannose-1-phos 99.9 1.8E-27 6.1E-32 243.3 14.9 234 89-361 2-267 (337)
22 1jyk_A LICC protein, CTP:phosp 99.9 7.4E-27 2.5E-31 229.7 14.7 221 88-365 24-252 (254)
23 3oam_A 3-deoxy-manno-octuloson 99.9 5.8E-26 2E-30 223.0 20.6 240 88-366 1-250 (252)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 4.2E-24 1.4E-28 209.9 22.2 237 88-362 8-255 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 6.6E-24 2.3E-28 209.4 20.9 239 86-363 15-263 (264)
26 2y6p_A 3-deoxy-manno-octuloson 99.9 1.9E-22 6.5E-27 195.0 20.9 225 89-363 2-231 (234)
27 4fcu_A 3-deoxy-manno-octuloson 99.9 4.2E-22 1.4E-26 195.3 22.6 238 90-366 2-251 (253)
28 1h7e_A 3-deoxy-manno-octuloson 99.9 3.4E-22 1.2E-26 194.7 20.4 229 88-364 1-238 (245)
29 1vic_A 3-deoxy-manno-octuloson 99.9 1.8E-21 6E-26 191.9 22.9 246 89-367 2-255 (262)
30 2xme_A CTP-inositol-1-phosphat 99.9 1.3E-22 4.5E-27 196.2 12.2 214 87-362 16-231 (232)
31 3f1c_A Putative 2-C-methyl-D-e 99.9 3E-21 1E-25 188.6 17.9 231 87-370 1-239 (246)
32 2vsh_A TARI, 2-C-methyl-D-eryt 99.9 1.3E-20 4.5E-25 182.0 18.5 221 90-364 3-234 (236)
33 2yc3_A 2-C-methyl-D-erythritol 99.8 3.9E-20 1.3E-24 178.1 15.2 221 87-364 2-225 (228)
34 1vgw_A 4-diphosphocytidyl-2C-m 99.8 3.3E-19 1.1E-23 171.8 21.5 217 88-363 5-228 (231)
35 2xwl_A 2-C-methyl-D-erythritol 99.8 1.1E-19 3.9E-24 174.0 18.1 216 88-365 1-220 (223)
36 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.8 7.4E-21 2.5E-25 197.1 10.4 262 207-521 12-319 (374)
37 1ezi_A CMP-N-acetylneuraminic 99.8 4.2E-19 1.4E-23 171.0 19.3 217 88-364 3-224 (228)
38 2dpw_A Hypothetical protein TT 99.8 3.5E-20 1.2E-24 179.4 6.8 201 89-357 2-231 (232)
39 2icy_A Probable UTP-glucose-1- 99.8 1.2E-17 4.2E-22 176.1 25.9 340 88-478 78-469 (469)
40 1i52_A 4-diphosphocytidyl-2-C- 99.8 4.6E-18 1.6E-22 164.6 18.2 222 87-366 5-230 (236)
41 1qwj_A Cytidine monophospho-N- 99.7 1.6E-17 5.4E-22 160.3 15.2 216 88-365 2-222 (229)
42 2wee_A MOBA-related protein; u 99.7 2.1E-17 7.3E-22 154.9 14.3 188 88-363 4-195 (197)
43 1vpa_A 2-C-methyl-D-erythritol 99.7 1.6E-16 5.4E-21 153.3 19.8 213 89-365 13-229 (234)
44 3q80_A 2-C-methyl-D-erythritol 99.7 3E-16 1E-20 151.6 21.2 217 89-363 7-229 (231)
45 2i5k_A UTP--glucose-1-phosphat 99.7 5.6E-16 1.9E-20 164.3 24.2 337 87-478 90-485 (488)
46 2waw_A MOBA relate protein; un 99.7 1.9E-16 6.5E-21 148.5 17.9 188 88-363 4-195 (199)
47 3rsb_A Adenosylcobinamide-phos 99.7 2.2E-17 7.7E-22 155.0 11.4 129 90-242 1-136 (196)
48 2px7_A 2-C-methyl-D-erythritol 99.7 7.9E-17 2.7E-21 156.2 15.1 208 88-365 24-233 (236)
49 3d5n_A Q97W15_sulso; NESG, SSR 99.6 3.5E-16 1.2E-20 147.4 10.7 184 89-364 2-189 (197)
50 2e8b_A Probable molybdopterin- 99.6 4.1E-16 1.4E-20 147.3 9.0 180 87-363 12-198 (201)
51 1e5k_A Molybdopterin-guanine d 99.6 1.6E-14 5.5E-19 136.4 13.9 110 87-227 4-116 (201)
52 1jv1_A Glcnac1P uridyltransfer 99.6 9.5E-14 3.2E-18 147.9 20.7 210 88-314 101-343 (505)
53 1w55_A ISPD/ISPF bifunctional 99.6 1.1E-14 3.7E-19 149.9 12.3 198 87-360 1-202 (371)
54 4eqy_A Acyl-[acyl-carrier-prot 99.5 1.3E-13 4.6E-18 137.1 14.0 144 374-521 24-194 (283)
55 3hsq_A Acyl-[acyl-carrier-prot 99.5 2E-13 7E-18 134.0 14.8 141 374-521 8-172 (259)
56 4e79_A UDP-3-O-acylglucosamine 99.5 4.3E-13 1.5E-17 137.7 17.4 61 460-520 229-295 (357)
57 3eh0_A UDP-3-O-[3-hydroxymyris 99.5 4.8E-13 1.7E-17 136.6 17.6 61 460-520 224-290 (341)
58 2oeg_A UTP-glucose-1-phosphate 99.5 5.9E-13 2E-17 141.0 18.0 259 88-365 74-394 (505)
59 1j2z_A Acyl-[acyl-carrier-prot 99.5 3E-13 1E-17 133.6 14.4 140 374-521 9-173 (270)
60 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 6.7E-13 2.3E-17 137.0 17.5 61 460-520 246-312 (372)
61 3ngw_A Molybdopterin-guanine d 99.5 9.5E-13 3.2E-17 125.0 17.2 115 90-237 1-117 (208)
62 1qre_A Carbonic anhydrase; bet 99.5 2.5E-13 8.6E-18 132.4 12.4 154 357-521 38-207 (247)
63 3r0s_A Acyl-[acyl-carrier-prot 99.5 4.8E-13 1.6E-17 131.9 14.4 140 374-521 12-177 (266)
64 3t57_A UDP-N-acetylglucosamine 99.5 5.2E-13 1.8E-17 134.3 14.6 148 374-521 9-201 (305)
65 4e6u_A Acyl-[acyl-carrier-prot 99.5 5.7E-13 1.9E-17 131.2 14.4 144 374-521 9-179 (265)
66 3c8v_A Putative acetyltransfer 99.4 2.2E-14 7.5E-19 152.2 3.5 99 399-519 290-391 (496)
67 3fs8_A QDTC; acetyltransferase 99.4 1.1E-12 3.7E-17 129.7 14.3 59 374-432 10-86 (273)
68 3ixc_A Hexapeptide transferase 99.4 1.3E-12 4.4E-17 122.3 13.2 117 374-520 29-156 (191)
69 2qia_A UDP-N-acetylglucosamine 99.4 1.8E-12 6.1E-17 127.4 14.4 143 375-521 8-177 (262)
70 1xhd_A Putative acetyltransfer 99.4 2.3E-12 7.8E-17 118.6 13.4 117 374-520 8-134 (173)
71 3r8y_A 2,3,4,5-tetrahydropyrid 99.4 7.1E-14 2.4E-18 135.7 3.3 140 335-505 38-195 (240)
72 3tv0_A Dynactin subunit 6; LEF 99.4 1.2E-12 4E-17 122.9 11.2 131 377-521 11-147 (194)
73 3pmo_A UDP-3-O-[3-hydroxymyris 99.4 2.5E-12 8.5E-17 132.7 12.9 170 347-521 95-295 (372)
74 4e79_A UDP-3-O-acylglucosamine 99.4 4E-12 1.4E-16 130.5 14.0 170 346-521 78-278 (357)
75 1j2z_A Acyl-[acyl-carrier-prot 99.4 2.7E-12 9.2E-17 126.8 12.2 122 379-506 26-171 (270)
76 3r3r_A Ferripyochelin binding 99.4 5.1E-12 1.7E-16 117.6 13.4 129 374-520 11-144 (187)
77 3eh0_A UDP-3-O-[3-hydroxymyris 99.4 4.2E-12 1.4E-16 129.6 13.8 169 348-521 74-273 (341)
78 3r1w_A Carbonic anhydrase; bet 99.4 5.1E-12 1.8E-16 117.7 13.2 129 374-520 15-148 (189)
79 1v3w_A Ferripyochelin binding 99.4 4.4E-12 1.5E-16 116.7 12.5 117 374-520 6-132 (173)
80 2yqc_A UDP-N-acetylglucosamine 99.4 1.1E-11 3.6E-16 131.6 17.0 213 88-315 102-352 (486)
81 3oc9_A UDP-N-acetylglucosamine 99.4 3.7E-11 1.3E-15 123.6 20.3 210 88-314 34-276 (405)
82 3hsq_A Acyl-[acyl-carrier-prot 99.3 6E-12 2E-16 123.5 13.6 122 377-505 23-169 (259)
83 3mqg_A Lipopolysaccharides bio 99.3 4.6E-12 1.6E-16 118.4 11.3 25 495-520 110-134 (192)
84 3bfp_A Acetyltransferase; LEFT 99.3 2E-11 6.8E-16 114.5 15.3 84 400-505 87-173 (194)
85 3kwd_A Carbon dioxide concentr 99.3 1.3E-11 4.5E-16 117.4 13.1 128 380-521 41-178 (213)
86 4eqy_A Acyl-[acyl-carrier-prot 99.3 1.1E-11 3.9E-16 123.1 13.0 50 470-520 126-175 (283)
87 3tk8_A 2,3,4,5-tetrahydropyrid 99.3 1.8E-12 6.1E-17 130.3 6.8 40 324-364 73-117 (316)
88 2qia_A UDP-N-acetylglucosamine 99.3 1.6E-11 5.6E-16 120.5 13.3 45 461-505 129-174 (262)
89 4e6u_A Acyl-[acyl-carrier-prot 99.3 1.9E-11 6.4E-16 120.3 13.7 46 460-505 130-176 (265)
90 3r0s_A Acyl-[acyl-carrier-prot 99.3 2.5E-11 8.5E-16 119.6 13.4 50 470-520 109-158 (266)
91 3gos_A 2,3,4,5-tetrahydropyrid 99.3 5.2E-12 1.8E-16 125.0 8.4 50 470-520 178-234 (276)
92 3ixc_A Hexapeptide transferase 99.3 2.7E-11 9.4E-16 113.2 12.7 102 400-521 33-145 (191)
93 3vbi_A ANTD, galactoside O-ace 99.3 2.7E-11 9.3E-16 114.4 12.5 33 400-432 52-86 (205)
94 3fs8_A QDTC; acetyltransferase 99.3 3.4E-11 1.2E-15 118.8 13.7 50 381-434 5-56 (273)
95 2pig_A Putative transferase; S 99.3 2.7E-11 9.2E-16 122.6 13.1 127 374-505 60-197 (334)
96 4fce_A Bifunctional protein GL 99.2 1.3E-11 4.3E-16 130.8 10.1 122 378-508 286-430 (459)
97 1xhd_A Putative acetyltransfer 99.2 8.3E-11 2.8E-15 108.1 13.4 101 401-521 13-123 (173)
98 1hm9_A GLMU, UDP-N-acetylgluco 99.2 2.6E-11 8.9E-16 128.8 11.5 122 375-505 289-432 (468)
99 3t57_A UDP-N-acetylglucosamine 99.2 7.6E-11 2.6E-15 118.4 14.0 84 376-467 5-92 (305)
100 3r3r_A Ferripyochelin binding 99.2 1E-10 3.5E-15 108.7 12.9 101 401-521 16-133 (187)
101 3tv0_A Dynactin subunit 6; LEF 99.2 1.3E-10 4.4E-15 108.9 13.4 102 400-521 12-135 (194)
102 3vbi_A ANTD, galactoside O-ace 99.2 3.8E-11 1.3E-15 113.4 9.6 87 416-521 52-167 (205)
103 3r1w_A Carbonic anhydrase; bet 99.2 1.4E-10 4.7E-15 108.0 13.1 101 401-521 20-137 (189)
104 2pig_A Putative transferase; S 99.2 9.3E-11 3.2E-15 118.7 12.3 109 375-486 74-196 (334)
105 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.2 4.1E-10 1.4E-14 116.3 16.9 58 374-431 126-187 (374)
106 2v0h_A Bifunctional protein GL 99.2 4.9E-11 1.7E-15 126.1 10.1 143 374-519 273-435 (456)
107 3jqy_B NEUO, polysialic acid O 99.2 1.9E-10 6.4E-15 112.3 13.0 106 399-521 62-196 (252)
108 1v3w_A Ferripyochelin binding 99.1 3.6E-10 1.2E-14 103.8 12.5 101 401-521 11-121 (173)
109 3mqg_A Lipopolysaccharides bio 99.1 3.2E-10 1.1E-14 105.8 12.0 108 374-505 5-132 (192)
110 2ggo_A 401AA long hypothetical 99.1 2.3E-10 8E-15 118.9 12.2 122 377-520 255-398 (401)
111 4ea9_A Perosamine N-acetyltran 99.1 5E-10 1.7E-14 106.9 12.7 20 347-366 75-94 (220)
112 3eg4_A 2,3,4,5-tetrahydropyrid 99.1 7.4E-11 2.5E-15 118.1 6.9 19 417-435 171-189 (304)
113 3eg4_A 2,3,4,5-tetrahydropyrid 99.1 2.6E-10 8.8E-15 114.1 10.5 16 470-485 203-218 (304)
114 3kwd_A Carbon dioxide concentr 99.1 5E-10 1.7E-14 106.4 11.9 100 402-521 41-161 (213)
115 3r8y_A 2,3,4,5-tetrahydropyrid 99.1 4.1E-10 1.4E-14 109.1 11.3 116 374-505 93-211 (240)
116 1qre_A Carbonic anhydrase; bet 99.0 7.7E-10 2.6E-14 107.6 11.6 101 401-521 60-190 (247)
117 3r5d_A Tetrahydrodipicolinate 99.0 3E-10 1E-14 112.7 6.0 47 460-515 238-293 (347)
118 3tk8_A 2,3,4,5-tetrahydropyrid 99.0 1.8E-09 6E-14 108.5 11.1 28 459-486 219-247 (316)
119 3r5d_A Tetrahydrodipicolinate 99.0 2.3E-09 7.7E-14 106.5 11.5 15 507-521 273-287 (347)
120 3jqy_B NEUO, polysialic acid O 99.0 1.2E-09 4E-14 106.7 9.2 83 399-505 84-193 (252)
121 2wlg_A Polysialic acid O-acety 99.0 2E-09 6.8E-14 102.4 10.6 27 401-427 59-90 (215)
122 3fsy_A Tetrahydrodipicolinate 99.0 5.6E-10 1.9E-14 110.0 6.8 25 460-484 215-248 (332)
123 3c8v_A Putative acetyltransfer 99.0 1.3E-09 4.5E-14 115.5 10.1 93 374-485 281-380 (496)
124 3gos_A 2,3,4,5-tetrahydropyrid 99.0 2.3E-09 7.7E-14 106.0 11.1 40 459-498 178-218 (276)
125 3fsy_A Tetrahydrodipicolinate 98.8 1.3E-08 4.6E-13 100.3 11.7 9 347-355 123-131 (332)
126 3nz2_A Hexapeptide-repeat cont 98.8 4.7E-09 1.6E-13 98.4 7.0 51 382-435 60-115 (195)
127 2wlg_A Polysialic acid O-acety 98.8 1.4E-08 4.8E-13 96.4 10.3 18 469-486 100-117 (215)
128 3nz2_A Hexapeptide-repeat cont 98.8 1.9E-08 6.7E-13 94.1 10.9 29 403-431 59-91 (195)
129 3ftt_A Putative acetyltransfer 98.8 9.5E-09 3.3E-13 96.5 8.8 51 383-435 59-113 (199)
130 4hur_A Virginiamycin A acetylt 98.8 3.2E-09 1.1E-13 101.4 5.4 31 469-505 119-149 (220)
131 2rij_A Putative 2,3,4,5-tetrah 98.8 1.6E-08 5.3E-13 103.3 10.7 23 343-365 168-192 (387)
132 4ea9_A Perosamine N-acetyltran 98.8 1.6E-08 5.6E-13 96.3 10.1 46 460-505 149-195 (220)
133 3srt_A Maltose O-acetyltransfe 98.8 1.1E-08 3.7E-13 95.3 7.9 52 381-434 59-114 (188)
134 3hjj_A Maltose O-acetyltransfe 98.8 2.9E-08 9.8E-13 92.5 10.6 51 384-436 64-118 (190)
135 3st8_A Bifunctional protein GL 98.8 3.3E-08 1.1E-12 105.9 12.6 85 401-511 353-446 (501)
136 3bfp_A Acetyltransferase; LEFT 98.7 3.5E-08 1.2E-12 92.2 10.1 46 460-505 133-179 (194)
137 1krr_A Galactoside O-acetyltra 98.7 3.5E-08 1.2E-12 92.9 9.1 52 381-434 58-113 (203)
138 3q1x_A Serine acetyltransferas 98.7 2.9E-08 9.9E-13 99.2 8.9 53 416-486 183-240 (313)
139 3q1x_A Serine acetyltransferas 98.7 2.1E-08 7.2E-13 100.2 7.0 83 401-486 170-258 (313)
140 1krr_A Galactoside O-acetyltra 98.7 1.7E-07 5.9E-12 88.1 12.8 33 473-505 129-161 (203)
141 3brk_X Glucose-1-phosphate ade 98.6 5.7E-08 1.9E-12 101.7 9.5 66 401-486 303-374 (420)
142 4hur_A Virginiamycin A acetylt 98.6 2.1E-08 7.2E-13 95.7 5.5 33 459-491 120-153 (220)
143 1ocx_A Maltose O-acetyltransfe 98.6 4.7E-08 1.6E-12 90.4 7.2 36 399-434 71-110 (182)
144 1yp2_A Glucose-1-phosphate ade 98.6 5E-08 1.7E-12 103.0 8.2 100 399-519 313-436 (451)
145 3ftt_A Putative acetyltransfer 98.6 1.8E-07 6.1E-12 87.8 11.0 72 416-505 74-160 (199)
146 3hjj_A Maltose O-acetyltransfe 98.6 1.4E-07 4.9E-12 87.7 10.2 85 403-505 60-164 (190)
147 3srt_A Maltose O-acetyltransfe 98.6 3.5E-07 1.2E-11 84.9 12.6 85 403-505 59-162 (188)
148 2p2o_A Maltose transacetylase; 98.6 3.1E-07 1.1E-11 85.1 11.9 36 399-434 73-112 (185)
149 2p2o_A Maltose transacetylase; 98.6 7.3E-08 2.5E-12 89.4 7.5 13 493-505 148-160 (185)
150 3mc4_A WW/RSP5/WWP domain:bact 98.6 9.4E-08 3.2E-12 94.1 8.5 79 402-486 172-251 (287)
151 3mc4_A WW/RSP5/WWP domain:bact 98.6 2.4E-07 8.1E-12 91.3 11.3 78 400-505 164-246 (287)
152 1ssq_A SAT, serine acetyltrans 98.6 1.2E-07 4E-12 92.8 8.9 28 205-232 19-48 (267)
153 3r3i_A UTP--glucose-1-phosphat 98.6 4.8E-06 1.7E-10 87.8 21.3 346 86-478 124-525 (528)
154 3f1x_A Serine acetyltransferas 98.5 1.7E-07 5.7E-12 93.5 8.5 21 416-436 210-230 (310)
155 1ocx_A Maltose O-acetyltransfe 98.5 7.3E-07 2.5E-11 82.4 10.8 13 493-505 146-158 (182)
156 2rij_A Putative 2,3,4,5-tetrah 98.4 1.4E-07 4.7E-12 96.3 5.4 37 470-515 291-327 (387)
157 1ssq_A SAT, serine acetyltrans 98.4 4.5E-07 1.5E-11 88.6 8.5 79 401-485 144-223 (267)
158 1t3d_A SAT, serine acetyltrans 98.4 1.2E-06 4.1E-11 86.4 11.2 28 205-232 39-68 (289)
159 3f1x_A Serine acetyltransferas 98.4 1.2E-06 4.2E-11 87.3 10.3 34 402-435 198-235 (310)
160 3gue_A UTP-glucose-1-phosphate 98.3 0.00038 1.3E-08 72.9 28.6 346 87-473 74-482 (484)
161 3eev_A Chloramphenicol acetylt 98.3 5.4E-07 1.8E-11 85.3 6.5 31 469-505 111-141 (212)
162 1t3d_A SAT, serine acetyltrans 98.3 1E-06 3.5E-11 86.9 8.5 79 401-485 164-243 (289)
163 3eev_A Chloramphenicol acetylt 98.2 2.7E-06 9.1E-11 80.5 8.3 33 459-491 112-145 (212)
164 4e8l_A Virginiamycin A acetylt 98.2 1.1E-06 3.8E-11 83.5 5.4 31 469-505 118-148 (219)
165 1xat_A Xenobiotic acetyltransf 98.2 1.1E-06 3.8E-11 83.1 4.6 17 415-431 55-71 (212)
166 1mr7_A Streptogramin A acetylt 98.2 1.9E-06 6.5E-11 81.4 5.9 16 416-431 60-75 (209)
167 1xat_A Xenobiotic acetyltransf 98.1 1.2E-05 4.1E-10 76.0 10.0 38 399-436 21-70 (212)
168 4e8l_A Virginiamycin A acetylt 98.0 3.4E-06 1.2E-10 80.1 5.4 33 459-491 119-152 (219)
169 1mr7_A Streptogramin A acetylt 97.9 5.7E-06 1.9E-10 78.1 4.4 37 399-435 28-73 (209)
170 3ogz_A UDP-sugar pyrophosphory 97.4 0.0072 2.5E-07 64.9 18.7 215 88-314 113-374 (630)
171 2i5e_A Hypothetical protein MM 96.6 0.0052 1.8E-07 57.4 8.1 105 88-226 2-111 (211)
172 3cgx_A Putative nucleotide-dip 87.9 2.2 7.6E-05 40.4 9.5 116 89-229 4-129 (242)
173 3bcv_A Putative glycosyltransf 84.7 8.1 0.00028 35.3 11.6 99 122-238 18-119 (240)
174 1qg8_A Protein (spore coat pol 79.2 35 0.0012 31.2 13.9 99 121-234 13-120 (255)
175 1xhb_A Polypeptide N-acetylgal 60.5 1.1E+02 0.0039 31.0 13.9 98 122-235 43-146 (472)
176 2z86_A Chondroitin synthase; G 49.5 1.1E+02 0.0039 32.2 12.1 96 122-234 106-205 (625)
177 4fix_A UDP-galactofuranosyl tr 47.2 1E+02 0.0036 33.3 11.3 95 122-234 193-299 (657)
178 2z86_A Chondroitin synthase; G 45.8 1.4E+02 0.0048 31.5 12.1 93 121-231 387-482 (625)
179 2d7i_A Polypeptide N-acetylgal 41.4 1.7E+02 0.006 30.7 11.9 94 122-232 126-225 (570)
180 2ffu_A Ppgalnact-2, polypeptid 40.3 1.7E+02 0.0059 29.9 11.4 91 123-234 81-177 (501)
181 3ckj_A Putative uncharacterize 35.0 1.8E+02 0.0061 27.9 10.0 50 187-239 117-169 (329)
182 3f1y_A Mannosyl-3-phosphoglyce 28.6 2.1E+02 0.0071 28.5 9.3 51 187-240 165-218 (387)
183 2xvy_A Chelatase, putative; me 24.9 76 0.0026 29.8 5.0 23 122-144 65-87 (269)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=1.3e-62 Score=524.18 Aligned_cols=448 Identities=95% Similarity=1.443 Sum_probs=366.7
Q ss_pred CCCCCCCCCCCCcCCccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHH
Q 009971 73 SDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNR 152 (521)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~ 152 (521)
+++.....+.++..|++|+|||||||.|+||+|||..+||+|+||+|++|||+|++++|.++|+++|+|+++++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~ 83 (451)
T 1yp2_A 4 SDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNR 83 (451)
T ss_dssp ------CCCCSSCHHHHEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHH
T ss_pred ccccccceecCcccccceEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHH
Confidence 44555566777777778999999999999999999999999999998669999999999999999999999999899999
Q ss_pred HHHHhhhccCCCCcCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeeccccHHHHHHHHHhcC
Q 009971 153 HLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETD 232 (521)
Q Consensus 153 ~l~~~~~~~~~~~~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~dl~~ll~~h~~~~ 232 (521)
|+.+.+..++..++..+.++++...|.+.+++|..||+++++.++.+++....++||+++||++++.++.++++.|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~ 163 (451)
T 1yp2_A 84 HLSRAYASNMGGYKNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETD 163 (451)
T ss_dssp HHHHHCC--------CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTT
T ss_pred HHhhhhhcccccccccCcEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcC
Confidence 99864310111000123356666556555667889999999999988864335799999999999999999999999999
Q ss_pred CcEEEEEEecCcccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHH
Q 009971 233 ADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNL 312 (521)
Q Consensus 233 aditi~~~~~~~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~l 312 (521)
+++|+++.+.+.+++..||++.+|++++|+.|.|||..+..+.++++.+++...+......++++++|+|+|++++|.++
T Consensus 164 ~~~tl~~~~~~~~~~~~~g~v~~d~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~ 243 (451)
T 1yp2_A 164 ADITVAALPMDEKRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNL 243 (451)
T ss_dssp CSEEEEEEEECHHHHTTSEEEEECTTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHH
T ss_pred CcEEEEEEEcChhhcccCCEEEECCCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHH
Confidence 99999888765445678999999988999999999987766667777777766544333356799999999999998777
Q ss_pred HhhhCCCCCChhhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhcccCCCCCccccccCCCcccCCCCcCCCce
Q 009971 313 LRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFRYFYDRSAPIYTQPRYLPPSK 392 (521)
Q Consensus 313 l~~~~~~~~d~~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 392 (521)
+++.++...+|.+++|+.+++++.+++++.++++|.||||+++|++|++.++.+..+..+ ++++++++++.+.+.|++.
T Consensus 244 l~~~~~~~~~~~~~~l~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~~~~-~~~~~~~i~~~~~i~~~~~ 322 (451)
T 1yp2_A 244 LRDKFPGANDFGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFS-FYDRSAPIYTQPRYLPPSK 322 (451)
T ss_dssp HHTTCTTCCCTTTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSCSSC-SCCSSSCCCCCCCCCCCEE
T ss_pred HHhhcccccchHhhHHHHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhcccccchh-ccCCCCeeccCCccCCCeE
Confidence 776555566787899999988678999999999999999999999999999887656666 8899999999999999999
Q ss_pred eecccccceEECCCcEEceeEEeeeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEeeeEE
Q 009971 393 MLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAII 472 (521)
Q Consensus 393 i~~~~i~~~~Ig~~~~I~~~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii 472 (521)
+.++.|.++.||++|+|+.|.|.+++||++|.||++|+|++++++++++++...........|.+.+.||+++.|.+++|
T Consensus 323 i~~~~I~~~~Ig~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~I 402 (451)
T 1yp2_A 323 MLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAII 402 (451)
T ss_dssp EEEEEEEEEEECTTCEEEEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEE
T ss_pred EcceEEeCeEECCCCEEcceEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEe
Confidence 98888889999999999988888999999999999999999999998777654332222223333368999999999999
Q ss_pred CCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 473 DKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 473 ~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
|++|.||++++|.+.+++.++.++|++++|++|.|+||++++||+||+|
T Consensus 403 g~~~~IG~~~~i~~~~~~~~~~~ig~~~~ig~~~v~Ig~~a~i~agsvv 451 (451)
T 1yp2_A 403 DKNARIGDNVKIINKDNVQEAARETDGYFIKSGIVTVIKDALIPSGIII 451 (451)
T ss_dssp CTTCEECTTCEECCSSCCSCEEEGGGTEEEETTEEEECTTCEECTTCBC
T ss_pred CCCcEECCCCEEeCCcccccCceeCCCEEEcCCEEEECCCcEECCCccC
Confidence 9999999999999999998888999999999998899999999999987
No 2
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=7.8e-51 Score=429.43 Aligned_cols=384 Identities=33% Similarity=0.593 Sum_probs=301.1
Q ss_pred CCccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCC
Q 009971 86 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGY 165 (521)
Q Consensus 86 ~~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~ 165 (521)
+|++|+|||||||.|+||+|||..+||+|+|++|++|||+|++++|.++|+++|+|+++++.+++.+|+.+.|... ..
T Consensus 9 mm~~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~~~--~~ 86 (420)
T 3brk_X 9 LARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGWDFF--RP 86 (420)
T ss_dssp GGGGEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHSCCC--CG
T ss_pred hhhceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhhhccc--cc
Confidence 3567999999999999999999999999999998658999999999999999999999998899999998753210 00
Q ss_pred cCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeeccccHHHHHHHHHhcCCcEEEEEEecCcc
Q 009971 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEK 245 (521)
Q Consensus 166 ~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~dl~~ll~~h~~~~aditi~~~~~~~~ 245 (521)
+....+.++...+...++.|..||+++++.++.+++....++||+++||++++.++.++++.|+++++++|+++.+.+.+
T Consensus 87 ~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~ 166 (420)
T 3brk_X 87 ERNESFDILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRM 166 (420)
T ss_dssp GGTCEEEEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETT
T ss_pred cccCCEEEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCcc
Confidence 01123555544332113567799999999999888643347899999999998999999999999999999998876544
Q ss_pred cCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCC---CCCC
Q 009971 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP---GAND 322 (521)
Q Consensus 246 ~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~---~~~d 322 (521)
++..||++.+|++++|+.|.|||..+... . .....+++++|+|+|++++|.+++++..+ ...+
T Consensus 167 ~~~~~g~v~~d~~g~v~~~~ekp~~~~~~--~------------~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~ 232 (420)
T 3brk_X 167 EATGFGVMHVNEKDEIIDFIEKPADPPGI--P------------GNEGFALASMGIYVFHTKFLMEAVRRDAADPTSSRD 232 (420)
T ss_dssp GGGGSEEEEECTTSBEEEEEESCSSCCCB--T------------TBTTEEEEEEEEEEEEHHHHHHHHTSSCCC------
T ss_pred ccCcccEEEECCCCcEEEeEeCCCccccc--c------------ccccceEEeeeeEEEeHHHHHHHHHHhcccCCcccc
Confidence 56789999999889999999998643210 0 00124699999999999988767754332 1235
Q ss_pred hhhcchHhhhhCCceEEEEEe-----------cceEEecCCHHHHHHHhhhcccCCCCCccccccCCCcccCCCCcCCCc
Q 009971 323 FGSEVIPGATSIGMRVQAYLY-----------DGYWEDIGTIEAFYNANLGITKKPIPDFRYFYDRSAPIYTQPRYLPPS 391 (521)
Q Consensus 323 ~~~dil~~li~~~~~I~~~~~-----------~g~w~dIgt~edy~~An~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~~ 391 (521)
|..++++.+++++ ++++|.+ +++|.||||+++|++|++.++.+. +... ++.+.+++++.+.+.|++
T Consensus 233 ~~~d~l~~li~~g-~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~-~~~~-~~~~~~~i~~~~~i~~~~ 309 (420)
T 3brk_X 233 FGKDIIPYIVEHG-KAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVV-PDLD-IYDKSWPIWTYAEITPPA 309 (420)
T ss_dssp ----CTTHHHHHS-CEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSS-CSSC-TTCCSSCCCCCCCCCCCC
T ss_pred chHHHHHHHhhhC-cEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCC-chhh-cCCCCCceeeccccCCCc
Confidence 6689999998855 9999999 889999999999999999998765 4445 667888999999999999
Q ss_pred eeec------ccccceEECCCcEEceeEEeeeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCC
Q 009971 392 KMLD------ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNS 465 (521)
Q Consensus 392 ~i~~------~~i~~~~Ig~~~~I~~~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~ 465 (521)
.+.. +.+.++.||++|+|.++.|.+++||++|.||++|.|++++++++ +.||+++
T Consensus 310 ~i~~~~~~~~~~i~~~~ig~~~~I~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~-------------------~~i~~~~ 370 (420)
T 3brk_X 310 KFVHDDEDRRGSAVSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVVLPS-------------------VKIGRHA 370 (420)
T ss_dssp EEECBCSSCBCEEESCEECSSCEEESCEEESCEECTTCEECTTCEEEEEEECTT-------------------CEECTTC
T ss_pred EEecccccCCcEecCCEECCCCEEcCCEEeCcEEcCCCEECCCCEEcceEEcCC-------------------CEECCCC
Confidence 9873 66789999999999448999999999999999999999999887 6899999
Q ss_pred EEeeeEECCCCEECCCcEEeCCCccCCceeecCCeEE-cCCeEEECCC
Q 009971 466 HIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFI-KSGIVTIIKD 512 (521)
Q Consensus 466 ~i~~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I-~~g~v~I~~~ 512 (521)
+|.+|+||++|.||+++++.+.... ..++.+| ..|+++|.++
T Consensus 371 ~i~~~~ig~~~~i~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~~ 413 (420)
T 3brk_X 371 QLSNVVIDHGVVIPEGLIVGEDPEL-----DAKRFRRTESGICLITQS 413 (420)
T ss_dssp EEEEEEECTTCEECTTCEESSCHHH-----HHHHSEECTTSCEEECHH
T ss_pred EEeceEECCCCEECCCCEEeCCCCC-----CCceEEEecCceEEEecc
Confidence 9999999999999999999853221 1123666 5675566544
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=4.7e-45 Score=393.62 Aligned_cols=391 Identities=17% Similarity=0.187 Sum_probs=283.1
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhh-hccCCCC
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY-ASNMGGY 165 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~-~~~~~~~ 165 (521)
+..+.+||||||+||||+|+| ||||+||+|+ |||+|+|++|.++|+++|+|+++|..+++++|+.+.. .++.
T Consensus 10 ~~~~~vvILAaG~GtRm~~~~---pK~l~pv~gk-p~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~--- 82 (501)
T 3st8_A 10 PGDTAVLVLAAGPGTRMRSDT---PKVLHTLAGR-SMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTLGR--- 82 (501)
T ss_dssp --CEEEEEEECSCCGGGCCSS---CGGGCEETTE-EHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHHHHHTS---
T ss_pred CCCceEEEECCcCcccCCCCC---CHHHeEECCh-hHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHHHhcCC---
Confidence 346899999999999999975 9999999986 9999999999999999999999999999999998632 2211
Q ss_pred cCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEEecC
Q 009971 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMD 243 (521)
Q Consensus 166 ~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~~~~ 243 (521)
. ++++ .| ++++||++||+++++++.+...+++|+++||. |+. ..+.++++.|+++++++|+++.+.+
T Consensus 83 ---~-i~~~--~q-----~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~ 151 (501)
T 3st8_A 83 ---T-IDVA--LQ-----DRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLD 151 (501)
T ss_dssp ---C-CEEE--EC-----SSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS
T ss_pred ---c-EEEE--Ec-----CCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccC
Confidence 1 2332 22 23599999999999988765567899999999 555 4599999999999999999998876
Q ss_pred cccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCC---CC
Q 009971 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP---GA 320 (521)
Q Consensus 244 ~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~---~~ 320 (521)
++..||.+..|++|+|+.|.||++.+..+. ..+++++|+|+|++++|..++..... ..
T Consensus 152 --dp~~yG~i~~~~~g~v~~ivEk~~~~~~~~-----------------~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~ 212 (501)
T 3st8_A 152 --DPFGYGRILRTQDHEVMAIVEQTDATPSQR-----------------EIREVNAGVYAFDIAALRSALSRLSSNNAQQ 212 (501)
T ss_dssp --CCTTSCEEEECTTCCEEEEECGGGCCHHHH-----------------HCCEEEEEEEEEEHHHHHHHHTTCCCCSTTC
T ss_pred --CchhccccccccceeEEeeccccCCChhhc-----------------cceeeeceeeeecchhHHHhhhhhccccccc
Confidence 478999999999999999999976543211 13589999999999999888764322 23
Q ss_pred CChhhcchHhhhhCCceEEEEEecceEEec--CCHHHHHHHhhhcc--------cCC----CCCccccccCCCcccCCCC
Q 009971 321 NDFGSEVIPGATSIGMRVQAYLYDGYWEDI--GTIEAFYNANLGIT--------KKP----IPDFRYFYDRSAPIYTQPR 386 (521)
Q Consensus 321 ~d~~~dil~~li~~~~~I~~~~~~g~w~dI--gt~edy~~An~~ll--------~~~----~~~~~~~~~~~~~i~~~~~ 386 (521)
..+.++++..+...+..+.++..+..|... ++...+.++...+. ... .|... +++.+..|...+.
T Consensus 213 e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~-~i~~dv~IG~dv~ 291 (501)
T 3st8_A 213 ELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATT-WIDVDVTIGRDTV 291 (501)
T ss_dssp SCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGE-EECTTCEECTTCE
T ss_pred ccchhhHHHHHHhcCceEEEEeccchhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccc-cccCceEECCcce
Confidence 445688888888889999999998776554 44444444332221 111 12222 4555566666666
Q ss_pred cCCCceeec-ccc-cceEECCCcEEce-----------eEEeeeEECCCCEECCCCEEcceEEECC-----ccccccccc
Q 009971 387 YLPPSKMLD-ADV-TDSVIGEGCVIKN-----------CKIHHSVVGLRSCISEGAIIEDTLLMGA-----DYYETDADR 448 (521)
Q Consensus 387 ~~~~~~i~~-~~i-~~~~Ig~~~~I~~-----------~~I~~s~ig~~~~Ig~~~~I~~s~i~~~-----~~~e~~~~~ 448 (521)
+.+++.+.+ +.+ .+++|+++|.+.+ +.+..+.+|.++.|+++++|...+++++ +|+|. +
T Consensus 292 I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~i---k 368 (501)
T 3st8_A 292 IHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEV---K 368 (501)
T ss_dssp ECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEE---E
T ss_pred ecceeeecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccccccCCeEEE---c
Confidence 666665542 111 2233333333332 2233334445554444444443222222 12222 5
Q ss_pred cccccCCCcceeeCCCCEEeeeEECCCCEECCCcEEeCCCccCCc-eeecCCeEEcCCe-----EEECCCCEECCCccC
Q 009971 449 RFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEA-ARETDGYFIKSGI-----VTIIKDALIPSGTII 521 (521)
Q Consensus 449 ~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~~~~~-~~~~~~~~I~~g~-----v~I~~~~~i~~gsvi 521 (521)
++.||+|+ .|++.+++.+++||+||.||+++++.|.+++.+. +.||++|+||++. |+||++|+|++||+|
T Consensus 369 ~s~Ig~gs---kI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ags~v 444 (501)
T 3st8_A 369 NSTIGTGT---KVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVV 444 (501)
T ss_dssp SCEECTTC---EEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEE
T ss_pred cceecCCc---EEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCCcEECCCCEECCCCEE
Confidence 67788887 8999999999999999999999999999998776 6689999998773 889999999999986
No 4
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=1.5e-43 Score=378.47 Aligned_cols=384 Identities=19% Similarity=0.225 Sum_probs=264.3
Q ss_pred EEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcCCC
Q 009971 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEG 169 (521)
Q Consensus 90 ~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 169 (521)
-+|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|++++..+++.+++.+.
T Consensus 12 ~~~vIlAaG~g~R~~~---~~pK~l~~i~gk-pli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~~------------ 75 (468)
T 1hm9_A 12 NFAIILAAGKGTRMKS---DLPKVLHKVAGI-SMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAGQ------------ 75 (468)
T ss_dssp EEEEEECCCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSSS------------
T ss_pred CcEEEEcCCCCccCCC---CCCcEeeEECCc-cHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCCC------------
Confidence 4899999999999984 789999999987 999999999999999999999998877777665431
Q ss_pred cEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe--eccccHHHHHHHHHhcCCcEEEEEEecCcccC
Q 009971 170 FVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH--LYRMDYERFIQAHRETDADITVAALPMDEKRA 247 (521)
Q Consensus 170 ~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~--l~~~dl~~ll~~h~~~~aditi~~~~~~~~~~ 247 (521)
++++. + .+..|++++++.++..++. ..++||+++||+ +...++.++++.|++.++++++++.+.++ +
T Consensus 76 -i~~v~--~-----~~~~G~~~sl~~a~~~~~~-~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~~--~ 144 (468)
T 1hm9_A 76 -TEFVT--Q-----SEQLGTGHAVMMTEPILEG-LSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDN--P 144 (468)
T ss_dssp -SEEEE--C-----SSCCCHHHHHHTTHHHHTT-CCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSC--C
T ss_pred -cEEEe--C-----CccCChHHHHHHHHHHhcc-CCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccCC--C
Confidence 23332 1 1248999999999988752 247899999999 45677999999999988999888877643 5
Q ss_pred cceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCC---CCChh
Q 009971 248 TAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG---ANDFG 324 (521)
Q Consensus 248 ~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~---~~d~~ 324 (521)
..|+.+..|++++|..|.|||..... ....+++++|+|+|+++.|.+++++.... ...+.
T Consensus 145 ~~~g~v~~d~~g~v~~~~ek~~~~~~-----------------~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~~ 207 (468)
T 1hm9_A 145 FGYGRIVRNDNAEVLRIVEQKDATDF-----------------EKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYI 207 (468)
T ss_dssp TTSCEEEECTTCCEEEEECTTTCCTT-----------------GGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCCT
T ss_pred CceeEEEECCCCCEEEEEECCCCChH-----------------HhcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEEH
Confidence 67999999888999999998752110 01246999999999999776666543322 22345
Q ss_pred hcchHhhhhCCceEEEEEecceEEe--cCCHHHHHHHhhhcccCC------------CCCccccccCCCcccCCCCcCCC
Q 009971 325 SEVIPGATSIGMRVQAYLYDGYWED--IGTIEAFYNANLGITKKP------------IPDFRYFYDRSAPIYTQPRYLPP 390 (521)
Q Consensus 325 ~dil~~li~~~~~I~~~~~~g~w~d--Igt~edy~~An~~ll~~~------------~~~~~~~~~~~~~i~~~~~~~~~ 390 (521)
+++++.+++.+.+++++.++++|.+ |+|++||..|+..+..+. .|... ++++.+.|..++.+.|+
T Consensus 208 ~d~~~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~i~~~~~i~~~ 286 (468)
T 1hm9_A 208 TDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEAT-YIDIDVEIAPEVQIEAN 286 (468)
T ss_dssp THHHHHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGC-EECTTCEECTTCEECSS
T ss_pred HHHHHHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCee-EECCCcEECCCCEECCC
Confidence 8999999887889999999999977 559999999987553221 11111 33333444433333333
Q ss_pred ceee-------------cccccceEECCCcEEceeEEeeeEECCCCEECCCCEEc-ceEEECCcccccccc-ccccccCC
Q 009971 391 SKML-------------DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIE-DTLLMGADYYETDAD-RRFLAAKG 455 (521)
Q Consensus 391 ~~i~-------------~~~i~~~~Ig~~~~I~~~~I~~s~ig~~~~Ig~~~~I~-~s~i~~~~~~e~~~~-~~~~~~~~ 455 (521)
+.+. ++.|.++.||++|.|+.+.|.+++||++|.||++|.|. ++++..+........ .++.|+++
T Consensus 287 ~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~Ig~~ 366 (468)
T 1hm9_A 287 VILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGEN 366 (468)
T ss_dssp CEEESSCEECTTCEECTTCEEESCEECTTCEECSCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESCEECTT
T ss_pred cEECCCCEECCCCEECCCCEEeccEEeCCcEEEEEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeeeEEcCC
Confidence 3332 23334445555555555455566666666666666666 333333222111111 23333444
Q ss_pred CcceeeCCCCEEeeeEECCCCEECCCcEEeCCCccCC-ceeecCCeEEcCCe-----EEECCCCEECCCccC
Q 009971 456 SVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQE-AARETDGYFIKSGI-----VTIIKDALIPSGTII 521 (521)
Q Consensus 456 ~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~~~~-~~~~~~~~~I~~g~-----v~I~~~~~i~~gsvi 521 (521)
+ .|++.+.+.++.||++|.||+++++.+.++... .+.+|++++|+.+. ++||++++|++||+|
T Consensus 367 ~---~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~i~~~s~v 435 (468)
T 1hm9_A 367 T---KAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTI 435 (468)
T ss_dssp C---EEEEEEEEESEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSCEECTTCEECTTCEE
T ss_pred c---EeCCceEEccccccCCcEECCCcEEecCcCccCCCcEECCCeEECCCCEEeCCcEECCCCEECCCCEE
Confidence 3 344444455678999999999999987554433 34566666665552 678999999998875
No 5
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=2.6e-44 Score=376.89 Aligned_cols=356 Identities=19% Similarity=0.282 Sum_probs=266.9
Q ss_pred EEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcCCC
Q 009971 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEG 169 (521)
Q Consensus 90 ~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 169 (521)
|+|||||||.|+||+|||..+||+|+|++|+ |||+|++++|.++|+++|+|++++. +.+++.+.+.
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~~---------- 66 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSK-PLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKLK---------- 66 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHCT----------
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCE-eHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccCC----------
Confidence 6899999999999999999999999999986 9999999999999999999999876 7777765311
Q ss_pred cEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeecc--ccHHHHHHHHHhcCCcEEEEEEecCcccC
Q 009971 170 FVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYR--MDYERFIQAHRETDADITVAALPMDEKRA 247 (521)
Q Consensus 170 ~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~--~dl~~ll~~h~~~~aditi~~~~~~~~~~ 247 (521)
.+.++.. +.|+.|++++++.++. .++||+++||+++. .+++++++ .++.++++.+.++ +
T Consensus 67 ~i~~~~~------~~~~~g~~~~l~~~~~------~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~~--~ 127 (401)
T 2ggo_A 67 EISIVTQ------KDDIKGTGAAILSAKF------NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVSN--P 127 (401)
T ss_dssp TCEEEEC------CTTCCBSTTTGGGCCC------SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECSC--C
T ss_pred cEEEEeC------CCCCCChHHHHHHhcc------CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcCC--C
Confidence 1333321 1134788888876543 36899999999776 56877776 3567888777543 4
Q ss_pred cceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCC-CCCCh-hh
Q 009971 248 TAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP-GANDF-GS 325 (521)
Q Consensus 248 ~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~-~~~d~-~~ 325 (521)
..|+.+..+++|++..+.|||..+. ++++++|+|+|++++|+. ++...+ ...++ ..
T Consensus 128 ~~~~~v~~~~~g~v~~~~ek~~~~~---------------------~~~~~~Giy~~~~~~~~~-l~~~~~~~~~~~~~~ 185 (401)
T 2ggo_A 128 KDYGVLVLDNQNNLSKIIEKPEIPP---------------------SNLINAGIYKLNSDIFTY-LDKISISERGELELT 185 (401)
T ss_dssp SSSCEEEECTTSSEEEEECSCSSCS---------------------CSEEEEEEEEEETHHHHH-HHHSCCCSSSCBCHH
T ss_pred cceeEEEECCCCeEEEEEECCCCCC---------------------CcEEEEEEEEEcHHHHHH-hhhcCcCCCCceEHH
Confidence 5788888888899999999885431 469999999999999864 443322 11222 36
Q ss_pred cchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhcccCCC-CCccccccCCCcccCCCCcCCCceee-cccc-cceE
Q 009971 326 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPI-PDFRYFYDRSAPIYTQPRYLPPSKML-DADV-TDSV 402 (521)
Q Consensus 326 dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~~~~-~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~ 402 (521)
++++.+ +.+.+++++..+++|.||+||+||..|++.++.+.. +....++++.+.+...+.+.+.+.+. ++.+ .++.
T Consensus 186 ~~~~~~-~~g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~ 264 (401)
T 2ggo_A 186 DAINLM-AKDHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVY 264 (401)
T ss_dssp HHHHHH-HHHSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEESSEE
T ss_pred HHHHHH-HCCCcEEEEEecceEEcCCCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeE
Confidence 788877 546789999999999999999999999998876543 21111445555555555555555553 3444 4678
Q ss_pred ECCCcEEce-eEEe-eeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEeeeEECCCCEECC
Q 009971 403 IGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGD 480 (521)
Q Consensus 403 Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~ 480 (521)
||++|.|+. |.|. +++||++|.||++|.|++++++++ +.|++++.|.+++||+++.||+
T Consensus 265 Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~-------------------~~i~~~~~i~~~~Ig~~~~Ig~ 325 (401)
T 2ggo_A 265 IGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEG-------------------SKIPHLSYVGDSVIAEDVNFGA 325 (401)
T ss_dssp ECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTT-------------------CEEEESCEEESCEECTTCEECT
T ss_pred ECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCC-------------------cEECCCceEcceEECCCcEECC
Confidence 899999977 8887 789999999999999988887776 5899999999999999999999
Q ss_pred CcEEeC------------------------CCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 481 NVKIVN------------------------SDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 481 ~~~i~~------------------------~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
++.|.+ ...+++++.+|.+++|..| ++||++++|++||+|
T Consensus 326 ~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~g-v~Ig~~~vi~~gsvv 389 (401)
T 2ggo_A 326 GTLIANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPG-VKIGAYARIYPGAVV 389 (401)
T ss_dssp TCEECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred CcEEcCcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEcCC-cEECCCcEECCCCeE
Confidence 999973 2334444444445555555 778888888888764
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=9.4e-43 Score=371.19 Aligned_cols=383 Identities=17% Similarity=0.189 Sum_probs=263.3
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcC
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (521)
|+|.|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|++++..+++.+++.+. .
T Consensus 7 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~~-~-------- 73 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYS---DLPKVLHPLAGK-PMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLADP-S-------- 73 (459)
T ss_dssp CCEEEEEEECCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC-------------
T ss_pred CcceEEEECCCCCccCCC---CCCcccCeeCCe-eHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhccC-C--------
Confidence 479999999999999996 789999999986 999999999999999999999999888888887651 1
Q ss_pred CCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe--eccccHHHHHHHHHhcCCcEEEEEEecCcc
Q 009971 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH--LYRMDYERFIQAHRETDADITVAALPMDEK 245 (521)
Q Consensus 168 ~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~--l~~~dl~~ll~~h~~~~aditi~~~~~~~~ 245 (521)
++++. + .+..|++++++.++..+++ .++||+++||+ +...++.++++.|++ .+++++..+..+
T Consensus 74 ---~~~v~--~-----~~~~g~~~~i~~~~~~~~~--~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~- 138 (459)
T 4fce_A 74 ---LNWVL--Q-----AEQLGTGHAMQQAAPHFAD--DEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKLDN- 138 (459)
T ss_dssp ----CEEE--C-----SSCCCHHHHHHHHGGGSCT--TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSC-
T ss_pred ---cEEEe--C-----CCCCCcHHHHHHHHHhcCC--CCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEecCC-
Confidence 22322 1 1248999999999887752 47999999999 445679999998865 566777766543
Q ss_pred cCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhC---CCCCC
Q 009971 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKF---PGAND 322 (521)
Q Consensus 246 ~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~---~~~~d 322 (521)
+..|+.+..| ++++..+.|||...... ...+++++|+|+|+++.|.++++... .....
T Consensus 139 -~~~~g~v~~~-~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~ 199 (459)
T 4fce_A 139 -PSGYGRIVRE-NGDVVGIVEHKDASDAQ-----------------REINEINTGILVANGRDLKRWLSLLDNNNAQGEF 199 (459)
T ss_dssp -CTTSCEEEEE-TTEEEEEECGGGCCTTG-----------------GGCCEEEEEEEEEEHHHHHHHHHTCCCCSTTCSC
T ss_pred -CCcccEEEeC-CCcEEEEEECCCCChHH-----------------hhccEEEEEEEEEEHHHHHHHHHHhCccccCCcE
Confidence 5678888887 79999999886432110 12469999999999998866766422 12233
Q ss_pred hhhcchHhhhhCCceEEEEEecceE--EecCCHHHHHHHhhhcccCC------------CCCccccccCCCcccCCCCcC
Q 009971 323 FGSEVIPGATSIGMRVQAYLYDGYW--EDIGTIEAFYNANLGITKKP------------IPDFRYFYDRSAPIYTQPRYL 388 (521)
Q Consensus 323 ~~~dil~~li~~~~~I~~~~~~g~w--~dIgt~edy~~An~~ll~~~------------~~~~~~~~~~~~~i~~~~~~~ 388 (521)
+.+++++.+++.+.+++++..+++| ++|+|++||..|+..+..+. .|... ++++.+.+..++.+.
T Consensus 200 ~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~-~~~~~~~ig~~~~i~ 278 (459)
T 4fce_A 200 YITDIIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRF-DLRGELTHGRDITID 278 (459)
T ss_dssp CTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGE-EEEEEEEECSSCEEC
T ss_pred EHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeE-EEeCcEEECCCcEEC
Confidence 4688999998888999999999765 67999999999986554221 12212 344555566666666
Q ss_pred CCceee-------------cccccceEECCCcEEce-eEEeeeEECCCCEECCCCEEcc-eEEECCcccccccc-ccccc
Q 009971 389 PPSKML-------------DADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIED-TLLMGADYYETDAD-RRFLA 452 (521)
Q Consensus 389 ~~~~i~-------------~~~i~~~~Ig~~~~I~~-~~I~~s~ig~~~~Ig~~~~I~~-s~i~~~~~~e~~~~-~~~~~ 452 (521)
|.+.+. ++.+.++.||++|.|+. |.|.+++||++|.||++|+|.. +.+.++..+..... ..+.+
T Consensus 279 ~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~i 358 (459)
T 4fce_A 279 TNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKARL 358 (459)
T ss_dssp TTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEEEEEE
T ss_pred CCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEeeeEE
Confidence 666553 22233445555555554 5445555555555555555542 22222221111111 23344
Q ss_pred cCCCcceeeCCCCEEeeeEECCCCEECCCcEEeCCCccCCc-eeecCCeEEcCCe-----EEECCCCEECCCccC
Q 009971 453 AKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEA-ARETDGYFIKSGI-----VTIIKDALIPSGTII 521 (521)
Q Consensus 453 ~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~~~~~-~~~~~~~~I~~g~-----v~I~~~~~i~~gsvi 521 (521)
++++ .|++.+.+.+++|+++|.||+++++.+.+++.+. ++||++++|+.|. ++||++|+||+||+|
T Consensus 359 ~~~~---~i~~~~~i~~~~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~gv~Ig~~~~igagsvV 430 (459)
T 4fce_A 359 GKGS---KAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTV 430 (459)
T ss_dssp CTTC---EEEEEEEEEEEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEE
T ss_pred cCCC---EECCceEECCeEECCCCEECCCCEEeccccccCCCCEECCCeEEcCCCEEcCCcEECCCCEECCCCEE
Confidence 4444 4555556667899999999999999886665553 5566666666552 778999999999875
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=2.4e-41 Score=360.04 Aligned_cols=383 Identities=19% Similarity=0.210 Sum_probs=265.8
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCc
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (521)
++++.|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|++++..+++.+++.+.
T Consensus 3 ~~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~gk-pli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~--------- 69 (456)
T 2v0h_A 3 KKALSAVILAAGKGTRMYS---DLPKVLHTIAGK-PMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE--------- 69 (456)
T ss_dssp -CCEEEEEECCCCCGGGCS---SSCGGGSEETTE-EHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC---------
T ss_pred CCcceEEEECCCCCcccCC---CCCccccEECCc-cHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC---------
Confidence 3578999999999999984 689999999986 999999999999999999999998878888777641
Q ss_pred CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe--eccccHHHHHHHHHhcCCcEEEEEEecCc
Q 009971 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH--LYRMDYERFIQAHRETDADITVAALPMDE 244 (521)
Q Consensus 167 ~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~--l~~~dl~~ll~~h~~~~aditi~~~~~~~ 244 (521)
+ ++++.. .+..|++++++.++..+++ .++||+++||+ +...++.++++.|.+ ++++++..+.++
T Consensus 70 --~-~~~v~~-------~~~~g~~~~~~~~~~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~ 135 (456)
T 2v0h_A 70 --Q-VNWVLQ-------TEQLGTAHAVQQAAPFFKD--NENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLDN 135 (456)
T ss_dssp --C-CEEEEC-------SCCCCHHHHHHHHGGGCCT--TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSS
T ss_pred --C-cEEEeC-------CCCCCcHHHHHHHHHhcCC--CCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecCC
Confidence 1 233321 1238999999999877742 47999999999 445779999998866 577777766543
Q ss_pred ccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCC---CC
Q 009971 245 KRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG---AN 321 (521)
Q Consensus 245 ~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~---~~ 321 (521)
+..|+.+..| ++++..+.||+...... ...+++++|+|+|+++.|.++++..... ..
T Consensus 136 --~~~~g~v~~~-~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~ 195 (456)
T 2v0h_A 136 --PTGYGRIIRE-NGNVVAIVEQKDANAEQ-----------------LNIKEVNTGVMVSDGASFKKWLARVGNNNAQGE 195 (456)
T ss_dssp --CTTSCEEEEE-TTEEEEEECTTTCCHHH-----------------HTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCC
T ss_pred --CCccceEEEc-CCcEEEEEECCCCChhH-----------------hcCcEEEEEEEEEEHHHHHHHHHHhcccccccc
Confidence 5568888877 78999999986532110 1246899999999999776666543221 22
Q ss_pred ChhhcchHhhhhCCceEEEEEecce--EEecCCHHHHHHHhhhcccCC------------CCCccccccCCCcccCCCCc
Q 009971 322 DFGSEVIPGATSIGMRVQAYLYDGY--WEDIGTIEAFYNANLGITKKP------------IPDFRYFYDRSAPIYTQPRY 387 (521)
Q Consensus 322 d~~~dil~~li~~~~~I~~~~~~g~--w~dIgt~edy~~An~~ll~~~------------~~~~~~~~~~~~~i~~~~~~ 387 (521)
.+.+++++.+++.+.+++++..+++ |++|+|++||.+|+..+..+. .|... ++++...+..++.+
T Consensus 196 ~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~i~~~~~ig~~~~I 274 (456)
T 2v0h_A 196 YYLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARF-DLRGTLEHGKDVEI 274 (456)
T ss_dssp CCGGGHHHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGE-EEEEEEEECSSCEE
T ss_pred EEHHHHHHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCcc-EEcCceEECCCCEE
Confidence 3458899998887889999999765 579999999999987654321 01112 33444455555555
Q ss_pred CCCceeecccccceEECCCcEEce-eEEeeeEECCCCEECCCCEEcceEEECCcccccccc--ccccccCCCc-------
Q 009971 388 LPPSKMLDADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDAD--RRFLAAKGSV------- 457 (521)
Q Consensus 388 ~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~--~~~~~~~~~~------- 457 (521)
.+++.+. .++.||++|.|+. |.|.+++||++|.|+++|.|.++.+..+......+. ..+.||+++.
T Consensus 275 ~~~~~i~----~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i 350 (456)
T 2v0h_A 275 DVNVIIE----GNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEI 350 (456)
T ss_dssp CSSEEEE----EEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEE
T ss_pred cCCcEEc----CCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEE
Confidence 5555542 3567777777776 777777788888777777776655544433221111 1233333320
Q ss_pred -ceeeCCCCEE------eeeEECCCCEECCCcEEeCCCccCC-ceeecCCeEEcCCe-----EEECCCCEECCCccC
Q 009971 458 -PIGIGKNSHI------KRAIIDKNARIGDNVKIVNSDSVQE-AARETDGYFIKSGI-----VTIIKDALIPSGTII 521 (521)
Q Consensus 458 -~~~Ig~~~~i------~~~ii~~~~~Ig~~~~i~~~~~~~~-~~~~~~~~~I~~g~-----v~I~~~~~i~~gsvi 521 (521)
+..|++++.+ .++.||+||.||+++++.+.++... .++||++++|+.+. ++||++++|++||+|
T Consensus 351 ~~~~i~~~~~i~~~~~~~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~s~v 427 (456)
T 2v0h_A 351 KKSTVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTI 427 (456)
T ss_dssp ESCEECTTCEEEEEEEEESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEESEEECTTCEECTTCEE
T ss_pred eccEECCCCEeccceeecCcEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCCcEECCCCEECCCCEE
Confidence 0112333333 2358889999999998887544333 34566666665552 778999999999875
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=1e-34 Score=289.88 Aligned_cols=246 Identities=21% Similarity=0.298 Sum_probs=194.5
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcC
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (521)
|.|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+.+.+.+.- ...
T Consensus 1 M~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~--~l~ 77 (281)
T 3juk_A 1 MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDK-PLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEH--QIQ 77 (281)
T ss_dssp CCCEEEEECCSCCGGGTTGGGTSCGGGCBSSSS-BHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC---------
T ss_pred CceEEEEECCcCCcccCccccCCCcccceECCE-EHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhh--hhh
Confidence 358999999999999999999999999999987 99999999999999999999999999999999876432110 000
Q ss_pred -C-------------CcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeecccc-----HHHHHHHH
Q 009971 168 -E-------------GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMD-----YERFIQAH 228 (521)
Q Consensus 168 -~-------------~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~d-----l~~ll~~h 228 (521)
. ..+.+....+ .+..||+++++.++.+++ .++|++++||++++.+ +.++++.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~Gt~~al~~a~~~l~---~~~~lv~~~D~~~~~~~~~~~l~~l~~~~ 149 (281)
T 3juk_A 78 GTNKENALKSIRNIIEKCCFSYVRQ-----KQMKGLGHAILTGEALIG---NEPFAVILADDLCISHDHPSVLKQMTSLY 149 (281)
T ss_dssp -CCHHHHHHHHHHHHHHCEEEEEEC-----SSCCCHHHHHHHTHHHHC---SSCEEEECTTEEEECTTSCCHHHHHHHHH
T ss_pred cccchhhhhhhhccccCccEEEEec-----CCCCCcHHHHHHHHHHcC---CCCEEEEeCCeeccCccchHHHHHHHHHH
Confidence 0 0012211122 234899999999998885 3789999999999888 99999999
Q ss_pred HhcCCcEEEEEEecCcccCcceeEEEeCC--CC--CeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEE
Q 009971 229 RETDADITVAALPMDEKRATAFGLMKIDE--EG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVI 304 (521)
Q Consensus 229 ~~~~aditi~~~~~~~~~~~~~g~v~~d~--~g--rV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyif 304 (521)
.++++ .++++...+.+++..||++..|+ +| +|..|.|||..... .++++++|+|+|
T Consensus 150 ~~~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~~-------------------~~~~~~~GiYi~ 209 (281)
T 3juk_A 150 QKYQC-SIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDA-------------------PSNLAVIGRYIL 209 (281)
T ss_dssp HHHCS-CEEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTTC-------------------SCSEEEEEEEEE
T ss_pred HHcCC-CEEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCCC-------------------CcceeEEEEEEE
Confidence 98887 67777776555678999999986 77 99999999974321 146899999999
Q ss_pred eHHHHHHHHhhhCCC--CCChhhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhcccC
Q 009971 305 SKDVMLNLLRDKFPG--ANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKK 366 (521)
Q Consensus 305 s~~vl~~ll~~~~~~--~~d~~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~~ 366 (521)
++++|. .+....+. ......++++.+++.+ ++++|.++++|.|||||++|++|++.++..
T Consensus 210 ~~~~l~-~l~~~~~~~~~e~~l~d~i~~l~~~~-~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~ 271 (281)
T 3juk_A 210 TPDIFE-ILSETKPGKNNEIQITDALRTQAKRK-RIIAYQFKGKRYDCGSVEGYIEASNAYYKK 271 (281)
T ss_dssp CTTHHH-HHHTCCCCGGGSCCHHHHHHHHHHHS-CCEEEECCSEEEETTSHHHHHHHHHHHHHH
T ss_pred CHHHHH-HHHhcCCCCCCceeHHHHHHHHHhcC-CEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 999986 55532221 1122488999998855 999999999999999999999999988754
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=1.2e-32 Score=273.24 Aligned_cols=237 Identities=24% Similarity=0.366 Sum_probs=192.4
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCC-hHHHHHHHHHhhhccCCCC
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFN-SASLNRHLSRAYASNMGGY 165 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~-~~~i~~~l~~~~~~~~~~~ 165 (521)
.+.|+|||||||.|+||+|+|..+||+|+||+|+ |||+|++++|.++|+++|+|++++. .+++.+++.....+++
T Consensus 22 ~~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~-pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~~~~~~~--- 97 (269)
T 4ecm_A 22 SNAMKGIILAGGTGSRLYPITKVTNKHLLPVGRY-PMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGSGQEFGV--- 97 (269)
T ss_dssp --CEEEEEECCSCCGGGTTTTSSSCGGGSEETTE-EHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGTC---
T ss_pred ccCcEEEEECCCCccccccccCCCCceecEECCE-EHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhhccccCc---
Confidence 3569999999999999999999999999999876 9999999999999999999999975 4778888876433321
Q ss_pred cCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeeccccHHHHHHHHHhcCCcEEEEEEecCcc
Q 009971 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEK 245 (521)
Q Consensus 166 ~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~dl~~ll~~h~~~~aditi~~~~~~~~ 245 (521)
.+.+. .+ .+..|++++++.++..++ .++|++++||++++.++.++++.|.++++++++++.+.++
T Consensus 98 ----~i~~~--~~-----~~~~G~~~al~~a~~~~~---~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~- 162 (269)
T 4ecm_A 98 ----SFTYR--VQ-----DKAGGIAQALGLCEDFVG---NDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVDD- 162 (269)
T ss_dssp ----EEEEE--EC-----SSCCCHHHHHHTTHHHHT---TSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEECSC-
T ss_pred ----eEEEe--eC-----CccCcHHHHHHHHHHhcC---CCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEECCC-
Confidence 12222 11 124899999999988875 4799999999999988999999999989999998887653
Q ss_pred cCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCC-CCCCh-
Q 009971 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP-GANDF- 323 (521)
Q Consensus 246 ~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~-~~~d~- 323 (521)
+..||++..| +|+|+.|.|||..+. ++++++|+|+|++++|. .+....+ ...++
T Consensus 163 -~~~~g~v~~d-~g~v~~~~ekp~~~~---------------------~~~~~~Giy~~~~~~l~-~l~~~~~~~~ge~~ 218 (269)
T 4ecm_A 163 -PERFGVANIQ-NRKIIEIEEKPKEPK---------------------SSYAVTGIYLYDSKVFS-YIKELKPSARGELE 218 (269)
T ss_dssp -GGGSEEEEEE-TTEEEEEEESCSSCS---------------------CSEEEEEEEEECTTHHH-HHTSCCBCTTSCBC
T ss_pred -CCCceEEEEc-CCEEEEEEECCCCCC---------------------CcEEEEEEEEECHHHHH-hhhhcCCCCCCeee
Confidence 5689999887 499999999985321 46999999999999885 4543222 12333
Q ss_pred hhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhcccCC
Q 009971 324 GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKP 367 (521)
Q Consensus 324 ~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~~~ 367 (521)
..++++.+++.+ ++.++.++++|.||||+++|.+|++.+++..
T Consensus 219 l~d~l~~l~~~g-~v~~~~~~~~~~dIgt~~dl~~a~~~l~~~~ 261 (269)
T 4ecm_A 219 ITDINNWYLKRG-VLTYNEMSGWWTDAGTHVSLQRANALARDIN 261 (269)
T ss_dssp HHHHHHHHHHTT-CEEEEECCSCEEECSSHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHcC-CEEEEEeCCEEEeCCCHHHHHHHHHHHHhcc
Confidence 488999998855 8999999999999999999999999887654
No 10
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=1.3e-31 Score=270.09 Aligned_cols=245 Identities=23% Similarity=0.305 Sum_probs=187.8
Q ss_pred CCccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhcc----
Q 009971 86 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASN---- 161 (521)
Q Consensus 86 ~~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~---- 161 (521)
+++.|+|||||||.||||+|+|+.+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+...+...
T Consensus 5 ~~~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~ 83 (302)
T 2e3d_A 5 NTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDK-PLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLE 83 (302)
T ss_dssp CCSCCEEEEECCSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHHHHHC
T ss_pred hhcccEEEEECCcCcccCCccccCCCceeeEECCe-EHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhhhhhhh
Confidence 34568999999999999999999999999999986 9999999999999999999999998899999987532100
Q ss_pred -CCCC----------cCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeecc-----c---cHH
Q 009971 162 -MGGY----------KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYR-----M---DYE 222 (521)
Q Consensus 162 -~~~~----------~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~-----~---dl~ 222 (521)
.+.. .....+.++. + .+..||+++++.++..++ .++|++++||++++ . ++.
T Consensus 84 ~~~~~~~l~~~~~~~~~~~~i~~~~--~-----~~~~Gt~~al~~a~~~~~---~~~~lv~~~D~~~~~~~~~~~~~~l~ 153 (302)
T 2e3d_A 84 KRVKRQLLDEVQSICPPHVTIMQVR--Q-----GLAKGLGHAVLCAHPVVG---DEPVAVILPDVILDEYESDLSQDNLA 153 (302)
T ss_dssp ----CHHHHHHHHTSCTTCEEEEEE--C-----SSCCCHHHHHHHTHHHHC---SSCEEEECTTEEECTTSSCTTTSTHH
T ss_pred hccchhhhhhhhhccccCcceEEee--C-----CccCCHHHHHHHHHHHcC---CCcEEEEcCCccccCccccchHHHHH
Confidence 0000 0001122221 1 234899999999998875 36899999999876 2 799
Q ss_pred HHHHHHHhcCCcEEEEEEecCcccCcceeEEEeC----CCC---CeEEeeeCCChhhhhhcccccccccCCchhhccCCc
Q 009971 223 RFIQAHRETDADITVAALPMDEKRATAFGLMKID----EEG---RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPY 295 (521)
Q Consensus 223 ~ll~~h~~~~aditi~~~~~~~~~~~~~g~v~~d----~~g---rV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (521)
++++.|++.++ +++++.+.+ ++..||++..+ ++| +|..|.|||..... .++
T Consensus 154 ~l~~~~~~~~~-~~i~~~~~~--~~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~-------------------~~~ 211 (302)
T 2e3d_A 154 EMIRRFDETGH-SQIMVEPVA--DVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVA-------------------PSN 211 (302)
T ss_dssp HHHHHHHHHCC-EEEEEEECS--CGGGSEEEECTTCCCCTTCEEEECEEEESCCTTTC-------------------SCS
T ss_pred HHHHHHHhcCC-cEEEEEEcc--CCCCccEEEecccccCCCCceeEEEEEECCCCCcc-------------------ccc
Confidence 99999988777 677776653 46789998874 456 89999999864221 146
Q ss_pred eeeEEEEEEeHHHHHHHHhhhCCC--CCChhhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhccc
Q 009971 296 IASMGIYVISKDVMLNLLRDKFPG--ANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITK 365 (521)
Q Consensus 296 l~~~GIyifs~~vl~~ll~~~~~~--~~d~~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~ 365 (521)
++++|+|+|++++|. .++...+. ...+..++++.+++.+ +++++.++++|.||||+++|++|++.++.
T Consensus 212 ~~~~Giyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~-~v~~~~~~~~~~DIgt~~d~~~a~~~~~~ 281 (302)
T 2e3d_A 212 LAIVGRYVLSADIWP-LLAKTPPGAGDEIQLTDAIDMLIEKE-TVEAYHMKGKSHDCGNKLGYMQAFVEYGI 281 (302)
T ss_dssp EEEEEEEEECTTHHH-HHTCCCC----CCCHHHHHHHHHHHS-CEEEEECCSCEEECSSHHHHHHHHHHHHH
T ss_pred eEEEEEEEECHHHHH-HHHhhCCCCCCceehHHHHHHHHHhC-CEEEEEeCCeEEcCCCHHHHHHHHHHHHh
Confidence 999999999999885 55433331 1223478888888755 99999999999999999999999976653
No 11
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.98 E-value=9e-32 Score=264.76 Aligned_cols=247 Identities=21% Similarity=0.302 Sum_probs=181.1
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhc--cCCCC
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYAS--NMGGY 165 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~--~~~~~ 165 (521)
|+|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+.+...+ ++...
T Consensus 1 m~~~avIlAaG~gtRl~~lt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~ 79 (259)
T 1tzf_A 1 MASKAVILAGGLGTRLSEETIVKPKPMVEIGGK-PILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFH 79 (259)
T ss_dssp CCCEEEEEECSCC--------CCCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEE
T ss_pred CCcEEEEECCCCcccCCCccCCCCccccEECCE-EHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhccccccccccc
Confidence 358999999999999999999999999999986 999999999999999999999999989999999764210 11000
Q ss_pred cCCCcEEEeecccCC-----CCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeeccccHHHHHHHHHhcCCcEEEEEE
Q 009971 166 KNEGFVEVLAAQQSP-----ENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAAL 240 (521)
Q Consensus 166 ~~~~~v~vl~~~q~~-----~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~dl~~ll~~h~~~~aditi~~~ 240 (521)
.+.+.++++.....+ .+.....||+++++.++.+++. .++|++++||++++.++.++++.|.++++++|+...
T Consensus 80 ~~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~--~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~~ 157 (259)
T 1tzf_A 80 MAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKD--DEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTAT 157 (259)
T ss_dssp GGGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTT--SSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEEE
T ss_pred ccccceeeeeccccccceeeeecccccCcHHHHHHHHHhcCC--CCcEEEEECCEecccCHHHHHHHHHHhCCeEEEEEe
Confidence 000012222110000 0001148999999999887742 478999999999888999999999888888877543
Q ss_pred ecCcccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCC
Q 009971 241 PMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGA 320 (521)
Q Consensus 241 ~~~~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~ 320 (521)
+ ++..|+++.+| +|+|..|.|||... .+++++|+|+|++++|. .+.. ..
T Consensus 158 ~----~~~~~g~v~~~-~g~v~~~~ekp~~~----------------------~~~~~~Giy~~~~~~l~-~l~~---~~ 206 (259)
T 1tzf_A 158 F----PPGRFGALDIQ-AGQVRSFQEKPKGD----------------------GAMINGGFFVLNPSVID-LIDN---DA 206 (259)
T ss_dssp C----CCCCSEEEEEE-TTEEEEEEESCSCC----------------------SCCEECCCEEECGGGGG-GCCS---TT
T ss_pred c----CCCCccEEEEc-CCEEEEEEecCCCC----------------------CceEEEEEEEeCHHHHH-hhcc---cc
Confidence 2 35679988888 79999999988532 25899999999998874 3321 22
Q ss_pred CChhhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhcccCCCC
Q 009971 321 NDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIP 369 (521)
Q Consensus 321 ~d~~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~~~~~ 369 (521)
.++..++++.+++.+ +++++.++++|.||||++||.+++..+.....|
T Consensus 207 ~~~~~~~i~~~~~~~-~v~~~~~~~~~~dI~t~~d~~~a~~~~~~~~~p 254 (259)
T 1tzf_A 207 TTWEQEPLMTLAQQG-ELMAFEHPGFWQPMDTLRDKVYLEGLWEKGKAP 254 (259)
T ss_dssp CCTTTHHHHHHHHTT-CEEEEEECSCEEECCSHHHHHHHHHHHHTTCCT
T ss_pred cccHHHHHHHHHHcC-CEEEEEeCcEEEeCCCHHHHHHHHHHHhcCCCC
Confidence 346678898888744 899999999999999999999999988765544
No 12
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.98 E-value=1.3e-31 Score=269.45 Aligned_cols=246 Identities=19% Similarity=0.272 Sum_probs=170.8
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhcc-----C
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASN-----M 162 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~-----~ 162 (521)
+.|+|||||||.|+||+|+|+.+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+|+.+.+... .
T Consensus 13 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~ 91 (297)
T 2ux8_A 13 PLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDR-PLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAAR 91 (297)
T ss_dssp CCCEEEEEECCCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHTT
T ss_pred CccEEEEECCCCccccCccccCCCceeeeECCe-EHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhhc
Confidence 468999999999999999999999999999986 9999999999999999999999998899999986532100 0
Q ss_pred CC----C---c-CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeecc---ccHHHHHHHHHhc
Q 009971 163 GG----Y---K-NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYR---MDYERFIQAHRET 231 (521)
Q Consensus 163 ~~----~---~-~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~---~dl~~ll~~h~~~ 231 (521)
+. . . ....+.++. + .+..||+++++.++..++ .++|++++||++++ .++.++++.|++.
T Consensus 92 ~~~~~~~~~~~~~g~~i~~~~--~-----~~~~Gt~~al~~a~~~~~---~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~ 161 (297)
T 2ux8_A 92 GKSLDVLDGTRLKPGNIAYVR--Q-----QEPMGLGHAVWCARDIVG---DEPFAVLLPDDFMFGQPGCLKQMVDAYNKV 161 (297)
T ss_dssp TCCGGGGTTSCCSTTSEEEEE--C-----CSCCCHHHHHHTTHHHHC---SSCEEEECTTEEEESSSCHHHHHHHHHHHH
T ss_pred cchhhhhhhcccCCCceEEEe--C-----CCCCChHHHHHHHHHHcC---CCcEEEEeCCeecCCChHHHHHHHHHHHhc
Confidence 00 0 0 001133332 1 124899999999988775 37899999999877 5699999999887
Q ss_pred CCcEEEEEEecCcccCcceeEEEeCC--CC--CeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHH
Q 009971 232 DADITVAALPMDEKRATAFGLMKIDE--EG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKD 307 (521)
Q Consensus 232 ~aditi~~~~~~~~~~~~~g~v~~d~--~g--rV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~ 307 (521)
++ .++++.+.+..++..||++..|+ ++ +|..|.|||..... .++++++|+|+|+++
T Consensus 162 ~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~~-------------------~~~~~~~Giyi~~~~ 221 (297)
T 2ux8_A 162 GG-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTA-------------------PSNLSVIGRYILQPE 221 (297)
T ss_dssp CS-EEEEEC-----------CCCCCCBCSSEEEC---------------------------------CCCEEEEEEECTH
T ss_pred CC-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCCC-------------------CccEEEEEEEEECHH
Confidence 76 56666655434566798887663 45 89999999853221 136899999999999
Q ss_pred HHHHHHhhhCCC-CCCh-hhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhcccC
Q 009971 308 VMLNLLRDKFPG-ANDF-GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKK 366 (521)
Q Consensus 308 vl~~ll~~~~~~-~~d~-~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~~ 366 (521)
+|. .++...+. ..++ ..++++.+++. .+++++.++++|.||||+++|.+|++.++..
T Consensus 222 ~l~-~l~~~~~~~~~~~~l~d~i~~l~~~-~~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~ 280 (297)
T 2ux8_A 222 VMR-ILENQGKGAGGEIQLTDAMQRMIGD-QPFHGVTFQGTRYDCGDKAGFIQANLAVALS 280 (297)
T ss_dssp HHH-HHHHTC--------CCTTGGGGTTT-SCEEEEECSSEEEETTSHHHHHHHHHHHHHH
T ss_pred HHH-HHHhhCCCCCCeeEHHHHHHHHHhc-CCEEEEEecceEEeCCCHHHHHHHHHHHHhc
Confidence 886 44433322 1122 47888888874 4999999999999999999999999877644
No 13
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.97 E-value=6.6e-31 Score=267.58 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=189.0
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhcc--C---
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASN--M--- 162 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~--~--- 162 (521)
+.|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+|+...+.|. +
T Consensus 11 ~~~~aVIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~ 89 (323)
T 2pa4_A 11 AVKTVVVPAAGLGTRFLPATKTVPKELLPVVDT-PGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMER 89 (323)
T ss_dssp -CCEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHT
T ss_pred cceEEEEECCCCccccCccccCCCceeeeECCE-EHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhcc
Confidence 358999999999999999999999999999986 9999999999999999999999998889998876432210 0
Q ss_pred CC--------Cc-CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeecc--ccHHHHHHHHHhc
Q 009971 163 GG--------YK-NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYR--MDYERFIQAHRET 231 (521)
Q Consensus 163 ~~--------~~-~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~--~dl~~ll~~h~~~ 231 (521)
+. .+ ....+.++. + .+..||+++++.++..+.+ ..+.|++++||++++ .++.++++.|.+.
T Consensus 90 ~~~~~~~~~~~~~~g~~i~~~~--~-----~~~~Gt~~al~~a~~~l~~-~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~ 161 (323)
T 2pa4_A 90 GKTDQVEIIRRAADLIKAVPVT--Q-----DKPLGLGHAVGLAESVLDD-DEDVVAVMLPDDLVLPTGVMERMAQVRAEF 161 (323)
T ss_dssp TCHHHHHHTTHHHHHCEEEEEE--C-----SSCCCHHHHHHTTGGGSCS-SCCEEEEECTTEEEESSCHHHHHHHHHHTT
T ss_pred chhhhhhhhhccccCcceEEEe--C-----CccCCcHHHHHHHHHHhcC-CCCeEEEEeCCcccCchHHHHHHHHHHHhc
Confidence 00 00 001122221 1 1248999999999877752 123399999999776 5699999999877
Q ss_pred CCcEEEEEEecCcccCcceeEEEeC----CCC--CeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEe
Q 009971 232 DADITVAALPMDEKRATAFGLMKID----EEG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVIS 305 (521)
Q Consensus 232 ~aditi~~~~~~~~~~~~~g~v~~d----~~g--rV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs 305 (521)
++ .++++.+.+.+++..||++..| +++ +|..|.|||..... .+++.++|+|+|+
T Consensus 162 ~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~~~-------------------~~~~~~~GiY~~~ 221 (323)
T 2pa4_A 162 GG-SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIEDA-------------------PSRLAATGRYLLD 221 (323)
T ss_dssp CS-EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTTTC-------------------SCSEEEEEEEEEE
T ss_pred CC-cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCCccc-------------------cccEEEEEEEEEC
Confidence 65 5666666654456789998876 454 99999999854221 1468999999999
Q ss_pred HHHHHHHHhhhCCCC-CCh-hhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhcccCC
Q 009971 306 KDVMLNLLRDKFPGA-NDF-GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKP 367 (521)
Q Consensus 306 ~~vl~~ll~~~~~~~-~d~-~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~~~ 367 (521)
+++|. .+....+.. ..+ ..++++.+++.+.+++++.++++|.||||++||.+|++.++...
T Consensus 222 ~~~~~-~l~~~~~~~~ge~~l~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~~~~ 284 (323)
T 2pa4_A 222 RKIFD-ALRRITPGAGGELQLTDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFGLSH 284 (323)
T ss_dssp THHHH-HHHHCCCCGGGCCCHHHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHHHTC
T ss_pred HHHHH-HHHhhCCCCCCeEeHHHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHhhcC
Confidence 99886 444333221 122 37899999886789999999999999999999999998776543
No 14
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.97 E-value=6.2e-31 Score=265.39 Aligned_cols=258 Identities=14% Similarity=0.175 Sum_probs=189.0
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceec--CCCcchhHHHHHHhHhCCCceEEEEecCCh-HHHHHHHHHhhhccCC
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPL--GANYRLIDIPVSNCLNSNISKIYVLTQFNS-ASLNRHLSRAYASNMG 163 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI--~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~ 163 (521)
||+|+|||||||.|+||+| ||+|+|| +|+ |||+|+++++.++|+++|+|++++.. +.+.+|+.+.+.++..
T Consensus 3 ~m~~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~-pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~ 76 (303)
T 3pnn_A 3 AMKPTLFVLAAGMGSRYGS-----LKQLDGIGPGGD-TIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKYEGRIP 76 (303)
T ss_dssp CCCCEEEEECTTCBCTTSS-----BCCCCCCSTTSC-CHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHHTTTSC
T ss_pred CCceEEEEECCCCcccCCC-----CceEeEcCCCCe-eHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHhccCCc
Confidence 5678999999999999997 6999999 476 99999999999999999999999985 8999999876554321
Q ss_pred CCcCCCcEEEeeccc--------CCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeecccc-HHHHHHHHHh---c
Q 009971 164 GYKNEGFVEVLAAQQ--------SPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRE---T 231 (521)
Q Consensus 164 ~~~~~~~v~vl~~~q--------~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~---~ 231 (521)
+.++.... ......+++||++++++++.+++ ++|||++||++++.+ +.++++.|.+ +
T Consensus 77 -------i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~----~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~ 145 (303)
T 3pnn_A 77 -------VELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIR----EPFAVINADDFYGRNGFEVLARKLMTLEGK 145 (303)
T ss_dssp -------EEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCC----SCEEEEESSCBCCHHHHHHHHHHHHTTTTC
T ss_pred -------EEEEecccccccccccccccccccCCcHHHHHHHHHhcC----CCEEEEECCeecCHHHHHHHHHHHHHhccc
Confidence 22221110 00001135899999999987773 689999999999876 9999999976 5
Q ss_pred CCcEEEEEEecCcccCcce-----eEEEeCCCCCeEEeeeCCChhhhhh-cccccccccCCchhhccCCceeeEEEEEEe
Q 009971 232 DADITVAALPMDEKRATAF-----GLMKIDEEGRIIEFSEKPKGEQLKA-MKVDTTILGLDDERAKEMPYIASMGIYVIS 305 (521)
Q Consensus 232 ~aditi~~~~~~~~~~~~~-----g~v~~d~~grV~~i~ekp~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~GIyifs 305 (521)
++++++++.+.++. ...| |++.+|++|+|+.|.|||+...... ..+... .........++++++|+|+|+
T Consensus 146 ~~~~~v~~~~~~~~-~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~~~~~~~---~g~~~~~~~~~~i~~GiY~f~ 221 (303)
T 3pnn_A 146 QGEYCMVGYRVGNT-LSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGTISFRDE---TGKICTLAEDAPVSMNMWGFT 221 (303)
T ss_dssp SSEEEEEEEEGGGS-CBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTEEEEECT---TSCEEEECTTCEEEEEEEEEC
T ss_pred cCceEEEEEECCCc-cCccCceeeeeEeeCCCCcEEEEEECCCCcccccccccccc---ccccccCCCCCEEEEEEEEEC
Confidence 68889988876532 1344 7888998899999999986421000 000000 000000012469999999999
Q ss_pred HHHHHHHHh--------hhC-CCCCChhhcchHhhhhCCc-eEEEEEecceEEecCCHHHHHHHhhhccc
Q 009971 306 KDVMLNLLR--------DKF-PGANDFGSEVIPGATSIGM-RVQAYLYDGYWEDIGTIEAFYNANLGITK 365 (521)
Q Consensus 306 ~~vl~~ll~--------~~~-~~~~d~~~dil~~li~~~~-~I~~~~~~g~w~dIgt~edy~~An~~ll~ 365 (521)
+++|..+.+ ... .....+..++++.+++.+. ++++|.++++|+||||+++|.+|+..+..
T Consensus 222 ~~~~~~l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~ 291 (303)
T 3pnn_A 222 PDYFDYSEELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRE 291 (303)
T ss_dssp THHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHH
Confidence 999874432 111 1223346899999988776 99999999999999999999999987654
No 15
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.97 E-value=1.2e-30 Score=256.91 Aligned_cols=226 Identities=11% Similarity=0.087 Sum_probs=173.0
Q ss_pred EEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHh-CCCceEEEEecCChHHHHHHHHHhhh-ccCCCCcCCC
Q 009971 92 GIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLN-SNISKIYVLTQFNSASLNRHLSRAYA-SNMGGYKNEG 169 (521)
Q Consensus 92 aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~-~gi~~I~Iv~~~~~~~i~~~l~~~~~-~~~~~~~~~~ 169 (521)
+||||||.||||+|+|..+||||+||+|+ |||+|+|++|.+ +|+++|+|++++..+ +.+++.+... ++. .
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gk-pli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~~~~~------~ 73 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQ-TLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKATQLGI------K 73 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTE-EHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHHHHTC------S
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCe-EHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHHHcCC------C
Confidence 79999999999999999999999999987 999999999999 799999999998866 6666655321 111 1
Q ss_pred cEEEeecccCCCCCCCCCChHHHHHHHHHHhhh---cCcceEEEEeCCeec-cccHHHHHHHHHhcCCcEEEEEEecCcc
Q 009971 170 FVEVLAAQQSPENPNWFQGTADAVRQYLWLFEE---HNVLEFLVLAGDHLY-RMDYERFIQAHRETDADITVAALPMDEK 245 (521)
Q Consensus 170 ~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~---~~~~~~Lvl~gD~l~-~~dl~~ll~~h~~~~aditi~~~~~~~~ 245 (521)
.+.++.. + .+..||++++++++..+.. ..+++|+|++||+++ +.++.++ .++++.++++.+.+.
T Consensus 74 ~~~~~~~-~-----~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~~- 141 (255)
T 4evw_A 74 QFYIAEL-H-----TETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGGG- 141 (255)
T ss_dssp SEEEEEE-S-----SCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECCS-
T ss_pred CceEEEe-C-----CCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecCC-
Confidence 1112111 1 1248999999999998831 124789999999988 4556543 256778888887653
Q ss_pred cCcceeEEEeCCCC--CeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHH-HHHHH----HhhhCC
Q 009971 246 RATAFGLMKIDEEG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKD-VMLNL----LRDKFP 318 (521)
Q Consensus 246 ~~~~~g~v~~d~~g--rV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~-vl~~l----l~~~~~ 318 (521)
+ .||++..|++| +|+.|.||+.. ++++++|+|+|++. .|.+. ++...+
T Consensus 142 -p-~yG~v~~d~~g~~~V~~i~EK~~~-----------------------s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~ 196 (255)
T 4evw_A 142 -D-NWSFAKPEHAGSTKVIQTAEKNPI-----------------------SDLCSTGLYHFNRKEDYLEAYREYVARPSQ 196 (255)
T ss_dssp -S-CSCEEEESSTTCCBEEEEESSSCS-----------------------SSEEEEEEEEESCHHHHHHHHHHHHTSCGG
T ss_pred -C-ceeEEEECCCCCeEEEEEEeccCc-----------------------cCcEEEeEEEECcHHHHHHHHHHHHhcccc
Confidence 3 89999999888 99999999432 35999999999975 33322 322211
Q ss_pred ---CCCChhhcchHhhhhCCceEEEEEec-ceEEecCCHHHHHHHhhh
Q 009971 319 ---GANDFGSEVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLG 362 (521)
Q Consensus 319 ---~~~d~~~dil~~li~~~~~I~~~~~~-g~w~dIgt~edy~~An~~ 362 (521)
....+.+++++.+++.+.++.++.++ ++|+||||+++|.++...
T Consensus 197 ~~~~gE~~ltd~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~~ 244 (255)
T 4evw_A 197 EWERGELYIAPLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLRQ 244 (255)
T ss_dssp GCSCSCCCSTTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHHC
T ss_pred cccCCeEehHHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHhc
Confidence 23345689999999888999999996 899999999999998754
No 16
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.97 E-value=1.1e-29 Score=255.03 Aligned_cols=234 Identities=24% Similarity=0.352 Sum_probs=183.0
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEec-CChHHHHHHHHHhhhccCCCCc
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQ-FNSASLNRHLSRAYASNMGGYK 166 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~-~~~~~i~~~l~~~~~~~~~~~~ 166 (521)
|+|+|||||||.||||+|+|..+||+|+||+|+ |||+|++++|..+|+++|+|++. ++.+.+.+++.++..|++
T Consensus 1 M~~~aIILAgG~gtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g~~~g~---- 75 (293)
T 1fxo_A 1 MKRKGIILAGGSGTRLHPATLAISKQLLPVYDK-PMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDGSNWGL---- 75 (293)
T ss_dssp -CEEEEEECCCCCTTTTTHHHHSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGTC----
T ss_pred CCceEEEECCCCCCcCccccCCCCceeCeECCE-eHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhcccccCc----
Confidence 358999999999999999999999999999986 99999999999999999998874 566888899887543321
Q ss_pred CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCee-ccccHHHHHHHHHhcCCcEEEEEEecCcc
Q 009971 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHL-YRMDYERFIQAHRETDADITVAALPMDEK 245 (521)
Q Consensus 167 ~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l-~~~dl~~ll~~h~~~~aditi~~~~~~~~ 245 (521)
.+.+. .+. .+.|+++++..++.++. .++++++.||++ ++.++.++++.|.+.+.+.++++.+..+
T Consensus 76 ---~i~~~--~~~-----~~~G~~~al~~a~~~i~---~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~d- 141 (293)
T 1fxo_A 76 ---DLQYA--VQP-----SPDGLAQAFLIGESFIG---NDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVLD- 141 (293)
T ss_dssp ---EEEEE--ECS-----SCCCGGGHHHHTHHHHT---TSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEECSC-
T ss_pred ---eEEEe--eCC-----CCCCHHHHHHHHHHHhC---CCCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEECCC-
Confidence 12222 121 13799999999988875 368888899994 4678999999998777778887776553
Q ss_pred cCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCC-CCCCh-
Q 009971 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP-GANDF- 323 (521)
Q Consensus 246 ~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~-~~~d~- 323 (521)
+..||++..|++|+|+.|.|||..+. ++++++|+|+|+++++.. +....+ ...++
T Consensus 142 -p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~~-~~~~~~~~~ge~~ 198 (293)
T 1fxo_A 142 -PERYGVVEFDQGGKAISLEEKPLEPK---------------------SNYAVTGLYFYDQQVVDI-ARDLKPSPRGELE 198 (293)
T ss_dssp -GGGSEEEEECTTSCEEEEEESCSSCS---------------------SSEEEEEEEEECTTHHHH-HHHCCCCTTSSCC
T ss_pred -cccCcEEEECCCCcEEEEEECCCCCC---------------------CCeEEEEEEEEcHHHHHH-HHhcCcccCCcee
Confidence 56799999998999999999985332 358999999999999864 433222 12223
Q ss_pred hhcchHhhhhCCceEEEEEec-ce-EEecCCHHHHHHHhhhcc
Q 009971 324 GSEVIPGATSIGMRVQAYLYD-GY-WEDIGTIEAFYNANLGIT 364 (521)
Q Consensus 324 ~~dil~~li~~~~~I~~~~~~-g~-w~dIgt~edy~~An~~ll 364 (521)
.+++++.+++.+ ++.++... ++ |.||||++||.+|+..+.
T Consensus 199 ~td~~~~~l~~g-~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 199 ITDVNRAYLERG-QLSVEIMGRGYAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp HHHHHHHHHHTT-CEEEEECCTTSEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-CeEEEEeCCCCEEEcCCCHHHHHHHHHHHH
Confidence 378888888744 67777775 74 999999999999987664
No 17
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.97 E-value=2.6e-29 Score=252.44 Aligned_cols=233 Identities=22% Similarity=0.352 Sum_probs=182.1
Q ss_pred cEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEec-CChHHHHHHHHHhhhccCCCCcC
Q 009971 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQ-FNSASLNRHLSRAYASNMGGYKN 167 (521)
Q Consensus 89 ~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~-~~~~~i~~~l~~~~~~~~~~~~~ 167 (521)
+|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++.|..+|+++|+|+++ ++.+.+.+++.+...+++
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~g~~~g~----- 76 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPIYDK-PMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGDGSQFGV----- 76 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGTS-----
T ss_pred ceEEEEECCCCCCccccccCCCCceecEECCe-eHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhhccccCc-----
Confidence 37999999999999999999999999999986 99999999999999999999886 667888899887443321
Q ss_pred CCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCee-ccccHHHHHHHHHhcCCcEEEEEEecCccc
Q 009971 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHL-YRMDYERFIQAHRETDADITVAALPMDEKR 246 (521)
Q Consensus 168 ~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l-~~~dl~~ll~~h~~~~aditi~~~~~~~~~ 246 (521)
.+.++. +. ++.|+++++..++.++. .++++++.||++ ++.++.++++.|.+.+.+.++++.+..+
T Consensus 77 --~i~~~~--~~-----~~~G~~~al~~a~~~i~---~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~d-- 142 (295)
T 1lvw_A 77 --RFSYRV--QE-----EPRGIADAFIVGKDFIG---DSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVRD-- 142 (295)
T ss_dssp --EEEEEE--CS-----SCCCGGGHHHHTHHHHT---TSCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEECSC--
T ss_pred --eEEEee--CC-----CCCChHHHHHHHHHHhC---CCcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEECCC--
Confidence 122221 21 13799999999988875 367888889994 4678999999998777778887777654
Q ss_pred CcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCC-CCCCh-h
Q 009971 247 ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP-GANDF-G 324 (521)
Q Consensus 247 ~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~-~~~d~-~ 324 (521)
+..||++..|++|+|+.|.|||..+. ++++++|+|+|+++++.. +....+ ...++ .
T Consensus 143 p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~f~~~~l~~-~~~~~~~~~ge~~~ 200 (295)
T 1lvw_A 143 PRPFGVVEFDSEGRVISIEEKPSRPK---------------------SNYVVPGLYFYDNQVVEI-ARRIEPSDRGELEI 200 (295)
T ss_dssp CTTSEEEEECTTSBEEEEEESCSSCS---------------------CSEECCSEEEECTTHHHH-HHHCCCCTTSCCCH
T ss_pred cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEeEEEcHHHHHH-HHhcCCcccCceeH
Confidence 55799999998999999999985332 358999999999999864 433222 12222 3
Q ss_pred hcchHhhhhCCceEEEEEec-ce-EEecCCHHHHHHHhhhcc
Q 009971 325 SEVIPGATSIGMRVQAYLYD-GY-WEDIGTIEAFYNANLGIT 364 (521)
Q Consensus 325 ~dil~~li~~~~~I~~~~~~-g~-w~dIgt~edy~~An~~ll 364 (521)
+++++.+++. .++.++.+. ++ |.||||++||.+|+..+.
T Consensus 201 td~~~~~l~~-g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (295)
T 1lvw_A 201 TSVNEEYLRM-GKLRVELMGRGMAWLDTGTHDGLLEASSFIE 241 (295)
T ss_dssp HHHHHHHHHT-TCEEEEEECTTCEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCcEEEEeCCCCeEEeCCCHHHHHHHHHHHH
Confidence 7888888874 466777675 64 999999999999998664
No 18
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.97 E-value=1.9e-29 Score=253.55 Aligned_cols=232 Identities=22% Similarity=0.330 Sum_probs=181.7
Q ss_pred EEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEec-CChHHHHHHHHHhhhccCCCCcCC
Q 009971 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQ-FNSASLNRHLSRAYASNMGGYKNE 168 (521)
Q Consensus 90 ~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~-~~~~~i~~~l~~~~~~~~~~~~~~ 168 (521)
|++||||||.||||+|+|..+||+|+||+|+ |||+|+++.|..+|+++|+|+++ ++.+.+.+++.+...+++
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g~~~g~------ 76 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQLLPIYDK-PMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGDGSEFGI------ 76 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGTC------
T ss_pred cEEEEECCCCCCcCCcccCCCCceeeEECCe-eHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhcccccCc------
Confidence 7999999999999999999999999999986 99999999999999999999886 667888888877433321
Q ss_pred CcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-eccccHHHHHHHHHhcCCcEEEEEEecCcccC
Q 009971 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRMDYERFIQAHRETDADITVAALPMDEKRA 247 (521)
Q Consensus 169 ~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~dl~~ll~~h~~~~aditi~~~~~~~~~~ 247 (521)
. +.++. +. ++.|+++++..++.+++ .++++++.||+ +++.++.++++.|.+.+.+.+++..+..+ +
T Consensus 77 ~-i~~~~--~~-----~~~G~~~al~~a~~~i~---~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~d--p 143 (296)
T 1mc3_A 77 Q-LEYAE--QP-----SPDGLAQAFIIGETFLN---GEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMD--P 143 (296)
T ss_dssp E-EEEEE--CS-----SCCCSTHHHHHTHHHHT---TSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEECSC--C
T ss_pred e-EEEec--cC-----CCCCHHHHHHHHHHHhC---CCCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEECCC--c
Confidence 1 22221 21 13799999999988885 25788888999 44678999999997777777887776554 5
Q ss_pred cceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCC-CCCCh-hh
Q 009971 248 TAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP-GANDF-GS 325 (521)
Q Consensus 248 ~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~-~~~d~-~~ 325 (521)
..||++..|++|+|+.|.|||..+. ++++++|+|+|+++++. .++...+ ...++ .+
T Consensus 144 ~~yg~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~-~~~~~~~~~~ge~~~t 201 (296)
T 1mc3_A 144 ERFGVVEFDDNFRAISLEEKPKQPK---------------------SNWAVTGLYFYDSKVVE-YAKQVKPSERGELEIT 201 (296)
T ss_dssp SSSBBCEEETTEEEEECCBSCSSCS---------------------CSEEEEEEEECCTHHHH-HHHSCCCCSSSSCCHH
T ss_pred ccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEEEEEcHHHHH-HHHhcCccccCCccHH
Confidence 5799999988899999999985332 35899999999999986 4443222 12223 37
Q ss_pred cchHhhhhCCceEEEEEec-ce-EEecCCHHHHHHHhhhcc
Q 009971 326 EVIPGATSIGMRVQAYLYD-GY-WEDIGTIEAFYNANLGIT 364 (521)
Q Consensus 326 dil~~li~~~~~I~~~~~~-g~-w~dIgt~edy~~An~~ll 364 (521)
++++.+++. .++.++.+. ++ |.||||++||.+|+..+.
T Consensus 202 d~~~~~l~~-g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (296)
T 1mc3_A 202 SINQMYLEA-GNLTVELLGRGFAWLDTGTHDSLIEASTFVQ 241 (296)
T ss_dssp HHHHHHHHT-TCEEEEECCTTCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCeEEEEeCCCCEEEeCCCHHHHHHHHHHHH
Confidence 888888874 467777775 74 999999999999998664
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.96 E-value=1.9e-29 Score=255.09 Aligned_cols=243 Identities=18% Similarity=0.286 Sum_probs=156.6
Q ss_pred CccEEEEEEeCCCCCCCCcccc-CCCccceecC-CCcchhHHHHHHhHhCCCceEEEEecCCh-HHHHHHHHHhhhccCC
Q 009971 87 SRSVLGIILGGGAGTRLYPLTK-KRAKPAVPLG-ANYRLIDIPVSNCLNSNISKIYVLTQFNS-ASLNRHLSRAYASNMG 163 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~-~~PK~LlpI~-G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~ 163 (521)
.++|+|||||||.||||+|||. .+||+|+||+ |+ |||+|+++++.++ +++|+|++++.. +.+.+++.+. ++
T Consensus 2 ~~~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~-pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~--~~-- 75 (308)
T 2qh5_A 2 SLKIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHK-SLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE--IK-- 75 (308)
T ss_dssp -CCEEEEEECC-------------CCGGGCTTBTTB-CHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT--CS--
T ss_pred CCccEEEEEcCCCCccCCccCCCCCCCEEEECCCCC-CHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh--hC--
Confidence 3568999999999999999997 8999999995 65 9999999999999 999999999875 5777877652 11
Q ss_pred CCcCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeec-ccc-HHHHHHH---HHhcCCcEEEE
Q 009971 164 GYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLY-RMD-YERFIQA---HRETDADITVA 238 (521)
Q Consensus 164 ~~~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~-~~d-l~~ll~~---h~~~~aditi~ 238 (521)
...+.++... +..||+++++.++..+. .++.||+++||+++ +.+ +.++++. |.+.++++|+.
T Consensus 76 ----~~~~~~i~~~-------~~~gt~~al~~a~~~l~--~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 142 (308)
T 2qh5_A 76 ----NKSVGFLLES-------LSKNTANAIALSALMSD--KEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFG 142 (308)
T ss_dssp ----SCEEEEEEES-------SCCCHHHHHHHHHHTSC--TTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ----CCccEEEeCC-------CCCChHHHHHHHHHHhC--CCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 1012333211 13899999999987773 13469999999977 666 9999987 77777788888
Q ss_pred EEecCcccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCC
Q 009971 239 ALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP 318 (521)
Q Consensus 239 ~~~~~~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~ 318 (521)
+.+.. ++..||++..|++++|..|.|||.......+ .....+++++|+|+|++++|.+.+++..+
T Consensus 143 ~~~~~--~~~~~g~i~~d~~~~V~~~~Ekp~~~~~~~~-------------~~~g~~~~n~Giy~~~~~~ll~~l~~~~p 207 (308)
T 2qh5_A 143 VSIDK--PNTEFGYIESPNGLDVKRFIEKPSLDKAIEF-------------QKSGGFYFNSGMFVFQAGVFLDELKKHAP 207 (308)
T ss_dssp EECSS--CCTTSEEEECSSSSBCSEEEESCCHHHHHHH-------------HHHCCEEEEEEEEEEEHHHHHHHHHHHCH
T ss_pred EecCC--CCCCceEEEECCCCEEEEEEECCChHHHHHH-------------hhcCCeEEEeEEEEEEHHHHHHHHHHhCh
Confidence 87654 3467999988877999999999986532111 00124699999999999886444443221
Q ss_pred C------------C------CChh---hcchH--------h-hhhCCceEEEEEecceEEecCCHHHHHHHhhhc
Q 009971 319 G------------A------NDFG---SEVIP--------G-ATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGI 363 (521)
Q Consensus 319 ~------------~------~d~~---~dil~--------~-li~~~~~I~~~~~~g~w~dIgt~edy~~An~~l 363 (521)
. . .++. .++++ . +++++.++++++++++|.||||+++|.+++..-
T Consensus 208 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~~ 282 (308)
T 2qh5_A 208 TILKGCERAFESLENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANE 282 (308)
T ss_dssp HHHHHHHHHGGGCEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC--------------
T ss_pred HHHHHHHHHhhccccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhcC
Confidence 1 0 1111 24443 2 566578999999999999999999999998654
No 20
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.95 E-value=5.7e-28 Score=246.94 Aligned_cols=235 Identities=20% Similarity=0.297 Sum_probs=172.9
Q ss_pred EEEEEEeCCCCCCCCccc-cCCCccceecCCCcchhHHHHHHhHhC-CCceEEEEecCCh-HHHHHHHHHhhhccCCCCc
Q 009971 90 VLGIILGGGAGTRLYPLT-KKRAKPAVPLGANYRLIDIPVSNCLNS-NISKIYVLTQFNS-ASLNRHLSRAYASNMGGYK 166 (521)
Q Consensus 90 ~~aVILAaG~GtRl~PlT-~~~PK~LlpI~G~~pLI~~~l~~l~~~-gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~~ 166 (521)
|++||||||.||||+||| ..+||+|+|++|.+|||+|+++++.++ |+++|+|++++.. ..+.+++.+...+
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~~~~------ 75 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELPDE------ 75 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTSCGG------
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhccccc------
Confidence 799999999999999999 779999999998349999999999996 8999999999864 5677777652111
Q ss_pred CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeeccc--cHHH----HHHHHHhcCCcEEEEEE
Q 009971 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRM--DYER----FIQAHRETDADITVAAL 240 (521)
Q Consensus 167 ~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~--dl~~----ll~~h~~~~aditi~~~ 240 (521)
. + ++.+. ..||+.++..+...+. ..+.+++++||+++.. ++.. +++.|.++++.+|+.+.
T Consensus 76 --~-i-i~e~~--------~~gta~ai~~a~~~~~--~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~ 141 (336)
T 2x65_A 76 --N-I-IAEPM--------KKNTAPACFIGTKLAD--DDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIV 141 (336)
T ss_dssp --G-E-EEESS--------CCCHHHHHHHHHTTSC--TTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEEC
T ss_pred --e-E-EeCCC--------CCCcHHHHHHHHHhhC--CCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEee
Confidence 1 1 22211 3799999998876442 2467999999997643 4544 44557666777777776
Q ss_pred ecCcccCcceeEEEeCCC-----CCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhh
Q 009971 241 PMDEKRATAFGLMKIDEE-----GRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRD 315 (521)
Q Consensus 241 ~~~~~~~~~~g~v~~d~~-----grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~ 315 (521)
+... .+.||++..+++ ++|..|.|||.....+.+ .....+++++|+|+|+++.|.+.+++
T Consensus 142 p~~~--~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~-------------~~~g~y~~n~Giy~~~~~~ll~~l~~ 206 (336)
T 2x65_A 142 PTRP--ETGYGYIEIGEELEEGVHKVAQFREKPDLETAKKF-------------VESGRFLWNSGMFLWKAREFIEEVKV 206 (336)
T ss_dssp CCSC--CSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHHH-------------HHHTCEEEEEEEEEEEHHHHHHHHHH
T ss_pred cccC--CCCceEEEECCccCCCccEEEEEEECCChHHHHHH-------------HhcCCeEEEeeeEEEEHHHHHHHHHH
Confidence 6443 468999988754 799999999987543211 01224799999999999887544443
Q ss_pred hCCC----------CC-ChhhcchHh---------hhhCCceEEEEEecceEEecCCHHHHHHH
Q 009971 316 KFPG----------AN-DFGSEVIPG---------ATSIGMRVQAYLYDGYWEDIGTIEAFYNA 359 (521)
Q Consensus 316 ~~~~----------~~-d~~~dil~~---------li~~~~~I~~~~~~g~w~dIgt~edy~~A 359 (521)
..+. .. +|..++++. +++++.++++++++++|.||||+++|+++
T Consensus 207 ~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 207 CEPSIYENLKDVDPRNFEELKKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp HCHHHHHHHTTCCTTCHHHHHHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred HCHHHHHHHHHhhhhhhhHHHHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 2221 01 344566665 45557899999999999999999999999
No 21
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.95 E-value=1.8e-27 Score=243.34 Aligned_cols=234 Identities=22% Similarity=0.298 Sum_probs=167.8
Q ss_pred cEEEEEEeCCCCCCCCccc-cCCCccceecCCCcchhHHHHHHhHhC-CCceEEEEecCCh-HHHHHHHHHhhhccCCCC
Q 009971 89 SVLGIILGGGAGTRLYPLT-KKRAKPAVPLGANYRLIDIPVSNCLNS-NISKIYVLTQFNS-ASLNRHLSRAYASNMGGY 165 (521)
Q Consensus 89 ~~~aVILAaG~GtRl~PlT-~~~PK~LlpI~G~~pLI~~~l~~l~~~-gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~ 165 (521)
+|.+||||||.||||+||| ..+||+|+|++|.+|||+|+++++.++ |+++|+|++++.. ..+.+++..
T Consensus 2 ~m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~~--------- 72 (337)
T 2cu2_A 2 KTYALVMAGGRGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADG--------- 72 (337)
T ss_dssp CEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSS---------
T ss_pred CeEEEEEcCCCcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhcc---------
Confidence 5899999999999999999 689999999998349999999999998 8999999998764 344444332
Q ss_pred cCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhc-CcceEEEEeCCeeccc--cHHHHHH----HHHhcCCcEEEE
Q 009971 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEH-NVLEFLVLAGDHLYRM--DYERFIQ----AHRETDADITVA 238 (521)
Q Consensus 166 ~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~-~~~~~Lvl~gD~l~~~--dl~~ll~----~h~~~~aditi~ 238 (521)
..+ ++.+ +..||+.++..+.. +... .++.+++++||+++.. ++..+++ .|.+ ++.+|+.
T Consensus 73 ---~~~-i~e~--------~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~ 138 (337)
T 2cu2_A 73 ---IRL-LLEP--------LGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALG 138 (337)
T ss_dssp ---SEE-EEES--------SCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEE
T ss_pred ---Cce-EecC--------CCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEe
Confidence 111 2221 13789999998877 5422 3578999999997642 3555444 3433 5677777
Q ss_pred EEecCcccCcceeEEEeCCC----CCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHh
Q 009971 239 ALPMDEKRATAFGLMKIDEE----GRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR 314 (521)
Q Consensus 239 ~~~~~~~~~~~~g~v~~d~~----grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~ 314 (521)
+.+.. +++.||++..+++ ++|..|.|||.....+.+ .... +++++|+|+|+++.|.+.++
T Consensus 139 i~p~~--~~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~~-------------~~~g-~~~n~Giy~f~~~~ll~~l~ 202 (337)
T 2cu2_A 139 LRPTR--PETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEY-------------IRKG-YVWNGGVFAFAPATMAELFR 202 (337)
T ss_dssp ECCSS--CCSSSCEEEEEEEETTEEEEEEEECCCCHHHHHHH-------------HHTT-CEEEEEEEEECHHHHHHHHH
T ss_pred eccCC--CCCCceEEEECCcccccCeEEEEEeCCChHHHHHH-------------hhcC-CEEEEEEEEEeHHHHHHHHH
Confidence 76654 3468999988765 799999999986543211 0112 69999999999998754554
Q ss_pred hhCCCC---------CChhhcchHh---------hhhCCceEEEEEecceEEecCCHHHHHHHhh
Q 009971 315 DKFPGA---------NDFGSEVIPG---------ATSIGMRVQAYLYDGYWEDIGTIEAFYNANL 361 (521)
Q Consensus 315 ~~~~~~---------~d~~~dil~~---------li~~~~~I~~~~~~g~w~dIgt~edy~~An~ 361 (521)
+..+.. +....+.++. +++++.++++++++++|.||||+++|+++..
T Consensus 203 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~~ 267 (337)
T 2cu2_A 203 RHLPSHHEALERLLAGASLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERVFS 267 (337)
T ss_dssp HHCHHHHHHHHHHHTTCCHHHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHHT
T ss_pred HHCHHHHHHHHHHhcCCcHHHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHhh
Confidence 332210 0001233443 4555789999999999999999999999864
No 22
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.94 E-value=7.4e-27 Score=229.65 Aligned_cols=221 Identities=13% Similarity=0.166 Sum_probs=159.6
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcC
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (521)
++|.|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++..+++.++... +.
T Consensus 24 ~~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~-~~-------- 93 (254)
T 1jyk_A 24 IRVKAIILAAGLGTRLRPLTENTPKALVQVNQK-PLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKEK-YG-------- 93 (254)
T ss_dssp CCCEEEEEECSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHHH-HC--------
T ss_pred cCceEEEECCCCcccCCcccCCCCCEEeeECCE-EHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHHHh-CC--------
Confidence 368999999999999999999999999999986 99999999999999999999999887777554432 21
Q ss_pred CCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeecccc-HHHHHHHHHhcCCcEEEEEEecCccc
Q 009971 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDADITVAALPMDEKR 246 (521)
Q Consensus 168 ~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~aditi~~~~~~~~~ 246 (521)
+.++...+ . ...|++++++.++..++ ++++++||+++..+ +..++ +.++.+++. ..+ .
T Consensus 94 ---~~iv~~~~--~---~~~g~~~al~~a~~~~~-----~~lv~~~D~~~~~~~~~~~~----~~~~~~t~~---~~~-~ 152 (254)
T 1jyk_A 94 ---VRLVFNDK--Y---ADYNNFYSLYLVKEELA-----NSYVIDADNYLFKNMFRNDL----TRSTYFSVY---RED-C 152 (254)
T ss_dssp ---CEEEECTT--T---TTSCTHHHHHTTGGGCT-----TEEEEETTEEESSCCCCSCC----CSEEEEECE---ESS-C
T ss_pred ---cEEEECCC--c---cCCCcHHHHHHHHHHCC-----CEEEEeCCcccCHHHHHHHH----hCCceEEEE---ccc-C
Confidence 23332211 0 13799999998876653 48999999976545 33322 222223322 221 1
Q ss_pred CcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHH---HHHhhhCC---CC
Q 009971 247 ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVML---NLLRDKFP---GA 320 (521)
Q Consensus 247 ~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~---~ll~~~~~---~~ 320 (521)
...|+++ +|++|+|+.|.|++. ..++++|+|+|+++.+. +++++... ..
T Consensus 153 ~~~~~v~-~d~~g~v~~~~e~~~------------------------~~~~~~Giy~~~~~~~~~l~~~l~~~~~~~~~~ 207 (254)
T 1jyk_A 153 TNEWFLV-YGDDYKVQDIIVDSK------------------------AGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFV 207 (254)
T ss_dssp SSCCEEE-ECTTCBEEEEECCCS------------------------SEEBCCSEEEECHHHHHHHHHHHHHHHTTTCCT
T ss_pred CCCeEEE-ECCCCeEEEEEECCC------------------------CCcEEEEEEEEcHHHHHHHHHHHHHHHhcCCcc
Confidence 2357754 788899999998653 23889999999987433 33332221 12
Q ss_pred CChhhcchHhhhhCCceEEEEEec-ceEEecCCHHHHHHHhhhccc
Q 009971 321 NDFGSEVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGITK 365 (521)
Q Consensus 321 ~d~~~dil~~li~~~~~I~~~~~~-g~w~dIgt~edy~~An~~ll~ 365 (521)
..+.++++..+++ +.+++++.++ ++|.+|||++||.+|++.+..
T Consensus 208 e~~~~d~~~~l~~-~~~v~~~~~~~~~~~~Idt~edl~~a~~~l~~ 252 (254)
T 1jyk_A 208 DLYWDNMVKDNIK-ELDVYVEELEGNSIYEIDSVQDYRKLEEILKN 252 (254)
T ss_dssp TCCTTHHHHTTGG-GCCEEEEECCTTSEEECCSHHHHHHHHHHHC-
T ss_pred ccCHHHHHHHHHh-hCCeEEEEecCCeEEEcCCHHHHHHHHHHhhh
Confidence 3445777777766 7899999998 799999999999999987653
No 23
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.94 E-value=5.8e-26 Score=222.98 Aligned_cols=240 Identities=15% Similarity=0.174 Sum_probs=173.3
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcC
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (521)
|++.|||||+|.|||| | ||+|+||+|+ |||+|+++++.++|+++|+|+++ .+.+.+++.+ +.
T Consensus 1 M~~~aiIlA~G~stRl-p-----~K~L~~i~Gk-Pli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~-~g-------- 62 (252)
T 3oam_A 1 MSFTVVIPARYQSTRL-P-----GKPLADIGGK-PMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA-FG-------- 62 (252)
T ss_dssp CCEEEEEECCCCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH-TT--------
T ss_pred CceEEEEecCcCCCCC-C-----CcceeeECCE-EHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH-cC--------
Confidence 3689999999999999 3 7999999987 99999999999999999999994 5788888875 21
Q ss_pred CCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ec-cccHHHHHHHHHhcCCcEEEEEEecCcc
Q 009971 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LY-RMDYERFIQAHRETDADITVAALPMDEK 245 (521)
Q Consensus 168 ~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~-~~dl~~ll~~h~~~~aditi~~~~~~~~ 245 (521)
++++... ++++.||++ +..++..++....+.||+++||. ++ ..++.++++.|.++++++++++.+.++
T Consensus 63 ---~~v~~~~-----~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~- 132 (252)
T 3oam_A 63 ---GVVCMTS-----PNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIED- 132 (252)
T ss_dssp ---CEEEECC-----TTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECC-
T ss_pred ---CEEEEcC-----CCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCC-
Confidence 2232211 123488887 56666665311257899999999 44 467999999998888899999888764
Q ss_pred cCcce-----eEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCC
Q 009971 246 RATAF-----GLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGA 320 (521)
Q Consensus 246 ~~~~~-----g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~ 320 (521)
+..| +.+..|++|+++.|.++|..+...+..-.. .....+++.++|+|+|++++|..+... .+..
T Consensus 133 -~~~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~~~~~~~~--------~~~~~~~~~n~GiY~~~~~~l~~~~~~-~~~~ 202 (252)
T 3oam_A 133 -EAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKAD--------KAIVQPLLRHIGIYAYRAGFINTYLDW-QPSQ 202 (252)
T ss_dssp -HHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHHSSS--------CCCCSCEEEEEEEEEEETTHHHHHHHS-CCCH
T ss_pred -HHHhhCCCceEEEECCCCeEEEEeCCCCCCCCCcccccc--------ccccccceEEEEEEEcCHHHHHHHHcC-CCCc
Confidence 3445 889999999999999987543211100000 000125799999999999999876653 2211
Q ss_pred CChhhcchHh--hhhCCceEEEEEec-ceEEecCCHHHHHHHhhhcccC
Q 009971 321 NDFGSEVIPG--ATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGITKK 366 (521)
Q Consensus 321 ~d~~~dil~~--li~~~~~I~~~~~~-g~w~dIgt~edy~~An~~ll~~ 366 (521)
.+. .+.|.+ ++++|.+|.++..+ .+|.||||++||.+|+..+..+
T Consensus 203 ~e~-~E~le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 203 LEK-IECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp HHH-HHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred ccc-cchhHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhh
Confidence 111 123332 34558999998775 4689999999999999877654
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.92 E-value=4.2e-24 Score=209.90 Aligned_cols=237 Identities=14% Similarity=0.112 Sum_probs=163.9
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcC
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (521)
|++.|||||+|.||||. ||+|+||+|+ |||+|+++++.++|+++|+|+++ .+.+.+++.+ +.
T Consensus 8 M~~~aIIlA~G~stRl~------~K~L~~i~Gk-Pli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~-~g-------- 69 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRLP------GKALVDIAGK-PMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED-FG-------- 69 (256)
T ss_dssp -CCEEEEECCCC---CT------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH-TT--------
T ss_pred CCceEEEEcCCCCCCCC------CCCeeeECCc-hHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH-cC--------
Confidence 56899999999999995 7999999987 99999999999999999999985 4777777764 21
Q ss_pred CCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhc-CCcEEEEEEecCc
Q 009971 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRET-DADITVAALPMDE 244 (521)
Q Consensus 168 ~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~-~aditi~~~~~~~ 244 (521)
++++.. .++++.|++. +..++..++....+.|+++.||. +++ .++.++++.|.+. ++++++++.+..+
T Consensus 70 ---~~v~~~-----~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~ 140 (256)
T 3tqd_A 70 ---AVVCMT-----SSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITE 140 (256)
T ss_dssp ---CEEEEC-----CTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCC
T ss_pred ---CeEEEe-----CCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCC
Confidence 223221 1234578865 77787777421357899999999 554 5699999999875 5677777777643
Q ss_pred ----ccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCC
Q 009971 245 ----KRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGA 320 (521)
Q Consensus 245 ----~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~ 320 (521)
.++..++ |..|++|+++.|.++|......... .........+++...|+|.|++++|..+... .+.
T Consensus 141 ~~~~~~p~~vk-vv~d~~g~~l~fsr~pip~~r~~~~-------~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l-~~s- 210 (256)
T 3tqd_A 141 VDELFNPHSTK-VVLNRRNYALYFSHAPIPWGRDTFS-------DKENLQLNGSHYRHVGIYAYRVGFLEEYLSW-DAC- 210 (256)
T ss_dssp HHHHTCTTSCE-EEECTTSBEEEEESSCSSCCTTTTT-------CGGGCCCSSCCEEEEEEEEEEHHHHHHHHHS-CCC-
T ss_pred HHHhhCCCccE-EEECCCCEEeEEecCCCCCCCcccc-------cccccccCCcceEEEEEEEcCHHHHHHHHhC-CCC-
Confidence 1233343 5678899999999998643211000 0000001235799999999999999866542 221
Q ss_pred CChh-hcchHh--hhhCCceEEEEEecce-EEecCCHHHHHHHhhh
Q 009971 321 NDFG-SEVIPG--ATSIGMRVQAYLYDGY-WEDIGTIEAFYNANLG 362 (521)
Q Consensus 321 ~d~~-~dil~~--li~~~~~I~~~~~~g~-w~dIgt~edy~~An~~ 362 (521)
.++ .+-|.+ ++++|++|+++.++++ |.+||||+||.+|+..
T Consensus 211 -~lE~~e~leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~~ 255 (256)
T 3tqd_A 211 -PAEKMEALEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRAY 255 (256)
T ss_dssp -HHHHHHTCTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHTT
T ss_pred -cccchhhhHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHHh
Confidence 122 233332 3566999999999875 8999999999999864
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.92 E-value=6.6e-24 Score=209.39 Aligned_cols=239 Identities=16% Similarity=0.167 Sum_probs=167.9
Q ss_pred CCccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCC
Q 009971 86 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGY 165 (521)
Q Consensus 86 ~~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~ 165 (521)
..|++.|||||||.||||. +|+|+||+|+ |||+|+++++.++|+++|+|+++ .+.+.+++.+ +.
T Consensus 15 ~~M~~~aIIlA~G~stRlp------~K~L~~i~Gk-Pmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~-~g------ 78 (264)
T 3k8d_A 15 SHMSFVVIIPARYASTRLP------GKPLVDINGK-PMIVHVLERARESGAERIIVATD--HEDVARAVEA-AG------ 78 (264)
T ss_dssp ---CCEEEEECCSCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH-TT------
T ss_pred CCCceEEEEEcCCCCCCCC------CcceeeECCe-EHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH-cC------
Confidence 3457899999999999993 5999999987 99999999999999999999984 5677777764 21
Q ss_pred cCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ec-cccHHHHHHHHHhcCCcEEEEEEecC
Q 009971 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LY-RMDYERFIQAHRETDADITVAALPMD 243 (521)
Q Consensus 166 ~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~-~~dl~~ll~~h~~~~aditi~~~~~~ 243 (521)
++++.. .++|+.||+. +..++..++....+.++++.||. ++ ..++.++++.+.+.++++++++.+..
T Consensus 79 -----~~v~~~-----~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~ 147 (264)
T 3k8d_A 79 -----GEVCMT-----RADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIH 147 (264)
T ss_dssp -----CEEEEC-----CTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECC
T ss_pred -----CEEEEe-----cCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcC
Confidence 223221 1234578866 77777776422357899999999 44 46699999999888889999988875
Q ss_pred cc----cCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCC
Q 009971 244 EK----RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG 319 (521)
Q Consensus 244 ~~----~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~ 319 (521)
+. ++..+ .+..|++|+++.|.+||..........+ +.....+++.++|+|.|++++|..+... .+
T Consensus 148 d~~~~~~p~~v-kVv~d~~g~~l~fsr~~ip~~r~~~~~~--------~~~~~~~~~~~~GiY~y~~~~l~~~~~~-~~- 216 (264)
T 3k8d_A 148 NAEEAFNPNAV-KVVLDAEGYALYFSRATIPWDRDRFAEG--------LETVGDNFLRHLGIYGYRAGFIRRYVNW-QP- 216 (264)
T ss_dssp SHHHHTCTTSC-EEEECTTSBEEEEESSCCSCCHHHHHHC--------SSCCCSCCEEECSEEEEEHHHHHHHHHS-CC-
T ss_pred CHHHccCCCce-EEEECCCCeEEEEecCCCCCCCcccccc--------ccccCCcceEEEEEEEECHHHHHHHHhC-CC-
Confidence 42 12222 3567889999999999753211100000 0000124799999999999999876552 12
Q ss_pred CCChh-hcchHh--hhhCCceEEEEEec-ceEEecCCHHHHHHHhhhc
Q 009971 320 ANDFG-SEVIPG--ATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGI 363 (521)
Q Consensus 320 ~~d~~-~dil~~--li~~~~~I~~~~~~-g~w~dIgt~edy~~An~~l 363 (521)
..++ .+.|.+ ++++|++|+++... .+|.+||||+||..|+..+
T Consensus 217 -~~lE~~e~leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~l 263 (264)
T 3k8d_A 217 -SPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEM 263 (264)
T ss_dssp -CHHHHHHTCTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHHC
T ss_pred -ChhhhHHHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHh
Confidence 1122 233332 34669999999765 4689999999999998654
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.90 E-value=1.9e-22 Score=195.02 Aligned_cols=225 Identities=17% Similarity=0.206 Sum_probs=155.5
Q ss_pred cEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcCC
Q 009971 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (521)
Q Consensus 89 ~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (521)
++.|||||||.|+||+ ||+|+|++|+ |||+|+++++.++ +++|+|++++ +++.+++.+.
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~i~g~-pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~~----------- 60 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK------EKPLKNLLGK-PLIRWVVEGLVKT-GERVILATDS--ERVKEVVEDL----------- 60 (234)
T ss_dssp CEEEEEECCSCCTTTT------TGGGCEETTE-EHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTTT-----------
T ss_pred ceEEEEEcCCCCCCCC------CCcceeECCE-EHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHhc-----------
Confidence 5899999999999997 8999999987 9999999999999 9999999976 6677776541
Q ss_pred CcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEEecC-cc
Q 009971 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMD-EK 245 (521)
Q Consensus 169 ~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~~~~-~~ 245 (521)
+.++... +.+..|++.++ .++..+ ..+.+++++||+ +++ .++.++++.|.+.++.+++...... ..
T Consensus 61 --~~~~~~~-----~~~~~g~~~~~-~~~~~~---~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 129 (234)
T 2y6p_A 61 --CEVFLTP-----SDLPSGSDRVL-YVVRDL---DVDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKEAYE 129 (234)
T ss_dssp --SEEEECC-----TTCCSHHHHHH-HHHTTC---CCSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSGGGG
T ss_pred --eEEEECC-----cccccchHHHH-HHHHhC---CCCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHHHhc
Confidence 1222111 11236777755 444333 247899999999 887 6799999999887744444443211 11
Q ss_pred cCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCChhh
Q 009971 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGS 325 (521)
Q Consensus 246 ~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~~~ 325 (521)
++..++ +..|++|++..|.+||....... ...+.+.++|+|+|+++.|..+... .+...+. .
T Consensus 130 ~~~~~~-~~~~~~g~v~~~~e~~~~~~~~~---------------~~~~~~~~~giy~~~~~~l~~~~~~-~~~~~~~-~ 191 (234)
T 2y6p_A 130 RPEDVK-VVLDREGYALYFSRSPIPYFRKN---------------DTFYPLKHVGIYGFRKETLMEFGAM-PPSKLEQ-I 191 (234)
T ss_dssp CTTSCE-EEECTTSBEEEEESSCCSCCSSC---------------CSSCCEEEEEEEEEEHHHHHHHHHS-CCCHHHH-H
T ss_pred CCCceE-EEEcCCCCEeeeecCCCCccccc---------------ccceeeEEEEEEEcCHHHHHHHHhC-CCCccch-h
Confidence 233344 34577899999999874310000 0002478999999999998766542 1111111 1
Q ss_pred cchH--hhhhCCceEEEEEecceEEecCCHHHHHHHhhhc
Q 009971 326 EVIP--GATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGI 363 (521)
Q Consensus 326 dil~--~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~l 363 (521)
+.+. .++..+.+++++..+++|.||+|++||..|+..+
T Consensus 192 d~~~~~~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~~ 231 (234)
T 2y6p_A 192 EGLEQLRLLENGIKIKVLITENYYHGVDTEEDLKIVEEKL 231 (234)
T ss_dssp HTCTHHHHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHHC
T ss_pred hHHHHHHHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHHH
Confidence 1121 2344488999999999999999999999998765
No 27
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.89 E-value=4.2e-22 Score=195.32 Aligned_cols=238 Identities=13% Similarity=0.113 Sum_probs=166.8
Q ss_pred EEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHH-HHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcCC
Q 009971 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPV-SNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (521)
Q Consensus 90 ~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l-~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (521)
+.|||||+|.||||. +|+|+||+|+ |||+|++ +.+.++++++|+|+++ .+.+.+++.+ +.
T Consensus 2 ~~aiIlA~G~stR~~------~K~L~~i~Gk-Pli~~~i~~~~~~~~~~~vvVvt~--~~~i~~~~~~-~g--------- 62 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP------GKPLLLIHDR-PMILRVVDQAKKVEGFDDLCVATD--DERIAEICRA-EG--------- 62 (253)
T ss_dssp EEEEEECCSCCTTST------TGGGSEETTE-EHHHHHHHHHHTCTTCCEEEEEES--CHHHHHHHHT-TT---------
T ss_pred eEEEEEeCCCCCCCC------CCceeeECCe-EhHHHHHHHHHHhcCCCEEEEECC--HHHHHHHHHH-cC---------
Confidence 579999999999997 4999999997 9999999 9999999999999995 4677777654 11
Q ss_pred CcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhc-CCcEEEEEEecCc-
Q 009971 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRET-DADITVAALPMDE- 244 (521)
Q Consensus 169 ~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~-~aditi~~~~~~~- 244 (521)
++++... +++..|+ +++..++..++....+.+|++.||. +.+ ..+.++++.|.+. +.+++.++.+..+
T Consensus 63 --~~v~~~~-----~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~ 134 (253)
T 4fcu_A 63 --VDVVLTS-----ADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHAL 134 (253)
T ss_dssp --CCEEECC-----TTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCH
T ss_pred --CeEEEeC-----CCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCH
Confidence 1222111 1223677 5788888777532357899999999 665 5699999999876 3455444444321
Q ss_pred ---ccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCC
Q 009971 245 ---KRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN 321 (521)
Q Consensus 245 ---~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~ 321 (521)
.++..+ .+..|++|+++.|.++|..........+.+ .....++.++|+|+|++++|..+... + ..
T Consensus 135 ~~~~~p~~~-kvv~d~~g~~l~fsr~~ip~~r~~~~~~~~--------~~~~~~~~~~GiY~f~~~~l~~~~~~--~-~~ 202 (253)
T 4fcu_A 135 DEFQRDSIV-KVVMSKQNEALYFSRATIPYDRDGAKRDEP--------TLHTQAFRHLGLYAYRVSLLQEYVTW--E-MG 202 (253)
T ss_dssp HHHHCTTSC-EEEECTTSBEEEEESSCCSCCTTTSSSSSC--------CCCSCCEEEEEEEEEEHHHHHHHTTS--C-CC
T ss_pred HHccCCCcc-EEEECCCCeEEEecCCCCCCCCCccccccc--------ccccceeEEEEEEEeCHHHHHHHHhC--C-CC
Confidence 234444 456788999999999875432111000000 00124688999999999999876532 2 22
Q ss_pred Chh-hcchHhh--hhCCceEEEEEecce-EEecCCHHHHHHHhhhcccC
Q 009971 322 DFG-SEVIPGA--TSIGMRVQAYLYDGY-WEDIGTIEAFYNANLGITKK 366 (521)
Q Consensus 322 d~~-~dil~~l--i~~~~~I~~~~~~g~-w~dIgt~edy~~An~~ll~~ 366 (521)
.++ .|.|.++ +++|++|+++..+++ |.+||||+||..|+..+..|
T Consensus 203 ~le~~e~le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~~r 251 (253)
T 4fcu_A 203 KLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVES 251 (253)
T ss_dssp HHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCGGG
T ss_pred cccchhHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 232 3445543 466999999999999 99999999999999877654
No 28
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.89 E-value=3.4e-22 Score=194.68 Aligned_cols=229 Identities=16% Similarity=0.263 Sum_probs=160.1
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCC-ceEEEEecCChHHHHHHHHHhhhccCCCCc
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNI-SKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi-~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (521)
|++.|||||||.|+|| | ||+|+|++|+ |||+|+++.+.++|+ ++|+|++++ +.+.+++.+ +.
T Consensus 1 m~~~aiIlA~G~~~R~-~-----~K~l~~i~g~-pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~-~~------- 63 (245)
T 1h7e_A 1 SKAVIVIPARYGSSRL-P-----GKPLLDIVGK-PMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQA-FG------- 63 (245)
T ss_dssp CCEEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHH-TT-------
T ss_pred CCeEEEEEcCCcCCCC-C-----CCcccccCCc-hHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHH-cC-------
Confidence 3589999999999999 5 8999999987 999999999999996 999999975 677777765 11
Q ss_pred CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhc-CCcEEEEEEecC
Q 009971 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRET-DADITVAALPMD 243 (521)
Q Consensus 167 ~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~-~aditi~~~~~~ 243 (521)
++++... +.+..|+++.+ .++..++ .+.+++++||+ +.+ .++.++++.|.+. ++++++++.+.+
T Consensus 64 ----~~~~~~~-----~~~~~g~~~~~-~~~~~~~---~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 130 (245)
T 1h7e_A 64 ----GKAIMTR-----NDHESGTDRLV-EVMHKVE---ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAIS 130 (245)
T ss_dssp ----CEEEECC-----SCCSSHHHHHH-HHHHHSC---CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEEC
T ss_pred ----CeEEeCC-----CccCCcHHHHH-HHHHhCC---CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecCC
Confidence 2333211 12336775544 4444442 47899999999 444 5699999999887 788877776652
Q ss_pred ccc--CcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCC
Q 009971 244 EKR--ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN 321 (521)
Q Consensus 244 ~~~--~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~ 321 (521)
... ...+..+..+++|++..|.+++....... ...+.+.++|+|+|+++.+..++. .+ ..
T Consensus 131 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~r~~---------------~~~~~~~~~g~y~~~~~~l~~~~~--~~-~~ 192 (245)
T 1h7e_A 131 AAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNA---------------EKARYLKHVGIYAYRRDVLQNYSQ--LP-ES 192 (245)
T ss_dssp HHHHTCTTSCEEEECTTCBEEEEESSCSSCCTTG---------------GGCCEEEEEEEEEEEHHHHHHGGG--SC-CC
T ss_pred HHHhcCCCCcEEEECCCCcEEEeecCCCCCCccc---------------ccCceeEEEEEEEcCHHHHHHHHh--CC-CC
Confidence 111 01121223367889999987643211000 001247899999999998866552 22 22
Q ss_pred Ch-hhcchHhhh--hCCceEEEEEecceEEecCCHHHHHHHhhhcc
Q 009971 322 DF-GSEVIPGAT--SIGMRVQAYLYDGYWEDIGTIEAFYNANLGIT 364 (521)
Q Consensus 322 d~-~~dil~~li--~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll 364 (521)
++ .++.++.+. +.|.+++++..+++|+||||++||..|+..+.
T Consensus 193 ~~~~td~~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~ 238 (245)
T 1h7e_A 193 MPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMA 238 (245)
T ss_dssp HHHHHHTCTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHH
Confidence 22 356665543 55889999999999999999999999987654
No 29
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.88 E-value=1.8e-21 Score=191.93 Aligned_cols=246 Identities=15% Similarity=0.141 Sum_probs=163.6
Q ss_pred cEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcCC
Q 009971 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (521)
Q Consensus 89 ~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (521)
++.|||||||.|+||. +|+|+|++|+ |||+|++++|.++++++|+|++++ +.+.+++.+ +.
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~~~gk-pli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~-~~--------- 62 (262)
T 1vic_A 2 SFTVIIPARFASSRLP------GKPLADIKGK-PMIQHVFEKALQSGASRVIIATDN--ENVADVAKS-FG--------- 62 (262)
T ss_dssp CCEEEEECCCCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH-TT---------
T ss_pred CcEEEEEcCCCCCCCC------CCccccCCCe-EHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh-cC---------
Confidence 5799999999999995 3999999987 999999999999999999999974 567777654 11
Q ss_pred CcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ec-cccHHHHHHHHHhcCCcEEEEEEecCccc
Q 009971 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LY-RMDYERFIQAHRETDADITVAALPMDEKR 246 (521)
Q Consensus 169 ~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~-~~dl~~ll~~h~~~~aditi~~~~~~~~~ 246 (521)
++++... +.+..|++ .+..++..++....+.+|+++||+ +. ..++.++++.|.+.++++++++.+..+..
T Consensus 63 --~~~~~~~-----~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 134 (262)
T 1vic_A 63 --AEVCMTS-----VNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAE 134 (262)
T ss_dssp --CEEEECC-----CSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECCCHH
T ss_pred --CEEEECC-----ccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecCCHH
Confidence 2232211 12336675 465666555422347899999999 44 46699999999888888888877765320
Q ss_pred ---CcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCCh
Q 009971 247 ---ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (521)
Q Consensus 247 ---~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~ 323 (521)
...+..+..+++|+++.|.+++..........+ +..... ..-..+..++|+|+|+++++..+... .+...+.
T Consensus 135 ~~~~~~~~~~~~~~~g~v~~f~~~~~~~~r~~~~~~---~~~~~~-~~p~~~~~~~giy~~~~~~l~~~~~~-~~~~~~~ 209 (262)
T 1vic_A 135 ELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNL---QDVQKV-QLSDAYLRHIGIYAYRAGFIKQYVQW-APTQLEN 209 (262)
T ss_dssp HHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHTTC---SCGGGC-CCCTTCEEEEEEEEEEHHHHHHHHHS-CCCHHHH
T ss_pred HhcCCCceEEEECCCCCEeeeecCCCCcCCcccccc---cccccc-ccccceEEEEEEEEeeHHHHHHHHhC-CCCchhh
Confidence 123444555778999999887532100000000 000000 00012589999999999988755432 1111111
Q ss_pred hhcchH--hhhhCCceEEEEEec-ceEEecCCHHHHHHHhhhcccCC
Q 009971 324 GSEVIP--GATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGITKKP 367 (521)
Q Consensus 324 ~~dil~--~li~~~~~I~~~~~~-g~w~dIgt~edy~~An~~ll~~~ 367 (521)
.+++. .+++.+.+++++..+ ++|+||+||+||..|+..+....
T Consensus 210 -~e~~~~~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~~~ 255 (262)
T 1vic_A 210 -LEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAANG 255 (262)
T ss_dssp -HHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHTC
T ss_pred -hhhHHHHHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHhcC
Confidence 11121 245458899999998 79999999999999998876554
No 30
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.88 E-value=1.3e-22 Score=196.22 Aligned_cols=214 Identities=16% Similarity=0.210 Sum_probs=134.7
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCc
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (521)
|++|.|||||||.|+||+|+ ||+|+|++|+ |||+|+++++.++ +++|+|++ +..+++.+++.+.+.
T Consensus 16 m~~~~~iIlA~G~g~R~~~~----~K~l~~i~g~-pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~~~~------- 81 (232)
T 2xme_A 16 IKLMKAVILAAGLGTRLGGV----PKPLVRVGGC-EIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLKDKG------- 81 (232)
T ss_dssp CCCEEEEEEECC------CC----CGGGCEETTE-EHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHTTSC-------
T ss_pred cccceEEEECCcCcCcCCCC----CcEEeEECCE-EHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHHhcC-------
Confidence 56799999999999999986 9999999986 9999999999999 99999999 777788787644221
Q ss_pred CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCeecccc-HHHHHHHHHhcCCcEEEEEEecCcc
Q 009971 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDADITVAALPMDEK 245 (521)
Q Consensus 167 ~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~aditi~~~~~~~~ 245 (521)
. .+.++.. +.|..|++++++.++..++ +++++++||+.++.+ +..+++.+ . +++.......
T Consensus 82 -~-~~~~v~~------~~~~~g~~~~i~~a~~~~~----~~~lv~~~D~p~~~~~~~~l~~~~-----~-~~~~~~~~~~ 143 (232)
T 2xme_A 82 -F-NYKIVRH------DRPEKGNGYSLLVAKNHVE----DRFILTMGDHVYSQQFIEKAVRGE-----G-VIADREPRFV 143 (232)
T ss_dssp -C-CEEEEEC------SCGGGCHHHHHHTTGGGCC----SSEEEEETTEEECHHHHHHHTTCC-----E-EEEESSCSSS
T ss_pred -C-cEEEEEC------CCCCCCcHHHHHHHHHHCC----CCEEEEcCCcccCHHHHHHHHhCC-----C-cEEEcccccc
Confidence 0 1344421 2233799999999887664 579999999976655 45554421 1 2222111111
Q ss_pred cCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCChhh
Q 009971 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGS 325 (521)
Q Consensus 246 ~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~~~ 325 (521)
+..+++.+..+ +|++..+.+++.. .+..++|+|+|++++|. .+.+... ..++
T Consensus 144 ~~~~~~~v~~~-~g~v~~~~~~~~~-----------------------~~~~~~g~~~~~~~~~~-~l~~~~~-~g~~-- 195 (232)
T 2xme_A 144 DIGEATKIRVE-DGRVAKIGKDLRE-----------------------FDCVDTGFFVLDDSIFE-HAEKLRD-REEI-- 195 (232)
T ss_dssp CTTTSCEEEEE-TTEEEEEETTCSS-----------------------CSEEEEEEEEECTTHHH-HHGGGTT-SSCC--
T ss_pred CCCcceEEEEc-CCEEEEeecCCCC-----------------------cceEEEEEEEECHHHHH-HHHHHHh-cChh--
Confidence 23456666665 6899999877642 24788999999999987 4443321 1111
Q ss_pred cchHhhhhCCceEEEEEec-ceEEecCCHHHHHHHhhh
Q 009971 326 EVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLG 362 (521)
Q Consensus 326 dil~~li~~~~~I~~~~~~-g~w~dIgt~edy~~An~~ 362 (521)
-+..+++ ..++..+.++ ++|.||+||+||.+|+..
T Consensus 196 -~l~~ll~-~~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 196 -PLSEIVK-LARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp -CHHHHHH-HHTCBEEECCSCCEEEEECC---------
T ss_pred -HHHHHHH-cCCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 1333443 2246666765 689999999999988754
No 31
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.87 E-value=3e-21 Score=188.61 Aligned_cols=231 Identities=15% Similarity=0.128 Sum_probs=157.1
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCC-CceEEEEecCChHH-HHHHHHHhhhccCCC
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSAS-LNRHLSRAYASNMGG 164 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~g-i~~I~Iv~~~~~~~-i~~~l~~~~~~~~~~ 164 (521)
|+++.|||||||.|+||++ ..+||+|+|++|+ |||+|+++++.+++ +++|+|++++.... +.+.+.+ +.+.
T Consensus 1 M~~~~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gk-pll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~-~~~~--- 73 (246)
T 3f1c_A 1 MSLIYAQILAGGKGTRMGN--VSMPKQFLPLNGK-PIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKK-YISD--- 73 (246)
T ss_dssp -CCEEEEEECC-----C-C--SSCCGGGSEETTE-EHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHH-HCCC---
T ss_pred CCccEEEEECCccccccCC--CCCCCeEEEECCe-eHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHH-hCCC---
Confidence 4568999999999999986 5789999999987 99999999999987 99999999876643 4444443 2211
Q ss_pred CcCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhc----CcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEE
Q 009971 165 YKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEH----NVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVA 238 (521)
Q Consensus 165 ~~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~----~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~ 238 (521)
..+.++.. + .+..++++.++..+.+. ..+.+|+++||. +.. ..+.++++.+.+.++.++
T Consensus 74 ----~~~~~~~~-~--------~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~i~-- 138 (246)
T 3f1c_A 74 ----DRIVVIEG-G--------EDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAVDT-- 138 (246)
T ss_dssp ----TTEEEEEC-C--------SSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEEE--
T ss_pred ----CCEEEECC-C--------CchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEEE--
Confidence 12444321 1 46788999999888641 257899999999 544 569999999988765443
Q ss_pred EEecCcccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCC
Q 009971 239 ALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP 318 (521)
Q Consensus 239 ~~~~~~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~ 318 (521)
+.+..+ .++..++++.+..+.+++.. +.--..++|+.+.|.+.++....
T Consensus 139 ~~~~~d------~i~~~~~~~~v~~~~~r~~l-------------------------~~~qtpq~f~~~~L~~a~~~~~~ 187 (246)
T 3f1c_A 139 VIEALD------TIVESSNHEVITDIPVRDHM-------------------------YQGQTPQSFNMKKVFNHYQNLTP 187 (246)
T ss_dssp EEECSS------CEEECSSSSBCCBCCCGGGE-------------------------EEEEEEEEEEHHHHHHHHHTSCH
T ss_pred EEeccc------eEEEecCCCeEEEecChHHh-------------------------hhhcCCceeEHHHHHHHHHHHHH
Confidence 344322 23444445566655555321 12224569998888777764211
Q ss_pred CCCChhhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhcccCCCCC
Q 009971 319 GANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPD 370 (521)
Q Consensus 319 ~~~d~~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~~~~~~ 370 (521)
....+.+|.+..+...|.++..++.+.+|++|+|++||..|+..+..+..++
T Consensus 188 ~~~~~~TD~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~~~~~ 239 (246)
T 3f1c_A 188 EKKQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQERIANE 239 (246)
T ss_dssp HHHHHCCCHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHHC---
T ss_pred cCCCccCcHHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhcccccC
Confidence 1122457788888777999999999999999999999999998877655433
No 32
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.85 E-value=1.3e-20 Score=182.05 Aligned_cols=221 Identities=13% Similarity=0.072 Sum_probs=143.9
Q ss_pred EEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhC-CCceEEEEecCCh-HHHHHHHHHhhhccCCCCcC
Q 009971 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNS-NISKIYVLTQFNS-ASLNRHLSRAYASNMGGYKN 167 (521)
Q Consensus 90 ~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~-gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~~~ 167 (521)
|.|||||||.|+||++ ..+||+|+|++|+ |||+|+++++.++ ++++|+|++++.. +.+.+++.+ +...+ .
T Consensus 3 ~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~-~~~~~----~ 74 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI--SNLPKQFLELGDR-PILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDK-YLPLY----K 74 (236)
T ss_dssp EEEEEEEC-------------CGGGSEETTE-EHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHH-HCGGG----G
T ss_pred eEEEEeCCccccccCC--CCCCCeeeeeCCc-cHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHh-ccccc----c
Confidence 7999999999999997 6789999999987 9999999999998 5999999999877 556666654 22101 0
Q ss_pred CCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhh--c--CcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEEe
Q 009971 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEE--H--NVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALP 241 (521)
Q Consensus 168 ~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~--~--~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~~ 241 (521)
..+.... .. .|+.++++.++..+.. . ..+.+++++||+ ++. .++.++++.|.+.++ ++++.+
T Consensus 75 -~~~~~~~-----~~----~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~~~~ 142 (236)
T 2vsh_A 75 -ERIIITK-----GG----ADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDTVVE 142 (236)
T ss_dssp -GGEEEEE-----CC----SSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEEEEE
T ss_pred -CceEEEC-----CC----CchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEEEEe
Confidence 0122211 11 5788999999887742 1 236799999999 555 579999999987654 244444
Q ss_pred cCcccCcceeEEEeCCCC-CeEEeeeCCChhhhhhcccccccccCCchhhccCCceee-EEEEEEeHHHHHHHHhhhCCC
Q 009971 242 MDEKRATAFGLMKIDEEG-RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIAS-MGIYVISKDVMLNLLRDKFPG 319 (521)
Q Consensus 242 ~~~~~~~~~g~v~~d~~g-rV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~GIyifs~~vl~~ll~~~~~~ 319 (521)
..+ + +..+++| ++..+.+++. +.. ...|+|+++.+.++++....
T Consensus 143 ~~~--~-----~~~~~~g~~~~~~~~~~~--------------------------~~~~~~p~~f~~~~l~~~~~~~~~- 188 (236)
T 2vsh_A 143 AVD--T-----IVESTNGQFITDIPNRAH--------------------------LYQGQTPQTFRCKDFMDLYGSLSD- 188 (236)
T ss_dssp CCS--C-----EEECSSSSBCCBCCCGGG--------------------------EEEEEEEEEEEHHHHHHHHHTCCH-
T ss_pred ccc--c-----EEEeCCCCeeeeecChHH--------------------------heeecCCcEecHHHHHHHHHHHHh-
Confidence 332 2 2224567 7777766531 211 23789999888766653211
Q ss_pred CCCh-hhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhcc
Q 009971 320 ANDF-GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGIT 364 (521)
Q Consensus 320 ~~d~-~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll 364 (521)
...+ ..+.+..+...+.++..+..+++|.||+||+||..|+..+.
T Consensus 189 ~g~~~~~~~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~~~ 234 (236)
T 2vsh_A 189 EEKEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMIE 234 (236)
T ss_dssp HHHHHCCSHHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHHTC
T ss_pred cCCCcCCCHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHhh
Confidence 1111 23444555555778999998889999999999999987553
No 33
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.83 E-value=3.9e-20 Score=178.07 Aligned_cols=221 Identities=13% Similarity=0.084 Sum_probs=144.8
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhC-CCceEEEEecCChHHHHHHHHHhhhccCCCC
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNS-NISKIYVLTQFNSASLNRHLSRAYASNMGGY 165 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~-gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~ 165 (521)
|+++.|||||||.|+||+ ..+||+|+|++|+ |||+|+++++.++ ++++|+|++++..+.+.+++...+.
T Consensus 2 ~~~~~aiIlAaG~g~R~~---~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~~~~------ 71 (228)
T 2yc3_A 2 EKSVSVILLAGGQGKRMK---MSMPKQYIPLLGQ-PIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESID------ 71 (228)
T ss_dssp TTCEEEEEECCCCC----------CGGGSEETTE-EHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTTTSS------
T ss_pred CcceEEEEECCccccccC---CCCCccEeEECCE-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHHhCC------
Confidence 457999999999999998 3579999999987 9999999999998 8999999999887666665543211
Q ss_pred cCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEEecC
Q 009971 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMD 243 (521)
Q Consensus 166 ~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~~~~ 243 (521)
. .+.++.. + .|..++++.++..++. ..+.++++.||. ++. .++..+++.|.+.++ ++++.+..
T Consensus 72 --~-~v~~~~~-----~----~~~~~sv~~al~~~~~-~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~--~i~~~~~~ 136 (228)
T 2yc3_A 72 --V-DLSFAIP-----G----KERQDSVYSGLQEIDV-NSELVCIHDSARPLVNTEDVEKVLKDGSAVGA--AVLGVPAK 136 (228)
T ss_dssp --S-EEEEECC-----C----SSHHHHHHHHHTTSCT-TCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE--EEEEEECC
T ss_pred --C-cEEEECC-----C----CCHHHHHHHHHHhhcc-CCCEEEEecCCCccCCHHHHHHHHHHHHhcCc--eEEEEecc
Confidence 0 1333321 1 5788999999877753 246789999998 555 569999999877654 44444432
Q ss_pred cccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCCh
Q 009971 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (521)
Q Consensus 244 ~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~ 323 (521)
+ .+..+|+++.+..+.+++. ..... ..|+|+++.+.+.++..... ..+
T Consensus 137 ~------~~~~~~~~~~v~~~~~~~~------------------------~~~~~-~~~~f~~~~l~~~~~~~~~~-~~~ 184 (228)
T 2yc3_A 137 A------TIKEVNSDSLVVKTLDRKT------------------------LWEMQ-TPQVIKPELLKKGFELVKSE-GLE 184 (228)
T ss_dssp S------CCCCBCTTSCBCCCCSCCC------------------------CEEEE-EEEEECHHHHHHHHHHHHHH-TCC
T ss_pred c------eEEEEcCCCceEEecCccc------------------------eEEEe-CCcEEEHHHHHHHHHHHHhc-CCC
Confidence 2 1112344455543322211 11333 48999987766555421111 122
Q ss_pred hhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhcc
Q 009971 324 GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGIT 364 (521)
Q Consensus 324 ~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll 364 (521)
..+.+..+.+.+.++..+..+..|+||+||+||..|+..+.
T Consensus 185 ~~~~~~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l~ 225 (228)
T 2yc3_A 185 VTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILS 225 (228)
T ss_dssp CCSTTHHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHHT
T ss_pred cccHHHHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHHh
Confidence 45666666666888876666667999999999999987654
No 34
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.83 E-value=3.3e-19 Score=171.85 Aligned_cols=217 Identities=14% Similarity=0.143 Sum_probs=136.7
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCC-CceEEEEecCChHHHHHHHHHhhhccCCCCc
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (521)
++|.|||||||.|+||++ ..||+|+|++|+ |||+|+++.+.+++ +++|+|++++..+.+.+ +.+ +..
T Consensus 5 ~~~~aiIlA~G~g~R~~~---~~~K~l~~~~gk-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~-~~~------ 72 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGA---DKPKQYVEIGSK-TVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQT-AFP------ 72 (231)
T ss_dssp CCEEEEEECC-------------CCSCCEETTE-EHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHH-HCT------
T ss_pred CceEEEEEcccccccCCC---CCCceEeEECCe-EHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHh-cCC------
Confidence 468999999999999996 579999999986 99999999999985 99999999987766666 543 110
Q ss_pred CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhc----CcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEE
Q 009971 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEH----NVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAAL 240 (521)
Q Consensus 167 ~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~----~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~ 240 (521)
..+.++. . ..|++++++.++..+... ..+.+++++||. +.+ ..+.++++.|.+.+... +++.
T Consensus 73 --~~i~~~~-----~----~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~~~-~~~~ 140 (231)
T 1vgw_A 73 --QVRVWKN-----G----GQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGG-ILAV 140 (231)
T ss_dssp --TSEEECC-----C----CSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTCE-EEEE
T ss_pred --CceEEEc-----C----CCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCeE-EEEe
Confidence 1134331 1 168999999998777421 247899999998 555 45999999887654233 3344
Q ss_pred ecCcccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCC
Q 009971 241 PMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGA 320 (521)
Q Consensus 241 ~~~~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~ 320 (521)
+..+ ... .. ++|++....++ . ..+.....|+|+++.+..+++.....
T Consensus 141 ~~~~--~~~----~~-~~g~i~~~~~~---~----------------------~~~~~~~p~~f~~~~l~~~~~~~~~~- 187 (231)
T 1vgw_A 141 PVAD--TLK----RA-ESGQISATVDR---S----------------------GLWQAQTPQLFQAGLLHRALAAENLG- 187 (231)
T ss_dssp ECCS--CEE----EE-SSSBEEEEECC---T----------------------TEEEEEEEEEEEHHHHHHHHHC-----
T ss_pred eccc--ceE----Ee-CCCceEecCCh---H----------------------HheeeeCCcEecHHHHHHHHHHHhhc-
Confidence 4322 111 12 34555543222 1 01222348999998887766532211
Q ss_pred CChhhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhc
Q 009971 321 NDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGI 363 (521)
Q Consensus 321 ~d~~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~l 363 (521)
. .++....+...+.++..+..++.|+|||||+||..|+..+
T Consensus 188 g--~~~~~~~~~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 228 (231)
T 1vgw_A 188 G--ITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLL 228 (231)
T ss_dssp C--CCSHHHHHHTTTCCCEEEECCTTCCCCCSHHHHHHHHHHC
T ss_pred C--CCcHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHH
Confidence 1 1222333333367888888778899999999999998654
No 35
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.83 E-value=1.1e-19 Score=173.99 Aligned_cols=216 Identities=17% Similarity=0.108 Sum_probs=151.6
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCC-CceEEEEecCChH-HHHHHHHHhhhccCCCC
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSA-SLNRHLSRAYASNMGGY 165 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~g-i~~I~Iv~~~~~~-~i~~~l~~~~~~~~~~~ 165 (521)
|+|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++... .+.+++..
T Consensus 1 m~~~~vIlA~G~g~R~~---~~~~K~l~~~~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~--------- 67 (223)
T 2xwl_A 1 MATVAVVPAAGSGERLR---AGRPKAFVTLGGT-PLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG--------- 67 (223)
T ss_dssp -CEEEEEECCCCCGGGT---SSSCGGGSEETTE-EHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTCB---------
T ss_pred CceEEEEECCccCcccC---CCCCCeeeEECCe-EHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhcc---------
Confidence 35899999999999998 4689999999986 99999999999988 9999999987753 34443320
Q ss_pred cCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEEecC
Q 009971 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMD 243 (521)
Q Consensus 166 ~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~~~~ 243 (521)
..+.++... .+.+++++.++..++ ..+.+++++||+ +.+ .++..+++.|. .+.+.++.+.+..
T Consensus 68 ---~~v~~~~~~---------~~~~~~i~~al~~~~--~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~~~~ 132 (223)
T 2xwl_A 68 ---EDSVIVSGG---------VDRTESVALALEAAG--DAEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGLAPA 132 (223)
T ss_dssp ---TTEEEEECC---------SSHHHHHHHHHTTCT--TCSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEECCS
T ss_pred ---CCeEEEcCC---------CCHHHHHHHHHHhcC--CCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEEecc
Confidence 013333211 457889999987762 246789999999 555 46999999883 3445666555543
Q ss_pred cccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCCh
Q 009971 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (521)
Q Consensus 244 ~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~ 323 (521)
+ +..+ .|++|++..+.+++.. ......|+|+++.+..+++... .++
T Consensus 133 d--~~~~----~~~~g~~~~~~e~~~l-------------------------~~~~~p~~f~~~~l~~~~~~~~---~~~ 178 (223)
T 2xwl_A 133 D--TIKA----VDANGAVLGTPERAGL-------------------------RAVQTPQGFHADVLRRAYARAT---AGG 178 (223)
T ss_dssp S--CEEE----ECTTSBEEECCCGGGE-------------------------EEECSCEEEEHHHHHHHHTTCC---SCC
T ss_pred c--ceEE----EcCCCcEEeecChHHh-------------------------eeeeCCcccCHHHHHHHHHHhh---CCC
Confidence 2 2222 3677899888776421 1112357899988776654321 223
Q ss_pred hhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhccc
Q 009971 324 GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITK 365 (521)
Q Consensus 324 ~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~ 365 (521)
..+....+...+.++..+..+++|+|||||+||..|+..+..
T Consensus 179 ~~~~~~~~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 220 (223)
T 2xwl_A 179 VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAH 220 (223)
T ss_dssp CCCHHHHHHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHHHH
T ss_pred CccHHHHHHHcCCCEEEEECCcccccccCHHHHHHHHHHHhh
Confidence 344455555556789999988899999999999999876543
No 36
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.83 E-value=7.4e-21 Score=197.15 Aligned_cols=262 Identities=17% Similarity=0.155 Sum_probs=146.2
Q ss_pred eEEEEeCCeeccc--cHHHHHHHHHhcCCcEEEEEEecCcccCcceeEEEeCC--CCCeEEeeeCCChhhhhhccccccc
Q 009971 207 EFLVLAGDHLYRM--DYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDE--EGRIIEFSEKPKGEQLKAMKVDTTI 282 (521)
Q Consensus 207 ~~Lvl~gD~l~~~--dl~~ll~~h~~~~aditi~~~~~~~~~~~~~g~v~~d~--~grV~~i~ekp~~~~~~~~~~~~~~ 282 (521)
.=|+-.+|++|++ ||.++++.|. .++.. .+++..||+..+++ +++| .|.|||+....
T Consensus 12 ~~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g----~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~--------- 72 (374)
T 2iu8_A 12 SGLVPRGSHMSQSTYSLEQLADFLK-----VEFQG----NGATLLSGVEEIEEAKTAHI-TFLDNEKYAKH--------- 72 (374)
T ss_dssp ---------CCSCCEEHHHHHHHTT-----CEEES----CTTCEECEECCTTTCCTTEE-EECCSSSTHHH---------
T ss_pred cCcccCccccccCcCcHHHHHHhhC-----CEEEC----CCcceEEEEeccccCCCCeE-EEEeCchhhhh---------
Confidence 3467789999997 8999999984 35543 23466789888875 4566 99999985421
Q ss_pred ccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCChhhcchHhhhhCCceEEEEEecceEEec--CCHHHHHHHh
Q 009971 283 LGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDI--GTIEAFYNAN 360 (521)
Q Consensus 283 ~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~~~dil~~li~~~~~I~~~~~~g~w~dI--gt~edy~~An 360 (521)
..+.++|+|+|+++++.++. +| .++++ ++..+ +.++|....+|++. .++.
T Consensus 73 -----------~~~~~aGiyI~~~~~l~~~~--------~~-~~~~p-l~~~~-~~~a~~~~~~~~~~~i~~~~------ 124 (374)
T 2iu8_A 73 -----------LKSSEAGAIIISRTQFQKYR--------DL-NKNFL-ITSES-PSLVFQKCLELFITPVDSGF------ 124 (374)
T ss_dssp -----------HHTCCCSEEEEEHHHHHTST--------TS-CSCEE-EESSC-HHHHHHHHHTTTSCCCCCSC------
T ss_pred -----------hhcCCcEEEEeChhHhhhcc--------cc-ccceE-EEeCC-HHHHHHHHHHHhcccccccc------
Confidence 13678999999998764211 12 45555 54422 33334344445543 2211
Q ss_pred hhcccCCCCCccccccCCCcccCCCCcCCCceee-cccc------c-ceEECCCcEEce-eEEe-eeEECCCCEECCCCE
Q 009971 361 LGITKKPIPDFRYFYDRSAPIYTQPRYLPPSKML-DADV------T-DSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAI 430 (521)
Q Consensus 361 ~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~i------~-~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~ 430 (521)
...+... ++++++.|...+.+.|++.+. ++.| . +++|+++|.|++ |.|. +++|+.++.||++|.
T Consensus 125 -----~~i~~~~-~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~ 198 (374)
T 2iu8_A 125 -----PGIHPTA-VIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVI 198 (374)
T ss_dssp -----CSBCTTC-EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCE
T ss_pred -----CccCCCC-EECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCCCE
Confidence 1112223 666777777777666666654 2222 1 233334444443 4443 344444444444444
Q ss_pred EcceEEECCccccc---cc--------cccccccCCC------c-------ceeeCCCCEEe-eeEECCCCEECCCcEEe
Q 009971 431 IEDTLLMGADYYET---DA--------DRRFLAAKGS------V-------PIGIGKNSHIK-RAIIDKNARIGDNVKIV 485 (521)
Q Consensus 431 I~~s~i~~~~~~e~---~~--------~~~~~~~~~~------~-------~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~ 485 (521)
|+....++.+.+.. +. ...+.||+++ . .+.||+++.|. .+.|++||+||++++|.
T Consensus 199 I~~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~I~~~~~~~t~ig~~~~i~~~v~I~~~v~IG~~~~i~ 278 (374)
T 2iu8_A 199 IQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDRGRFKHSVVREGSKIDNLVQIAHQVEVGQHSMIV 278 (374)
T ss_dssp ECTTCEEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCEEEECSSSCEEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ECCCCEECcCCcccccccCCceeEeeeeccEEECCCCEECCCcEEccCcccceeECCCcEECCccccCCccEECCCCEEc
Confidence 44333222211000 00 0123333333 1 12344444444 46778899999999999
Q ss_pred CCCccCCceeecCCeEEcCCe-----EEECCCCEECCCccC
Q 009971 486 NSDSVQEAARETDGYFIKSGI-----VTIIKDALIPSGTII 521 (521)
Q Consensus 486 ~~~~~~~~~~~~~~~~I~~g~-----v~I~~~~~i~~gsvi 521 (521)
+.+.+...+++|++|+|+.+. ++||++|+|++||+|
T Consensus 279 ~~~~v~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~I~a~s~V 319 (374)
T 2iu8_A 279 AQAGIAGSTKIGNHVIIGGQAGITGHICIADHVIMMAQTGV 319 (374)
T ss_dssp TTCEECTTCEECSSCEECTTCEECSSCEECTTEEECTTCEE
T ss_pred cCcccCCCcEECCCeEEecCcEECCCcccCCCcEEccCcee
Confidence 999998888999999998873 678888888888764
No 37
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.82 E-value=4.2e-19 Score=170.98 Aligned_cols=217 Identities=15% Similarity=0.128 Sum_probs=147.3
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCC-CceEEEEecCChHHHHHHHHHhhhccCCCCc
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (521)
|++.|||||||.|+||+ ||+|+|++|+ |||+|+++.+.+++ +++|+|+++ .+.+.+++.+ +.
T Consensus 3 m~~~aiIlA~G~g~R~~------~K~l~~i~gk-pll~~~l~~~~~~~~~~~ivvv~~--~~~i~~~~~~-~~------- 65 (228)
T 1ezi_A 3 KQNIAVILARQNSKGLP------LKNLRKMNGI-SLLGHTINAAISSKCFDRIIVSTD--GGLIAEEAKN-FG------- 65 (228)
T ss_dssp CEEEEEEECCSSCSSST------TTTTCEETTE-EHHHHHHHHHHHHCCCSEEEEEES--CHHHHHHHHH-TT-------
T ss_pred CceEEEEecCCCCCCCC------CcccceeCCc-CHHHHHHHHHHhCCCCCEEEEECC--CHHHHHHHHH-cC-------
Confidence 46789999999999998 7999999987 99999999999988 899999996 3556666654 21
Q ss_pred CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEEecCc
Q 009971 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMDE 244 (521)
Q Consensus 167 ~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~~~~~ 244 (521)
++++.... .-..+..|++++++.++..++. ..+.+++++||+ +.. .++..+++.|.+.++++++.+.+..+
T Consensus 66 ----~~~~~~~~--~~~~~~~g~~~sv~~~l~~~~~-~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 138 (228)
T 1ezi_A 66 ----VEVVLRPA--ELASDTASSISGVIHALETIGS-NSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEH 138 (228)
T ss_dssp ----CEEEECCC--------CHHHHHHHHHHHHHTC-CSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEECSS
T ss_pred ----CEEEeCch--HHcCCCCChHHHHHHHHHHhCC-CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEecCC
Confidence 12221100 0000126789999999987741 247899999999 444 56999999887777777777776543
Q ss_pred ccCcceeEEEeCCCCCeEEeeeCCCh-hhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCCh
Q 009971 245 KRATAFGLMKIDEEGRIIEFSEKPKG-EQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (521)
Q Consensus 245 ~~~~~~g~v~~d~~grV~~i~ekp~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~ 323 (521)
. +..+ ..+|++|++..+.+.... .... . ....+..+.|+|+++++.+.+.++ +
T Consensus 139 ~-p~~~--~~~~~~g~~~~~~~~~~~~~~~~--------------~-~~~~~~~~~giy~~~~~~l~~~~~--------~ 192 (228)
T 1ezi_A 139 H-PLKT--LLQINNGEYAPMRHLSDLEQPRQ--------------Q-LPQAFRPNGAIYINDTASLIANNC--------F 192 (228)
T ss_dssp C-TTSC--EEECC--CEEESSCHHHHTCCGG--------------G-SCCEEEEEEEEEEEEHHHHHHHTS--------S
T ss_pred C-ccee--eEEcCCCcEeeccccccccCCcc--------------c-CchhheeeeEEEEEeHHHHhhCCc--------c
Confidence 1 2223 333777899888652110 0000 0 001235678999999987653210 1
Q ss_pred hhcchHhhhhCCceEEEEEec-ceEEecCCHHHHHHHhhhcc
Q 009971 324 GSEVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGIT 364 (521)
Q Consensus 324 ~~dil~~li~~~~~I~~~~~~-g~w~dIgt~edy~~An~~ll 364 (521)
.+.++..+..+ ..|.||+||+||..|+..+.
T Consensus 193 ----------~g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l~ 224 (228)
T 1ezi_A 193 ----------FIAPTKLYIMSHQDSIDIDTELDLQQAENILN 224 (228)
T ss_dssp ----------CCSSCEEEECCTGGGCCCCSHHHHHHHHHHHC
T ss_pred ----------cCCceEEEEeCcccccCCCCHHHHHHHHHHHH
Confidence 15677778776 57999999999999987654
No 38
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.80 E-value=3.5e-20 Score=179.43 Aligned_cols=201 Identities=15% Similarity=0.138 Sum_probs=140.3
Q ss_pred cEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcCC
Q 009971 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (521)
Q Consensus 89 ~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (521)
+|.+||||||. |||.+.+...||+|+|++|+ |||+|+++.+.++++ +|+|++.. +.+.+++
T Consensus 2 ~~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~-pll~~~l~~l~~~~~-~ivvv~~~--~~i~~~~-------------- 62 (232)
T 2dpw_A 2 RPSAIVLAGGK-EAWAERFGVGSKALVPYRGR-PMVEWVLEALYAAGL-SPVYVGEN--PGLVPAP-------------- 62 (232)
T ss_dssp CCEEEEECCCB-CSGGGTTTCSBGGGSEETTE-ETHHHHHHHHHHTTC-EEEEESCC--SSCSSCC--------------
T ss_pred ceeEEEECCCC-CccccccCCCCceeeEECCE-EHHHHHHHHHHhcCC-EEEEEeCh--HHHhhhc--------------
Confidence 58999999999 88777666689999999986 999999999999998 88887643 3322211
Q ss_pred CcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe--eccccHHHHHHHHHhcCCcEEEEEEecCccc
Q 009971 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH--LYRMDYERFIQAHRETDADITVAALPMDEKR 246 (521)
Q Consensus 169 ~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~--l~~~dl~~ll~~h~~~~aditi~~~~~~~~~ 246 (521)
.+++ . +..|++++++.++..++ ++|++++||+ +...++..+++ | +.++++++...+.+..
T Consensus 63 -~~~~--~--------~~~g~~~~i~~a~~~~~----~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~~~~~- 124 (232)
T 2dpw_A 63 -ALTL--P--------DRGGLLENLEQALEHVE----GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVPKEAV- 124 (232)
T ss_dssp -SEEE--C--------CCSSHHHHHHHHHHTCC----SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEEHHHH-
T ss_pred -CeEe--c--------CCCCHHHHHHHHHHHcC----CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEeeccch-
Confidence 1333 1 13799999999987664 6899999999 44566999998 7 5667777776653211
Q ss_pred CcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhh---h--CCC--
Q 009971 247 ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRD---K--FPG-- 319 (521)
Q Consensus 247 ~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~---~--~~~-- 319 (521)
...|+.+ .++|+.+.||| .+++|+|+|+++++..+.+. . ...
T Consensus 125 ~~~~~~~----~~~v~~~~ek~---------------------------~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~P 173 (232)
T 2dpw_A 125 EARFPRT----KRTYARLREGT---------------------------FTGGNLLLLDKSLFRKALPLARRVVALRKRP 173 (232)
T ss_dssp HHHCTTC----CCCCEEETTEE---------------------------EEECSEEEEEHHHHTTTHHHHHHHHHTTTCH
T ss_pred hhhCCCc----ceeEEEEecCc---------------------------eeeeeEEEEcHHHHHHHHHHHHHHHHhccCH
Confidence 1233321 24577766653 57899999999887544321 0 000
Q ss_pred -----------------CCChhhcchHhhhh-CCceEEEEEec--ceEEecCCHHHHH
Q 009971 320 -----------------ANDFGSEVIPGATS-IGMRVQAYLYD--GYWEDIGTIEAFY 357 (521)
Q Consensus 320 -----------------~~d~~~dil~~li~-~~~~I~~~~~~--g~w~dIgt~edy~ 357 (521)
.....+++++.+.. .+.++..+.++ +.|.|||||+||.
T Consensus 174 ~~~~~~~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 174 LALARLVGWDVLLKLLLGRLSLAEVEARAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp HHHHHHHCHHHHHHHHHTCCCHHHHHHHHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred HHHHHHHCHHHHHHHHhccCCHHHHHHHHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 12234677765542 36789999884 5799999999984
No 39
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.79 E-value=1.2e-17 Score=176.05 Aligned_cols=340 Identities=11% Similarity=0.075 Sum_probs=201.1
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecC-CCcchhHHHHHHhHhC----C--CceEEEEecCChHHHHHHHHHhhhc
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLG-ANYRLIDIPVSNCLNS----N--ISKIYVLTQFNSASLNRHLSRAYAS 160 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~-G~~pLI~~~l~~l~~~----g--i~~I~Iv~~~~~~~i~~~l~~~~~~ 160 (521)
.++.+||||||.||||+ ...||+|+|+. |+ |+|+++++++... | |.-+++...+..+.+.+||++...+
T Consensus 78 ~k~~vviLAGGlGTRLg---~~~PK~llpv~~gk-p~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~~~f 153 (469)
T 2icy_A 78 DKLVVLKLNGGLGTTMG---CTGPKSVIEVRDGL-TFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNS 153 (469)
T ss_dssp TTEEEEEEECCBSGGGT---CCSBGGGSEEETTE-EHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGGTTS
T ss_pred ccceEEEEcCCccccCC---CCCCccccccCCCC-CHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhcccC
Confidence 57999999999999996 68999999998 65 9999999999876 5 5544555555588999999885333
Q ss_pred cCCCCcCCCcEEEeeccc-------------CC---C-CCCCCCChHHHHHHH-----HHHhhhcCcceEEEEeCCeecc
Q 009971 161 NMGGYKNEGFVEVLAAQQ-------------SP---E-NPNWFQGTADAVRQY-----LWLFEEHNVLEFLVLAGDHLYR 218 (521)
Q Consensus 161 ~~~~~~~~~~v~vl~~~q-------------~~---~-~~~~~~Gt~~al~~~-----~~~l~~~~~~~~Lvl~gD~l~~ 218 (521)
++ . +.++.... ++ . ....+.||++.+... ++.+.....++++++++|.+..
T Consensus 154 G~------~-I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~ 226 (469)
T 2icy_A 154 NV------D-IHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGA 226 (469)
T ss_dssp SS------C-EEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTC
T ss_pred Cc------e-EEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCc
Confidence 32 1 22211100 00 0 011368999988764 2222222358999999999887
Q ss_pred ccHHHHHHHHHhcCCcEEEEEEecCcccCcceeEEEe-CCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCcee
Q 009971 219 MDYERFIQAHRETDADITVAALPMDEKRATAFGLMKI-DEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIA 297 (521)
Q Consensus 219 ~dl~~ll~~h~~~~aditi~~~~~~~~~~~~~g~v~~-d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 297 (521)
.....++.+|.++++++++.+.+.... ...+|++.. |...+++++.|+|.......- + .....+.
T Consensus 227 ~~d~~ll~~~~~~~a~~t~~v~~k~~~-~~~~Gvl~~~dg~~~vvE~~e~p~~~~~e~k--~-----------~~~~~~~ 292 (469)
T 2icy_A 227 IVDLTILKHLIQNKNEYCMEVTPKTLA-DVKGGTLISYEGKVQLLEIAQVPDEHVNEFK--S-----------IEKFKIF 292 (469)
T ss_dssp CCCHHHHHHHHHHTCSEEEEEEECCTT-CCSSCEEEEETTEEEEECGGGSCGGGHHHHH--S-----------SSSCCEE
T ss_pred ccCHHHHHHHHHcCCCeeEEEEEeccC-CCceeEEEEECCEEEEEEEeccChhhhhhhc--c-----------cccccee
Confidence 543479999999999999988876531 246888775 322347777788765321100 0 0123477
Q ss_pred eEEEEEEeHHHHHHHHhhhCCCC-----------------CChhhcchHhhhhCCceEEEEEe-cceEEecCCHHHHHHH
Q 009971 298 SMGIYVISKDVMLNLLRDKFPGA-----------------NDFGSEVIPGATSIGMRVQAYLY-DGYWEDIGTIEAFYNA 359 (521)
Q Consensus 298 ~~GIyifs~~vl~~ll~~~~~~~-----------------~d~~~dil~~li~~~~~I~~~~~-~g~w~dIgt~edy~~A 359 (521)
++|+|+|++++++++++...... +.+.-|+++.. .+..++.+ ..+|..+.+..+|+.+
T Consensus 293 N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~~~----~~~~~~~V~R~~F~PvKn~~dll~~ 368 (469)
T 2icy_A 293 NTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFF----DNAIGVNVPRSRFLPVKASSDLLLV 368 (469)
T ss_dssp EEEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGGS----TTCEEEECCGGGCCBCCSHHHHHHH
T ss_pred eEEEEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHHhc----CCeEEEEechhHcCcCCCHHHHHHH
Confidence 99999999999988876421100 11222333322 23455555 3579999999999999
Q ss_pred hhhcccCCCCCccccccCC--CcccCCCCcCCCceeecccccc--eEECCCcEEceeEEeeeEECCCCEECCCCEEcceE
Q 009971 360 NLGITKKPIPDFRYFYDRS--APIYTQPRYLPPSKMLDADVTD--SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTL 435 (521)
Q Consensus 360 n~~ll~~~~~~~~~~~~~~--~~i~~~~~~~~~~~i~~~~i~~--~~Ig~~~~I~~~~I~~s~ig~~~~Ig~~~~I~~s~ 435 (521)
...+-......+ ..++. .++.+...+.+ . -.+|.+ ...-.-..|-+ ..+-.|--+++.|.++++.+.+
T Consensus 369 ~s~l~~~~~g~~--~~~~~~~~~~~P~v~l~~-~---~~~v~~f~~rf~~~p~~~~--~~~l~v~gdv~fg~~v~l~G~v 440 (469)
T 2icy_A 369 QSDLYTLVDGFV--TRNKARTNPSNPSIELGP-E---FKKVATFLSRFKSIPSIVE--LDSLKVSGDVWFGSSIVLKGKV 440 (469)
T ss_dssp HSTTEEEETTEE--EECTTCCSSSCCEEEECG-G---GCSHHHHHHTBSSCCBCTT--EEEEEEESEEEECSSCEEEEEE
T ss_pred HHHHHHHhcCcE--EecCcccCCCCCeEEcCh-h---hhhHHHHHHhcCCCccccc--CCeEEEEeeeEEcCCcEEEEEE
Confidence 887322111100 11111 11111111111 1 111211 11111111111 1233445556777778887777
Q ss_pred EECCccccccccccccccCCCcceeeCCCCEEeeeEECCCCEE
Q 009971 436 LMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARI 478 (521)
Q Consensus 436 i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~I 478 (521)
++.++ ..-++.|.+++++++.+|..|.+|
T Consensus 441 ~i~~~--------------~~~~~~ip~g~~l~~~~~~~~~~~ 469 (469)
T 2icy_A 441 TVAAK--------------SGVKLEIPDRAVVENKNINGPEDL 469 (469)
T ss_dssp EEECC--------------TTCEEEECTTCEEESCEECCC---
T ss_pred EEEcC--------------CCCeeecCCCCEeecceeeccCCC
Confidence 66541 112467888999988888776654
No 40
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.78 E-value=4.6e-18 Score=164.57 Aligned_cols=222 Identities=12% Similarity=0.150 Sum_probs=143.9
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCC-CceEEEEecCChHHHHHHHHHhhhccCCCC
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSASLNRHLSRAYASNMGGY 165 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~ 165 (521)
|++|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++..+.+.+ +.. +.
T Consensus 5 ~~~~~~iIlA~G~g~R~~---~~~~K~l~~i~g~-pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~-~~------ 72 (236)
T 1i52_A 5 HLDVCAVVPAAGFGRRMQ---TECPKQYLSIGNQ-TILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPL-AN------ 72 (236)
T ss_dssp CCCEEEEEEECCCCGGGC---CSSCGGGSEETTE-EHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGG-GG------
T ss_pred CCceeEEEECCcCccccC---CCCCcceeeECCE-EHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHh-cC------
Confidence 467999999999999998 4579999999986 99999999999887 89999999876655544 322 11
Q ss_pred cCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-eccc-cHHHHHHHHHhcCCcEEEEEEecC
Q 009971 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRM-DYERFIQAHRETDADITVAALPMD 243 (521)
Q Consensus 166 ~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~-dl~~ll~~h~~~~aditi~~~~~~ 243 (521)
...+.++.. + .|..++++.++..+++ .+.+++++||+ +.+. .+..+++.+.+.++.. +.+.+..
T Consensus 73 --~~~v~~~~~-----~----~g~~~~i~~al~~~~~--~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~~~~~~ 138 (236)
T 1i52_A 73 --HPQITVVDG-----G----DERADSVLAGLKAAGD--AQWVLVHDAARPCLHQDDLARLLALSETSRTGG-ILAAPVR 138 (236)
T ss_dssp --CTTEEEEEC-----C----SSHHHHHHHHHHTSTT--CSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EEEEECC
T ss_pred --CCCEEEECC-----C----CCHHHHHHHHHHhcCC--CCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EEEEecc
Confidence 112433321 1 4788999998877642 47899999999 5554 5889998876655333 3333322
Q ss_pred cccCcceeEEEeCCC-CCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCC
Q 009971 244 EKRATAFGLMKIDEE-GRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAND 322 (521)
Q Consensus 244 ~~~~~~~g~v~~d~~-grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d 322 (521)
+ . + ...+++ |++....+.. .-+..-+.++|+++.+..+++........
T Consensus 139 ~--~--~--~~~~~~~~~i~~~~~~~-------------------------~i~~~~~p~~f~~~~l~~~~~~~~~~g~~ 187 (236)
T 1i52_A 139 D--T--M--KRAEPGKNAIAHTVDRN-------------------------GLWHALTPQFFPRELLHDCLTRALNEGAT 187 (236)
T ss_dssp S--C--E--EEECTTSSSEEEEECCT-------------------------TCEEEEEEEEEEHHHHHHHHHHHHHTTCC
T ss_pred c--c--E--EEEcCCCCceeeccChH-------------------------hheeeeCCceecHHHHHHHHHHHHhcCCC
Confidence 1 1 1 112444 4554332110 01222256788887776665432111111
Q ss_pred hhhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhcccC
Q 009971 323 FGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKK 366 (521)
Q Consensus 323 ~~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~~ 366 (521)
.++....+...+.++..+..++.|+||+||+||..|+..+..+
T Consensus 188 -~td~~~~~~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~~~ 230 (236)
T 1i52_A 188 -ITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRT 230 (236)
T ss_dssp -CCSHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHCC-
T ss_pred -cccHHHHHHHcCCCEEEEecCccccccCCHHHHHHHHHHHHHh
Confidence 2222333333467888888888899999999999998876544
No 41
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.74 E-value=1.6e-17 Score=160.33 Aligned_cols=216 Identities=13% Similarity=0.155 Sum_probs=137.0
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCC-CceEEEEecCChHHHHHHHHHhhhccCCCCc
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (521)
|++.|||||||.|+||. +|+|+|++|+ |||+|+++.+.+++ +++|+|++ +.+.+.+++.+ +.
T Consensus 2 ~~~~aiIlA~G~s~R~~------~K~l~~i~Gk-pli~~~i~~~~~~~~~~~ivv~~--~~~~i~~~~~~-~g------- 64 (229)
T 1qwj_A 2 PHLAALVLARGGSKGIP------LKNIKRLAGV-PLIGWVLRAALDAGVFQSVWVST--DHDEIENVAKQ-FG------- 64 (229)
T ss_dssp CCEEEEEECCSCCSSSS------CTTTSEETTE-EHHHHHHHHHHHHTCCSEEEEEE--SCHHHHHHHHH-TT-------
T ss_pred CcEEEEEEcCCCCCCCC------CcccceECCE-EHHHHHHHHHHhCCCcCEEEEEC--ChHHHHHHHHH-cC-------
Confidence 46899999999999995 4999999987 99999999999988 69999999 35667777654 11
Q ss_pred CCCcEEEee-cccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEEecC
Q 009971 167 NEGFVEVLA-AQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMD 243 (521)
Q Consensus 167 ~~~~v~vl~-~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~~~~ 243 (521)
++++. ......+ ..+..+++..++..+. ..+.+++++||. +.+ .++..+++.|.+.+++.++.+.+..
T Consensus 65 ----~~~~~~~~~~~~~---~~~~~~~v~~al~~~~--~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~~~~ 135 (229)
T 1qwj_A 65 ----AQVHRRSSETSKD---SSTSLDAIVEFLNYHN--EVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRRH 135 (229)
T ss_dssp ----CEEEECCGGGSST---TCCHHHHHHHHHTTCT--TCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEEC
T ss_pred ----CEEEeChhhhcCC---CCcHHHHHHHHHHhcC--CCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEeecc
Confidence 22221 1100001 1344588888887663 247899999999 554 5699999999888777655544322
Q ss_pred cccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCCh
Q 009971 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (521)
Q Consensus 244 ~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~ 323 (521)
++..+++ .| + +..|.+++......+ ..++ .....+..++|+|+|+++.| +.
T Consensus 136 --~p~~~~v--~~--~-~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~n~giY~~~~~~l---~~--------- 186 (229)
T 1qwj_A 136 --QFRWSEI--QK--G-VREVTEPLNLNPAKR---------PRRQ-DWDGELYENGSFYFAKRHLI---EM--------- 186 (229)
T ss_dssp --CCEECCC--CS--S-TTCCCCBSSSBTTBC---------CCTT-TSCCEEEEEEEEEEEEHHHH---HT---------
T ss_pred --ChhHhhc--cc--c-ccccccccccccccc---------cCCC-CCCceEEEeeEEEEEEHHHh---cc---------
Confidence 2333322 22 2 111221110000000 0000 00012477999999999877 11
Q ss_pred hhcchHhhhhCCceEEEEEec-ceEEecCCHHHHHHHhhhccc
Q 009971 324 GSEVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGITK 365 (521)
Q Consensus 324 ~~dil~~li~~~~~I~~~~~~-g~w~dIgt~edy~~An~~ll~ 365 (521)
.+. .+..+..+..+ ++|.||||++||..|+..+..
T Consensus 187 ------~~~-~g~~~~~~~~~~~~~~dIdt~~Dl~~a~~~~~~ 222 (229)
T 1qwj_A 187 ------GYL-QGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVLR 222 (229)
T ss_dssp ------TCS-SCSSEEEEECCGGGCCCHHHHCSHHHHHHHHHH
T ss_pred ------ccc-cCCeEEEEECCcccccCCCCHHHHHHHHHHHHH
Confidence 111 25566443555 689999999999999886643
No 42
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.73 E-value=2.1e-17 Score=154.90 Aligned_cols=188 Identities=15% Similarity=0.189 Sum_probs=127.4
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcC
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (521)
++|.+||||||.|+||+ .||+|+|++|+ |||+|+++++.++++++|+|++++..+.+.+++.+ +
T Consensus 4 ~~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~-~--------- 67 (197)
T 2wee_A 4 TQITGVVLAAGRSNRLG-----TPKQLLPYRDT-TVLGATLDVARQAGFDQLILTLGGAASAVRAAMAL-D--------- 67 (197)
T ss_dssp SEEEEEEEECCCCTTTS-----SCGGGSEETTE-EHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCC-T---------
T ss_pred CceEEEEECCCCcccCC-----CCeEcCeeCCc-cHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhcc-C---------
Confidence 46899999999999995 79999999986 99999999999999999999999887777666543 1
Q ss_pred CCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEEecCcc
Q 009971 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMDEK 245 (521)
Q Consensus 168 ~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~~~~~~ 245 (521)
+ ++++.. +.|..|++++++.++..+.. ..+.+++++||+ +.+ .++.++++. +.++++++...
T Consensus 68 -~-~~~~~~------~~~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i~~~~~----- 131 (197)
T 2wee_A 68 -G-TDVVVV------EDVERGCAASLRVALARVHP-RATGIVLMLGDQPQVAPATLRRIIDV--GPATEIMVCRY----- 131 (197)
T ss_dssp -T-SEEEEC------C----CCHHHHHHHHTTSCT-TEEEEEEEETTCTTCCHHHHHHHHHH--GGGSSEEEEEE-----
T ss_pred -C-CEEEEC------CCcccCHHHHHHHHHHHhcc-cCCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCEEEEec-----
Confidence 1 233321 12337999999999877631 247899999999 554 558888887 44444432211
Q ss_pred cCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCChhh
Q 009971 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGS 325 (521)
Q Consensus 246 ~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~~~ 325 (521)
+ |+ +. .-++|+++.+..+.. .. .+.
T Consensus 132 ----------~--g~-------~~------------------------------~P~~~~~~~l~~l~~--~~--~~~-- 156 (197)
T 2wee_A 132 ----------A--DG-------VG------------------------------HPFWFSRTVFGELAR--LH--GDK-- 156 (197)
T ss_dssp ----------T--TE-------EE------------------------------EEEEEEGGGHHHHHT--CC--STT--
T ss_pred ----------C--CC-------cC------------------------------CCEEECHHHHHHHHh--CC--CCh--
Confidence 1 11 00 002677777765542 21 111
Q ss_pred cchHhhhh-CCceEEEEEec-ceEEecCCHHHHHHHhhhc
Q 009971 326 EVIPGATS-IGMRVQAYLYD-GYWEDIGTIEAFYNANLGI 363 (521)
Q Consensus 326 dil~~li~-~~~~I~~~~~~-g~w~dIgt~edy~~An~~l 363 (521)
-+..+++ .+.++..+..+ +.|.||+||+||..++..+
T Consensus 157 -~~~~~l~~~~~~v~~v~~~~~~~~dIdtpeDl~~~~~~~ 195 (197)
T 2wee_A 157 -GVWKLVHSGRHPVRELAVDGCVPLDVDTWDDYRRLLESV 195 (197)
T ss_dssp -HHHHHHHCTTSCEEEEECSSCCCCCCSSHHHHHHHHTC-
T ss_pred -hHHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHh
Confidence 1233333 24568877774 5899999999999887543
No 43
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.73 E-value=1.6e-16 Score=153.35 Aligned_cols=213 Identities=16% Similarity=0.234 Sum_probs=137.9
Q ss_pred cEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCC-CceEEEEecCChHHH-HHHHHHhhhccCCCCc
Q 009971 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSASL-NRHLSRAYASNMGGYK 166 (521)
Q Consensus 89 ~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~g-i~~I~Iv~~~~~~~i-~~~l~~~~~~~~~~~~ 166 (521)
.|.|||||||.|+||+ ...||+|+|++|+ |||+|+++++.+++ +++|+|++++....+ .+++. +
T Consensus 13 ~~~aiILAaG~s~Rm~---~~~~K~l~~i~Gk-pli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~~----~------ 78 (234)
T 1vpa_A 13 MNVAILLAAGKGERMS---ENVPKQFLEIEGR-MLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVF----H------ 78 (234)
T ss_dssp CEEEEEEECCCCGGGC---CSSCGGGCEETTE-ETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTCC----C------
T ss_pred cCeEEEEcCcchhhcC---CCCCceEEEECCe-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHhc----c------
Confidence 5899999999999998 3579999999987 99999999999988 999999998765432 22211 0
Q ss_pred CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEEecCc
Q 009971 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMDE 244 (521)
Q Consensus 167 ~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~~~~~ 244 (521)
.. .+... . .+ .+..++++.++..+++...+.+++++||. +.+ ..+..+++.+.+.++ .+.+.+..+
T Consensus 79 ~~-~~~~~---~--gg----~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~~--~i~~~~~~~ 146 (234)
T 1vpa_A 79 EK-VLGIV---E--GG----DTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGA--ATLALKNSD 146 (234)
T ss_dssp TT-EEEEE---E--CC----SSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHSE--EEEEEECCS
T ss_pred CC-ceEEe---C--CC----CcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC--EEEEEecCC
Confidence 11 12111 0 00 23778899988777431235788899999 655 459999998876543 333333321
Q ss_pred ccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCChh
Q 009971 245 KRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFG 324 (521)
Q Consensus 245 ~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~~ 324 (521)
++..++++| + .+.++.. .+..-..++|+++.+.+++... .+.
T Consensus 147 ------~~~~~~~~g-v-~~~~r~~-------------------------~~~~~~p~~f~~~~l~~~~~~~-----~~~ 188 (234)
T 1vpa_A 147 ------ALVRVENDR-I-EYIPRKG-------------------------VYRILTPQAFSYEILKKAHENG-----GEW 188 (234)
T ss_dssp ------EEEEEETTE-E-EEECCTT-------------------------EEEEEEEEEEEHHHHHHHHTTC-----CCC
T ss_pred ------cEEEECCCC-c-ccCChhH-------------------------eeeecCCccccHHHHHHHHHhc-----CCC
Confidence 122234556 5 5544310 0111234588988887666531 112
Q ss_pred hcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhccc
Q 009971 325 SEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITK 365 (521)
Q Consensus 325 ~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~ 365 (521)
.+....+...+.++..+..++.|.||+||+||..|+..+..
T Consensus 189 ~~~~~~~~~~g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 229 (234)
T 1vpa_A 189 ADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIARE 229 (234)
T ss_dssp SSSHHHHHTTTCCCEEEECCGGGCCCCSTTHHHHHHHHHHH
T ss_pred CcHHHHHHHcCCcEEEEECCchhcCCCCHHHHHHHHHHHhc
Confidence 23333333346678777777789999999999999876543
No 44
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.73 E-value=3e-16 Score=151.58 Aligned_cols=217 Identities=19% Similarity=0.185 Sum_probs=153.2
Q ss_pred cEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCC-CceEEEEecCCh-HHHHHHHHHhhhccCCCCc
Q 009971 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNS-ASLNRHLSRAYASNMGGYK 166 (521)
Q Consensus 89 ~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~g-i~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~~ 166 (521)
++.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++.. +.+.+++.. .
T Consensus 7 ~~~aIIlAaG~g~Rmg---~~~~K~l~~l~Gk-pll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~--~------- 73 (231)
T 3q80_A 7 EVVAIVPAAGSGERLA---VGVPKAFYQLDGQ-TLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH--R------- 73 (231)
T ss_dssp CEEEEEECCCCCTTTC---SSSCGGGCEETTE-EHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG--G-------
T ss_pred ceEEEEECCCCCccCC---CCCCceEEEECCe-EHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC--C-------
Confidence 4899999999999998 3689999999987 99999999999875 999999998766 455555432 0
Q ss_pred CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhc-CcceEEEEeCCe-eccc-cHHHHHHHHHhcCCcEEEEEEecC
Q 009971 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEH-NVLEFLVLAGDH-LYRM-DYERFIQAHRETDADITVAALPMD 243 (521)
Q Consensus 167 ~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~-~~~~~Lvl~gD~-l~~~-dl~~ll~~h~~~~aditi~~~~~~ 243 (521)
+.++... .+..++++.++..+++. ..+.+|++.||. +.+. .+..+++.+.+ +.+..+...+..
T Consensus 74 ----v~~v~gg---------~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~~p~~ 139 (231)
T 3q80_A 74 ----AMIVAGG---------SNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPVLPLS 139 (231)
T ss_dssp ----CEEEECC---------SSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEEECCS
T ss_pred ----eEEEcCC---------CchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEEEecc
Confidence 2333211 23468999999877532 246899999999 6654 48999998865 245556666654
Q ss_pred cccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCC-CCC
Q 009971 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG-AND 322 (521)
Q Consensus 244 ~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~-~~d 322 (521)
+ +.. ..+++|+|....+. ... +.+.+ -+.|+.+.|.+.++....+ ...
T Consensus 140 d--t~~----~~~~~g~v~~~~~r---~~l---------------------~~~qT-Pq~F~~~~L~~a~~~~~~~n~~~ 188 (231)
T 3q80_A 140 D--TIK----AVDANGVVLGTPER---AGL---------------------RAVQT-PQGFTTDLLLRSYQRGSLDLPAA 188 (231)
T ss_dssp S--CEE----EECTTSBEEECCCG---GGE---------------------EEECS-CEEEEHHHHHHHHHHHTC-----
T ss_pred C--CEE----EEcCCCcEEEecch---hhe---------------------EEEcC-CcEEEHHHHHHHHHHHHhhcCCC
Confidence 3 222 24667887766432 111 13344 5899998888777653321 123
Q ss_pred hhhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhc
Q 009971 323 FGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGI 363 (521)
Q Consensus 323 ~~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~l 363 (521)
+.+|....+...|.++..++-+..++.|+||+|+..|+..+
T Consensus 189 ~~TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 189 EYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp CCSSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred CCCcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 45777777777799999888877799999999999998754
No 45
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.72 E-value=5.6e-16 Score=164.33 Aligned_cols=337 Identities=14% Similarity=0.113 Sum_probs=196.0
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecC-CCcchhHHHHHHhHhC----CCc-eEEEEec-CChHHHHHHHHHhhh
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLG-ANYRLIDIPVSNCLNS----NIS-KIYVLTQ-FNSASLNRHLSRAYA 159 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~-G~~pLI~~~l~~l~~~----gi~-~I~Iv~~-~~~~~i~~~l~~~~~ 159 (521)
..++.+||||||.||||+ ...||+|+||+ |+ |||+|+++.+... |+. .++|+++ +..+.+.+||.+...
T Consensus 90 ~~k~avViLAGG~GTRmg---s~~PK~l~~V~~gk-~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~~~ 165 (488)
T 2i5k_A 90 LSKLAVLKLNGGLGTSMG---CVGPKSVIEVREGN-TFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSA 165 (488)
T ss_dssp GGGEEEEEECCCBSGGGT---CCSBSTTSCCBTTB-CHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGGCS
T ss_pred cCCceEEEEcCCCcccCC---CCCCccccccCCCC-cHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhccc
Confidence 457999999999999998 57999999998 76 9999999999876 533 3666666 777999999987322
Q ss_pred ccCCCCcCCCcEEEeecccC---------------CC---CC-CCCCChHHHHHHH-----HHHhhhcCcceEEEEeCCe
Q 009971 160 SNMGGYKNEGFVEVLAAQQS---------------PE---NP-NWFQGTADAVRQY-----LWLFEEHNVLEFLVLAGDH 215 (521)
Q Consensus 160 ~~~~~~~~~~~v~vl~~~q~---------------~~---~~-~~~~Gt~~al~~~-----~~~l~~~~~~~~Lvl~gD~ 215 (521)
+++ . +.++ .|. +. .. ..+.||++++... ++.+.....++++|++||.
T Consensus 166 fg~------~-i~~f--~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDn 236 (488)
T 2i5k_A 166 NRI------R-IRSF--NQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDN 236 (488)
T ss_dssp SSC------E-EEEE--CCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTB
T ss_pred cCc------e-EEEE--EeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCc
Confidence 221 1 2211 121 00 01 1368999999733 3444333468999999999
Q ss_pred ecc-ccHHHHHHHHHhcCCcEEEEEEecCcccCcceeEEEeCCCCC--eEEeeeCCChhhhhhcccccccccCCchhhcc
Q 009971 216 LYR-MDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGR--IIEFSEKPKGEQLKAMKVDTTILGLDDERAKE 292 (521)
Q Consensus 216 l~~-~dl~~ll~~h~~~~aditi~~~~~~~~~~~~~g~v~~d~~gr--V~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~ 292 (521)
|.. .|+. ++..|.++++++++.+.+.++. ...||.+..+ +|+ |+++.+.+....... . + ..
T Consensus 237 L~~~~d~~-~L~~~~~~~a~~t~~v~~~~~p-~~~yG~Iv~~-dG~~~iVE~~e~~~e~~~~~-~--------~----~~ 300 (488)
T 2i5k_A 237 LGATVDLK-ILNHMIETGAEYIMELTDKTRA-DVKGGTLISY-DGQVRLLEVAQVPKEHIDEF-K--------N----IR 300 (488)
T ss_dssp SSCCCCHH-HHHHHHHSCCSEEEEEEECCGG-GSSSCEEEEE-TTEEEEECGGGSCTTSHHHH-T--------C----TT
T ss_pred CCCcccHH-HHHHHHhcCCcEEEEEEEecCC-CCceeEEEEE-CCcEEEEEeccCCHHHHhhc-c--------c----cc
Confidence 876 5775 6688989999999988865431 2348887664 454 555555554322100 0 0 01
Q ss_pred CCceeeEEEEEEeHHHHHHHHhhhCCCC---------------------CChhhcchHhhhhCCceEEEEEec-ceEEec
Q 009971 293 MPYIASMGIYVISKDVMLNLLRDKFPGA---------------------NDFGSEVIPGATSIGMRVQAYLYD-GYWEDI 350 (521)
Q Consensus 293 ~~~l~~~GIyifs~~vl~~ll~~~~~~~---------------------~d~~~dil~~li~~~~~I~~~~~~-g~w~dI 350 (521)
.....++|+|+|+.+.|.+++....... +.|..|+++.+ + +..++.++ ..|.-+
T Consensus 301 ~~~~~Ntgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~-~---~~~~~~V~R~~F~Pv 376 (488)
T 2i5k_A 301 KFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF-D---GAHGVVVPRSRFLPV 376 (488)
T ss_dssp TCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC-----CEECCBCCGGGGGGGS-S---SCEEEEECGGGCCBC
T ss_pred ccCEEEEEEEEEeHHHHHHHHhhccCCCcceecCccccCCCCCCceEEeeehhhhHHhhc-c---CceEEEecccccccc
Confidence 1246799999999999988877421100 11222333332 1 23344442 357788
Q ss_pred CCHHHHHHHhhhcccCCCCCccccccCC-CcccCCCCcCCCceeecccccc--eEECCCcEEceeEEeeeEECCCCEECC
Q 009971 351 GTIEAFYNANLGITKKPIPDFRYFYDRS-APIYTQPRYLPPSKMLDADVTD--SVIGEGCVIKNCKIHHSVVGLRSCISE 427 (521)
Q Consensus 351 gt~edy~~An~~ll~~~~~~~~~~~~~~-~~i~~~~~~~~~~~i~~~~i~~--~~Ig~~~~I~~~~I~~s~ig~~~~Ig~ 427 (521)
-+..+++.+...+-...... . ..++. .++.+...+.+. ..++.+ ..+.....|-++ .+-+|--+++.|.
T Consensus 377 Kn~~~ll~~~~~~~~~~~g~-~-~~~~~~~e~~P~v~~~~~----~~~~~~~~~rf~~~p~i~~~--~~l~v~Gdv~fg~ 448 (488)
T 2i5k_A 377 KTCSDLLLVKSDLFRLEHGS-L-KLDPSRFGPNPLIKLGSH----FKKVSGFNARIPHIPKIVEL--DHLTITGNVFLGK 448 (488)
T ss_dssp CSHHHHHHHTSTTEEEETTE-E-EECTTCCSSCCEEEECGG----GSSHHHHHHHCSSCCBCTTE--EEEEEESSEEECT
T ss_pred cCCccHHHHHHHHHHHhcCc-E-eecCCcCCCCCeEEECCc----ccchhhHHhhcCCCcccccc--ceEEEEeeeEEcC
Confidence 88888766665432111000 0 11111 111111111111 111111 111111112211 2335555577778
Q ss_pred CCEEcceEEECCccccccccccccccCCCcceeeCCCCEEeeeEECCCCEE
Q 009971 428 GAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARI 478 (521)
Q Consensus 428 ~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~I 478 (521)
++.+.+.+++.++ +|. ++.|.++++++|.+|..|.+|
T Consensus 449 ~v~l~G~v~i~a~-------------~~~-~~~ip~g~~l~n~~~~~~~~~ 485 (488)
T 2i5k_A 449 DVTLRGTVIIVCS-------------DGH-KIDIPNGSILENVVVTGNLQI 485 (488)
T ss_dssp TCEEEEEEEEECC-------------TTC-CEEECTTCEEEEEEEEEEEEE
T ss_pred CcEEEEEEEEEcC-------------CCC-eEEeCCCCEEecceeeccccc
Confidence 8888777766531 122 467888889988887766665
No 46
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.72 E-value=1.9e-16 Score=148.52 Aligned_cols=188 Identities=16% Similarity=0.194 Sum_probs=130.4
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcC
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (521)
+++.+||||||.|+||+ .||+|+|++|+ |||+|+++.+.++++++|+|++++..+.+.+++.+ +
T Consensus 4 ~~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~-~--------- 67 (199)
T 2waw_A 4 SRVTGVVLAAGYSRRLG-----TPKQLLPLGDT-TLLGATLAMARRCPFDQLIVTLGGAADEVLEKVEL-D--------- 67 (199)
T ss_dssp CCEEEEEEESSCCTTTT-----SCGGGCEETTE-EHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCC-T---------
T ss_pred CceEEEEECCCCCCCCC-----CCEEeCEeCcc-CHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc-C---------
Confidence 45899999999999997 69999999986 99999999999999999999999877777666543 1
Q ss_pred CCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ec-cccHHHHHHHHHhcCCcEEEEEEecCcc
Q 009971 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LY-RMDYERFIQAHRETDADITVAALPMDEK 245 (521)
Q Consensus 168 ~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~-~~dl~~ll~~h~~~~aditi~~~~~~~~ 245 (521)
+ +.++.. +.+..|++++++.++..++. ..+.+++++||+ +. ..++.++++. +.++++++...
T Consensus 68 -~-~~~~~~------~~~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~----- 131 (199)
T 2waw_A 68 -G-LDIVLV------DDAGLGCSSSLKSALTWVDP-TAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY----- 131 (199)
T ss_dssp -T-SEEEEC------CCCCTTCCCHHHHHHHTSCT-TCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE-----
T ss_pred -C-CEEEEC------CCcccCHHHHHHHHHHhhhc-cCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec-----
Confidence 1 233321 11237889999999887731 247899999999 33 4568888887 44555433221
Q ss_pred cCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCChhh
Q 009971 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGS 325 (521)
Q Consensus 246 ~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~~~ 325 (521)
+ ++ +. .-++|+++.+..+.. .. .+..
T Consensus 132 ----------~--g~-------~~------------------------------~P~~~~~~~l~~~~~--~~--~~~~- 157 (199)
T 2waw_A 132 ----------A--NG-------IG------------------------------HPFWVSRGVFGDLAE--LH--GDKG- 157 (199)
T ss_dssp ----------T--TE-------EE------------------------------EEEEEEGGGHHHHHT--CS--STTC-
T ss_pred ----------C--Cc-------cc------------------------------CCEEEcHHHHHHHHh--cC--CCHH-
Confidence 1 10 00 012678877775543 11 1111
Q ss_pred cchHhhhh-CCceEEEEEec-ceEEecCCHHHHHHHhhhc
Q 009971 326 EVIPGATS-IGMRVQAYLYD-GYWEDIGTIEAFYNANLGI 363 (521)
Q Consensus 326 dil~~li~-~~~~I~~~~~~-g~w~dIgt~edy~~An~~l 363 (521)
+..+++ .+.++..+..+ +.|.|||||+||..++..+
T Consensus 158 --~~~~l~~~~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~ 195 (199)
T 2waw_A 158 --VWRLIESGRHGVRRIRVDADVPLDVDTWDDYERLLASV 195 (199)
T ss_dssp --HHHHHHSSSSCEEEEECSSCCCCCCSSHHHHHHHHHHH
T ss_pred --HHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHH
Confidence 223333 24578888874 5899999999999988754
No 47
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.71 E-value=2.2e-17 Score=155.01 Aligned_cols=129 Identities=23% Similarity=0.336 Sum_probs=93.5
Q ss_pred EEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcCCC
Q 009971 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEG 169 (521)
Q Consensus 90 ~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 169 (521)
|+|||||||.|+||+| .||+|+|++|+ |||+|+++++.++++++|+|+++++.+.+.+++.+.+.+. .
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~-pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~~~~-------~ 68 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGR-CLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAYKDY-------K 68 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTE-EHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHTTTT-------T
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCE-EHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhccCC-------C
Confidence 5899999999999997 89999999987 9999999999999999999999998889999998754321 1
Q ss_pred cEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ec-cccHHHHHHHHHh-----cCCcEEEEEEec
Q 009971 170 FVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LY-RMDYERFIQAHRE-----TDADITVAALPM 242 (521)
Q Consensus 170 ~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~-~~dl~~ll~~h~~-----~~aditi~~~~~ 242 (521)
.+.++... ..|++++++.++..+ .+.+++++||+ +. ..++.++++.|.+ .+.+..+.+.+.
T Consensus 69 ~~~~~~~~--------~~g~~~si~~al~~~----~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p~ 136 (196)
T 3rsb_A 69 NIVVIDTS--------GKGYIEDLNECIGYF----SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIPK 136 (196)
T ss_dssp EEEE----------------CCCCCTTTTTC----SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEEET
T ss_pred CEEEEECC--------CCCcHHHHHHHHHhC----CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEEEc
Confidence 13333211 267778888877655 47899999999 44 4669999999987 556666666553
No 48
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.71 E-value=7.9e-17 Score=156.18 Aligned_cols=208 Identities=13% Similarity=0.016 Sum_probs=128.9
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcC
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (521)
|++.|||||||.|+||++ . ||+|+|++|+ |||+|+++. ..++++|+|++++ .+.+ +..
T Consensus 24 M~~~aiILAgG~s~Rm~~---~-~K~l~~i~gk-pli~~~l~~--~~~~~~ivvv~~~---~~~~-~~~----------- 81 (236)
T 2px7_A 24 MEVSVLIPAAGNGLRLGR---G-PKAFLQVGGR-TLLEWTLAA--FRDAAEVLVALPP---GAEP-PKG----------- 81 (236)
T ss_dssp CCCEEEEECCC----------C-CGGGCBCSSS-BHHHHHHHH--TTTCSEEEEEECT---TCCC-CTT-----------
T ss_pred CceEEEEEcCCCCccCCC---C-CCeEEEECCE-EHHHHHHHh--cCCCCeEEEEeCH---HHHH-hhc-----------
Confidence 357799999999999984 3 9999999987 999999999 6689999999975 1111 111
Q ss_pred CCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEEecCcc
Q 009971 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMDEK 245 (521)
Q Consensus 168 ~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~~~~~~ 245 (521)
..++++.. . .|..++++.++..++ .+.+|+++||+ +++ ..+..+++.+.+.++ .+.+.+..+
T Consensus 82 -~~v~~~~~-----~----~~~~~~i~~al~~~~---~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~i~~~~~~~- 145 (236)
T 2px7_A 82 -LGAVFLEG-----G----ATRQASVARLLEAAS---LPLVLVHDVARPFVSRGLVARVLEAAQRSGA--AVPVLPVPD- 145 (236)
T ss_dssp -CSCEEEEC-----C----SSHHHHHHHHHHHCC---SSEEEECCTTCCCCCHHHHHHHHHHHHHHSE--EEEEEECCS-
T ss_pred -CCcEEEeC-----C----CchHHHHHHHHHHcC---CCeEEEecCccccCCHHHHHHHHHHHHhcCC--eEEEEecCC-
Confidence 01333321 1 467889999887764 46899999998 555 458999998876543 333333321
Q ss_pred cCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCChhh
Q 009971 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGS 325 (521)
Q Consensus 246 ~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~~~ 325 (521)
... ..+ +|++..+.++.. .+... ..++|+++.+.++++....... ...
T Consensus 146 -~~~----~~~-~G~v~~~~~~~~------------------------~~~~~-~~~~f~~~~l~~~~~~~~~~g~-~~~ 193 (236)
T 2px7_A 146 -TLM----APE-GEAYGRVVPREA------------------------FRLVQ-TPQGFFTALLREAHAYARRKGL-EAS 193 (236)
T ss_dssp -EEE----EEC-SSSCEEEECGGG------------------------CEEEC-SCEEEEHHHHHHHHHHHHHHTC-CCS
T ss_pred -cEE----Eec-CCeEEecCChHh------------------------hcccc-CCeEEcHHHHHHHHHHHHhcCC-Cch
Confidence 111 124 678776644211 01222 2567888877655543211111 112
Q ss_pred cchHhhhhCCceEEEEEecceEEecCCHHHHHHHhhhccc
Q 009971 326 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITK 365 (521)
Q Consensus 326 dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An~~ll~ 365 (521)
+....+...+.++..+..++.|.|||||+||..|+..+..
T Consensus 194 d~~~ll~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 233 (236)
T 2px7_A 194 DDAQLVQALGYPVALVEGEATAFKITHPQDLVLAEALARV 233 (236)
T ss_dssp SHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHTC
T ss_pred hHHHHHHHcCCcEEEEECCccccCCCCHHHHHHHHHHHHh
Confidence 3333333336678888888889999999999999876644
No 49
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.65 E-value=3.5e-16 Score=147.39 Aligned_cols=184 Identities=18% Similarity=0.240 Sum_probs=115.1
Q ss_pred cEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcCC
Q 009971 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (521)
Q Consensus 89 ~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (521)
+|.+||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +++|++++..+.+.+++. .
T Consensus 2 ~~~~iIlAgG~g~Rmg-----~~K~l~~i~g~-pll~~~l~~l~~~---~ivvv~~~~~~~~~~~~~------------~ 60 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFG-----GDKLLAKIDNT-PIIMRTIRIYGDL---EKIIIVGKYVNEMLPLLM------------D 60 (197)
T ss_dssp CEEEEEECSCCTTCCC-----SSGGGSBSSSS-BHHHHHHHHTTTS---BCCEEECTTHHHHGGGCT------------T
T ss_pred ceEEEEECCcCcccCC-----CCeeeCEeCce-EHHHHHHHHHHhC---CEEEEECCCHHHHHHHhc------------C
Confidence 4899999999999998 39999999987 9999999999887 888999877554443322 1
Q ss_pred CcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-eccc-cHHHHHHHHHhcCCcEEEEEEecCccc
Q 009971 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRM-DYERFIQAHRETDADITVAALPMDEKR 246 (521)
Q Consensus 169 ~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~-dl~~ll~~h~~~~aditi~~~~~~~~~ 246 (521)
+ + ++. ++.|..|++++++.++..+++ .+.+++++||+ +.+. .+.++++.+ +.++++++...
T Consensus 61 ~-~-~v~------~~~~~~G~~~si~~al~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~------ 123 (197)
T 3d5n_A 61 Q-I-VIY------NPFWNEGISTSLKLGLRFFKD--YDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPTH------ 123 (197)
T ss_dssp S-C-EEE------CTTGGGCHHHHHHHHHHHTTT--SSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEEE------
T ss_pred C-E-EEE------CCCCCCCHHHHHHHHHHhhcc--CCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEEe------
Confidence 1 2 221 123447999999999987753 36899999999 6554 488888876 44555433221
Q ss_pred CcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCChhhc
Q 009971 247 ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSE 326 (521)
Q Consensus 247 ~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~~~d 326 (521)
+ |+ +.. + .+|+++.+..+.. .... .+
T Consensus 124 ---------~--g~-------~~~-----------------------P-------~~~~~~~l~~l~~--l~g~----~~ 149 (197)
T 3d5n_A 124 ---------K--GE-------RGN-----------------------P-------VLISKSLFNEIEK--LRGD----VG 149 (197)
T ss_dssp ---------T--TE-------ECS-----------------------C-------EEEEHHHHHHHHH--CCTT----CC
T ss_pred ---------C--Cc-------ccC-----------------------C-------EEECHHHHHHHHc--cCCC----cc
Confidence 0 10 000 1 1788888876553 2211 12
Q ss_pred chHhhhhCCceEEEEEec--ceEEecCCHHHHHHHhhhcc
Q 009971 327 VIPGATSIGMRVQAYLYD--GYWEDIGTIEAFYNANLGIT 364 (521)
Q Consensus 327 il~~li~~~~~I~~~~~~--g~w~dIgt~edy~~An~~ll 364 (521)
+-..+.+.+.++..+..+ +.|.||+||+||..++..+.
T Consensus 150 ~~~~l~~~~~~v~~v~~~~~~~~~dIdTpeDl~~~~~~~~ 189 (197)
T 3d5n_A 150 ARVILNKIKIEELCFIECSEGVLIDIDKKEDLMRLRDFHP 189 (197)
T ss_dssp THHHHTTSCGGGEEEEECCGGGTCCTTTC-----------
T ss_pred HHHHHHhCccCeEEEEcCCCCcccCCCCHHHHHHHHHhhc
Confidence 222222224456667764 46899999999988876543
No 50
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.63 E-value=4.1e-16 Score=147.35 Aligned_cols=180 Identities=12% Similarity=0.062 Sum_probs=112.9
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCc
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (521)
++++.+||||||.|+||+ .||+|+|++|+ |||+|+++.+.++ +++|+|++++... +++. +
T Consensus 12 ~~~~~~iILA~G~g~Rmg-----~~K~ll~i~g~-pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~~-----~----- 71 (201)
T 2e8b_A 12 SKVNTCYVLAGGKSKRFG-----EDKLLYEIKGK-KVIERVYETAKSV-FKEVYIVAKDREK---FSFL-----N----- 71 (201)
T ss_dssp CSCCEEEEEEESSCCCCS-----TTHHHHHHHHH-HHHHHHHHHHHTT-CSEEEEEESCSGG---GGGG-----T-----
T ss_pred ccCceEEEECCCCCccCC-----CCcccceECce-EHHHHHHHHHHHh-CCEEEEEeCcHHH---hhcC-----C-----
Confidence 345799999999999998 79999999986 9999999999998 9999999987654 1111 1
Q ss_pred CCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecccc-HHH-HHHHHHhcCCcEEEEEEecC
Q 009971 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRMD-YER-FIQAHRETDADITVAALPMD 243 (521)
Q Consensus 167 ~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~d-l~~-ll~~h~~~~aditi~~~~~~ 243 (521)
++++.. +.+..|++++++.++..++ .+.+++++||+ +.+.+ +.. ++ +.++++.
T Consensus 72 ----~~~v~~------~~~~~g~~~~i~~al~~~~---~~~~lv~~~D~P~i~~~~i~~~l~------~~~~~v~----- 127 (201)
T 2e8b_A 72 ----APVVLD------EFEESASIIGLYTALKHAK---EENVFVLSGDLPLMKKETVLYVLE------NFKEPVS----- 127 (201)
T ss_dssp ----CCEEEC------CCSSCCHHHHHHHHHHHCS---SSEEEEEETTCTTCCHHHHHHHHH------TCCSSEE-----
T ss_pred ----ceEEec------CCCCCCcHHHHHHHHHHcC---CCCEEEEeCCcCcCCHHHHHHHHh------cCCEEEE-----
Confidence 223321 1234799999999987764 47899999999 44544 666 65 1222110
Q ss_pred cccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeEEEEEEeHHHHHHHHhhhCCCCCCh
Q 009971 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (521)
Q Consensus 244 ~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~d~ 323 (521)
.. +|+ ....+|+| |+++++..+.+....+ ...
T Consensus 128 ----------~~--~g~----------------------------------~~p~~giy-~~~~~~~~l~~~~~~g-~~~ 159 (201)
T 2e8b_A 128 ----------VA--KTE----------------------------------KLHTLVGV-YSKKLLEKIEERIKKG-DYR 159 (201)
T ss_dssp ----------EE--ESS----------------------------------SEEEEEEE-EEGGGHHHHHHHHHTT-CCC
T ss_pred ----------ec--CCc----------------------------------eeeEEEEE-eChhHHHHHHHHHHcC-Cch
Confidence 00 010 14568999 9998776443211111 112
Q ss_pred hhcchHhhhhCCceEEEEEec--ceEE--ecCCHHHHHHHhhhc
Q 009971 324 GSEVIPGATSIGMRVQAYLYD--GYWE--DIGTIEAFYNANLGI 363 (521)
Q Consensus 324 ~~dil~~li~~~~~I~~~~~~--g~w~--dIgt~edy~~An~~l 363 (521)
..++++. .++..+.++ +.|. |||||+||.+++..+
T Consensus 160 ~~~~l~~-----~~~~~~~~~~~~~~~~~dintpedl~~~~~~~ 198 (201)
T 2e8b_A 160 IWALLKD-----VGYNEVEIPEELRYTLLNMNTKEDLKRILAIE 198 (201)
T ss_dssp HHHHHHH-----HCCEEEECCGGGGGGGCCSCCC----------
T ss_pred HHHHHHH-----CCeEEeccccccchhhcCCCCHHHHHHHHHHh
Confidence 2444443 245566664 5689 999999998887543
No 51
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.57 E-value=1.6e-14 Score=136.43 Aligned_cols=110 Identities=15% Similarity=0.130 Sum_probs=83.9
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCc
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (521)
|+++.+||||||.|+||+ ..||+|+|++|+ |||+|+++.+.. ++++|+|++++..+.+. + .+
T Consensus 4 mm~~~~iILAgG~s~Rmg----~~~K~ll~i~G~-pli~~~l~~l~~-~~~~ivvv~~~~~~~~~----~---~~----- 65 (201)
T 1e5k_A 4 MTTITGVVLAGGKARRMG----GVDKGLLELNGK-PLWQHVADALMT-QLSHVVVNANRHQEIYQ----A---SG----- 65 (201)
T ss_dssp CCSEEEEEECCCCCSSSC----SSCGGGSEETTE-EHHHHHHHHHHH-HCSCEEEECSSSHHHHH----T---TS-----
T ss_pred CCcceEEEEcCCCCCcCC----CCCCceeeECce-eHHHHHHHHHHh-hCCEEEEEcCCcHHHHh----h---cC-----
Confidence 457999999999999998 479999999987 999999999985 58999999987754321 1 11
Q ss_pred CCCcEEEeecccCCCCCCCC-CChHHHHHHHHHHhhhcCcceEEEEeCCe-eccc-cHHHHHHH
Q 009971 167 NEGFVEVLAAQQSPENPNWF-QGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRM-DYERFIQA 227 (521)
Q Consensus 167 ~~~~v~vl~~~q~~~~~~~~-~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~-dl~~ll~~ 227 (521)
++++... .+. .|++++++.++..++ .+.+++++||+ +.+. .+..+++.
T Consensus 66 ----~~~v~~~------~~~~~G~~~si~~~l~~~~---~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 66 ----LKVIEDS------LADYPGPLAGMLSVMQQEA---GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp ----CCEECCC------TTCCCSHHHHHHHHHHHCC---SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred ----CeEEecC------CCCCCCHHHHHHHHHHhCC---CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 2233211 112 689999999988774 47899999999 5554 47888775
No 52
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.57 E-value=9.5e-14 Score=147.87 Aligned_cols=210 Identities=15% Similarity=0.200 Sum_probs=140.6
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceec---CCCcchhHHHHHHhHh--------CC----CceEEEEecCChHHHHH
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPL---GANYRLIDIPVSNCLN--------SN----ISKIYVLTQFNSASLNR 152 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI---~G~~pLI~~~l~~l~~--------~g----i~~I~Iv~~~~~~~i~~ 152 (521)
.+|.+||||||.||||+ ...||+|+|| .|+ |+|+++++.+.. .| +..+++...+..+.+.+
T Consensus 101 ~kvavViLAGG~GTRLg---~~~PK~l~pv~~~~gk-~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~ 176 (505)
T 1jv1_A 101 NKVAVLLLAGGQGTRLG---VAYPKGMYDVGLPSRK-TLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKE 176 (505)
T ss_dssp TCEEEEEECCCCCCTTS---CSSCGGGCCCCCTTCC-CHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHH
T ss_pred CceEEEEEcCCccccCC---CCCCCccceeecCCCC-cHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHH
Confidence 57999999999999996 5799999999 666 999999999876 36 66666666677899999
Q ss_pred HHHHhhhccCCC----CcCCCcEEEeeccc-----CCCC-CCCCCChHHHHHHHHH-----HhhhcCcceEEEEeCCee-
Q 009971 153 HLSRAYASNMGG----YKNEGFVEVLAAQQ-----SPEN-PNWFQGTADAVRQYLW-----LFEEHNVLEFLVLAGDHL- 216 (521)
Q Consensus 153 ~l~~~~~~~~~~----~~~~~~v~vl~~~q-----~~~~-~~~~~Gt~~al~~~~~-----~l~~~~~~~~Lvl~gD~l- 216 (521)
|+++...+++.. ++.+..+..+.... .+.. ...+.||++.+..... .+.....++|+|+++|.+
T Consensus 177 ~f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~L 256 (505)
T 1jv1_A 177 FFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNIL 256 (505)
T ss_dssp HHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBTT
T ss_pred HHHhhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCccc
Confidence 998854443310 01111111110000 0000 1125899998876542 222223589999999995
Q ss_pred ccccHHHHHHHHHhcCCcEEEEEEecCcccCcceeEEEeCCCC--CeEEeeeCCChhhhhhcccccccccCCchhhccCC
Q 009971 217 YRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMP 294 (521)
Q Consensus 217 ~~~dl~~ll~~h~~~~aditi~~~~~~~~~~~~~g~v~~d~~g--rV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (521)
+..+...++..|.++++++++.+.+... ....+|++..+ +| ++++|.|+|...... .+ +. .....
T Consensus 257 ~~~~d~~~lg~~~~~~~~~~~~v~~k~~-~~e~~Gvl~~~-dg~~~vvEy~E~p~~~~~~---~~-------~~-g~~~~ 323 (505)
T 1jv1_A 257 VKVADPRFIGFCIQKGADCGAKVVEKTN-PTEPVGVVCRV-DGVYQVVEYSEISLATAQK---RS-------SD-GRLLF 323 (505)
T ss_dssp CCTTCHHHHHHHHHTTCSEEEEEEECCS-TTCSCCEEEEE-TTEEEEECGGGSCHHHHHC---BC-------TT-SSBSS
T ss_pred cccchHHHHHHHHHcCCCEEEEEEEccC-CccCcceEEEE-CCeEEEEEEeeCCHHHhhh---cc-------cc-ccccc
Confidence 7777778999999999999998876321 34678888774 34 567777777643211 00 00 01123
Q ss_pred ceeeEEEEEEeHHHHHHHHh
Q 009971 295 YIASMGIYVISKDVMLNLLR 314 (521)
Q Consensus 295 ~l~~~GIyifs~~vl~~ll~ 314 (521)
+..++|+|+|+.++++++.+
T Consensus 324 ~~~N~~~~~f~l~~L~~i~~ 343 (505)
T 1jv1_A 324 NAGNIANHFFTVPFLRDVVN 343 (505)
T ss_dssp CEEEEEEEEEEHHHHHHHHH
T ss_pred ceeeEEEEEecHHHHHHHHH
Confidence 58999999999999987765
No 53
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.56 E-value=1.1e-14 Score=149.94 Aligned_cols=198 Identities=17% Similarity=0.182 Sum_probs=129.2
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHh-CCCceEEEEecCChHHHHHHHHHhhhccCCCC
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLN-SNISKIYVLTQFNSASLNRHLSRAYASNMGGY 165 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~-~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~ 165 (521)
||++.+||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+ .++++|+|+++ ..+.+.+++.+
T Consensus 1 Mmki~aIILAaG~ssRmg---~~~pK~ll~l~Gk-PLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~~~--------- 66 (371)
T 1w55_A 1 MSEMSLIMLAAGNSTRFN---TKVKKQFLRLGND-PLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFTKN--------- 66 (371)
T ss_dssp -CCEEEEEECCSCCTTTC---SSSCGGGCEEBTE-EHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTCSS---------
T ss_pred CCccEEEEECCCCCccCC---CCCCcceEEECCe-EHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHhCC---------
Confidence 356899999999999998 3579999999987 999999999998 57999999998 44433322211
Q ss_pred cCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHHHHHhcCCcEEEEEEecC
Q 009971 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMD 243 (521)
Q Consensus 166 ~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~aditi~~~~~~ 243 (521)
++++.. ..|..++++.++..++ .+.+++++||. +.+ ..+.++++.+.+.+ .++.+.+..
T Consensus 67 -----v~~v~~---------g~g~~~sv~~aL~~l~---~d~vlv~~~D~Pli~~~~i~~li~~~~~~~--a~i~~~~~~ 127 (371)
T 1w55_A 67 -----YEFIEG---------GDTRAESLKKALELID---SEFVMVSDVARVLVSKNLFDRLIENLDKAD--CITPALKVA 127 (371)
T ss_dssp -----SEEEEC---------CSSHHHHHHHHHTTCC---SSEEEEEETTCTTCCHHHHHHHHTTGGGCS--EEEEEECCC
T ss_pred -----CEEEeC---------CCChHHHHHHHHHhcC---CCeEEEEeCCcccCCHHHHHHHHHHHHhcC--CEEEEEEee
Confidence 233311 1568899999987664 47899999999 555 45889998876543 344444332
Q ss_pred cccCcceeEEEeCCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCceeeE-EEEEEeHHHHHHHHhhhCCCCCC
Q 009971 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASM-GIYVISKDVMLNLLRDKFPGAND 322 (521)
Q Consensus 244 ~~~~~~~g~v~~d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-GIyifs~~vl~~ll~~~~~~~~d 322 (521)
+ ...+ . .+.+.... +... .-++|+++.+.++++... .
T Consensus 128 d--~vk~----v---------~~t~~r~~-----------------------l~~~~~P~~f~~~~l~~~~~~~~----~ 165 (371)
T 1w55_A 128 D--TTLF----D---------NEALQREK-----------------------IKLIQTPQISKTKLLKKALDQNL----E 165 (371)
T ss_dssp S--CEEE----T---------TEEECGGG-----------------------CCEECSCEEEEHHHHHHHTSSCC----C
T ss_pred c--Ceee----e---------eeecCccc-----------------------eeecCCcceecHHHHHHHHHhcc----c
Confidence 1 1000 0 01111100 1000 124688887766654321 1
Q ss_pred hhhcchHhhhhCCceEEEEEecceEEecCCHHHHHHHh
Q 009971 323 FGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNAN 360 (521)
Q Consensus 323 ~~~dil~~li~~~~~I~~~~~~g~w~dIgt~edy~~An 360 (521)
..+....+...+.++..++.++.|+||+||+||..|+
T Consensus 166 -~td~~~ll~~~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 166 -FTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp -CSSHHHHHHTTTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred -ccCHHHHHHhCCCcEEEEECCccccCCCCHHHHHHHH
Confidence 2232333334467888888778899999999998887
No 54
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.50 E-value=1.3e-13 Score=137.11 Aligned_cols=144 Identities=16% Similarity=0.168 Sum_probs=90.9
Q ss_pred cccCCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEEe-eeEECCCCEECCCCEEc-------------ceEE
Q 009971 374 FYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIE-------------DTLL 436 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~-------------~s~i 436 (521)
++++.+.|.+.+.+.+.+.+. .+.| .++.||++|.|+. +.|. ++.||++|.|+++|.|+ ...|
T Consensus 24 ~I~p~a~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~I 103 (283)
T 4eqy_A 24 RIHPTAIIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVI 103 (283)
T ss_dssp CBCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEEE
T ss_pred ccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEEE
Confidence 566666666666666666665 4444 4688888888886 7777 78999999999888883 2333
Q ss_pred ECCccccccccccccccCCCc----ceeeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCe-----
Q 009971 437 MGADYYETDADRRFLAAKGSV----PIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI----- 506 (521)
Q Consensus 437 ~~~~~~e~~~~~~~~~~~~~~----~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~----- 506 (521)
.++..... .+.|..+.. .+.||+++.|. ++.|++++.||++++|.+...+.++++++++++|+.+.
T Consensus 104 G~~~~Ig~----~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~ 179 (283)
T 4eqy_A 104 GDRNTIRE----FTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQY 179 (283)
T ss_dssp CSSCEECT----TEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred CCCcccCc----ceeEccceecCCCceEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCC
Confidence 33322211 122222111 15666666665 56666666666666666666666666666666666662
Q ss_pred EEECCCCEECCCccC
Q 009971 507 VTIIKDALIPSGTII 521 (521)
Q Consensus 507 v~I~~~~~i~~gsvi 521 (521)
++||++++|++|++|
T Consensus 180 v~Ig~~~vvg~~s~V 194 (283)
T 4eqy_A 180 VRIGAHSMLGGASAL 194 (283)
T ss_dssp CEECTTCEECTTCEE
T ss_pred eEECCCcEECCCCeE
Confidence 567777777777764
No 55
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.50 E-value=2e-13 Score=134.01 Aligned_cols=141 Identities=18% Similarity=0.201 Sum_probs=93.4
Q ss_pred cccCCCcccCCCCcCCCceeecccccceEECCCcEEce-eEEe-eeEECCCCEECCCCEE-------------cceEEEC
Q 009971 374 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAII-------------EDTLLMG 438 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I-------------~~s~i~~ 438 (521)
++++.+.|..++.+.|++.+. .++.||++|+|+. +.|. ++.||++|.|+++|.| ...+.++
T Consensus 8 ~I~~~a~ig~~v~I~~~~~I~----~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG 83 (259)
T 3hsq_A 8 IIDPKAELHESVEVGPYSIIE----GNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIG 83 (259)
T ss_dssp EECTTCEECTTCEECTTCEEC----SSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEEC
T ss_pred EECCCCEECCCCEECCCCEEC----CCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEEC
Confidence 566677777777777776652 4677888888876 7777 5888888888888888 4444444
Q ss_pred CccccccccccccccCCCc---ceeeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCe-----EEE
Q 009971 439 ADYYETDADRRFLAAKGSV---PIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----VTI 509 (521)
Q Consensus 439 ~~~~e~~~~~~~~~~~~~~---~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~-----v~I 509 (521)
++.+- ...+.+..+.. .+.||+++.|. ++.|++++.||+++++.+...+..+++++++++|+.+. ++|
T Consensus 84 ~~~~I---g~~~~I~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~I 160 (259)
T 3hsq_A 84 DHNIF---REYSNIHKGTKEDSPTVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFV 160 (259)
T ss_dssp SSCEE---CTTCEEECCSBTTBCEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECSSEEECTTCEE
T ss_pred CCcEE---CCCCEECCCccCCCcEEECCCcEEcCCcEECCCcEECCccEEcCCceECCccEECCCcEEeCCCEECCCCEE
Confidence 32110 01222221111 35677777776 67778888888888888777777777777777777772 456
Q ss_pred CCCCEECCCccC
Q 009971 510 IKDALIPSGTII 521 (521)
Q Consensus 510 ~~~~~i~~gsvi 521 (521)
|++++|++||+|
T Consensus 161 g~~~~Vg~~s~V 172 (259)
T 3hsq_A 161 GDYSMVAGLAKV 172 (259)
T ss_dssp CTTCEECSSEEE
T ss_pred CCCCEECCCCEE
Confidence 777777777654
No 56
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.49 E-value=4.3e-13 Score=137.74 Aligned_cols=61 Identities=13% Similarity=0.211 Sum_probs=39.5
Q ss_pred eeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCe-----EEECCCCEECCCcc
Q 009971 460 GIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----VTIIKDALIPSGTI 520 (521)
Q Consensus 460 ~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~-----v~I~~~~~i~~gsv 520 (521)
.||+++.|. ++.|+++++||++|+|.....+...++||++|+|+.+. ++|+++++|+++++
T Consensus 229 ~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~s~V~~~~~Ig~~~vv~g~s~ 295 (357)
T 4e79_A 229 ILEDGVIIDNLVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAGHLSIADNVTLTGMSM 295 (357)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSEEECTTCE
T ss_pred cccCCcccCCCcccCCCeEECCCCEECCCCEECCCcEECCCCEECcCCEECCCeEECCCCEEeecCE
Confidence 445555554 45666677777777777777777777788888887772 34555555555554
No 57
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.49 E-value=4.8e-13 Score=136.59 Aligned_cols=61 Identities=18% Similarity=0.203 Sum_probs=39.7
Q ss_pred eeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCe-----EEECCCCEECCCcc
Q 009971 460 GIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----VTIIKDALIPSGTI 520 (521)
Q Consensus 460 ~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~-----v~I~~~~~i~~gsv 520 (521)
.||+++.|. ++.|++++.||++|+|.....+.+..+||++++|+.+. ++|+++++|+++++
T Consensus 224 ~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~~~i~g~v~IG~~~~Ig~~s~V~~~v~Ig~~~vv~a~s~ 290 (341)
T 3eh0_A 224 IIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGM 290 (341)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECSSEEECTTCE
T ss_pred EeccceEECCCCEEeCCcEECCCCEECCCCEECCCcEECCCcEEcCCCEECCCCEECCCCEEeeCCE
Confidence 344444444 45666677777777777777777777777777777763 45666666666665
No 58
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.48 E-value=5.9e-13 Score=141.03 Aligned_cols=259 Identities=15% Similarity=0.102 Sum_probs=161.3
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecC-CCcchhHHHHHHhHhCCCc-----eEEEEec-CChHHHHHHHH-Hhhh
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLG-ANYRLIDIPVSNCLNSNIS-----KIYVLTQ-FNSASLNRHLS-RAYA 159 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~-G~~pLI~~~l~~l~~~gi~-----~I~Iv~~-~~~~~i~~~l~-~~~~ 159 (521)
.++.+||||||.||||+ ...||+|+||+ |+ |+|+++++++...+.. .++|.+. +..+.+.+||+ +...
T Consensus 74 ~k~avViLAGGlGTRLg---~~~PK~llpV~~gk-~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~ 149 (505)
T 2oeg_A 74 QSTVVLKLNGGLGTGMG---LCDAKTLLEVKDGK-TFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPW 149 (505)
T ss_dssp HTEEEEEEECCCCGGGT---CCSCGGGSEEETTE-EHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHH
T ss_pred hcceEEEEcCCcccccC---CCCCCcccccCCCC-cHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhc
Confidence 47999999999999999 67999999998 76 9999999999886533 4555554 55789999998 6433
Q ss_pred ccCC----CCcCCCcEEEeeccc-C---CC----CCCCCCChHHHHHHH-----HHHhhhcCcceEEEEeCCeecc-ccH
Q 009971 160 SNMG----GYKNEGFVEVLAAQQ-S---PE----NPNWFQGTADAVRQY-----LWLFEEHNVLEFLVLAGDHLYR-MDY 221 (521)
Q Consensus 160 ~~~~----~~~~~~~v~vl~~~q-~---~~----~~~~~~Gt~~al~~~-----~~~l~~~~~~~~Lvl~gD~l~~-~dl 221 (521)
|++. ..|.++.+..+.... . .+ ....+.||++.+... ++.+.....++++++++|.+.. .|+
T Consensus 150 fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~ 229 (505)
T 2oeg_A 150 LYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK 229 (505)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH
T ss_pred cCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH
Confidence 4331 112222222222111 0 00 011257999988755 3333222457999999999874 577
Q ss_pred HHHHHHHHhcCCcEEEEEEecCcccCcceeEEEeC------CCCC---------eEEeeeCCChhhhhhcccccccccCC
Q 009971 222 ERFIQAHRETDADITVAALPMDEKRATAFGLMKID------EEGR---------IIEFSEKPKGEQLKAMKVDTTILGLD 286 (521)
Q Consensus 222 ~~ll~~h~~~~aditi~~~~~~~~~~~~~g~v~~d------~~gr---------V~~i~ekp~~~~~~~~~~~~~~~~~~ 286 (521)
.++..|.++++++++.+.+.... ...+|++..+ .+|+ ++++.+-|....... +
T Consensus 230 -~llg~~~~~~ad~~~~v~~k~~~-d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~----~------ 297 (505)
T 2oeg_A 230 -RVLAYMEKEKIDFLMEVCRRTES-DKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESF----Q------ 297 (505)
T ss_dssp -HHHHHHHHHTCSEEEEEEECCTT-CCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHH----H------
T ss_pred -HHHHHHHhcCCcEEEEEEEecCC-ccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhcc----c------
Confidence 89999999999999998876542 2467887762 4567 666666655432210 0
Q ss_pred chhhccCCceeeEEEEEEeHHHHHHHHhhh-----CCC-----CCC-----h-----hhcchHhhhhCCceEEEEEec-c
Q 009971 287 DERAKEMPYIASMGIYVISKDVMLNLLRDK-----FPG-----AND-----F-----GSEVIPGATSIGMRVQAYLYD-G 345 (521)
Q Consensus 287 ~~~~~~~~~l~~~GIyifs~~vl~~ll~~~-----~~~-----~~d-----~-----~~dil~~li~~~~~I~~~~~~-g 345 (521)
......+.++...+|+-+.+.++++.. .+. .-+ . .+-.+..+++.-.+..++.++ .
T Consensus 298 ---g~~~f~~~Ninn~~~~l~~l~~~~~~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~~~~~~~~V~R~ 374 (505)
T 2oeg_A 298 ---DINKYSFFNTNNLWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMFESASAIVVPRS 374 (505)
T ss_dssp ---CTTTTCEEEEEEEEEEHHHHHHHHHHTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSCTTCEEEECCGG
T ss_pred ---CccccCeeEEEEEEEEHHHHHHHHhhhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhcCcceEEEeccc
Confidence 001123589999999999988877651 110 000 0 011112222211234444443 2
Q ss_pred eEEecCCHHHHHHHhhhccc
Q 009971 346 YWEDIGTIEAFYNANLGITK 365 (521)
Q Consensus 346 ~w~dIgt~edy~~An~~ll~ 365 (521)
.|.-+-+..++..+...+..
T Consensus 375 ~FsPvKn~~dl~~~~sdly~ 394 (505)
T 2oeg_A 375 RFAPVKTCADLLALRSDAYV 394 (505)
T ss_dssp GCCCCSSHHHHHHHHSTTEE
T ss_pred eeecccCCCCHHHHHHHHHh
Confidence 47778888888877776553
No 59
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.48 E-value=3e-13 Score=133.63 Aligned_cols=140 Identities=16% Similarity=0.165 Sum_probs=90.2
Q ss_pred cccCCCcccCCCCcCCCceeecccccceEECCCcEEce-eEEe-eeEECCCCEECCCCEEc-------------ceEEEC
Q 009971 374 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIE-------------DTLLMG 438 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~-------------~s~i~~ 438 (521)
++++.+.|..++.+.|.+.+. .++.||++|+|+. |.|. ++.||++|.|+++|.|+ ...|.+
T Consensus 9 ~I~~~a~Ig~~~~Ig~~~~I~----~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~ 84 (270)
T 1j2z_A 9 IISPKAEINKGVEIGEFCVIG----DGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGE 84 (270)
T ss_dssp EECTTSEECTTCEECTTCEEC----TTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECS
T ss_pred EECCCCEECCCCEECCCCEEC----CCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECC
Confidence 334444444444444444432 4788899999987 8887 89999999999999984 223333
Q ss_pred CccccccccccccccCCC----cceeeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCe-----EE
Q 009971 439 ADYYETDADRRFLAAKGS----VPIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----VT 508 (521)
Q Consensus 439 ~~~~e~~~~~~~~~~~~~----~~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~-----v~ 508 (521)
+.... ..+.+..+. -.+.||+++.|. ++.|++++.||++++|.+...+..+++++++++|+.+. ++
T Consensus 85 ~~~I~----~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~ 160 (270)
T 1j2z_A 85 DNLIR----EFCMINPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVR 160 (270)
T ss_dssp SCEEC----TTCEECCCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCE
T ss_pred CCEEC----CCeEEcCCeecCCccEEECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCCEECCCcE
Confidence 22221 112222221 126778888775 67777777888887777777777777777777777663 66
Q ss_pred ECCCCEECCCccC
Q 009971 509 IIKDALIPSGTII 521 (521)
Q Consensus 509 I~~~~~i~~gsvi 521 (521)
||++|+|++||+|
T Consensus 161 IG~~a~Ig~~s~V 173 (270)
T 1j2z_A 161 IAKGCMIAGKSAL 173 (270)
T ss_dssp ECTTCEECTTCEE
T ss_pred eCCceEEecCcEe
Confidence 7788888887764
No 60
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.48 E-value=6.7e-13 Score=136.96 Aligned_cols=61 Identities=18% Similarity=0.394 Sum_probs=42.1
Q ss_pred eeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCe-----EEECCCCEECCCcc
Q 009971 460 GIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----VTIIKDALIPSGTI 520 (521)
Q Consensus 460 ~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~-----v~I~~~~~i~~gsv 520 (521)
.||+++.|. ++.|++++.||++|+|.+...+...++||++|+|+.+. ++||++++|+++++
T Consensus 246 ~IG~~~~I~~~v~I~~~v~IG~~~~I~~~~~I~~~v~IG~~~~Ig~~a~V~~~v~Ig~~~vI~a~s~ 312 (372)
T 3pmo_A 246 LIGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGLVGHIEICDNVFVTGMTM 312 (372)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECSSEEECTTCE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCeEEeCCCEECCCCEECCCCEEeeCCE
Confidence 455555554 56666777777777777777777778888888888773 34566666666654
No 61
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.48 E-value=9.5e-13 Score=124.96 Aligned_cols=115 Identities=19% Similarity=0.201 Sum_probs=84.5
Q ss_pred EEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHHHHHHHHhhhccCCCCcCCC
Q 009971 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEG 169 (521)
Q Consensus 90 ~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 169 (521)
|.|||||||.|+||+ .||+|+|++|+ |||+|+++.+... +|+|++++ .+.+. .+.+.+ +
T Consensus 1 m~aiILAgG~s~Rmg-----~~K~ll~~~G~-pli~~~~~~l~~~---~vvvv~~~-~~~~~-~~~~~~--------~-- 59 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG-----MEKTEVMLCGK-KLIEWVLEKYSPF---QTVFVCRD-EKQAE-KLSSRY--------E-- 59 (208)
T ss_dssp CEEEEECCCCCTTTT-----SCGGGCEETTE-EHHHHHHHHHTTS---EEEEECSS-HHHHH-HHHTTS--------C--
T ss_pred CEEEEECCCchhhCC-----CCCcccEECCe-eHHHHHHHHhcCC---CEEEEECC-HHHHH-HHHHhc--------C--
Confidence 689999999999997 79999999987 9999999999987 89999864 33333 332211 1
Q ss_pred cEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecccc-HHHHHHHHHhcCCcEEE
Q 009971 170 FVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRMD-YERFIQAHRETDADITV 237 (521)
Q Consensus 170 ~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~d-l~~ll~~h~~~~aditi 237 (521)
++++... .+..|...+++.++..+ .+.+ +++||+ +.+.+ +..+++.+.+.+.++++
T Consensus 60 -~~~v~d~------~~~~G~~~si~~gl~~~----~~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 60 -AEFIWDL------HKGVGSIAGIHAALRHF----GSCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp -SCEECCT------TCCCSHHHHHHHHHHHH----SSEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred -CeEEecC------CCCCChHHHHHHHHHHc----CCCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 2233211 12368889999998776 2578 999999 66655 88898888765666543
No 62
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.46 E-value=2.5e-13 Score=132.42 Aligned_cols=154 Identities=16% Similarity=0.236 Sum_probs=103.1
Q ss_pred HHHhhhcccCCC-CCccccccCCCcccCCCCcCCCceeecccccceEECCCcEEce-eEEee-----eEECCCCEECCCC
Q 009971 357 YNANLGITKKPI-PDFRYFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHH-----SVVGLRSCISEGA 429 (521)
Q Consensus 357 ~~An~~ll~~~~-~~~~~~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~~-----s~ig~~~~Ig~~~ 429 (521)
.++|..++.+.. ..+. +++....+...+.+.|++.+. .++.||++|.|+. |.|.. ++||++|.|+++|
T Consensus 38 ~~~~~~~~~~~p~~~~~-~~~~~~~I~~~~~I~~~a~I~----g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~ 112 (247)
T 1qre_A 38 TVDEFSNIRENPVTPWN-PEPSAPVIDPTAYIDPQASVI----GEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGV 112 (247)
T ss_dssp CCCCCCSEECCCCBTTB-SSCCCCEECTTCEECTTCEEE----ESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTC
T ss_pred hhhhhhhccCCCCcccc-ccCCCcEECCCcEECCCCEEe----CCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCe
Confidence 345556544321 1244 566677788888888888763 4667777777776 66663 3899999999999
Q ss_pred EEcceEEE-------CCccccccc-cccccccCCCcceeeCCCCEEee-eEECCCCEECCCcEEeCCCccCCceeecCCe
Q 009971 430 IIEDTLLM-------GADYYETDA-DRRFLAAKGSVPIGIGKNSHIKR-AIIDKNARIGDNVKIVNSDSVQEAARETDGY 500 (521)
Q Consensus 430 ~I~~s~i~-------~~~~~e~~~-~~~~~~~~~~~~~~Ig~~~~i~~-~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~ 500 (521)
.|...... ...+++... ...+.||+++ .||++++|.+ ++||++|.||.+++|.+ ..+++++.++.++
T Consensus 113 ~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~v---~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~-v~Ig~~~~Igags 188 (247)
T 1qre_A 113 VLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNV---SLAHQSQVHGPAAVGDDTFIGMQAFVFK-SKVGNNCVLEPRS 188 (247)
T ss_dssp EEEECCSBCTTSCBCGGGCEEETTEEESEEECTTC---EECTTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEECTTC
T ss_pred EEEecccccccCcccccceeeccCccCceEECCCC---EECCCCEEcCCcEECCCCEECCCCEEec-eEECCCCEECCCC
Confidence 99753210 001111111 1245666666 8999999986 99999999999999986 5555555555555
Q ss_pred EEcCCeEEECCCCEECCCccC
Q 009971 501 FIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 501 ~I~~g~v~I~~~~~i~~gsvi 521 (521)
+| .+ ++|+++++|++|++|
T Consensus 189 vV-~~-~~I~~~~~v~~g~vv 207 (247)
T 1qre_A 189 AA-IG-VTIPDGRYIPAGMVV 207 (247)
T ss_dssp EE-ES-CEECTTBEECTTCEE
T ss_pred EE-CC-eEeCCCCEECCCCEE
Confidence 55 44 557888888888764
No 63
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.46 E-value=4.8e-13 Score=131.92 Aligned_cols=140 Identities=18% Similarity=0.221 Sum_probs=90.5
Q ss_pred cccCCCcccCCCCcCCCceeecccccceEECCCcEEce-eEEe-eeEECCCCEECCCCEEc-------------ceEEEC
Q 009971 374 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIE-------------DTLLMG 438 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~-------------~s~i~~ 438 (521)
++++.+.|+.++.+.|++.+. .++.||++|+|+. +.|. ++.||++|.|++++.|. ..+.++
T Consensus 12 ~I~~~a~Ig~~v~I~~~~~I~----~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG 87 (266)
T 3r0s_A 12 VIEEGAQLGDDVVIEAYAYVS----KDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIG 87 (266)
T ss_dssp EECTTCEECTTCEECTTCEEC----TTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEEC
T ss_pred EECCCCEECCCCEECCCCEEC----CCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEEC
Confidence 566667777777777766653 4677888888886 7777 78888888888888884 233333
Q ss_pred -CccccccccccccccCCC----cceeeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCe-----E
Q 009971 439 -ADYYETDADRRFLAAKGS----VPIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----V 507 (521)
Q Consensus 439 -~~~~e~~~~~~~~~~~~~----~~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~-----v 507 (521)
+..... .+.+..+. -++.||+++.|. ++.|++++.||+++++.+...+..+++++++++|+.+. +
T Consensus 88 ~~~~Ig~----~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v 163 (266)
T 3r0s_A 88 KNATIRE----FATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFV 163 (266)
T ss_dssp TTCEECT----TCEEECCCTTTTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCCEECC----ceEecCCcccCCccEEECCCceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCEECCCc
Confidence 322211 11221111 015677777775 66677777777777777766666666777777766662 6
Q ss_pred EECCCCEECCCccC
Q 009971 508 TIIKDALIPSGTII 521 (521)
Q Consensus 508 ~I~~~~~i~~gsvi 521 (521)
+||++++|++|++|
T Consensus 164 ~Ig~~a~Vg~~s~V 177 (266)
T 3r0s_A 164 KVGEGCMIAGASAL 177 (266)
T ss_dssp EECTTCEECSSCBB
T ss_pred EECCCCEEccCCeE
Confidence 67777787777764
No 64
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.46 E-value=5.2e-13 Score=134.26 Aligned_cols=148 Identities=17% Similarity=0.220 Sum_probs=88.0
Q ss_pred cccCCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEEe-eeEECCCCEECCCCEEcc-----eEEECCccccc
Q 009971 374 FYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIED-----TLLMGADYYET 444 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~-----s~i~~~~~~e~ 444 (521)
+++|.+.|.+.+.+.+++.+. .+.| .++.||++|+|+. +.|. ++.||++|.|++++.|.. +.|..+.....
T Consensus 9 ~I~p~A~I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~ 88 (305)
T 3t57_A 9 LIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGH 88 (305)
T ss_dssp CBCTTSEECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECT
T ss_pred eECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECC
Confidence 445555555555555555554 3334 3566666666665 5555 566666666666665542 11111111000
Q ss_pred ---------------ccc------------ccccccCCC---cceeeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCc
Q 009971 445 ---------------DAD------------RRFLAAKGS---VPIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEA 493 (521)
Q Consensus 445 ---------------~~~------------~~~~~~~~~---~~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~ 493 (521)
... ..+.|..+. -++.||+++.|. ++.|+++|.||+++++.+...+...
T Consensus 89 ~a~Ig~~~q~~~~~~~~~~~i~IG~~~~I~~~~~I~~g~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~g~ 168 (305)
T 3t57_A 89 HAVVGVKCQDLKYKHGDECFLCIGNNNEIREFCSIHRSSKPSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGH 168 (305)
T ss_dssp TCEEEECCCCTTCCTTCCEEEEECSSCEECTTCEEECCSSTTCCEEECSSCEECTTCEECTTCEECSSCEECTTCEECTT
T ss_pred ccEeCccccccceecCCCceEEECCCcccCceEEEeecccccCccEEccCccccceEEEeCceEeCCceEECCCcccCCC
Confidence 000 122222211 135677777775 7788888888888888888888888
Q ss_pred eeecCCeEEcCCe-----EEECCCCEECCCccC
Q 009971 494 ARETDGYFIKSGI-----VTIIKDALIPSGTII 521 (521)
Q Consensus 494 ~~~~~~~~I~~g~-----v~I~~~~~i~~gsvi 521 (521)
.+++++++|+.+. ++||++|+|++||+|
T Consensus 169 v~Igd~~~Ig~~~~V~~~v~IG~~a~ig~gs~V 201 (305)
T 3t57_A 169 VVVEDNTHTAGASVVHQFCHIGSFAFIGGGSVV 201 (305)
T ss_dssp CEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CEECCceEEcCCCEEcCCeEECCCCEEcCCCeE
Confidence 8888888888773 668888888888764
No 65
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.46 E-value=5.7e-13 Score=131.24 Aligned_cols=144 Identities=15% Similarity=0.155 Sum_probs=84.2
Q ss_pred cccCCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEEe-eeEECCCCEECCCCEEc-------------ceEE
Q 009971 374 FYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIE-------------DTLL 436 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~-------------~s~i 436 (521)
++++.+.+.+.+.+.+.+.+. .+.| .++.||++|+|+. +.|. ++.||++|.|++++.|+ ...|
T Consensus 9 ~I~p~a~i~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~I 88 (265)
T 4e6u_A 9 LIHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEI 88 (265)
T ss_dssp CBCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEE
T ss_pred eECCCCEECCCCEECCCCEECCCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEE
Confidence 444444444444444444443 3333 5678888888886 7777 68888888888888883 2333
Q ss_pred ECCccccccccccccccCCCc----ceeeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCe-----
Q 009971 437 MGADYYETDADRRFLAAKGSV----PIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI----- 506 (521)
Q Consensus 437 ~~~~~~e~~~~~~~~~~~~~~----~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~----- 506 (521)
.++.... ..+.+..+.. .+.||+++.|. ++.|++++.||++++|.+...+.++++++++++|+.+.
T Consensus 89 G~~~~Ig----~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~ 164 (265)
T 4e6u_A 89 GNNNLIR----EHCSLHRGTVQDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQF 164 (265)
T ss_dssp CSSCEEC----TTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTT
T ss_pred CCCeEEC----CceEECcccccCCCceEEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEECCC
Confidence 3322221 1222222110 14566666665 55566666666666666666555566666666666552
Q ss_pred EEECCCCEECCCccC
Q 009971 507 VTIIKDALIPSGTII 521 (521)
Q Consensus 507 v~I~~~~~i~~gsvi 521 (521)
++||++++|++||+|
T Consensus 165 v~Ig~~~~i~~~svV 179 (265)
T 4e6u_A 165 CKIDSYSMIGGASLI 179 (265)
T ss_dssp CEECTTCEECTTCEE
T ss_pred cEECCCCEEcCCCEE
Confidence 667777888777764
No 66
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.44 E-value=2.2e-14 Score=152.16 Aligned_cols=99 Identities=21% Similarity=0.245 Sum_probs=77.9
Q ss_pred cceEECCCcEEce-eEEeeeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEeeeEECCCCE
Q 009971 399 TDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNAR 477 (521)
Q Consensus 399 ~~~~Ig~~~~I~~-~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~ 477 (521)
.++.||++|.|+. |.|.+++||++|.|+++|+|.+++|.++ +.||+++.|.+++||++|.
T Consensus 290 g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~-------------------~~Ig~~a~I~gv~IGd~v~ 350 (496)
T 3c8v_A 290 GDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERN-------------------CVTAHGGKIINAHLGDMIF 350 (496)
T ss_dssp SSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEES-------------------CEECTTCEEESEEEEETCE
T ss_pred CCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCC-------------------CEECCCcEEcCceECCCcE
Confidence 4788999999997 8889999999999999999999998876 6899999999999999999
Q ss_pred ECCCcEEeCCCccCCceeecCCeEEcCCeEEEC--CCCEECCCc
Q 009971 478 IGDNVKIVNSDSVQEAARETDGYFIKSGIVTII--KDALIPSGT 519 (521)
Q Consensus 478 Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~--~~~~i~~gs 519 (521)
||++++|.+.. ...+++|++++|+.| ++|. +++.||+++
T Consensus 351 IG~~a~I~~~~--~~~v~IG~~a~IGag-svV~~~~~~~I~~~s 391 (496)
T 3c8v_A 351 TGFNSFLQGSE--SSPLKIGDGCVVMPH-TIIDLEEPLEIPAGH 391 (496)
T ss_dssp ECTTCEEECCS--SSCEEECTTCEECTT-CEEECSSCEEECSSE
T ss_pred ECCCCEEeCCC--CcceEECCCCEECCC-CEEecCCCcEeCCCC
Confidence 99999998761 122445555555555 3333 444444444
No 67
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.43 E-value=1.1e-12 Score=129.66 Aligned_cols=59 Identities=12% Similarity=0.088 Sum_probs=33.3
Q ss_pred cccCCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEEee---------------eEECCCCEECCCCEEc
Q 009971 374 FYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIHH---------------SVVGLRSCISEGAIIE 432 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I~~---------------s~ig~~~~Ig~~~~I~ 432 (521)
++++.+.|..++.+.+++.+. ++.| .++.||++|.|++ |.|.+ ++||++|.|++++.|.
T Consensus 10 ~I~~~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~ 86 (273)
T 3fs8_A 10 IIKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIY 86 (273)
T ss_dssp EECTTCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEE
T ss_pred EECCCcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCCEEe
Confidence 444445554444444444444 3334 4466666666665 66553 6777777777666664
No 68
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.42 E-value=1.3e-12 Score=122.33 Aligned_cols=117 Identities=17% Similarity=0.322 Sum_probs=89.7
Q ss_pred cccCCCcccCCCCcCCCceeecccccceEECCCcEEce-eEEe----eeEECCCCEECCCCEEc------ceEEECCccc
Q 009971 374 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH----HSVVGLRSCISEGAIIE------DTLLMGADYY 442 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~----~s~ig~~~~Ig~~~~I~------~s~i~~~~~~ 442 (521)
++++...|..++.+.|++.+. .++.||++|.|+. |.|. +++||++|.|+++|.|. ++++.++
T Consensus 29 ~~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~--- 101 (191)
T 3ixc_A 29 YAGVSPSVDSTAFIAGNARII----GDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKF--- 101 (191)
T ss_dssp BTTBCCEECTTSEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTT---
T ss_pred ccCCCCEECCCCEECCCCEEe----CCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCC---
Confidence 556777778888888887763 3567777777776 6665 34999999999999997 4555444
Q ss_pred cccccccccccCCCcceeeCCCCEEeeeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCcc
Q 009971 443 ETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 520 (521)
Q Consensus 443 e~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsv 520 (521)
+.||+++.|.+++|+++|.||.+++|.+ +.+++++++|++| ++|.++..|+++++
T Consensus 102 ----------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~------~~~Ig~~~~Ig~g-svV~~~~~i~~~~~ 156 (191)
T 3ixc_A 102 ----------------VTIGHSCILHACTLGNNAFVGMGSIVMD------RAVMEEGSMLAAG-SLLTRGKIVKSGEL 156 (191)
T ss_dssp ----------------CEECTTCEECSCEECTTCEECTTCEECT------TCEECTTCEECTT-CEECTTCEECTTEE
T ss_pred ----------------CEECCCCEEECCEECCCCEECCCCEEeC------CeEECCCCEECCC-CEECCCcCcCCCeE
Confidence 5899999999999999999999998876 4567777777777 66777777777665
No 69
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.41 E-value=1.8e-12 Score=127.43 Aligned_cols=143 Identities=16% Similarity=0.189 Sum_probs=83.6
Q ss_pred ccCCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEEe-eeEECCCCEECCCCEEcc------------eEEEC
Q 009971 375 YDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIED------------TLLMG 438 (521)
Q Consensus 375 ~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~------------s~i~~ 438 (521)
+++.+.+.+.+.+.+.+.+. .+.| .++.||++|+|+. |.|. ++.||++|.|+++|.|.. .+.++
T Consensus 8 I~p~a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG 87 (262)
T 2qia_A 8 VHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIG 87 (262)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEEC
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEEC
Confidence 33444443334444444333 2333 4688888888887 7777 788888888888888853 23333
Q ss_pred C-ccccccccccccccCCC----cceeeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCe-----E
Q 009971 439 A-DYYETDADRRFLAAKGS----VPIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----V 507 (521)
Q Consensus 439 ~-~~~e~~~~~~~~~~~~~----~~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~-----v 507 (521)
+ .... ..+.|..+. -++.||+++.|. ++.|.+++.||+++++.+...+.+..+++++++|+.+. +
T Consensus 88 ~~~~Ig----~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~v 163 (262)
T 2qia_A 88 DRNRIR----ESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFC 163 (262)
T ss_dssp SSCEEC----TTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCceeC----CCCEEcCCccCCCCcCEECCCcEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEEccCCEECCCC
Confidence 2 1111 111221111 025666666665 56666666666666666666666666666666666552 6
Q ss_pred EECCCCEECCCccC
Q 009971 508 TIIKDALIPSGTII 521 (521)
Q Consensus 508 ~I~~~~~i~~gsvi 521 (521)
+||++++|++||+|
T Consensus 164 ~Ig~~~~ig~~s~V 177 (262)
T 2qia_A 164 IIGAHVMVGGCSGV 177 (262)
T ss_dssp EECTTCEECSSCEE
T ss_pred EECCCCEEccCCEE
Confidence 68888888888764
No 70
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.40 E-value=2.3e-12 Score=118.59 Aligned_cols=117 Identities=21% Similarity=0.321 Sum_probs=87.7
Q ss_pred cccCCCcccCCCCcCCCceeecccccceEECCCcEEce-eEEee----eEECCCCEECCCCEEc-----ceEEECCcccc
Q 009971 374 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHH----SVVGLRSCISEGAIIE-----DTLLMGADYYE 443 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~~----s~ig~~~~Ig~~~~I~-----~s~i~~~~~~e 443 (521)
+.++...+...+.+.|++.+. .++.||++|.|+. |.|.. ++||++|.|+++|.|. ++++.++
T Consensus 8 ~~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~---- 79 (173)
T 1xhd_A 8 YKEKKPKIASSAFIADYVTIT----GDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDD---- 79 (173)
T ss_dssp BTTBCCEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTT----
T ss_pred cCCCCCEECCCcEECCCCEEE----CCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCC----
Confidence 445566677777777777763 4678888888887 77764 8999999999999998 4555443
Q ss_pred ccccccccccCCCcceeeCCCCEEeeeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCcc
Q 009971 444 TDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 520 (521)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsv 520 (521)
+.|++++.|.+++|+++|.||.+++|... .+++++++|+++ ++|.++..||++++
T Consensus 80 ---------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~------~~Ig~~~~Ig~~-s~V~~~~~i~~~~v 134 (173)
T 1xhd_A 80 ---------------VTVGHQVILHSCHIKKDALIGMGSIILDG------AEIGEGAFIGAG-SLVSQGKKIPPNTL 134 (173)
T ss_dssp ---------------CEECTTCEEESCEECTTCEECTTCEECTT------CEECTTCEECTT-CEECTTCEECTTEE
T ss_pred ---------------CEECCCCEEeCCEECCCCEEcCCCEEcCC------CEECCCCEECCC-CEECCCcEeCCCCE
Confidence 58999999999999999999999988764 556666666666 55555556665554
No 71
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.40 E-value=7.1e-14 Score=135.70 Aligned_cols=140 Identities=19% Similarity=0.261 Sum_probs=67.2
Q ss_pred CceEEEEEecce----EEecCCHHHHHHHhhhcccCCCC---CccccccCCCcccCCCCcCCCceeecccccceEECCCc
Q 009971 335 GMRVQAYLYDGY----WEDIGTIEAFYNANLGITKKPIP---DFRYFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGC 407 (521)
Q Consensus 335 ~~~I~~~~~~g~----w~dIgt~edy~~An~~ll~~~~~---~~~~~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~ 407 (521)
..+++++...++ |.|+++ |+++|..++..... ...............+.+.|++.+. .++.||++|
T Consensus 38 ~~~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~----~~v~Ig~~~ 110 (240)
T 3r8y_A 38 TVQAFVNKKSGVLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIR----DHVEIGDNA 110 (240)
T ss_dssp TSEEEECSSEEEEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEB----SSCEECTTC
T ss_pred cceEEEcCCCeEEEccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEEC----CCcEECCCC
Confidence 456777766666 888877 88888876532210 0000000000011123333333331 345566666
Q ss_pred EEce-eEEe-eeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEee---------eEECCCC
Q 009971 408 VIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR---------AIIDKNA 476 (521)
Q Consensus 408 ~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~---------~ii~~~~ 476 (521)
+|+. +.|. +++||++|.|+.+|.|++.++++. + +.|++++.+.+ ++|+++|
T Consensus 111 ~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~---------------~---~~I~~~~~i~~~~~~~~~~~~~Ig~~~ 172 (240)
T 3r8y_A 111 VIMMNATINIGAVIGEGSMIDMNAVLGGRATVGK---------------N---CHVGAGAVLAGVIEPPSAKPVIVEDDV 172 (240)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECT---------------T---CEECTTCEECCCCSCTTSCCCEECTTC
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCEECC---------------C---cEECCCcEECCCccCCCCCCcEECCCC
Confidence 6654 4442 455555555555555542222221 2 25555665554 5666666
Q ss_pred EECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 477 RIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 477 ~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
.||.+++|.. ++++|++++|++|
T Consensus 173 ~IG~~~~I~~------~~~Ig~~~~I~~g 195 (240)
T 3r8y_A 173 VIGANVVVLE------GVTVGKGAVVAAG 195 (240)
T ss_dssp EECTTCEECT------TCEECTTCEECTT
T ss_pred EECCCCEECC------CcEECCCCEECCC
Confidence 6666666543 2344444555554
No 72
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.39 E-value=1.2e-12 Score=122.89 Aligned_cols=131 Identities=19% Similarity=0.178 Sum_probs=81.0
Q ss_pred CCCcccCCCCcCCCceeecccccceEECCCcEEce-eEEe----eeEECCCCEECCCCEEcceEEECCccc-cccccccc
Q 009971 377 RSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH----HSVVGLRSCISEGAIIEDTLLMGADYY-ETDADRRF 450 (521)
Q Consensus 377 ~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~----~s~ig~~~~Ig~~~~I~~s~i~~~~~~-e~~~~~~~ 450 (521)
++..|.+.+.+.+.+.+. .++.||++|+|+. |.|. ++.||++|.|+++|.|.+......... .......+
T Consensus 11 ~~v~I~~~a~I~~~a~I~----g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~ 86 (194)
T 3tv0_A 11 KSVKIAPGAVVCVESEIR----GDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPM 86 (194)
T ss_dssp -CEEECTTCEECTTSEEE----SSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCE
T ss_pred CCCEECCCCEEcCCCEEe----CCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCce
Confidence 334445555555555542 4678888888887 7775 468999999999999976543322111 11111334
Q ss_pred cccCCCcceeeCCCCEEeeeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 451 LAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 451 ~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
.||++. .|+.++.+.++.|++++.||.++.|. .+++||++|+|++| ++|.+++.||++++|
T Consensus 87 ~Ig~~~---~i~~~~~i~~~~Ig~~~~Ig~~~~I~------~gv~IG~~~~Igag-svV~~~~~Ip~~svv 147 (194)
T 3tv0_A 87 IIGTNN---VFEVGCYSQAMKMGDNNVIESKAYVG------RNVILTSGCIIGAC-CNLNTFEVIPENTVI 147 (194)
T ss_dssp EECSSC---EECTTCEECCSEECSSCEECTTCEEC------TTEEECSSCEECTT-CEECCCEEECTTEEE
T ss_pred EECCcc---eEecceeEeeeeecccceecceeeEC------CeEEECCCCEECCC-CEECCCcEECCCCEE
Confidence 454444 56666666666666666666666665 45677777777777 777777777777654
No 73
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.37 E-value=2.5e-12 Score=132.68 Aligned_cols=170 Identities=15% Similarity=0.182 Sum_probs=83.5
Q ss_pred EEecCCHHHHHHHhhhcccCCCCCccccccCCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEEe-eeEECCC
Q 009971 347 WEDIGTIEAFYNANLGITKKPIPDFRYFYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLR 422 (521)
Q Consensus 347 w~dIgt~edy~~An~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I~-~s~ig~~ 422 (521)
++-+.+|+..+.....++........ .+++.+.+...+.+.+++.+. ++.| .++.||++|+|+. |.|. ++.||++
T Consensus 95 ~l~~~~p~~~~~~~~~~~~~~~~~~~-~i~p~a~i~~~a~Ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~ 173 (372)
T 3pmo_A 95 ALVVANPYLAYASLSHLFDRKPKAAA-GIHPTAIVAADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEG 173 (372)
T ss_dssp EEECSCHHHHHHHHHGGGCCCCCCCS-EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred EEEECCHHHHHHHHHHHhcccccccc-ccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCC
Confidence 45566676655444444433212223 566666666655555555554 2223 2344444444443 3333 3444444
Q ss_pred CEECCCCEEcceEEECCcc-ccccc---------------------cccccccCCCcceeeCCCCEE-----eeeEECCC
Q 009971 423 SCISEGAIIEDTLLMGADY-YETDA---------------------DRRFLAAKGSVPIGIGKNSHI-----KRAIIDKN 475 (521)
Q Consensus 423 ~~Ig~~~~I~~s~i~~~~~-~e~~~---------------------~~~~~~~~~~~~~~Ig~~~~i-----~~~ii~~~ 475 (521)
|.|++++.|.+.+.+++.. ....+ ...+.||+++ .||++++| .+++|+++
T Consensus 174 ~~I~~~~~I~~~~~IG~~v~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd~v---~IGa~~~I~~g~~~~t~IG~~ 250 (372)
T 3pmo_A 174 GWLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQKIAQIGGVTIGDDV---EIGANTTIDRGALSDTLIGNG 250 (372)
T ss_dssp CEECTTCEECTTEEECTTCEECTTCEEEECCCCEEEETTEEEECCCCCCEEECSSC---EECTTCEEECCSSSCEEECTT
T ss_pred cccCCCcEEEeeeEECceeeccCCcEEecCcccccccCCcceeccccCCeEECCCC---EECCCcEEccCcccceEECCC
Confidence 4444333333322222110 00000 0133444444 55555555 34556666
Q ss_pred CEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 476 ARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 476 ~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
+.|+.++.|.....+++.+.++.++.|..+ ++||++|+|+++++|
T Consensus 251 ~~I~~~v~I~~~v~IG~~~~I~~~~~I~~~-v~IG~~~~Ig~~a~V 295 (372)
T 3pmo_A 251 VKLDNQIMIAHNVQIGDHTAMAACVGISGS-AKIGRHCMLAGGVGL 295 (372)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTT-CEECSSCEECTTCEE
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCC-CEECCCeEEeCCCEE
Confidence 666666666555555555555555555555 888999988888764
No 74
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.36 E-value=4e-12 Score=130.50 Aligned_cols=170 Identities=15% Similarity=0.178 Sum_probs=78.0
Q ss_pred eEEecCCHHHHHHHhhhcccCCCCCccccccCCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEEe-eeEECC
Q 009971 346 YWEDIGTIEAFYNANLGITKKPIPDFRYFYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGL 421 (521)
Q Consensus 346 ~w~dIgt~edy~~An~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I~-~s~ig~ 421 (521)
.|.-+.+|...+.....++.+..+ +. .+++.+.|.+++.+.+++.+. ++.| .++.||++|+|+. |.|. ++.||+
T Consensus 78 ~~i~~~~p~~~~~~~~~~~~~~~~-~~-~i~p~a~I~~~a~ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~ 155 (357)
T 4e79_A 78 NFIIVDNPYLAFAILTHVFDKKIS-ST-GIESTARIHPSAVISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGK 155 (357)
T ss_dssp EEEECSCHHHHHHHHHTTSSCCCC-CC-EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred cEEEECCHHHHHHHHHHHhccccc-cC-eeCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECC
Confidence 356677777654443444433211 13 555555555555554444443 2222 2344444444443 4444 444444
Q ss_pred CCEECCCCEEc------------ceEEECCccc--ccccc--------ccccccCCCcceeeCCCCEE-----eeeEECC
Q 009971 422 RSCISEGAIIE------------DTLLMGADYY--ETDAD--------RRFLAAKGSVPIGIGKNSHI-----KRAIIDK 474 (521)
Q Consensus 422 ~~~Ig~~~~I~------------~s~i~~~~~~--e~~~~--------~~~~~~~~~~~~~Ig~~~~i-----~~~ii~~ 474 (521)
+|.|++++.|. ...+++.+-+ ..... -.+.||+++ .||++++| .+++|++
T Consensus 156 ~~~I~~~~~I~~~~~IG~~~~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd~v---~IG~~~~I~~g~~~~t~Ig~ 232 (357)
T 4e79_A 156 DCFIDSYVTITGSSKLRDRVRIHSSTVIGGEGFGFAPYQGKWHRIAQLGSVLIGNDV---RIGSNCSIDRGALDNTILED 232 (357)
T ss_dssp SCEECTTCEECTTCEECSSCEECTTCEESCCCCCEEEETTEEEECCCCCCEEECTTC---EECTTCEECCCSSSCEEECT
T ss_pred CCEECCCcEEecccEEEeEeeccCCeEECcccCcccccCCceeeccccCcEEEcCCc---EEccccEEeccccCCccccC
Confidence 44444444442 2222221100 00000 023333333 34444444 2344444
Q ss_pred CCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 475 NARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 475 ~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
++.|+.++.|.....+++.+.++.++.|..+ ++||++|+|+++++|
T Consensus 233 ~~~I~~~v~I~~~v~IG~~~~i~~~~~i~~~-v~IG~~~~Ig~~s~V 278 (357)
T 4e79_A 233 GVIIDNLVQIAHNVHIGSNTAIAAKCGIAGS-TKIGKNCILAGACGV 278 (357)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred CcccCCCcccCCCeEECCCCEECCCCEECCC-cEECCCCEECcCCEE
Confidence 4444444444444444444444444444444 888999999888864
No 75
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.36 E-value=2.7e-12 Score=126.77 Aligned_cols=122 Identities=17% Similarity=0.207 Sum_probs=72.2
Q ss_pred CcccCCCCcCCCceee-ccccc-ceEECCCcEEce-eEE-------------eeeEECCCCEECCCCEEcce-------E
Q 009971 379 APIYTQPRYLPPSKML-DADVT-DSVIGEGCVIKN-CKI-------------HHSVVGLRSCISEGAIIEDT-------L 435 (521)
Q Consensus 379 ~~i~~~~~~~~~~~i~-~~~i~-~~~Ig~~~~I~~-~~I-------------~~s~ig~~~~Ig~~~~I~~s-------~ 435 (521)
+.|...+.+.+++.+. ++.|. ++.||++|.|+. |.| .+++||+++.|+++|.|... +
T Consensus 26 ~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~~I~~~~~I~~~~~~~~~~~ 105 (270)
T 1j2z_A 26 CVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIREFCMINPGTEGGIKKT 105 (270)
T ss_dssp CEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSCEECTTCEECCCCTTTTSEE
T ss_pred CEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCCEECCCeEEcCCeecCCccE
Confidence 3333334444444443 34443 677888888876 777 46788888888888888643 3
Q ss_pred EECCccccccccccccccCCCcceeeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCe
Q 009971 436 LMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI 506 (521)
Q Consensus 436 i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~ 506 (521)
.++++.. . ...++++.+ +.||+++.|. ++.+..+++||++++|.....+...++++++++|+.+.
T Consensus 106 ~IG~~~~-I--~~~~~I~~~---~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~IG~~a~Ig~~s 171 (270)
T 1j2z_A 106 LIGDKNL-L--MAYVHVAHD---CVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGCMIAGKS 171 (270)
T ss_dssp EECSSCE-E--CTTCEECTT---CEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTC
T ss_pred EECCCcE-E--CcccccCCC---cEECCCcEEcCCccccCccEECCCeEEecCCEECCCcEeCCceEEecCc
Confidence 3332100 0 012223322 2566666665 56666667777777777777777777777777777773
No 76
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.36 E-value=5.1e-12 Score=117.59 Aligned_cols=129 Identities=15% Similarity=0.214 Sum_probs=90.0
Q ss_pred cccCCCcccCCCCcCCCceeecccccceEECCCcEEce-eEEe-e---eEECCCCEECCCCEEcceEEECCccccccccc
Q 009971 374 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-H---SVVGLRSCISEGAIIEDTLLMGADYYETDADR 448 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~-~---s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~ 448 (521)
+......+...+.+.|++.+. .++.||++|.|+. +.|. + +.||++|.|+++|.|.... .........
T Consensus 11 ~~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~----~~~~~~~~~ 82 (187)
T 3r3r_A 11 YKNLFPGIGQRVMIDTSSVVI----GDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTH----KSSSNPHGN 82 (187)
T ss_dssp BTTBCCEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBC----CBTTBC-CB
T ss_pred hcccCcccCCCeEECCCCEEE----CceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCC----ccccCCCCC
Confidence 445667777888888888763 3577888888876 7776 3 4999999999999994210 000001112
Q ss_pred cccccCCCcceeeCCCCEEeeeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCcc
Q 009971 449 RFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 520 (521)
Q Consensus 449 ~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsv 520 (521)
.+.||+++ .||++++|.+++||++|.||.+++|.. +++++++++|+++ ++|.++..|+++++
T Consensus 83 ~~~Ig~~~---~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~------~~~Ig~~~~Ig~~-s~V~~~~~i~~~~v 144 (187)
T 3r3r_A 83 PLIIGEDV---TVGHKVMLHGCTIGNRVLVGMGSIVLD------GAIIEDDVMIGAG-SLVPQHKRLESGYL 144 (187)
T ss_dssp CEEECSSC---EECTTCEEESCEECSSEEECTTCEECT------TCEECSSEEECTT-CEECTTCEECTTEE
T ss_pred CeEECCCC---EECCCCEEeCcEECCCCEECCCCEECC------CCEECCCCEECCC-CEECCCcCcCCCcE
Confidence 33444444 899999999999999999999998865 4667777777777 66777777777765
No 77
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.36 E-value=4.2e-12 Score=129.60 Aligned_cols=169 Identities=15% Similarity=0.193 Sum_probs=88.7
Q ss_pred EecCCHHHHHHHhhhcccCCCCCccccccCCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEEe-eeEECCCC
Q 009971 348 EDIGTIEAFYNANLGITKKPIPDFRYFYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRS 423 (521)
Q Consensus 348 ~dIgt~edy~~An~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I~-~s~ig~~~ 423 (521)
+-+.+|...+.....++....+... .+++.+.+..++++.+++.+. ++.| .++.||++|+|+. |.|. ++.||++|
T Consensus 74 ~~~~~p~~~~~~~~~~~~~~~~~~~-~i~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~ 152 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILDTTPQPAQ-NIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGS 152 (341)
T ss_dssp EECSCHHHHHHHHHHHHCCCCCSCC-SBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EEeCCHHHHHHHHHHHhcccCCccC-ccCCCcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCc
Confidence 4456776644433334333222223 566666666666666655554 3333 2455555555554 5553 45555555
Q ss_pred EECCCCEEcceEEEC-Cccccccc---------------------cccccccCCCcceeeCCCCEE-----eeeEECCCC
Q 009971 424 CISEGAIIEDTLLMG-ADYYETDA---------------------DRRFLAAKGSVPIGIGKNSHI-----KRAIIDKNA 476 (521)
Q Consensus 424 ~Ig~~~~I~~s~i~~-~~~~e~~~---------------------~~~~~~~~~~~~~~Ig~~~~i-----~~~ii~~~~ 476 (521)
.|++++.|.+.+.++ +.+....+ .....||+++ .||++++| .+++|++++
T Consensus 153 ~I~~~~~I~~~~~IG~~~~I~~g~~I~~~~fg~~~~~~~~~~i~~~g~v~IGd~v---~Ig~~~~I~~~~~~~~~Ig~~~ 229 (341)
T 3eh0_A 153 RLWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRV---EIGACTTIDRGALDDTIIGNGV 229 (341)
T ss_dssp EECSSCEECTTCEECSSCEECTTCEEEECCSCEEEETTEEEECCCCCCEEECSSC---EECTTCEEECCSSSCEEECTTC
T ss_pred EECCCcEECCCCEECCccEEcCCcEECCccccccccCCccccccccCcEEECCCc---EECCccEeeccccCceEeccce
Confidence 555444442222122 11110000 0123444444 55555555 245566666
Q ss_pred EECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 477 RIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 477 ~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
.|+.++.|.....+++.+.++.++.|..+ ++||++|+|+++++|
T Consensus 230 ~I~~~v~I~~~v~IG~~~~i~~~~~i~g~-v~IG~~~~Ig~~s~V 273 (341)
T 3eh0_A 230 IIDNQCQIAHNVVIGDNTAVAGGVIMAGS-LKIGRYCMIGGASVI 273 (341)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTT-EEECTTCEECTTCEE
T ss_pred EECCCCEEeCCcEECCCCEECCCCEECCC-cEECCCcEEcCCCEE
Confidence 66666666555555555555556666556 889999999999875
No 78
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.36 E-value=5.1e-12 Score=117.71 Aligned_cols=129 Identities=18% Similarity=0.307 Sum_probs=90.2
Q ss_pred cccCCCcccCCCCcCCCceeecccccceEECCCcEEce-eEEe----eeEECCCCEECCCCEEcceEEECCccccccccc
Q 009971 374 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH----HSVVGLRSCISEGAIIEDTLLMGADYYETDADR 448 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~----~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~ 448 (521)
+......+...+.+.|++.+. .++.||++|.|+. |.|. ++.||++|.|+++|.|..+..... .....
T Consensus 15 ~~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~----~~~~~ 86 (189)
T 3r1w_A 15 YQGISPKLGERVFVDRSSVII----GDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDY----NPGGY 86 (189)
T ss_dssp BTTBCCEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSS----STTCB
T ss_pred ccCcCCEECCCcEECCCCEEe----eeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccC----CCCCC
Confidence 445556777888888888774 3677888888876 7775 359999999999999977521110 00112
Q ss_pred cccccCCCcceeeCCCCEEeeeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCcc
Q 009971 449 RFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 520 (521)
Q Consensus 449 ~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsv 520 (521)
.+.||++ +.||+++.|.+++||++|.||.+++|.. +.+++++++|++| ++|.++..|+++++
T Consensus 87 ~~~Ig~~---~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~------~v~Ig~~~~Ig~~-s~V~~g~~i~~~~v 148 (189)
T 3r1w_A 87 PLIIGDD---VTIGHQAMLHGCTIGNRVLIGMKSMIMD------GAIVEDEVIVAAG-ATVSPGKVLESGFV 148 (189)
T ss_dssp CEEECSS---EEECTTCEEESCEECSSEEECTTCEECT------TCEECSSCEECTT-CEECTTCEECTTEE
T ss_pred CeEECCC---CEECCCCEEeCcEECCCcEECCCCEEcC------CCEECCCCEEccC-CEECCCCEeCCCCE
Confidence 3333334 4889999998889999999998888875 4566777777777 66666677776665
No 79
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.36 E-value=4.4e-12 Score=116.72 Aligned_cols=117 Identities=19% Similarity=0.217 Sum_probs=84.0
Q ss_pred cccCCCcccCCCCcCCCceeecccccceEECCCcEEce-eEEee----eEECCCCEECCCCEEcc-----eEEECCcccc
Q 009971 374 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHH----SVVGLRSCISEGAIIED-----TLLMGADYYE 443 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~~----s~ig~~~~Ig~~~~I~~-----s~i~~~~~~e 443 (521)
|.++...+..++.+.|++.+. .++.||++|.|+. +.|.. +.||++|.|+++|.|.. +++.++
T Consensus 6 ~~~~~~~i~~~~~I~~~a~i~----g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~---- 77 (173)
T 1v3w_A 6 INGKKPRIHPSAFVDENAVVI----GDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEY---- 77 (173)
T ss_dssp BTTBCCEECTTCEECTTSEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSS----
T ss_pred cCCCCCEECCCCEECCCCEEe----CCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCC----
Confidence 445556677777788877763 3677888888876 76663 89999999999999974 344333
Q ss_pred ccccccccccCCCcceeeCCCCEEeeeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCcc
Q 009971 444 TDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 520 (521)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsv 520 (521)
+.|++++.|.+++|+++|.||.++.|.+. ++++++++|+++ ++|.++..||++++
T Consensus 78 ---------------~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~------~~Ig~~~~Ig~~-s~V~~~~~i~~~~~ 132 (173)
T 1v3w_A 78 ---------------VTIGHNAMVHGAKVGNYVIIGISSVILDG------AKIGDHVIIGAG-AVVPPNKEIPDYSL 132 (173)
T ss_dssp ---------------CEECTTCEEESCEECSSEEECTTCEECTT------CEECSSEEECTT-CEECTTCEECTTEE
T ss_pred ---------------CEECCCCEECCCEECCCCEECCCCEEeCC------CEECCCCEECCC-CEECCCcEeCCCcE
Confidence 48999999999999999999999998875 445555555555 44444444444443
No 80
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.35 E-value=1.1e-11 Score=131.60 Aligned_cols=213 Identities=16% Similarity=0.168 Sum_probs=139.8
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecC---CCcchhHHHHHHhHhC--------C------CceEEEEecCChHHH
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLG---ANYRLIDIPVSNCLNS--------N------ISKIYVLTQFNSASL 150 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~---G~~pLI~~~l~~l~~~--------g------i~~I~Iv~~~~~~~i 150 (521)
.++.+||||||.||||+ ...||+|+||+ |+ |+|+++++.+... | |..+++...+..+.+
T Consensus 102 gkvavvlLaGG~GTRLg---~~~PK~l~~v~l~~gk-~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t 177 (486)
T 2yqc_A 102 GEVAVLLMAGGQGTRLG---SSAPKGCFNIELPSQK-SLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNAT 177 (486)
T ss_dssp TCEEEEEEEESBCGGGT---CSSBGGGCBCCCTTCC-BHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHH
T ss_pred CCeEEEEEcCCccccCC---CCCCCccceecCCCCC-cHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHH
Confidence 37999999999999995 67899999998 76 9999999999875 6 778888888888999
Q ss_pred HHHHHHhhhccCCCC----cCCCcEEEeeccc--C----CCCCC-CCCChHHHHHHHH-----HHhhhcCcceEEEEeCC
Q 009971 151 NRHLSRAYASNMGGY----KNEGFVEVLAAQQ--S----PENPN-WFQGTADAVRQYL-----WLFEEHNVLEFLVLAGD 214 (521)
Q Consensus 151 ~~~l~~~~~~~~~~~----~~~~~v~vl~~~q--~----~~~~~-~~~Gt~~al~~~~-----~~l~~~~~~~~Lvl~gD 214 (521)
.+||++...+++... |.+..+..+.... . +.... .+.|+++.+.... +.+.....+++.+.+.|
T Consensus 178 ~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vD 257 (486)
T 2yqc_A 178 ESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVD 257 (486)
T ss_dssp HHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEETT
T ss_pred HHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECCC
Confidence 999988544443210 1111111111100 0 00001 2579988776542 22333356789999999
Q ss_pred e-ec-cccHHHHHHHHHhcCCcEEEEEEecCcccCcceeEEEeCC-CC--CeEEeeeCCChhhhhhcccccccccCCchh
Q 009971 215 H-LY-RMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDE-EG--RIIEFSEKPKGEQLKAMKVDTTILGLDDER 289 (521)
Q Consensus 215 ~-l~-~~dl~~ll~~h~~~~aditi~~~~~~~~~~~~~g~v~~d~-~g--rV~~i~ekp~~~~~~~~~~~~~~~~~~~~~ 289 (521)
. +. ..|. .++..|.++++++++.+.+... .....|++...+ +| +|++|.|+|...... . +.. ..
T Consensus 258 N~l~~~~Dp-~~lg~~~~~~~~~~~~vv~k~~-~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~-~--~~~------~~ 326 (486)
T 2yqc_A 258 NCLVKVADP-IFIGFAIAKKFDLATKVVRKRD-ANESVGLIVLDQDNQKPCVIEYSEISQELANK-K--DPQ------DS 326 (486)
T ss_dssp BTTCCTTCH-HHHHHHHHHTCSEEEEEEECCS-TTCCCCEEEEETTTTEEEEECGGGSCHHHHHC-E--ETT------EE
T ss_pred CceeeccCH-HHHHHHHHcCCCEEEEEEEcCC-CCCceeEEEEEecCCCEEEEEEecCCHHHhhc-c--ccc------cc
Confidence 8 44 3553 5788999999999988876532 224677776431 34 588998988643211 0 000 00
Q ss_pred hccCCceeeEEEEEEeHHHHHHHHhh
Q 009971 290 AKEMPYIASMGIYVISKDVMLNLLRD 315 (521)
Q Consensus 290 ~~~~~~l~~~GIyifs~~vl~~ll~~ 315 (521)
.....+..++++|+|+.+++.+++..
T Consensus 327 ~~~~~~~~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 327 SKLFLRAANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp EEESSCEEEEEEEEEEHHHHHHHHHH
T ss_pred ccccccceeEEEEEEeHHHHHHHHHh
Confidence 01123588999999999999874543
No 81
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.35 E-value=3.7e-11 Score=123.57 Aligned_cols=210 Identities=13% Similarity=0.122 Sum_probs=141.4
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceec---CCCcchhHHHHHHhHh-------------CCCceEEEEecCChHHHH
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPL---GANYRLIDIPVSNCLN-------------SNISKIYVLTQFNSASLN 151 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI---~G~~pLI~~~l~~l~~-------------~gi~~I~Iv~~~~~~~i~ 151 (521)
.++.+|+||||.||||+ ...||+|+|| .|+ |++++.++.+.. .+|.-+++...+..+.+.
T Consensus 34 gkvavvlLAGG~GTRLG---~~~PK~~~~Vgl~~gk-s~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~ 109 (405)
T 3oc9_A 34 GKTALITPAGGQGSRLG---FEHPKGMFVLPFEIPK-SIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEIN 109 (405)
T ss_dssp TCEEEEEECCSBCTTTT---CCSBGGGCEECSSSCE-EHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHH
T ss_pred CceEEEEecCCCccccc---CCCCCccccccCCCCC-cHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHH
Confidence 47999999999999996 4799999999 776 999999988853 567766666677789999
Q ss_pred HHHHHhhhccCCC----CcCCCcEEEeeccc-----CCCCCCC-CCChHHHHHHHH-----HHhhhcCcceEEEEeCCe-
Q 009971 152 RHLSRAYASNMGG----YKNEGFVEVLAAQQ-----SPENPNW-FQGTADAVRQYL-----WLFEEHNVLEFLVLAGDH- 215 (521)
Q Consensus 152 ~~l~~~~~~~~~~----~~~~~~v~vl~~~q-----~~~~~~~-~~Gt~~al~~~~-----~~l~~~~~~~~Lvl~gD~- 215 (521)
+|+++...|++.. .|.+..+..+.... .+....| +.|+++.+.... +.+.+...+++++.+.|.
T Consensus 110 ~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN~ 189 (405)
T 3oc9_A 110 NYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDNI 189 (405)
T ss_dssp HHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTBT
T ss_pred HHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCCc
Confidence 9999855454321 01111111110000 0001112 578888776532 223333457899999999
Q ss_pred eccccHHHHHHHHHhcCCcEEEEEEecCcccCcceeEEEe-CCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCC
Q 009971 216 LYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKI-DEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMP 294 (521)
Q Consensus 216 l~~~dl~~ll~~h~~~~aditi~~~~~~~~~~~~~g~v~~-d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (521)
|.......++..|.++++++++-+.+.... ....|.+.. |...+|++|.|.|+. . ..-..+. ....
T Consensus 190 L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~-dek~Gvl~~~dg~~~vvEysei~~e-~-e~~~~~g----------~l~f 256 (405)
T 3oc9_A 190 LCKDVDPNMIGYMDLLQSEICIKIVKKGFK-EEKVGVLVKEQERIKVVEYTELTDE-L-NKQLSNG----------EFIY 256 (405)
T ss_dssp TCCSSCHHHHHHHHHTTCSEEEEEEECCST-TCSCCEEEEETTEEEEECGGGCCTT-T-TCBCTTS----------CBSS
T ss_pred ccccCCHHHHHHHHHcCCCEEEEEEECCCC-CCccceEEEECCeeEEEEEeeCCHH-H-hhcCCCC----------ceee
Confidence 888888889999999999999888775432 246777764 544589999988775 2 1100000 1113
Q ss_pred ceeeEEEEEEeHHHHHHHHh
Q 009971 295 YIASMGIYVISKDVMLNLLR 314 (521)
Q Consensus 295 ~l~~~GIyifs~~vl~~ll~ 314 (521)
+..+.++++|+.++|+++.+
T Consensus 257 n~~Ni~~h~fs~~fL~~i~~ 276 (405)
T 3oc9_A 257 NCGHISINGYSTSFLEKAAE 276 (405)
T ss_dssp CEEEEEEEEEEHHHHHHHTT
T ss_pred ccceeEeeecCHHHHHHhhh
Confidence 46789999999999987763
No 82
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.35 E-value=6e-12 Score=123.49 Aligned_cols=122 Identities=15% Similarity=0.135 Sum_probs=69.0
Q ss_pred CCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEE-------------e-eeEECCCCEECCCCEEcc------
Q 009971 377 RSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKI-------------H-HSVVGLRSCISEGAIIED------ 433 (521)
Q Consensus 377 ~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I-------------~-~s~ig~~~~Ig~~~~I~~------ 433 (521)
+.+.|...+.+.+.+.+. ++.| .++.||++|.|+. |.| . +++||++|.|+++|.|..
T Consensus 23 ~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ 102 (259)
T 3hsq_A 23 PYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDS 102 (259)
T ss_dssp TTCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBTTB
T ss_pred CCCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccCCC
Confidence 333333333344444333 3333 3477777777776 666 3 678888888888887762
Q ss_pred -eEEECCccccccccccccccCCCcceeeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 434 -TLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 434 -s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
..+.++.+.. ..+.++.++ .||+++.|. ++.+..+++||++|+|.....+....+++++++|+.+
T Consensus 103 ~~~IG~~~~I~----~~~~I~~~~---~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~Vg~~ 169 (259)
T 3hsq_A 103 PTVIGNKNYFM----GNSHVGHDC---ILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDYSMVAGL 169 (259)
T ss_dssp CEEECSSCEEC----TTCEECTTC---EECSSCEECTTCEECTTCEECSSCEECSSEEECTTCEECTTCEECSS
T ss_pred cEEECCCcEEc----CCcEECCCc---EECCccEEcCCceECCccEECCCcEEeCCCEECCCCEECCCCEECCC
Confidence 2222211110 123333333 555566555 5566666667777777666666667777777777777
No 83
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.33 E-value=4.6e-12 Score=118.45 Aligned_cols=25 Identities=20% Similarity=0.278 Sum_probs=12.4
Q ss_pred eecCCeEEcCCeEEECCCCEECCCcc
Q 009971 495 RETDGYFIKSGIVTIIKDALIPSGTI 520 (521)
Q Consensus 495 ~~~~~~~I~~g~v~I~~~~~i~~gsv 520 (521)
.+|.++.|..| ++||++++|++||+
T Consensus 110 ~IG~~~~I~~g-~~Ig~~~~Igagsv 134 (192)
T 3mqg_A 110 TLGANCTVVCG-ATIGRYAFVGAGAV 134 (192)
T ss_dssp EECTTCEECTT-CEECTTCEECTTCE
T ss_pred EECCCCEECCC-CEECCCCEEcCCCE
Confidence 33334444444 55555555555554
No 84
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.33 E-value=2e-11 Score=114.47 Aligned_cols=84 Identities=21% Similarity=0.331 Sum_probs=43.9
Q ss_pred ceEEC--CCcEEceeEEeeeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEe-eeEECCCC
Q 009971 400 DSVIG--EGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKNA 476 (521)
Q Consensus 400 ~~~Ig--~~~~I~~~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~ 476 (521)
++.|| ++|+|++ +++|+.+++||++|.|.....++++ +.||++++|. ++.|..++
T Consensus 87 ~~~Ig~~~g~~I~~----~~~I~~~~~IG~~~~I~~~~~i~~~------------------~~Ig~~~~I~~~~~i~~~~ 144 (194)
T 3bfp_A 87 SAIVEENAGILIMP----YVVINAKAKIEKGVILNTSSVIEHE------------------CVIGEFSHVSVGAKCAGNV 144 (194)
T ss_dssp TCEECTTSCCEECT----TCEECTTCEECTTCEECTTCEECTT------------------CEECTTCEECTTCEECTTC
T ss_pred CceeCCCCCcEEcC----CCEECCCCEECCCCEECCCCEEcCC------------------CEECCCCEECCCCEECCCc
Confidence 34566 6666664 3344444555555544433333321 3555555555 45555556
Q ss_pred EECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 477 RIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 477 ~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
+||++++|.....+.++.+++++++|++|
T Consensus 145 ~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igag 173 (194)
T 3bfp_A 145 KIGKNCFLGINSCVLPNLSLADDSILGGG 173 (194)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred EECCCCEEcCCCEECCCCEECCCCEECCC
Confidence 66666666554434444555555555555
No 85
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.31 E-value=1.3e-11 Score=117.36 Aligned_cols=128 Identities=22% Similarity=0.257 Sum_probs=85.9
Q ss_pred cccCCCCcCCCceeecccccceEECCCcEEce-eEEe-----eeEECCCCEECCCCEEcce---EEECCccccccccccc
Q 009971 380 PIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-----HSVVGLRSCISEGAIIEDT---LLMGADYYETDADRRF 450 (521)
Q Consensus 380 ~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~-----~s~ig~~~~Ig~~~~I~~s---~i~~~~~~e~~~~~~~ 450 (521)
.+...+.+.+.+.+. .++.||++|.|+. |.|. +++||++|.|+++|.|..+ ..++.+ .....+
T Consensus 41 ~i~~~~~I~~~a~i~----~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~----~~~~~~ 112 (213)
T 3kwd_A 41 EIAPTAYVHSFSNLI----GDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDD----GQEYSV 112 (213)
T ss_dssp EECTTCEECTTSEEE----ESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTT----SCEESE
T ss_pred cCCCCCEECCCCEEe----CceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccC----Ccccce
Confidence 344445555555542 4577888888887 7775 3799999999999999741 122211 001235
Q ss_pred cccCCCcceeeCCCCEEee-eEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 451 LAAKGSVPIGIGKNSHIKR-AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 451 ~~~~~~~~~~Ig~~~~i~~-~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
.||+++ .|++++.|.+ ++|+++|.||.+++|.+ ..+++.+.++.+++| .+ ++|++++.|++|++|
T Consensus 113 ~IG~~v---~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~-~~Ig~~~~Igags~V-~~-~~i~~~~~v~~~~vv 178 (213)
T 3kwd_A 113 WIGDNV---SITHMALIHGPAYIGDGCFIGFRSTVFN-ARVGAGCVVMMHVLI-QD-VEIPPGKYVPSGMVI 178 (213)
T ss_dssp EECTTC---EECTTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEECSSCEE-ES-CEECTTBEECTTCEE
T ss_pred EECCCc---EECCCcEEcCCCEECCCCEECCCCEEeC-cEECCCCEEcCCCEE-CC-cEeCCCCEECCCcEE
Confidence 555555 7888888885 99999999999999975 444555555555554 23 457888888888864
No 86
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.31 E-value=1.1e-11 Score=123.10 Aligned_cols=50 Identities=14% Similarity=0.003 Sum_probs=24.5
Q ss_pred eEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCcc
Q 009971 470 AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 520 (521)
Q Consensus 470 ~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsv 520 (521)
++||+++.|+.++.|.....+++.+.++.++.+..+ ++||++++|+++++
T Consensus 126 ~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~-v~Igd~~~Ig~~a~ 175 (283)
T 4eqy_A 126 TTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGH-VEIGDWAIVGGMSG 175 (283)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTT-CEECTTCEECTTCE
T ss_pred eEECCCcEECceeEEcCCcEECCCcEECCCceEcCC-cEECCCeEEecCCE
Confidence 445555555555544444444444444444444444 55555555555554
No 87
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.30 E-value=1.8e-12 Score=130.27 Aligned_cols=40 Identities=18% Similarity=0.189 Sum_probs=22.2
Q ss_pred hhcchHhhhhCCceEEEEEecce-----EEecCCHHHHHHHhhhcc
Q 009971 324 GSEVIPGATSIGMRVQAYLYDGY-----WEDIGTIEAFYNANLGIT 364 (521)
Q Consensus 324 ~~dil~~li~~~~~I~~~~~~g~-----w~dIgt~edy~~An~~ll 364 (521)
..++|..|-+.+.++..+ .++. |.+......|......+.
T Consensus 73 ~~~~~~~l~~~~~rva~~-~~~~~~~~~w~k~~ill~f~~~~~~~i 117 (316)
T 3tk8_A 73 VAHAIEQLDRGALRVAEK-IDGAWTVHQWLKKAVLLSFRLEDNAPM 117 (316)
T ss_dssp HHHHHHHHHTTSSCSEEE-ETTEEEECHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHhCCCEEeee-ccchHHHHHHHHHHHHHhhhhcccccc
Confidence 467777777766777776 3443 444444555444443333
No 88
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.30 E-value=1.6e-11 Score=120.53 Aligned_cols=45 Identities=11% Similarity=0.127 Sum_probs=21.5
Q ss_pred eCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 461 IGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 461 Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
||+++.|. ++.+..+++||++++|.....+....+++++++|+.+
T Consensus 129 Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~v~Ig~~~~ig~~ 174 (262)
T 2qia_A 129 VGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGC 174 (262)
T ss_dssp ECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSS
T ss_pred ECCCeEECCcccccCCcEECCCcEEccCCEECCCCEECCCCEEccC
Confidence 34444443 3444444444555555444444455555555555555
No 89
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.30 E-value=1.9e-11 Score=120.34 Aligned_cols=46 Identities=13% Similarity=0.217 Sum_probs=21.5
Q ss_pred eeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 460 GIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 460 ~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
.||+++.|. ++.+..+++||++|+|.....+.+..+++++++|+.+
T Consensus 130 ~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~i~~~ 176 (265)
T 4e6u_A 130 IVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGGA 176 (265)
T ss_dssp EECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTT
T ss_pred EECCCcEEcCCcEECCCcEECCCeEEcCCCEECCCcEECCCCEEcCC
Confidence 344444443 3444444444444444444444444555555555555
No 90
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.28 E-value=2.5e-11 Score=119.58 Aligned_cols=50 Identities=14% Similarity=-0.006 Sum_probs=19.9
Q ss_pred eEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCcc
Q 009971 470 AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 520 (521)
Q Consensus 470 ~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsv 520 (521)
++||+++.|+.++.+.....+++.+.++.++.+..+ ++||++++|+++++
T Consensus 109 ~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~-v~Igd~~~Ig~~a~ 158 (266)
T 3r0s_A 109 TRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGH-VELGDFTVVGGLTP 158 (266)
T ss_dssp EEECTTCEECTTCEECTTCEECSSCEECTTCEECTT-CEECTTCEECTTCE
T ss_pred EEECCCceeCCcceEccccccCCCeEECCCceecCC-eEECCCcEEccCCE
Confidence 344444444444444333333333333333333333 44444444444443
No 91
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.27 E-value=5.2e-12 Score=125.01 Aligned_cols=50 Identities=26% Similarity=0.468 Sum_probs=25.9
Q ss_pred eEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCC-------EECCCcc
Q 009971 470 AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDA-------LIPSGTI 520 (521)
Q Consensus 470 ~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~-------~i~~gsv 520 (521)
++||++|.||.+++|.....+++++.++.|++|..+ ++|++++ .||++++
T Consensus 178 v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~~-~~I~~~~~~~~~~g~Vp~~sv 234 (276)
T 3gos_A 178 TIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQS-TRIYDRETGEVHYGRVPAGSV 234 (276)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTT-CCEEETTTCCEECSEECTTEE
T ss_pred eEECCCCEECCCCEECCCCEECCCCEECCCCEECCC-cEEccccccceeccccCCCcE
Confidence 556666666666655554444444444444444444 4444444 5666655
No 92
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.27 E-value=2.7e-11 Score=113.22 Aligned_cols=102 Identities=16% Similarity=0.320 Sum_probs=82.3
Q ss_pred ceEECCCcEEce-eEEe-eeEECCCCEECCCCEEcce---EEECCccccccccccccccCCCcceeeCCCCEEe------
Q 009971 400 DSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDT---LLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK------ 468 (521)
Q Consensus 400 ~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s---~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~------ 468 (521)
...||++|.|.. +.|. ++.||++|.|+++|.|... +.+++ + +.|++++.|.
T Consensus 33 ~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~---------------~---~~I~~~~~I~~~~~~g 94 (191)
T 3ixc_A 33 SPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGE---------------G---TNIQDNTVVHTDSMHG 94 (191)
T ss_dssp CCEECTTSEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECT---------------T---CEECTTCEECC----C
T ss_pred CCEECCCCEECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECC---------------C---CEECCCCEEeecCCcC
Confidence 356777777776 6665 7899999999999999743 24443 2 4899999997
Q ss_pred eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 469 RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 469 ~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
+++|+++|.||+++.+.+ ..+++.+.++.+++|..+ ++||++++|++|++|
T Consensus 95 ~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~I~~~-~~Ig~~~~Ig~gsvV 145 (191)
T 3ixc_A 95 DTVIGKFVTIGHSCILHA-CTLGNNAFVGMGSIVMDR-AVMEEGSMLAAGSLL 145 (191)
T ss_dssp CEEECTTCEECTTCEECS-CEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred CeEECCCCEECCCCEEEC-CEECCCCEECCCCEEeCC-eEECCCCEECCCCEE
Confidence 899999999999999865 677888888888888888 889999999998875
No 93
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.26 E-value=2.7e-11 Score=114.43 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=21.0
Q ss_pred ceEECCCcEEce-eEEe-eeEECCCCEECCCCEEc
Q 009971 400 DSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIE 432 (521)
Q Consensus 400 ~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~ 432 (521)
++.||++|.|+. |.|. ++.||++|.|+++|.|.
T Consensus 52 ~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~ 86 (205)
T 3vbi_A 52 VISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALY 86 (205)
T ss_dssp GEEECSSEEECTTCEEEEEEEECSSEEECTTCEEE
T ss_pred eeEECCCCEECCCCEEccceEECCCCEECCCeEEE
Confidence 455666666665 5555 56777777777777763
No 94
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.26 E-value=3.4e-11 Score=118.81 Aligned_cols=50 Identities=16% Similarity=0.159 Sum_probs=28.0
Q ss_pred ccCCCCcCCCceeecccccceEECCCcEEce-eEEe-eeEECCCCEECCCCEEcce
Q 009971 381 IYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDT 434 (521)
Q Consensus 381 i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s 434 (521)
|++++.+.|++.+. .++.|+++|+|+. |.|. ++.||++|.|+++|.|++.
T Consensus 5 i~~~~~I~~~a~I~----~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~ 56 (273)
T 3fs8_A 5 ISKSAIIKEGVIIG----ENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEY 56 (273)
T ss_dssp ECTTCEECTTCEEC----SSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEEC
T ss_pred cCCCeEECCCcEEC----CCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCc
Confidence 44445555555542 2344555555554 4444 5667777777777776653
No 95
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.26 E-value=2.7e-11 Score=122.62 Aligned_cols=127 Identities=12% Similarity=0.067 Sum_probs=70.7
Q ss_pred cccC-CCcccCCCCcCCCceeecccccceEECCCcEEce-eEEeeeEECCCCEECCCCEEcceEEECCcccccccc--cc
Q 009971 374 FYDR-SAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDAD--RR 449 (521)
Q Consensus 374 ~~~~-~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~--~~ 449 (521)
|+++ ++.+..++.+.+++.+. .+++||++|.|++ |.|.+|+||+++.|+++++|+++++.++.....++. .+
T Consensus 60 ~I~~~~a~I~~~a~I~~~~~I~----g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~ 135 (334)
T 2pig_A 60 WIYDENAMAFAGTEITGNARIT----QPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQ 135 (334)
T ss_dssp EECCTTCEEETTCEECTTCEEE----SSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESS
T ss_pred EEcCCCeEEcCCcEECCCcEEe----eeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCC
Confidence 4444 45555555555555542 3466777777776 777777777777777777777776665543211111 22
Q ss_pred ccccCC-------CcceeeCCCCEEeeeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 450 FLAAKG-------SVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 450 ~~~~~~-------~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
+.+..+ ...+.|+++++|.+++|+++|+|+.++.|. ...+.+...++++++|.++
T Consensus 136 s~I~~~~~~~~~~~~g~~I~~~a~I~~s~I~~g~~I~~~a~I~-~svI~~~a~I~~~a~V~~~ 197 (334)
T 2pig_A 136 SEILAIQGLTHEHAQILQIYDRATVNHSRIVHQVQLYGNATIT-HAFIEHRAEVFDFALIEGD 197 (334)
T ss_dssp CEEEC--------CCCEEECTTCEEESCEEETTCEECTTCEEE-SEEECTTCEECTTCEEECC
T ss_pred EEEeecceeecccCCCeEECCCCEEeccEEcCCCEEcCCeEEe-CcEEcCCCEECCCcEECCc
Confidence 222221 112356666666666666666666666665 3444555555555555433
No 96
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.25 E-value=1.3e-11 Score=130.78 Aligned_cols=122 Identities=12% Similarity=0.150 Sum_probs=70.8
Q ss_pred CCcccCCCCcCCCceeeccc------------ccceEECCCcEEce-eEEe-eeEECCCCEECCCCEEcceEEECCcccc
Q 009971 378 SAPIYTQPRYLPPSKMLDAD------------VTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYE 443 (521)
Q Consensus 378 ~~~i~~~~~~~~~~~i~~~~------------i~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s~i~~~~~~e 443 (521)
...|...+.+.+++.+.++. +.++.||++|.|+. |.|. ++.||+++.||++|.|.++++..+....
T Consensus 286 ~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~i~~~~~i~ 365 (459)
T 4fce_A 286 HVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKARLGKGSKAG 365 (459)
T ss_dssp EEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEEEEEECTTCEEE
T ss_pred ceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEeeeEEcCCCEEC
Confidence 34445555566666555433 34455666666665 6665 5667777777777777666665543221
Q ss_pred cccc-ccccccCCCcceeeCCCCEEee--------eEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEE
Q 009971 444 TDAD-RRFLAAKGSVPIGIGKNSHIKR--------AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVT 508 (521)
Q Consensus 444 ~~~~-~~~~~~~~~~~~~Ig~~~~i~~--------~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~ 508 (521)
.... ..+.||+++ .||+++.+.+ ++||++|.||.+++|. .+.+||++++|++|.++
T Consensus 366 ~~~~i~~~~Ig~~~---~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~------~gv~Ig~~~~igagsvV 430 (459)
T 4fce_A 366 HLSYLGDAEIGAGV---NIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLV------APVTVANGATIGAGTTV 430 (459)
T ss_dssp EEEEEEEEEECTTC---EECTTCEEECBCSSCBCCEEECTTCEECTTCEEE------SSEEECTTCEECTTCEE
T ss_pred CceEECCeEECCCC---EECCCCEEeccccccCCCCEECCCeEEcCCCEEc------CCcEECCCCEECCCCEE
Confidence 1111 234555555 5666666642 5666666666666665 46778888888888433
No 97
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.23 E-value=8.3e-11 Score=108.09 Aligned_cols=101 Identities=20% Similarity=0.343 Sum_probs=81.6
Q ss_pred eEECCCcEEce-eEEe-eeEECCCCEECCCCEEcce---EEECCccccccccccccccCCCcceeeCCCCEEe-----ee
Q 009971 401 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDT---LLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-----RA 470 (521)
Q Consensus 401 ~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s---~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~-----~~ 470 (521)
..|++++.|.. +.|. ++.||++|.|+++|.|.+. +.+++ + +.|+++++|. ++
T Consensus 13 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~---------------~---~~I~~~~~I~~~~~~~~ 74 (173)
T 1xhd_A 13 PKIASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGD---------------R---VNVQDQCTLHQSPQYPL 74 (173)
T ss_dssp CEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECT---------------T---CEECTTCEEECCTTCCE
T ss_pred CEECCCcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECC---------------C---CEECCCCEEEeCCCCCe
Confidence 45677777765 5554 7899999999999999764 44443 3 4899999998 79
Q ss_pred EECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 471 IIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 471 ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
+|++++.||.++.|.+ ..+++.+.++.++.|..+ ++||++++|++|++|
T Consensus 75 ~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~i~~~-~~Ig~~~~Ig~~s~V 123 (173)
T 1xhd_A 75 ILEDDVTVGHQVILHS-CHIKKDALIGMGSIILDG-AEIGEGAFIGAGSLV 123 (173)
T ss_dssp EECTTCEECTTCEEES-CEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred EECCCCEECCCCEEeC-CEECCCCEEcCCCEEcCC-CEECCCCEECCCCEE
Confidence 9999999999999965 567777888888888888 899999999999875
No 98
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.23 E-value=2.6e-11 Score=128.82 Aligned_cols=122 Identities=13% Similarity=0.185 Sum_probs=77.9
Q ss_pred ccCCCcccCCCCcCCCceeec-----------ccccceEECCCcEEce-eEEe-eeEECCCCEECCCCEEcceEEECCcc
Q 009971 375 YDRSAPIYTQPRYLPPSKMLD-----------ADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADY 441 (521)
Q Consensus 375 ~~~~~~i~~~~~~~~~~~i~~-----------~~i~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s~i~~~~~ 441 (521)
+.+...|...+.+.+.+.+.+ +.+.+++||++|.|+. |.|. +++||.++.||++|.|.++++..+..
T Consensus 289 i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~Ig~~~~ 368 (468)
T 1hm9_A 289 LKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTK 368 (468)
T ss_dssp EESSCEECTTCEECTTCEEESCEECTTCEECSCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESCEECTTCE
T ss_pred ECCCCEECCCCEECCCCEEeccEEeCCcEEEEEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeeeEEcCCcE
Confidence 344455555556666665543 3345678888888887 7777 78888888888888888777766533
Q ss_pred cccccc-ccccccCCCcceeeCCCCEEee--------eEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 442 YETDAD-RRFLAAKGSVPIGIGKNSHIKR--------AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 442 ~e~~~~-~~~~~~~~~~~~~Ig~~~~i~~--------~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
...... ..+.||+++ .||.++.+.+ ++||++|.||.++.|.. +.++|++++|++|
T Consensus 369 i~~~~~i~~~~Ig~~~---~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~~i~~------~v~Ig~~~~i~~~ 432 (468)
T 1hm9_A 369 AGHLTYIGNCEVGSNV---NFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIA------PVELGDNSLVGAG 432 (468)
T ss_dssp EEEEEEEESEEECTTC---EECTTCEEECBCSSCBCCEEECTTCEECTTCEEES------SCEECTTCEECTT
T ss_pred eCCceEEccccccCCc---EECCCcEEecCcCccCCCcEECCCeEECCCCEEeC------CcEECCCCEECCC
Confidence 221110 234556555 6666666643 66666666666666654 5667777777777
No 99
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.22 E-value=7.6e-11 Score=118.41 Aligned_cols=84 Identities=18% Similarity=0.214 Sum_probs=38.7
Q ss_pred cCCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEEe-eeEECCCCEECCCCEEcceEEECCcccccccccccc
Q 009971 376 DRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFL 451 (521)
Q Consensus 376 ~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~ 451 (521)
++.+.|.+.+.+.|.+++. ++.| ..++|+++++|++ |.|. +++|+.++.||++|.|.....++.+ ....+.
T Consensus 5 ~~~~~I~p~A~I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d-----~~g~~~ 79 (305)
T 3t57_A 5 DSEVLIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDE-----LPGYTF 79 (305)
T ss_dssp ----CBCTTSEECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCS-----SSEEEE
T ss_pred CCCCeECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccC-----CCCceE
Confidence 4555666666666666654 3333 2244444444443 4444 4444444555555555444444321 012355
Q ss_pred ccCCCcceeeCCCCEE
Q 009971 452 AAKGSVPIGIGKNSHI 467 (521)
Q Consensus 452 ~~~~~~~~~Ig~~~~i 467 (521)
||+++ .|++++.|
T Consensus 80 IG~~~---~Ig~~a~I 92 (305)
T 3t57_A 80 IGCNN---IIGHHAVV 92 (305)
T ss_dssp ECSSC---EECTTCEE
T ss_pred ECCce---EECCccEe
Confidence 55555 55555555
No 100
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.21 E-value=1e-10 Score=108.74 Aligned_cols=101 Identities=19% Similarity=0.282 Sum_probs=81.3
Q ss_pred eEECCCcEEce-eEEe-eeEECCCCEECCCCEEcceE---EECCccccccccccccccCCCcceeeCCCCEE--------
Q 009971 401 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTL---LMGADYYETDADRRFLAAKGSVPIGIGKNSHI-------- 467 (521)
Q Consensus 401 ~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s~---i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i-------- 467 (521)
..||+++.|.. +.|. ++.||++|.|++++.|.... .+++ + +.|++++.|
T Consensus 16 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~---------------~---~~I~~~~~I~~~~~~~~ 77 (187)
T 3r3r_A 16 PGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGA---------------R---TNIQDGSVLHVTHKSSS 77 (187)
T ss_dssp CEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECT---------------T---CEECTTCEEECBCCBTT
T ss_pred cccCCCeEECCCCEEECceEECCCCEECCCcEEEcCCccEEECC---------------C---CEECCCCEEecCCcccc
Confidence 45677777765 5555 78999999999999998542 4443 2 489999999
Q ss_pred ----eeeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 468 ----KRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 468 ----~~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
.+++|++++.||.++.|.+ ..+++.+.++.+++|..+ ++||++++|++|++|
T Consensus 78 ~~~~~~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~I~~~-~~Ig~~~~Ig~~s~V 133 (187)
T 3r3r_A 78 NPHGNPLIIGEDVTVGHKVMLHG-CTIGNRVLVGMGSIVLDG-AIIEDDVMIGAGSLV 133 (187)
T ss_dssp BC-CBCEEECSSCEECTTCEEES-CEECSSEEECTTCEECTT-CEECSSEEECTTCEE
T ss_pred CCCCCCeEECCCCEECCCCEEeC-cEECCCCEECCCCEECCC-CEECCCCEECCCCEE
Confidence 6899999999999999975 677888888888888888 889999999998875
No 101
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.20 E-value=1.3e-10 Score=108.86 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=75.9
Q ss_pred ceEECCCcEEce-eEEe-eeEECCCCEECCCCEEcc---eEEECCccccccccccccccCCCcceeeCCCCEEe------
Q 009971 400 DSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIED---TLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK------ 468 (521)
Q Consensus 400 ~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~---s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~------ 468 (521)
++.|+++++|.. |.|. ++.||++|.|+++|+|.. .+.+| +++ .|+++++|.
T Consensus 12 ~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG---------------~~~---~I~~~~~I~~~~~~~ 73 (194)
T 3tv0_A 12 SVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIG---------------EGN---LIEEQALIINAYPDN 73 (194)
T ss_dssp CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEEC---------------TTC---EECTTCEEEECCCSC
T ss_pred CCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEEC---------------CCc---cccCCcccccccccc
Confidence 466777777776 6666 788888888888888742 23333 233 566666663
Q ss_pred -----------eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 469 -----------RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 469 -----------~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
.++|++++.|+.++.+. ...+++.+.++.++.|+.| ++||++|+|++|++|
T Consensus 74 ~~~~~~~~~~~~~~Ig~~~~i~~~~~i~-~~~Ig~~~~Ig~~~~I~~g-v~IG~~~~IgagsvV 135 (194)
T 3tv0_A 74 ITPDTEDPEPKPMIIGTNNVFEVGCYSQ-AMKMGDNNVIESKAYVGRN-VILTSGCIIGACCNL 135 (194)
T ss_dssp C---------CCEEECSSCEECTTCEEC-CSEECSSCEECTTCEECTT-EEECSSCEECTTCEE
T ss_pred cccccccCcCCceEECCcceEecceeEe-eeeecccceecceeeECCe-EEECCCCEECCCCEE
Confidence 36788888888888875 4567888888889999999 999999999999875
No 102
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.20 E-value=3.8e-11 Score=113.38 Aligned_cols=87 Identities=11% Similarity=0.077 Sum_probs=55.6
Q ss_pred eeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEe----eeEECCCCEECCCcEEe------
Q 009971 416 HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK----RAIIDKNARIGDNVKIV------ 485 (521)
Q Consensus 416 ~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~----~~ii~~~~~Ig~~~~i~------ 485 (521)
+..||++|.|+++|.|...+.+|+. +.|++++.|. +++||++|.||+++.|.
T Consensus 52 ~v~IG~~~~I~~~~~I~~~v~IG~~------------------~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~ 113 (205)
T 3vbi_A 52 VISIGNNVRIDDFCILSGKVTIGSY------------------SHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDF 113 (205)
T ss_dssp GEEECSSEEECTTCEEEEEEEECSS------------------EEECTTCEEEEEEEEEEECTTCEECTTCEEESEECCC
T ss_pred eeEECCCCEECCCCEEccceEECCC------------------CEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCCc
Confidence 4677777777777777665555542 4677777772 37777777777777772
Q ss_pred -------------------CCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 486 -------------------NSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 486 -------------------~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
....+++.+.+|.++.|..| ++||++|+|++|++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~g-v~Ig~~~~Ig~gsvV 167 (205)
T 3vbi_A 114 SGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPN-VVIGEGVAVGAMSMV 167 (205)
T ss_dssp SSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSS-CEECTTCEECTTCEE
T ss_pred ccccccCcccccccceeccCCEEECCCCEECCCCEEcCC-CEECCCCEEcCCCEE
Confidence 33334444555555555555 666677777776654
No 103
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.19 E-value=1.4e-10 Score=107.95 Aligned_cols=101 Identities=16% Similarity=0.265 Sum_probs=80.8
Q ss_pred eEECCCcEEce-eEEe-eeEECCCCEECCCCEEcce---EEECCccccccccccccccCCCcceeeCCCCEEeee-----
Q 009971 401 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDT---LLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRA----- 470 (521)
Q Consensus 401 ~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s---~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~~----- 470 (521)
..||+++.|.. +.|. ++.||++|.|+++|.|... +.+|+ + +.|++++.|..+
T Consensus 20 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~---------------~---~~I~~~~~I~~~~~~~~ 81 (189)
T 3r1w_A 20 PKLGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGA---------------R---TSVQDGSVLHITHASDY 81 (189)
T ss_dssp CEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECT---------------T---CEECTTCEEECBCCSSS
T ss_pred CEECCCcEECCCCEEeeeeEECCCCEECCCCEEecCCCceEECC---------------C---CEECCCCEEecCCcccC
Confidence 34666666665 5555 7899999999999999733 34443 2 488999998654
Q ss_pred -------EECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 471 -------IIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 471 -------ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
+|+++|.||+++.|.+ ..+++.+.++.+++|..+ ++||++++|++|++|
T Consensus 82 ~~~~~~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~i~~~-v~Ig~~~~Ig~~s~V 137 (189)
T 3r1w_A 82 NPGGYPLIIGDDVTIGHQAMLHG-CTIGNRVLIGMKSMIMDG-AIVEDEVIVAAGATV 137 (189)
T ss_dssp STTCBCEEECSSEEECTTCEEES-CEECSSEEECTTCEECTT-CEECSSCEECTTCEE
T ss_pred CCCCCCeEECCCCEECCCCEEeC-cEECCCcEECCCCEEcCC-CEECCCCEEccCCEE
Confidence 9999999999999976 778888888888888888 889999999999875
No 104
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.18 E-value=9.3e-11 Score=118.66 Aligned_cols=109 Identities=17% Similarity=0.134 Sum_probs=66.9
Q ss_pred ccCCCcccCCCCcCCCceee-cccccceEECCCcEEce-eEEeeeEECCCCEECCCCEEc-ceEEECC----------cc
Q 009971 375 YDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIE-DTLLMGA----------DY 441 (521)
Q Consensus 375 ~~~~~~i~~~~~~~~~~~i~-~~~i~~~~Ig~~~~I~~-~~I~~s~ig~~~~Ig~~~~I~-~s~i~~~----------~~ 441 (521)
+++.+.|...+.+.+.+++. ++.|.+++|++++.|++ +.|.+++|+.+|.|+.++++. ++.++++ .+
T Consensus 74 I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~ 153 (334)
T 2pig_A 74 ITGNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQ 153 (334)
T ss_dssp ECTTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEE
T ss_pred ECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeE
Confidence 34444444444444444444 55667888888888886 888888888888887777665 3444443 11
Q ss_pred -ccccccccccccCCCcceeeCCCCEEeeeEECCCCEECCCcEEeC
Q 009971 442 -YETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVN 486 (521)
Q Consensus 442 -~e~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~ 486 (521)
++......+.+++++ .|+.++.|.+++|++++.|++++.+..
T Consensus 154 I~~~a~I~~s~I~~g~---~I~~~a~I~~svI~~~a~I~~~a~V~~ 196 (334)
T 2pig_A 154 IYDRATVNHSRIVHQV---QLYGNATITHAFIEHRAEVFDFALIEG 196 (334)
T ss_dssp ECTTCEEESCEEETTC---EECTTCEEESEEECTTCEECTTCEEEC
T ss_pred ECCCCEEeccEEcCCC---EEcCCeEEeCcEEcCCCEECCCcEECC
Confidence 111122345566666 677777777777777777777766654
No 105
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.18 E-value=4.1e-10 Score=116.34 Aligned_cols=58 Identities=24% Similarity=0.168 Sum_probs=27.9
Q ss_pred cccCCCcccCCCCcCCCceee-ccccc-ceEECCCcEEce-eEEe-eeEECCCCEECCCCEE
Q 009971 374 FYDRSAPIYTQPRYLPPSKML-DADVT-DSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAII 431 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~-~~~i~-~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I 431 (521)
.+++.+.+..++.+.+++.+. ++.|. ++.||++|.|+. |.|. ++.||++|.|+++|+|
T Consensus 126 ~i~~~~~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I 187 (374)
T 2iu8_A 126 GIHPTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVI 187 (374)
T ss_dssp SBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred ccCCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEE
Confidence 345555555555555555553 33332 455555555553 4443 3444444444444444
No 106
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.17 E-value=4.9e-11 Score=126.11 Aligned_cols=143 Identities=21% Similarity=0.241 Sum_probs=78.5
Q ss_pred cccCCCcccCCCCcCCCceee-cccccceEECCCcEEce-eEEeeeEECCCCEECCCCEEcceEEEC-Ccccccccc-cc
Q 009971 374 FYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMG-ADYYETDAD-RR 449 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~-~~~i~~~~Ig~~~~I~~-~~I~~s~ig~~~~Ig~~~~I~~s~i~~-~~~~e~~~~-~~ 449 (521)
++++.+.|...+.++..+.+. ++.|.++.||++|.|+. |.|.+++||++|.|++++.|...+.++ +........ .+
T Consensus 273 ~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~~ 352 (456)
T 2v0h_A 273 EIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKK 352 (456)
T ss_dssp EECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEES
T ss_pred EEcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEec
Confidence 334444444444445555544 44556788888888886 777778888888888777776433333 222111111 22
Q ss_pred ccccCCCc--------ceeeCCCCEEe-eeEECC-------CCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCC
Q 009971 450 FLAAKGSV--------PIGIGKNSHIK-RAIIDK-------NARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDA 513 (521)
Q Consensus 450 ~~~~~~~~--------~~~Ig~~~~i~-~~ii~~-------~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~ 513 (521)
+.++++.. ++.||+++.|. +++|.. +++||++|+|+....+..+.+++++++|++| .+|.++
T Consensus 353 ~~i~~~~~i~~~~~~~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~-s~v~~~- 430 (456)
T 2v0h_A 353 STVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAG-TTITRD- 430 (456)
T ss_dssp CEECTTCEEEEEEEEESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEESEEECTTCEECTT-CEECSC-
T ss_pred cEECCCCEeccceeecCcEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCCcEECCCCEECCC-CEECCC-
Confidence 33333321 23556666554 444432 4555555555555555556788888888888 444333
Q ss_pred EECCCc
Q 009971 514 LIPSGT 519 (521)
Q Consensus 514 ~i~~gs 519 (521)
|++++
T Consensus 431 -v~~~~ 435 (456)
T 2v0h_A 431 -VGENE 435 (456)
T ss_dssp -BCTTC
T ss_pred -cCCCC
Confidence 44444
No 107
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.16 E-value=1.9e-10 Score=112.35 Aligned_cols=106 Identities=16% Similarity=0.208 Sum_probs=70.1
Q ss_pred cceEECCCcEEce-eEE-----eeeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEe----
Q 009971 399 TDSVIGEGCVIKN-CKI-----HHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK---- 468 (521)
Q Consensus 399 ~~~~Ig~~~~I~~-~~I-----~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~---- 468 (521)
.++.|++++.|.. +.+ ....||++|.|++++.|... ..+.||+++ .|+++++|.
T Consensus 62 ~~v~I~~~~~i~~~~~i~~g~~~~v~Ig~~~~I~~~~~i~~g-------------~~v~IG~~~---~Ig~~~~I~~~~~ 125 (252)
T 3jqy_B 62 NKLIIEDDVECRWLTVIFRGDNNYVRIHKNSKIKGDIVATKG-------------SKVIIGRRT---TIGAGFEVVTDKC 125 (252)
T ss_dssp CEEEECTTCEEEEEEEEEESSSCEEEECTTCEEEEEEEEESS-------------CEEEECTTC---EECTTCEEECSSS
T ss_pred CEEEEcCCcEEecceEEEeCCCCeEEECCCCEECCceEEccC-------------CEEEECCCC---EECCCcEEEeCCC
Confidence 4578888888876 444 23455555555555555310 123444454 788888887
Q ss_pred eeEECCCCEECCCcEEeCCC-------------------ccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 469 RAIIDKNARIGDNVKIVNSD-------------------SVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 469 ~~ii~~~~~Ig~~~~i~~~~-------------------~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
++.||++|.||++|+|.+.+ .+++.+.+|.++.|..| ++||++|+|++||+|
T Consensus 126 ~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~g-v~IG~~~~IgagsvV 196 (252)
T 3jqy_B 126 NVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKG-VSVGSGSVIGYGSIV 196 (252)
T ss_dssp EEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTT-CEECTTCEECTTCEE
T ss_pred CeEECCCCEEcCCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECCC-CEECCCCEECCCCEE
Confidence 88999999999999998762 34445555555555555 778888888888764
No 108
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.13 E-value=3.6e-10 Score=103.81 Aligned_cols=101 Identities=16% Similarity=0.230 Sum_probs=76.8
Q ss_pred eEECCCcEEce-eEEe-eeEECCCCEECCCCEEcce---EEECCccccccccccccccCCCcceeeCCCCEEe-----ee
Q 009971 401 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDT---LLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-----RA 470 (521)
Q Consensus 401 ~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s---~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~-----~~ 470 (521)
..|++++.|.. +.+. ++.||++|.|++++.|.+. +.+++ + +.|+++++|. ++
T Consensus 11 ~~i~~~~~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~---------------~---~~I~~~~~I~~~~~~~~ 72 (173)
T 1v3w_A 11 PRIHPSAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGK---------------Y---SNVQDNVSIHTSHGYPT 72 (173)
T ss_dssp CEECTTCEECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECT---------------T---CEECTTCEEECBTTBCE
T ss_pred CEECCCCEECCCCEEeCCEEECCCCEECCCeEEecCCceEEECC---------------C---CEECCCcEEEecCCCCe
Confidence 34666666665 5554 7899999999999998763 33333 3 4788999987 58
Q ss_pred EECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 471 IIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 471 ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
+|++++.|++++.|.+ ..+++.+.++.++.|..+ ++||++++|++|++|
T Consensus 73 ~Ig~~~~I~~~~~i~~-~~Ig~~~~Ig~~~~i~~~-~~Ig~~~~Ig~~s~V 121 (173)
T 1v3w_A 73 EIGEYVTIGHNAMVHG-AKVGNYVIIGISSVILDG-AKIGDHVIIGAGAVV 121 (173)
T ss_dssp EECSSCEECTTCEEES-CEECSSEEECTTCEECTT-CEECSSEEECTTCEE
T ss_pred EECCCCEECCCCEECC-CEECCCCEECCCCEEeCC-CEECCCCEECCCCEE
Confidence 9999999999999864 566777777777777777 888888888888864
No 109
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.12 E-value=3.2e-10 Score=105.82 Aligned_cols=108 Identities=20% Similarity=0.305 Sum_probs=54.9
Q ss_pred cccCCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEEe-eeEECCCCEECCCCEEcceEEECCcccccccccc
Q 009971 374 FYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRR 449 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~ 449 (521)
++++.+.|...+.+.+++.+. .+.+ .++.||++|.|+. +.|. ++.||++|.|++++.|.+.+.++++
T Consensus 5 ~I~p~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~--------- 75 (192)
T 3mqg_A 5 TIHPTAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDD--------- 75 (192)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTT---------
T ss_pred EECCCcEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCC---------
Confidence 444555554444444444443 2222 3456666666654 5554 3555555555555555444333321
Q ss_pred ccccCCCcceeeCCCCEE----------------eeeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 450 FLAAKGSVPIGIGKNSHI----------------KRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 450 ~~~~~~~~~~~Ig~~~~i----------------~~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
+.||+++.+ .+++|+++|.||.+++|... .+++++++|++|
T Consensus 76 ---------~~ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g------~~Ig~~~~Igag 132 (192)
T 3mqg_A 76 ---------VFCGPSMVFTNVYNPRAAIERKSEYRDTIVRQGATLGANCTVVCG------ATIGRYAFVGAG 132 (192)
T ss_dssp ---------CEECTTCBCCSCSSCBTTBCCGGGCCCEEECTTCEECTTCEECTT------CEECTTCEECTT
T ss_pred ---------CEECCceEEecccCCccccccccccCCcEECCCcEECCCCEECCC------CEECCCCEEcCC
Confidence 234444333 34666666666666666543 445555555555
No 110
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.12 E-value=2.3e-10 Score=118.94 Aligned_cols=122 Identities=16% Similarity=0.139 Sum_probs=80.7
Q ss_pred CCCcccCCCCcCCCceee-cccc-cceEECCCcEEce-eEEeeeEECCCCEECCCCEEcceEEECCcccccccccccccc
Q 009971 377 RSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAA 453 (521)
Q Consensus 377 ~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~~~~I~~-~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~ 453 (521)
+.+.|...+.+.+++.+. ++.| .+++||++|.|+. |.|.+++||+++.|++++.|+++++.++
T Consensus 255 ~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~-------------- 320 (401)
T 2ggo_A 255 SGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAED-------------- 320 (401)
T ss_dssp TTCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTT--------------
T ss_pred CCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCC--------------
Confidence 333333334444444443 4444 3688999999998 8888999999999999999988777665
Q ss_pred CCCcceeeCCCCEEee---------eEEC----------CCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCE
Q 009971 454 KGSVPIGIGKNSHIKR---------AIID----------KNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDAL 514 (521)
Q Consensus 454 ~~~~~~~Ig~~~~i~~---------~ii~----------~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~ 514 (521)
+.||++++|.+ +.++ .+++||++|+|.....+.++.++|++++|++| .+|-++
T Consensus 321 -----~~Ig~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~gv~Ig~~~vi~~g-svv~~~-- 392 (401)
T 2ggo_A 321 -----VNFGAGTLIANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPGVKIGAYARIYPG-AVVNRD-- 392 (401)
T ss_dssp -----CEECTTCEECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTTCEECTTCEECTT-CEECSC--
T ss_pred -----cEECCCcEEcCcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEcCCcEECCCcEECCC-CeEccc--
Confidence 45666666641 2222 25566666666655555667788888888888 555554
Q ss_pred ECCCcc
Q 009971 515 IPSGTI 520 (521)
Q Consensus 515 i~~gsv 520 (521)
|+++++
T Consensus 393 vp~~~~ 398 (401)
T 2ggo_A 393 VGYGEF 398 (401)
T ss_dssp BCTTCE
T ss_pred cCCCcE
Confidence 566665
No 111
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.10 E-value=5e-10 Score=106.92 Aligned_cols=20 Identities=10% Similarity=0.008 Sum_probs=11.1
Q ss_pred EEecCCHHHHHHHhhhcccC
Q 009971 347 WEDIGTIEAFYNANLGITKK 366 (521)
Q Consensus 347 w~dIgt~edy~~An~~ll~~ 366 (521)
+.-|++++...+....+...
T Consensus 75 ~iAIg~~~~R~~i~~~l~~~ 94 (220)
T 4ea9_A 75 FVAIGDNRLRQKLGRKARDH 94 (220)
T ss_dssp EECCCCHHHHHHHHHHHHHT
T ss_pred EEecCCHHHHHHHHHHHHhc
Confidence 44566766655555555443
No 112
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.10 E-value=7.4e-11 Score=118.05 Aligned_cols=19 Identities=16% Similarity=0.233 Sum_probs=8.9
Q ss_pred eEECCCCEECCCCEEcceE
Q 009971 417 SVVGLRSCISEGAIIEDTL 435 (521)
Q Consensus 417 s~ig~~~~Ig~~~~I~~s~ 435 (521)
++||.+|.||++|.|....
T Consensus 171 ~~Ig~~~~IG~~v~I~~~~ 189 (304)
T 3eg4_A 171 ATVGSCAQIGKNVHLSGGV 189 (304)
T ss_dssp EEECTTCEECTTCEECTTC
T ss_pred cEECCCCccCCCcEECCCC
Confidence 4444444444444444433
No 113
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.09 E-value=2.6e-10 Score=114.15 Aligned_cols=16 Identities=38% Similarity=0.630 Sum_probs=6.6
Q ss_pred eEECCCCEECCCcEEe
Q 009971 470 AIIDKNARIGDNVKIV 485 (521)
Q Consensus 470 ~ii~~~~~Ig~~~~i~ 485 (521)
++||++|.||.+++|.
T Consensus 203 v~IGd~v~IG~~a~I~ 218 (304)
T 3eg4_A 203 TIIEDNCFIGARSEVV 218 (304)
T ss_dssp CEECTTCEECTTCEEC
T ss_pred eEEcCCCEECCCCEEc
Confidence 3444444444444443
No 114
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.09 E-value=5e-10 Score=106.42 Aligned_cols=100 Identities=12% Similarity=0.090 Sum_probs=68.1
Q ss_pred EECCCcEEce-eEEe-eeEECCCCEECCCCEEcce----EEECCccccccccccccccCCCcceeeCCCCEEee------
Q 009971 402 VIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDT----LLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR------ 469 (521)
Q Consensus 402 ~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s----~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~------ 469 (521)
.|+++++|.. |.|. ++.||++|.|+++|.|.+. +.+|+ + +.|+++++|..
T Consensus 41 ~i~~~~~I~~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~---------------~---~~Ig~~~~I~~~~~~~~ 102 (213)
T 3kwd_A 41 EIAPTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGS---------------R---TNIQDGVVIHGLQQGRV 102 (213)
T ss_dssp EECTTCEECTTSEEEESEEECTTCEECTTCEEEESSSCCEEECT---------------T---CEECTTCEEEECSSCCE
T ss_pred cCCCCCEECCCCEEeCceEECCCCEEcCCcEEecCCCCceEECC---------------C---CEECCCCEEEecCCCce
Confidence 4555566655 4444 6899999999999988653 33332 3 37777777763
Q ss_pred ---------eEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 470 ---------AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 470 ---------~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
++||+++.||.++.|.+...+++.+.+|.++.|. + ++||++|+|++|++|
T Consensus 103 ig~~~~~~~~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~-~-~~Ig~~~~Igags~V 161 (213)
T 3kwd_A 103 IGDDGQEYSVWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVF-N-ARVGAGCVVMMHVLI 161 (213)
T ss_dssp ECTTSCEESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEE-E-EEECTTCEECSSCEE
T ss_pred eccCCcccceEECCCcEECCCcEEcCCCEECCCCEECCCCEEe-C-cEECCCCEEcCCCEE
Confidence 7788888888887777555555555555555554 2 678888888888875
No 115
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.09 E-value=4.1e-10 Score=109.07 Aligned_cols=116 Identities=13% Similarity=0.184 Sum_probs=63.3
Q ss_pred cccCCCcccCCCCcCCCceeecccccceEECCCcEEce-eEEe-eeEECCCCEECCCCEEcceEEECCcccccccccccc
Q 009971 374 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFL 451 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~ 451 (521)
.+++.+.+...+.+.+++.+. .+++|+.+|.|++ |.|. +++|+.++.||++|+|+....+.+.....
T Consensus 93 ~I~~~a~I~~~v~Ig~~~~I~----~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~------- 161 (240)
T 3r8y_A 93 RIEPGAIIRDHVEIGDNAVIM----MNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPP------- 161 (240)
T ss_dssp EECTTCEEBSSCEECTTCEEC----TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCT-------
T ss_pred EECCCCEECCCcEECCCCEEC----CCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCC-------
Confidence 334444444444444444442 3344444444444 4444 55666666666666665444443321100
Q ss_pred ccCCCcceeeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 452 AAKGSVPIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 452 ~~~~~~~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
..-|+.||+++.|. +++|.++++||++++|.....+.+. +.+++++...
T Consensus 162 ---~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~gsvV~~~--vp~~~v~~G~ 211 (240)
T 3r8y_A 162 ---SAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTED--VPPYTVVAGT 211 (240)
T ss_dssp ---TSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECSC--BCTTEEEEET
T ss_pred ---CCCCcEECCCCEECCCCEECCCcEECCCCEECCCCEECCC--cCCCcEEEcc
Confidence 11236788888886 7888888888888888776555543 4555555444
No 116
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.05 E-value=7.7e-10 Score=107.65 Aligned_cols=101 Identities=12% Similarity=0.169 Sum_probs=57.9
Q ss_pred eEECCCcEEce-eEEe-eeEECCCCEECCCCEEcceE----EECCccccccccccccccCCCcceeeCCCCEEe------
Q 009971 401 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTL----LMGADYYETDADRRFLAAKGSVPIGIGKNSHIK------ 468 (521)
Q Consensus 401 ~~Ig~~~~I~~-~~I~-~s~ig~~~~Ig~~~~I~~s~----i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~------ 468 (521)
..|+++++|.. |.|. ++.||++|.|+++|.|.+.. .+|+ + +.|+++++|.
T Consensus 60 ~~I~~~~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~---------------~---~~Ig~~~~I~~~~~~~ 121 (247)
T 1qre_A 60 PVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGD---------------R---SNVQDGVVLHALETIN 121 (247)
T ss_dssp CEECTTCEECTTCEEEESEEECTTCEECTTCEEEESSSCCEEECT---------------T---CEECTTCEEEECCSBC
T ss_pred cEECCCcEECCCCEEeCCcEECCCCEECCCcEEecCCCCCEEECC---------------C---CEECCCeEEEeccccc
Confidence 34566666665 5554 67888888888888876542 3332 2 2555555554
Q ss_pred ------------------eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEECCCccC
Q 009971 469 ------------------RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 521 (521)
Q Consensus 469 ------------------~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i~~gsvi 521 (521)
+++||+++.||+++.|.+...+++.+.+|.++.|.. ++||++++|++|++|
T Consensus 122 ~~g~~~~~~~~~~~~~~~~v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~--v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 122 EEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFK--SKVGNNCVLEPRSAA 190 (247)
T ss_dssp TTSCBCGGGCEEETTEEESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEE--EEECTTCEECTTCEE
T ss_pred ccCcccccceeeccCccCceEECCCCEECCCCEEcCCcEECCCCEECCCCEEec--eEECCCCEECCCCEE
Confidence 266666666666666654334444444444444433 455666666665543
No 117
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.99 E-value=3e-10 Score=112.73 Aligned_cols=47 Identities=17% Similarity=0.272 Sum_probs=28.0
Q ss_pred eeCCCCEEee---------eEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEE
Q 009971 460 GIGKNSHIKR---------AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALI 515 (521)
Q Consensus 460 ~Ig~~~~i~~---------~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i 515 (521)
.|+++++|.. ++||++|.||.|++| +.+||++|+|++| ++|.+++.|
T Consensus 238 ~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI--------GVtIGd~~iIGAG-SVVtkdt~I 293 (347)
T 3r5d_A 238 DLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI--------GIPLGDRNIVEAG-LYITAGTKV 293 (347)
T ss_dssp EECTTCEECC------CCCCEECTTCEECTTCEE--------CSCBCTTCEECTT-CEECTTCEE
T ss_pred EECCCCEEccccCCCCccceEECCCCEECCCCEE--------eeEECCCCEECCC-CEECCCCEE
Confidence 5666666643 566667777776666 2455556666666 555555544
No 118
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.98 E-value=1.8e-09 Score=108.48 Aligned_cols=28 Identities=21% Similarity=0.222 Sum_probs=13.2
Q ss_pred eeeCCCCEEe-eeEECCCCEECCCcEEeC
Q 009971 459 IGIGKNSHIK-RAIIDKNARIGDNVKIVN 486 (521)
Q Consensus 459 ~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~ 486 (521)
+.||++|.|. +|+|.++++||++|+|..
T Consensus 219 v~IGd~v~IG~~a~I~~gv~IG~g~vIga 247 (316)
T 3tk8_A 219 VIIEDNCFIGARSEVVEGVIVEENSVISM 247 (316)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred cEECCCCEECCCCEEcCCCEECCCCEEcC
Confidence 3445444443 444444444444444443
No 119
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.97 E-value=2.3e-09 Score=106.49 Aligned_cols=15 Identities=13% Similarity=0.368 Sum_probs=8.4
Q ss_pred EEECCCCEECCCccC
Q 009971 507 VTIIKDALIPSGTII 521 (521)
Q Consensus 507 v~I~~~~~i~~gsvi 521 (521)
++||++|+|++|++|
T Consensus 273 VtIGd~~iIGAGSVV 287 (347)
T 3r5d_A 273 IPLGDRNIVEAGLYI 287 (347)
T ss_dssp SCBCTTCEECTTCEE
T ss_pred eEECCCCEECCCCEE
Confidence 455566666665553
No 120
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.97 E-value=1.2e-09 Score=106.70 Aligned_cols=83 Identities=22% Similarity=0.316 Sum_probs=50.5
Q ss_pred cceEECCCcEEce-eEEe---eeEECCCCEECCCCEEcc---eEEECCccccccccccccccCCCcceeeCCCCEEee--
Q 009971 399 TDSVIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIED---TLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR-- 469 (521)
Q Consensus 399 ~~~~Ig~~~~I~~-~~I~---~s~ig~~~~Ig~~~~I~~---s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~-- 469 (521)
.++.||++|.|.+ +.|. +++||++|.|+++|.|.. .+.+++ + +.||++++|.+
T Consensus 84 ~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~---------------~---~~Ig~~~~I~~~~ 145 (252)
T 3jqy_B 84 NYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGH---------------D---CMIARDVILRASD 145 (252)
T ss_dssp CEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECT---------------T---CEECSSEEEECSC
T ss_pred CeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECC---------------C---CEEcCCcEEecCC
Confidence 4467777777776 6663 577777777777777763 222222 1 36666666654
Q ss_pred ------------------eEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 470 ------------------AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 470 ------------------~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
++|+++|.||++++|.. ++++|++++|++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~------gv~IG~~~~Igag 193 (252)
T 3jqy_B 146 GHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMK------GVSVGSGSVIGYG 193 (252)
T ss_dssp SSCEEETTTCBBCCCCCCEEECSSCEECSSEEECT------TCEECTTCEECTT
T ss_pred CcccccccccccccccCCeEEecCcEECCCCEECC------CCEECCCCEECCC
Confidence 36666666666666654 3455555555555
No 121
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.97 E-value=2e-09 Score=102.38 Aligned_cols=27 Identities=11% Similarity=0.134 Sum_probs=15.2
Q ss_pred eEECCCcEEce-eEEee----eEECCCCEECC
Q 009971 401 SVIGEGCVIKN-CKIHH----SVVGLRSCISE 427 (521)
Q Consensus 401 ~~Ig~~~~I~~-~~I~~----s~ig~~~~Ig~ 427 (521)
+.||++|.|+. +.+.+ +.||++|.|++
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~ 90 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGN 90 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECS
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECC
Confidence 56666666665 54442 55555555555
No 122
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.97 E-value=5.6e-10 Score=110.00 Aligned_cols=25 Identities=24% Similarity=0.381 Sum_probs=15.6
Q ss_pred eeCCCCEEee---------eEECCCCEECCCcEE
Q 009971 460 GIGKNSHIKR---------AIIDKNARIGDNVKI 484 (521)
Q Consensus 460 ~Ig~~~~i~~---------~ii~~~~~Ig~~~~i 484 (521)
.|+.++.|.. ++||++|.||.|++|
T Consensus 215 ~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtI 248 (332)
T 3fsy_A 215 DVGGGASIMGTLSGGGTHVISIGKRCLLGANSGL 248 (332)
T ss_dssp EECTTCEECSBCC---CCBCEECTTCEECTTCEE
T ss_pred EECCCCEEcCCCCCCCccceEECCCCEECCCCEE
Confidence 5555555542 666666666666666
No 123
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=98.96 E-value=1.3e-09 Score=115.53 Aligned_cols=93 Identities=18% Similarity=0.117 Sum_probs=70.1
Q ss_pred cccCCCcccCCCCcCCCceee-cccccceEECCCcEEce-eEEeeeEECCCCEECCCCEEcceEEECCcccccccccccc
Q 009971 374 FYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFL 451 (521)
Q Consensus 374 ~~~~~~~i~~~~~~~~~~~i~-~~~i~~~~Ig~~~~I~~-~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~ 451 (521)
++++.+.+...+.+++++.+. ++.|.+++||++|.|+. |.|.+++||++|.|++++.|.+++|.++
T Consensus 281 ~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~------------ 348 (496)
T 3c8v_A 281 SVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDM------------ 348 (496)
T ss_dssp EECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEET------------
T ss_pred EECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCC------------
Confidence 566666665566666666665 56667888899999987 8888889999999998888887776665
Q ss_pred ccCCCcceeeCCCCEEee-----eEECCCCEECCCcEEe
Q 009971 452 AAKGSVPIGIGKNSHIKR-----AIIDKNARIGDNVKIV 485 (521)
Q Consensus 452 ~~~~~~~~~Ig~~~~i~~-----~ii~~~~~Ig~~~~i~ 485 (521)
+.||++++|.. ++|+++|.||.++++.
T Consensus 349 -------v~IG~~a~I~~~~~~~v~IG~~a~IGagsvV~ 380 (496)
T 3c8v_A 349 -------IFTGFNSFLQGSESSPLKIGDGCVVMPHTIID 380 (496)
T ss_dssp -------CEECTTCEEECCSSSCEEECTTCEECTTCEEE
T ss_pred -------cEECCCCEEeCCCCcceEECCCCEECCCCEEe
Confidence 57888888873 4777777777777665
No 124
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.96 E-value=2.3e-09 Score=105.99 Aligned_cols=40 Identities=15% Similarity=0.131 Sum_probs=18.3
Q ss_pred eeeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecC
Q 009971 459 IGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETD 498 (521)
Q Consensus 459 ~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~ 498 (521)
+.||++|.|. +|+|.++++||++|+|..+..+.++.++++
T Consensus 178 v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~~~~I~~ 218 (276)
T 3gos_A 178 TIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQSTRIYD 218 (276)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCCEEE
T ss_pred eEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEcc
Confidence 3444444443 444444444444444444444444444333
No 125
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.85 E-value=1.3e-08 Score=100.27 Aligned_cols=9 Identities=33% Similarity=0.065 Sum_probs=4.3
Q ss_pred EEecCCHHH
Q 009971 347 WEDIGTIEA 355 (521)
Q Consensus 347 w~dIgt~ed 355 (521)
-.+.+.++.
T Consensus 123 p~~~~~f~~ 131 (332)
T 3fsy_A 123 PCAIDGFEA 131 (332)
T ss_dssp EEESTTHHH
T ss_pred ccchhHhHH
Confidence 345555544
No 126
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.81 E-value=4.7e-09 Score=98.35 Aligned_cols=51 Identities=14% Similarity=0.117 Sum_probs=35.9
Q ss_pred cCCCCcCCCceeecccc-cceEECCCcEEce-eEEe---eeEECCCCEECCCCEEcceE
Q 009971 382 YTQPRYLPPSKMLDADV-TDSVIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIEDTL 435 (521)
Q Consensus 382 ~~~~~~~~~~~i~~~~i-~~~~Ig~~~~I~~-~~I~---~s~ig~~~~Ig~~~~I~~s~ 435 (521)
...+.+.+|... .+ .++.||++|+|+. |.|. ..+||++|.||++|.|....
T Consensus 60 g~~~~I~~p~~~---~ig~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~ 115 (195)
T 3nz2_A 60 GHKSCVQPPFHC---EFGKTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTAS 115 (195)
T ss_dssp CTTCEECSSEEE---SCSTTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEE
T ss_pred CCCcEEcCCeEE---EeCCCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCC
Confidence 344555565432 12 3678888888886 7775 35899999999999997655
No 127
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.81 E-value=1.4e-08 Score=96.45 Aligned_cols=18 Identities=22% Similarity=0.342 Sum_probs=9.0
Q ss_pred eeEECCCCEECCCcEEeC
Q 009971 469 RAIIDKNARIGDNVKIVN 486 (521)
Q Consensus 469 ~~ii~~~~~Ig~~~~i~~ 486 (521)
+++||++|.||+++.|.+
T Consensus 100 ~i~IG~~~~Ig~~~~I~~ 117 (215)
T 2wlg_A 100 KISIGKDCMLAHGYEIRN 117 (215)
T ss_dssp EEEECTTCEECTTEEEES
T ss_pred CEEECCCCEEcCCEEEEC
Confidence 344555555555555543
No 128
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.81 E-value=1.9e-08 Score=94.09 Aligned_cols=29 Identities=14% Similarity=0.423 Sum_probs=13.5
Q ss_pred ECCCcEEce---eEEe-eeEECCCCEECCCCEE
Q 009971 403 IGEGCVIKN---CKIH-HSVVGLRSCISEGAII 431 (521)
Q Consensus 403 Ig~~~~I~~---~~I~-~s~ig~~~~Ig~~~~I 431 (521)
+++++.|.. |.+. ++.||+++.|+++|.|
T Consensus 59 ig~~~~I~~p~~~~ig~~v~IG~~~~I~~~~~i 91 (195)
T 3nz2_A 59 LGHKSCVQPPFHCEFGKTIRIGDHTFINMNVVM 91 (195)
T ss_dssp ECTTCEECSSEEESCSTTEEECTTCEECTTEEE
T ss_pred cCCCcEEcCCeEEEeCCCeEECCCcEECcCCEE
Confidence 556666654 2222 3444444444444444
No 129
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.80 E-value=9.5e-09 Score=96.54 Aligned_cols=51 Identities=10% Similarity=0.060 Sum_probs=35.0
Q ss_pred CCCCcCCCceeecccccceEECCCcEEce-eEEe---eeEECCCCEECCCCEEcceE
Q 009971 383 TQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIEDTL 435 (521)
Q Consensus 383 ~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~---~s~ig~~~~Ig~~~~I~~s~ 435 (521)
..+.+.+|..+.. -.++.||++|+|+. |.|. .++||++|.||++|.|..+.
T Consensus 59 ~~~~i~~~~~~~~--g~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~ 113 (199)
T 3ftt_A 59 DNVSISIPFDTDY--GWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTAT 113 (199)
T ss_dssp SSEEECSSEEESS--STTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEE
T ss_pred CCeEEeCCEEEEe--cCCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCC
Confidence 3445555555421 13577888888886 7775 36999999999999996554
No 130
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.80 E-value=3.2e-09 Score=101.43 Aligned_cols=31 Identities=26% Similarity=0.388 Sum_probs=17.6
Q ss_pred eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 469 RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 469 ~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
+++||++|.||.+++|.+ +++||++++|++|
T Consensus 119 ~v~IG~~v~IG~~a~I~~------gv~IG~gavIgag 149 (220)
T 4hur_A 119 DIEIGNDVWIGRDVTIMP------GVKIGDGAIIAAE 149 (220)
T ss_dssp CEEECSSCEECTTCEECT------TCEECTTCEECTT
T ss_pred CeEECCCcEECCCCEEeC------CCEECCCCEEcCC
Confidence 455666666666666654 3455555555555
No 131
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.80 E-value=1.6e-08 Score=103.27 Aligned_cols=23 Identities=13% Similarity=0.250 Sum_probs=18.3
Q ss_pred ecceEEecCC--HHHHHHHhhhccc
Q 009971 343 YDGYWEDIGT--IEAFYNANLGITK 365 (521)
Q Consensus 343 ~~g~w~dIgt--~edy~~An~~ll~ 365 (521)
...+|.+.+. |++|......+..
T Consensus 168 ~~~~Wt~~G~~~~~~f~~~~~~l~~ 192 (387)
T 2rij_A 168 SNVAWSDDKPIELEYLRANEMRLKM 192 (387)
T ss_dssp CCEEEETTEEECHHHHHHHHHHHHH
T ss_pred ceeeeccCcccCHHHHHHHHHHHHh
Confidence 3468999998 7888888887763
No 132
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.79 E-value=1.6e-08 Score=96.31 Aligned_cols=46 Identities=11% Similarity=0.218 Sum_probs=21.5
Q ss_pred eeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 460 GIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 460 ~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
.||++++|. ++.|+.+++||++|+|.....+.++.+++++++|++|
T Consensus 149 ~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~~~~Ig~~~~igag 195 (220)
T 4ea9_A 149 RLGAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAG 195 (220)
T ss_dssp EECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred EECCCCEECCCCEEcCCCEECCCCEECCCCEEcCCcEECCCCEECCC
Confidence 344444443 3444444444444444443333334455555555555
No 133
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.77 E-value=1.1e-08 Score=95.26 Aligned_cols=52 Identities=12% Similarity=0.040 Sum_probs=35.3
Q ss_pred ccCCCCcCCCceeecccccceEECCCcEEce-eEEee---eEECCCCEECCCCEEcce
Q 009971 381 IYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHH---SVVGLRSCISEGAIIEDT 434 (521)
Q Consensus 381 i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~~---s~ig~~~~Ig~~~~I~~s 434 (521)
+...+.+.+|..+.. -.++.||++++|+. |.|.+ ..||++|.||++|.|...
T Consensus 59 ig~~~~I~~~~~~~~--g~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~ 114 (188)
T 3srt_A 59 VGKQINVEQNIRCDY--GYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTA 114 (188)
T ss_dssp CCSCEEECSCEEESS--STTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECE
T ss_pred cCCCCEEcCCEEEEe--CCCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeC
Confidence 344455666665421 13677888888886 77763 489999999999988654
No 134
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.77 E-value=2.9e-08 Score=92.52 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=34.8
Q ss_pred CCCcCCCceeecccccceEECCCcEEce-eEEe---eeEECCCCEECCCCEEcceEE
Q 009971 384 QPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIEDTLL 436 (521)
Q Consensus 384 ~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~---~s~ig~~~~Ig~~~~I~~s~i 436 (521)
.+.+.||..+.- -.++.||++++|+. |.|. .+.||++|.|+++|.|.++..
T Consensus 64 ~~~I~~~~~~~~--g~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~ 118 (190)
T 3hjj_A 64 KAQINPDFRCDY--GYNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATH 118 (190)
T ss_dssp CCEECSSCEESS--STTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEEC
T ss_pred CcEECCCEEEEe--CCceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCc
Confidence 455556555420 13567788888876 7665 568999999999999976543
No 135
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.76 E-value=3.3e-08 Score=105.93 Aligned_cols=85 Identities=15% Similarity=0.281 Sum_probs=53.1
Q ss_pred eEECCCcEEce-eEEeeeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEee--------eE
Q 009971 401 SVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR--------AI 471 (521)
Q Consensus 401 ~~Ig~~~~I~~-~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~--------~i 471 (521)
++|+++|.|++ +.+.+|+||+++.|++.+.|++++|..+ +.||+++.+.| ++
T Consensus 353 ~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~-------------------v~IG~g~i~~n~dg~~~~~t~ 413 (501)
T 3st8_A 353 TALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEY-------------------SNIGASSVFVNYDGTSKRRTT 413 (501)
T ss_dssp CEECTTCEEEETEEEESCEECTTCEEEESCEEESEEECSS-------------------CEECTTCEEECBCSSSBCCEE
T ss_pred cEEccccccCCeEEEccceecCCcEEeccceecCceEcCC-------------------CEECCCEEEEcccCCcccCCE
Confidence 44555555554 5555555555555555555555554443 37888887743 77
Q ss_pred ECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECC
Q 009971 472 IDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIK 511 (521)
Q Consensus 472 i~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~ 511 (521)
||++|.||.++.|.. ..+||++++|++| .+|-+
T Consensus 414 IGd~~~iG~~~~l~~------~v~Ig~~~~i~ag-s~v~~ 446 (501)
T 3st8_A 414 VGSHVRTGSDTMFVA------PVTIGDGAYTGAG-TVVRE 446 (501)
T ss_dssp ECTTCEECTTCEEES------SEEECTTCEECTT-CEECS
T ss_pred ECCCcEECCCCEEcC------CcEECCCCEECCC-CEECc
Confidence 888888888877775 4677777888777 44433
No 136
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.73 E-value=3.5e-08 Score=92.25 Aligned_cols=46 Identities=15% Similarity=0.141 Sum_probs=21.1
Q ss_pred eeCCCCEEe-eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 460 GIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 460 ~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
.|++++.|. +++|+++|.||.++++.....+++.+.++.+++|..+
T Consensus 133 ~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igagsvv~~~ 179 (194)
T 3bfp_A 133 HVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGGGATLVKN 179 (194)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred EECCCCEECCCcEECCCCEEcCCCEECCCCEECCCCEECCCCEEccc
Confidence 344444444 2444444444444444444444444444444444433
No 137
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.70 E-value=3.5e-08 Score=92.87 Aligned_cols=52 Identities=15% Similarity=0.111 Sum_probs=37.4
Q ss_pred ccCCCCcCCCceeecccccceEECCCcEEce-eEEee---eEECCCCEECCCCEEcce
Q 009971 381 IYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHH---SVVGLRSCISEGAIIEDT 434 (521)
Q Consensus 381 i~~~~~~~~~~~i~~~~i~~~~Ig~~~~I~~-~~I~~---s~ig~~~~Ig~~~~I~~s 434 (521)
+...+.+.||..+.. ..++.||++|+|+. |.|.+ +.||++|.||++|.|...
T Consensus 58 ig~~~~I~~~~~~~~--g~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~ 113 (203)
T 1krr_A 58 VGENAWVEPPVYFSY--GSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVT 113 (203)
T ss_dssp CCSSCEECSCEEESC--STTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESE
T ss_pred cCCCcEEcCCeEEEe--CCCeEECCeeEECCccEEecccceEECCCCEECCCCEEecC
Confidence 344556666654321 24678999999987 77764 799999999999988754
No 138
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.70 E-value=2.9e-08 Score=99.20 Aligned_cols=53 Identities=23% Similarity=0.266 Sum_probs=28.1
Q ss_pred eeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEe-----eeEECCCCEECCCcEEeC
Q 009971 416 HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-----RAIIDKNARIGDNVKIVN 486 (521)
Q Consensus 416 ~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~-----~~ii~~~~~Ig~~~~i~~ 486 (521)
+++||++|.||++|.|...+.+++. +.|++++.+. +++||++|.||.+++|.+
T Consensus 183 gvvIG~~~~IG~~v~I~~~vtIG~~------------------~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilg 240 (313)
T 3q1x_A 183 GVVIGETAIIGEWCRIYQSVTLGAM------------------HFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLG 240 (313)
T ss_dssp TCEECTTCEECSSCEECTTCEEECC------------------CCCCTTCCCCCCSSCSCEECSSCEECTTCEEES
T ss_pred ceEECCCcEECCCCEECCCcEEeCC------------------cEECCCceEcCCCccCCEECCCCEECCCCEECC
Confidence 3566666666666666554443321 1233333332 346666777777666654
No 139
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.67 E-value=2.1e-08 Score=100.22 Aligned_cols=83 Identities=17% Similarity=0.196 Sum_probs=50.1
Q ss_pred eEECCCcEEc--e-eEEe-eeEECCCCEECCCCEEcceEEEC-CccccccccccccccCCCcceeeCCCCEEe-eeEECC
Q 009971 401 SVIGEGCVIK--N-CKIH-HSVVGLRSCISEGAIIEDTLLMG-ADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDK 474 (521)
Q Consensus 401 ~~Ig~~~~I~--~-~~I~-~s~ig~~~~Ig~~~~I~~s~i~~-~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~ 474 (521)
+.||++++|+ . +.|+ +++||++|.|+++++|++....+ +........+...||+++ .||.+++|. ++.||+
T Consensus 170 a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v---~IGaga~Ilggv~IG~ 246 (313)
T 3q1x_A 170 ASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYV---TIGTGAKVLGNIIVGS 246 (313)
T ss_dssp CEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSC---EECTTCEEESSCEECS
T ss_pred CEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCC---EECCCCEECCCcEECC
Confidence 4456666663 2 5666 68999999999999987644433 222222223444565555 566666654 566666
Q ss_pred CCEECCCcEEeC
Q 009971 475 NARIGDNVKIVN 486 (521)
Q Consensus 475 ~~~Ig~~~~i~~ 486 (521)
+|.||+++++..
T Consensus 247 ~a~IGagsvV~~ 258 (313)
T 3q1x_A 247 HVRIGANCWIDR 258 (313)
T ss_dssp SEEECTTCEECS
T ss_pred CCEECCCCEECC
Confidence 666666666643
No 140
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.67 E-value=1.7e-07 Score=88.09 Aligned_cols=33 Identities=24% Similarity=0.235 Sum_probs=16.6
Q ss_pred CCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 473 DKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 473 ~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
+.+++||++|+|.....+.++++||++++|++|
T Consensus 129 ~~~v~IGd~v~IG~~a~I~~gv~IG~~~vIgag 161 (203)
T 1krr_A 129 SFPITIGNNVWIGSHVVINPGVTIGDNSVIGAG 161 (203)
T ss_dssp ECCEEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred CCCcEECCCeEECCCCEEeCCeEECCCCEECCC
Confidence 344455555555443333344555555666655
No 141
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.64 E-value=5.7e-08 Score=101.68 Aligned_cols=66 Identities=21% Similarity=0.296 Sum_probs=53.3
Q ss_pred eEECCCcEEce------eEEeeeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEeeeEECC
Q 009971 401 SVIGEGCVIKN------CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDK 474 (521)
Q Consensus 401 ~~Ig~~~~I~~------~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~ 474 (521)
+.|.+++.|+. +.+.++.||++|.| +++.|.+++|..+ +.||+++.|.+|+|++
T Consensus 303 ~~i~~~~~i~~~~~~~~~~i~~~~ig~~~~I-~~~~i~~~~ig~~-------------------~~I~~~~~i~~~~i~~ 362 (420)
T 3brk_X 303 AEITPPAKFVHDDEDRRGSAVSSVVSGDCII-SGAALNRSLLFTG-------------------VRANSYSRLENAVVLP 362 (420)
T ss_dssp CCCCCCCEEECBCSSCBCEEESCEECSSCEE-ESCEEESCEECTT-------------------CEECTTCEEEEEEECT
T ss_pred cccCCCcEEecccccCCcEecCCEECCCCEE-cCCEEeCcEEcCC-------------------CEECCCCEEcceEEcC
Confidence 44555666652 56668888888888 8888887777665 5899999999999999
Q ss_pred CCEECCCcEEeC
Q 009971 475 NARIGDNVKIVN 486 (521)
Q Consensus 475 ~~~Ig~~~~i~~ 486 (521)
+|.||+++.|.+
T Consensus 363 ~~~i~~~~~i~~ 374 (420)
T 3brk_X 363 SVKIGRHAQLSN 374 (420)
T ss_dssp TCEECTTCEEEE
T ss_pred CCEECCCCEEec
Confidence 999999999975
No 142
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.63 E-value=2.1e-08 Score=95.70 Aligned_cols=33 Identities=30% Similarity=0.410 Sum_probs=19.0
Q ss_pred eeeCCCCEEe-eeEECCCCEECCCcEEeCCCccC
Q 009971 459 IGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQ 491 (521)
Q Consensus 459 ~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~ 491 (521)
+.||+++.|. +|+|..+++||++|+|.....+.
T Consensus 120 v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~ 153 (220)
T 4hur_A 120 IEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 153 (220)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCcEECCCCEEeCCCEECCCCEEcCCCEEc
Confidence 4566666665 56666666666666665544333
No 143
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.62 E-value=4.7e-08 Score=90.42 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=28.6
Q ss_pred cceEECCCcEEce-eEEe---eeEECCCCEECCCCEEcce
Q 009971 399 TDSVIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIEDT 434 (521)
Q Consensus 399 ~~~~Ig~~~~I~~-~~I~---~s~ig~~~~Ig~~~~I~~s 434 (521)
.++.||++|+|+. |.|. ...||++|.|+++|.|...
T Consensus 71 ~~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~ 110 (182)
T 1ocx_A 71 YNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTA 110 (182)
T ss_dssp TTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECE
T ss_pred CCEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeC
Confidence 4577888888886 7774 5789999999999988754
No 144
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.61 E-value=5e-08 Score=103.02 Aligned_cols=100 Identities=19% Similarity=0.182 Sum_probs=71.4
Q ss_pred cceEECCCcEEceeEEeeeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEeeeEECCC---
Q 009971 399 TDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKN--- 475 (521)
Q Consensus 399 ~~~~Ig~~~~I~~~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~--- 475 (521)
.++.|+++++|.++.|.+++||++|.|+. |.|.+++|..+ +.||++++|.++++..+
T Consensus 313 ~~~~i~~~~~i~~~~I~~~~Ig~~~~I~~-~~i~~~~Ig~~-------------------~~Ig~~~~I~~~~~~~~~~~ 372 (451)
T 1yp2_A 313 TQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHHSVVGLR-------------------SCISEGAIIEDSLLMGADYY 372 (451)
T ss_dssp CCCCCCCCEEEEEEEEEEEEECTTCEEEE-EEEESCEECTT-------------------CEECTTCEEESCEECCCSSC
T ss_pred cCCccCCCeEEcceEEeCeEECCCCEEcc-eEEeccEECCC-------------------CEECCCCEEcCceEECCCCc
Confidence 35667777777547777788888888875 77776666554 58999999987766666
Q ss_pred ----------------CEECCCcEEeCCCccCCceeecCCeEEcCCe-----EEECCCCEECCCc
Q 009971 476 ----------------ARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----VTIIKDALIPSGT 519 (521)
Q Consensus 476 ----------------~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~-----v~I~~~~~i~~gs 519 (521)
+.||+++.|.+ ..+++.+.||++++|..+. .+||+++.||+|+
T Consensus 373 ~~~~~~~~~~~~g~~~~~Ig~~~~i~~-~~Ig~~~~IG~~~~i~~~~~~~~~~~ig~~~~ig~~~ 436 (451)
T 1yp2_A 373 ETDADRKLLAAKGSVPIGIGKNCHIKR-AIIDKNARIGDNVKIINKDNVQEAARETDGYFIKSGI 436 (451)
T ss_dssp CCHHHHHHHHTTTCCCSEECTTCEEES-EEECTTCEECTTCEECCSSCCSCEEEGGGTEEEETTE
T ss_pred ccccccccccccCceeEEECCCCEEec-cEeCCCcEECCCCEEeCCcccccCceeCCCEEEcCCE
Confidence 89999988864 5667777777777776541 2566666666665
No 145
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.61 E-value=1.8e-07 Score=87.77 Aligned_cols=72 Identities=18% Similarity=0.214 Sum_probs=36.4
Q ss_pred eeEECCCCEECCCCEEcce--EEECCccccccccccccccCCCcceeeCCCCEEee-------------eEECCCCEECC
Q 009971 416 HSVVGLRSCISEGAIIEDT--LLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR-------------AIIDKNARIGD 480 (521)
Q Consensus 416 ~s~ig~~~~Ig~~~~I~~s--~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~-------------~ii~~~~~Ig~ 480 (521)
++.||++|.|+++|.|.+. +.+|++ +.||+++.|.. ..++..++||+
T Consensus 74 ~~~IG~~~~I~~~~~i~~~~~v~IG~~------------------v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 135 (199)
T 3ftt_A 74 NVKLGKNVYVNTNCYFMDGGQITIGDN------------------VFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGS 135 (199)
T ss_dssp TEEECSSEEECTTEEEECSSCEEECSS------------------EEECTTCEEECEECCSSHHHHHTTEEEECCEEECS
T ss_pred CcEECCCeEECCCeEEecCCEEEECCC------------------CEECCCCEEecCCCcCccccccccceecCCeEEcC
Confidence 5666666666666666433 333321 46677776632 12334444444
Q ss_pred CcEEeCCCccCCceeecCCeEEcCC
Q 009971 481 NVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 481 ~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
+|+|.....+.++++||++++|++|
T Consensus 136 ~v~IG~~~~I~~gv~IG~~~vIgag 160 (199)
T 3ftt_A 136 NTWFGGHVAVLPGVTIGEGSVIGAG 160 (199)
T ss_dssp SEEECTTCEECTTCEECTTCEECTT
T ss_pred CcEEcCCCEECCCCEECCCCEECCC
Confidence 4444443333334455555555555
No 146
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.61 E-value=1.4e-07 Score=87.72 Aligned_cols=85 Identities=20% Similarity=0.207 Sum_probs=49.8
Q ss_pred ECC-CcEEce-eEE--e-eeEECCCCEECCCCEEcc--eEEECCccccccccccccccCCCcceeeCCCCEEee------
Q 009971 403 IGE-GCVIKN-CKI--H-HSVVGLRSCISEGAIIED--TLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR------ 469 (521)
Q Consensus 403 Ig~-~~~I~~-~~I--~-~s~ig~~~~Ig~~~~I~~--s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~------ 469 (521)
+++ ++.|.. +.+ . ++.||+++.|+++|.|.+ .+.+|+ + +.||++++|..
T Consensus 60 ~~~~~~~I~~~~~~~~g~~v~IG~~~~I~~~~~i~~~~~v~IG~---------------~---~~Ig~~~~I~~~~~~~~ 121 (190)
T 3hjj_A 60 SADGKAQINPDFRCDYGYNIHVGKSFFANFNCVILDVCEVRIGD---------------H---CMFAPGVHIYTATHPLH 121 (190)
T ss_dssp ESSSCCEECSSCEESSSTTEEECTTCEECTTCEEECSSCEEECT---------------T---CEECTTCEEECEECCSS
T ss_pred cCCCCcEECCCEEEEeCCceEECCceeeCCCeEEEeCCCeEECC---------------c---eEEcCCcEEecCCccCc
Confidence 455 555554 322 3 688888888888888874 333333 2 37777777732
Q ss_pred -------eEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 470 -------AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 470 -------~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
+.++.+++||++|+|.....+.++++||++++|++|
T Consensus 122 ~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgag 164 (190)
T 3hjj_A 122 PVERNSGKEYGKPVKIGNNVWVGGGAIINPGVSIGDNAVIASG 164 (190)
T ss_dssp HHHHTSSEEEECCEEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred hhhccccccccCCeEECCCCEECCCCEECCCCEECCCCEECCC
Confidence 233455556666555554444445555666666666
No 147
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.60 E-value=3.5e-07 Score=84.93 Aligned_cols=85 Identities=20% Similarity=0.234 Sum_probs=43.0
Q ss_pred ECCCcEEce-eEE---eeeEECCCCEECCCCEEcce--EEECCccccccccccccccCCCcceeeCCCCEEe--------
Q 009971 403 IGEGCVIKN-CKI---HHSVVGLRSCISEGAIIEDT--LLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-------- 468 (521)
Q Consensus 403 Ig~~~~I~~-~~I---~~s~ig~~~~Ig~~~~I~~s--~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~-------- 468 (521)
+++++.|.. ..+ .++.||+++.|+.+|.|.+. +.+|+ + +.||++++|.
T Consensus 59 ig~~~~I~~~~~~~~g~~~~IG~~~~i~~~~~i~~~~~i~IG~---------------~---~~Ig~~v~I~~~~h~~~~ 120 (188)
T 3srt_A 59 VGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIGD---------------N---VMLAPNVQIYTAYHPIDA 120 (188)
T ss_dssp CCSCEEECSCEEESSSTTEEECTTEEECTTEEEECSSCEEECS---------------S---CEECTTCEEECEECCSSH
T ss_pred cCCCCEEcCCEEEEeCCCeEECCcccccCceEEecCCceEECC---------------e---eEECCCcEEeeCCccCch
Confidence 344444443 222 25677777777777776542 23332 2 3677777762
Q ss_pred -----eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 469 -----RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 469 -----~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
++.++..++||++|+|.....+.++.+||++++|++|
T Consensus 121 ~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgag 162 (188)
T 3srt_A 121 QLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVVIGAG 162 (188)
T ss_dssp HHHHTTEEEECCEEECSSCEECTTCEECTTCEECSSEEECTT
T ss_pred hhccccceECCCcEECCCcEEcCCCEECCCcEECCCCEECCC
Confidence 1222344444444444443333334555556666665
No 148
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.59 E-value=3.1e-07 Score=85.14 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=29.1
Q ss_pred cceEECCCcEEce-eEE---eeeEECCCCEECCCCEEcce
Q 009971 399 TDSVIGEGCVIKN-CKI---HHSVVGLRSCISEGAIIEDT 434 (521)
Q Consensus 399 ~~~~Ig~~~~I~~-~~I---~~s~ig~~~~Ig~~~~I~~s 434 (521)
.++.||++++|+. |.| .+..||++|.|+++|.|.+.
T Consensus 73 ~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~ 112 (185)
T 2p2o_A 73 YNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTA 112 (185)
T ss_dssp TTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECE
T ss_pred CCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcC
Confidence 4677888888886 777 36799999999999999754
No 149
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.59 E-value=7.3e-08 Score=89.38 Aligned_cols=13 Identities=31% Similarity=0.309 Sum_probs=6.5
Q ss_pred ceeecCCeEEcCC
Q 009971 493 AARETDGYFIKSG 505 (521)
Q Consensus 493 ~~~~~~~~~I~~g 505 (521)
+++||++++|++|
T Consensus 148 gv~IG~~~vIgag 160 (185)
T 2p2o_A 148 GVTIGDNAVIASG 160 (185)
T ss_dssp TCEECTTCEECTT
T ss_pred CCEECCCCEECCC
Confidence 3444555555555
No 150
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.58 E-value=9.4e-08 Score=94.14 Aligned_cols=79 Identities=18% Similarity=0.291 Sum_probs=41.3
Q ss_pred EECCCcEEceeEEeeeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEe-eeEECCCCEECC
Q 009971 402 VIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKNARIGD 480 (521)
Q Consensus 402 ~Ig~~~~I~~~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~~Ig~ 480 (521)
.||++|+|+.. .+++||++|.||++|.|...+.+++...+. ..+.+.||+++ .||.+++|. ++.||++|.||+
T Consensus 172 ~IG~~v~I~hg--~gvvIG~~~~IGd~v~I~~gvtIg~~~~~~-~~r~~~IGd~v---~IGaga~Il~gv~IG~~a~IGa 245 (287)
T 3mc4_A 172 RLGSGLFLDHA--TGLVVGETAVVEDNVSILHGVTLGGTGKSS-GDRHPKIRQGV---LIGAGAKILGNIQVGQCSKIAA 245 (287)
T ss_dssp EECSSCEEESC--TTCEECTTCEECSSCEEETTCEEEC------CCCSCEECTTC---EECTTCEEESSCEECTTCEECT
T ss_pred EECCCeEEccC--CCeEECCCeEECCCCEEcCCCEEcCCcccC-CCcCCEECCCC---EECCCCEECCCcEECCCCEECC
Confidence 44555555420 145666666666666666554444321111 12345555555 566666665 566666666666
Q ss_pred CcEEeC
Q 009971 481 NVKIVN 486 (521)
Q Consensus 481 ~~~i~~ 486 (521)
++++..
T Consensus 246 gsvV~k 251 (287)
T 3mc4_A 246 GSVVLK 251 (287)
T ss_dssp TCEECS
T ss_pred CCEEcc
Confidence 666653
No 151
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.58 E-value=2.4e-07 Score=91.26 Aligned_cols=78 Identities=17% Similarity=0.244 Sum_probs=42.0
Q ss_pred ceEECCCcEEceeEEeeeEEC--CCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEE---eeeEECC
Q 009971 400 DSVIGEGCVIKNCKIHHSVVG--LRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHI---KRAIIDK 474 (521)
Q Consensus 400 ~~~Ig~~~~I~~~~I~~s~ig--~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i---~~~ii~~ 474 (521)
++.|++++.|++ ++.|+ .++.||++|+|++.+.++.. +.||.+... ++++||+
T Consensus 164 gi~I~p~a~IG~----~v~I~hg~gvvIG~~~~IGd~v~I~~g------------------vtIg~~~~~~~~r~~~IGd 221 (287)
T 3mc4_A 164 QTDIHPAARLGS----GLFLDHATGLVVGETAVVEDNVSILHG------------------VTLGGTGKSSGDRHPKIRQ 221 (287)
T ss_dssp CCEECTTCEECS----SCEEESCTTCEECTTCEECSSCEEETT------------------CEEEC-----CCCSCEECT
T ss_pred CeEECCCCEECC----CeEEccCCCeEECCCeEECCCCEEcCC------------------CEEcCCcccCCCcCCEECC
Confidence 456777777774 44444 67777777777655443321 233322111 1256677
Q ss_pred CCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 475 NARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 475 ~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
||.||.+++|... ++||++++|++|
T Consensus 222 ~v~IGaga~Il~g------v~IG~~a~IGag 246 (287)
T 3mc4_A 222 GVLIGAGAKILGN------IQVGQCSKIAAG 246 (287)
T ss_dssp TCEECTTCEEESS------CEECTTCEECTT
T ss_pred CCEECCCCEECCC------cEECCCCEECCC
Confidence 7777777666653 444444555544
No 152
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.57 E-value=1.2e-07 Score=92.78 Aligned_cols=28 Identities=7% Similarity=-0.034 Sum_probs=24.4
Q ss_pred cceEE--EEeCCeeccccHHHHHHHHHhcC
Q 009971 205 VLEFL--VLAGDHLYRMDYERFIQAHRETD 232 (521)
Q Consensus 205 ~~~~L--vl~gD~l~~~dl~~ll~~h~~~~ 232 (521)
.|++| ++++|+|...++.+.+.+|...+
T Consensus 19 ~EP~L~~~l~~~IL~~~~l~~aLa~~la~k 48 (267)
T 1ssq_A 19 NEPMLASFFHSTILKHQNLGGALSYLLANK 48 (267)
T ss_dssp HCHHHHHHHHHHTTTSSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 47899 99999999999999999997654
No 153
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.56 E-value=4.8e-06 Score=87.80 Aligned_cols=346 Identities=14% Similarity=0.116 Sum_probs=181.7
Q ss_pred CCccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhC----CC-ceEEEEecC-ChHHHHHHHHHhhh
Q 009971 86 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNS----NI-SKIYVLTQF-NSASLNRHLSRAYA 159 (521)
Q Consensus 86 ~~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~----gi-~~I~Iv~~~-~~~~i~~~l~~~~~ 159 (521)
.-.++.+|+||||.||||+ ...||.++|+...+++++..++.+... |. -..+|.+.+ ..+...++|++...
T Consensus 124 ~l~kvavvlLaGGlGTRLG---~~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~~~ 200 (528)
T 3r3i_A 124 VLNKLVVVKLNGGLGTSMG---CKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNH 200 (528)
T ss_dssp TCTTEEEEEECCCBCTTTT---CSSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGGTT
T ss_pred hcCceEEEEeCCCCccccC---CCCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhcCc
Confidence 4568999999999999997 578999999973359999999998763 42 245566654 45788888887432
Q ss_pred ccCCC-CcCCCcEEEeecc-cC----------CCCCCC-CCChHHHHHHH-----HHHhhhcCcceEEEEeCCee-cccc
Q 009971 160 SNMGG-YKNEGFVEVLAAQ-QS----------PENPNW-FQGTADAVRQY-----LWLFEEHNVLEFLVLAGDHL-YRMD 220 (521)
Q Consensus 160 ~~~~~-~~~~~~v~vl~~~-q~----------~~~~~~-~~Gt~~al~~~-----~~~l~~~~~~~~Lvl~gD~l-~~~d 220 (521)
++... .|.+..+..+... .. +....| +.|.++-.... ++.+.....+++.+.+.|.+ ...|
T Consensus 201 fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vD 280 (528)
T 3r3i_A 201 CRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVD 280 (528)
T ss_dssp SSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCC
T ss_pred cCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccC
Confidence 22100 1111111111100 00 011123 45665433322 23333346789999999994 4455
Q ss_pred HHHHHHHHHhc----CCcEEEEEEecCcccCcceeEEEe-CCCCCeEEeeeCCChhhhhhcccccccccCCchhhccCCc
Q 009971 221 YERFIQAHRET----DADITVAALPMDEKRATAFGLMKI-DEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPY 295 (521)
Q Consensus 221 l~~ll~~h~~~----~aditi~~~~~~~~~~~~~g~v~~-d~~grV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (521)
.. ++..+.++ ++++.+-+.+.... ...-|.+.. |..-+++++.+-|+..... . + ....-.
T Consensus 281 p~-~Lg~~~~~~~~~~~d~~~kVv~Kt~~-dek~Gvl~~~dGk~~vvEyseip~e~~~~-~---~---------g~~~f~ 345 (528)
T 3r3i_A 281 LY-ILNHLMNPPNGKRCEFVMEVTNKTRA-DVKGGTLTQYEGKLRLVEIAQVPKAHVDE-F---K---------SVSKFK 345 (528)
T ss_dssp HH-HHHHHSSCSSSCCCSEEEEECCCCTT-CCSSCEEECSSSSCEEECTTSSCGGGTTT-S---S---------CSSSCC
T ss_pred HH-HHHHHHhcccccCCcEEEEEeEcccc-CCcccEEEEECCeEEEEEecCCChhHhhc-c---C---------CcccCC
Confidence 33 56666666 78876655543221 123455543 2223577777766543211 0 0 011234
Q ss_pred eeeEEEEEEeHHHHHHHHhhhCCCCC------------------ChhhcchHhhhhCCceEEEEEec-ceEEecCCHHHH
Q 009971 296 IASMGIYVISKDVMLNLLRDKFPGAN------------------DFGSEVIPGATSIGMRVQAYLYD-GYWEDIGTIEAF 356 (521)
Q Consensus 296 l~~~GIyifs~~vl~~ll~~~~~~~~------------------d~~~dil~~li~~~~~I~~~~~~-g~w~dIgt~edy 356 (521)
+.++...+|+-+.++++++....... .+..++++.. .+..++.++ ..|.-+.+..|+
T Consensus 346 ~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f----~~~~~i~VpR~rF~PvKn~sdL 421 (528)
T 3r3i_A 346 IFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSF----ENSLGINVPRSRFLPVKTTSDL 421 (528)
T ss_dssp CCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTS----SSCCCEECCGGGCCBCCSHHHH
T ss_pred eEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhc----cCcEEEEEehHHcccccchHHH
Confidence 68999999999999888875311110 1112222222 123344443 348889999998
Q ss_pred HHHhhhcc--cCCCCCccccccCCCcccCCCCcCCCce-ee--cccccc--eEECCCcEEceeEEeeeEECCCCEECCCC
Q 009971 357 YNANLGIT--KKPIPDFRYFYDRSAPIYTQPRYLPPSK-ML--DADVTD--SVIGEGCVIKNCKIHHSVVGLRSCISEGA 429 (521)
Q Consensus 357 ~~An~~ll--~~~~~~~~~~~~~~~~i~~~~~~~~~~~-i~--~~~i~~--~~Ig~~~~I~~~~I~~s~ig~~~~Ig~~~ 429 (521)
+.....+- .... + ...+...... +|.+ ++ ..+|.+ ..+..--.|-+ ..+-.|--+++.|.++
T Consensus 422 ll~~Sdly~l~~g~--l--~~~~~r~~~~-----~P~v~L~~~~~~v~~f~~rf~~iP~l~~--~~~LtV~Gdv~fg~~v 490 (528)
T 3r3i_A 422 LLVMSNLYSLNAGS--L--TMSEKREFPT-----VPLVKLGSSFTKVQDYLRRFESIPDMLE--LDHLTVSGDVTFGKNV 490 (528)
T ss_dssp HHHHSTTSEEETTE--E--ECCSSCSSCC-----CCEEEECTTSCSHHHHHHHCSSCCEEEE--EEEEEEESEEECCTTC
T ss_pred HHHhcceeEeeCCe--E--EecccccCCC-----CCEEEeCcccCcHHHHHHhCCCCCCccc--CCEEEEecceEECCCc
Confidence 76654432 2110 0 0111110000 1111 11 112211 11222122221 2344566667778888
Q ss_pred EEcceEEECCccccccccccccccCCCcceeeCCCCEEeeeEECCCCEE
Q 009971 430 IIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARI 478 (521)
Q Consensus 430 ~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~I 478 (521)
++.+.+++-++ ...++.|.++++++|.+|..|.+|
T Consensus 491 ~l~G~v~i~~~--------------~g~~~~ip~g~~len~~v~g~~~~ 525 (528)
T 3r3i_A 491 SLKGTVIIIAN--------------HGDRIDIPPGAVLENKIVSGNLRI 525 (528)
T ss_dssp EEEEEEEEECC--------------TTCEEECCTTCEEEEEEEC-----
T ss_pred EEEEEEEEEcC--------------CCCceecCCCCEEeccEEeccccc
Confidence 88888776431 223478999999999988877666
No 154
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.52 E-value=1.7e-07 Score=93.50 Aligned_cols=21 Identities=19% Similarity=0.232 Sum_probs=11.2
Q ss_pred eeEECCCCEECCCCEEcceEE
Q 009971 416 HSVVGLRSCISEGAIIEDTLL 436 (521)
Q Consensus 416 ~s~ig~~~~Ig~~~~I~~s~i 436 (521)
+++||++|.||++|.|...+.
T Consensus 210 gvvIG~~~~IG~~v~I~~gvt 230 (310)
T 3f1x_A 210 GVVIGATSIIGNNVKLYQGVT 230 (310)
T ss_dssp TCEECTTCEECSSCEEETTCE
T ss_pred CeEECCceEEcCCCEECCCCE
Confidence 455555555555555544433
No 155
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.47 E-value=7.3e-07 Score=82.39 Aligned_cols=13 Identities=23% Similarity=0.314 Sum_probs=6.7
Q ss_pred ceeecCCeEEcCC
Q 009971 493 AARETDGYFIKSG 505 (521)
Q Consensus 493 ~~~~~~~~~I~~g 505 (521)
+++||++++|++|
T Consensus 146 gv~IG~~~vIgag 158 (182)
T 1ocx_A 146 GVTIGDNVVVASG 158 (182)
T ss_dssp TCEECTTCEECTT
T ss_pred CcEECCCCEECCC
Confidence 3445555555555
No 156
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.43 E-value=1.4e-07 Score=96.29 Aligned_cols=37 Identities=14% Similarity=0.309 Sum_probs=18.8
Q ss_pred eEECCCCEECCCcEEeCCCccCCceeecCCeEEcCCeEEECCCCEE
Q 009971 470 AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALI 515 (521)
Q Consensus 470 ~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g~v~I~~~~~i 515 (521)
++||++|.||.+++ .+.+||++|+|++| ++|.+++.+
T Consensus 291 VvIGdnv~IGagAv--------~GV~IGdgavIGAG-sVVt~dv~i 327 (387)
T 2rij_A 291 ISVGKACLLGANSV--------TGIPLGDNCIVDAG-IAVLEGTKF 327 (387)
T ss_dssp CEECTTCEECTTCE--------ECSCBCTTCEECTT-CEECTTCEE
T ss_pred eEEeCCCEECCCCc--------CCcEECCCCEECCC-CEECCCcee
Confidence 45555555555554 23445555555555 455554444
No 157
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.42 E-value=4.5e-07 Score=88.62 Aligned_cols=79 Identities=28% Similarity=0.375 Sum_probs=38.2
Q ss_pred eEECCCcEEceeEEeeeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEe-eeEECCCCEEC
Q 009971 401 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKNARIG 479 (521)
Q Consensus 401 ~~Ig~~~~I~~~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~~Ig 479 (521)
+.||++++|++. .+++||++|.||++|.|...+.+++...+. ..+.+.||+++ .||.+++|. ++.||++|+||
T Consensus 144 a~IG~g~~I~~~--~~vvIG~~~~IG~~v~I~~gvtig~~~~~~-~~~~~~IGd~v---~IGaga~Il~gv~IG~~a~IG 217 (267)
T 1ssq_A 144 AKIGHGIMFDHA--TGIVVGETSVIENDVSILQGVTLGGTGKES-GDRHPKVREGV---MIGAGAKILGNIEVGKYAKIG 217 (267)
T ss_dssp CEECSSCEESSC--TTCEECTTCEECTTCEECTTCEEECCSSSC-SSCSCEECTTC---EECTTCEEESSCEECTTCEEC
T ss_pred CEECCCEEECCC--CceEECCeeEECCCCEEcCCcEECCCcccC-CCCCeEECCCe---EEcCCCEEeCCcEECCCCEEC
Confidence 345666666530 034555555555555555444444321110 11234444444 555555554 45555555555
Q ss_pred CCcEEe
Q 009971 480 DNVKIV 485 (521)
Q Consensus 480 ~~~~i~ 485 (521)
+++++.
T Consensus 218 agsvV~ 223 (267)
T 1ssq_A 218 ANSVVL 223 (267)
T ss_dssp TTCEEC
T ss_pred CCCEEc
Confidence 555554
No 158
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.40 E-value=1.2e-06 Score=86.36 Aligned_cols=28 Identities=7% Similarity=-0.022 Sum_probs=24.6
Q ss_pred cceEE--EEeCCeeccccHHHHHHHHHhcC
Q 009971 205 VLEFL--VLAGDHLYRMDYERFIQAHRETD 232 (521)
Q Consensus 205 ~~~~L--vl~gD~l~~~dl~~ll~~h~~~~ 232 (521)
.|++| ++++|+|...+|.+.+.+|.+.+
T Consensus 39 ~EP~L~~~l~~~IL~~~~l~~aLa~~La~k 68 (289)
T 1t3d_A 39 CEPMLASFYHATLLKHENLGSALSYMLANK 68 (289)
T ss_dssp HCGGGHHHHHHHTTTCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 47999 99999999999999999997654
No 159
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.37 E-value=1.2e-06 Score=87.25 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=20.0
Q ss_pred EECCCcEE--ce-eEEe-eeEECCCCEECCCCEEcceE
Q 009971 402 VIGEGCVI--KN-CKIH-HSVVGLRSCISEGAIIEDTL 435 (521)
Q Consensus 402 ~Ig~~~~I--~~-~~I~-~s~ig~~~~Ig~~~~I~~s~ 435 (521)
.||++++| +. ++|+ +++||++|.|+++|+|++..
T Consensus 198 ~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~ 235 (310)
T 3f1x_A 198 QIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKS 235 (310)
T ss_dssp EECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC-
T ss_pred EECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCc
Confidence 34555555 22 4444 56777777777777777654
No 160
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.34 E-value=0.00038 Score=72.87 Aligned_cols=346 Identities=13% Similarity=0.121 Sum_probs=186.7
Q ss_pred CccEEEEEEeCCCCCCCCccccCCCccceecCCCcchhHHHHHHhHh----CCC-ceEEEEecCC-hHHHHHHHHHhhhc
Q 009971 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLN----SNI-SKIYVLTQFN-SASLNRHLSRAYAS 160 (521)
Q Consensus 87 ~~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~----~gi-~~I~Iv~~~~-~~~i~~~l~~~~~~ 160 (521)
-.++.+|+||||.||||+ ...||.++|+...+++++..++.+.. .+. -..+|-+.++ .+...++|++...+
T Consensus 74 L~kvavvlLaGGlGTRLG---~~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~F 150 (484)
T 3gue_A 74 LRQAVVLKLNGGLGTGMG---LNGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPTL 150 (484)
T ss_dssp HTTEEEEEEECCCCGGGT---CSSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHHH
T ss_pred HhhcEEEEEcCCcccccC---CCCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCccc
Confidence 347999999999999997 57899999995445999999988864 232 2556777655 57889999874433
Q ss_pred cCC----CCcCCCcEEEeecccC-C----C--CCCC-CCChHHHHHHH-----HHHhhhcCcceEEEEeCCeeccccHHH
Q 009971 161 NMG----GYKNEGFVEVLAAQQS-P----E--NPNW-FQGTADAVRQY-----LWLFEEHNVLEFLVLAGDHLYRMDYER 223 (521)
Q Consensus 161 ~~~----~~~~~~~v~vl~~~q~-~----~--~~~~-~~Gt~~al~~~-----~~~l~~~~~~~~Lvl~gD~l~~~dl~~ 223 (521)
++. ..|.+..+..+..... + . ...| +.|.++-.... ++.+.....+++.+.+.|.+...-=..
T Consensus 151 gl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~ 230 (484)
T 3gue_A 151 YEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVR 230 (484)
T ss_dssp HTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHH
T ss_pred CCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHH
Confidence 321 1223332332222111 0 0 1113 45776533322 223333467899999999966532245
Q ss_pred HHHHHHhcCCcEEEEEEecCcccCcceeEEEeC---------CCC--CeEEeeeCCChhhhhhcccccccccCCchhhcc
Q 009971 224 FIQAHRETDADITVAALPMDEKRATAFGLMKID---------EEG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKE 292 (521)
Q Consensus 224 ll~~h~~~~aditi~~~~~~~~~~~~~g~v~~d---------~~g--rV~~i~ekp~~~~~~~~~~~~~~~~~~~~~~~~ 292 (521)
++..+.++++++.+-+.+....+ ..-|.+... .+| +++++.+-|+..... .+ + ..
T Consensus 231 ~lG~~~~~~~d~~~kvv~Kt~~d-ekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~~-f~--------~----~~ 296 (484)
T 3gue_A 231 LLDYMHEKQLGFLMEVCRRTESD-KKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDS-FQ--------N----IA 296 (484)
T ss_dssp HHHHHHHTTCSEEEEEEECCTTC-CSSEEEEEEC--------CCCEEEEEEGGGSCGGGHHH-HT--------C----TT
T ss_pred HHHHHHhcCCCEEEEEEECCCCC-CceeEEEEEccccccccCCCCCEEEEEeccCCHHHHhh-hc--------C----CC
Confidence 77888889999887776644322 234543331 234 577777766543211 00 0 01
Q ss_pred CCceeeEEEEEEeHHHHHHHHhhh--CCCCC-------------Ch-----hhcchHhhhhCCceEEEEEec-ceEEecC
Q 009971 293 MPYIASMGIYVISKDVMLNLLRDK--FPGAN-------------DF-----GSEVIPGATSIGMRVQAYLYD-GYWEDIG 351 (521)
Q Consensus 293 ~~~l~~~GIyifs~~vl~~ll~~~--~~~~~-------------d~-----~~dil~~li~~~~~I~~~~~~-g~w~dIg 351 (521)
..-+.+++-.+++-..++++++.. ..... +. .+-.+..+.+.-.+..++.++ ..|.-+.
T Consensus 297 g~~~FNtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~~~~~~ieV~R~rF~PvK 376 (484)
T 3gue_A 297 KHCFFNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLFDRSEAVVVPRERFAPVK 376 (484)
T ss_dssp TSCEEEEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTSSSEEEEECCGGGCCCCS
T ss_pred CceEeEeeeEEEEHHHHHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhCCccEEEEEChhhccccc
Confidence 123558888999988887777653 10000 00 011122222212245566654 4688889
Q ss_pred CHHHHHHHhhhcccCCCCCccccc-cCCCcccCCCCcCCCc-eeec---ccccc--eEECCCc-EEceeEEeeeEECCCC
Q 009971 352 TIEAFYNANLGITKKPIPDFRYFY-DRSAPIYTQPRYLPPS-KMLD---ADVTD--SVIGEGC-VIKNCKIHHSVVGLRS 423 (521)
Q Consensus 352 t~edy~~An~~ll~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~i~~---~~i~~--~~Ig~~~-~I~~~~I~~s~ig~~~ 423 (521)
+..|++.....+-.-. .+.. .. .+.. . ...|. .++. .+|.+ ..+..|. .|-++ .+-+|--++
T Consensus 377 n~sdLl~~~Sdly~l~-~~~~-l~~~~~~-~-----~~~P~v~L~~~~~~~v~~f~~rf~~giPsl~~~--~~L~V~Gdv 446 (484)
T 3gue_A 377 TCSDLLALRSDAYQVT-EDQR-LVLCEER-N-----GKPPAIDLDGEHYKMIDGFEKLVKGGVPSLRQC--TSLTVRGLV 446 (484)
T ss_dssp SHHHHHHHHSTTEEEC-TTSC-EEECGGG-T-----TCCCEEEECTTTSSSHHHHHHHHTTCCCBCTTE--EEEEEESSE
T ss_pred cchHHHHHhhhceecc-CCce-EEecccc-C-----CCCCeEEECchhcCcHHHHHHhcCCCCCChhhC--CEEEEecce
Confidence 9999887765543211 0000 10 1110 0 01122 1211 11211 1122211 12211 244555557
Q ss_pred EECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEeeeEEC
Q 009971 424 CISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIID 473 (521)
Q Consensus 424 ~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~ 473 (521)
+.|.++++.+.+++.++ ...++.|.++++++|.+|.
T Consensus 447 ~fg~~v~l~G~v~i~~~--------------~g~~~~ip~g~~l~~~~~~ 482 (484)
T 3gue_A 447 EFGADVSVRGNVVIKNL--------------KEEPLIIGSGRVLDNEVVV 482 (484)
T ss_dssp EECTTCEEEEEEEEEEC--------------SSSCEEECTTCEEESCEEE
T ss_pred EECCCcEEEEEEEEEcC--------------CCCeeecCCCCEecceecC
Confidence 77777778777766431 1224788888888887763
No 161
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.33 E-value=5.4e-07 Score=85.32 Aligned_cols=31 Identities=26% Similarity=0.374 Sum_probs=16.2
Q ss_pred eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 469 RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 469 ~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
+++||++|.||.+++|.. +++||++++|++|
T Consensus 111 ~v~IG~~v~IG~~a~I~~------gv~IG~~~iIgag 141 (212)
T 3eev_A 111 DTIIGHDVWIGTEAMIMP------GVKIGHGAIIASR 141 (212)
T ss_dssp CEEECSSCEECTTCEECT------TCEECTTCEECTT
T ss_pred CeEECCCCEECCCCEEcC------CCEECCCCEECCC
Confidence 455555555555555543 3445555555555
No 162
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.32 E-value=1e-06 Score=86.89 Aligned_cols=79 Identities=23% Similarity=0.349 Sum_probs=34.8
Q ss_pred eEECCCcEEceeEEeeeEECCCCEECCCCEEcceEEECCccccccccccccccCCCcceeeCCCCEEe-eeEECCCCEEC
Q 009971 401 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKNARIG 479 (521)
Q Consensus 401 ~~Ig~~~~I~~~~I~~s~ig~~~~Ig~~~~I~~s~i~~~~~~e~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~~Ig 479 (521)
+.||++++|+.. .+++||++|.||++|.|...+.+++...+.. .+.+.||+++ .||.++.|. ++.||++|+||
T Consensus 164 a~IG~gv~I~~g--~gvvIG~~~~IG~~v~I~~gvtLg~~~~~~~-~~~~~IGd~v---~IGaga~Ilggv~IG~~a~IG 237 (289)
T 1t3d_A 164 AKIGRGIMLDHA--TGIVVGETAVIENDVSILQSVTLGGTGKSGG-DRHPKIREGV---MIGAGAKILGNIEVGRGAKIG 237 (289)
T ss_dssp CEECSSCEECSC--TTCEECTTCEECSSCEECTTCEEECCSSSCS-SCSCEECTTC---EECTTCEEESSCEECTTCEEC
T ss_pred CEEcCCEEECCC--CceEECCCcEECCCCEEcCCcEECCCccccC-CCCeEECCCe---EECCCCEEecCcEECCCCEEC
Confidence 345566666520 1345555555555555554443332111100 1233344443 444444443 44455555555
Q ss_pred CCcEEe
Q 009971 480 DNVKIV 485 (521)
Q Consensus 480 ~~~~i~ 485 (521)
+++++.
T Consensus 238 agsvV~ 243 (289)
T 1t3d_A 238 AGSVVL 243 (289)
T ss_dssp TTCEEC
T ss_pred CCCEEc
Confidence 554443
No 163
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.21 E-value=2.7e-06 Score=80.48 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=20.0
Q ss_pred eeeCCCCEEe-eeEECCCCEECCCcEEeCCCccC
Q 009971 459 IGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQ 491 (521)
Q Consensus 459 ~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~ 491 (521)
+.||++|.|. +|+|.++++||++|+|.....+.
T Consensus 112 v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~ 145 (212)
T 3eev_A 112 TIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVT 145 (212)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCCEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 5666666665 66666666666666666544444
No 164
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.20 E-value=1.1e-06 Score=83.51 Aligned_cols=31 Identities=26% Similarity=0.388 Sum_probs=19.4
Q ss_pred eeEECCCCEECCCcEEeCCCccCCceeecCCeEEcCC
Q 009971 469 RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 505 (521)
Q Consensus 469 ~~ii~~~~~Ig~~~~i~~~~~~~~~~~~~~~~~I~~g 505 (521)
+++||++|.||.+++|.. +.++|++++|++|
T Consensus 118 ~v~Igd~v~IG~~a~I~~------gv~IG~~~~Igag 148 (219)
T 4e8l_A 118 DIEIGNDVWIGRDVTIMP------GVKIGDGAIIAAE 148 (219)
T ss_dssp CEEECSSCEECTTCEECT------TCEECTTCEECTT
T ss_pred CcEECCCeEECCCCEEcC------CCEECCCCEECCC
Confidence 566777777777766654 3455556666655
No 165
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.16 E-value=1.1e-06 Score=83.14 Aligned_cols=17 Identities=29% Similarity=0.407 Sum_probs=13.5
Q ss_pred eeeEECCCCEECCCCEE
Q 009971 415 HHSVVGLRSCISEGAII 431 (521)
Q Consensus 415 ~~s~ig~~~~Ig~~~~I 431 (521)
....||++|.|+++|+|
T Consensus 55 ~~i~IG~~~~Ig~~v~i 71 (212)
T 1xat_A 55 DKLVIGSFCSIGSGAAF 71 (212)
T ss_dssp CCEEECSSCEECTTCEE
T ss_pred cCEEEcCCCEECCCCEE
Confidence 46788888888888876
No 166
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.15 E-value=1.9e-06 Score=81.37 Aligned_cols=16 Identities=25% Similarity=0.322 Sum_probs=11.2
Q ss_pred eeEECCCCEECCCCEE
Q 009971 416 HSVVGLRSCISEGAII 431 (521)
Q Consensus 416 ~s~ig~~~~Ig~~~~I 431 (521)
.++||++|.|+++++|
T Consensus 60 ~v~IG~~~~Ig~gv~I 75 (209)
T 1mr7_A 60 KLKIGKFCSIGPGVTI 75 (209)
T ss_dssp CEEECSSCEECTTCEE
T ss_pred CEEECCCCEEcCCCEE
Confidence 3677777777777766
No 167
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.09 E-value=1.2e-05 Score=75.96 Aligned_cols=38 Identities=8% Similarity=-0.052 Sum_probs=24.2
Q ss_pred cceEECCCcEEce----eEEeeeEE--------CCCCEECCCCEEcceEE
Q 009971 399 TDSVIGEGCVIKN----CKIHHSVV--------GLRSCISEGAIIEDTLL 436 (521)
Q Consensus 399 ~~~~Ig~~~~I~~----~~I~~s~i--------g~~~~Ig~~~~I~~s~i 436 (521)
.+..||++++|.. |.+.++++ ...+.||++|.|...+.
T Consensus 21 ~~I~IG~~~~I~~~~~~~~~~~~v~~~~~~~~~~~~i~IG~~~~Ig~~v~ 70 (212)
T 1xat_A 21 PNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAA 70 (212)
T ss_dssp TTEEECTTCEECCTTTCCCGGGGEETCCSSCSSSCCEEECSSCEECTTCE
T ss_pred CCEEEcCCeEECCcccCccccceeEeeccccCcccCEEEcCCCEECCCCE
Confidence 3556777777763 33334444 46788888888886654
No 168
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.04 E-value=3.4e-06 Score=80.12 Aligned_cols=33 Identities=30% Similarity=0.410 Sum_probs=19.4
Q ss_pred eeeCCCCEEe-eeEECCCCEECCCcEEeCCCccC
Q 009971 459 IGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQ 491 (521)
Q Consensus 459 ~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~~~ 491 (521)
+.||+++.|. +++|..+++||++++|.....+.
T Consensus 119 v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~ 152 (219)
T 4e8l_A 119 IEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVT 152 (219)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cEECCCeEECCCCEEcCCCEECCCCEECCCCEEc
Confidence 4566666665 56666666666666665544443
No 169
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=97.93 E-value=5.7e-06 Score=78.08 Aligned_cols=37 Identities=11% Similarity=0.038 Sum_probs=24.8
Q ss_pred cceEECCCcEEce--------eEEe-eeEECCCCEECCCCEEcceE
Q 009971 399 TDSVIGEGCVIKN--------CKIH-HSVVGLRSCISEGAIIEDTL 435 (521)
Q Consensus 399 ~~~~Ig~~~~I~~--------~~I~-~s~ig~~~~Ig~~~~I~~s~ 435 (521)
.++.||++++|++ +.+. .+.++.++.||++|.|+..+
T Consensus 28 ~~i~IG~~~~I~~~~~~~i~~~~i~~~~~i~~~v~IG~~~~Ig~gv 73 (209)
T 1mr7_A 28 ENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGV 73 (209)
T ss_dssp TTEEECTTCEEECSSSCCGGGGEESCCGGGCCCEEECSSCEECTTC
T ss_pred CCeEECCCcEEcCCCceEEeceEEeeccccCCCEEECCCCEEcCCC
Confidence 3566777777764 2333 24457778999999998665
No 170
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.37 E-value=0.0072 Score=64.94 Aligned_cols=215 Identities=13% Similarity=0.137 Sum_probs=121.0
Q ss_pred ccEEEEEEeCCCCCCCCccccCCCccceecC---CCcchhHHHHHHhHh-CCC-ceEEEEecCC-hHHHHHHHHHhhhcc
Q 009971 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLG---ANYRLIDIPVSNCLN-SNI-SKIYVLTQFN-SASLNRHLSRAYASN 161 (521)
Q Consensus 88 ~~~~aVILAaG~GtRl~PlT~~~PK~LlpI~---G~~pLI~~~l~~l~~-~gi-~~I~Iv~~~~-~~~i~~~l~~~~~~~ 161 (521)
.++..|+||||.||||+ ...||.++|++ |+ +++++.++++.+ .|. -..+|.+.++ .+...++|.+ |...
T Consensus 113 ~kvavvllaGGlGTRLG---~~~pK~~lpv~~~s~k-s~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~-fgl~ 187 (630)
T 3ogz_A 113 CKTVFVLVAGGLGERLG---YSSIKVSLPVETATNT-TYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRE-LQLE 187 (630)
T ss_dssp GGEEEEEECCCEEGGGT---EEEEGGGSBSCTTTCC-BHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHH-TTCC
T ss_pred hhceEEEecCCcccccC---CCCCcccceecCCCCC-cHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHH-hCCC
Confidence 58999999999999998 57899999995 65 999999999975 343 2456666644 5889999988 4332
Q ss_pred CC--CCcCCCcEEEeeccc------CCCCCCC-CCChHHHHHH-----------------------HHHHhhhcCcceEE
Q 009971 162 MG--GYKNEGFVEVLAAQQ------SPENPNW-FQGTADAVRQ-----------------------YLWLFEEHNVLEFL 209 (521)
Q Consensus 162 ~~--~~~~~~~v~vl~~~q------~~~~~~~-~~Gt~~al~~-----------------------~~~~l~~~~~~~~L 209 (521)
.. ..|.++.+..+.... .+....| +.|.++-... .++.+.....+++.
T Consensus 188 ~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~ 267 (630)
T 3ogz_A 188 VPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIV 267 (630)
T ss_dssp CTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEE
T ss_pred cccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEE
Confidence 10 012222222221100 0001112 4566653332 22333334578999
Q ss_pred EEeCCe-eccccHHHHHHHHHhcCCcEEEEEEecCcccCcceeEEEe--CCCCCe-----EEeeeCCChhhhhhcccccc
Q 009971 210 VLAGDH-LYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKI--DEEGRI-----IEFSEKPKGEQLKAMKVDTT 281 (521)
Q Consensus 210 vl~gD~-l~~~dl~~ll~~h~~~~aditi~~~~~~~~~~~~~g~v~~--d~~grV-----~~i~ekp~~~~~~~~~~~~~ 281 (521)
+.+.|. |...---.++-.+.++++++.+-+.+... ...-|.+.. ..+|+. ++|.|-+..... .. +..
T Consensus 268 v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p--~E~vG~l~~~~~~dGk~~~v~vVEYsei~~~~~~--~~-~~~ 342 (630)
T 3ogz_A 268 FIQDTNAGATITIPISLALSAEHSLDMNFTCIPRVP--KEPIGLLCRTKKNSGDPWLVANVEYNVFAEVSRA--LN-KDG 342 (630)
T ss_dssp EECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCCS--SCSSCEEEEEESSTTSCCEEEEECHHHHHHHHHH--C-----
T ss_pred EEccCCccccccCHHHhHHHHhcCCCEEEEEEECCC--CcceeeEEEEecCCCceeeeeEEEeccCCHhHhh--cc-CCC
Confidence 999999 54433334778888889998777665322 233454443 235555 454443221110 00 000
Q ss_pred cccC-CchhhccCCceeeEEEEEEeHHHHHHHHh
Q 009971 282 ILGL-DDERAKEMPYIASMGIYVISKDVMLNLLR 314 (521)
Q Consensus 282 ~~~~-~~~~~~~~~~l~~~GIyifs~~vl~~ll~ 314 (521)
+. .......+.+..++..++|+-+.+.+.+.
T Consensus 343 --g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~ 374 (630)
T 3ogz_A 343 --GDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLR 374 (630)
T ss_dssp ----------CCCSSCEEEEEEEEEHHHHHHHHH
T ss_pred --ccccccccccccccccceeeeEEHHHHHHHHH
Confidence 00 00011123345689999999875555554
No 171
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=96.57 E-value=0.0052 Score=57.39 Aligned_cols=105 Identities=15% Similarity=0.220 Sum_probs=69.9
Q ss_pred ccEEEEEEe--CCCCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceE-EEEecCChHHHHHHHHHhhhccCCC
Q 009971 88 RSVLGIILG--GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKI-YVLTQFNSASLNRHLSRAYASNMGG 164 (521)
Q Consensus 88 ~~~~aVILA--aG~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I-~Iv~~~~~~~i~~~l~~~~~~~~~~ 164 (521)
+.|.+||++ +...|||.|.- -|.....+ |+ |||+|+++.+..++++++ ++++++... .+ + +
T Consensus 2 ~~~~~vip~k~g~~KtRL~~~l--~~~~~~~l-~~-~ll~~vl~~l~~~~~~~v~vvv~~~~~~--~~-----~-~---- 65 (211)
T 2i5e_A 2 NAMRAVIPYKKAGAKSRLSPVL--SLQEREEF-VE-LMLNQVISSLKGAGIEQVDILSPSVYGL--EE-----M-T---- 65 (211)
T ss_dssp CCCEEEEECCCTTTTGGGTTTS--CHHHHHHH-HH-HHHHHHHHHHHHTTCSEEEEEESSCTTC--SS-----C-C----
T ss_pred CceEEEEEeCCCCCccccCccC--CHHHHHHH-HH-HHHHHHHHHHHHcCCceEEEEEcCcHHH--Hh-----h-c----
Confidence 358899999 66778887410 11122234 55 999999999999999999 888875431 11 0 1
Q ss_pred CcCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe-ecc-ccHHHHHH
Q 009971 165 YKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQ 226 (521)
Q Consensus 165 ~~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~ 226 (521)
+ ++++. + + .|.++++..+...+ .+.++++.||+ +.+ ..+..+++
T Consensus 66 ----~-~~~v~--~----~---~gl~~sl~~a~~~~----~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 66 ----E-ARVLL--D----E---KDLNEALNRYLKEA----EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp ----S-SEEEE--C----C---SCHHHHHHHHHHHC----CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred ----C-CEEEE--C----C---CCHHHHHHHHHHhc----CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 1 23332 1 1 57888998887654 26899999999 555 44777765
No 172
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=87.86 E-value=2.2 Score=40.38 Aligned_cols=116 Identities=9% Similarity=-0.051 Sum_probs=70.6
Q ss_pred cEEEEEEeC----C-CCCCCCccccCCCccceecCCCcchhHHHHHHhHhCCCceEEEEecCChHHH---HHHHHHhhhc
Q 009971 89 SVLGIILGG----G-AGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASL---NRHLSRAYAS 160 (521)
Q Consensus 89 ~~~aVILAa----G-~GtRl~PlT~~~PK~LlpI~G~~pLI~~~l~~l~~~gi~~I~Iv~~~~~~~i---~~~l~~~~~~ 160 (521)
+...||++= | .-|||.|. --+..-..+. .+|+.++++.+...+...++++++.....+ ...+..
T Consensus 4 ~~~liv~~K~P~~g~~KTRL~~~--l~~~~aa~l~--~~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~~~---- 75 (242)
T 3cgx_A 4 ESCILFFVKYPEPGKVKTRLGEV--VGNDKAAMLY--RHFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWLGP---- 75 (242)
T ss_dssp SEEEEEEECCCCTTTSCHHHHHH--HCHHHHHHHH--HHHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHHCT----
T ss_pred CCEEEEEeCCCCCCCcccccCcc--CCHHHHHHHH--HHHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhccC----
Confidence 334555553 2 33676642 0122233343 489999999999998888877777655443 222211
Q ss_pred cCCCCcCCCcEEEeecccCCCCCCCCCChHHHHHHHHHHhhhcCcceEEEEeCCe--eccccHHHHHHHHH
Q 009971 161 NMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH--LYRMDYERFIQAHR 229 (521)
Q Consensus 161 ~~~~~~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~--l~~~dl~~ll~~h~ 229 (521)
. +.+.. | |..|.+.++..++..+-....+.++++.+|+ |...++.++++.+.
T Consensus 76 --------~-~~~~~--q------~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~ 129 (242)
T 3cgx_A 76 --------Q-HMFAA--Q------QGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQ 129 (242)
T ss_dssp --------T-SEEEE--C------CSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTT
T ss_pred --------C-cEEec--C------CCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhc
Confidence 1 11221 2 1267889999988654222346899999999 55567888887654
No 173
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=84.71 E-value=8.1 Score=35.27 Aligned_cols=99 Identities=15% Similarity=0.119 Sum_probs=60.1
Q ss_pred chhHHHHHHhHhCCCc--eEEEEecCChHHHHHHHHHhhhccCCCCcCCCcEEEeecccCCCCCCCCCChHHHHHHHHHH
Q 009971 122 RLIDIPVSNCLNSNIS--KIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWL 199 (521)
Q Consensus 122 pLI~~~l~~l~~~gi~--~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~~ 199 (521)
..|...|+.+.+.... +|+||-+...+...+.+.+-.. ....+.++.. .+ .|.+.+...++..
T Consensus 18 ~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~-------~~~~i~~i~~----~n----~G~~~a~N~g~~~ 82 (240)
T 3bcv_A 18 KYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAA-------QYPNIKVIHK----KN----AGLGMACNSGLDV 82 (240)
T ss_dssp TTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHH-------HCSSEEEEEC----CC----CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHh-------hCCCEEEEEC----CC----CChHHHHHHHHHH
Confidence 5677888888765432 5666644222222222222100 0112555532 12 7888888888766
Q ss_pred hhhcCcceEEEEeCCeecccc-HHHHHHHHHhcCCcEEEE
Q 009971 200 FEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDADITVA 238 (521)
Q Consensus 200 l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~aditi~ 238 (521)
.+ .+.++++..|.+...+ +..+++...+.+.++.+.
T Consensus 83 a~---g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~ 119 (240)
T 3bcv_A 83 AT---GEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFT 119 (240)
T ss_dssp CC---SSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC
T ss_pred cC---CCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEE
Confidence 54 4789999999987766 888888887767775443
No 174
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=79.25 E-value=35 Score=31.20 Aligned_cols=99 Identities=12% Similarity=0.142 Sum_probs=60.4
Q ss_pred cchhHHHHHHhHhCCCc--eEEEEecCChHHHHHHHHHhhhccCCCCcCCCcEEEeecccCC-----CCCCCCCChHHHH
Q 009971 121 YRLIDIPVSNCLNSNIS--KIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSP-----ENPNWFQGTADAV 193 (521)
Q Consensus 121 ~pLI~~~l~~l~~~gi~--~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~q~~-----~~~~~~~Gt~~al 193 (521)
...|...|+.+.+.... +|+|+-+...+...+.+.+-.. ...+.++...... . ..|.+.+.
T Consensus 13 ~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~--------~~~i~~i~~~~~~~~~~~~----n~G~~~a~ 80 (255)
T 1qg8_A 13 SDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN--------DNRVRFYQSDISGVKERTE----KTRYAALI 80 (255)
T ss_dssp TTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG--------STTEEEEECCCCSHHHHHS----SCHHHHHH
T ss_pred HHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh--------cCCEEEEeccccccccccc----ccCHHHHH
Confidence 36788888888765443 5666655444555555554111 1225555332000 1 16777777
Q ss_pred HHHHHHhhhcCcceEEEEeCCeecccc-HHHHHHHHHhc-CCc
Q 009971 194 RQYLWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRET-DAD 234 (521)
Q Consensus 194 ~~~~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~-~ad 234 (521)
..++...+ .+.++++.+|.+...+ +..+++...+. +.+
T Consensus 81 N~gi~~a~---g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~ 120 (255)
T 1qg8_A 81 NQAIEMAE---GEYITYATDDNIYMPDRLLKMVRELDTHPEKA 120 (255)
T ss_dssp HHHHHHCC---CSEEEEEETTEEECTTHHHHHHHHHHHCTTCC
T ss_pred HHHHHHcC---CCEEEEeCCCCccChHHHHHHHHHHHhCCCce
Confidence 77776543 5789999999987766 88888887665 344
No 175
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=60.48 E-value=1.1e+02 Score=30.98 Aligned_cols=98 Identities=13% Similarity=0.056 Sum_probs=58.2
Q ss_pred chhHHHHHHhHhCCC----ceEEEEecCChH-HHHHHHHHhhhccCCCCcCCCcEEEeecccCCCCCCCCCChHHHHHHH
Q 009971 122 RLIDIPVSNCLNSNI----SKIYVLTQFNSA-SLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQY 196 (521)
Q Consensus 122 pLI~~~l~~l~~~gi----~~I~Iv~~~~~~-~i~~~l~~~~~~~~~~~~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~ 196 (521)
..|...|+.+.+.-. .+|+||-....+ ...+.+.+-.. . .. ..+.++.... ..|-+.+...+
T Consensus 43 ~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~-~----~~-~~v~vi~~~~-------n~G~~~a~N~g 109 (472)
T 1xhb_A 43 STLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVK-K----LK-VPVHVIRMEQ-------RSGLIRARLKG 109 (472)
T ss_dssp HHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHH-S----SS-SCEEEEECSS-------CCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHH-H----CC-CcEEEEECCC-------CCChHHHHHHH
Confidence 466677777766432 377777643332 23333333100 0 01 1255554321 16888888888
Q ss_pred HHHhhhcCcceEEEEeCCeecccc-HHHHHHHHHhcCCcE
Q 009971 197 LWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDADI 235 (521)
Q Consensus 197 ~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~adi 235 (521)
+.... .+.++++.+|.....+ +..+++...+....+
T Consensus 110 ~~~A~---gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 110 AAVSR---GQVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp HHHCC---SSEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred HHhcc---CCeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 76554 4789999999987766 888988887665443
No 176
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=49.48 E-value=1.1e+02 Score=32.24 Aligned_cols=96 Identities=7% Similarity=-0.013 Sum_probs=58.4
Q ss_pred chhHHHHHHhHhCC---CceEEEEecCChHHHHHHHHHhhhccCCCCcCCCcEEEeecccCCCCCCCCCChHHHHHHHHH
Q 009971 122 RLIDIPVSNCLNSN---ISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLW 198 (521)
Q Consensus 122 pLI~~~l~~l~~~g---i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~ 198 (521)
..|...|+.+.... --+|+||-+...+...+.+.+ +. ....+.++.... . ..|-+.++..++.
T Consensus 106 ~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~-~~-------~~~~i~~i~~~~--~----~~g~~~a~N~g~~ 171 (625)
T 2z86_A 106 KILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVRE-FE-------SLLNIKYVRQKD--Y----GYQLCAVRNLGLR 171 (625)
T ss_dssp HHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHT-TT-------TTSCEEEEEECC--C----SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHH-hh-------hcCCeEEEEeCC--C----CcchhHHHHHHHH
Confidence 46778888887652 346777765444444555544 11 011244443211 0 1457778877776
Q ss_pred HhhhcCcceEEEEeCCeecccc-HHHHHHHHHhcCCc
Q 009971 199 LFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDAD 234 (521)
Q Consensus 199 ~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~ad 234 (521)
... .+.++++.+|.+...+ +..+++.+.+....
T Consensus 172 ~a~---g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~ 205 (625)
T 2z86_A 172 AAK---YNYVAILDCDMAPNPLWVQSYMELLAVDDNV 205 (625)
T ss_dssp HCC---SSEEEEECTTEEECTTHHHHHHHHHHHCTTE
T ss_pred hCC---cCEEEEECCCCCCCHHHHHHHHHHHhcCCce
Confidence 553 4789999999987766 78888877665544
No 177
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=47.23 E-value=1e+02 Score=33.25 Aligned_cols=95 Identities=14% Similarity=0.099 Sum_probs=59.6
Q ss_pred chhHHHHHHhHhC-----CCceEEEEecCCh-----HHHHHHHHHhhhccCCCCcCCCcEEEeecccCCCCCCCCCChHH
Q 009971 122 RLIDIPVSNCLNS-----NISKIYVLTQFNS-----ASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTAD 191 (521)
Q Consensus 122 pLI~~~l~~l~~~-----gi~~I~Iv~~~~~-----~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~q~~~~~~~~~Gt~~ 191 (521)
..|...|+.+.+. ...+|+||=+-.. ..+.+.+.... ..+.++... + .|-+.
T Consensus 193 ~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~----------~~I~vI~~~----N----~G~a~ 254 (657)
T 4fix_A 193 ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG----------SRLSIHDQP----N----LGGSG 254 (657)
T ss_dssp HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG----------GGEEEEECC----C----CHHHH
T ss_pred HHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC----------CCEEEEECC----C----CCHHH
Confidence 5788888888664 2346776654321 13444444321 125555321 2 78888
Q ss_pred HHHHHHHHhhhc-CcceEEEEeCCeecccc-HHHHHHHHHhcCCc
Q 009971 192 AVRQYLWLFEEH-NVLEFLVLAGDHLYRMD-YERFIQAHRETDAD 234 (521)
Q Consensus 192 al~~~~~~l~~~-~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~ad 234 (521)
+...++...... ..+.+++++.|.+...+ +..+++........
T Consensus 255 a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~ 299 (657)
T 4fix_A 255 GYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAP 299 (657)
T ss_dssp HHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSC
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCc
Confidence 888777655332 35789999999988766 88888888766444
No 178
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=45.81 E-value=1.4e+02 Score=31.55 Aligned_cols=93 Identities=22% Similarity=0.250 Sum_probs=57.0
Q ss_pred cchhHHHHHHhHhCCCc--eEEEEecCChHHHHHHHHHhhhccCCCCcCCCcEEEeecccCCCCCCCCCChHHHHHHHHH
Q 009971 121 YRLIDIPVSNCLNSNIS--KIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLW 198 (521)
Q Consensus 121 ~pLI~~~l~~l~~~gi~--~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~~ 198 (521)
...|...|+.+.+.... +|+|+-+...+...+.+.+... ....+.++... + .|-+.+...++.
T Consensus 387 ~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~-------~~~~i~~~~~~----n----~G~~~a~n~g~~ 451 (625)
T 2z86_A 387 SKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYA-------NHPRVRFISQK----N----KGIGSASNTAVR 451 (625)
T ss_dssp TTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHT-------TCTTEEEEEEC----C----CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHh-------hCCcEEEEeCC----C----CCHHHHHHHHHH
Confidence 36788888888765332 5666654333333344433111 01225555321 2 688888888876
Q ss_pred HhhhcCcceEEEEeCCeecccc-HHHHHHHHHhc
Q 009971 199 LFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRET 231 (521)
Q Consensus 199 ~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~ 231 (521)
... .+.++++.+|.+...+ +..+++...+.
T Consensus 452 ~a~---g~~i~~ld~D~~~~~~~l~~~~~~~~~~ 482 (625)
T 2z86_A 452 LCR---GFYIGQLDSDDFLEPDAVELCLDEFRKD 482 (625)
T ss_dssp HCC---SSEEEECCTTCEECTTHHHHHHHHHHHC
T ss_pred hcC---CCEEEEECCCcccChhHHHHHHHHHHhC
Confidence 554 4789999999977766 88888776554
No 179
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=41.36 E-value=1.7e+02 Score=30.66 Aligned_cols=94 Identities=13% Similarity=0.062 Sum_probs=56.3
Q ss_pred chhHHHHHHhHhCCC-c---eEEEEecCChH-HHHHHHHHhhhccCCCCcCCCcEEEeecccCCCCCCCCCChHHHHHHH
Q 009971 122 RLIDIPVSNCLNSNI-S---KIYVLTQFNSA-SLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQY 196 (521)
Q Consensus 122 pLI~~~l~~l~~~gi-~---~I~Iv~~~~~~-~i~~~l~~~~~~~~~~~~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~ 196 (521)
..|...|+.+.+... . +|+||-....+ .+.+.+.+-.. ....+.++.... ..|-+.+...+
T Consensus 126 ~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~-------~~~~v~vi~~~~-------n~G~~~A~N~G 191 (570)
T 2d7i_A 126 SSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMA-------LFPSVRILRTKK-------REGLIRTRMLG 191 (570)
T ss_dssp HHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHT-------TSTTEEEEECSS-------CCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHH-------hCCeEEEEECCC-------CCCHHHHHHHH
Confidence 467777777765322 2 67777543322 22333333110 012255654321 16888888888
Q ss_pred HHHhhhcCcceEEEEeCCeecccc-HHHHHHHHHhcC
Q 009971 197 LWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETD 232 (521)
Q Consensus 197 ~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~ 232 (521)
+.... .+.++++.+|..+..+ +..+++...+..
T Consensus 192 ~~~A~---gd~i~fLD~D~~~~p~~L~~ll~~l~~~~ 225 (570)
T 2d7i_A 192 ASVAT---GDVITFLDSHCEANVNWLPPLLDRIARNR 225 (570)
T ss_dssp HHHCC---SSEEEECCSSEEECTTCSHHHHHHHHHCT
T ss_pred HHhcC---CCEEEEEcCCccccccHHHHHHHHHHhCC
Confidence 76654 4789999999977766 888888876654
No 180
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=40.31 E-value=1.7e+02 Score=29.94 Aligned_cols=91 Identities=12% Similarity=0.074 Sum_probs=55.6
Q ss_pred hhHHHHHHhHhCCC----ceEEEEecCCh-HHHHHHHHHhhhccCCCCcCCCcEEEeecccCCCCCCCCCChHHHHHHHH
Q 009971 123 LIDIPVSNCLNSNI----SKIYVLTQFNS-ASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYL 197 (521)
Q Consensus 123 LI~~~l~~l~~~gi----~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~q~~~~~~~~~Gt~~al~~~~ 197 (521)
.|...|+.+.+.-. -+|+||-.... ..+...+.+ ...+.++.... ..|-+.+...++
T Consensus 81 ~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~-----------~~~v~vi~~~~-------n~G~~~A~N~G~ 142 (501)
T 2ffu_A 81 ALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGK-----------IEKVRVLRNDR-------REGLMRSRVRGA 142 (501)
T ss_dssp HHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGG-----------BTTEEEEECSS-------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhc-----------CCCEEEEECCC-------CcCHHHHHHHHH
Confidence 56666777654322 26777754332 333333322 11255554221 167888888877
Q ss_pred HHhhhcCcceEEEEeCCeecccc-HHHHHHHHHhcCCc
Q 009971 198 WLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDAD 234 (521)
Q Consensus 198 ~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~ad 234 (521)
.... .+.++++.+|.....+ +..+++...+....
T Consensus 143 ~~A~---gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 143 DAAQ---AKVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp HHCC---SSEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred HhcC---CCEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 6654 4788999999977766 89999888776554
No 181
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=34.95 E-value=1.8e+02 Score=27.91 Aligned_cols=50 Identities=8% Similarity=-0.012 Sum_probs=35.9
Q ss_pred CChHHHHHHHHHHhhhcCcceEEEEeCCee-cccc-HHHHHHHHHh-cCCcEEEEE
Q 009971 187 QGTADAVRQYLWLFEEHNVLEFLVLAGDHL-YRMD-YERFIQAHRE-TDADITVAA 239 (521)
Q Consensus 187 ~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l-~~~d-l~~ll~~h~~-~~aditi~~ 239 (521)
.|-+.++..++.... .+.++++.+|.+ +..+ +..+++...+ .+.+++...
T Consensus 117 ~G~~~a~n~g~~~a~---gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~ 169 (329)
T 3ckj_A 117 PGKGEALWRSLAASR---GDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSF 169 (329)
T ss_dssp CSHHHHHHHHHHHCC---CSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEE
T ss_pred CCHHHHHHHHHHhCC---CCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEE
Confidence 788888888876554 478999999998 7766 8888877544 345544443
No 182
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=28.56 E-value=2.1e+02 Score=28.52 Aligned_cols=51 Identities=20% Similarity=0.143 Sum_probs=38.0
Q ss_pred CChHHHHHHHHHHhhhcCcceEEEEeCCee-cccc-HHHHHHHHHhc-CCcEEEEEE
Q 009971 187 QGTADAVRQYLWLFEEHNVLEFLVLAGDHL-YRMD-YERFIQAHRET-DADITVAAL 240 (521)
Q Consensus 187 ~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l-~~~d-l~~ll~~h~~~-~aditi~~~ 240 (521)
.|-+.++..++.... .+.++++.+|.. ...+ +..+++...+. +.+++....
T Consensus 165 ~G~g~A~n~G~~~A~---gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 165 HGKGDAMWRALSVTR---GDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp CSHHHHHHHHTTTCC---SSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred CCHHHHHHHHHHhcC---CCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 788889888875543 478889999998 6655 88888887665 577666654
No 183
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=24.89 E-value=76 Score=29.77 Aligned_cols=23 Identities=4% Similarity=0.004 Sum_probs=17.0
Q ss_pred chhHHHHHHhHhCCCceEEEEec
Q 009971 122 RLIDIPVSNCLNSNISKIYVLTQ 144 (521)
Q Consensus 122 pLI~~~l~~l~~~gi~~I~Iv~~ 144 (521)
|-+.-.++.|...|+++|+|+--
T Consensus 65 P~i~~al~~l~~~G~~~ivV~Pl 87 (269)
T 2xvy_A 65 PSPAEALAGMAEEGFTHVAVQSL 87 (269)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCHHHHHHHHHHCCCCEEEEEec
Confidence 77777777777777777776643
Done!